Citrus Sinensis ID: 016833

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380--
Protein Sequence
MFGRAPKKSDNTKYYEILGVSKKRFVLSDPEKREIYDQYGEDALKEGMGGGGGAHDPFDIFQSFFGGSPFGGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRKQQAAQEAYDEDDDMQGGAQRVQCAQQ
Secondary Structure (PSIPRED)
cccccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccccccccccccHHHcccccccccccccccccccccccEEEEEEEcHHHHHcccEEEEEEEcEEEccccccccccccccccccccccccEEEEEEEEccccEEEEEEEccccccEEEEEcccccccccccccEEEEEEEEEEEEccccccccEEEEccccccccccccccEEEEEEEccccccEEEcccEEEEEEccHHHHccccEEEEEcccccEEEEEEccccccccccEEEEccccccccccccccccEEEEEEEEccccccHHHHHHHHHHccccccccccccccccEEEEccccccHHHHHHHHHHHHcccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHcccccccccccccccccccccEEEEEEEEHHHHHcccEEEEEEccEEEccccccccccccccccccccccccEEEEEEEccccHHEEEEccccccccccEEEccccccccccccEEEEEEEEEEEEEccccccccEEEEccccccccccccccEEEEEEEcccccEEEccccEEEEEEEEHHHHHcccEEEEEcccccEEEEEEccccEEccccEEEEccccccccccccccccEEEEEEEEccccccHHHHHHHHHHccccccccccccccccccEEEEEcccHHHHHHHcccccccccccccccccccccEEEccc
Coil and Loop (DISEMBL)
mfgrapkksdntkyyEILGvskkrfvlsdpekrEIYDQYGEDalkegmgggggahdpfdifqsffggspfgggssrgrrqrrgedvihpLKVSLEDLyngtskklslsrnvictkckgkgsksgasmkcsgcqgsgmkvsirhlgpsmiqqmqhpcneckgtgetindkdrcpqckgekviqEKKVLEVIVEKGmqngqkitfpgeadeapdtvtGDIVFVLQqkehpkfkrkgddlFVEHTLSLTEALCGFQFVIthldgrqlliksqpgevvkpdqfkaindegmpmyqrpfmrgklyihftvdfpeslspdqckmletvlpprtsvqltdmeldeceettlhdvNIEEEMRRKQQAAQEaydedddmqggaqrVQCAQQ
Flexible Loop (DISEMBL)
mfgrapkksdntkyyeilgvskkrfvlsdpekREIYDQYGEDALKEGMGGGGGAHDPFDIFQSFFGGSPFGGGSSRGRRQRRGEDVIHPLKVSLEDLyngtskklslsrnvICTKckgkgsksgasmkcsgCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTgetindkdrcpqckgekviqekkVLEVIVEKGmqngqkitfpgeadeapdTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIksqpgevvkpdqfkaindegmPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETtlhdvnieeeMRRKQQAAQEAYDEDDDMQGGAQRVQCAQQ
Low Complexity Region (SEG)
MFGRAPKKSDNTKYYEILGVSKKRFVLSDPEKREIYDQYGEDALKEgmgggggAHDPFDIfqsffggspfgggssrgrrqrrgEDVIHPLKVSLEDLYNGTSKKLSLSRNVIctkckgkgsksgasmkcsgcQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRKqqaaqeaydedddmqGGAQRVQCAQQ
Disordered region (IsUnstruct)
*************YYEILGVSKKRFVL*********************************F**F**********************IHPLKVSLEDLYNGTSKKLSLSRNVICTKC*********************************************************QCKGEKVIQEKKVLEVIVEKGMQN**KITF********DTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVL***********************************************************
Disordered Region (DISOPRED)
*FGRAPKKSDNTKYYEILGVSKKRFVLSDPEKREIYDQ*********************IFQSF*************************LKVSLEDLYNGTSKKLSLSRNVICTKCKG*GS**GAS*KCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG**DE*PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVL***************CEETTL**************************************
Disordered Region (DISEMBL)
*********DNTKYYEILGVSKKRFVLSDPEKREIYDQYGEDALKEGMGGGGGAHDPFDIFQSFFGGSPFG***********GEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCK***************QGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEE******************************
Disordered Region (DISPRO)
*F*RAPKKSDNTKYYEILGVSKKRFVLSDPEKREIYDQYGEDALKEGMGGGGGAHDPFDIFQSFFGGSPF***********RGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKS*ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEE******************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MFGRAPKKSDNTKYYEILGVSKKRFVLSDPEKREIYDQYGEDALKEGMGGGGGAHDPFDIFQSFFGGSPFGGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRKQQAAQEAYDEDDDMQGGAQRVQCAQQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	382	2.2.26 [Sep-21-2011]
Q04960	413	DnaJ protein homolog OS=C	N/A	no	0.989	0.915	0.832	0.0
P43644	417	DnaJ protein homolog ANJ1	N/A	no	0.997	0.913	0.806	1e-180
P42825	419	Chaperone protein dnaJ 2	yes	no	0.997	0.909	0.738	1e-172
P42824	418	DnaJ protein homolog 2 OS	N/A	no	1.0	0.913	0.796	1e-172
Q94AW8	420	Chaperone protein dnaJ 3	no	no	1.0	0.909	0.764	1e-167
Q03363	397	DnaJ protein homolog 1 (F	N/A	no	0.934	0.899	0.860	1e-165
Q5E954	397	DnaJ homolog subfamily A	yes	no	0.903	0.869	0.497	3e-89
P31689	397	DnaJ homolog subfamily A	yes	no	0.903	0.869	0.497	3e-89
Q5NVI9	396	DnaJ homolog subfamily A	yes	no	0.900	0.868	0.491	4e-89
Q95JF4	397	DnaJ homolog subfamily A	N/A	no	0.903	0.869	0.494	4e-89

>sp|Q04960|DNJH_CUCSA DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 PE=2 SV=1

 Score =  634 bits (1636), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/417 (83%), Positives = 364/417 (87%), Gaps = 39/417 (9%)

Query: 1   MFGRAPKKSDNTKYYEILGVSK--------------------------KRF--------V 26
           MFGR PKKSDNTKYYEILGVSK                          ++F        V
Sbjct: 1   MFGR-PKKSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEV 59

Query: 27  LSDPEKREIYDQYGEDALKEGMGGGGGAHDPFDIFQSFFGGSPFGGGSSRGRRQRRG-ED 85
           LSDPEKREIYDQYGEDALKEGMGGGG  HDPFDIFQSFFGGSPFGGG S   R++R  ED
Sbjct: 60  LSDPEKREIYDQYGEDALKEGMGGGG-GHDPFDIFQSFFGGSPFGGGGSSRGRRQRRGED 118

Query: 86  VIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLG 145
           VIHPLKVSLEDLYNGTSKKLSLSRNVIC+KCKGKGSKSGASMKC GCQGSGMKVSIRHLG
Sbjct: 119 VIHPLKVSLEDLYNGTSKKLSLSRNVICSKCKGKGSKSGASMKCPGCQGSGMKVSIRHLG 178

Query: 146 PSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 205
           PSMIQQMQHPCNECKGTGETINDKDRC QCKGEKV+QEKKVLEVIVEKGMQN QKITFPG
Sbjct: 179 PSMIQQMQHPCNECKGTGETINDKDRCSQCKGEKVVQEKKVLEVIVEKGMQNAQKITFPG 238

Query: 206 EADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLL 265
           EADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSL E+LCGFQF++THLDGRQLL
Sbjct: 239 EADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLVESLCGFQFILTHLDGRQLL 298

Query: 266 IKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPP 325
           IKS PGEVVKPDQFKAINDEGMPMYQRPFM+GKLYIHF+V+FP+SL+P+QCK LE VLPP
Sbjct: 299 IKSLPGEVVKPDQFKAINDEGMPMYQRPFMKGKLYIHFSVEFPDSLNPEQCKALEGVLPP 358

Query: 326 RTSVQLTDMELDECEETTLHDVNIEEEMRRKQQAAQEAYDEDDDMQGGAQRVQCAQQ 382
           RTSVQL+DMELDECEETTLHDVNIEEEMRRKQ  AQEAYDED+DM GGAQRVQCAQQ
Sbjct: 359 RTSVQLSDMELDECEETTLHDVNIEEEMRRKQ--AQEAYDEDEDMHGGAQRVQCAQQ 413

Have a continuous role in plant development probably in the structural organization of compartments.
Cucumis sativus (taxid: 3659)

>sp|P43644|DNJH_ATRNU DnaJ protein homolog ANJ1 OS=Atriplex nummularia PE=2 SV=1

 Score =  630 bits (1624), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 337/418 (80%), Positives = 364/418 (87%), Gaps = 37/418 (8%)

Query: 1   MFGRAPKKSDNTKYYEILGVSK--------------------------KRF--------V 26
           MFGRAPKKSD+T+YYEILGV K                          ++F        V
Sbjct: 1   MFGRAPKKSDSTRYYEILGVPKDASPEDLKKAYKKAAIKNHPDKGGDPEKFKELAHAYEV 60

Query: 27  LSDPEKREIYDQYGEDALKEGMGGGGGAHDPFDIFQSFFGGSPFGG-GSSRGRRQRRGED 85
           LSDPEKREIYDQYGEDALKEGMGGGGG HDPFDIFQSFFGGSPFGG GSSRGRRQRRGED
Sbjct: 61  LSDPEKREIYDQYGEDALKEGMGGGGGMHDPFDIFQSFFGGSPFGGVGSSRGRRQRRGED 120

Query: 86  VIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLG 145
           V+HPLKVSLEDL+ GT+KKLSLSRNVIC+KC GKGSKSGASMKCSGCQG+GMKVSIRHLG
Sbjct: 121 VVHPLKVSLEDLFTGTTKKLSLSRNVICSKCTGKGSKSGASMKCSGCQGTGMKVSIRHLG 180

Query: 146 PSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 205
           PSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKV+QEKKVLEV+VEKGMQ+GQKITFPG
Sbjct: 181 PSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVVQEKKVLEVVVEKGMQHGQKITFPG 240

Query: 206 EADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLL 265
           EADEAPDTVTGDIVFVLQQKEHPKFKRKG+DLF EHTLSLTEALCGF+FV+THLDGRQLL
Sbjct: 241 EADEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFYEHTLSLTEALCGFRFVLTHLDGRQLL 300

Query: 266 IKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPP 325
           IKS  GEVVKPDQFKAI DEGMP+YQRPFM+GK+YIHFTV+FP+SL+PDQ K LE +LPP
Sbjct: 301 IKSNLGEVVKPDQFKAIEDEGMPIYQRPFMKGKMYIHFTVEFPDSLNPDQVKSLEAILPP 360

Query: 326 RTSVQLTDMELDECEETTLHDVNIEEEMRRKQ-QAAQEAYDEDDDMQGGAQRVQCAQQ 382
           + S+ LT MELDECEETTLH+VNIEEEM+RKQ QA QEAYDEDD+  GG QRVQCAQQ
Sbjct: 361 KPSMSLTYMELDECEETTLHNVNIEEEMKRKQTQAQQEAYDEDDEPAGG-QRVQCAQQ 417

Have a continuous role in plant development probably in the structural organization of compartments.

Atriplex nummularia (taxid: 3553)

>sp|P42825|DNAJ2_ARATH Chaperone protein dnaJ 2 OS=Arabidopsis thaliana GN=ATJ2 PE=1 SV=2

 Score =  603 bits (1556), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 310/420 (73%), Positives = 347/420 (82%), Gaps = 39/420 (9%)

Query: 1   MFGRAP-KKSDNTKYYEILGVSK--------------------------KRF-------- 25
           MFGR P +KSDNTK+YEILGV K                          ++F        
Sbjct: 1   MFGRGPSRKSDNTKFYEILGVPKTAAPEDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYE 60

Query: 26  VLSDPEKREIYDQYGEDALKEGMGGGGGAHDPFDIFQSFF--GGSPFGGGSSRGRRQRRG 83
           VLSDPEKREIYDQYGEDALKEGMGGGGG HDPFDIF SFF  GG PF G  SRGRRQRRG
Sbjct: 61  VLSDPEKREIYDQYGEDALKEGMGGGGGGHDPFDIFSSFFGSGGHPF-GSHSRGRRQRRG 119

Query: 84  EDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRH 143
           EDV+HPLKVSLED+Y GT+KKLSLSR  +C+KC GKGSKSGASMKC GCQGSGMK+SIR 
Sbjct: 120 EDVVHPLKVSLEDVYLGTTKKLSLSRKALCSKCNGKGSKSGASMKCGGCQGSGMKISIRQ 179

Query: 144 LGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITF 203
            GP M+QQ+QH CN+CKGTGETIND+DRCPQCKGEKV+ EKKVLEV VEKGMQ+ QKITF
Sbjct: 180 FGPGMMQQVQHACNDCKGTGETINDRDRCPQCKGEKVVSEKKVLEVNVEKGMQHNQKITF 239

Query: 204 PGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQ 263
            G+ADEAPDTVTGDIVFV+QQKEHPKFKRKG+DLFVEHT+SLTEALCGFQFV+THLD RQ
Sbjct: 240 SGQADEAPDTVTGDIVFVIQQKEHPKFKRKGEDLFVEHTISLTEALCGFQFVLTHLDKRQ 299

Query: 264 LLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVL 323
           LLIKS+PGEVVKPD +KAI+DEGMP+YQRPFM+GKLYIHFTV+FPESLSPDQ K +E VL
Sbjct: 300 LLIKSKPGEVVKPDSYKAISDEGMPIYQRPFMKGKLYIHFTVEFPESLSPDQTKAIEAVL 359

Query: 324 PPRTSVQLTDMELDECEETTLHDVNIEEEMRRKQQAAQEAYDED-DDMQGGAQRVQCAQQ 382
           P  T   ++DME+D+CEETTLHDVNIE+EM+RK QA +EAYD+D +D  GGAQRVQCAQQ
Sbjct: 360 PKPTKAAISDMEIDDCEETTLHDVNIEDEMKRKAQAQREAYDDDEEDHPGGAQRVQCAQQ 419

Have a continuous role in plant development probably in the structural organization of compartments.

Arabidopsis thaliana (taxid: 3702)

>sp|P42824|DNJH2_ALLPO DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE=2 SV=1

 Score =  603 bits (1554), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 333/418 (79%), Positives = 356/418 (85%), Gaps = 36/418 (8%)

Query: 1   MFGRAPKKSDNTKYYEILGVSK--------------------------KRF--------V 26
           MFGRAPKKSDNTKYYE+LGVSK                          ++F        V
Sbjct: 1   MFGRAPKKSDNTKYYEVLGVSKNATPEDLKKAYRKAAIKNHPDKGGDPEKFKEIGQAYEV 60

Query: 27  LSDPEKREIYDQYGEDALKEGMGGGGGAHDPFDI-FQSFFGGSPFGGGSSRGRRQRRGED 85
           L+DPEKREIYDQYGE+ LKEGMGGGGG HDPFDI    F GG   GGGSSRGRRQRRGED
Sbjct: 61  LNDPEKREIYDQYGEEGLKEGMGGGGGVHDPFDIFQSFFGGGGFGGGGSSRGRRQRRGED 120

Query: 86  VIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLG 145
           V+HPLKVSLEDLYNGTSKKLSLSRNV+CTKCKGKGSKSGASM C+ CQGSGMKVSIR LG
Sbjct: 121 VVHPLKVSLEDLYNGTSKKLSLSRNVLCTKCKGKGSKSGASMNCASCQGSGMKVSIRQLG 180

Query: 146 PSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 205
           P MIQQMQHPCNECKGTGE I+DKDRCPQCKGEKV+Q+KKVLEV VEKGMQNGQKITFPG
Sbjct: 181 PGMIQQMQHPCNECKGTGEMISDKDRCPQCKGEKVVQQKKVLEVHVEKGMQNGQKITFPG 240

Query: 206 EADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLL 265
           EADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLF EH+LSLTEALCGFQFV+THLD RQLL
Sbjct: 241 EADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFYEHSLSLTEALCGFQFVLTHLDNRQLL 300

Query: 266 IKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPP 325
           IKS PGEV+KPDQFK INDEGMPMYQRPFMRGKLYIHF+VDFP+SL+PDQCK LE+VLP 
Sbjct: 301 IKSNPGEVIKPDQFKGINDEGMPMYQRPFMRGKLYIHFSVDFPDSLTPDQCKALESVLPS 360

Query: 326 RTSVQLTDMELDECEETTLHDVNIEEEMRRKQ-QAAQEAYDEDDDMQGGAQRVQCAQQ 382
           R + +LTDME+DECEETT+HDVNIEEEMRRKQ Q AQEAYDEDD+  GGAQRVQCAQQ
Sbjct: 361 RNASRLTDMEIDECEETTMHDVNIEEEMRRKQHQQAQEAYDEDDEGHGGAQRVQCAQQ 418

Have a continuous role in plant development probably in the structural organization of compartments.

Allium porrum (taxid: 4681)

>sp|Q94AW8|DNAJ3_ARATH Chaperone protein dnaJ 3 OS=Arabidopsis thaliana GN=ATJ3 PE=1 SV=2

 Score =  589 bits (1518), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 321/420 (76%), Positives = 350/420 (83%), Gaps = 38/420 (9%)

Query: 1   MFGRAP-KKSDNTKYYEILGVSK--------------------------KRF-------- 25
           MFGR P KKSDNTK+YEILGV K                          ++F        
Sbjct: 1   MFGRGPSKKSDNTKFYEILGVPKSASPEDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYE 60

Query: 26  VLSDPEKREIYDQYGEDALKEGMGGGGGAHDPFDIFQSFFGGSPFGGGSSRGRRQRRGED 85
           VLSDPEKREIYDQYGEDALKEGMGGGGG HDPFDIF SFFGG PFGG +SR RRQRRGED
Sbjct: 61  VLSDPEKREIYDQYGEDALKEGMGGGGGGHDPFDIFSSFFGGGPFGGNTSRQRRQRRGED 120

Query: 86  VIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLG 145
           V+HPLKVSLED+Y GT KKLSLSRN +C+KC GKGSKSGAS+KC GCQGSGMKVSIR LG
Sbjct: 121 VVHPLKVSLEDVYLGTMKKLSLSRNALCSKCNGKGSKSGASLKCGGCQGSGMKVSIRQLG 180

Query: 146 PSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 205
           P MIQQMQH CNECKGTGETIND+DRCPQCKG+KVI EKKVLEV VEKGMQ+ QKITF G
Sbjct: 181 PGMIQQMQHACNECKGTGETINDRDRCPQCKGDKVIPEKKVLEVNVEKGMQHSQKITFEG 240

Query: 206 EADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLL 265
           +ADEAPDTVTGDIVFVLQQKEHPKFKRKG+DLFVEHTLSLTEALCGFQFV+THLDGR LL
Sbjct: 241 QADEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFVEHTLSLTEALCGFQFVLTHLDGRSLL 300

Query: 266 IKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPP 325
           IKS PGEVVKPD +KAI+DEGMP+YQRPFM+GKLYIHFTV+FP+SLSPDQ K LE VLP 
Sbjct: 301 IKSNPGEVVKPDSYKAISDEGMPIYQRPFMKGKLYIHFTVEFPDSLSPDQTKALEAVLPK 360

Query: 326 RTSVQLTDMELDECEETTLHDVNIEEEMRRKQQAAQEAYDEDDDMQ---GGAQRVQCAQQ 382
            ++ QL+DME+DECEETTLHDVNIE+EMRRK QA +EAYD+DD+     GGAQRVQCAQQ
Sbjct: 361 PSTAQLSDMEIDECEETTLHDVNIEDEMRRKAQAQREAYDDDDEDDDHPGGAQRVQCAQQ 420

Have a continuous role in plant development probably in the structural organization of compartments.

Arabidopsis thaliana (taxid: 3702)

>sp|Q03363|DNJH1_ALLPO DnaJ protein homolog 1 (Fragment) OS=Allium porrum GN=DNAJ1 PE=2 SV=1

 Score =  582 bits (1501), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 309/359 (86%), Positives = 330/359 (91%), Gaps = 2/359 (0%)

Query: 26  VLSDPEKREIYDQYGEDALKEGMGGGGGAHDPFDIFQSFFGGSPFGGGSSRGRRQRRG-E 84
           VLSDPEKREIYDQYGEDALKEGMGGGGG HDPFDIFQSFFGG  FGGG S   R++R  E
Sbjct: 39  VLSDPEKREIYDQYGEDALKEGMGGGGGDHDPFDIFQSFFGGGGFGGGGSSRGRRQRRGE 98

Query: 85  DVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHL 144
           DV+HPLKVSLE+LYNGTSKKLSLSRNVIC+KC GKGSKSGASM+C+ CQGSGMKVSIR L
Sbjct: 99  DVVHPLKVSLEELYNGTSKKLSLSRNVICSKCNGKGSKSGASMRCASCQGSGMKVSIRQL 158

Query: 145 GPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFP 204
           GP MIQQMQHPCN+CKGTGE INDKDRCP CKGEKV+QEKKVLEV VEKGMQNGQ+ITFP
Sbjct: 159 GPGMIQQMQHPCNDCKGTGEMINDKDRCPLCKGEKVVQEKKVLEVHVEKGMQNGQRITFP 218

Query: 205 GEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQL 264
           GEADEAPDTVTGDIVFVLQQKEHPKF+RKGDDLF +HTLSLTEALCGFQFV+THLDGRQL
Sbjct: 219 GEADEAPDTVTGDIVFVLQQKEHPKFQRKGDDLFYKHTLSLTEALCGFQFVLTHLDGRQL 278

Query: 265 LIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 324
           LIKS PGEVVKPDQFKAINDEGMPMYQRPFMRGKLYI F VDFP+SL+PDQCK++E+VLP
Sbjct: 279 LIKSNPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIQFLVDFPDSLTPDQCKVIESVLP 338

Query: 325 PRTSVQLTDMELDECEETTLHDVNIEEEMRRKQ-QAAQEAYDEDDDMQGGAQRVQCAQQ 382
              S QLTDME+DECEETT+HDVNIEEEMRRKQ Q AQEAYDEDD+  GG QRVQCAQQ
Sbjct: 339 RSASSQLTDMEIDECEETTMHDVNIEEEMRRKQHQHAQEAYDEDDEGHGGGQRVQCAQQ 397

Have a continuous role in plant development probably in the structural organization of compartments.

Allium porrum (taxid: 4681)

>sp|Q5E954|DNJA1_BOVIN DnaJ homolog subfamily A member 1 OS=Bos taurus GN=DNAJA1 PE=2 SV=2

 Score =  329 bits (843), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 180/362 (49%), Positives = 247/362 (68%), Gaps = 17/362 (4%)

Query: 20  VSKKRFVLSDPEKREIYDQYGEDALKEGMGGGGGAHDPFDIFQSFFGGSPFGGGSSRGRR 79
           +S+   VLSD +KRE+YD+ GE A+KEG  GGG    P DIF  FFGG    GG  R +R
Sbjct: 48  ISQAYEVLSDAKKRELYDKGGEQAIKEGGAGGG-FGSPMDIFDMFFGG----GG--RMQR 100

Query: 80  QRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKV 139
           +RRG++V+H L V+LEDLYNG ++KL+L +NVIC KC+G+G K GA   C  C+G+GM++
Sbjct: 101 ERRGKNVVHQLTVTLEDLYNGATRKLALQKNVICDKCEGRGGKKGAVECCPNCRGTGMQI 160

Query: 140 SIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQ 199
            I  +GP M+QQ+Q  C EC+G GE I+ KDRC  C G K+++EKK+LEV ++KGM++GQ
Sbjct: 161 RIHQIGPGMVQQIQSVCMECQGHGERISPKDRCKSCNGRKIVREKKILEVHIDKGMKDGQ 220

Query: 200 KITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHL 259
           KITF GE D+ P    GDI+ VL QK+H  F R+G+DLF+   + L EALCGFQ  I+ L
Sbjct: 221 KITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTL 280

Query: 260 DGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPES--LSPDQCK 317
           D R ++I S PG++VK    K + +EGMP+Y+RP+ +G+L I F V+FPE+  LSPD+  
Sbjct: 281 DNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLS 340

Query: 318 MLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRKQQAAQEAYDEDDDMQGGAQRV 377
           +LE +LP R  V+ TD E+D+ E   L D +  +E RR      EAY++D+    G   V
Sbjct: 341 LLEKLLPERKEVEETD-EMDQVE---LVDFDPNQERRRHYNG--EAYEDDEHHPRGG--V 392

Query: 378 QC 379
           QC
Sbjct: 393 QC 394

Co-chaperone of Hsc70. Seems to play a role in protein import into mitochondria.

Bos taurus (taxid: 9913)

>sp|P31689|DNJA1_HUMAN DnaJ homolog subfamily A member 1 OS=Homo sapiens GN=DNAJA1 PE=1 SV=2

 Score =  328 bits (842), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 180/362 (49%), Positives = 247/362 (68%), Gaps = 17/362 (4%)

Query: 20  VSKKRFVLSDPEKREIYDQYGEDALKEGMGGGGGAHDPFDIFQSFFGGSPFGGGSSRGRR 79
           +S+   VLSD +KRE+YD+ GE A+KEG  GGG    P DIF  FFGG    GG  R +R
Sbjct: 48  ISQAYEVLSDAKKRELYDKGGEQAIKEGGAGGG-FGSPMDIFDMFFGG----GG--RMQR 100

Query: 80  QRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKV 139
           +RRG++V+H L V+LEDLYNG ++KL+L +NVIC KC+G+G K GA   C  C+G+GM++
Sbjct: 101 ERRGKNVVHQLSVTLEDLYNGATRKLALQKNVICDKCEGRGGKKGAVECCPNCRGTGMQI 160

Query: 140 SIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQ 199
            I  +GP M+QQ+Q  C EC+G GE I+ KDRC  C G K+++EKK+LEV ++KGM++GQ
Sbjct: 161 RIHQIGPGMVQQIQSVCMECQGHGERISPKDRCKSCNGRKIVREKKILEVHIDKGMKDGQ 220

Query: 200 KITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHL 259
           KITF GE D+ P    GDI+ VL QK+H  F R+G+DLF+   + L EALCGFQ  I+ L
Sbjct: 221 KITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTL 280

Query: 260 DGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPES--LSPDQCK 317
           D R ++I S PG++VK    K + +EGMP+Y+RP+ +G+L I F V+FPE+  LSPD+  
Sbjct: 281 DNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLS 340

Query: 318 MLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRKQQAAQEAYDEDDDMQGGAQRV 377
           +LE +LP R  V+ TD E+D+ E   L D +  +E RR      EAY++D+    G   V
Sbjct: 341 LLEKLLPERKEVEETD-EMDQVE---LVDFDPNQERRRHYNG--EAYEDDEHHPRGG--V 392

Query: 378 QC 379
           QC
Sbjct: 393 QC 394

Co-chaperone of Hsc70. Seems to play a role in protein import into mitochondria.

Homo sapiens (taxid: 9606)

>sp|Q5NVI9|DNJA1_PONAB DnaJ homolog subfamily A member 1 OS=Pongo abelii GN=DNAJA1 PE=2 SV=1

 Score =  328 bits (841), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 178/362 (49%), Positives = 245/362 (67%), Gaps = 18/362 (4%)

Query: 20  VSKKRFVLSDPEKREIYDQYGEDALKEGMGGGGGAHDPFDIFQSFFGGSPFGGGSSRGRR 79
           +S+   VLSD +KRE+YD+ GE A+KEG  GGG    P DIF  FFGG        R +R
Sbjct: 48  ISQAYEVLSDAKKRELYDKGGEQAIKEGGAGGG-FGSPMDIFDMFFGGG-------RMQR 99

Query: 80  QRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKV 139
           +RRG++V+H L V+LEDLYNG ++KL+L +NVIC KC+G+G K GA   C  C+G+GM++
Sbjct: 100 ERRGKNVVHQLSVTLEDLYNGATRKLALQKNVICDKCEGRGGKKGAVECCPNCRGTGMQI 159

Query: 140 SIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQ 199
            I  +GP M+QQ+Q  C EC+G GE I+ KDRC  C G K+++EKK+LEV ++KGM++GQ
Sbjct: 160 RIHQIGPGMVQQIQSVCMECQGHGERISPKDRCKSCNGRKIVREKKILEVHIDKGMKDGQ 219

Query: 200 KITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHL 259
           KITF GE D+ P    GDI+ VL QK+H  F R+G+DLF+   + L EALCGFQ  I+ L
Sbjct: 220 KITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTL 279

Query: 260 DGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPES--LSPDQCK 317
           D R ++I S PG++VK    K + +EGMP+Y+RP+ +G+L I F V+FPE+  LSPD+  
Sbjct: 280 DNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLS 339

Query: 318 MLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRKQQAAQEAYDEDDDMQGGAQRV 377
           +LE +LP R  V+ TD E+D+ E   L D +  +E RR      EAY++D+    G   V
Sbjct: 340 LLEKLLPERKEVEETD-EMDQVE---LVDFDPNQERRRHYNG--EAYEDDEHHPRGG--V 391

Query: 378 QC 379
           QC
Sbjct: 392 QC 393

Co-chaperone of Hsc70. Seems to play a role in protein import into mitochondria.

Pongo abelii (taxid: 9601)

>sp|Q95JF4|DNAJ1_CHLAE DnaJ homolog subfamily A member 1 OS=Chlorocebus aethiops GN=DNAJA1 PE=2 SV=1

 Score =  328 bits (841), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 179/362 (49%), Positives = 247/362 (68%), Gaps = 17/362 (4%)

Query: 20  VSKKRFVLSDPEKREIYDQYGEDALKEGMGGGGGAHDPFDIFQSFFGGSPFGGGSSRGRR 79
           +S+   VLSD +KRE+YD+ GE A+KEG  GGG    P DIF  FFGG    GG  R +R
Sbjct: 48  ISQAYEVLSDAKKRELYDKGGEQAIKEGGAGGG-FGSPMDIFDMFFGG----GG--RMQR 100

Query: 80  QRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKV 139
           +RRG++V+H L V+LEDLYNG ++KL+L +NVIC KC+G+G K GA   C  C+G+GM++
Sbjct: 101 ERRGKNVVHQLSVTLEDLYNGATRKLALQKNVICDKCEGRGGKKGAVECCPNCRGTGMQI 160

Query: 140 SIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQ 199
            I  +GP M+QQ+Q  C EC+G GE I+ KDRC  C G K+++EKK+LEV ++KGM++GQ
Sbjct: 161 RIHQIGPGMVQQIQSVCMECQGHGERISPKDRCKSCNGRKIVREKKILEVHIDKGMKDGQ 220

Query: 200 KITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHL 259
           KITF GE D+ P    GDI+ VL QK+H  F R+G+DLF+   + L EALCGFQ  I+ L
Sbjct: 221 KITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTL 280

Query: 260 DGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPES--LSPDQCK 317
           D R ++I S PG++VK    K + +EGMP+Y+RP+ +G+L I F ++FPE+  LSPD+  
Sbjct: 281 DNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKINFPENGFLSPDKLS 340

Query: 318 MLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRKQQAAQEAYDEDDDMQGGAQRV 377
           +LE +LP R  V+ TD E+D+ E   L D +  +E RR      EAY++D+    G   V
Sbjct: 341 LLEKLLPERKEVEETD-EMDQVE---LVDFDPNQERRRHYNG--EAYEDDEHHPRGG--V 392

Query: 378 QC 379
           QC
Sbjct: 393 QC 394

Co-chaperone of Hsc70. Seems to play a role in protein import into mitochondria.

Chlorocebus aethiops (taxid: 9534)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	382
4210948	415	DnaJ protein [Hevea brasiliensis]	0.997	0.918	0.831	0.0
4008159	420	DnaJ homolog [Salix gilgiana]	1.0	0.909	0.833	0.0
255546721	418	Chaperone protein dnaJ, putative [Ricinu	1.0	0.913	0.849	0.0
350536331	419	DnaJ-like protein [Solanum lycopersicum]	1.0	0.911	0.818	0.0
225463715	416	PREDICTED: dnaJ protein homolog [Vitis v	0.997	0.915	0.832	0.0
224097588	420	predicted protein [Populus trichocarpa]	1.0	0.909	0.830	0.0
161137763	417	DnaJ [Viola baoshanensis]	1.0	0.916	0.824	0.0
224113389	422	predicted protein [Populus trichocarpa]	1.0	0.905	0.831	0.0
10945669	418	J1P [Daucus carota] gi|10945671|gb|AAG24	1.0	0.913	0.825	0.0
449525882	413	PREDICTED: dnaJ protein homolog [Cucumis	0.989	0.915	0.832	1e-179

>gi|4210948|gb|AAD12055.1| DnaJ protein [Hevea brasiliensis]

 Score =  667 bits (1720), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/416 (83%), Positives = 362/416 (87%), Gaps = 35/416 (8%)

Query: 1   MFGRAPKKSDNTKYYEILGVSK--------------------------KRF--------V 26
           MFGRAPKKSDNTKYYEILGVSK                          ++F        V
Sbjct: 1   MFGRAPKKSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEV 60

Query: 27  LSDPEKREIYDQYGEDALKEGMGGGGGAHDPFDIFQSFFGGSPFGGGSSRGRRQRRGEDV 86
           LSDPEKREIYDQYGEDALKEGMG GGGAHDPFDIFQSFFGG+PFGGG S   R++ GEDV
Sbjct: 61  LSDPEKREIYDQYGEDALKEGMGSGGGAHDPFDIFQSFFGGNPFGGGGSSRGRRKEGEDV 120

Query: 87  IHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLGP 146
           IHPLKVSLEDLYNGTSKKLSLSRNVIC+KCKGKGSKSGASMKCSGCQGSGMKVSIR LGP
Sbjct: 121 IHPLKVSLEDLYNGTSKKLSLSRNVICSKCKGKGSKSGASMKCSGCQGSGMKVSIRQLGP 180

Query: 147 SMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGE 206
           SMIQQMQHPCNECKGTGETINDKDRCPQCKGEKV+QEKKVLEVIVEKGMQNGQ+ITFPGE
Sbjct: 181 SMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVVQEKKVLEVIVEKGMQNGQRITFPGE 240

Query: 207 ADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLI 266
           ADEAPDT+TGDIVFVLQQKEHPKFKRKGDDL V+HTLSLTEALC  QF++THLDG  LLI
Sbjct: 241 ADEAPDTITGDIVFVLQQKEHPKFKRKGDDLIVDHTLSLTEALCASQFILTHLDG-DLLI 299

Query: 267 KSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPR 326
           KSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHF+VDFP+SL PDQCK LE VLP R
Sbjct: 300 KSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPDSLPPDQCKALEAVLPSR 359

Query: 327 TSVQLTDMELDECEETTLHDVNIEEEMRRKQQAAQEAYDEDDDMQGGAQRVQCAQQ 382
           TSVQL+DMELDECEETTLHDVN +EEMRRKQQ AQEAYDEDDDM GG QRVQCAQQ
Sbjct: 360 TSVQLSDMELDECEETTLHDVNFDEEMRRKQQQAQEAYDEDDDMHGGGQRVQCAQQ 415

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|4008159|dbj|BAA35121.1| DnaJ homolog [Salix gilgiana]

 Score =  663 bits (1710), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/420 (83%), Positives = 365/420 (86%), Gaps = 38/420 (9%)

Query: 1   MFGRAPKKSDNTKYYEILGVSK--------------------------KRF--------V 26
           MFGRAPKKSDNTKYYE+LGVSK                          ++F        V
Sbjct: 1   MFGRAPKKSDNTKYYEVLGVSKSASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEV 60

Query: 27  LSDPEKREIYDQYGEDALKEGMG-GGGGAHDPFDIFQ--SFFGGSPFGGGSSRGRRQRRG 83
           LSDPEKREIYDQYGEDALKEGMG GG GAHDPFDIFQ     G    GGGSSRGRRQRRG
Sbjct: 61  LSDPEKREIYDQYGEDALKEGMGSGGSGAHDPFDIFQSFFGGGNPFGGGGSSRGRRQRRG 120

Query: 84  EDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRH 143
           EDVIHPLKVS EDLYNGTSKKLSLSRNVIC+KCKGKGSKSGAS KC+GCQGSGMKVSIRH
Sbjct: 121 EDVIHPLKVSFEDLYNGTSKKLSLSRNVICSKCKGKGSKSGASSKCAGCQGSGMKVSIRH 180

Query: 144 LGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITF 203
           LGPSMIQQMQH CNECKGTGETINDKDRCPQCKGEKV+QEKKVLEV+VEKGMQNGQK+TF
Sbjct: 181 LGPSMIQQMQHACNECKGTGETINDKDRCPQCKGEKVVQEKKVLEVVVEKGMQNGQKVTF 240

Query: 204 PGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQ 263
           PGEADEAPDTVTGDIVFVLQQK+HPKFKRKGDDLFVEHTLSLTEALCGFQFV+THLDGRQ
Sbjct: 241 PGEADEAPDTVTGDIVFVLQQKDHPKFKRKGDDLFVEHTLSLTEALCGFQFVLTHLDGRQ 300

Query: 264 LLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVL 323
           LLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHF+V+FP+SLSPD CK LE VL
Sbjct: 301 LLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVEFPDSLSPDMCKALEAVL 360

Query: 324 PPRTSVQLTDMELDECEETTLHDVNIEEEMRRK-QQAAQEAYDEDDDMQGGAQRVQCAQQ 382
           PPR SVQLTDMELDECEETTLHDVNI+EEMRRK QQ AQEAYDEDD+M GGAQRVQCAQQ
Sbjct: 361 PPRASVQLTDMELDECEETTLHDVNIDEEMRRKQQQQAQEAYDEDDEMPGGAQRVQCAQQ 420

Source: Salix gilgiana

Species: Salix gilgiana

Genus: Salix

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255546721|ref|XP_002514419.1| Chaperone protein dnaJ, putative [Ricinus communis] gi|111143344|gb|ABH06547.1| molecular chaperone [Ricinus communis] gi|223546415|gb|EEF47915.1| Chaperone protein dnaJ, putative [Ricinus communis]

 Score =  659 bits (1699), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/418 (84%), Positives = 366/418 (87%), Gaps = 36/418 (8%)

Query: 1   MFGRAPKKSDNTKYYEILGVSK--------------------------KRF--------V 26
           MFGRAPKKSDNTKYYEILGVSK                          ++F        V
Sbjct: 1   MFGRAPKKSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEV 60

Query: 27  LSDPEKREIYDQYGEDALKE-GMGGGGGAHDPFDIFQ-SFFGGSPFGGGSSRGRRQRRGE 84
           LSDPEKREIYDQYGEDALKE   GGGGG HDPFDIFQ  F G    GGGSSRGRRQRRGE
Sbjct: 61  LSDPEKREIYDQYGEDALKEGMGGGGGGGHDPFDIFQSFFGGSPFGGGGSSRGRRQRRGE 120

Query: 85  DVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHL 144
           DVIHPLKVSLEDLYNGTSKKLSLSRNVIC+KCKGKGSKSGASMKCSGCQGSGMKVSIRHL
Sbjct: 121 DVIHPLKVSLEDLYNGTSKKLSLSRNVICSKCKGKGSKSGASMKCSGCQGSGMKVSIRHL 180

Query: 145 GPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFP 204
           GPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKV+QEKKVLEVIVEKGMQNGQKITFP
Sbjct: 181 GPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVVQEKKVLEVIVEKGMQNGQKITFP 240

Query: 205 GEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQL 264
           GEADEAPDT+TGDIVFVLQQKEHPKFKRKGDDL VEHTLSLTEALCGFQF++THLDGRQL
Sbjct: 241 GEADEAPDTITGDIVFVLQQKEHPKFKRKGDDLVVEHTLSLTEALCGFQFILTHLDGRQL 300

Query: 265 LIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 324
           LIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHF+VDFP+SL PDQCK LETVLP
Sbjct: 301 LIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPDSLPPDQCKALETVLP 360

Query: 325 PRTSVQLTDMELDECEETTLHDVNIEEEMRRKQQAAQEAYDEDDDMQGGAQRVQCAQQ 382
            RTSVQL+DMELDECEETTLHDVN EEEMRRKQQ AQEAYDED+DM GGAQRVQCAQQ
Sbjct: 361 SRTSVQLSDMELDECEETTLHDVNFEEEMRRKQQQAQEAYDEDEDMHGGAQRVQCAQQ 418

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|350536331|ref|NP_001234241.1| DnaJ-like protein [Solanum lycopersicum] gi|6782421|gb|AAF28382.1|AF124139_1 DnaJ-like protein [Solanum lycopersicum]

 Score =  655 bits (1689), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/419 (81%), Positives = 360/419 (85%), Gaps = 37/419 (8%)

Query: 1   MFGRAPKKSDNTKYYEILGVSK--------------------------KRF--------V 26
           MFGRAPKKSDNTKYYEILGV K                          ++F        V
Sbjct: 1   MFGRAPKKSDNTKYYEILGVPKAASQEDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEV 60

Query: 27  LSDPEKREIYDQYGEDALKEGMGGGGGAHDPFDIFQSFFGGSPFGGGSS---RGRRQRRG 83
           LSDPEKREIYDQYGEDALKEGMGGGGG H+PFDIFQSFFGG     G     R RRQRRG
Sbjct: 61  LSDPEKREIYDQYGEDALKEGMGGGGGGHEPFDIFQSFFGGGGNPFGGGGSSRVRRQRRG 120

Query: 84  EDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRH 143
           EDVIHPLKVSLEDLYNGTSKKLSLSRNV+C+KCKGKGSKSGASMKCSGCQGSGMKVSIR 
Sbjct: 121 EDVIHPLKVSLEDLYNGTSKKLSLSRNVLCSKCKGKGSKSGASMKCSGCQGSGMKVSIRQ 180

Query: 144 LGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITF 203
           LGPSMIQQMQHPCNECKGTGETI+DKDRCPQCKGEKV+QEKKVLEV VEKGMQNGQKITF
Sbjct: 181 LGPSMIQQMQHPCNECKGTGETISDKDRCPQCKGEKVVQEKKVLEVHVEKGMQNGQKITF 240

Query: 204 PGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQ 263
           PGEADEAPDT+TGDIVFVLQQKEHPKFKRKGDDLFVEHTLSL E+LCGFQFV+THLD RQ
Sbjct: 241 PGEADEAPDTITGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLDESLCGFQFVLTHLDNRQ 300

Query: 264 LLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVL 323
           LLIKSQPGEVVKPDQFKAINDEGMPMYQRPFM+GK+YIHFTVDFPESL  +QCK LE VL
Sbjct: 301 LLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMKGKMYIHFTVDFPESLHAEQCKNLEAVL 360

Query: 324 PPRTSVQLTDMELDECEETTLHDVNIEEEMRRKQQAAQEAYDEDDDMQGGAQRVQCAQQ 382
           PP+T +Q++DMELDE EETTLHDVNIEEEMRRKQQAAQEA DEDDDM GGAQRVQCAQQ
Sbjct: 361 PPKTKLQISDMELDEWEETTLHDVNIEEEMRRKQQAAQEAQDEDDDMPGGAQRVQCAQQ 419

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225463715|ref|XP_002263156.1| PREDICTED: dnaJ protein homolog [Vitis vinifera] gi|296084435|emb|CBI24994.3| unnamed protein product [Vitis vinifera]

 Score =  650 bits (1676), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/417 (83%), Positives = 368/417 (88%), Gaps = 36/417 (8%)

Query: 1   MFGRAPKKSDNTKYYEILGVSK--------------------------KRF--------V 26
           MFGRAPKKSDNTKYY++LGVSK                          ++F        V
Sbjct: 1   MFGRAPKKSDNTKYYDVLGVSKNASQEDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEV 60

Query: 27  LSDPEKREIYDQYGEDALKEGMGGGGGAHDPFDIFQSFFGGSPFGGGSSRGRRQRRG-ED 85
           LSDPEKREIYDQYGEDALKEGMGGGGG HDPFDIFQSFFGG+PFGGG S   R++R  ED
Sbjct: 61  LSDPEKREIYDQYGEDALKEGMGGGGGGHDPFDIFQSFFGGNPFGGGGSSRGRRQRRGED 120

Query: 86  VIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLG 145
           VIHPLKVSLEDLYNGTSKKLSLSRNVIC+KCKGKGSKSGASMKCSGCQGSGMKVSIRHLG
Sbjct: 121 VIHPLKVSLEDLYNGTSKKLSLSRNVICSKCKGKGSKSGASMKCSGCQGSGMKVSIRHLG 180

Query: 146 PSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 205
           PSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKV+QEKKVLEVIVEKGMQNGQ+ITFPG
Sbjct: 181 PSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVVQEKKVLEVIVEKGMQNGQRITFPG 240

Query: 206 EADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLL 265
           EADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQF++THLDGRQLL
Sbjct: 241 EADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFILTHLDGRQLL 300

Query: 266 IKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPP 325
           IKS PGEVVKPDQFKAINDEGMP+YQ+PFM+GKLYIHF VDFP+SL+ DQCK LE VLPP
Sbjct: 301 IKSHPGEVVKPDQFKAINDEGMPIYQKPFMKGKLYIHFAVDFPDSLNTDQCKALEAVLPP 360

Query: 326 RTSVQLTDMELDECEETTLHDVNIEEEMRRKQQAAQEAYDEDDDMQGGAQRVQCAQQ 382
           RTS QLTDME+DECEETTLHDVNIEEEMRRK QAAQEAY+ED+D+ GGAQRVQCAQQ
Sbjct: 361 RTSTQLTDMEIDECEETTLHDVNIEEEMRRK-QAAQEAYEEDEDIHGGAQRVQCAQQ 416

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224097588|ref|XP_002310999.1| predicted protein [Populus trichocarpa] gi|222850819|gb|EEE88366.1| predicted protein [Populus trichocarpa]

 Score =  649 bits (1673), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/420 (83%), Positives = 362/420 (86%), Gaps = 38/420 (9%)

Query: 1   MFGRAPKKSDNTKYYEILGVSK--------------------------KRF--------V 26
           MFGRAPKKSDNTKYYE+LGVSK                          ++F        V
Sbjct: 1   MFGRAPKKSDNTKYYEVLGVSKSASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEV 60

Query: 27  LSDPEKREIYDQYGEDALKE-GMGGGGGAHDPFDIFQ--SFFGGSPFGGGSSRGRRQRRG 83
           LSDPEKREIYDQYGEDALKE   GGG GAHDPFDIFQ     G    GGGSSRGRRQRRG
Sbjct: 61  LSDPEKREIYDQYGEDALKEGMGGGGSGAHDPFDIFQSFFGGGNPFGGGGSSRGRRQRRG 120

Query: 84  EDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRH 143
           EDVIHPLKVS ED+YNGTSKKLSLSRNVIC+KCKGKGSKSGAS KC+GCQGSGMKVSIRH
Sbjct: 121 EDVIHPLKVSFEDIYNGTSKKLSLSRNVICSKCKGKGSKSGASSKCAGCQGSGMKVSIRH 180

Query: 144 LGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITF 203
           LGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKV QEKKVLEV+VEKGMQNGQ+ITF
Sbjct: 181 LGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVAQEKKVLEVVVEKGMQNGQRITF 240

Query: 204 PGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQ 263
           PGEADEAPDTVTGDIVFVLQQK+HPKFKRKGDDLFVEHTLSLTEALCGF FV+THLDGRQ
Sbjct: 241 PGEADEAPDTVTGDIVFVLQQKDHPKFKRKGDDLFVEHTLSLTEALCGFHFVLTHLDGRQ 300

Query: 264 LLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVL 323
           LLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHF+VDFP+SLS DQCK LE VL
Sbjct: 301 LLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPDSLSTDQCKALEAVL 360

Query: 324 PPRTSVQLTDMELDECEETTLHDVNIEEEMRRK-QQAAQEAYDEDDDMQGGAQRVQCAQQ 382
           PPR SVQLTDMELDECEETTLHDVNIEEEMRRK QQ AQEAYDEDD+M GGAQRVQCAQQ
Sbjct: 361 PPRASVQLTDMELDECEETTLHDVNIEEEMRRKQQQQAQEAYDEDDEMPGGAQRVQCAQQ 420

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|161137763|gb|ABX57881.1| DnaJ [Viola baoshanensis]

 Score =  648 bits (1671), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/417 (82%), Positives = 361/417 (86%), Gaps = 35/417 (8%)

Query: 1   MFGRAPKKSDNTKYYEILGVSK--------------------------KRF--------V 26
           MFGRAPKKSDNTKYYEILGVSK                          ++F        V
Sbjct: 1   MFGRAPKKSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEV 60

Query: 27  LSDPEKREIYDQYGEDALKEGMGGGGGAHDPFDIFQ-SFFGGSPFGGGSSRGRRQRRGED 85
           LSDPEKREIYDQYGEDALKEGMGGGGG HDPFDIFQ  F G    GGGSSRGRRQR+GED
Sbjct: 61  LSDPEKREIYDQYGEDALKEGMGGGGGGHDPFDIFQSFFGGNPFGGGGSSRGRRQRKGED 120

Query: 86  VIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLG 145
           V+HPLKVSLEDLYNGTSKKLSLSRNVIC+KCKGKGSKSGASMKCSGCQGSGM+VSIRHLG
Sbjct: 121 VVHPLKVSLEDLYNGTSKKLSLSRNVICSKCKGKGSKSGASMKCSGCQGSGMRVSIRHLG 180

Query: 146 PSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 205
           PSMIQQMQHPCNECKGTGETINDKDRC QCKGEKV+QEKKVLEV VEKGMQNGQKITFPG
Sbjct: 181 PSMIQQMQHPCNECKGTGETINDKDRCQQCKGEKVVQEKKVLEVHVEKGMQNGQKITFPG 240

Query: 206 EADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLL 265
           EADEAPDTVTGDIV VLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQF + HLD RQLL
Sbjct: 241 EADEAPDTVTGDIVSVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFALAHLDNRQLL 300

Query: 266 IKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPP 325
           IKSQPGEVVKPDQFKAINDEGMP+YQRPFMRGKLYIHFTV+FP+SL+PDQ + +E VLP 
Sbjct: 301 IKSQPGEVVKPDQFKAINDEGMPIYQRPFMRGKLYIHFTVEFPDSLTPDQSRAIEAVLPA 360

Query: 326 RTSVQLTDMELDECEETTLHDVNIEEEMRRKQQAAQEAYDEDDDMQGGAQRVQCAQQ 382
           R S QLTDME+DECEETTLHDVNIE+EMRRKQQ AQEAYDED+DM GGAQRVQCAQQ
Sbjct: 361 RPSPQLTDMEVDECEETTLHDVNIEDEMRRKQQQAQEAYDEDEDMHGGAQRVQCAQQ 417

Source: Viola baoshanensis

Species: Viola baoshanensis

Genus: Viola

Family: Violaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224113389|ref|XP_002316479.1| predicted protein [Populus trichocarpa] gi|118486965|gb|ABK95315.1| unknown [Populus trichocarpa] gi|222865519|gb|EEF02650.1| predicted protein [Populus trichocarpa]

 Score =  645 bits (1664), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/422 (83%), Positives = 365/422 (86%), Gaps = 40/422 (9%)

Query: 1   MFGRAPKKSDNTKYYEILGVSK--------------------------KRF--------V 26
           MFGRAPKKSDNTKYYEILGVSK                          ++F        V
Sbjct: 1   MFGRAPKKSDNTKYYEILGVSKSASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEV 60

Query: 27  LSDPEKREIYDQYGEDALKE--GMGGGGGAHDPFDIFQ--SFFGGSPFGGGSSRGRRQRR 82
           LSDPEKREIYDQYGEDALKE  G GGGGGAHDPFDIFQ     G    GGGSSRGRRQRR
Sbjct: 61  LSDPEKREIYDQYGEDALKEGMGGGGGGGAHDPFDIFQSFFGGGNPFGGGGSSRGRRQRR 120

Query: 83  GEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIR 142
           GEDVIHPLKVSLED+YNGTSKKLSLSRNVIC+KCKGKGSKSGAS+KCSGCQGSGMKVSIR
Sbjct: 121 GEDVIHPLKVSLEDIYNGTSKKLSLSRNVICSKCKGKGSKSGASLKCSGCQGSGMKVSIR 180

Query: 143 HLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKIT 202
           HLGPSMIQQMQHPCN+CKGTGE INDKDRCPQCKGEKV+QEKKVLEV+VEKGMQN Q+IT
Sbjct: 181 HLGPSMIQQMQHPCNDCKGTGEAINDKDRCPQCKGEKVVQEKKVLEVVVEKGMQNAQRIT 240

Query: 203 FPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGR 262
           FPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSL EALCGFQF++THLDGR
Sbjct: 241 FPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLAEALCGFQFILTHLDGR 300

Query: 263 QLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETV 322
           QLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFP+SLS DQCK LETV
Sbjct: 301 QLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPDSLSLDQCKALETV 360

Query: 323 LPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK-QQAAQEAYDEDDDMQ-GGAQRVQCA 380
           LPPRTS +LTDMELDECEETTLHDVNIEEEMRRK QQ AQEAYDEDD+M  GG QRVQCA
Sbjct: 361 LPPRTSAELTDMELDECEETTLHDVNIEEEMRRKQQQQAQEAYDEDDEMHGGGGQRVQCA 420

Query: 381 QQ 382
           QQ
Sbjct: 421 QQ 422

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|10945669|gb|AAG24642.1|AF308737_1 J1P [Daucus carota] gi|10945671|gb|AAG24643.1|AF308738_1 J2P [Daucus carota]

 Score =  642 bits (1656), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/418 (82%), Positives = 365/418 (87%), Gaps = 36/418 (8%)

Query: 1   MFGRAPKKSDNTKYYEILGVSK--------------------------KRF--------V 26
           MFGRAPKKSDNTKYYEILGV K                          ++F        V
Sbjct: 1   MFGRAPKKSDNTKYYEILGVPKTASPDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEV 60

Query: 27  LSDPEKREIYDQYGEDALKEGMGGGGGA-HDPFDIFQSFFGGSPFGGGSSRGRRQRRG-E 84
           LSDPEKREIYDQYGEDALKEGMGGGGG  HDPFDIFQSFFGGSPFGGG S   R++R  E
Sbjct: 61  LSDPEKREIYDQYGEDALKEGMGGGGGGGHDPFDIFQSFFGGSPFGGGGSSRGRRQRRGE 120

Query: 85  DVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHL 144
           DVIHPLKVSLEDL NGTSKKLSLSRNVIC+KCKGKGSKSGASM C GCQGSGMKVSIRHL
Sbjct: 121 DVIHPLKVSLEDLCNGTSKKLSLSRNVICSKCKGKGSKSGASMTCPGCQGSGMKVSIRHL 180

Query: 145 GPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFP 204
           GPSMIQQMQHPCN+CKGTGETINDKDRCPQCKG+KV+QEKK +EVIVEKGMQNGQKITFP
Sbjct: 181 GPSMIQQMQHPCNDCKGTGETINDKDRCPQCKGQKVVQEKKAIEVIVEKGMQNGQKITFP 240

Query: 205 GEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQL 264
           GEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEH+L+L+EALCGFQF +THLDGRQL
Sbjct: 241 GEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHSLTLSEALCGFQFTLTHLDGRQL 300

Query: 265 LIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 324
           LIKSQPGEV+KPDQFK INDEGMPMYQRPFMRGKLYIHF+VDFPESL+P+QCK LE VLP
Sbjct: 301 LIKSQPGEVIKPDQFKGINDEGMPMYQRPFMRGKLYIHFSVDFPESLTPEQCKALEAVLP 360

Query: 325 PRTSVQLTDMELDECEETTLHDVNIEEEMRRKQQAAQEAYDEDDDMQGGAQRVQCAQQ 382
           PR S+Q+TDMELDECEETTLHDVNIEEEMRRKQQAAQEAYDED+DM GGAQRVQCAQQ
Sbjct: 361 PRPSIQMTDMELDECEETTLHDVNIEEEMRRKQQAAQEAYDEDEDMHGGAQRVQCAQQ 418

Source: Daucus carota

Species: Daucus carota

Genus: Daucus

Family: Apiaceae

Order: Apiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449525882|ref|XP_004169945.1| PREDICTED: dnaJ protein homolog [Cucumis sativus] gi|461944|sp|Q04960.1|DNJH_CUCSA RecName: Full=DnaJ protein homolog; AltName: Full=DNAJ-1; Flags: Precursor gi|18260|emb|CAA47925.1| cs DnaJ-1 [Cucumis sativus]

 Score =  634 bits (1636), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 347/417 (83%), Positives = 364/417 (87%), Gaps = 39/417 (9%)

Query: 1   MFGRAPKKSDNTKYYEILGVSK--------------------------KRF--------V 26
           MFGR PKKSDNTKYYEILGVSK                          ++F        V
Sbjct: 1   MFGR-PKKSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEV 59

Query: 27  LSDPEKREIYDQYGEDALKEGMGGGGGAHDPFDIFQSFFGGSPFGGGSSRGRRQRRG-ED 85
           LSDPEKREIYDQYGEDALKEGMGGGG  HDPFDIFQSFFGGSPFGGG S   R++R  ED
Sbjct: 60  LSDPEKREIYDQYGEDALKEGMGGGG-GHDPFDIFQSFFGGSPFGGGGSSRGRRQRRGED 118

Query: 86  VIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLG 145
           VIHPLKVSLEDLYNGTSKKLSLSRNVIC+KCKGKGSKSGASMKC GCQGSGMKVSIRHLG
Sbjct: 119 VIHPLKVSLEDLYNGTSKKLSLSRNVICSKCKGKGSKSGASMKCPGCQGSGMKVSIRHLG 178

Query: 146 PSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 205
           PSMIQQMQHPCNECKGTGETINDKDRC QCKGEKV+QEKKVLEVIVEKGMQN QKITFPG
Sbjct: 179 PSMIQQMQHPCNECKGTGETINDKDRCSQCKGEKVVQEKKVLEVIVEKGMQNAQKITFPG 238

Query: 206 EADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLL 265
           EADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSL E+LCGFQF++THLDGRQLL
Sbjct: 239 EADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLVESLCGFQFILTHLDGRQLL 298

Query: 266 IKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPP 325
           IKS PGEVVKPDQFKAINDEGMPMYQRPFM+GKLYIHF+V+FP+SL+P+QCK LE VLPP
Sbjct: 299 IKSLPGEVVKPDQFKAINDEGMPMYQRPFMKGKLYIHFSVEFPDSLNPEQCKALEGVLPP 358

Query: 326 RTSVQLTDMELDECEETTLHDVNIEEEMRRKQQAAQEAYDEDDDMQGGAQRVQCAQQ 382
           RTSVQL+DMELDECEETTLHDVNIEEEMRRKQ  AQEAYDED+DM GGAQRVQCAQQ
Sbjct: 359 RTSVQLSDMELDECEETTLHDVNIEEEMRRKQ--AQEAYDEDEDMHGGAQRVQCAQQ 413

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	382
TAIR|locus:2081378	420	J3 [Arabidopsis thaliana (taxi	0.976	0.888	0.675	9.2e-139
TAIR|locus:505006628	419	J2 "DNAJ homologue 2" [Arabido	0.976	0.890	0.648	1.6e-134
UNIPROTKB|O60884	412	DNAJA2 "DnaJ homolog subfamily	0.973	0.902	0.419	1.8e-76
UNIPROTKB|Q2HJ94	412	DNAJA2 "DnaJ homolog subfamily	0.871	0.808	0.450	2.9e-76
UNIPROTKB|E2R7F3	413	DNAJA2 "Uncharacterized protei	0.871	0.806	0.450	3.6e-76
UNIPROTKB|F1RP05	412	LOC100521133 "Uncharacterized	0.871	0.808	0.450	3.6e-76
MGI|MGI:1931882	412	Dnaja2 "DnaJ (Hsp40) homolog,	0.973	0.902	0.417	5.9e-76
UNIPROTKB|Q5M9H7	412	Dnaja2 "DnaJ homolog subfamily	0.973	0.902	0.417	5.9e-76
RGD|71001	412	Dnaja2 "DnaJ (Hsp40) homolog,	0.973	0.902	0.414	2e-75
ZFIN|ZDB-GENE-030131-2884	413	dnaja2l "DnaJ (Hsp40) homolog,	0.890	0.823	0.440	7.3e-75

TAIR|locus:2081378 J3 [Arabidopsis thaliana (taxid:3702)]

 Score = 1284 (457.0 bits), Expect = 9.2e-139, Sum P(2) = 9.2e-139
 Identities = 256/379 (67%), Positives = 279/379 (73%)

Query:     7 KKSDNTKYYEILGVSKKRFVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXX 66
             K  D  K+ E+    +   VLSDPEKREIYDQYGEDALKE        HDPFDI      
Sbjct:    45 KGGDPEKFKELAQAYE---VLSDPEKREIYDQYGEDALKEGMGGGGGGHDPFDIFSSFFG 101

Query:    67 XXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXX 126
                              EDV+HPLKVSLED+Y GT KKLSLSRN +              
Sbjct:   102 GGPFGGNTSRQRRQRRGEDVVHPLKVSLEDVYLGTMKKLSLSRNALCSKCNGKGSKSGAS 161

Query:   127 XXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKV 186
                   QGSGMKVSIR LGP MIQQMQH CNECKGTGETIND+DRCPQCKG+KVI EKKV
Sbjct:   162 LKCGGCQGSGMKVSIRQLGPGMIQQMQHACNECKGTGETINDRDRCPQCKGDKVIPEKKV 221

Query:   187 LEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLT 246
             LEV VEKGMQ+ QKITF G+ADEAPDTVTGDIVFVLQQKEHPKFKRKG+DLFVEHTLSLT
Sbjct:   222 LEVNVEKGMQHSQKITFEGQADEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFVEHTLSLT 281

Query:   247 EALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVD 306
             EALCGFQFV+THLDGR LLIKS PGEVVKPD +KAI+DEGMP+YQRPFM+GKLYIHFTV+
Sbjct:   282 EALCGFQFVLTHLDGRSLLIKSNPGEVVKPDSYKAISDEGMPIYQRPFMKGKLYIHFTVE 341

Query:   307 FPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRKXXXXXXXXXX 366
             FP+SLSPDQ K LE VLP  ++ QL+DME+DECEETTLHDVNIE+EMRRK          
Sbjct:   342 FPDSLSPDQTKALEAVLPKPSTAQLSDMEIDECEETTLHDVNIEDEMRRKAQAQREAYDD 401

Query:   367 XXXXX---GGAQRVQCAQQ 382
                     GGAQRVQCAQQ
Sbjct:   402 DDEDDDHPGGAQRVQCAQQ 420

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006457 "protein folding" evidence=ISS

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0005730 "nucleolus" evidence=IDA

GO:0005618 "cell wall" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009651 "response to salt stress" evidence=IMP

GO:0043462 "regulation of ATPase activity" evidence=IMP

GO:0005829 "cytosol" evidence=IDA

GO:0009911 "positive regulation of flower development" evidence=IMP

GO:0048573 "photoperiodism, flowering" evidence=IMP

GO:0009506 "plasmodesma" evidence=IDA

GO:0006499 "N-terminal protein myristoylation" evidence=RCA

TAIR|locus:505006628 J2 "DNAJ homologue 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1249 (444.7 bits), Expect = 1.6e-134, Sum P(2) = 1.6e-134
 Identities = 245/378 (64%), Positives = 277/378 (73%)

Query:     7 KKSDNTKYYEILGVSKKRFVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXX 66
             K  D  K+ E+    +   VLSDPEKREIYDQYGEDALKE        HDPFDI      
Sbjct:    45 KGGDPEKFKELAQAYE---VLSDPEKREIYDQYGEDALKEGMGGGGGGHDPFDIFSSFFG 101

Query:    67 XXXX-XXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXX 125
                               EDV+HPLKVSLED+Y GT+KKLSLSR  +             
Sbjct:   102 SGGHPFGSHSRGRRQRRGEDVVHPLKVSLEDVYLGTTKKLSLSRKALCSKCNGKGSKSGA 161

Query:   126 XXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKK 185
                    QGSGMK+SIR  GP M+QQ+QH CN+CKGTGETIND+DRCPQCKGEKV+ EKK
Sbjct:   162 SMKCGGCQGSGMKISIRQFGPGMMQQVQHACNDCKGTGETINDRDRCPQCKGEKVVSEKK 221

Query:   186 VLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSL 245
             VLEV VEKGMQ+ QKITF G+ADEAPDTVTGDIVFV+QQKEHPKFKRKG+DLFVEHT+SL
Sbjct:   222 VLEVNVEKGMQHNQKITFSGQADEAPDTVTGDIVFVIQQKEHPKFKRKGEDLFVEHTISL 281

Query:   246 TEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTV 305
             TEALCGFQFV+THLD RQLLIKS+PGEVVKPD +KAI+DEGMP+YQRPFM+GKLYIHFTV
Sbjct:   282 TEALCGFQFVLTHLDKRQLLIKSKPGEVVKPDSYKAISDEGMPIYQRPFMKGKLYIHFTV 341

Query:   306 DFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRKXXXXXXXXX 365
             +FPESLSPDQ K +E VLP  T   ++DME+D+CEETTLHDVNIE+EM+RK         
Sbjct:   342 EFPESLSPDQTKAIEAVLPKPTKAAISDMEIDDCEETTLHDVNIEDEMKRKAQAQREAYD 401

Query:   366 XXXXXX-GGAQRVQCAQQ 382
                    GGAQRVQCAQQ
Sbjct:   402 DDEEDHPGGAQRVQCAQQ 419

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS;RCA

GO:0009408 "response to heat" evidence=IEA;RCA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006499 "N-terminal protein myristoylation" evidence=RCA

GO:0009644 "response to high light intensity" evidence=RCA

GO:0042542 "response to hydrogen peroxide" evidence=RCA

UNIPROTKB|O60884 DNAJA2 "DnaJ homolog subfamily A member 2" [Homo sapiens (taxid:9606)]

 Score = 752 (269.8 bits), Expect = 1.8e-76, Sum P(2) = 1.8e-76
 Identities = 160/381 (41%), Positives = 214/381 (56%)

Query:     6 PKKSDNT--KYYEILGVSKKRFVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXX 63
             P K+ N   K+ EI   S    VLS+PEKRE+YD+YGE  L+E         D F     
Sbjct:    37 PDKNPNAGDKFKEI---SFAYEVLSNPEKRELYDRYGEQGLREGSGGGGGMDDIFSHIFG 93

Query:    64 XXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXX 123
                                 ED++HPLKVSLEDLYNG + KL LS+NV+           
Sbjct:    94 GGLFGFMGNQSRSRNGRRRGEDMMHPLKVSLEDLYNGKTTKLQLSKNVLCSACSGQGGKS 153

Query:   124 XXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQE 183
                      +G G+++ IR L P M+QQMQ  C++C G GE IN+KDRC +C+G+KVI+E
Sbjct:   154 GAVQKCSACRGRGVRIMIRQLAPGMVQQMQSVCSDCNGEGEVINEKDRCKKCEGKKVIKE 213

Query:   184 KKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTL 243
              K+LEV V+KGM++GQ+ITF GEAD+AP    GDIV +LQ+KEH  F+R G+DL + + +
Sbjct:   214 VKILEVHVDKGMKHGQRITFTGEADQAPGVEPGDIVLLLQEKEHEVFQRDGNDLHMTYKI 273

Query:   244 SLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHF 303
              L EALCGFQF   HLDGRQ+++K  PG+V++P   + +  EGMP Y+ PF +G LYI F
Sbjct:   274 GLVEALCGFQFTFKHLDGRQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKF 333

Query:   304 TVDFPES--LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRKXXXXX 361
              V FPE+  ++PD+   LE +LP R  V     E +E E             +R+     
Sbjct:   334 DVQFPENNWINPDKLSELEDLLPSRPEVPNIIGETEEVELQEFDSTRGSGGGQRREAYND 393

Query:   362 XXXXXXXXXXGGAQRVQCAQQ 382
                       G    VQCA Q
Sbjct:   394 SSDEESSSHHGPG--VQCAHQ 412

GO:0005524 "ATP binding" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0009408 "response to heat" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0008284 "positive regulation of cell proliferation" evidence=TAS

UNIPROTKB|Q2HJ94 DNAJA2 "DnaJ homolog subfamily A member 2" [Bos taurus (taxid:9913)]

 Score = 750 (269.1 bits), Expect = 2.9e-76, Sum P(2) = 2.9e-76
 Identities = 154/342 (45%), Positives = 207/342 (60%)

Query:     6 PKKSDNT--KYYEILGVSKKRFVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXX 63
             P K+ N   K+ EI   S    VLS+PEKRE+YD+YGE  L+E         D F     
Sbjct:    37 PDKNPNAGDKFKEI---SFAYEVLSNPEKRELYDRYGEQGLREGSGGGGGMDDIFSHIFG 93

Query:    64 XXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXX 123
                                 ED++HPLKVSLEDLYNG + KL LS+NV+           
Sbjct:    94 GGLFSFMGNQSRSRNGRRRGEDMMHPLKVSLEDLYNGKTTKLQLSKNVLCSACSGQGGKS 153

Query:   124 XXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQE 183
                      +G G+++ IR L P M+QQMQ  C++C G GE IN+KDRC +C+G+KVI+E
Sbjct:   154 GAVQKCSACRGRGVRIMIRQLAPGMVQQMQSVCSDCNGEGEVINEKDRCKKCEGKKVIKE 213

Query:   184 KKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTL 243
              K+LEV V+KGM++GQ+ITF GEAD+AP    GDIV +LQ+KEH  F+R G+DL + + +
Sbjct:   214 VKILEVHVDKGMKHGQRITFTGEADQAPGVEPGDIVLLLQEKEHEVFQRDGNDLHMTYKI 273

Query:   244 SLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHF 303
              L EALCGFQF   HLDGRQ+++K  PG+V++P   + +  EGMP Y+ PF +G LYI F
Sbjct:   274 GLVEALCGFQFTFKHLDGRQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKF 333

Query:   304 TVDFPES--LSPDQCKMLETVLPPRTSVQ--LTDMELDECEE 341
              V FPE+  ++PD+   LE +LP R  V   + D E  E +E
Sbjct:   334 DVQFPENNWINPDKLSELEDLLPSRPEVPNIIGDTEEVELQE 375

GO:0016020 "membrane" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0009408 "response to heat" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|E2R7F3 DNAJA2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 749 (268.7 bits), Expect = 3.6e-76, Sum P(2) = 3.6e-76
 Identities = 154/342 (45%), Positives = 207/342 (60%)

Query:     6 PKKSDNT--KYYEILGVSKKRFVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXX 63
             P K+ N   K+ EI   S    VLS+PEKRE+YD+YGE  L+E         D F     
Sbjct:    38 PDKNPNAGDKFKEI---SFAYEVLSNPEKRELYDRYGEQGLREGSGGGGGMDDIFSHIFG 94

Query:    64 XXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXX 123
                                 ED++HPLKVSLEDLYNG + KL LS+NV+           
Sbjct:    95 GGLFGFMGNQSRSRNGRRRGEDMMHPLKVSLEDLYNGKTTKLQLSKNVLCSACSGQGGKS 154

Query:   124 XXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQE 183
                      +G G+++ IR L P M+QQMQ  C++C G GE IN+KDRC +C+G+KVI+E
Sbjct:   155 GAVQKCSACRGRGVRIMIRQLAPGMVQQMQSVCSDCNGEGEVINEKDRCKKCEGKKVIKE 214

Query:   184 KKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTL 243
              K+LEV V+KGM++GQ+ITF GEAD+AP    GDIV +LQ+KEH  F+R G+DL + + +
Sbjct:   215 VKILEVHVDKGMKHGQRITFTGEADQAPGVEPGDIVLLLQEKEHEVFQRDGNDLHMTYKI 274

Query:   244 SLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHF 303
              L EALCGFQF   HLDGRQ+++K  PG+V++P   + +  EGMP Y+ PF +G LYI F
Sbjct:   275 GLVEALCGFQFTFKHLDGRQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKF 334

Query:   304 TVDFPES--LSPDQCKMLETVLPPRTSVQ--LTDMELDECEE 341
              V FPE+  ++PD+   LE +LP R  V   + D E  E +E
Sbjct:   335 DVQFPENNWINPDKLSELEDLLPSRPEVPNIIGDTEEVELQE 376

GO:0046872 "metal ion binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0009408 "response to heat" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|F1RP05 LOC100521133 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 749 (268.7 bits), Expect = 3.6e-76, Sum P(2) = 3.6e-76
 Identities = 154/342 (45%), Positives = 207/342 (60%)

Query:     6 PKKSDNT--KYYEILGVSKKRFVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXX 63
             P K+ N   K+ EI   S    VLS+PEKRE+YD+YGE  L+E         D F     
Sbjct:    37 PDKNPNAGDKFKEI---SFAYEVLSNPEKRELYDRYGEQGLREGSGGGGGMDDIFSHIFG 93

Query:    64 XXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXX 123
                                 ED++HPLKVSLEDLYNG + KL LS+NV+           
Sbjct:    94 GGLFGFMGNQSRSRNGRRKGEDMMHPLKVSLEDLYNGKTTKLQLSKNVLCSACSGQGGKS 153

Query:   124 XXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQE 183
                      +G G+++ IR L P M+QQMQ  C++C G GE IN+KDRC +C+G+KVI+E
Sbjct:   154 GAVQKCSACRGRGVRIMIRQLAPGMVQQMQSVCSDCNGEGEVINEKDRCKKCEGKKVIKE 213

Query:   184 KKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTL 243
              K+LEV V+KGM++GQ+ITF GEAD+AP    GDIV +LQ+KEH  F+R G+DL + + +
Sbjct:   214 VKILEVHVDKGMKHGQRITFTGEADQAPGVEPGDIVLLLQEKEHEVFQRDGNDLHMTYKI 273

Query:   244 SLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHF 303
              L EALCGFQF   HLDGRQ+++K  PG+V++P   + +  EGMP Y+ PF +G LYI F
Sbjct:   274 GLVEALCGFQFTFKHLDGRQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKF 333

Query:   304 TVDFPES--LSPDQCKMLETVLPPRTSVQ--LTDMELDECEE 341
              V FPE+  ++PD+   LE +LP R  V   + D E  E +E
Sbjct:   334 DVQFPENNWINPDKLSELEDLLPSRPEVPNIIGDTEEVELQE 375

GO:0046872 "metal ion binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0009408 "response to heat" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

MGI|MGI:1931882 Dnaja2 "DnaJ (Hsp40) homolog, subfamily A, member 2" [Mus musculus (taxid:10090)]

 Score = 747 (268.0 bits), Expect = 5.9e-76, Sum P(2) = 5.9e-76
 Identities = 159/381 (41%), Positives = 213/381 (55%)

Query:     6 PKKSDNT--KYYEILGVSKKRFVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXX 63
             P K+ N   K+ EI   S    VLS+PEKRE+YD+YGE  L+E         D F     
Sbjct:    37 PDKNPNAGDKFKEI---SFAYEVLSNPEKRELYDRYGEQGLREGSGGGGGMDDIFSHIFG 93

Query:    64 XXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXX 123
                                 ED++HPLKVSLEDLYNG + KL LS+NV+           
Sbjct:    94 GGLFGFMGNQSRSRNGRRRGEDMMHPLKVSLEDLYNGKTTKLQLSKNVLCSACSGQGGKS 153

Query:   124 XXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQE 183
                      +G G+++ IR L P M+QQMQ  C++C G GE IN+KDRC +C+G+KVI+E
Sbjct:   154 GAVQKCSACRGRGVRIMIRQLAPGMVQQMQSVCSDCNGEGEVINEKDRCKKCEGKKVIKE 213

Query:   184 KKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTL 243
              K+LEV V+KGM++GQ+ITF GEAD+AP    GDIV +LQ+KEH  F+R G+DL + + +
Sbjct:   214 VKILEVHVDKGMKHGQRITFTGEADQAPGVEPGDIVLLLQEKEHEVFQRDGNDLHMTYKI 273

Query:   244 SLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHF 303
              L EALCGFQF   HLD RQ+++K  PG+V++P   + +  EGMP Y+ PF +G LYI F
Sbjct:   274 GLVEALCGFQFTFKHLDARQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKF 333

Query:   304 TVDFPES--LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRKXXXXX 361
              V FPE+  ++PD+   LE +LP R  V     E +E E             +R+     
Sbjct:   334 DVQFPENNWINPDKLSELEDLLPSRPEVPNVIGETEEVELQEFDSTRGSGGGQRREAYND 393

Query:   362 XXXXXXXXXXGGAQRVQCAQQ 382
                       G    VQCA Q
Sbjct:   394 SSDEESSSHHGPG--VQCAHQ 412

GO:0001948 "glycoprotein binding" evidence=ISO

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISO

GO:0005737 "cytoplasm" evidence=IEA

GO:0005829 "cytosol" evidence=ISO

GO:0006260 "DNA replication" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0006950 "response to stress" evidence=IEA

GO:0009408 "response to heat" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

UNIPROTKB|Q5M9H7 Dnaja2 "DnaJ homolog subfamily A member 2" [Rattus norvegicus (taxid:10116)]

 Score = 747 (268.0 bits), Expect = 5.9e-76, Sum P(2) = 5.9e-76
 Identities = 159/381 (41%), Positives = 213/381 (55%)

Query:     6 PKKSDNT--KYYEILGVSKKRFVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXX 63
             P K+ N   K+ EI   S    VLS+PEKRE+YD+YGE  L+E         D F     
Sbjct:    37 PDKNPNAGDKFKEI---SFAYEVLSNPEKRELYDRYGEQGLREGSGGGGGMDDIFSHIFG 93

Query:    64 XXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXX 123
                                 ED++HPLKVSLEDLYNG + KL LS+NV+           
Sbjct:    94 GGLFGFMGNQSRSRNGRRRGEDMMHPLKVSLEDLYNGKTTKLQLSKNVLCSACSGQGGKS 153

Query:   124 XXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQE 183
                      +G G+++ IR L P M+QQMQ  C++C G GE IN+KDRC +C+G+KVI+E
Sbjct:   154 GAVQKCSACRGRGVRIMIRQLAPGMVQQMQSVCSDCNGEGEVINEKDRCKKCEGKKVIKE 213

Query:   184 KKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTL 243
              K+LEV V+KGM++GQ+ITF GEAD+AP    GDIV +LQ+KEH  F+R G+DL + + +
Sbjct:   214 VKILEVHVDKGMKHGQRITFTGEADQAPGVEPGDIVLLLQEKEHEVFQRDGNDLHMTYKI 273

Query:   244 SLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHF 303
              L EALCGFQF   HLD RQ+++K  PG+V++P   + +  EGMP Y+ PF +G LYI F
Sbjct:   274 GLVEALCGFQFTFKHLDARQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKF 333

Query:   304 TVDFPES--LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRKXXXXX 361
              V FPE+  ++PD+   LE +LP R  V     E +E E             +R+     
Sbjct:   334 DVQFPENNWINPDKLSELEDLLPSRPEVPNVIGETEEVELQEFDSTRGSGGGQRREAYND 393

Query:   362 XXXXXXXXXXGGAQRVQCAQQ 382
                       G    VQCA Q
Sbjct:   394 SSDEESSSHHGPG--VQCAHQ 412

GO:0005524 "ATP binding" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0009408 "response to heat" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

RGD|71001 Dnaja2 "DnaJ (Hsp40) homolog, subfamily A, member 2" [Rattus norvegicus (taxid:10116)]

 Score = 742 (266.3 bits), Expect = 2.0e-75, Sum P(2) = 2.0e-75
 Identities = 158/381 (41%), Positives = 212/381 (55%)

Query:     6 PKKSDNT--KYYEILGVSKKRFVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXX 63
             P K+ N   K+ EI   S    VLS+PEKRE+YD+YGE  L+E         D F     
Sbjct:    37 PDKNPNAGDKFKEI---SFAYEVLSNPEKRELYDRYGEQGLREGSGGGGGMDDIFSHIFG 93

Query:    64 XXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXX 123
                                 ED++HPLKVSLEDLYNG + KL LS+NV+           
Sbjct:    94 GGLFGFMGNQSRSRNGRRRGEDMMHPLKVSLEDLYNGKTTKLQLSKNVLCSACSGQGGKS 153

Query:   124 XXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQE 183
                      +G G+++ IR L P M+QQMQ  C++C G GE IN+KDRC +C+G+KVI+E
Sbjct:   154 GAVQKCSACRGRGVRIMIRQLAPGMVQQMQSVCSDCNGEGEVINEKDRCKKCEGKKVIKE 213

Query:   184 KKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTL 243
              K+LEV V+KGM++GQ+ITF GEAD+AP    GDIV  +Q+KEH  F+R G+DL + + +
Sbjct:   214 VKILEVHVDKGMKHGQRITFTGEADQAPGVEPGDIVLFVQEKEHEVFQRDGNDLHMTYKI 273

Query:   244 SLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHF 303
              L EALCGFQF   HLD RQ+++K  PG+V++P   + +  EGMP Y+ PF +G LYI F
Sbjct:   274 GLVEALCGFQFTFKHLDARQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKF 333

Query:   304 TVDFPES--LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRKXXXXX 361
              V FPE+  ++PD+   LE +LP R  V     E +E E             +R+     
Sbjct:   334 DVQFPENNWINPDKLSELEDLLPSRPEVPNVIGETEEVELQEFDSTRGSGGGQRREAYND 393

Query:   362 XXXXXXXXXXGGAQRVQCAQQ 382
                       G    VQCA Q
Sbjct:   394 SSDEESSSHHGPG--VQCAHQ 412

GO:0001948 "glycoprotein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006457 "protein folding" evidence=IEA

GO:0009408 "response to heat" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0018885 "carbon tetrachloride metabolic process" evidence=IEP

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

ZFIN|ZDB-GENE-030131-2884 dnaja2l "DnaJ (Hsp40) homolog, subfamily A, member 2, like" [Danio rerio (taxid:7955)]

 Score = 755 (270.8 bits), Expect = 7.3e-75, P = 7.3e-75
 Identities = 155/352 (44%), Positives = 211/352 (59%)

Query:     6 PKKSDNT--KYYEILGVSKKRFVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFD--IX 61
             P K+ N   K+ EI   S    VL++PEK+++YD+YGE  L+E         D F     
Sbjct:    37 PDKNPNAGDKFKEI---SFAYEVLTNPEKKDLYDRYGEQGLREGGGGGAGMEDIFSHIFG 93

Query:    62 XXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXX 121
                                   ED+IHPLKVSLEDLYNG + KL LS+NV+         
Sbjct:    94 GGLFGFMGGQSSKSRNGGRRRGEDMIHPLKVSLEDLYNGKTTKLQLSKNVLCSACNGQGG 153

Query:   122 XXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVI 181
                        +G GM++ IR L P M+QQMQ  C +C G GE I++KDRC +C G KV 
Sbjct:   154 KTGAVQKCSTCRGRGMRIMIRQLAPGMVQQMQSVCTDCNGEGEVIHEKDRCKECDGRKVC 213

Query:   182 QEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEH 241
             +E KVLEV V+KGM++GQKITF GEAD++P+T  GDI+ VLQ+K+H +F+R G+DL + H
Sbjct:   214 KEVKVLEVHVDKGMKHGQKITFSGEADQSPNTEPGDIILVLQEKDHEEFRRDGNDLHIGH 273

Query:   242 TLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYI 301
              + L EALCGFQF++THLDGR L+IK  PG+VV+P   + +  EGMP Y+ PF +G L+I
Sbjct:   274 KIGLVEALCGFQFMLTHLDGRHLVIKYPPGKVVEPGSIRVVRGEGMPQYRNPFEKGDLFI 333

Query:   302 HFTVDFPES--LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEE 351
              F V FPE+  +S ++   LE +LP RT V +   +    EE  L D ++ +
Sbjct:   334 KFDVQFPENGWISTEKLSELEDLLPSRTEVPVISADT---EEVDLQDFDMSQ 382

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0009408 "response to heat" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P43644	DNJH_ATRNU	No assigned EC number	0.8062	0.9973	0.9136	N/A	no
P31689	DNJA1_HUMAN	No assigned EC number	0.4972	0.9031	0.8690	yes	no
P63036	DNJA1_RAT	No assigned EC number	0.4944	0.9031	0.8690	yes	no
P63037	DNJA1_MOUSE	No assigned EC number	0.4944	0.9031	0.8690	yes	no
Q5E954	DNJA1_BOVIN	No assigned EC number	0.4972	0.9031	0.8690	yes	no
Q94AW8	DNAJ3_ARATH	No assigned EC number	0.7642	1.0	0.9095	no	no
P25491	MAS5_YEAST	No assigned EC number	0.4368	0.9083	0.8484	yes	no
O74752	MAS5_SCHPO	No assigned EC number	0.4661	0.9581	0.8992	yes	no
Q5NVI9	DNJA1_PONAB	No assigned EC number	0.4917	0.9005	0.8686	yes	no
Q03363	DNJH1_ALLPO	No assigned EC number	0.8607	0.9345	0.8992	N/A	no
Q2HJ94	DNJA2_BOVIN	No assigned EC number	0.5533	0.7879	0.7305	yes	no
Q04960	DNJH_CUCSA	No assigned EC number	0.8321	0.9895	0.9152	N/A	no
P42824	DNJH2_ALLPO	No assigned EC number	0.7966	1.0	0.9138	N/A	no
P42825	DNAJ2_ARATH	No assigned EC number	0.7380	0.9973	0.9093	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00002640001	SubName- Full=Chromosome undetermined scaffold_134, whole genome shotgun sequence; (416 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00024357001	SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (652 aa)			•			•			0.890
	GSVIVG00024351001	SubName- Full=Putative uncharacterized protein (Chromosome chr6 scaffold_3, whole genome shotgu [...] (648 aa)			•			•			0.890
	GSVIVG00021301001	SubName- Full=Chromosome chr8 scaffold_23, whole genome shotgun sequence; (649 aa)			•			•			0.889
	GSVIVG00033448001	RecName- Full=Ubiquitin carrier protein; EC=6.3.2.-; (148 aa)						•			0.800
	GSVIVG00012527001	SubName- Full=Putative uncharacterized protein (Chromosome undetermined scaffold_390, whole gen [...] (276 aa)						•			0.800
	GSVIVG00006484001	RecName- Full=Ubiquitin carrier protein; EC=6.3.2.-; (148 aa)						•			0.800
	GSVIVG00017185001	SubName- Full=Chromosome chr11 scaffold_14, whole genome shotgun sequence; (482 aa)			•						0.490
	GSVIVG00018506001	SubName- Full=Chromosome chr13 scaffold_17, whole genome shotgun sequence; (649 aa)			•						0.488
	GSVIVG00018481001	SubName- Full=Chromosome chr13 scaffold_17, whole genome shotgun sequence; (650 aa)			•						0.487
	GSVIVG00017724001	SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (538 aa)			•						0.486

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	382
PTZ00037	421	PTZ00037, PTZ00037, DnaJ_C chaperone protein; Prov	1e-125
COG0484	371	COG0484, DnaJ, DnaJ-class molecular chaperone with	6e-89
TIGR02349	354	TIGR02349, DnaJ_bact, chaperone protein DnaJ	2e-74
PRK10767	371	PRK10767, PRK10767, chaperone protein DnaJ; Provis	4e-56
PRK14278	378	PRK14278, PRK14278, chaperone protein DnaJ; Provis	4e-45
PRK14291	382	PRK14291, PRK14291, chaperone protein DnaJ; Provis	1e-44
cd10747	158	cd10747, DnaJ_C, C-terminal substrate binding doma	1e-42
PRK14289	386	PRK14289, PRK14289, chaperone protein DnaJ; Provis	7e-42
PRK14281	397	PRK14281, PRK14281, chaperone protein DnaJ; Provis	2e-41
PRK14293	374	PRK14293, PRK14293, chaperone protein DnaJ; Provis	3e-41
PRK14294	366	PRK14294, PRK14294, chaperone protein DnaJ; Provis	5e-41
PRK14283	378	PRK14283, PRK14283, chaperone protein DnaJ; Provis	8e-41
PRK14292	371	PRK14292, PRK14292, chaperone protein DnaJ; Provis	4e-39
PRK14301	373	PRK14301, PRK14301, chaperone protein DnaJ; Provis	5e-39
PRK14286	372	PRK14286, PRK14286, chaperone protein DnaJ; Provis	4e-38
PRK14277	386	PRK14277, PRK14277, chaperone protein DnaJ; Provis	1e-37
PRK14280	376	PRK14280, PRK14280, chaperone protein DnaJ; Provis	1e-37
PRK14290	365	PRK14290, PRK14290, chaperone protein DnaJ; Provis	3e-37
PRK14297	380	PRK14297, PRK14297, chaperone protein DnaJ; Provis	6e-37
PRK14285	365	PRK14285, PRK14285, chaperone protein DnaJ; Provis	7e-37
PRK14276	380	PRK14276, PRK14276, chaperone protein DnaJ; Provis	3e-35
PRK14282	369	PRK14282, PRK14282, chaperone protein DnaJ; Provis	6e-35
PRK14296	372	PRK14296, PRK14296, chaperone protein DnaJ; Provis	3e-33
PRK14284	391	PRK14284, PRK14284, chaperone protein DnaJ; Provis	7e-32
PRK14298	377	PRK14298, PRK14298, chaperone protein DnaJ; Provis	9e-32
PRK14300	372	PRK14300, PRK14300, chaperone protein DnaJ; Provis	5e-31
PRK14295	389	PRK14295, PRK14295, chaperone protein DnaJ; Provis	4e-30
PRK14287	371	PRK14287, PRK14287, chaperone protein DnaJ; Provis	1e-29
PRK14279	392	PRK14279, PRK14279, chaperone protein DnaJ; Provis	1e-29
PRK14288	369	PRK14288, PRK14288, chaperone protein DnaJ; Provis	1e-27
pfam01556	81	pfam01556, DnaJ_C, DnaJ C terminal domain	2e-23
pfam00684	65	pfam00684, DnaJ_CXXCXGXG, DnaJ central domain	6e-19
cd10719	65	cd10719, DnaJ_zf, Zinc finger domain of DnaJ and H	2e-17
PRK14299	291	PRK14299, PRK14299, chaperone protein DnaJ; Provis	2e-10
PRK14299	291	PRK14299, PRK14299, chaperone protein DnaJ; Provis	2e-06
PRK10266	306	PRK10266, PRK10266, curved DNA-binding protein Cbp	3e-05
cd10747	158	cd10747, DnaJ_C, C-terminal substrate binding doma	9e-05
TIGR03835	871	TIGR03835, termin_org_DnaJ, terminal organelle ass	0.001
COG2214	237	COG2214, CbpA, DnaJ-class molecular chaperone [Pos	0.002

>gnl|CDD|240236 PTZ00037, PTZ00037, DnaJ_C chaperone protein; Provisional

 Score =  366 bits (941), Expect = e-125
 Identities = 172/416 (41%), Positives = 238/416 (57%), Gaps = 49/416 (11%)

Query: 3   GRAPKKSDNTKYYEILGVSK--------------------------KRF--------VLS 28
           GR  ++ DN K YE+L +SK                          ++F        VLS
Sbjct: 19  GRRKREVDNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGDPEKFKEISRAYEVLS 78

Query: 29  DPEKREIYDQYGEDALKEGMGGGGGAHDPFDIFQSFFGGSPFGGGSSRGRRQRRGEDVIH 88
           DPEKR+IYD+YGE    EG+ GG    D  D+F   FGG    GG      ++RGED++ 
Sbjct: 79  DPEKRKIYDEYGE----EGLEGGEQPADASDLFDLIFGGGRKPGG------KKRGEDIVS 128

Query: 89  PLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLGPSM 148
            LKV+LE +YNG  +KL+++++VIC  C+G G    A + C  C G G++V IR +G  M
Sbjct: 129 HLKVTLEQIYNGAMRKLAINKDVICANCEGHGGPKDAFVDCKLCNGQGIRVQIRQMGS-M 187

Query: 149 IQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEAD 208
           I Q Q  CN C G G+ I +  +C  C G+ V + +K+LEV ++KG+ N  KITF GEAD
Sbjct: 188 IHQTQSTCNSCNGQGKIIPESKKCKNCSGKGVKKTRKILEVNIDKGVPNQHKITFHGEAD 247

Query: 209 EAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKS 268
           E P+ + G++VF+L +K H  FKR+G DLF+   +SL EAL GF F ITHLDGR+LL+ +
Sbjct: 248 EKPNEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRKLLVNT 307

Query: 269 QPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPD-QCKMLETVLPPRT 327
            PGEVVKP   K IN+EGMP Y+ PF +G LY+ F V FP       + K +   L P+ 
Sbjct: 308 PPGEVVKPGDIKVINNEGMPTYKSPFKKGNLYVTFEVIFPVDRKFTNEEKEILKSLFPQN 367

Query: 328 SVQLTDMELDECEETTLHDVNIEE-EMRRKQQAAQEAYDEDDDMQGGAQRVQCAQQ 382
             +  D+E  E E  T  +V+ EE + R ++Q  QE  D++       +RV C QQ
Sbjct: 368 PEEKKDLEDTEIEVVTAQNVDPEEVKDRDQKQQYQEDEDDEHHQ--EGERVACRQQ 421

Length = 421

>gnl|CDD|223560 COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

 Score =  272 bits (698), Expect = 6e-89
 Identities = 124/364 (34%), Positives = 176/364 (48%), Gaps = 55/364 (15%)

Query: 11  NTKYYEILGVS--------KKRF------------------------------VLSDPEK 32
              YYEILGVS        KK +                              VLSDPEK
Sbjct: 3   KRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEK 62

Query: 33  REIYDQYGEDALKEGMGGGGGA----HDPFDIFQSFFGGSPFGGGSSRGRRQRRGEDVIH 88
           R  YDQ+G    K G  GG G      D  DIF+ FFGG   GGG  R  R RRG D+ +
Sbjct: 63  RAAYDQFGHAGFKAGGFGGFGFGGFGGDFGDIFEDFFGGG--GGGRRRPNRPRRGADLRY 120

Query: 89  PLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMK-CSGCQGSGMKVSIRHLGPS 147
            L+++LE+   G  K++ ++R+V C+ C G G+K G   K C  C GSG   +++  G  
Sbjct: 121 NLEITLEEAVFGVKKEIRVTRSVTCSTCHGSGAKPGTDPKTCPTCNGSGQVRTVQRTG-- 178

Query: 148 MIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEA 207
                Q  C  C GTG+ I  KD C +CKG+  +++KK + V +  G+ +G +I   GE 
Sbjct: 179 -FFSFQQTCPTCNGTGKII--KDPCGKCKGKGRVKKKKSISVNIPAGVDDGDRIRLSGEG 235

Query: 208 DEAPDTVT-GDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLI 266
           +  P+    GD+   +  K HP F+R GDDL+ E  +S TEA  G +  +  LDGR + +
Sbjct: 236 EAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTEAALGGEIEVPTLDGR-VKL 294

Query: 267 KSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPR 326
           K   G   +  +   +  +GMP   R   RG LY+   V+ P++LS +Q ++LE      
Sbjct: 295 KIPAGT--QTGEVFRLRGKGMP-KLRSGGRGDLYVRVKVETPKNLSDEQKELLEEFAKSL 351

Query: 327 TSVQ 330
               
Sbjct: 352 GEGP 355

Length = 371

>gnl|CDD|233829 TIGR02349, DnaJ_bact, chaperone protein DnaJ

 Score =  234 bits (600), Expect = 2e-74
 Identities = 114/356 (32%), Positives = 166/356 (46%), Gaps = 56/356 (15%)

Query: 14  YYEILGVSK-----------------------------KRF--------VLSDPEKREIY 36
           YYEILGVSK                             ++F        VLSDPEKR  Y
Sbjct: 2   YYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQY 61

Query: 37  DQYGEDALKEGMGGGGGAHDPF---------DIFQSFFGGSPFGGGSSRGRRQRRGEDVI 87
           DQ+G      G GGGGG  + F         DIF  FFGG   G G  R    RRGED+ 
Sbjct: 62  DQFGHAGFNGGGGGGGGGFNGFDIGFFGDFGDIFGDFFGGG-GGSGRRRRSGPRRGEDLR 120

Query: 88  HPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMK-CSGCQGSGMKVSIRHLGP 146
           + L+++ E+   G  K++ + R   C  C G G+K G   K C  C G+G     +    
Sbjct: 121 YDLELTFEEAVFGVEKEIEIPRKESCETCHGTGAKPGTDPKTCPTCGGTGQVRRQQGTPF 180

Query: 147 SMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGE 206
              QQ Q  C  C G G+ I  K+ C  CKG+  ++E+K + V +  G+  GQ++   G+
Sbjct: 181 GFFQQQQ-TCPTCGGEGKII--KEPCSTCKGKGRVKERKTITVKIPAGVDTGQRLRVSGK 237

Query: 207 ADEAP-DTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLL 265
            +        GD+  V++ K H  F+R G+DL++E  +S T+A+ G +  +  LDG   L
Sbjct: 238 GNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTLDGDVKL 297

Query: 266 IKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLET 321
            K   G   +      +  +G+P   R   RG L +   V+ P++LS +Q ++LE 
Sbjct: 298 -KIPAG--TQSGTVFRLKGKGVP-RLRGNGRGDLLVTVKVETPKNLSKEQKELLEE 349

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family. Length = 354

>gnl|CDD|236757 PRK10767, PRK10767, chaperone protein DnaJ; Provisional

 Score =  187 bits (478), Expect = 4e-56
 Identities = 115/364 (31%), Positives = 171/364 (46%), Gaps = 83/364 (22%)

Query: 14  YYEILGVSK------------------------------KRF--------VLSDPEKREI 35
           YYE+LGVS+                              ++F        VLSDP+KR  
Sbjct: 6   YYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAA 65

Query: 36  YDQYGEDALKEGMGGGG-GAHDPF-----DIFQSFFGGSPFGGGSSRGRRQRRGEDVIHP 89
           YDQYG  A ++G GGGG G    F     DIF   FGG    G     +R RRG D+ + 
Sbjct: 66  YDQYGHAAFEQGGGGGGFGGGGGFGDIFGDIFGDIFGG----GRGGGRQRARRGADLRYN 121

Query: 90  LKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMK-CSGCQGSGMKVSIRHLGPSM 148
           ++++LE+   G +K++ +   V C  C G G+K G S K C  C G+G    +R      
Sbjct: 122 MEITLEEAVRGVTKEIRIPTLVTCDTCHGSGAKPGTSPKTCPTCHGAG---QVR------ 172

Query: 149 IQQ----MQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFP 204
           +QQ    +Q  C  C G G+ I  KD C +C G+  ++++K L V +  G+  G +I   
Sbjct: 173 MQQGFFTVQQTCPTCHGRGKII--KDPCKKCHGQGRVEKEKTLSVKIPAGVDTGDRIRLS 230

Query: 205 GEADE----APDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLD 260
           GE +      P    GD+   +  KEHP F+R G+DL+ E  +S T A  G +  +  LD
Sbjct: 231 GEGEAGERGGP---AGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLD 287

Query: 261 GRQLLIK----SQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQC 316
           GR + +K    +Q G       F+ +  +G+   +    RG LY    V+ P +L+  Q 
Sbjct: 288 GR-VKLKIPEGTQTG-----KLFR-LRGKGVKSVRSG-ARGDLYCQVVVETPVNLTKRQK 339

Query: 317 KMLE 320
           ++LE
Sbjct: 340 ELLE 343

Length = 371

>gnl|CDD|237654 PRK14278, PRK14278, chaperone protein DnaJ; Provisional

 Score =  159 bits (403), Expect = 4e-45
 Identities = 92/307 (29%), Positives = 148/307 (48%), Gaps = 23/307 (7%)

Query: 26  VLSDPEKREIYDQYGEDALKEGMGGGGGAHDPF----DIFQSFFGGSPFGGGSSRGRRQR 81
           VLSDPEKR I D  G D L+   GGGGG    F    D+F++FFGG    G +SRG R R
Sbjct: 54  VLSDPEKRRIVD-LGGDPLESAGGGGGGFGGGFGGLGDVFEAFFGG----GAASRGPRGR 108

Query: 82  --RGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMK-CSGCQGSGMK 138
              G D +  +++ LE+   G +K++++   V+C +C GKG+   +    C  C G G  
Sbjct: 109 VRPGSDSLLRMRLDLEECATGVTKQVTVDTAVLCDRCHGKGTAGDSKPVTCDTCGGRG-- 166

Query: 139 VSIRHLGPSMIQQM--QHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQ 196
             ++ +  S + Q+    PC  C+G GE I D   C +C G+  ++ ++ + V +  G+ 
Sbjct: 167 -EVQTVQRSFLGQVMTSRPCPTCRGVGEVIPDP--CHECAGDGRVRARREITVKIPAGVG 223

Query: 197 NGQKITFPGEADEAP-DTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFV 255
           +G +I    + +  P     GD+   + ++ H  F R GDDL    ++ + +A  G    
Sbjct: 224 DGMRIRLAAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVT 283

Query: 256 ITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQ 315
           +  +      I   PG   +P     +   GMP + R   RG L+ H  V  P  L  + 
Sbjct: 284 VEAILDGPSEITIPPG--TQPGSVITLRGRGMP-HLRSGGRGDLHAHVEVVVPTRLDHED 340

Query: 316 CKMLETV 322
            ++L  +
Sbjct: 341 IELLREL 347

Length = 378

>gnl|CDD|237661 PRK14291, PRK14291, chaperone protein DnaJ; Provisional

 Score =  157 bits (399), Expect = 1e-44
 Identities = 91/323 (28%), Positives = 151/323 (46%), Gaps = 34/323 (10%)

Query: 6   PKKSDNTKYYEILGVSKKRFVLSDPEKREIYDQYGEDALKEGMGGGGGAH--------DP 57
                  K+ EI   ++   VLSDPEKR++YDQ+G  A         G          + 
Sbjct: 37  KNPEAEEKFKEI---NEAYQVLSDPEKRKLYDQFGHAAFSGSGQQQQGQEGFSDFGGGNI 93

Query: 58  FDIFQSFFGGSPFGGG-----SSRGRRQRR-----GEDVIHPLKVSLEDLYNGTSKKLSL 107
            DI +  F    FG       ++R RR+       GED+   +++SLE+ Y GT+  L +
Sbjct: 94  EDILEDVFDIFGFGDIFGRRRATRERRKTYQRPVKGEDIYQTVEISLEEAYTGTTVSLEV 153

Query: 108 SRNVICTKCKGKGSKSGASMK-CSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETI 166
            R V C  C G G   G+  K C  C GSG ++  R        ++   C  C G G   
Sbjct: 154 PRYVPCEACGGTGYDPGSGEKVCPTCGGSG-EIYQR----GGFFRISQTCPTCGGEGVL- 207

Query: 167 NDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAP-DTVTGDIVFVLQQK 225
             ++ C +C G  ++ +K+ ++V +  G+ NG K+  PG+          GD+  +++ K
Sbjct: 208 --REPCSKCNGRGLVIKKETIKVRIPPGVDNGSKLRVPGKGHAGRFGGPPGDLYIIVKVK 265

Query: 226 EHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDE 285
            HP F+R+GD+L+++  +++ EA+ G +  +  LDG++  +K  PG   K      +  +
Sbjct: 266 PHPLFERRGDNLYLDVNITVAEAVLGTELEVPLLDGKKEKVKIPPG--TKEGDKIRVPGK 323

Query: 286 GMPMYQRPFMRGKLYIHFTVDFP 308
           GMP   +    G L +   +D P
Sbjct: 324 GMPRL-KGSGYGDLVVRVHIDVP 345

Length = 382

>gnl|CDD|199909 cd10747, DnaJ_C, C-terminal substrate binding domain of DnaJ and HSP40

 Score =  146 bits (370), Expect = 1e-42
 Identities = 49/135 (36%), Positives = 74/135 (54%), Gaps = 5/135 (3%)

Query: 178 EKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAP-DTVTGDIVFVLQQKEHPKFKRKGDD 236
              ++EKK L V +  G+ +GQ++   GE D  P     GD+  V++ K HP F+R G+D
Sbjct: 28  VTRVREKKTLTVKIPAGVDDGQRLRLRGEGDAGPNGGPPGDLYVVIRVKPHPVFRRDGND 87

Query: 237 LFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMR 296
           L+ E  +SLTEAL G +  +  L G ++ +K  PG   +P     +  +GMP   R   R
Sbjct: 88  LYCEVPISLTEALLGGEIEVPTLGG-KVKLKIPPGT--QPGTVLRLKGKGMPRL-RGGGR 143

Query: 297 GKLYIHFTVDFPESL 311
           G LY+   V+FP+ L
Sbjct: 144 GDLYVEVKVEFPKKL 158

The C-terminal region of the DnaJ/Hsp40 protein mediates oligomerization and binding to denatured polypeptide substrate. DnaJ/Hsp40 is a widely conserved heat-shock protein. It prevents the aggregation of unfolded substrate and forms a ternary complex with both substrate and DnaK/Hsp70; the N-terminal J-domain of DnaJ/Hsp40 stimulates the ATPase activity of DnaK/Hsp70. Length = 158

>gnl|CDD|237660 PRK14289, PRK14289, chaperone protein DnaJ; Provisional

 Score =  150 bits (381), Expect = 7e-42
 Identities = 93/311 (29%), Positives = 159/311 (51%), Gaps = 24/311 (7%)

Query: 26  VLSDPEKREIYDQYGEDALKEGMGGGG------GAHDPF----DIFQSFFGG----SPFG 71
           VLSDP+KR  YDQ+G   +    GGGG         D F    DIF    GG      FG
Sbjct: 57  VLSDPDKRSRYDQFGHAGVGGAAGGGGFSGEGMSMEDIFSMFGDIFGGHGGGFGGFGGFG 116

Query: 72  GGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSK-SGASMKCS 130
           GG S+ +R  RG D+   +K++L+++  G  KK  + + V C+ C G G++ +  S  C 
Sbjct: 117 GGGSQ-QRVFRGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHCHGTGAEGNNGSETCP 175

Query: 131 GCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVI 190
            C+GSG    +++     +Q  Q  C  C G G+ I  K +C +C GE ++  ++V+ V 
Sbjct: 176 TCKGSGSVTRVQNTILGTMQT-QSTCPTCNGEGKII--KKKCKKCGGEGIVYGEEVITVK 232

Query: 191 VEKGMQNGQKITFPGEADEAP-DTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEAL 249
           +  G+  G +++  G+ +      V GD++ V++++ HP+  R  +DL     LS+  A 
Sbjct: 233 IPAGVAEGMQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAA 292

Query: 250 CGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPE 309
            G    +  +DG+   +K + G   +P +   + ++G+P     +  G L ++ +V  PE
Sbjct: 293 LGGAVEVPTIDGK-AKVKIEAG--TQPGKVLRLRNKGLPSVNG-YGTGDLLVNVSVYIPE 348

Query: 310 SLSPDQCKMLE 320
           +LS ++ + LE
Sbjct: 349 TLSKEEKQTLE 359

Length = 386

>gnl|CDD|237657 PRK14281, PRK14281, chaperone protein DnaJ; Provisional

 Score =  149 bits (378), Expect = 2e-41
 Identities = 105/325 (32%), Positives = 157/325 (48%), Gaps = 42/325 (12%)

Query: 26  VLSDPEKREIYDQYGED------ALKEGMGGGGGAHDPFDIFQSF---FGGSP------- 69
           VLS+ +KR  YDQ+G        A   G G GGG  D  DIF +F   FGG         
Sbjct: 55  VLSNDDKRRRYDQFGHAGVGSSAASGGGPGYGGGGGDFNDIFSAFNDMFGGGARRGGGSP 114

Query: 70  ------FGGGSSRGRRQR--RGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGS 121
                 FGGG  R R      G D+   LK++LE++  G  K L + + V C +C G GS
Sbjct: 115 FGFEDVFGGGGRRRRASAGIPGTDLKIRLKLTLEEIAKGVEKTLKIKKQVPCKECNGTGS 174

Query: 122 KSGASMKCSGCQGSGMKVSIRHLGPSMIQQMQH--PCNECKGTGETINDKDRCPQCKGEK 179
           K+GA+  C  C GSG    +R    +M  Q  +   C  C G G  +  KDRCP C GE 
Sbjct: 175 KTGATETCPTCHGSG---EVRQASKTMFGQFVNITACPTCGGEGRVV--KDRCPACYGEG 229

Query: 180 VIQEKKVLEVIVEKGMQNGQKITFPGEADEAP-DTVTGDIVFVLQQKEHPKFKRKGDDLF 238
           + Q +  ++V V  G+Q+G  +T  G+ +  P     GD++ V+++K H  F R GDD+ 
Sbjct: 230 IKQGEVTVKVTVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVI 289

Query: 239 VEHTLSLTEALCGFQFVITHLDGR-QLLIK--SQPGEVVKPDQFKAINDEGMPMYQRPFM 295
               +S  + + G +  +  LDG  +L I   +QP  +++      I  +G+  + R   
Sbjct: 290 YNLAVSYPDLVLGTKVEVPTLDGAVKLTIPAGTQPETMLR------IPGKGIG-HLRGSG 342

Query: 296 RGKLYIHFTVDFPESLSPDQCKMLE 320
           RG  Y+   V  P+ +S    ++L+
Sbjct: 343 RGDQYVRVNVFVPKEVSHQDKELLK 367

Length = 397

>gnl|CDD|237663 PRK14293, PRK14293, chaperone protein DnaJ; Provisional

 Score =  148 bits (376), Expect = 3e-41
 Identities = 108/361 (29%), Positives = 158/361 (43%), Gaps = 70/361 (19%)

Query: 14  YYEILGVSK-----------------------------KRF--------VLSDPEKREIY 36
           YYEILGVS+                              RF        VLSDPE R  Y
Sbjct: 5   YYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDPETRARY 64

Query: 37  DQYGEDALKEGMGGGGGAHDP-----F-DIFQSFFGGSPFGGGSSRGRRQRR-----GED 85
           DQ+GE     G+ G  G  D      F DIF++FF G  FGG   +G R+RR     G+D
Sbjct: 65  DQFGE----AGVSGAAGFPDMGDMGGFADIFETFFSG--FGGAGGQGGRRRRRGPQRGDD 118

Query: 86  VIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSG-ASMKCSGCQGSG-MKVSIRH 143
           + + LK+   +   G  K++ +     C  C+G G+K G     CS C G+G ++ + R 
Sbjct: 119 LRYDLKLDFREAIFGGEKEIRIPHLETCETCRGSGAKPGTGPTTCSTCGGAGQVRRATRT 178

Query: 144 LGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITF 203
              S  Q     C  C GTG+ I D   C  C G+ V Q  K L++ +  G+  G ++  
Sbjct: 179 PFGSFTQ--VSECPTCNGTGQVIEDP--CDACGGQGVKQVTKKLKINIPAGVDTGTRLRV 234

Query: 204 PGEADEAP-DTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGR 262
            GE D        GD+   L  K  P+F+R G ++  E  +S  +A+ G    +  +DG 
Sbjct: 235 SGEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVDGP 294

Query: 263 QLLI---KSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKML 319
             L     +QP  V+       + ++G+P    P  RG   I   V  P  +S ++ ++L
Sbjct: 295 VELTIPAGTQPNTVLT------LENKGVPRLGNPVARGDHLITVKVKIPTRISDEERELL 348

Query: 320 E 320
           E
Sbjct: 349 E 349

Length = 374

>gnl|CDD|237664 PRK14294, PRK14294, chaperone protein DnaJ; Provisional

 Score =  147 bits (374), Expect = 5e-41
 Identities = 91/305 (29%), Positives = 138/305 (45%), Gaps = 25/305 (8%)

Query: 26  VLSDPEKREIYDQYGEDALK-EGMGGGGGAHDPF----DIFQSFFGGSPFGGGSSRGRRQ 80
           VLSDP+KR IYDQYG + L   G  G  G  D F    DIF+ FFG    G         
Sbjct: 56  VLSDPKKRGIYDQYGHEGLSGTGFSGFSGFDDIFSSFGDIFEDFFGFG-GGRRGRSRTAV 114

Query: 81  RRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMK-CSGCQGSGMKV 139
           R G D+ + L +   +   GT K++ + +   C +C G G + G S   C  C GSG   
Sbjct: 115 RAGADLRYDLTLPFLEAAFGTEKEIRIQKLETCEECHGSGCEPGTSPTTCPQCGGSGQ-- 172

Query: 140 SIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQ 199
             +  G   I+     C  C+G G+ I     C  C G+  ++  K ++V +  G+  G 
Sbjct: 173 VTQSQGFFSIRTT---CPRCRGMGKVI--VSPCKTCHGQGRVRVSKTVQVKIPAGVDTGS 227

Query: 200 KITFPGEADEA-PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITH 258
           ++   GE +        GD+   L  + H  F+R G+D+  +  +S  +A  G Q  +  
Sbjct: 228 RLRLRGEGEAGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPT 287

Query: 259 LDG-RQLLIK--SQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQ 315
           L+G R+L I   +QPG++ +         +G+P   R   RG   I   V  P  L+  Q
Sbjct: 288 LEGERELKIPKGTQPGDIFR------FKGKGIPSL-RGGGRGDQIIEVEVKVPTRLTKKQ 340

Query: 316 CKMLE 320
            ++L 
Sbjct: 341 EELLT 345

Length = 366

>gnl|CDD|184604 PRK14283, PRK14283, chaperone protein DnaJ; Provisional

 Score =  147 bits (373), Expect = 8e-41
 Identities = 94/320 (29%), Positives = 154/320 (48%), Gaps = 39/320 (12%)

Query: 20  VSKKRFVLSDPEKREIYDQYGEDALKEGMGGGGGAHDPF------DIFQSFFGGS----- 68
           +S+   VLSD EKR+ YDQ+G      GM G     D F      DIFQ F  G      
Sbjct: 50  ISEAYAVLSDDEKRQRYDQFGH----AGMDGFS-QEDIFNNINFEDIFQGFGFGIGNIFD 104

Query: 69  --PFGGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGAS 126
              FGGGS  G   +RG D+   ++++LE+  +G  K + +     C  C G  ++ G+ 
Sbjct: 105 MFGFGGGSRHG--PQRGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVCNGSRAEPGSE 162

Query: 127 MK-CSGCQGSGMKVSIRHLGPSMIQQMQH--PCNECKGTGETINDKDRCPQCKGEKVIQE 183
           +K C  C G+G    +R+   +++ QM +   C +C+G G+ +  +  C  C G+ V++E
Sbjct: 163 VKTCPTCGGTGQVKQVRN---TILGQMMNVTTCPDCQGEGKIV--EKPCSNCHGKGVVRE 217

Query: 184 KKVLEVIVEKGMQNGQKITFPGEADEA-PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHT 242
            K + V +  G++ G ++   GE +        GD+  V++ K H  F+R+G +L+ E  
Sbjct: 218 TKTISVKIPAGVETGSRLRVSGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKP 277

Query: 243 LSLTEALCGFQFVITHLDGRQLL---IKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKL 299
           +S  +A  G    +  +DG   L     +Q G   +      +   GMP  +    +G L
Sbjct: 278 ISFVQAALGDTVDVPTIDGPVELKIPAGTQSGTTFR------LKGHGMPSLRWS-GKGNL 330

Query: 300 YIHFTVDFPESLSPDQCKML 319
           Y+   V  P+ LSP Q ++L
Sbjct: 331 YVKVKVVVPKKLSPKQKELL 350

Length = 378

>gnl|CDD|237662 PRK14292, PRK14292, chaperone protein DnaJ; Provisional

 Score =  143 bits (361), Expect = 4e-39
 Identities = 93/303 (30%), Positives = 150/303 (49%), Gaps = 20/303 (6%)

Query: 26  VLSDPEKREIYDQYGEDALKEGMGGG----GGAHDPFDIFQSFFGGSPFGGGSSRGRRQR 81
           VLSD EKR  YD++G  A   GM GG    G   DP DIF+  FGG+ FGGG  R R   
Sbjct: 53  VLSDAEKRAHYDRFGT-APGAGMPGGDPFGGMGFDPMDIFEQLFGGAGFGGGRGR-RGPA 110

Query: 82  RGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGAS--MKCSGCQGSGMKV 139
           RG+D+    +++LE    G   ++ + R   C  C G  ++ G      C  C+G+G   
Sbjct: 111 RGDDLETEARITLEQARAGEEVEVEVDRLTECEHCHGSRTEPGGKPPKTCPTCRGAG--- 167

Query: 140 SIRHLGPSM--IQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQN 197
           ++R    ++  + + Q PC  C+G G+ I D   C  C+G     + + ++V + +G+  
Sbjct: 168 AVRAQARTIFGVVETQQPCPTCRGEGQIITDP--CTVCRGRGRTLKAETVKVKLPRGIDE 225

Query: 198 GQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVIT 257
           G +I   G  +E P    GD+   ++ + HP+ +R+ + L  E  +   +A  G Q  + 
Sbjct: 226 GYRIRVAGMGNEGPGG-NGDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVP 284

Query: 258 HLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCK 317
            LDG Q +I+ +PG   +      +  +GMP  Q     G L + + +  P+ LSP+  +
Sbjct: 285 TLDGPQ-VIEVKPG--TQHGDLHRLRGQGMPRLQGAGT-GDLIVEYEIAVPKQLSPEARE 340

Query: 318 MLE 320
            LE
Sbjct: 341 ALE 343

Length = 371

>gnl|CDD|237668 PRK14301, PRK14301, chaperone protein DnaJ; Provisional

 Score =  142 bits (360), Expect = 5e-39
 Identities = 100/309 (32%), Positives = 145/309 (46%), Gaps = 33/309 (10%)

Query: 26  VLSDPEKREIYDQYGEDALKEGMGGGGG---AHDPF----DIFQSFFGGSPFGGGSSRGR 78
           VL D EKR  YD++G   +  G GG GG   A D F    DIF   FG S  GGGS RG 
Sbjct: 56  VLRDAEKRARYDRFGHAGVN-GNGGFGGFSSAEDIFSHFSDIFGDLFGFS--GGGSRRGP 112

Query: 79  RQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMK-CSGCQGSGM 137
           R + G D+ + L VS      G    L + +NV C  C G G+  G S + C  C GSG 
Sbjct: 113 RPQAGSDLRYNLTVSFRQAAKGDEVTLRIPKNVTCDDCGGSGAAPGTSPETCRHCGGSGQ 172

Query: 138 KVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQN 197
               +        Q+  PC  C+G G  I     CP+CKG  ++Q+ + L+V +  G+  
Sbjct: 173 VRQSQGFF-----QIAVPCPVCRGEGRVI--THPCPKCKGSGIVQQTRELKVRIPAGVDT 225

Query: 198 GQKITFPGEADEAPDT---VTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQF 254
           G ++   GE +  P       GD+  V+  ++   F+R+G DL V   +S  +A  G + 
Sbjct: 226 GSRLRLRGEGE--PGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRI 283

Query: 255 VITHLDGR-QLLIK--SQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESL 311
            +  LD    L I   +Q GEV +      +  +G+P Y     +G L +  +V  P  L
Sbjct: 284 EVPTLDDPVTLDIPKGTQSGEVFR------LRGKGLP-YLGSSQKGDLLVEVSVVTPTKL 336

Query: 312 SPDQCKMLE 320
           +  Q ++L 
Sbjct: 337 TKRQEELLR 345

Length = 373

>gnl|CDD|172774 PRK14286, PRK14286, chaperone protein DnaJ; Provisional

 Score =  140 bits (354), Expect = 4e-38
 Identities = 95/308 (30%), Positives = 158/308 (51%), Gaps = 24/308 (7%)

Query: 26  VLSDPEKREIYDQYGEDALKEGMGG-GGGAHDPF--------DIFQSFFGGSPFGGGSSR 76
           +L DP+KR+ YDQ+G+  +  G GG G GA+  F        DIF  FFGG   GGGS  
Sbjct: 56  ILRDPKKRQAYDQFGKAGVNAGAGGFGQGAYTDFSDIFGDFGDIFGDFFGGGR-GGGSGG 114

Query: 77  GRRQ--RRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGAS-MKCSGCQ 133
           GRR   +RG D+ + L+VSLED   G   K+ + R   C  C G G+  G+S   C  C 
Sbjct: 115 GRRSGPQRGSDLRYNLEVSLEDAALGREYKIEIPRLESCVDCNGSGASKGSSPTTCPDCG 174

Query: 134 GSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEK 193
           GSG    IR         +   C  C+G G  I++   C  C G+ + ++++ + + +  
Sbjct: 175 GSG---QIRR--TQGFFSVATTCPTCRGKGTVISNP--CKTCGGQGLQEKRRTINIKIPP 227

Query: 194 GMQNGQKITFPGEADEAPD-TVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGF 252
           G++ G ++   GE +  P+    GD+  V   K+H  F+R+G+DL +   +SL +A+ G 
Sbjct: 228 GVETGSRLKVSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGA 287

Query: 253 QFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLS 312
           +  +  +DG++  +K   G   +  Q   +   GMP Y   + +G  ++   ++ P+ ++
Sbjct: 288 EIEVPTIDGKKAKMKIPEG--TESGQVFRLKGHGMP-YLGAYGKGDQHVIVKIEIPKKIT 344

Query: 313 PDQCKMLE 320
             Q +++E
Sbjct: 345 RRQRELIE 352

Length = 372

>gnl|CDD|184599 PRK14277, PRK14277, chaperone protein DnaJ; Provisional

 Score =  139 bits (352), Expect = 1e-37
 Identities = 95/314 (30%), Positives = 153/314 (48%), Gaps = 31/314 (9%)

Query: 26  VLSDPEKREIYDQYGEDALKEG--------MGGGGGAHDPF------DIFQSFFGGSPFG 71
           +LSDP+KR  YDQ+G  A   G         GG GG    F      DIF+  FG   FG
Sbjct: 57  ILSDPQKRAQYDQFGHAAFDPGGFGQGGFGQGGFGGGGFDFDFGGFGDIFEDIFG-DFFG 115

Query: 72  GGSSRGRR-QRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGAS-MKC 129
            G  R     ++G D+ + L+++ E+   GT K++ + R   C  CKG G+K G+  + C
Sbjct: 116 TGRRRAETGPQKGADIRYDLELTFEEAAFGTEKEIEVERFEKCDVCKGSGAKPGSKPVTC 175

Query: 130 SGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEV 189
             C G+G +V  R   P         C+ C G G+ I   D C +C G   I+ ++ ++V
Sbjct: 176 PVCHGTG-QVRTRQNTPFGRIVNIRTCDRCHGEGKII--TDPCNKCGGTGRIRRRRKIKV 232

Query: 190 IVEKGMQNGQKITFPGEADEA-PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEA 248
            +  G+ +GQ IT  GE +        GD+  V++ K HP FKR+G ++++E  ++ T+A
Sbjct: 233 NIPAGIDDGQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDA 292

Query: 249 LCGFQFVITHLDGRQLLI---KSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTV 305
             G +  I  LDG+        +Q G   +      +  +G+P + R   RG   +   +
Sbjct: 293 ALGGEIEIPTLDGKVKFTIPEGTQTGTKFR------LRGKGIP-HLRGRGRGDQIVKVYI 345

Query: 306 DFPESLSPDQCKML 319
           + P+ L+  Q ++L
Sbjct: 346 EVPKKLTEKQKELL 359

Length = 386

>gnl|CDD|237656 PRK14280, PRK14280, chaperone protein DnaJ; Provisional

 Score =  138 bits (350), Expect = 1e-37
 Identities = 107/357 (29%), Positives = 165/357 (46%), Gaps = 66/357 (18%)

Query: 14  YYEILGVSK---------------KRF----------------------VLSDPEKREIY 36
           YYE+LGVSK               K++                      VLSD +KR  Y
Sbjct: 6   YYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDQKRAQY 65

Query: 37  DQYGEDALKEGMGGGGGAHDPF-------DIFQSFFGGSPFGGGSSRGRRQ-----RRGE 84
           DQ+G     +G GGGG     F       DIF SFFGG         GRR+     R+G 
Sbjct: 66  DQFGHAGPNQGFGGGGFGGGDFGGGFGFEDIFSSFFGGG--------GRRRDPNAPRQGA 117

Query: 85  DVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMK-CSGCQGSGMKVSIRH 143
           D+ + + ++ E+   G  K++ + +   C  C G G+K G S + CS C GSG +VS+  
Sbjct: 118 DLQYTMTLTFEEAVFGKEKEIEIPKEETCDTCHGSGAKPGTSKETCSHCGGSG-QVSVEQ 176

Query: 144 LGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITF 203
             P      +  C  C GTG+ I  K++CP C G+  ++++K + V +  G+ NGQ+I  
Sbjct: 177 NTPFGRVVNRQTCPHCNGTGQEI--KEKCPTCHGKGKVRKRKKINVKIPAGVDNGQQIRV 234

Query: 204 PGEADEAPD-TVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGR 262
            GE +   +    GD+  V + + H  F+R GDD++ E  L+  +A  G +  +  L G+
Sbjct: 235 SGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVPTLHGK 294

Query: 263 QLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKML 319
             L    P       QF+ +  +G+P   R + +G  Y+   V  P  L+  Q ++L
Sbjct: 295 VKL--KIPAGTQTGTQFR-LKGKGVPNV-RGYGQGDQYVVVRVVTPTKLTDRQKELL 347

Length = 376

>gnl|CDD|172778 PRK14290, PRK14290, chaperone protein DnaJ; Provisional

 Score =  137 bits (347), Expect = 3e-37
 Identities = 99/328 (30%), Positives = 150/328 (45%), Gaps = 30/328 (9%)

Query: 7   KKSDNTKYYEILGVSKKRFVLSDPEKREIYDQYGEDALKEGMGGGGGAHDPF-------D 59
           K     K+ EI   S+   VLSDP+KR  YDQ G   +  G GG     D F       D
Sbjct: 40  KAEAEEKFKEI---SEAYEVLSDPQKRRQYDQTG--TVDFGAGGSNFNWDNFTHFSDIND 94

Query: 60  IFQSFFGG---SPFGGGSSRGRRQRRGE-DVIHPLKVSLEDLYNGTSKKLSLSRNVICTK 115
           IF   FGG   S F  G    +  R  + D+   L +SLED Y GT K++   RN +C  
Sbjct: 95  IFNQIFGGNFGSDFFSGFGNQQSTRNIDLDIYTNLDISLEDAYYGTEKRIKYRRNAMCPD 154

Query: 116 CKGKGSKSGASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQC 175
           C G G+K+G  + C  C G+G +  +R  G   +  +   C  C G G    +K  CP+C
Sbjct: 155 CSGTGAKNGKLITCPTCHGTGQQRIVRGQGFFRMVTVTT-CRTCGGRGRIPEEK--CPRC 211

Query: 176 KGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGD 235
            G   +   + + V + KG  +  ++   G+  ++    TGD+  VL+    P  +R  D
Sbjct: 212 NGTGTVVVNEDISVKIPKGATDNLRLRVKGKG-QSYGGRTGDLYVVLRVNNDPNIQRIND 270

Query: 236 DLFVEHTLSLTEALCGFQFVITHLDGRQLL---IKSQPGEVVKPDQFKAINDEGMPMYQR 292
           DL+V+  ++  +A  G +  I     +  L     +QPGEV+K      I   GMP +  
Sbjct: 271 DLYVDQKINFPQAALGGEIEIKLFREKYNLKIPEGTQPGEVLK------IKGAGMP-HLN 323

Query: 293 PFMRGKLYIHFTVDFPESLSPDQCKMLE 320
               G L +   V+ P+ L+  Q +++ 
Sbjct: 324 GHGSGDLLVRINVEVPKRLTSKQKELIR 351

Length = 365

>gnl|CDD|184611 PRK14297, PRK14297, chaperone protein DnaJ; Provisional

 Score =  137 bits (346), Expect = 6e-37
 Identities = 93/306 (30%), Positives = 150/306 (49%), Gaps = 29/306 (9%)

Query: 26  VLSDPEKREIYDQYGEDALKEGMGGGGGAHDPF---------DIFQSFFGGSPFGGGSSR 76
           VLSDP+K+  YDQ+G        G G G    F         DIF SFFGG  FG  S R
Sbjct: 56  VLSDPQKKAQYDQFGTADFNGAGGFGSGGFGGFDFSDMGGFGDIFDSFFGGG-FGSSSRR 114

Query: 77  GRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMK-CSGCQGS 135
               +RG D+ + + ++ E+   G  K++S++RN  C  C G G+K G S K C  C G+
Sbjct: 115 RNGPQRGADIEYTINLTFEEAVFGVEKEISVTRNENCETCNGTGAKPGTSPKTCDKCGGT 174

Query: 136 GMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGM 195
           G ++ ++   P         C++C G+G+ I  +D C +C G+  +++ + ++V V  G+
Sbjct: 175 G-QIRVQRNTPLGSFVSTTTCDKCGGSGKVI--EDPCNKCHGKGKVRKNRKIKVNVPAGV 231

Query: 196 QNGQKITFPGEADEAPDT-VTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQF 254
             G  I   G+ +   +   TGD+   ++   H  FKRKG D++++  +S  +A  G + 
Sbjct: 232 DTGNVIPLRGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEI 291

Query: 255 VITHLDGR---QLLIKSQPGEV--VKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPE 309
            +  +DG    ++   +QPG V  +K      +N  G         RG  Y+   VD P+
Sbjct: 292 KVPTVDGEVKYEVPAGTQPGTVFRLKGKGVPRVNSTG---------RGNQYVTVIVDIPK 342

Query: 310 SLSPDQ 315
            L+  Q
Sbjct: 343 KLNSKQ 348

Length = 380

>gnl|CDD|172773 PRK14285, PRK14285, chaperone protein DnaJ; Provisional

 Score =  137 bits (345), Expect = 7e-37
 Identities = 95/309 (30%), Positives = 157/309 (50%), Gaps = 25/309 (8%)

Query: 26  VLSDPEKREIYDQYGEDALKEGMG------GGGGAHDPF----DIFQSFFGGSPFGGGSS 75
           VL D  KR  YD++G  A + G G      G  G  D F    DIF SFF G+    G  
Sbjct: 55  VLIDDNKRAQYDRFGHTAFEGGGGFEGFSGGFSGFSDIFEDFGDIFDSFFTGNR---GQD 111

Query: 76  RGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMK-CSGCQG 134
           + R+  +G+D+ + +++SLED Y G    ++++RN++C  C GK S+ G S   C+ C G
Sbjct: 112 KNRKHEKGQDLTYQIEISLEDAYLGYKNNINITRNMLCESCLGKKSEKGTSPSICNMCNG 171

Query: 135 SGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKG 194
           SG     R +      ++   C +C G G+ I++   C  CKG+  +++K+ +E+ +  G
Sbjct: 172 SG-----RVMQGGGFFRVTTTCPKCYGNGKIISNP--CKSCKGKGSLKKKETIELKIPAG 224

Query: 195 MQNGQKITFPGEADEAPDTVT-GDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQ 253
           + + Q+I   G+    PD    GD+   +  K H  FKR G DL+    +S T+A  G +
Sbjct: 225 IDDNQQIKMRGKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKE 284

Query: 254 FVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSP 313
             I  +  +++ IK   G   + D+   I +EGMP+       G L +   +  P++L+ 
Sbjct: 285 IKIQTIASKKIKIKIPKG--TENDEQIIIKNEGMPILHTEKF-GNLILIIKIKTPKNLNS 341

Query: 314 DQCKMLETV 322
           +  K+LE +
Sbjct: 342 NAIKLLENL 350

Length = 365

>gnl|CDD|237653 PRK14276, PRK14276, chaperone protein DnaJ; Provisional

 Score =  132 bits (334), Expect = 3e-35
 Identities = 85/291 (29%), Positives = 128/291 (43%), Gaps = 55/291 (18%)

Query: 10  DNTKYYEILGVSK---------------KRF----------------------VLSDPEK 32
           +NT+YY+ LGVSK               K++                       LSDP+K
Sbjct: 2   NNTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLSDPQK 61

Query: 33  REIYDQYGEDALKEGMGGGGGAHDPF----------DIFQSFFGGSPFGGGSSRGRRQRR 82
           R  YDQYG      G GGG G    F          DIF SFFGG   GG        R+
Sbjct: 62  RAAYDQYGAAGANGGFGGGAGGFGGFDGSGGFGGFEDIFSSFFGG---GGARRNPNAPRQ 118

Query: 83  GEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGAS-MKCSGCQGSGMKVSI 141
           G+D+ + + +  E+   G  K++S +R   C  C G G+K G S + C  C GSG+    
Sbjct: 119 GDDLQYRVNLDFEEAIFGKEKEVSYNREATCHTCNGSGAKPGTSPVTCGKCHGSGVITVD 178

Query: 142 RHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKI 201
                 M+++ Q  C+ C GTG+ I  K+ C  C G    ++   + V +  G++ GQ+I
Sbjct: 179 TQTPLGMMRR-QVTCDVCHGTGKEI--KEPCQTCHGTGHEKQAHTVSVKIPAGVETGQQI 235

Query: 202 TFPGEADEAPD-TVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCG 251
              G+ +   +    GD+  V + +   KF+R G  ++    +S  +A  G
Sbjct: 236 RLQGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALG 286

Length = 380

>gnl|CDD|184603 PRK14282, PRK14282, chaperone protein DnaJ; Provisional

 Score =  131 bits (331), Expect = 6e-35
 Identities = 97/363 (26%), Positives = 156/363 (42%), Gaps = 66/363 (18%)

Query: 14  YYEILGVSK-------------------------------KRF--------VLSDPEKRE 34
           YYEILGVS+                               ++F        VLSDP+KR 
Sbjct: 6   YYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRA 65

Query: 35  IYDQYG----EDALKEGMGGGGGAHDPF---------DIFQSFFGGSPFGGGSSRGRRQR 81
           +YD++G    +   +E   GGG   D F         DIF  FFG         +    R
Sbjct: 66  MYDRFGYVGEQPPYQETESGGGFFEDIFKDFENIFNRDIFDIFFGERR--TQEEQREYAR 123

Query: 82  RGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGAS-MKCSGCQGSGMKVS 140
           RGED+ + ++V+L DL NG    +   R   C  C G G + G+  + C  C G+G    
Sbjct: 124 RGEDIRYEIEVTLSDLINGAEIPVEYDRYETCPHCGGTGVEPGSGYVTCPKCHGTGR--- 180

Query: 141 IRHLGPSMIQQM--QHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNG 198
           IR    S       +  C  C GTG+     + C +C G   I+ +    V +  G+++G
Sbjct: 181 IREERRSFFGVFVSERTCERCGGTGKIP--GEYCHECGGSGRIRRRVRTTVKIPAGVEDG 238

Query: 199 QKITFPGEADEAPD-TVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVIT 257
             +   G  +        GD+  +++ +  P+FKR G DL  + T+   +A+ G    + 
Sbjct: 239 TVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTVEVP 298

Query: 258 HLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCK 317
             +G   ++K  PG   +P+    +  +G+P   R   RG L ++  V+ P+ LS ++ K
Sbjct: 299 LPEGGTTMLKIPPG--TQPETVFRLKGKGLPN-MRYGRRGDLIVNVHVEIPKRLSREERK 355

Query: 318 MLE 320
           +L+
Sbjct: 356 LLK 358

Length = 369

>gnl|CDD|237666 PRK14296, PRK14296, chaperone protein DnaJ; Provisional

 Score =  126 bits (319), Expect = 3e-33
 Identities = 86/310 (27%), Positives = 154/310 (49%), Gaps = 19/310 (6%)

Query: 26  VLSDPEKREIYDQYGEDALKEGMGGGGGAHDPFDIFQSF--FGGSPFGG------GSSRG 77
           VL D +KR+ YDQ+G  A     G      D  D+F +    G S F        GS++ 
Sbjct: 55  VLLDKDKRKQYDQFGHAAFDGSSGFSSNFGDFEDLFSNMGSSGFSSFTNIFSDFFGSNKS 114

Query: 78  RRQR--RGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMK-CSGCQG 134
             QR  +G+ V   + ++ ++L  G  K + L     C+KC G G++S + +  C+ C G
Sbjct: 115 DYQRSTKGQSVSLDIYLTFKELLFGVDKIIELDLLTNCSKCFGSGAESNSDIHICNNCHG 174

Query: 135 SGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKG 194
           +G  +  +++G    QQ    CN C G G+ I  K++C  CKG+    E+K +EV + KG
Sbjct: 175 TGEVLVQKNMGFFQFQQ-SAKCNVCNGAGKII--KNKCKNCKGKGKYLERKKIEVNIPKG 231

Query: 195 MQNGQKITFPGEADEAPDT-VTGDIVFVLQQKEHPKFKR-KGDDLFVEHTLSLTEALCGF 252
           ++  Q+I    +   + +  V GD++  +  KE   F+    +D+ + + +S  +A+ G 
Sbjct: 232 IRPNQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMTYNISYLDAILGN 291

Query: 253 QFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLS 312
           + +I  LDG    IK +  + +  ++   IN++G+        RG L I   +  P++LS
Sbjct: 292 EIIIKTLDGD---IKYKLPKSINSNELIIINNKGLYKSINKDKRGDLIIKVNIVVPKNLS 348

Query: 313 PDQCKMLETV 322
             + +++E +
Sbjct: 349 KKEKELIEQI 358

Length = 372

>gnl|CDD|237658 PRK14284, PRK14284, chaperone protein DnaJ; Provisional

 Score =  123 bits (311), Expect = 7e-32
 Identities = 105/371 (28%), Positives = 151/371 (40%), Gaps = 70/371 (18%)

Query: 12  TKYYEILGVSK------------------------------KRF--------VLSDPEKR 33
             YY ILGVSK                              KRF        VLSD +KR
Sbjct: 1   MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKR 60

Query: 34  EIYDQYGEDALKEGMGGGGGA-----HDPFDIFQSFFGGSPFGGGS-------------- 74
           E YD+YG+D    G GG GGA      D    F   FGG   GGGS              
Sbjct: 61  ESYDRYGKDGPFAGAGGFGGAGMGNMEDALRTFMGAFGGEFGGGGSFFEGLFGGLGEAFG 120

Query: 75  --SRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMK-CSG 131
                   R+G      + +S E+   G  K+L +S    C  C G G+ S   +K C  
Sbjct: 121 MRGGPAGARQGASKKVHITLSFEEAAKGVEKELLVSGYKSCDACSGSGANSSQGIKVCDR 180

Query: 132 CQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIV 191
           C+GSG  V  R         M   C EC G G  I D   C  C+G+  I++K+ + V +
Sbjct: 181 CKGSGQVVQSRGFF-----SMASTCPECGGEGRVITDP--CSVCRGQGRIKDKRSVHVHI 233

Query: 192 EKGMQNGQKITFPGEADEAPDTV-TGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALC 250
             G+ +G ++   G  D   +    GD+   +  + HP F+R+GDDL +E  +   +A  
Sbjct: 234 PAGVDSGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAAL 293

Query: 251 GFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPES 310
           G +  I  L        + P E ++      +  +G P       RG L +  +V+ P++
Sbjct: 294 GMKKEIPTLLKEGTCRLTIP-EGIQSGTILKVRGQGFPNVHGK-GRGDLLVRISVETPQN 351

Query: 311 LSPDQCKMLET 321
           LS +Q ++L  
Sbjct: 352 LSEEQKELLRQ 362

Length = 391

>gnl|CDD|184612 PRK14298, PRK14298, chaperone protein DnaJ; Provisional

 Score =  123 bits (309), Expect = 9e-32
 Identities = 100/323 (30%), Positives = 149/323 (46%), Gaps = 37/323 (11%)

Query: 13  KYYEILGVSKKRFVLSDPEKREIYDQYG----------EDALKEGMGGGGGAHDPFDIFQ 62
           K+ EI   S+   VLSD EKR  YD++G          ED  +    GG G     DIF+
Sbjct: 46  KFKEI---SEAYAVLSDAEKRAQYDRFGHAGIDNQYSAEDIFRGADFGGFG-----DIFE 97

Query: 63  SFFGGSPFGGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSK 122
            FFGG    GG       RRG D+ + L ++LE+   G  K + + R   C+ C G G+K
Sbjct: 98  MFFGG----GGRRGRMGPRRGSDLRYDLYITLEEAAFGVRKDIDVPRAERCSTCSGTGAK 153

Query: 123 SGASMK-CSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVI 181
            G S K C  C G+G   + R   P         C+ C G G+ I     CP C G   +
Sbjct: 154 PGTSPKRCPTCGGTGQVTTTRS-TPLGQFVTTTTCSTCHGRGQVIESP--CPVCSGTGKV 210

Query: 182 QEKKVLEVIVEKGMQNGQKITFPGEADE-APDTVTGDIVFVLQQKEHPKFKRKGDDLFVE 240
           ++ + + V V  G  +G ++   GE +  +P   +GD+  VL  KEH  F+R GDD+  E
Sbjct: 211 RKTRKITVNVPAGADSGLRLKLSGEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISE 270

Query: 241 HTLSLTEALCGFQFVITHLDGR-QLLIKS--QPGEVVKPDQFKAINDEGMPMYQRPFMRG 297
             +S T+A  G   ++  L G+ ++ I    Q   V +      + D+GMP       +G
Sbjct: 271 IPISFTQAALGADIMVPTLYGKVKMNIPPGTQTHSVFR------LKDKGMPRLH-GHGKG 323

Query: 298 KLYIHFTVDFPESLSPDQCKMLE 320
              +   V  P  L+ +Q ++L 
Sbjct: 324 DQLVKVIVKTPTKLTQEQKELLR 346

Length = 377

>gnl|CDD|172788 PRK14300, PRK14300, chaperone protein DnaJ; Provisional

 Score =  120 bits (303), Expect = 5e-31
 Identities = 95/310 (30%), Positives = 155/310 (50%), Gaps = 31/310 (10%)

Query: 26  VLSDPEKREIYDQYGEDALKEGMG-GGGGAHDPF-----DIFQSFFGGSPFGGGSSRGR- 78
           VL D +KR  YD++G DA +     GGGG H  F     DIF  FF  S F GGS R R 
Sbjct: 54  VLKDEQKRAAYDRFGHDAFQNQQSRGGGGNHGGFHPDINDIFGDFF--SDFMGGSRRSRP 111

Query: 79  --RQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASM-KCSGCQGS 135
              + RG D+ + L ++LE+ ++G  K +S S  V C  C G GS+ G ++  C  C G 
Sbjct: 112 TSSKVRGSDLKYNLTINLEEAFHGIEKNISFSSEVKCDTCHGSGSEKGETVTTCDACSG- 170

Query: 136 GMKVSIRHLGPSMIQQ----MQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIV 191
                   +G + +QQ    ++  C++C+G G+ I  K+ C +C G     +++ L V +
Sbjct: 171 --------VGATRMQQGFFTIEQACHKCQGNGQII--KNPCKKCHGMGRYHKQRNLSVNI 220

Query: 192 EKGMQNGQKITFPGEADEA-PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALC 250
             G++NG +I   GE +       +GD+   +  K H  +K  G +L  +  +S   A  
Sbjct: 221 PAGVENGTRIRHTGEGEAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAAL 280

Query: 251 GFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPES 310
           G +  +  ++G ++ + + P      DQ + +  +GM    R  +RG +  H  V+ P++
Sbjct: 281 GGEIEVPVIEGGKVNL-TIPAGTQNGDQLR-LRSKGMSKM-RSTIRGDMLTHIHVEVPKN 337

Query: 311 LSPDQCKMLE 320
           LS  Q ++LE
Sbjct: 338 LSKRQRELLE 347

Length = 372

>gnl|CDD|237665 PRK14295, PRK14295, chaperone protein DnaJ; Provisional

 Score =  118 bits (298), Expect = 4e-30
 Identities = 98/326 (30%), Positives = 148/326 (45%), Gaps = 38/326 (11%)

Query: 20  VSKKRFVLSDPEKREIYDQ----YGEDALKEGMGGGGGAHDPFDIFQSFFGGSPFGGGSS 75
           +S+   VLSD +KR+ YD+    +G    + G GGGGG    FD+   F GG+  GGG+ 
Sbjct: 55  ISEAYDVLSDEKKRKEYDEARSLFGNGGFRPGPGGGGGGGFNFDLGDLFGGGAQGGGGAG 114

Query: 76  ---------------RGRR--QRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKG 118
                           GRR   RRG DV   + +S  +  +G +  L L+    C  C G
Sbjct: 115 GGGGLGDVFGGLFNRGGRRTQPRRGADVESEVTLSFTEAIDGATVPLRLTSQAPCPACSG 174

Query: 119 KGSKSGASMK-CSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKG 177
            G+K+G + + C  C G+G  VS    G S+ +    PC +CKG G   +D   C  CKG
Sbjct: 175 TGAKNGTTPRVCPTCSGTGQ-VSRNSGGFSLSE----PCPDCKGRGLIADDP--CLVCKG 227

Query: 178 EKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDT---VTGDIVFVLQQKEHPKFKRKG 234
               +  + ++V +  G+ +GQ+I   G+   AP       GD+  V+    HP F R G
Sbjct: 228 SGRAKSSRTMQVRIPAGVSDGQRIRLRGKG--APGERGGPAGDLYVVVHVDPHPVFGRSG 285

Query: 235 DDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPF 294
           D+L V   ++  EA  G +  +  L G  + +K  PG        + +   G    ++  
Sbjct: 286 DNLTVTVPVTFPEAALGAEVRVPTLGGPPVTVKLPPGT----PNGRVLRVRGKGAVRKDG 341

Query: 295 MRGKLYIHFTVDFPESLSPDQCKMLE 320
            RG L +   V  P+ LS    + LE
Sbjct: 342 TRGDLLVTVEVAVPKDLSGKAREALE 367

Length = 389

>gnl|CDD|237659 PRK14287, PRK14287, chaperone protein DnaJ; Provisional

 Score =  117 bits (294), Expect = 1e-29
 Identities = 76/240 (31%), Positives = 124/240 (51%), Gaps = 10/240 (4%)

Query: 27  LSDPEKREIYDQYGEDALKEGMGGGG-GAHDPF-DIFQSFFGGSPFGGGSSRGRRQRRGE 84
           LSDP+K+  YDQ+G     +G GGGG G    F DIF  FFGG   GGG       R+G 
Sbjct: 56  LSDPQKKAHYDQFGHTDPNQGFGGGGAGDFGGFSDIFDMFFGG---GGGRRNPNAPRQGA 112

Query: 85  DVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMK-CSGCQGSGMKVSIRH 143
           D+ + + +  ++   G   ++ + R   C  C G G+K G   + CS C GSG ++++  
Sbjct: 113 DLQYTMTLEFKEAVFGKETEIEIPREETCGTCHGSGAKPGTKPETCSHCGGSG-QLNVEQ 171

Query: 144 LGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITF 203
             P      +  C+ C+GTG+ I  K +C  C G+  ++++K + V V  G+ +GQ++  
Sbjct: 172 NTPFGRVVNRRVCHHCEGTGKII--KQKCATCGGKGKVRKRKKINVKVPAGIDHGQQLRV 229

Query: 204 PGEADEAPD-TVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGR 262
            G+ +   +    GD+  V   K H  F+R GDD++ E  L+  +   G +  +  L+G+
Sbjct: 230 SGQGEAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTLNGK 289

Length = 371

>gnl|CDD|237655 PRK14279, PRK14279, chaperone protein DnaJ; Provisional

 Score =  117 bits (295), Expect = 1e-29
 Identities = 82/273 (30%), Positives = 115/273 (42%), Gaps = 37/273 (13%)

Query: 20  VSKKRFVLSDPEKREIYDQY-----------GEDALKEGMGGGGGAHDP--FDIFQSFFG 66
           VS+   VLSDP KR+ YD+                   G GG G   D   F++   F  
Sbjct: 55  VSEAHDVLSDPAKRKEYDETRRLFAGGGFGGRRFDGGGGFGGFGTGGDGAEFNLNDLFDA 114

Query: 67  GSPFGGG---------------SSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNV 111
               GGG               S+R  R RRG D+     +   +   G +  L L+   
Sbjct: 115 AGRGGGGGIGDLFGGLFNRGGGSARPSRPRRGNDLETETTLDFVEAAKGVTMPLRLTSPA 174

Query: 112 ICTKCKGKGSKSGASMK-CSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKD 170
            CT C G G++ G S K C  C GSG  V  R+ G     +   PC +C+GTG  I D  
Sbjct: 175 PCTTCHGSGARPGTSPKVCPTCNGSG--VISRNQGAFGFSE---PCTDCRGTGSIIEDP- 228

Query: 171 RCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPD-TVTGDIVFVLQQKEHPK 229
            C +CKG  V    + + V +  G+++GQ+I   G+ +       +GD+   +  +    
Sbjct: 229 -CEECKGTGVTTRTRTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKV 287

Query: 230 FKRKGDDLFVEHTLSLTEALCGFQFVITHLDGR 262
           F R GDDL V   +S TE   G    +  LDG 
Sbjct: 288 FGRDGDDLTVTVPVSFTELALGSTLSVPTLDGP 320

Length = 392

>gnl|CDD|172776 PRK14288, PRK14288, chaperone protein DnaJ; Provisional

 Score =  112 bits (280), Expect = 1e-27
 Identities = 85/299 (28%), Positives = 143/299 (47%), Gaps = 13/299 (4%)

Query: 26  VLSDPEKREIYDQYGEDALKEGMGGGGGAHDPFDIFQSFFGGSPFGGGSSRGRRQRR--G 83
           VLSD +KR +YD+YG+  L +         D F+   SFF  + FG G+   +RQ+    
Sbjct: 55  VLSDEKKRALYDRYGKKGLNQAGASQSDFSDFFEDLGSFFEDA-FGFGARGSKRQKSSIA 113

Query: 84  EDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRH 143
            D +  +++S ++   G  K + +    +C  C G G+K  A   C  C G G +V +R 
Sbjct: 114 PDYLQTIELSFKEAVFGCKKTIKVQYQSVCESCDGTGAKDKALETCKQCNGQG-QVFMRQ 172

Query: 144 LGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITF 203
              S  Q     C  C+G G+ I  K  C  CKG+  I + + ++ I+ +G+ +  ++  
Sbjct: 173 GFMSFAQT----CGACQGKGKII--KTPCQACKGKTYILKDEEIDAIIPEGIDDQNRMVL 226

Query: 204 PGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQ 263
             + +E      GD+    + KE   FKR+G DLF+E  +  T    G    +  L G +
Sbjct: 227 KNKGNEYEKGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKGDE 286

Query: 264 LLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETV 322
           L +K       +  Q  A  +EG+   +  + RG L +   V +P+SL+ +Q ++LE +
Sbjct: 287 LELKIPRN--ARDRQTFAFRNEGVKHPESSY-RGSLIVELQVIYPKSLNKEQQELLEKL 342

Length = 369

>gnl|CDD|216569 pfam01556, DnaJ_C, DnaJ C terminal domain

 Score = 92.2 bits (230), Expect = 2e-23
 Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 2/83 (2%)

Query: 236 DLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFM 295
           DL+V   +SL EAL G    +  LDGR++ IK   G   +P     I  +GMP+ +    
Sbjct: 1   DLYVTLPISLKEALLGGTVEVPTLDGRKVKIKIPAG--TQPGDKLRIKGKGMPINKGGNG 58

Query: 296 RGKLYIHFTVDFPESLSPDQCKM 318
           RG L +   V  P+ LS +Q ++
Sbjct: 59  RGDLIVTLNVKIPKKLSSEQKEL 81

This family consists of the C terminal region form the DnaJ protein. Although the function of this region is unknown, it is always found associated with pfam00226 and pfam00684. DnaJ is a chaperone associated with the Hsp70 heat-shock system involved in protein folding and renaturation after stress. Length = 81

>gnl|CDD|216058 pfam00684, DnaJ_CXXCXGXG, DnaJ central domain

 Score = 79.7 bits (197), Expect = 6e-19
 Identities = 29/68 (42%), Positives = 35/68 (51%), Gaps = 4/68 (5%)

Query: 113 CTKCKGKGSKSGASMK-CSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDR 171
           C  C G G+K G   K C  C GSG  V  +   P  + QMQ  C +C GTG+ I  KD 
Sbjct: 1   CPHCHGTGAKPGKKPKTCPQCNGSGQVVKRQR-TPGGVFQMQQTCPKCGGTGKII--KDP 57

Query: 172 CPQCKGEK 179
           C  CKG+ 
Sbjct: 58  CKVCKGKG 65

The central cysteine-rich (CR) domain of DnaJ proteins contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DNAJ cysteine rich domain and various hydrophobic peptides has been found. Length = 65

>gnl|CDD|199908 cd10719, DnaJ_zf, Zinc finger domain of DnaJ and HSP40

 Score = 75.8 bits (187), Expect = 2e-17
 Identities = 27/68 (39%), Positives = 33/68 (48%), Gaps = 4/68 (5%)

Query: 113 CTKCKGKGSKSGASM-KCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDR 171
           C  C G G+K G     C  C GSG    ++  G     Q Q  C  C GTG+ I  KD 
Sbjct: 1   CPTCNGSGAKPGTKPKTCPTCGGSGQVRQVQGTGF-GFFQTQTTCPTCGGTGKII--KDP 57

Query: 172 CPQCKGEK 179
           CP+CKG+ 
Sbjct: 58  CPKCKGKG 65

Central/middle or CxxCxGxG-motif containing domain of DnaJ/Hsp40 (heat shock protein 40). DnaJ proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonin family. Hsp40 proteins are characterized by the presence of an N-terminal J domain, which mediates the interaction with Hsp70. This central domain contains four repeats of a CxxCxGxG motif and binds to two Zinc ions. It has been implicated in substrate binding. Length = 65

>gnl|CDD|237667 PRK14299, PRK14299, chaperone protein DnaJ; Provisional

 Score = 60.7 bits (147), Expect = 2e-10
 Identities = 43/128 (33%), Positives = 59/128 (46%), Gaps = 18/128 (14%)

Query: 26  VLSDPEKREIYDQYGEDALKEGM------GGGGGAHDPFDI------FQSFFGGSPFGGG 73
           VLSDPEKR IYD YG  A   G         GGG    F++      FQ  FGG    GG
Sbjct: 55  VLSDPEKRRIYDTYGTTAASAGWQGPPPGPPGGGDFSGFNVGDFSDFFQQLFGGRGGFGG 114

Query: 74  -----SSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMK 128
                 S GRR R+G D+   L ++LE+ Y G  K + ++   +  +    G + G  ++
Sbjct: 115 FGDLFGSVGRRARKGRDLEAELPLTLEEAYRGGEKVVEVAGERLSVRIP-PGVREGQVIR 173

Query: 129 CSGCQGSG 136
            +G    G
Sbjct: 174 LAGKGRQG 181

Length = 291

>gnl|CDD|237667 PRK14299, PRK14299, chaperone protein DnaJ; Provisional

 Score = 48.8 bits (116), Expect = 2e-06
 Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 21/145 (14%)

Query: 177 GEKVIQ-EKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGD 235
           GEKV++   + L V +  G++ GQ I   G+  +      GD+  V++   HP F+ +GD
Sbjct: 147 GEKVVEVAGERLSVRIPPGVREGQVIRLAGKGRQG-----GDLYLVVRLLPHPVFRLEGD 201

Query: 236 DLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKA-----INDEGMPMY 290
           DL+    +    A+ G +  +  LDG        P EV  P + +A     +  +G P  
Sbjct: 202 DLYATVDVPAPIAVVGGKVRVMTLDG--------PVEVTIPPRTQAGRKLRLKGKGWP-- 251

Query: 291 QRPFMRGKLYIHFTVDFPESLSPDQ 315
           + P  RG  Y    +  P   +P++
Sbjct: 252 RGPAGRGDQYAEVRITIPTRPTPEE 276

Length = 291

>gnl|CDD|182347 PRK10266, PRK10266, curved DNA-binding protein CbpA; Provisional

 Score = 44.8 bits (106), Expect = 3e-05
 Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 11/95 (11%)

Query: 26  VLSDPEKREIYDQYGE--------DALKEGMGGGGGAHDPFDIFQSFFGGSPFGGGSSRG 77
           VLSD ++R  YDQ  +           + G G    A D  DIF S FG        SR 
Sbjct: 55  VLSDEQRRAEYDQLWQHRNDPQFNRQFQHGDGQSFNAEDFDDIFSSIFGQH---ARQSRQ 111

Query: 78  RRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVI 112
           R   RG D+   + V LE+      + +S +  V 
Sbjct: 112 RPAARGHDIEIEVAVFLEETLTEHKRTISYNLPVY 146

Length = 306

>gnl|CDD|199909 cd10747, DnaJ_C, C-terminal substrate binding domain of DnaJ and HSP40

 Score = 42.0 bits (100), Expect = 9e-05
 Identities = 9/32 (28%), Positives = 19/32 (59%)

Query: 84  EDVIHPLKVSLEDLYNGTSKKLSLSRNVICTK 115
            D+ + L+++LE+ Y G  K++ + R V   +
Sbjct: 1   ADLRYDLELTLEEAYFGKEKEIKIPRKVTRVR 32

The C-terminal region of the DnaJ/Hsp40 protein mediates oligomerization and binding to denatured polypeptide substrate. DnaJ/Hsp40 is a widely conserved heat-shock protein. It prevents the aggregation of unfolded substrate and forms a ternary complex with both substrate and DnaK/Hsp70; the N-terminal J-domain of DnaJ/Hsp40 stimulates the ATPase activity of DnaK/Hsp70. Length = 158

>gnl|CDD|234368 TIGR03835, termin_org_DnaJ, terminal organelle assembly protein TopJ

 Score = 41.0 bits (95), Expect = 0.001
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 4/40 (10%)

Query: 26 VLSDPEKREIYDQYGEDALKEGMGGGGGAHDPFDIFQSFF 65
          VLS+P+KR  YD+YG D +              D+F SFF
Sbjct: 53 VLSNPKKRANYDKYGHDGVD---REDDFDFQA-DVFNSFF 88

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility [Cellular processes, Chemotaxis and motility]. Length = 871

>gnl|CDD|225124 COG2214, CbpA, DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]

 Score = 39.4 bits (91), Expect = 0.002
 Identities = 47/245 (19%), Positives = 74/245 (30%), Gaps = 21/245 (8%)

Query: 9   SDNTKYYEILGVSKKRFVLSDPEKREIYD----QYGEDALKEGMGGGGGAHDPFDIFQSF 64
           SD   YYEILGV       S  E ++ Y     +Y  D      G    A + F      
Sbjct: 3   SDLLDYYEILGVPPNA---SLEEIKKAYRKLALKYHPDRNP---GDPKVAEEKFKEINEA 56

Query: 65  FGGSPFGGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSG 124
           +          R    + G D   P K   E         L L+      + K   ++  
Sbjct: 57  Y--EILSDPERRAEYDKIGADNYFPGKSYRESAAFPIEGSLQLTGLYEEWRGKRNKTERK 114

Query: 125 ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQC-KGEKV--- 180
           AS+     +G     +   L       ++      +     + D     +   G K    
Sbjct: 115 ASLADLLSRGLSGLAAALSLFADE-AALRSGSLRRRDLAANLAD--NFEEALAGVKKAVA 171

Query: 181 IQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVE 240
               K L+  ++ G   G+ +   G   ++     G        K HP F  +GDD    
Sbjct: 172 RLLGKALKSTIKAGALEGKALRLKGL-LKSARGALGKARLKELSKRHPPFALEGDDK-YP 229

Query: 241 HTLSL 245
             L +
Sbjct: 230 VKLRI 234

Length = 237

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	382
PTZ00037	421	DnaJ_C chaperone protein; Provisional	100.0
COG0484	371	DnaJ DnaJ-class molecular chaperone with C-termina	100.0
PRK14296	372	chaperone protein DnaJ; Provisional	100.0
PRK14288	369	chaperone protein DnaJ; Provisional	100.0
PRK14298	377	chaperone protein DnaJ; Provisional	100.0
KOG0712	337	consensus Molecular chaperone (DnaJ superfamily) [	100.0
PRK14276	380	chaperone protein DnaJ; Provisional	100.0
PRK14277	386	chaperone protein DnaJ; Provisional	100.0
PRK14280	376	chaperone protein DnaJ; Provisional	100.0
PRK14286	372	chaperone protein DnaJ; Provisional	100.0
PRK14287	371	chaperone protein DnaJ; Provisional	100.0
PRK14278	378	chaperone protein DnaJ; Provisional	100.0
PRK14297	380	chaperone protein DnaJ; Provisional	100.0
PRK14282	369	chaperone protein DnaJ; Provisional	100.0
PRK14285	365	chaperone protein DnaJ; Provisional	100.0
PRK14281	397	chaperone protein DnaJ; Provisional	100.0
PRK14279	392	chaperone protein DnaJ; Provisional	100.0
PRK14284	391	chaperone protein DnaJ; Provisional	100.0
TIGR02349	354	DnaJ_bact chaperone protein DnaJ. This model repre	100.0
PRK14301	373	chaperone protein DnaJ; Provisional	100.0
PRK14295	389	chaperone protein DnaJ; Provisional	100.0
PRK14294	366	chaperone protein DnaJ; Provisional	100.0
PRK14290	365	chaperone protein DnaJ; Provisional	100.0
PRK14293	374	chaperone protein DnaJ; Provisional	100.0
PRK10767	371	chaperone protein DnaJ; Provisional	100.0
PRK14300	372	chaperone protein DnaJ; Provisional	100.0
PRK14283	378	chaperone protein DnaJ; Provisional	100.0
PRK14291	382	chaperone protein DnaJ; Provisional	100.0
PRK14289	386	chaperone protein DnaJ; Provisional	100.0
PRK14292	371	chaperone protein DnaJ; Provisional	100.0
PRK14299	291	chaperone protein DnaJ; Provisional	100.0
PRK10266	306	curved DNA-binding protein CbpA; Provisional	100.0
TIGR03835	871	termin_org_DnaJ terminal organelle assembly protei	100.0
KOG0713	336	consensus Molecular chaperone (DnaJ superfamily) [	100.0
KOG0715	288	consensus Molecular chaperone (DnaJ superfamily) [	99.95
PF01556	81	CTDII: DnaJ C terminal domain; InterPro: IPR002939	99.86
COG0484	371	DnaJ DnaJ-class molecular chaperone with C-termina	99.63
KOG0714	306	consensus Molecular chaperone (DnaJ superfamily) [	99.62
PRK10767	371	chaperone protein DnaJ; Provisional	99.6
PF00684	66	DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR0	99.56
PRK14282	369	chaperone protein DnaJ; Provisional	99.45
PRK14300	372	chaperone protein DnaJ; Provisional	99.43
PRK14294	366	chaperone protein DnaJ; Provisional	99.38
PRK14290	365	chaperone protein DnaJ; Provisional	99.38
PRK14298	377	chaperone protein DnaJ; Provisional	99.36
PRK14285	365	chaperone protein DnaJ; Provisional	99.35
PRK14277	386	chaperone protein DnaJ; Provisional	99.33
PRK14279	392	chaperone protein DnaJ; Provisional	99.32
PRK14301	373	chaperone protein DnaJ; Provisional	99.29
PRK14284	391	chaperone protein DnaJ; Provisional	99.29
PRK14278	378	chaperone protein DnaJ; Provisional	99.28
PRK14288	369	chaperone protein DnaJ; Provisional	99.28
TIGR02349	354	DnaJ_bact chaperone protein DnaJ. This model repre	99.26
PRK14295	389	chaperone protein DnaJ; Provisional	99.26
PRK14293	374	chaperone protein DnaJ; Provisional	99.24
PRK14286	372	chaperone protein DnaJ; Provisional	99.23
PRK14292	371	chaperone protein DnaJ; Provisional	99.23
PRK14287	371	chaperone protein DnaJ; Provisional	99.23
PRK14280	376	chaperone protein DnaJ; Provisional	99.21
PRK14281	397	chaperone protein DnaJ; Provisional	99.21
PRK14276	380	chaperone protein DnaJ; Provisional	99.19
PRK14297	380	chaperone protein DnaJ; Provisional	99.16
PRK14289	386	chaperone protein DnaJ; Provisional	99.14
PRK14283	378	chaperone protein DnaJ; Provisional	99.13
PTZ00037	421	DnaJ_C chaperone protein; Provisional	99.12
PRK14296	372	chaperone protein DnaJ; Provisional	99.12
PRK14291	382	chaperone protein DnaJ; Provisional	99.11
PRK14299	291	chaperone protein DnaJ; Provisional	98.88
PLN03165	111	chaperone protein dnaJ-related; Provisional	98.85
PRK10266	306	curved DNA-binding protein CbpA; Provisional	98.68
PTZ00341	1136	Ring-infected erythrocyte surface antigen; Provisi	98.63
PF01556	81	CTDII: DnaJ C terminal domain; InterPro: IPR002939	98.41
KOG0718	546	consensus Molecular chaperone (DnaJ superfamily) [	98.4
KOG0624	504	consensus dsRNA-activated protein kinase inhibitor	98.37
KOG0712	337	consensus Molecular chaperone (DnaJ superfamily) [	98.35
KOG0691	296	consensus Molecular chaperone (DnaJ superfamily) [	98.34
TIGR02642	186	phage_xxxx uncharacterized phage protein. This unc	98.32
COG2214	237	CbpA DnaJ-class molecular chaperone [Posttranslati	98.22
KOG0716	279	consensus Molecular chaperone (DnaJ superfamily) [	98.1
KOG0550	486	consensus Molecular chaperone (DnaJ superfamily) [	97.8
COG1107	715	Archaea-specific RecJ-like exonuclease, contains D	97.79
PF00684	66	DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR0	97.72
KOG0719	264	consensus Molecular chaperone (DnaJ superfamily) [	97.72
KOG2813	406	consensus Predicted molecular chaperone, contains	97.58
KOG0717	508	consensus Molecular chaperone (DnaJ superfamily) [	97.47
PHA03102	153	Small T antigen; Reviewed	97.45
PF00226	64	DnaJ: DnaJ domain; InterPro: IPR001623 The prokary	97.43
TIGR03835	871	termin_org_DnaJ terminal organelle assembly protei	97.42
COG1107	715	Archaea-specific RecJ-like exonuclease, contains D	97.0
PLN03165	111	chaperone protein dnaJ-related; Provisional	96.65
PRK01356	166	hscB co-chaperone HscB; Provisional	96.32
PRK05014	171	hscB co-chaperone HscB; Provisional	96.3
KOG2813	406	consensus Predicted molecular chaperone, contains	95.98
PRK03578	176	hscB co-chaperone HscB; Provisional	95.91
PRK00294	173	hscB co-chaperone HscB; Provisional	95.76
TIGR02642	186	phage_xxxx uncharacterized phage protein. This unc	95.75
KOG0720	490	consensus Molecular chaperone (DnaJ superfamily) [	95.53
smart00271	60	DnaJ DnaJ molecular chaperone homology domain.	94.44
KOG0721	230	consensus Molecular chaperone (DnaJ superfamily) [	93.58
PRK01773	173	hscB co-chaperone HscB; Provisional	93.47
cd06257	55	DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat sho	91.6
COG5269	379	ZUO1 Ribosome-associated chaperone zuotin [Transla	91.21
KOG0722	329	consensus Molecular chaperone (DnaJ superfamily) [	87.94
cd03031	147	GRX_GRX_like Glutaredoxin (GRX) family, GRX-like d	87.81
COG5407	610	SEC63 Preprotein translocase subunit Sec63 [Intrac	84.96
KOG0715	288	consensus Molecular chaperone (DnaJ superfamily) [	83.27
TIGR00630	924	uvra excinuclease ABC, A subunit. This family is b	82.62
KOG2824	281	consensus Glutaredoxin-related protein [Posttransl	82.54
PHA02624	647	large T antigen; Provisional	80.37

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=100.00  E-value=1.1e-88  Score=682.93  Aligned_cols=364  Identities=45%  Similarity=0.874  Sum_probs=324.1

Q ss_pred             CCCCCCCCcchhhhcCCCCC---------------------------------ce-eccCccccccccccchhhhhCCCC
Q 016833            4 RAPKKSDNTKYYEILGVSKK---------------------------------RF-VLSDPEKREIYDQYGEDALKEGMG   49 (382)
Q Consensus         4 ~~~~~~~~~~~Y~iLgv~~~---------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g~~   49 (382)
                      |+++.|..+|||+||||+++                                 || |||||+||++||+||++++.++. 
T Consensus        20 ~~~~~~~~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~~e~F~~i~~AYevLsD~~kR~~YD~~G~~~~~~~~-   98 (421)
T PTZ00037         20 RRKREVDNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGDPEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEGGE-   98 (421)
T ss_pred             cccccccchhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCchHHHHHHHHHHHHHhccHHHHHHHhhhcchhcccCC-
Confidence            56677778999999999999                                 99 99999999999999998876421 


Q ss_pred             CCCCCCCchhhhhcccCCCCCCCCCCCCccccCCceeEeccccccccccCcceeEEeeceeeeCCCCCCCCccCCCcccC
Q 016833           50 GGGGAHDPFDIFQSFFGGSPFGGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKC  129 (382)
Q Consensus        50 ~~~~~~~~~d~F~~~Fggg~f~g~~~~~~~~~kg~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C  129 (382)
                         ++.+++|+|+.|||++    +  +..+++++.|+.+.|.|||+|+|+|+++++.+++.+.|+.|+|+|...+...+|
T Consensus        99 ---~~~d~~d~f~~~Fggg----~--~~~~~~rg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C  169 (421)
T PTZ00037         99 ---QPADASDLFDLIFGGG----R--KPGGKKRGEDIVSHLKVTLEQIYNGAMRKLAINKDVICANCEGHGGPKDAFVDC  169 (421)
T ss_pred             ---CCcchhhhHHHhhccc----c--ccccccCCCCEEEEeeeeHHHHhCCCceEEEeeccccccccCCCCCCCCCCccC
Confidence               1246789999999742    1  112346799999999999999999999999999999999999999877766899


Q ss_pred             CCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCCCceEEEeceEEEEEeccCCCCCCEEEeCCCCCC
Q 016833          130 SGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADE  209 (382)
Q Consensus       130 ~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G~~~g~~i~~~geG~~  209 (382)
                      +.|+|+|+++.++++|| |++|++.+|+.|+|+|+++..+++|+.|+|.+++.+.++|+|+|||||.+|++|+|+|+|++
T Consensus       170 ~~C~G~G~~~~~~~~g~-~~~q~~~~C~~C~G~G~~i~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~dG~~I~~~G~Gd~  248 (421)
T PTZ00037        170 KLCNGQGIRVQIRQMGS-MIHQTQSTCNSCNGQGKIIPESKKCKNCSGKGVKKTRKILEVNIDKGVPNQHKITFHGEADE  248 (421)
T ss_pred             CCCCCCCeEEEEEeecc-eeeEEEEeCCCCCCcceeccccccCCcCCCcceeeeeeEEEEeeCCCCCCCcEEEEecccCC
Confidence            99999999999999999 99999999999999999999889999999999999999999999999999999999999999


Q ss_pred             CCCCCCccEEEEEEEecCCccccccccceeeeccCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEEEEcCCCCCC
Q 016833          210 APDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPM  289 (382)
Q Consensus       210 ~~g~~~GDl~v~i~~k~h~~F~R~g~DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~i~g~GmP~  289 (382)
                      .+++.||||||+|++++|+.|+|+|+||+++++|||+|||+|+++.|+||||+.|.|++|||++++||++++|+|+|||.
T Consensus       249 ~~~~~pGDLiv~I~~~ph~~F~R~G~DL~~~~~Isl~eAllG~~i~I~tLdG~~l~I~ip~g~vt~pg~~~~I~geGmP~  328 (421)
T PTZ00037        249 KPNEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRKLLVNTPPGEVVKPGDIKVINNEGMPT  328 (421)
T ss_pred             CCCCCCCcEEEEEEecCCCCcEEeCCeEEEEEeCCHHHHhcCCEEEeeCCCCCeEEEEeCCCcccCCCcEEEeCCCCccc
Confidence            88899999999999999999999999999999999999999999999999999899999999999999999999999998


Q ss_pred             CCCCCCCCcEEEEEEEECC--CCCCHHHHHHHHHhCCCCCCCCCccCcccccceeeeecCChhHHHHHHhhhhccccccC
Q 016833          290 YQRPFMRGKLYIHFTVDFP--ESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRKQQAAQEAYDED  367 (382)
Q Consensus       290 ~~~~~~~GdL~i~~~V~~P--~~l~~~~~~~l~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (382)
                      .++++.+|||||+|+|.||  +.||++|+++|++|||.++.... +++++++|+++++++|+++...+   .++++|+||
T Consensus       329 ~~~~~~rGDL~V~~~V~~P~~~~Ls~~qk~ll~~l~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~---~~~~~~~~~  404 (421)
T PTZ00037        329 YKSPFKKGNLYVTFEVIFPVDRKFTNEEKEILKSLFPQNPEEKK-DLEDTEIEVVTAQNVDPEEVKDR---DQKQQYQED  404 (421)
T ss_pred             CCCCCCCCCEEEEEEEEcCCCCCCCHHHHHHHHHhccCCCCCCC-CCCcccceeEecccCCHHHhhhh---HHHHhhccc
Confidence            7655679999999999999  88999999999999997654443 56678899999999999775444   235566555


Q ss_pred             CCC--CCCCCCCCCcCC
Q 016833          368 DDM--QGGAQRVQCAQQ  382 (382)
Q Consensus       368 ~~~--~~~~~~~~C~~q  382 (382)
                      +|+  +|++++||||||
T Consensus       405 ~~~~~~~~~~~v~c~~q  421 (421)
T PTZ00037        405 EDDEHHQEGERVACRQQ  421 (421)
T ss_pred             cccccCCCCCccccCCC
Confidence            433  356789999998

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=1.2e-80  Score=604.79  Aligned_cols=307  Identities=38%  Similarity=0.722  Sum_probs=276.2

Q ss_pred             CCCcchhhhcCCCCC-------------------------------------ce-eccCccccccccccchhhhhCC-CC
Q 016833            9 SDNTKYYEILGVSKK-------------------------------------RF-VLSDPEKREIYDQYGEDALKEG-MG   49 (382)
Q Consensus         9 ~~~~~~Y~iLgv~~~-------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g-~~   49 (382)
                      ++.+|||+||||+++                                     || |||||+||++||+||+++++++ ++
T Consensus         1 ~~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~~gg~g   80 (371)
T COG0484           1 MAKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFKAGGFG   80 (371)
T ss_pred             CCccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccccCCcC
Confidence            457899999999999                                     99 9999999999999999998632 22


Q ss_pred             C-CCC-CC-CchhhhhcccCCCCCCCCCCCCccccCCceeEeccccccccccCcceeEEeeceeeeCCCCCCCCccCCC-
Q 016833           50 G-GGG-AH-DPFDIFQSFFGGSPFGGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGA-  125 (382)
Q Consensus        50 ~-~~~-~~-~~~d~F~~~Fggg~f~g~~~~~~~~~kg~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~-  125 (382)
                      + +++ +. ++.|||++||||+++  +++++++++++.|+.+.|+|||+|+|+|++++|.+++.+.|+.|+|+|++.++ 
T Consensus        81 g~g~~~fgg~~~DIF~~~FgGg~~--~~~~~~~~~rG~Dl~~~l~isleEa~~G~~~~i~~~~~~~C~~C~GsGak~gt~  158 (371)
T COG0484          81 GFGFGGFGGDFGDIFEDFFGGGGG--GRRRPNRPRRGADLRYNLEITLEEAVFGVKKEIRVTRSVTCSTCHGSGAKPGTD  158 (371)
T ss_pred             CCCcCCCCCCHHHHHHHhhcCCCc--ccCCCCCcccCCceEEEEEeEhhhhccCceeeEecceeeECCcCCCCCCCCCCC
Confidence            2 111 22 689999999974322  22334557899999999999999999999999999999999999999999996 


Q ss_pred             cccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCCCceEEEeceEEEEEeccCCCCCCEEEeCC
Q 016833          126 SMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG  205 (382)
Q Consensus       126 ~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G~~~g~~i~~~g  205 (382)
                      ..+|++|+|+|.+...+++   ++++++++|+.|+|+|+++.  ++|+.|+|.|++.+.++|+|+||+|+.+|++|+++|
T Consensus       159 ~~tC~tC~G~G~v~~~~~~---g~~~~~~~C~~C~G~G~~i~--~pC~~C~G~G~v~~~~~i~V~IPaGv~~g~~ir~~g  233 (371)
T COG0484         159 PKTCPTCNGSGQVRTVQRT---GFFSFQQTCPTCNGTGKIIK--DPCGKCKGKGRVKKKKSISVNIPAGVDDGDRIRLSG  233 (371)
T ss_pred             CCcCCCCCCcCeEEEEEee---eEEEEEEECCCCccceeECC--CCCCCCCCCCeEeeeeEEEEECCCCCccCCEEEEec
Confidence            4899999999999888887   45678999999999999995  999999999999999999999999999999999999


Q ss_pred             CCCCCC-CCCCccEEEEEEEecCCccccccccceeeeccCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEEEEcC
Q 016833          206 EADEAP-DTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAIND  284 (382)
Q Consensus       206 eG~~~~-g~~~GDl~v~i~~k~h~~F~R~g~DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~i~g  284 (382)
                      +|++.+ ++++|||||+|.+++|+.|+|+|+|||++++|++.+|++|+++.|+||||+ +.|+||||  +++|++++|+|
T Consensus       234 ~G~~g~~Ggp~GDLyv~i~v~~h~~F~R~g~dL~~~~~Is~~~AalG~~i~vptl~g~-~~l~ip~G--tq~G~~~rl~g  310 (371)
T COG0484         234 EGEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTEAALGGEIEVPTLDGR-VKLKIPAG--TQTGEVFRLRG  310 (371)
T ss_pred             CcccCCCCCCCccEEEEEEeecCCCeEECCCceEeccccCHHHHhcCCEEEEEecCCC-EEEecCCC--CccCcEEEEcC
Confidence            999976 778899999999999999999999999999999999999999999999999 99999999  58899999999


Q ss_pred             CCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHhCCCC
Q 016833          285 EGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPR  326 (382)
Q Consensus       285 ~GmP~~~~~~~~GdL~i~~~V~~P~~l~~~~~~~l~~~lp~~  326 (382)
                      +|||..+ ...+|||||+++|++|++|+.+|+++|++|....
T Consensus       311 kG~p~~~-~~~~GDl~v~v~v~~P~~ls~~q~~lL~~~~~~~  351 (371)
T COG0484         311 KGMPKLR-SGGRGDLYVRVKVETPKNLSDEQKELLEEFAKSL  351 (371)
T ss_pred             CCccccC-CCCcCCEEEEEEEEcCCCCCHHHHHHHHHHHHhh
Confidence            9999863 4567999999999999999999999999998744

>PRK14296 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.7e-74  Score=574.36  Aligned_cols=304  Identities=29%  Similarity=0.559  Sum_probs=271.1

Q ss_pred             CcchhhhcCCCCC------------------------------------ce-eccCccccccccccchhhhhCCC--CCC
Q 016833           11 NTKYYEILGVSKK------------------------------------RF-VLSDPEKREIYDQYGEDALKEGM--GGG   51 (382)
Q Consensus        11 ~~~~Y~iLgv~~~------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g~--~~~   51 (382)
                      .+|||+||||+++                                    || |||||+||++||+||+++++++.  +++
T Consensus         3 ~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~~~~~~~~~~~~   82 (372)
T PRK14296          3 KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAFDGSSGFSSN   82 (372)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHhcCHHHhhhhhhccchhhcCCCCcCcC
Confidence            5799999999998                                    99 99999999999999998876321  111


Q ss_pred             -C------------CCCCchhhhhcccCCCCCCCCCCCCccccCCceeEeccccccccccCcceeEEeeceeeeCCCCCC
Q 016833           52 -G------------GAHDPFDIFQSFFGGSPFGGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKG  118 (382)
Q Consensus        52 -~------------~~~~~~d~F~~~Fggg~f~g~~~~~~~~~kg~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G  118 (382)
                       +            ++.++.|+|++|||++    + .+.++++++.|+.+.|.|||+|+|+|+++++.+.+.+.|+.|+|
T Consensus        83 ~~~~~~~~~~~~~~g~~~f~d~f~~~fggg----~-~~~~~~~~g~di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~G  157 (372)
T PRK14296         83 FGDFEDLFSNMGSSGFSSFTNIFSDFFGSN----K-SDYQRSTKGQSVSLDIYLTFKELLFGVDKIIELDLLTNCSKCFG  157 (372)
T ss_pred             CCccccccccccccccccchhhhhhhcCCC----c-cCCCCcCCCCCeEEEeeccHHHhhCCeeEEEEEeeeeccCCCCC
Confidence             0            1123558888888742    1 11233567999999999999999999999999999999999999


Q ss_pred             CCccCCCc-ccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCCCceEEEeceEEEEEeccCCCC
Q 016833          119 KGSKSGAS-MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQN  197 (382)
Q Consensus       119 ~G~~~~~~-~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G~~~  197 (382)
                      +|.+.+.. .+|+.|+|+|+++..+++|| |++|++.+|+.|.|+|+++.  +.|+.|+|.+++.+.++++|.||||+++
T Consensus       158 ~G~~~~~~~~~C~~C~G~G~~~~~~~~g~-~~~q~~~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~~~V~Ip~G~~~  234 (372)
T PRK14296        158 SGAESNSDIHICNNCHGTGEVLVQKNMGF-FQFQQSAKCNVCNGAGKIIK--NKCKNCKGKGKYLERKKIEVNIPKGIRP  234 (372)
T ss_pred             CccCCCCCCccCCCCCCCceEEEEEeccc-eEEEEEecCCCcCCcceeec--ccccCCCCceEEEEEEEEEEEECCCCCC
Confidence            99988764 78999999999999999999 66688999999999999986  8899999999999999999999999999


Q ss_pred             CCEEEeCCCCCCC-CCCCCccEEEEEEEecCCccccc-cccceeeeccCHHHHhCCCEEEEEecCCcEEEEEeCCCcccc
Q 016833          198 GQKITFPGEADEA-PDTVTGDIVFVLQQKEHPKFKRK-GDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVK  275 (382)
Q Consensus       198 g~~i~~~geG~~~-~g~~~GDl~v~i~~k~h~~F~R~-g~DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~  275 (382)
                      |++|+|+|+|++. +++.+|||||+|++++|+.|+|+ |+||+++++|||+|||+|+++.|+||||+ +.|++|++  ++
T Consensus       235 G~~i~~~g~G~~~~~~~~~GDL~v~v~v~~h~~F~R~~G~DL~~~~~Isl~eAllG~~~~i~tldG~-~~v~ip~~--t~  311 (372)
T PRK14296        235 NQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMTYNISYLDAILGNEIIIKTLDGD-IKYKLPKS--IN  311 (372)
T ss_pred             CCEEEEeccccCCCCCCCCccEEEEEEEeCCCCEEEeCCCcEEEEEecCHHHHhCCCEEEeeCCCCC-EEEEECCc--cC
Confidence            9999999999986 57789999999999999999995 89999999999999999999999999998 89999987  79


Q ss_pred             CCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHhCCC
Q 016833          276 PDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPP  325 (382)
Q Consensus       276 ~g~~~~i~g~GmP~~~~~~~~GdL~i~~~V~~P~~l~~~~~~~l~~~lp~  325 (382)
                      ||++++|+|+|||...++..+|||||+|+|.||+.||++|+++|++|+..
T Consensus       312 ~g~~~ri~GkGmP~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~~l~~~  361 (372)
T PRK14296        312 SNELIIINNKGLYKSINKDKRGDLIIKVNIVVPKNLSKKEKELIEQIYEQ  361 (372)
T ss_pred             CCcEEEEcCCCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence            99999999999996655567899999999999999999999999999964

>PRK14288 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.2e-72  Score=558.96  Aligned_cols=302  Identities=27%  Similarity=0.542  Sum_probs=263.3

Q ss_pred             CcchhhhcCCCCC-------------------------------------ce-eccCccccccccccchhhhhCCCCCCC
Q 016833           11 NTKYYEILGVSKK-------------------------------------RF-VLSDPEKREIYDQYGEDALKEGMGGGG   52 (382)
Q Consensus        11 ~~~~Y~iLgv~~~-------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g~~~~~   52 (382)
                      .+|||+||||+++                                     || |||||+||++||+||+++++++.++++
T Consensus         2 ~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~~~~~~~~~~~   81 (369)
T PRK14288          2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAGASQS   81 (369)
T ss_pred             CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHHhccHHHHHHHHHhcccccccCCCCcc
Confidence            5899999999999                                     99 999999999999999988763211111


Q ss_pred             CCCC----chhhhhcccCCCCCCCCCCCCccccCCceeEeccccccccccCcceeEEeeceeeeCCCCCCCCccCCCccc
Q 016833           53 GAHD----PFDIFQSFFGGSPFGGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMK  128 (382)
Q Consensus        53 ~~~~----~~d~F~~~Fggg~f~g~~~~~~~~~kg~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~  128 (382)
                      ++.+    +.++|+.|||++   +.+++.++++++.|+.+.|.|||||+|+|+++++.++|.+.|+.|+|+|.......+
T Consensus        82 ~~~~~f~~~~~~F~~~fg~g---~~~~~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~  158 (369)
T PRK14288         82 DFSDFFEDLGSFFEDAFGFG---ARGSKRQKSSIAPDYLQTIELSFKEAVFGCKKTIKVQYQSVCESCDGTGAKDKALET  158 (369)
T ss_pred             ccccchhhHHHHHHhhcCCC---CcccCcCCCCCCCCeeEeccccHHHHhCCeEEEEEEEeeccCCCCCCcccCCCCCcC
Confidence            1222    334666666532   111112234678999999999999999999999999999999999999998876689


Q ss_pred             CCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCCCceEEEeceEEEEEeccCCCCCCEEEeCCCCC
Q 016833          129 CSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEAD  208 (382)
Q Consensus       129 C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G~~~g~~i~~~geG~  208 (382)
                      |+.|+|+|++...+    |++ +++.+|+.|.|+|+++.  +.|+.|+|.+++.+.++++|.||||+++|++|+|+|+|+
T Consensus       159 C~~C~G~G~~~~~~----g~~-~~~~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~l~V~IP~G~~~G~~i~l~g~G~  231 (369)
T PRK14288        159 CKQCNGQGQVFMRQ----GFM-SFAQTCGACQGKGKIIK--TPCQACKGKTYILKDEEIDAIIPEGIDDQNRMVLKNKGN  231 (369)
T ss_pred             CCCCCCCcEEEEEe----ceE-EEEEecCCCCCCceEcc--ccCccCCCcceEEEEEEEEEecCCCCCCCCEEEEccCcc
Confidence            99999999876543    455 45679999999999986  889999999999999999999999999999999999999


Q ss_pred             CCCCCCCccEEEEEEEecCCccccccccceeeeccCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEEEEcCCCCC
Q 016833          209 EAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMP  288 (382)
Q Consensus       209 ~~~g~~~GDl~v~i~~k~h~~F~R~g~DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~i~g~GmP  288 (382)
                      +.+++.+|||||+|++++|+.|+|+|+||+++++|||.|||+|+++.|+||||+.+.|++|++  ++||++++|+|+|||
T Consensus       232 ~~~~~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~i~v~tLdG~~l~i~i~~~--~~~g~~~~i~g~G~p  309 (369)
T PRK14288        232 EYEKGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKGDELELKIPRN--ARDRQTFAFRNEGVK  309 (369)
T ss_pred             CCCCCCCCCEEEEEEEEECCCcEEeCCEEEEEEecCHHHHhcCCEEEeecCCCCEEEEEeCCC--CCCCcEEEEcCCCCC
Confidence            988889999999999999999999999999999999999999999999999999889999997  799999999999999


Q ss_pred             CCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHhCCC
Q 016833          289 MYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPP  325 (382)
Q Consensus       289 ~~~~~~~~GdL~i~~~V~~P~~l~~~~~~~l~~~lp~  325 (382)
                      ..+ +..+|||||+|+|.||++|+++|+++|++|++.
T Consensus       310 ~~~-~~~~GDL~v~~~v~~P~~ls~~q~~~l~~~~~~  345 (369)
T PRK14288        310 HPE-SSYRGSLIVELQVIYPKSLNKEQQELLEKLHAS  345 (369)
T ss_pred             CCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence            764 345899999999999999999999999999974

>PRK14298 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=3.5e-72  Score=558.60  Aligned_cols=307  Identities=31%  Similarity=0.602  Sum_probs=272.2

Q ss_pred             CCCCcchhhhcCCCCC------------------------------------ce-eccCccccccccccchhhhhCCCCC
Q 016833            8 KSDNTKYYEILGVSKK------------------------------------RF-VLSDPEKREIYDQYGEDALKEGMGG   50 (382)
Q Consensus         8 ~~~~~~~Y~iLgv~~~------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g~~~   50 (382)
                      |...+|||+||||+++                                    || |||||+||++||+||++++++++++
T Consensus         1 ~~~~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~~   80 (377)
T PRK14298          1 MATTRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQYSA   80 (377)
T ss_pred             CCCCCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccCChhHHHHHHHHHHHHHHhcchHhhhhhhhcCccccccccCc
Confidence            4556899999999999                                    99 9999999999999999887643111


Q ss_pred             -----CCCCCCchhhhhcccCCCCCCCCCCCCccccCCceeEeccccccccccCcceeEEeeceeeeCCCCCCCCccCCC
Q 016833           51 -----GGGAHDPFDIFQSFFGGSPFGGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGA  125 (382)
Q Consensus        51 -----~~~~~~~~d~F~~~Fggg~f~g~~~~~~~~~kg~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~  125 (382)
                           ++++.++.|+|++|||+++    +++.++++++.|+.+.|.|||||+|+|+++++.+++.+.|+.|+|+|.+.+.
T Consensus        81 ~~~~~~~~~~~~~d~f~~~Fgg~~----~~~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~  156 (377)
T PRK14298         81 EDIFRGADFGGFGDIFEMFFGGGG----RRGRMGPRRGSDLRYDLYITLEEAAFGVRKDIDVPRAERCSTCSGTGAKPGT  156 (377)
T ss_pred             ccccccCCcCcchhhhHhhhcCCC----ccCCCCCCCCCCEEEEEEEEHHHhhCCeEEEEEEEeeccCCCCCCCcccCCC
Confidence                 1122346789999997421    1112335689999999999999999999999999999999999999999877


Q ss_pred             c-ccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCCCceEEEeceEEEEEeccCCCCCCEEEeC
Q 016833          126 S-MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFP  204 (382)
Q Consensus       126 ~-~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G~~~g~~i~~~  204 (382)
                      . .+|+.|+|+|+++..+++ |++++|++.+|+.|+|+|+++.  +.|+.|+|++++.+.++++|.||||+++|++|+|+
T Consensus       157 ~~~~C~~C~G~G~~~~~~~~-~~g~~~~~~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~~~  233 (377)
T PRK14298        157 SPKRCPTCGGTGQVTTTRST-PLGQFVTTTTCSTCHGRGQVIE--SPCPVCSGTGKVRKTRKITVNVPAGADSGLRLKLS  233 (377)
T ss_pred             CCCcCCCCCCccEEEEEEec-CceeEEEEEeCCCCCCCCcccC--CCCCCCCCccEEEEEEEEEecCCCCCCCCCEEEEe
Confidence            5 789999999999988885 4455689999999999999986  88999999999999999999999999999999999


Q ss_pred             CCCCCC-CCCCCccEEEEEEEecCCccccccccceeeeccCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEEEEc
Q 016833          205 GEADEA-PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAIN  283 (382)
Q Consensus       205 geG~~~-~g~~~GDl~v~i~~k~h~~F~R~g~DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~i~  283 (382)
                      |+|++. ++..+|||||+|++++|+.|+|+|+||+++++|+|.|||+|+++.|+||||+ +.|+||++  +++|++++|+
T Consensus       234 g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~-i~v~ip~g--~~~g~~lri~  310 (377)
T PRK14298        234 GEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPTLYGK-VKMNIPPG--TQTHSVFRLK  310 (377)
T ss_pred             cccCCCCCCCCCcCEEEEEEEecCCCeEEEcCcEEEEEEeCHHHHhCCCeEEEecCCCC-EEEEeCCC--cccCCEEEEC
Confidence            999985 5778999999999999999999999999999999999999999999999998 78999998  7999999999


Q ss_pred             CCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHhCCC
Q 016833          284 DEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPP  325 (382)
Q Consensus       284 g~GmP~~~~~~~~GdL~i~~~V~~P~~l~~~~~~~l~~~lp~  325 (382)
                      |+|||..+ ...+|||||+|+|.||+.|+++++++|++++..
T Consensus       311 g~G~p~~~-~~~~GDL~V~~~V~~P~~ls~~~~~ll~~l~~~  351 (377)
T PRK14298        311 DKGMPRLH-GHGKGDQLVKVIVKTPTKLTQEQKELLREFDEL  351 (377)
T ss_pred             CCCCCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence            99999764 346899999999999999999999999999863

>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=3.6e-73  Score=545.48  Aligned_cols=302  Identities=59%  Similarity=1.037  Sum_probs=280.6

Q ss_pred             CCCcchhhhcCCCCC----------------------------------ce-eccCccccccccccchhhhhCCCCCCCC
Q 016833            9 SDNTKYYEILGVSKK----------------------------------RF-VLSDPEKREIYDQYGEDALKEGMGGGGG   53 (382)
Q Consensus         9 ~~~~~~Y~iLgv~~~----------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g~~~~~~   53 (382)
                      +.++.||+||||+++                                  || |||||+||++||+||++++++|+++++ 
T Consensus         1 ~~~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~~~g~~~~g-   79 (337)
T KOG0712|consen    1 VKNTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPDAGEKFKEISQAYEVLSDPEKREIYDQYGEEGLQGGGGGGG-   79 (337)
T ss_pred             CcccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcccCCCCC-
Confidence            468899999999999                                  99 999999999999999999986543322 


Q ss_pred             CCCchhhhhcccCCCCCCCCCCCCccccCCceeEeccccccccccCcceeEEeeceeeeCCCCCCCCccCCCcccCCCCC
Q 016833           54 AHDPFDIFQSFFGGSPFGGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQ  133 (382)
Q Consensus        54 ~~~~~d~F~~~Fggg~f~g~~~~~~~~~kg~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~  133 (382)
                      ++.    |++||+.+   +.+  .+++.+++|++|.|+|||||+|.|.++++.++++.+|+.|+|+|.++++..+|+.|.
T Consensus        80 ~~~----f~~~F~~g---~~~--~~~~~rg~~~~~~~~~~Le~~y~G~s~kl~l~~~~iCs~C~GsGgksg~~~~C~~C~  150 (337)
T KOG0712|consen   80 FGG----FSQFFGFG---GNG--GRGRQRGKDVVHQLKVTLEELYMGKSKKLFLSRNFICSKCSGSGGKSGSAPKCTTCR  150 (337)
T ss_pred             Ccc----HHHhccCC---CcC--ccccccCCCceEEEEEEHHHhhcCCccceecccCccCCcCCCCCCCCCCCCCCCCCC
Confidence            222    88888732   111  122334999999999999999999999999999999999999999999889999999


Q ss_pred             cccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCCCceEEEeceEEEEEeccCCCCCCEEEeCCCCCCCCCC
Q 016833          134 GSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDT  213 (382)
Q Consensus       134 G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G~~~g~~i~~~geG~~~~g~  213 (382)
                      |+|..+.++++||||+|+++..|..|+|+|.++..+++|+.|.|.+++.+.+.++|+|++|++++++|++.|++++.++.
T Consensus       151 GsGv~~~~~~~gPg~~qs~q~~C~~C~G~G~~~~~kd~C~~C~G~~~v~~kkil~v~V~~g~~~~~ki~f~geadea~g~  230 (337)
T KOG0712|consen  151 GSGVQTRTRQMGPGMVQSPQLVCDSCNGSGETISLKDRCKTCSGAKVVREKKILEVHVEPGMPHGQKITFKGEADEAPGT  230 (337)
T ss_pred             CCCceeEEEeccccccccceeEeccCCCccccccccccCcccccchhhhhhheeeccccCCCcccceeeeeeeeeecCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccEEEEEEEecCCccccccccceeeeccCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEEEEcCCCCCCCCCC
Q 016833          214 VTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRP  293 (382)
Q Consensus       214 ~~GDl~v~i~~k~h~~F~R~g~DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~i~g~GmP~~~~~  293 (382)
                      .+||+++.|.+++|+.|.|+++||++..+|+|.|||||+.+.+.||||+.|.|.++||+||+||++++|+|+|||+++++
T Consensus       231 ~pgD~vl~i~~k~h~~F~Rrg~dL~~~~~i~l~eal~G~~~~~~~ldGr~l~~~~~pg~vi~~~~~~~v~~~gmp~~~~~  310 (337)
T KOG0712|consen  231 KPGDVVLLIDQKEHPGFDRRGSDLYRKLTISLVEALCGFQRVWETLDGRLLKLSSKPGEVISPGDTKRVEGEGMPIFRNP  310 (337)
T ss_pred             cCccEEEEecccccccceecccccceeeecchhhccccceEEEEccCCceEEEecCCCceeChhHEEeecCCCcccccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999877


Q ss_pred             CCCCcEEEEEEEECCCCCCHHHHHHHHHhC
Q 016833          294 FMRGKLYIHFTVDFPESLSPDQCKMLETVL  323 (382)
Q Consensus       294 ~~~GdL~i~~~V~~P~~l~~~~~~~l~~~l  323 (382)
                        +|||||+|+|+||+ ++++++.+|+++|
T Consensus       311 --~g~lyi~~~v~fp~-~~~~~~~~l~~~l  337 (337)
T KOG0712|consen  311 --KGDLYIKFEVKFPK-LSPSQLKMLEDLL  337 (337)
T ss_pred             --CCcEEEEEEEEcCC-CChHHHHHHHhhC
Confidence              99999999999999 9999999999886

>PRK14276 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=9.3e-72  Score=556.70  Aligned_cols=305  Identities=30%  Similarity=0.578  Sum_probs=271.7

Q ss_pred             CcchhhhcCCCCC------------------------------------ce-eccCccccccccccchhhhhCCCCC---
Q 016833           11 NTKYYEILGVSKK------------------------------------RF-VLSDPEKREIYDQYGEDALKEGMGG---   50 (382)
Q Consensus        11 ~~~~Y~iLgv~~~------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g~~~---   50 (382)
                      ++|||+||||+++                                    || |||||+||++||+||++++++++++   
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~~~~~~~~~~~   82 (380)
T PRK14276          3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGGGAG   82 (380)
T ss_pred             CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCccccCCCCCCCC
Confidence            5799999999999                                    99 9999999999999999887643211   


Q ss_pred             C-C------CCCCchhhhhcccCCCCCCCCCCCCccccCCceeEeccccccccccCcceeEEeeceeeeCCCCCCCCccC
Q 016833           51 G-G------GAHDPFDIFQSFFGGSPFGGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKS  123 (382)
Q Consensus        51 ~-~------~~~~~~d~F~~~Fggg~f~g~~~~~~~~~kg~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~  123 (382)
                      + +      ++.++.|+|++|||+++   +.+.+.+++++.|+.+.|.|||||+|+|+++++.+.+.+.|+.|+|+|...
T Consensus        83 ~~~~~~~~~~~~~~~d~f~~~fgg~~---~~~~~~~~~~g~di~~~l~vtLee~~~G~~~~i~~~~~~~C~~C~G~G~~~  159 (380)
T PRK14276         83 GFGGFDGSGGFGGFEDIFSSFFGGGG---ARRNPNAPRQGDDLQYRVNLDFEEAIFGKEKEVSYNREATCHTCNGSGAKP  159 (380)
T ss_pred             CCCCccccccccchhhHHHHHhCccc---cccCcCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeccccCCCCcCcccCC
Confidence            1 0      12346789999997421   111123346799999999999999999999999999999999999999988


Q ss_pred             CCc-ccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCCCceEEEeceEEEEEeccCCCCCCEEE
Q 016833          124 GAS-MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKIT  202 (382)
Q Consensus       124 ~~~-~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G~~~g~~i~  202 (382)
                      +.. .+|+.|+|+|.+...++++|||+++ +.+|+.|+|+|+++.  +.|+.|+|.+++.+.++++|.||+|+++|++|+
T Consensus       160 ~~~~~~C~~C~G~G~~~~~~~~~~G~~~~-~~~C~~C~G~G~~~~--~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~  236 (380)
T PRK14276        160 GTSPVTCGKCHGSGVITVDTQTPLGMMRR-QVTCDVCHGTGKEIK--EPCQTCHGTGHEKQAHTVSVKIPAGVETGQQIR  236 (380)
T ss_pred             CCCCccCCCCCCeeEEEEEEecCCceEEE-EEECCCCCCCCcccc--CCCCCCCCceEEEEEEEEEEEeCCCccCCcEEE
Confidence            764 7899999999999999999999986 779999999999986  889999999999999999999999999999999


Q ss_pred             eCCCCCCCC-CCCCccEEEEEEEecCCccccccccceeeeccCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEEE
Q 016833          203 FPGEADEAP-DTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKA  281 (382)
Q Consensus       203 ~~geG~~~~-g~~~GDl~v~i~~k~h~~F~R~g~DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~  281 (382)
                      |+|+|++.+ +..+|||||+|++++|+.|+|+|+||+++++|||.|||+|+++.|+||||+ +.|+||+|  +++|++++
T Consensus       237 l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tldg~-i~v~ip~g--~~~g~~~~  313 (380)
T PRK14276        237 LQGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVPTVHGD-VELKIPAG--TQTGKKFR  313 (380)
T ss_pred             EeccccCCCCCCCCcCEEEEEEEEECcceeeecceEEEEEecCHHHHhCCCeEEEEcCCCc-EEEEECCC--CCCCCEEE
Confidence            999999865 457799999999999999999999999999999999999999999999998 79999998  79999999


Q ss_pred             EcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHhCCC
Q 016833          282 INDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPP  325 (382)
Q Consensus       282 i~g~GmP~~~~~~~~GdL~i~~~V~~P~~l~~~~~~~l~~~lp~  325 (382)
                      |+|+|||..+ ...+|||||+|+|.||+.|+++|+++|++++..
T Consensus       314 i~g~G~p~~~-~~~~GDL~V~~~v~~P~~l~~~q~~~l~~~~~~  356 (380)
T PRK14276        314 LRGKGAPKLR-GGGNGDQHVTVNIVTPTKLNDAQKEALKAFAKA  356 (380)
T ss_pred             ECCCCcCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence            9999999764 335799999999999999999999999999953

>PRK14277 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.2e-71  Score=557.06  Aligned_cols=310  Identities=31%  Similarity=0.620  Sum_probs=272.0

Q ss_pred             CCCCcchhhhcCCCCC-------------------------------------ce-eccCccccccccccchhhhhCC-C
Q 016833            8 KSDNTKYYEILGVSKK-------------------------------------RF-VLSDPEKREIYDQYGEDALKEG-M   48 (382)
Q Consensus         8 ~~~~~~~Y~iLgv~~~-------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g-~   48 (382)
                      |++.+|||+||||+++                                     || |||||+||++||+||+++++.+ .
T Consensus         1 ~~~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~   80 (386)
T PRK14277          1 MAAKKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGF   80 (386)
T ss_pred             CCCCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhCCHHHHHHHHhhcccccccccc
Confidence            5567899999999999                                     99 9999999999999999887532 1


Q ss_pred             CC-----CC---C-----CCCchhhhhcccCCCCCCCCC-CCCccccCCceeEeccccccccccCcceeEEeeceeeeCC
Q 016833           49 GG-----GG---G-----AHDPFDIFQSFFGGSPFGGGS-SRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICT  114 (382)
Q Consensus        49 ~~-----~~---~-----~~~~~d~F~~~Fggg~f~g~~-~~~~~~~kg~di~~~l~vtlee~~~G~~~~i~~~r~~~C~  114 (382)
                      ++     ++   +     +.++.|+|++||++. |++++ ++.++++++.|+.+.|.|||||+|+|+++++.++|.+.|+
T Consensus        81 ~~~~~~~~g~~~~~~~~~~~~~~d~f~~~F~~~-fgg~~~~~~~~~~kg~di~~~l~vtLee~~~G~~~~v~~~r~~~C~  159 (386)
T PRK14277         81 GQGGFGQGGFGGGGFDFDFGGFGDIFEDIFGDF-FGTGRRRAETGPQKGADIRYDLELTFEEAAFGTEKEIEVERFEKCD  159 (386)
T ss_pred             ccCCcCCCCccccCccccccchhHHHHHhhccc-ccCCCcCCCCCCCCCCCEEEEEEEEHHHHhCCeEEEEEEEeeccCC
Confidence            00     00   0     123457888888742 22211 1122346799999999999999999999999999999999


Q ss_pred             CCCCCCccCCCc-ccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCCCceEEEeceEEEEEecc
Q 016833          115 KCKGKGSKSGAS-MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEK  193 (382)
Q Consensus       115 ~C~G~G~~~~~~-~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~  193 (382)
                      .|+|+|...... .+|+.|+|+|+++..++++||++++. .+|+.|+|+|+++.  +.|+.|+|++++.+.+.++|.|||
T Consensus       160 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~-~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~l~V~Ip~  236 (386)
T PRK14277        160 VCKGSGAKPGSKPVTCPVCHGTGQVRTRQNTPFGRIVNI-RTCDRCHGEGKIIT--DPCNKCGGTGRIRRRRKIKVNIPA  236 (386)
T ss_pred             CCCCCCcCCCCCCccCCCCCCEEEEEEEEeccCceEEEE-EECCCCCcceeecc--CCCCCCCCCcEEeeeeEEEEecCC
Confidence            999999987664 79999999999999999999998876 69999999999986  889999999999999999999999


Q ss_pred             CCCCCCEEEeCCCCCCC-CCCCCccEEEEEEEecCCccccccccceeeeccCHHHHhCCCEEEEEecCCcEEEEEeCCCc
Q 016833          194 GMQNGQKITFPGEADEA-PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGE  272 (382)
Q Consensus       194 G~~~g~~i~~~geG~~~-~g~~~GDl~v~i~~k~h~~F~R~g~DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~  272 (382)
                      |+++|++|+|+|+|++. .+..+|||||+|++++|+.|+|+|+||+++++|||.|||+|+++.|+||||+ +.|.||++ 
T Consensus       237 G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~-~~v~ip~g-  314 (386)
T PRK14277        237 GIDDGQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDAALGGEIEIPTLDGK-VKFTIPEG-  314 (386)
T ss_pred             CccCCcEEEEccccccCCCCCCCccEEEEEEEecCCCeEEecCCEEEEEEcCHHHHhCCCEEEEEcCCCC-EEEEECCC-
Confidence            99999999999999984 4567899999999999999999999999999999999999999999999998 89999998 


Q ss_pred             cccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHhCCC
Q 016833          273 VVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPP  325 (382)
Q Consensus       273 vi~~g~~~~i~g~GmP~~~~~~~~GdL~i~~~V~~P~~l~~~~~~~l~~~lp~  325 (382)
                       +++|++++|+|+|||..+. ..+|||||+|+|.||+.|+++|+++|++|+..
T Consensus       315 -~~~g~~~ri~g~G~p~~~~-~~~GDL~v~~~V~~P~~Ls~~qk~~l~~l~~~  365 (386)
T PRK14277        315 -TQTGTKFRLRGKGIPHLRG-RGRGDQIVKVYIEVPKKLTEKQKELLREFEKL  365 (386)
T ss_pred             -CCCCCEEEECCCCCCCCCC-CCCCCEEEEEEEEeCCCCCHHHHHHHHHHHhh
Confidence             7899999999999997643 36899999999999999999999999999853

>PRK14280 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.4e-71  Score=554.72  Aligned_cols=305  Identities=31%  Similarity=0.626  Sum_probs=270.9

Q ss_pred             CcchhhhcCCCCC------------------------------------ce-eccCccccccccccchhhhhCCCCC-C-
Q 016833           11 NTKYYEILGVSKK------------------------------------RF-VLSDPEKREIYDQYGEDALKEGMGG-G-   51 (382)
Q Consensus        11 ~~~~Y~iLgv~~~------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g~~~-~-   51 (382)
                      .+|||+||||+++                                    || |||||+||++||+||++++++++++ + 
T Consensus         3 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~~~~~   82 (376)
T PRK14280          3 KRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGFGGGGF   82 (376)
T ss_pred             CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhccHhHHHHHHhcCccccccCcCCCCC
Confidence            4799999999999                                    99 9999999999999999887643211 1 


Q ss_pred             --CC---CCCchhhhhcccCCCCCCCCCCCCccccCCceeEeccccccccccCcceeEEeeceeeeCCCCCCCCccCCCc
Q 016833           52 --GG---AHDPFDIFQSFFGGSPFGGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGAS  126 (382)
Q Consensus        52 --~~---~~~~~d~F~~~Fggg~f~g~~~~~~~~~kg~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~  126 (382)
                        .+   ++++.|+|++|||+++   .++..+.++++.|+.+.|.|||||+|+|+++++.+++.+.|+.|+|+|...+..
T Consensus        83 ~~~~~~~~~~~~d~f~~~fgg~~---~~~~~~~~~kg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~  159 (376)
T PRK14280         83 GGGDFGGGFGFEDIFSSFFGGGG---RRRDPNAPRQGADLQYTMTLTFEEAVFGKEKEIEIPKEETCDTCHGSGAKPGTS  159 (376)
T ss_pred             CCCCccccccchhhHHHHhCCcc---ccCcccccccccCEEEEEEEEHHHHhCCceeEEEEeeeccCCCCCCcccCCCCC
Confidence              01   1256799999997421   111123345799999999999999999999999999999999999999987764


Q ss_pred             -ccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCCCceEEEeceEEEEEeccCCCCCCEEEeCC
Q 016833          127 -MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG  205 (382)
Q Consensus       127 -~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G~~~g~~i~~~g  205 (382)
                       .+|+.|+|+|++...++++|||++ ++.+|+.|+|+|+++.  +.|+.|+|++++.+.++++|.||+|+++|++|+|+|
T Consensus       160 ~~~C~~C~G~G~~~~~~~~~~g~~~-~~~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~i~l~G  236 (376)
T PRK14280        160 KETCSHCGGSGQVSVEQNTPFGRVV-NRQTCPHCNGTGQEIK--EKCPTCHGKGKVRKRKKINVKIPAGVDNGQQIRVSG  236 (376)
T ss_pred             CccCCCCCCEEEEEEEeecCCceEE-EEEEcCCCCCCCceec--CCCCCCCCceEEEEEEEEEEEeCCCCcCCcEEEEcc
Confidence             789999999999999999999987 4779999999999986  889999999999999999999999999999999999


Q ss_pred             CCCCCC-CCCCccEEEEEEEecCCccccccccceeeeccCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEEEEcC
Q 016833          206 EADEAP-DTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAIND  284 (382)
Q Consensus       206 eG~~~~-g~~~GDl~v~i~~k~h~~F~R~g~DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~i~g  284 (382)
                      +|++.+ +..+|||||+|++++|+.|+|+|+||++++.|||.|||+|+++.|+||||+ +.|+||++  +++|++++|+|
T Consensus       237 ~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~-i~v~ip~g--~~~g~~~~i~g  313 (376)
T PRK14280        237 EGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVPTLHGK-VKLKIPAG--TQTGTQFRLKG  313 (376)
T ss_pred             cccCCCCCCCCcCEEEEEEEecCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCce-EEEEECCC--CCCCcEEEEcC
Confidence            999855 567899999999999999999999999999999999999999999999997 79999998  79999999999


Q ss_pred             CCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHhCCC
Q 016833          285 EGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPP  325 (382)
Q Consensus       285 ~GmP~~~~~~~~GdL~i~~~V~~P~~l~~~~~~~l~~~lp~  325 (382)
                      +|||..+ ...+|||||+|+|.||++||++|+++|++++..
T Consensus       314 ~G~p~~~-~~~~GDL~v~~~v~~P~~Ls~~q~~~l~~l~~~  353 (376)
T PRK14280        314 KGVPNVR-GYGQGDQYVVVRVVTPTKLTDRQKELLREFAEL  353 (376)
T ss_pred             CCCCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence            9999764 346899999999999999999999999999853

>PRK14286 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.4e-71  Score=553.66  Aligned_cols=305  Identities=31%  Similarity=0.668  Sum_probs=266.5

Q ss_pred             CcchhhhcCCCCC-------------------------------------ce-eccCccccccccccchhhhhCCCCC-C
Q 016833           11 NTKYYEILGVSKK-------------------------------------RF-VLSDPEKREIYDQYGEDALKEGMGG-G   51 (382)
Q Consensus        11 ~~~~Y~iLgv~~~-------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g~~~-~   51 (382)
                      ++|||+||||+++                                     || |||||+||++||+||+++++.+.++ +
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~~~~   82 (372)
T PRK14286          3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGAGGFG   82 (372)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHHhCchhhccccCCCC
Confidence            4799999999999                                     99 9999999999999999887632111 1


Q ss_pred             -CC-------CCCchhhhhcccCCCCCCC-CCCCCccccCCceeEeccccccccccCcceeEEeeceeeeCCCCCCCCcc
Q 016833           52 -GG-------AHDPFDIFQSFFGGSPFGG-GSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSK  122 (382)
Q Consensus        52 -~~-------~~~~~d~F~~~Fggg~f~g-~~~~~~~~~kg~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~  122 (382)
                       ++       +.++.|+|++|||+++.++ .+.+..++.++.|+.+.|.|||||+|+|+++++.+++.+.|+.|+|+|.+
T Consensus        83 ~~~~~~~~~~~~~~~d~f~~ffgg~~~~~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~~C~G~G~~  162 (372)
T PRK14286         83 QGAYTDFSDIFGDFGDIFGDFFGGGRGGGSGGGRRSGPQRGSDLRYNLEVSLEDAALGREYKIEIPRLESCVDCNGSGAS  162 (372)
T ss_pred             CCCcccccccccchhhHHHHhhCCCccCCCcccccCCCCCCCCeeEEEEEEHHHHhCCeeEEEEeeccccCCCCcCCCcC
Confidence             11       1246689999998532110 01112234679999999999999999999999999999999999999998


Q ss_pred             CCCc-ccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCCCceEEEeceEEEEEeccCCCCCCEE
Q 016833          123 SGAS-MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKI  201 (382)
Q Consensus       123 ~~~~-~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G~~~g~~i  201 (382)
                      .+.. .+|+.|+|+|+++..+    ||++ ++++|+.|+|+|+++.  ++|+.|+|++++.+.+.++|+||||+++|++|
T Consensus       163 ~~~~~~~C~~C~G~G~v~~~~----G~~~-~~~~C~~C~G~G~~~~--~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i  235 (372)
T PRK14286        163 KGSSPTTCPDCGGSGQIRRTQ----GFFS-VATTCPTCRGKGTVIS--NPCKTCGGQGLQEKRRTINIKIPPGVETGSRL  235 (372)
T ss_pred             CCCCCccCCCCcCeEEEEEEe----ceEE-EEEeCCCCCceeeEec--ccCCCCCCCcEEecceEEEEEECCCCCCCCEE
Confidence            7764 7899999999876543    5664 7889999999999986  88999999999999999999999999999999


Q ss_pred             EeCCCCCCCC-CCCCccEEEEEEEecCCccccccccceeeeccCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEE
Q 016833          202 TFPGEADEAP-DTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFK  280 (382)
Q Consensus       202 ~~~geG~~~~-g~~~GDl~v~i~~k~h~~F~R~g~DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~  280 (382)
                      +|+|+|++.+ +..+|||||+|++++|+.|+|+|+||++++.|+|.|||+|+++.|+||||+.|.|++|++  +++|+++
T Consensus       236 ~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~i~v~ip~g--~~~g~~~  313 (372)
T PRK14286        236 KVSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPTIDGKKAKMKIPEG--TESGQVF  313 (372)
T ss_pred             EECCccccCCCCCCCceEEEEEEEccCCCEEEecCCEEEEEEECHHHHhCCCEEEEeCCCCCEEEEEeCCc--cCCCcEE
Confidence            9999999866 456799999999999999999999999999999999999999999999999899999998  7999999


Q ss_pred             EEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHhCCC
Q 016833          281 AINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPP  325 (382)
Q Consensus       281 ~i~g~GmP~~~~~~~~GdL~i~~~V~~P~~l~~~~~~~l~~~lp~  325 (382)
                      +|+|+|||..+ ...+|||||+|+|.||+.|+++|+++|++|+..
T Consensus       314 ri~G~G~P~~~-~~~~GDL~V~~~V~~P~~Ls~~qk~~l~~l~~~  357 (372)
T PRK14286        314 RLKGHGMPYLG-AYGKGDQHVIVKIEIPKKITRRQRELIEEFARE  357 (372)
T ss_pred             EECCCCCCCCC-CCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHh
Confidence            99999999764 346899999999999999999999999999964

>PRK14287 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.9e-71  Score=552.62  Aligned_cols=305  Identities=28%  Similarity=0.586  Sum_probs=271.7

Q ss_pred             CcchhhhcCCCCC------------------------------------ce-eccCccccccccccchhhhhCCCCC-C-
Q 016833           11 NTKYYEILGVSKK------------------------------------RF-VLSDPEKREIYDQYGEDALKEGMGG-G-   51 (382)
Q Consensus        11 ~~~~Y~iLgv~~~------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g~~~-~-   51 (382)
                      .+|||+||||+++                                    || |||||+||++||+||++++++++++ + 
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~~~~~~~~~~~   82 (371)
T PRK14287          3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQGFGGGGA   82 (371)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCcccccccCCCCC
Confidence            5799999999999                                    99 9999999999999999887643211 1 


Q ss_pred             CCCCCchhhhhcccCCCCCCCCCCCCccccCCceeEeccccccccccCcceeEEeeceeeeCCCCCCCCccCCCc-ccCC
Q 016833           52 GGAHDPFDIFQSFFGGSPFGGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGAS-MKCS  130 (382)
Q Consensus        52 ~~~~~~~d~F~~~Fggg~f~g~~~~~~~~~kg~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~-~~C~  130 (382)
                      +++.++.|+|++|||+++   +.+..++++++.|+.+.|.|||+|+|+|+++++.+++.+.|+.|+|+|...+.. .+|+
T Consensus        83 ~~f~~~~d~f~~~fgg~~---~~~~~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~  159 (371)
T PRK14287         83 GDFGGFSDIFDMFFGGGG---GRRNPNAPRQGADLQYTMTLEFKEAVFGKETEIEIPREETCGTCHGSGAKPGTKPETCS  159 (371)
T ss_pred             ccccchHHHHHhhhcccc---CCCCCCCCCCCCCEEEEEEEEHHHhcCCeEEEEEEeeeccCCCCCCcccCCCCCCcccC
Confidence            122346799999998521   111122345799999999999999999999999999999999999999987764 7899


Q ss_pred             CCCcccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCCCceEEEeceEEEEEeccCCCCCCEEEeCCCCCCC
Q 016833          131 GCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEA  210 (382)
Q Consensus       131 ~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G~~~g~~i~~~geG~~~  210 (382)
                      .|+|+|++...++++|||+++ +.+|+.|.|+|+++.  +.|..|+|++++.+.++++|.||||+++|++|+|+|+|++.
T Consensus       160 ~C~G~G~~~~~~~~~~G~~~~-~~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~G~G~~~  236 (371)
T PRK14287        160 HCGGSGQLNVEQNTPFGRVVN-RRVCHHCEGTGKIIK--QKCATCGGKGKVRKRKKINVKVPAGIDHGQQLRVSGQGEAG  236 (371)
T ss_pred             CCCCEEEEEEEEecCCceEEE-EEeCCCCCCCCcccc--ccCCCCCCeeEEeeeEEEEEEECCcCCCCCEEEEccCCcCC
Confidence            999999999999999999876 779999999999986  88999999999999999999999999999999999999986


Q ss_pred             C-CCCCccEEEEEEEecCCccccccccceeeeccCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEEEEcCCCCCC
Q 016833          211 P-DTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPM  289 (382)
Q Consensus       211 ~-g~~~GDl~v~i~~k~h~~F~R~g~DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~i~g~GmP~  289 (382)
                      + +..+|||||+|++++|+.|+|+|+||++++.|||.|||+|+++.|+||||+ +.|+||||  +++|++++|+|+|||.
T Consensus       237 ~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~-i~v~ip~g--~~~g~~~ri~g~G~p~  313 (371)
T PRK14287        237 VNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTLNGK-VKLKIPAG--TQTGTSFRLRGKGVPN  313 (371)
T ss_pred             CCCCCCccEEEEEEEecCCCEEEecCCeEEEEeccHHHHhCCCEEEEEcCCCC-EEEEECCC--ccCCcEEEEcCCCccC
Confidence            4 568899999999999999999999999999999999999999999999998 89999998  7999999999999997


Q ss_pred             CCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHhCCC
Q 016833          290 YQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPP  325 (382)
Q Consensus       290 ~~~~~~~GdL~i~~~V~~P~~l~~~~~~~l~~~lp~  325 (382)
                      .++ ..+|||||+|+|.||+.|+++|+++|++++..
T Consensus       314 ~~~-~~~GDL~V~~~v~~P~~l~~~q~~ll~~l~~~  348 (371)
T PRK14287        314 VHG-RGQGDQHVQVRVVTPKNLTEKEKELMREFAGM  348 (371)
T ss_pred             CCC-CCCCCEEEEEEEEcCCCCCHHHHHHHHHHHhh
Confidence            643 35899999999999999999999999999953

>PRK14278 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.4e-71  Score=553.11  Aligned_cols=307  Identities=29%  Similarity=0.598  Sum_probs=270.0

Q ss_pred             CcchhhhcCCCCC------------------------------------ce-eccCccccccccccchhhhhCCC-CCC-
Q 016833           11 NTKYYEILGVSKK------------------------------------RF-VLSDPEKREIYDQYGEDALKEGM-GGG-   51 (382)
Q Consensus        11 ~~~~Y~iLgv~~~------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g~-~~~-   51 (382)
                      .+|||+||||+++                                    || |||||+||++||+||+++..++. +++ 
T Consensus         2 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~~~~~~~~~~g~   81 (378)
T PRK14278          2 ARDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEEAQEKFKEISVAYEVLSDPEKRRIVDLGGDPLESAGGGGGGF   81 (378)
T ss_pred             CCCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCCcHHHHHHHHHHHHHHHHhchhhhhhhhhccCCccccccCCCCCC
Confidence            3799999999998                                    99 99999999999999986433211 111 


Q ss_pred             -CCCCCchhhhhcccCCCCCCCCCCCCccccCCceeEeccccccccccCcceeEEeeceeeeCCCCCCCCccCCCc-ccC
Q 016833           52 -GGAHDPFDIFQSFFGGSPFGGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGAS-MKC  129 (382)
Q Consensus        52 -~~~~~~~d~F~~~Fggg~f~g~~~~~~~~~kg~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~-~~C  129 (382)
                       +++.++.|+|++|||+++  ++.....+++++.|+.+.|.|||||+|+|+++++.+++.+.|+.|+|+|.+.+.. .+|
T Consensus        82 ~~~f~~~~d~f~~ffgg~g--~~~~~~~~~~~g~d~~~~l~vtLee~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C  159 (378)
T PRK14278         82 GGGFGGLGDVFEAFFGGGA--ASRGPRGRVRPGSDSLLRMRLDLEECATGVTKQVTVDTAVLCDRCHGKGTAGDSKPVTC  159 (378)
T ss_pred             CcCcCchhHHHHHHhCCCC--CCCCCccCCCCCCCeEEEEEEEHHHhcCCeEEEEEEEeeccCCCCcCccCCCCCCceec
Confidence             112346789999998521  1111112346799999999999999999999999999999999999999988764 789


Q ss_pred             CCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCCCceEEEeceEEEEEeccCCCCCCEEEeCCCCCC
Q 016833          130 SGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADE  209 (382)
Q Consensus       130 ~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G~~~g~~i~~~geG~~  209 (382)
                      +.|+|+|+++..++.++|++++ +.+|+.|+|+|+++.  +.|+.|+|++++.+.++++|.||||+++|++|+|+|+|++
T Consensus       160 ~~C~G~G~~~~~~~~~~g~~~~-~~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~  236 (378)
T PRK14278        160 DTCGGRGEVQTVQRSFLGQVMT-SRPCPTCRGVGEVIP--DPCHECAGDGRVRARREITVKIPAGVGDGMRIRLAAQGEV  236 (378)
T ss_pred             CCccCceEEEEEEeccceeEEE-EEECCCCCccceeeC--CCCCCCCCceeEecceEEEEEECCCCCCCcEEEEccCcCC
Confidence            9999999999988899998875 569999999999986  8899999999999999999999999999999999999999


Q ss_pred             CC-CCCCccEEEEEEEecCCccccccccceeeeccCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEEEEcCCCCC
Q 016833          210 AP-DTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMP  288 (382)
Q Consensus       210 ~~-g~~~GDl~v~i~~k~h~~F~R~g~DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~i~g~GmP  288 (382)
                      .+ +..+|||||+|++++|+.|+|+|+||+++++|+|.+||+|+++.|+|||++.+.|+||++  +++|++++|+|+|||
T Consensus       237 ~~~~~~~GDL~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tld~~~i~v~ip~g--~~~g~~lrl~g~G~p  314 (378)
T PRK14278        237 GPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVTVEAILDGPSEITIPPG--TQPGSVITLRGRGMP  314 (378)
T ss_pred             CCCCCCCCCEEEEEEECcCCCEEEcCCCEEEEEecCHHHHhcCCeEEEecCCCCeEEEEeCCC--cCCCcEEEECCCCCC
Confidence            77 457799999999999999999999999999999999999999999999877899999998  799999999999999


Q ss_pred             CCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHhCCC
Q 016833          289 MYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPP  325 (382)
Q Consensus       289 ~~~~~~~~GdL~i~~~V~~P~~l~~~~~~~l~~~lp~  325 (382)
                      ..+ ...+|||||+|+|.||++||++|+++|+++++.
T Consensus       315 ~~~-~~~~GDL~V~~~V~~P~~Ls~~qk~~l~~~~~~  350 (378)
T PRK14278        315 HLR-SGGRGDLHAHVEVVVPTRLDHEDIELLRELKAL  350 (378)
T ss_pred             CCC-CCCCCCEEEEEEEEcCCCCCHHHHHHHHHHHhh
Confidence            764 346899999999999999999999999999964

>PRK14297 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=7.6e-71  Score=550.40  Aligned_cols=308  Identities=31%  Similarity=0.635  Sum_probs=271.6

Q ss_pred             CcchhhhcCCCCC-------------------------------------ce-eccCccccccccccchhhhhCCCC---
Q 016833           11 NTKYYEILGVSKK-------------------------------------RF-VLSDPEKREIYDQYGEDALKEGMG---   49 (382)
Q Consensus        11 ~~~~Y~iLgv~~~-------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g~~---   49 (382)
                      .+|||+||||+++                                     || |||||+||++||+||+++++++.+   
T Consensus         3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~~~~~~~~~~   82 (380)
T PRK14297          3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAGGFGS   82 (380)
T ss_pred             CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcCHhhhCchhhcCcccccccCCCCC
Confidence            4799999999999                                     99 999999999999999988753211   


Q ss_pred             CCCCC------CCchhhhhcccCCCCCCCCCCCCccccCCceeEeccccccccccCcceeEEeeceeeeCCCCCCCCccC
Q 016833           50 GGGGA------HDPFDIFQSFFGGSPFGGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKS  123 (382)
Q Consensus        50 ~~~~~------~~~~d~F~~~Fggg~f~g~~~~~~~~~kg~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~  123 (382)
                      ++.++      .++.|+|++|||++ +++.+++..+++++.|+++.|.|||||+|+|+++++.+++.+.|+.|+|+|...
T Consensus        83 ~~~~~~~~~~~~~~~d~f~~~fgg~-~g~~~~~~~~~~kg~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~  161 (380)
T PRK14297         83 GGFGGFDFSDMGGFGDIFDSFFGGG-FGSSSRRRNGPQRGADIEYTINLTFEEAVFGVEKEISVTRNENCETCNGTGAKP  161 (380)
T ss_pred             CCCCCcCcccccchhHHHHHHhccC-ccccccccCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeeeccCCCcccccccC
Confidence            11011      24569999999852 211111223346799999999999999999999999999999999999999987


Q ss_pred             CCc-ccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCCCceEEEeceEEEEEeccCCCCCCEEE
Q 016833          124 GAS-MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKIT  202 (382)
Q Consensus       124 ~~~-~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G~~~g~~i~  202 (382)
                      +.. .+|+.|+|+|+++..++++||+++ ++.+|+.|+|+|+++.  +.|..|+|++++.+.++++|.||||+++|++|+
T Consensus       162 ~~~~~~C~~C~G~G~~~~~~~~~~G~~~-~~~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~I~  238 (380)
T PRK14297        162 GTSPKTCDKCGGTGQIRVQRNTPLGSFV-STTTCDKCGGSGKVIE--DPCNKCHGKGKVRKNRKIKVNVPAGVDTGNVIP  238 (380)
T ss_pred             CCcCccCCCccCeEEEEEEEEcCCceeE-EEEeCCCCCCCceEcC--CCCCCCCCCeEEEeEeEEEEEeCCCCCCCcEEE
Confidence            764 789999999999999999999875 4889999999999986  889999999999999999999999999999999


Q ss_pred             eCCCCCCCC-CCCCccEEEEEEEecCCccccccccceeeeccCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEEE
Q 016833          203 FPGEADEAP-DTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKA  281 (382)
Q Consensus       203 ~~geG~~~~-g~~~GDl~v~i~~k~h~~F~R~g~DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~  281 (382)
                      |+|+|++.+ +..+|||||+|++++|+.|+|+|+||+++++|+|.|||+|+++.|+||||+ +.|+||++  +++|++++
T Consensus       239 l~g~G~~~~~~~~~GDL~v~v~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~-~~v~ip~g--~~~g~~~r  315 (380)
T PRK14297        239 LRGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIKVPTVDGE-VKYEVPAG--TQPGTVFR  315 (380)
T ss_pred             EecCccCCCCCCCCccEEEEEEEcCCCCEEEeCCCEEEEEEeCHHHHhCCCcEEEEcCCCc-EEEEECCC--cCCCCEEE
Confidence            999999854 567899999999999999999999999999999999999999999999997 89999998  79999999


Q ss_pred             EcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHhCCCC
Q 016833          282 INDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPR  326 (382)
Q Consensus       282 i~g~GmP~~~~~~~~GdL~i~~~V~~P~~l~~~~~~~l~~~lp~~  326 (382)
                      |+|+|||..+ ...+|||||+|+|.||+.|+++|+++|+++++..
T Consensus       316 i~g~G~p~~~-~~~~GDL~v~~~v~~P~~ls~~q~~~l~~~~~~~  359 (380)
T PRK14297        316 LKGKGVPRVN-STGRGNQYVTVIVDIPKKLNSKQKEALTMFMEAS  359 (380)
T ss_pred             EcCCCcCCCC-CCCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHhc
Confidence            9999999763 3468999999999999999999999999999743

>PRK14282 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=5.7e-70  Score=542.20  Aligned_cols=308  Identities=30%  Similarity=0.593  Sum_probs=269.9

Q ss_pred             CcchhhhcCCCCC--------------------------------------ce-eccCccccccccccchhhhhCCC---
Q 016833           11 NTKYYEILGVSKK--------------------------------------RF-VLSDPEKREIYDQYGEDALKEGM---   48 (382)
Q Consensus        11 ~~~~Y~iLgv~~~--------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g~---   48 (382)
                      .+|||+||||+++                                      || |||||+||++||+||++++..+.   
T Consensus         3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~~~~~~~~~   82 (369)
T PRK14282          3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPPYQET   82 (369)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcCccccccccccC
Confidence            5799999999999                                      99 99999999999999988764211   


Q ss_pred             CCCCCC-C----Cc-----hhhhhcccCCCCCCCCCCCCccccCCceeEeccccccccccCcceeEEeeceeeeCCCCCC
Q 016833           49 GGGGGA-H----DP-----FDIFQSFFGGSPFGGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKG  118 (382)
Q Consensus        49 ~~~~~~-~----~~-----~d~F~~~Fggg~f~g~~~~~~~~~kg~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G  118 (382)
                      ++++++ .    ++     .|+|++|||+++  ++.++..+++++.|+.+.|.|||+|+|+|++++++++|.+.|+.|+|
T Consensus        83 ~~~g~~~~~~~~~~~~~~~~d~f~~~fgg~~--~~~~~~~~~~~g~di~~~l~~slee~~~G~~~~i~~~r~~~C~~C~G  160 (369)
T PRK14282         83 ESGGGFFEDIFKDFENIFNRDIFDIFFGERR--TQEEQREYARRGEDIRYEIEVTLSDLINGAEIPVEYDRYETCPHCGG  160 (369)
T ss_pred             CCCCcccccccccccccccchhhhHhhcccC--CcccccCCCCCCCCeEEEEEEEHHHhcCCeEEEEEeeecccCCCCCc
Confidence            111111 1    11     278888887421  11111233467999999999999999999999999999999999999


Q ss_pred             CCccCCCc-ccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCCCceEEEeceEEEEEeccCCCC
Q 016833          119 KGSKSGAS-MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQN  197 (382)
Q Consensus       119 ~G~~~~~~-~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G~~~  197 (382)
                      +|+..+.. .+|+.|+|+|+++..++++|||+++ +.+|+.|+|+|+++.  +.|+.|+|++++.+.++|+|+||||+.+
T Consensus       161 ~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~-~~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~l~V~Ip~G~~~  237 (369)
T PRK14282        161 TGVEPGSGYVTCPKCHGTGRIREERRSFFGVFVS-ERTCERCGGTGKIPG--EYCHECGGSGRIRRRVRTTVKIPAGVED  237 (369)
T ss_pred             cCCCCCCCCcCCCCCCCcCEEEEEEEccCcceEE-EEECCCCCCcceeCC--CCCCCCCCceeEEEEEEEEEEeCCCCCC
Confidence            99988764 7999999999999999999999875 679999999999976  8899999999999999999999999999


Q ss_pred             CCEEEeCCCCCCCC-CCCCccEEEEEEEecCCccccccccceeeeccCHHHHhCCCEEEEEecCCcEEEEEeCCCccccC
Q 016833          198 GQKITFPGEADEAP-DTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKP  276 (382)
Q Consensus       198 g~~i~~~geG~~~~-g~~~GDl~v~i~~k~h~~F~R~g~DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~  276 (382)
                      |++|+|+|+|++.+ +..+|||||+|++++|+.|+|+|+||+++++|||.|||+|+++.|+||||+.|.|+||||  +++
T Consensus       238 G~~i~~~g~G~~~~~~~~~GDl~i~i~v~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~i~v~Ip~g--~~~  315 (369)
T PRK14282        238 GTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTVEVPLPEGGTTMLKIPPG--TQP  315 (369)
T ss_pred             CCEEEEecccCCCCCCCCCCCEEEEEEEecCCcEEEecCCEEEEEEeCHHHHhCCCEEEEeCCCCcEEEEEeCCC--cCC
Confidence            99999999999854 678899999999999999999999999999999999999999999999999899999998  799


Q ss_pred             CcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHhCCCC
Q 016833          277 DQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPR  326 (382)
Q Consensus       277 g~~~~i~g~GmP~~~~~~~~GdL~i~~~V~~P~~l~~~~~~~l~~~lp~~  326 (382)
                      |++++|+|+|||..+ ...+|||||+|+|.+|+.|+++++++|++|+...
T Consensus       316 g~~iri~GkG~p~~~-~~~~GDL~V~~~v~~P~~l~~~~~~ll~~l~~~~  364 (369)
T PRK14282        316 ETVFRLKGKGLPNMR-YGRRGDLIVNVHVEIPKRLSREERKLLKELAKKR  364 (369)
T ss_pred             CCEEEECCCCCCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHhc
Confidence            999999999999753 3458999999999999999999999999998643

>PRK14285 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=5.5e-70  Score=541.04  Aligned_cols=304  Identities=34%  Similarity=0.657  Sum_probs=267.9

Q ss_pred             CcchhhhcCCCCC-------------------------------------ce-eccCccccccccccchhhhhCCCC--C
Q 016833           11 NTKYYEILGVSKK-------------------------------------RF-VLSDPEKREIYDQYGEDALKEGMG--G   50 (382)
Q Consensus        11 ~~~~Y~iLgv~~~-------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g~~--~   50 (382)
                      .+|||+||||+++                                     || |||||+||+.||+||+++++++++  +
T Consensus         2 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~~~~~~~~~~   81 (365)
T PRK14285          2 KRDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGGGGFEG   81 (365)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHcCcchhHHHHhcCcchhccCCCccc
Confidence            4799999999999                                     99 999999999999999988764311  1


Q ss_pred             ---CCC-----CCCchhhhhcccCCCCCCCCCCCCccccCCceeEeccccccccccCcceeEEeeceeeeCCCCCCCCcc
Q 016833           51 ---GGG-----AHDPFDIFQSFFGGSPFGGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSK  122 (382)
Q Consensus        51 ---~~~-----~~~~~d~F~~~Fggg~f~g~~~~~~~~~kg~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~  122 (382)
                         +..     +.++.|+|++|||++.   ++.+.++++++.|+.++|.|||||+|+|++++++++|.+.|+.|+|+|..
T Consensus        82 ~~~g~~~~~~~~~~~~d~f~~~fgg~~---~~~~~~~~~~g~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~  158 (365)
T PRK14285         82 FSGGFSGFSDIFEDFGDIFDSFFTGNR---GQDKNRKHEKGQDLTYQIEISLEDAYLGYKNNINITRNMLCESCLGKKSE  158 (365)
T ss_pred             cCCCccccccccccHHHHHHHhhcCCc---CCCCCcCCCCCCCEEEEEEEEHHHhhCCeEEEEEeeecccCCCCCCcccC
Confidence               101     1246689999997421   11111234679999999999999999999999999999999999999998


Q ss_pred             CCCc-ccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCCCceEEEeceEEEEEeccCCCCCCEE
Q 016833          123 SGAS-MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKI  201 (382)
Q Consensus       123 ~~~~-~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G~~~g~~i  201 (382)
                      .+.. .+|+.|+|+|+++.    ++||+ |++.+|+.|.|+|+++.  +.|..|+|++++.+.++++|+||||+++|++|
T Consensus       159 ~~~~~~~C~~C~G~G~~~~----~~G~~-~~~~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i  231 (365)
T PRK14285        159 KGTSPSICNMCNGSGRVMQ----GGGFF-RVTTTCPKCYGNGKIIS--NPCKSCKGKGSLKKKETIELKIPAGIDDNQQI  231 (365)
T ss_pred             CCCCCccCCCccCceeEEe----cCcee-EEeeecCCCCCcccccC--CCCCCCCCCCEEeccEEEEEEECCCCCCCCEE
Confidence            8764 78999999998763    57787 77999999999999986  88999999999999999999999999999999


Q ss_pred             EeCCCCCCCCC-CCCccEEEEEEEecCCccccccccceeeeccCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEE
Q 016833          202 TFPGEADEAPD-TVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFK  280 (382)
Q Consensus       202 ~~~geG~~~~g-~~~GDl~v~i~~k~h~~F~R~g~DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~  280 (382)
                      +|+|+|++.++ ..+|||||+|++++|+.|+|+|+||+++++|||.|||+|+++.|+||||+.|.|+||+|  +++|+++
T Consensus       232 ~~~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~dL~~~~~Isl~eAl~G~~~~i~tldG~~v~V~Ip~g--~~~g~~i  309 (365)
T PRK14285        232 KMRGKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQTIASKKIKIKIPKG--TENDEQI  309 (365)
T ss_pred             EEeeccccCCCCCCCCCEEEEEEEecCCCeEEeccceEEEEecCHHHHhCCCEEEEECCCCCEEEEEeCCC--cCCCcEE
Confidence            99999999764 56899999999999999999999999999999999999999999999999999999998  7999999


Q ss_pred             EEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHhCCCCC
Q 016833          281 AINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPRT  327 (382)
Q Consensus       281 ~i~g~GmP~~~~~~~~GdL~i~~~V~~P~~l~~~~~~~l~~~lp~~~  327 (382)
                      +|+|+|||..+. ..+|||||+|+|.+|+.|+++++++|++++...+
T Consensus       310 rl~GkG~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~~l~~l~~~~~  355 (365)
T PRK14285        310 IIKNEGMPILHT-EKFGNLILIIKIKTPKNLNSNAIKLLENLSKELK  355 (365)
T ss_pred             EECCCCccCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHhc
Confidence            999999997643 3579999999999999999999999999986544

>PRK14281 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.2e-69  Score=543.98  Aligned_cols=308  Identities=32%  Similarity=0.638  Sum_probs=268.7

Q ss_pred             CcchhhhcCCCCC-------------------------------------ce-eccCccccccccccchhhhhCCC---C
Q 016833           11 NTKYYEILGVSKK-------------------------------------RF-VLSDPEKREIYDQYGEDALKEGM---G   49 (382)
Q Consensus        11 ~~~~Y~iLgv~~~-------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g~---~   49 (382)
                      .+|||+||||+++                                     || |||||+||++||+||+++++++.   +
T Consensus         2 ~~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~~~~~~~~~~~   81 (397)
T PRK14281          2 KRDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASGG   81 (397)
T ss_pred             CCChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhccchhhccccccCC
Confidence            4799999999999                                     99 99999999999999998876321   1


Q ss_pred             -CC--CCCCCchhhh---hcccCCCC-C------------CCCCCCC--ccccCCceeEeccccccccccCcceeEEeec
Q 016833           50 -GG--GGAHDPFDIF---QSFFGGSP-F------------GGGSSRG--RRQRRGEDVIHPLKVSLEDLYNGTSKKLSLS  108 (382)
Q Consensus        50 -~~--~~~~~~~d~F---~~~Fggg~-f------------~g~~~~~--~~~~kg~di~~~l~vtlee~~~G~~~~i~~~  108 (382)
                       ++  +++.++.|+|   ++|||+++ +            +++..+.  ..+.++.|+.+.|.|||||+|+|+++++.++
T Consensus        82 ~~~~~~~~~~~~d~f~~f~~~Fgg~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~~~i~~~  161 (397)
T PRK14281         82 GPGYGGGGGDFNDIFSAFNDMFGGGARRGGGSPFGFEDVFGGGGRRRRASAGIPGTDLKIRLKLTLEEIAKGVEKTLKIK  161 (397)
T ss_pred             CCCCCcCCCCHHHHHHHHHHHhCCCcccccccccccccccCCCcccccccCCCCCCCEEEEEEeEHHHHhCCeEEEEEEE
Confidence             11  1122455665   47887421 1            1110111  1234789999999999999999999999999


Q ss_pred             eeeeCCCCCCCCccCCCcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCCCceEEEeceEEE
Q 016833          109 RNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLE  188 (382)
Q Consensus       109 r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~G~g~~~~~~~l~  188 (382)
                      +.+.|+.|+|+|...+...+|+.|+|+|+++..+++++|++++ +.+|+.|.|+|+++.  ++|+.|+|++++.+.++++
T Consensus       162 r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~-~~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~~~  238 (397)
T PRK14281        162 KQVPCKECNGTGSKTGATETCPTCHGSGEVRQASKTMFGQFVN-ITACPTCGGEGRVVK--DRCPACYGEGIKQGEVTVK  238 (397)
T ss_pred             eeecCCCCCCcccCCCCCccCCCCCCCcEEEEEEecccceEEE-EEecCCCcceeeeeC--CCCCCCCCCccEecceEEE
Confidence            9999999999999887668999999999999999999998876 679999999999986  8899999999999999999


Q ss_pred             EEeccCCCCCCEEEeCCCCCCCC-CCCCccEEEEEEEecCCccccccccceeeeccCHHHHhCCCEEEEEecCCcEEEEE
Q 016833          189 VIVEKGMQNGQKITFPGEADEAP-DTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIK  267 (382)
Q Consensus       189 V~Ip~G~~~g~~i~~~geG~~~~-g~~~GDl~v~i~~k~h~~F~R~g~DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~  267 (382)
                      |+||||+++|++|+|+|+|++.+ +..+|||||+|++++|+.|+|+|+||+++++|||.|||+|+++.|+||||+ +.|+
T Consensus       239 V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~-i~v~  317 (397)
T PRK14281        239 VTVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSYPDLVLGTKVEVPTLDGA-VKLT  317 (397)
T ss_pred             EecCCCCCCCCEEEEecccccCCCCCCCCcEEEEEEEcCCCCeEEecCCEEEEEEecHHHHhcCCeEEeecCCcc-EEEE
Confidence            99999999999999999999876 568999999999999999999999999999999999999999999999997 8999


Q ss_pred             eCCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHhCCC
Q 016833          268 SQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPP  325 (382)
Q Consensus       268 ~p~g~vi~~g~~~~i~g~GmP~~~~~~~~GdL~i~~~V~~P~~l~~~~~~~l~~~lp~  325 (382)
                      ||++  +++|++++|+|+|||..+ ...+|||||+|+|.||+.||++|+++|++|+..
T Consensus       318 ip~g--~~~G~~~ri~g~G~P~~~-~~~~GDL~V~~~V~~P~~Ls~~qk~~l~~l~~~  372 (397)
T PRK14281        318 IPAG--TQPETMLRIPGKGIGHLR-GSGRGDQYVRVNVFVPKEVSHQDKELLKELKKS  372 (397)
T ss_pred             eCCc--cCCCcEEEEcCCCCCCCC-CCCCCCEEEEEEEEcCCCCCHHHHHHHHHHHhh
Confidence            9998  799999999999999764 346899999999999999999999999999963

>PRK14279 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.7e-69  Score=541.85  Aligned_cols=300  Identities=31%  Similarity=0.601  Sum_probs=256.7

Q ss_pred             CcchhhhcCCCCC-------------------------------------ce-eccCccccccccccchhhhhCCC----
Q 016833           11 NTKYYEILGVSKK-------------------------------------RF-VLSDPEKREIYDQYGEDALKEGM----   48 (382)
Q Consensus        11 ~~~~Y~iLgv~~~-------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g~----   48 (382)
                      .+|||+||||+++                                     || |||||+||++||+||+++..++.    
T Consensus         8 ~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~~~~~~g~~~~~   87 (392)
T PRK14279          8 EKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETRRLFAGGGFGGRR   87 (392)
T ss_pred             ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhcchhhhhHHHHhhhhcccccccccc
Confidence            5899999999998                                     99 99999999999999975322110    


Q ss_pred             --C-CC-CC--------CCCc---------------hhhhhcccCCCCCCCCCCCCccccCCceeEeccccccccccCcc
Q 016833           49 --G-GG-GG--------AHDP---------------FDIFQSFFGGSPFGGGSSRGRRQRRGEDVIHPLKVSLEDLYNGT  101 (382)
Q Consensus        49 --~-~~-~~--------~~~~---------------~d~F~~~Fggg~f~g~~~~~~~~~kg~di~~~l~vtlee~~~G~  101 (382)
                        + ++ ++        ..++               .|+|+.|||++   +++.+..+++++.|+.+.|.|||||+|+|+
T Consensus        88 ~~~~~~~~g~~~~~~~~~~d~~~~f~~~~~~~~~~f~d~f~~~fg~~---~~~~~~~~~~~g~di~~~l~ltLee~~~G~  164 (392)
T PRK14279         88 FDGGGGFGGFGTGGDGAEFNLNDLFDAAGRGGGGGIGDLFGGLFNRG---GGSARPSRPRRGNDLETETTLDFVEAAKGV  164 (392)
T ss_pred             ccCCCCCCCccccccccCcChhhhhcccccccccchhhhhhhhhcCC---CcccccCCCCCCCCeEEEEEEEHHHHhCCe
Confidence              0 00 00        1122               24555555421   111122335679999999999999999999


Q ss_pred             eeEEeeceeeeCCCCCCCCccCCCc-ccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCCCceE
Q 016833          102 SKKLSLSRNVICTKCKGKGSKSGAS-MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKV  180 (382)
Q Consensus       102 ~~~i~~~r~~~C~~C~G~G~~~~~~-~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~G~g~  180 (382)
                      ++++.+++.+.|+.|+|+|...+.. .+|+.|+|+|+++..+  |  ++ +++.+|+.|+|+|+++.  +.|..|+|+++
T Consensus       165 ~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~--g--~~-~~~~~C~~C~G~G~~i~--~~C~~C~G~g~  237 (392)
T PRK14279        165 TMPLRLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISRNQ--G--AF-GFSEPCTDCRGTGSIIE--DPCEECKGTGV  237 (392)
T ss_pred             EEEEeeeccccCCCCccccccCCCCCCCCCCCcceEEEEEEe--c--ce-EEEEecCCCCceeEEeC--CcCCCCCCCeE
Confidence            9999999999999999999988764 7899999999887543  3  44 46799999999999986  88999999999


Q ss_pred             EEeceEEEEEeccCCCCCCEEEeCCCCCCCC-CCCCccEEEEEEEecCCccccccccceeeeccCHHHHhCCCEEEEEec
Q 016833          181 IQEKKVLEVIVEKGMQNGQKITFPGEADEAP-DTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHL  259 (382)
Q Consensus       181 ~~~~~~l~V~Ip~G~~~g~~i~~~geG~~~~-g~~~GDl~v~i~~k~h~~F~R~g~DL~~~~~I~l~eAl~G~~~~i~tl  259 (382)
                      +.+.++++|.||||+++|++|+|+|+|++.+ +..+|||||+|++++|+.|+|+|+||+++++|||.+||+|+++.|+||
T Consensus       238 v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~~l  317 (392)
T PRK14279        238 TTRTRTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELALGSTLSVPTL  317 (392)
T ss_pred             EEEeeeeEEEeCCCCCCCcEEEEeCCccCCCCCCCCCCEEEEEEEecCCcceeecCcEEEEEEccHHHHcCCceEEEEcC
Confidence            9999999999999999999999999999866 567799999999999999999999999999999999999999999999


Q ss_pred             CCcEEEEEeCCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHhCCC
Q 016833          260 DGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPP  325 (382)
Q Consensus       260 dG~~l~i~~p~g~vi~~g~~~~i~g~GmP~~~~~~~~GdL~i~~~V~~P~~l~~~~~~~l~~~lp~  325 (382)
                      ||+ +.|+||+|  +++|++++|+|+|||..  ...+|||||+|+|.||++|+++|+++|++|+..
T Consensus       318 dg~-i~v~Ip~g--~~~g~~iri~g~G~p~~--~~~~GDL~I~~~v~~P~~Ls~~q~~~l~~~~~~  378 (392)
T PRK14279        318 DGP-VGVKVPAG--TADGRILRVRGRGVPKR--SGGAGDLLVTVKVAVPPNLDGAAAEALEAYAEA  378 (392)
T ss_pred             Cce-EEEEECCC--CCCCCEEEECCCCCCCC--CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence            998 89999998  79999999999999963  346899999999999999999999999999963

>PRK14284 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=3.3e-69  Score=540.20  Aligned_cols=303  Identities=31%  Similarity=0.599  Sum_probs=261.2

Q ss_pred             cchhhhcCCCCC-------------------------------------ce-eccCccccccccccchhhhhCCCC--CC
Q 016833           12 TKYYEILGVSKK-------------------------------------RF-VLSDPEKREIYDQYGEDALKEGMG--GG   51 (382)
Q Consensus        12 ~~~Y~iLgv~~~-------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g~~--~~   51 (382)
                      +|||+||||+++                                     || |||||+||++||+||++++.++.+  ++
T Consensus         1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~g~~~~~~   80 (391)
T PRK14284          1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGGFGG   80 (391)
T ss_pred             CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHhccccccccccCCcCC
Confidence            489999999999                                     99 999999999999999987642210  11


Q ss_pred             CCC------------------CCchhhhhcccCCCCCC-CCCCCCccccCCceeEeccccccccccCcceeEEeeceeee
Q 016833           52 GGA------------------HDPFDIFQSFFGGSPFG-GGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVI  112 (382)
Q Consensus        52 ~~~------------------~~~~d~F~~~Fggg~f~-g~~~~~~~~~kg~di~~~l~vtlee~~~G~~~~i~~~r~~~  112 (382)
                      +++                  ..+.|+|++|||+++++ +++....+++++.|+.+.|.|||||+|+|+++++.+++.+.
T Consensus        81 ~g~~~~~~~~~~~~~~f~~~~~~~~d~f~~~fgg~g~~~~~~~~~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r~~~  160 (391)
T PRK14284         81 AGMGNMEDALRTFMGAFGGEFGGGGSFFEGLFGGLGEAFGMRGGPAGARQGASKKVHITLSFEEAAKGVEKELLVSGYKS  160 (391)
T ss_pred             CCcCcccchhhhccccccccccccccchhhhccCccccccccccCCCcCCCCCeEEEEEEEHHHHhCCeeEEEEEeeecc
Confidence            110                  01147888888742110 11111223467899999999999999999999999999999


Q ss_pred             CCCCCCCCccCCCc-ccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCCCceEEEeceEEEEEe
Q 016833          113 CTKCKGKGSKSGAS-MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIV  191 (382)
Q Consensus       113 C~~C~G~G~~~~~~-~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~G~g~~~~~~~l~V~I  191 (382)
                      |+.|+|+|++.+.. .+|+.|+|+|.++..+    |+++ ++.+|+.|+|+|+++.  +.|+.|+|++++.+.++|+|+|
T Consensus       161 C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~----G~~~-~~~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~l~V~I  233 (391)
T PRK14284        161 CDACSGSGANSSQGIKVCDRCKGSGQVVQSR----GFFS-MASTCPECGGEGRVIT--DPCSVCRGQGRIKDKRSVHVHI  233 (391)
T ss_pred             CCCCcccccCCCCCCeecCccCCeeEEEEEe----ceEE-EEEECCCCCCCCcccC--CcCCCCCCcceecceEEEEEEE
Confidence            99999999988764 7899999999877543    4554 6789999999999986  8899999999999999999999


Q ss_pred             ccCCCCCCEEEeCCCCCCCC-CCCCccEEEEEEEecCCccccccccceeeeccCHHHHhCCCEEEEEecC-CcEEEEEeC
Q 016833          192 EKGMQNGQKITFPGEADEAP-DTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLD-GRQLLIKSQ  269 (382)
Q Consensus       192 p~G~~~g~~i~~~geG~~~~-g~~~GDl~v~i~~k~h~~F~R~g~DL~~~~~I~l~eAl~G~~~~i~tld-G~~l~i~~p  269 (382)
                      |||+++|++|+|+|+|++.+ ++.+|||||+|++++|+.|+|+|+||+++++|||.|||+|+++.|+||| |+.+.|+||
T Consensus       234 p~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tld~g~~i~v~Ip  313 (391)
T PRK14284        234 PAGVDSGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAALGMKKEIPTLLKEGTCRLTIP  313 (391)
T ss_pred             CCCCCCCCEEEEeccccCCCCCCCCCCEEEEEEEecCCCceeecCCEEEEEEecHHHHhCCCeEEEeecCCCcEEEEEEC
Confidence            99999999999999999976 5788999999999999999999999999999999999999999999999 677999999


Q ss_pred             CCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHhCC
Q 016833          270 PGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP  324 (382)
Q Consensus       270 ~g~vi~~g~~~~i~g~GmP~~~~~~~~GdL~i~~~V~~P~~l~~~~~~~l~~~lp  324 (382)
                      ++  +++|++++|+|+|||..+. ..+|||||+|+|.+|+.|+++|+++|++|+.
T Consensus       314 ~g--~~~g~~~~i~g~G~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~ll~~l~~  365 (391)
T PRK14284        314 EG--IQSGTILKVRGQGFPNVHG-KGRGDLLVRISVETPQNLSEEQKELLRQFAA  365 (391)
T ss_pred             Cc--cCCCeEEEECCCCCCCCCC-CCCCcEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence            98  8999999999999997643 4689999999999999999999999999985

>TIGR02349 DnaJ_bact chaperone protein DnaJ

Probab=100.00  E-value=5.1e-69  Score=533.31  Aligned_cols=305  Identities=35%  Similarity=0.676  Sum_probs=270.2

Q ss_pred             chhhhcCCCCC------------------------------------ce-eccCccccccccccchhhhhCCCCC-CC--
Q 016833           13 KYYEILGVSKK------------------------------------RF-VLSDPEKREIYDQYGEDALKEGMGG-GG--   52 (382)
Q Consensus        13 ~~Y~iLgv~~~------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g~~~-~~--   52 (382)
                      |||+||||+++                                    || ||||+.||+.||+||+++++++.++ ++  
T Consensus         1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~~~~~~~~~~~~~   80 (354)
T TIGR02349         1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGGGF   80 (354)
T ss_pred             ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhhChHHHHhhhhcccccccccCcCCCCCc
Confidence            79999999988                                    99 9999999999999999887642111 11  


Q ss_pred             ------CCCCchhhhhcccCCCCCCCCCCCCccccCCceeEeccccccccccCcceeEEeeceeeeCCCCCCCCccCCCc
Q 016833           53 ------GAHDPFDIFQSFFGGSPFGGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGAS  126 (382)
Q Consensus        53 ------~~~~~~d~F~~~Fggg~f~g~~~~~~~~~kg~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~  126 (382)
                            ++.++.|+|++|||++. +++..+...++++.|+.+.|.|||||+|+|+++++.+++.+.|+.|+|+|......
T Consensus        81 ~~~~~~~~~~~~~~f~~~fg~~~-g~~~~~~~~~~~~~d~~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~  159 (354)
T TIGR02349        81 NGFDIGFFGDFGDIFGDFFGGGG-GSGRRRRSGPRRGEDLRYDLELTFEEAVFGVEKEIEIPRKESCETCHGTGAKPGTD  159 (354)
T ss_pred             CCccccCcCchhhhHHHHhccCc-ccCccccCCCCCCCCeEEEEEEEHHHHhCCeeEEEEeecCCcCCCCCCCCCCCCCC
Confidence                  12346689999998421 11111123456799999999999999999999999999999999999999987764


Q ss_pred             -ccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCCCceEEEeceEEEEEeccCCCCCCEEEeCC
Q 016833          127 -MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG  205 (382)
Q Consensus       127 -~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G~~~g~~i~~~g  205 (382)
                       .+|+.|+|+|.++..+++||||+|+ +.+|+.|.|+|+++.  +.|+.|+|++++.+.+.++|.||||+++|++|+|+|
T Consensus       160 ~~~C~~C~G~G~~~~~~~~~~g~~~~-~~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g  236 (354)
T TIGR02349       160 PKTCPTCGGTGQVRRQQGTPFGFFQQ-QQTCPTCGGEGKIIK--EPCSTCKGKGRVKERKTITVKIPAGVDTGQRLRVSG  236 (354)
T ss_pred             CccCCCCCCeeEEEEEEeccCCceEE-EEecCCCCCcceecC--CCCCCCCCCcEecccceEEEEECCCCCCCCEEEEec
Confidence             7899999999999999999999987 679999999999986  789999999999999999999999999999999999


Q ss_pred             CCCCC-CCCCCccEEEEEEEecCCccccccccceeeeccCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEEEEcC
Q 016833          206 EADEA-PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAIND  284 (382)
Q Consensus       206 eG~~~-~g~~~GDl~v~i~~k~h~~F~R~g~DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~i~g  284 (382)
                      +|++. ++..+|||||+|++++|+.|+|+|+||++++.|||.|||+|+++.|+|||| .+.|.+|++  +++|++++|+|
T Consensus       237 ~G~~~~~~~~~GDl~v~i~v~~h~~f~r~g~DL~~~~~isl~eAl~G~~~~i~~ldG-~i~v~ip~g--~~~g~~~~i~g  313 (354)
T TIGR02349       237 KGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTLDG-DVKLKIPAG--TQSGTVFRLKG  313 (354)
T ss_pred             CccCCCCCCCCCCEEEEEEEecCcceEEecCCEEEEEEeCHHHHhCCCeEEEecCCc-eEEEEECCc--ccCCcEEEECC
Confidence            99984 466789999999999999999999999999999999999999999999999 589999998  79999999999


Q ss_pred             CCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHhCCC
Q 016833          285 EGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPP  325 (382)
Q Consensus       285 ~GmP~~~~~~~~GdL~i~~~V~~P~~l~~~~~~~l~~~lp~  325 (382)
                      +|||..+. ..+|||||+|+|.||+.|+++|+++|++||..
T Consensus       314 ~G~p~~~~-~~~GDL~i~~~v~~P~~l~~~~~~~l~~~~~~  353 (354)
T TIGR02349       314 KGVPRLRG-NGRGDLLVTVKVETPKNLSKEQKELLEELAEA  353 (354)
T ss_pred             CCcCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence            99997643 36899999999999999999999999999853

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.

>PRK14301 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=7.1e-69  Score=534.49  Aligned_cols=302  Identities=31%  Similarity=0.594  Sum_probs=263.1

Q ss_pred             CcchhhhcCCCCC-------------------------------------ce-eccCccccccccccchhhhhCCCC-CC
Q 016833           11 NTKYYEILGVSKK-------------------------------------RF-VLSDPEKREIYDQYGEDALKEGMG-GG   51 (382)
Q Consensus        11 ~~~~Y~iLgv~~~-------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g~~-~~   51 (382)
                      .+|||+||||+++                                     || |||||+||+.||+||+++++++.+ ++
T Consensus         3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g~~~~~~~~g   82 (373)
T PRK14301          3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGNGGFGG   82 (373)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCChHHHHHHHHHHHHHHHhcchhhhhhhhhccccccccCCCCCC
Confidence            5799999999998                                     99 999999999999999988764211 11


Q ss_pred             C-C----CCCchhhhhcccCCCCCCCCCCCCccccCCceeEeccccccccccCcceeEEeeceeeeCCCCCCCCccCCCc
Q 016833           52 G-G----AHDPFDIFQSFFGGSPFGGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGAS  126 (382)
Q Consensus        52 ~-~----~~~~~d~F~~~Fggg~f~g~~~~~~~~~kg~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~  126 (382)
                      . +    +.++.|+|++|||+++.  ++.+..++.++.|+.+.|.|||||+|+|+++++.+++.+.|+.|+|+|......
T Consensus        83 ~~~~~~~~~~f~d~f~~~fg~g~~--~~~~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~  160 (373)
T PRK14301         83 FSSAEDIFSHFSDIFGDLFGFSGG--GSRRGPRPQAGSDLRYNLTVSFRQAAKGDEVTLRIPKNVTCDDCGGSGAAPGTS  160 (373)
T ss_pred             cccccccccchHHHHHHHhhccCc--ccccCCCCCCCCCEEEEEeccHHHHhCCceEEEEeeecccCCCCCCcccCCCCC
Confidence            1 1    12345788888863211  111223456899999999999999999999999999999999999999987764


Q ss_pred             -ccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCCCceEEEeceEEEEEeccCCCCCCEEEeCC
Q 016833          127 -MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG  205 (382)
Q Consensus       127 -~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G~~~g~~i~~~g  205 (382)
                       .+|+.|+|+|.+...  .  ||+ +++.+|+.|+|+|+++.  +.|+.|+|++++.+.++++|+||+|+++|++|+|+|
T Consensus       161 ~~~C~~C~G~G~v~~~--~--G~~-~~~~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g  233 (373)
T PRK14301        161 PETCRHCGGSGQVRQS--Q--GFF-QIAVPCPVCRGEGRVIT--HPCPKCKGSGIVQQTRELKVRIPAGVDTGSRLRLRG  233 (373)
T ss_pred             CcccCCccCeeEEEEE--e--eeE-EEEEeCCCCCceeeecC--CCCCCCCCCceeccceEEEEEeCCCCcCCCEEEEec
Confidence             789999999987643  3  455 45999999999999986  889999999999999999999999999999999999


Q ss_pred             CCCCCC-CCCCccEEEEEEEecCCccccccccceeeeccCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEEEEcC
Q 016833          206 EADEAP-DTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAIND  284 (382)
Q Consensus       206 eG~~~~-g~~~GDl~v~i~~k~h~~F~R~g~DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~i~g  284 (382)
                      +|++.+ +..+|||||+|++++|+.|+|+|+||+++++|+|.+||+|+++.|+||||+ +.|+||++  +++|++++|+|
T Consensus       234 ~G~~~~~~~~~GDLiv~i~v~~h~~f~r~G~DL~~~~~Isl~eAl~G~~~~v~tldG~-i~v~ip~g--~~~g~~~ri~g  310 (373)
T PRK14301        234 EGEPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDDP-VTLDIPKG--TQSGEVFRLRG  310 (373)
T ss_pred             cccCCCCCCCCcCEEEEEEEEECCCceeecCcEEEEEEecHHHHhCCCeEEEecCCcc-EEEEECCC--cCCCcEEEEcC
Confidence            999865 577899999999999999999999999999999999999999999999998 89999998  79999999999


Q ss_pred             CCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHhCCC
Q 016833          285 EGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPP  325 (382)
Q Consensus       285 ~GmP~~~~~~~~GdL~i~~~V~~P~~l~~~~~~~l~~~lp~  325 (382)
                      +|||..+ ...+|||||+|+|.||+.|+++|+++|++|+..
T Consensus       311 ~G~p~~~-~~~~GDL~I~~~V~~P~~l~~~q~~~l~~l~~~  350 (373)
T PRK14301        311 KGLPYLG-SSQKGDLLVEVSVVTPTKLTKRQEELLREFEAL  350 (373)
T ss_pred             CCCCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence            9999764 346899999999999999999999999999853

>PRK14295 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.5e-68  Score=534.45  Aligned_cols=304  Identities=31%  Similarity=0.604  Sum_probs=262.9

Q ss_pred             CCCCCCCcchhhhcCCCCC-------------------------------------ce-eccCccccccccc----cchh
Q 016833            5 APKKSDNTKYYEILGVSKK-------------------------------------RF-VLSDPEKREIYDQ----YGED   42 (382)
Q Consensus         5 ~~~~~~~~~~Y~iLgv~~~-------------------------------------AY-vLsD~~KR~~YD~----~G~~   42 (382)
                      +.+|++.+|||+||||+++                                     || |||||+||++||+    ||++
T Consensus         2 ~~~~~~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~   81 (389)
T PRK14295          2 STKDYIEKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNG   81 (389)
T ss_pred             CchhccccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhccc
Confidence            4567778999999999999                                     99 9999999999999    9998


Q ss_pred             hhhCCCC-C-CCCC-CC--------------------chhhhhcccCCCCCCCCCCCCccccCCceeEeccccccccccC
Q 016833           43 ALKEGMG-G-GGGA-HD--------------------PFDIFQSFFGGSPFGGGSSRGRRQRRGEDVIHPLKVSLEDLYN   99 (382)
Q Consensus        43 g~~~g~~-~-~~~~-~~--------------------~~d~F~~~Fggg~f~g~~~~~~~~~kg~di~~~l~vtlee~~~   99 (382)
                      +++++.+ + ++++ ++                    +.|+|+.|||+     ++ +.++++++.|+.+.|.|||||+|+
T Consensus        82 g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~f~d~f~~~fg~-----~~-~~~~~~~g~di~~~l~lsLee~~~  155 (389)
T PRK14295         82 GFRPGPGGGGGGGFNFDLGDLFGGGAQGGGGAGGGGGLGDVFGGLFNR-----GG-RRTQPRRGADVESEVTLSFTEAID  155 (389)
T ss_pred             ccccCCCCCCCCCCCcccccccccccccccccccccchhhhhcccccC-----CC-CCCCCCCCCCEEEEEEEEHHHHhC
Confidence            8753211 0 0000 11                    23445555542     11 122346799999999999999999


Q ss_pred             cceeEEeeceeeeCCCCCCCCccCCCc-ccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCCCc
Q 016833          100 GTSKKLSLSRNVICTKCKGKGSKSGAS-MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGE  178 (382)
Q Consensus       100 G~~~~i~~~r~~~C~~C~G~G~~~~~~-~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~G~  178 (382)
                      |++++|.+++.+.|+.|+|+|.+.+.. .+|+.|+|+|.++..+  |  ++ +++.+|+.|+|+|+++.  +.|..|+|+
T Consensus       156 G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~--g--~~-~~~~~C~~C~G~G~~~~--~~C~~C~G~  228 (389)
T PRK14295        156 GATVPLRLTSQAPCPACSGTGAKNGTTPRVCPTCSGTGQVSRNS--G--GF-SLSEPCPDCKGRGLIAD--DPCLVCKGS  228 (389)
T ss_pred             CceEEEEeeccccCCCCcccccCCCCCCcCCCCCCCEeEEEEEe--c--ce-EEEEecCCCcceeEEec--cCCCCCCCC
Confidence            999999999999999999999998764 7899999999987654  3  33 46789999999999986  889999999


Q ss_pred             eEEEeceEEEEEeccCCCCCCEEEeCCCCCCCC-CCCCccEEEEEEEecCCccccccccceeeeccCHHHHhCCCEEEEE
Q 016833          179 KVIQEKKVLEVIVEKGMQNGQKITFPGEADEAP-DTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVIT  257 (382)
Q Consensus       179 g~~~~~~~l~V~Ip~G~~~g~~i~~~geG~~~~-g~~~GDl~v~i~~k~h~~F~R~g~DL~~~~~I~l~eAl~G~~~~i~  257 (382)
                      +++.+.++++|.||+|+++|++|+|+|+|++.+ +..+|||||+|++++|+.|+|+|+||+++++|||.+||+|+++.|+
T Consensus       229 g~~~~~~~l~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~  308 (389)
T PRK14295        229 GRAKSSRTMQVRIPAGVSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGAEVRVP  308 (389)
T ss_pred             ceEeeeeEEEEEeCCCCCCCCEEEEcccccCCCCCCCCccEEEEEEEecCCCEEEecCCEEEEEeecHHHHhCCCeEEEE
Confidence            999999999999999999999999999999854 6678999999999999999999999999999999999999999999


Q ss_pred             ecCCcEEEEEeCCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHhCCC
Q 016833          258 HLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPP  325 (382)
Q Consensus       258 tldG~~l~i~~p~g~vi~~g~~~~i~g~GmP~~~~~~~~GdL~i~~~V~~P~~l~~~~~~~l~~~lp~  325 (382)
                      ||||+.+.|+||++  +++|++++|+|+|||..  ...+|||||+|+|.||++|+++|+++|++++..
T Consensus       309 tldG~~~~v~ip~g--~~~g~~iri~G~G~p~~--~~~~GDL~i~~~v~~P~~Ls~~qk~~l~~l~~~  372 (389)
T PRK14295        309 TLGGPPVTVKLPPG--TPNGRVLRVRGKGAVRK--DGTRGDLLVTVEVAVPKDLSGKAREALEAFREA  372 (389)
T ss_pred             CCCCCEEEEEECCc--cCCCcEEEECCCCcCCC--CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence            99999899999998  79999999999999964  346899999999999999999999999999863

>PRK14294 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2e-68  Score=530.49  Aligned_cols=304  Identities=29%  Similarity=0.544  Sum_probs=264.2

Q ss_pred             CCcchhhhcCCCCC-------------------------------------ce-eccCccccccccccchhhhhCCCCCC
Q 016833           10 DNTKYYEILGVSKK-------------------------------------RF-VLSDPEKREIYDQYGEDALKEGMGGG   51 (382)
Q Consensus        10 ~~~~~Y~iLgv~~~-------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g~~~~   51 (382)
                      ..+|||+||||+++                                     || |||||+||++||+||+++++++..++
T Consensus         2 ~~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g~~~~~~~~   81 (366)
T PRK14294          2 VKRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGTGFSG   81 (366)
T ss_pred             CCCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHhhccccccCCCCCC
Confidence            35799999999998                                     99 99999999999999998876421111


Q ss_pred             -CC----CCCchhhhhcccCCCCCCCCCCCCccccCCceeEeccccccccccCcceeEEeeceeeeCCCCCCCCccCCCc
Q 016833           52 -GG----AHDPFDIFQSFFGGSPFGGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGAS  126 (382)
Q Consensus        52 -~~----~~~~~d~F~~~Fggg~f~g~~~~~~~~~kg~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~  126 (382)
                       ++    +.++.|+|++|||.+++ ++++....+.++.|+.+.|.|||||+|+|+++++.+++.+.|+.|+|+|......
T Consensus        82 ~~~~~~~~~~~~d~f~~~fg~g~~-~~~~~~~~~~~g~d~~~~l~lslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~  160 (366)
T PRK14294         82 FSGFDDIFSSFGDIFEDFFGFGGG-RRGRSRTAVRAGADLRYDLTLPFLEAAFGTEKEIRIQKLETCEECHGSGCEPGTS  160 (366)
T ss_pred             cCccccchhhhhhhHHHhhccCCC-cCCcccCCCCCCCCceEEEEeeHHHhcCCeEEEEEeeecccCCCCCCccccCCCC
Confidence             11    12356899999972111 1111112346799999999999999999999999999999999999999987764


Q ss_pred             -ccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCCCceEEEeceEEEEEeccCCCCCCEEEeCC
Q 016833          127 -MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG  205 (382)
Q Consensus       127 -~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G~~~g~~i~~~g  205 (382)
                       .+|+.|+|+|.++..  .  ||+ |++.+|+.|+|+|+++.  +.|+.|+|++++.+.+.++|.||||+++|++|+|+|
T Consensus       161 ~~~C~~C~G~G~~~~~--~--G~~-~~~~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g  233 (366)
T PRK14294        161 PTTCPQCGGSGQVTQS--Q--GFF-SIRTTCPRCRGMGKVIV--SPCKTCHGQGRVRVSKTVQVKIPAGVDTGSRLRLRG  233 (366)
T ss_pred             cccCCCcCCeEEEEEE--e--eeE-EEEeeCCCCCCcCeecC--cCCCCCCCceEeecceeEEEecCCCCcCCcEEEEcc
Confidence             789999999988643  3  466 47899999999999986  889999999999999999999999999999999999


Q ss_pred             CCCCC-CCCCCccEEEEEEEecCCccccccccceeeeccCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEEEEcC
Q 016833          206 EADEA-PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAIND  284 (382)
Q Consensus       206 eG~~~-~g~~~GDl~v~i~~k~h~~F~R~g~DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~i~g  284 (382)
                      +|++. ++..+|||||+|++++|+.|+|+|+||++++.|||.|||+|+++.|+||||+ +.|.||+|  +++|++++|+|
T Consensus       234 ~G~~~~~~~~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~-~~v~ip~g--~~~g~~iri~G  310 (366)
T PRK14294        234 EGEAGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTLEGE-RELKIPKG--TQPGDIFRFKG  310 (366)
T ss_pred             CccCCCCCCCCCcEEEEEEEccCCcceecCCCEEEEEEeCHHHHhCCCeEEEECCCCc-EEEEECCC--cCCCCEEEECC
Confidence            99985 4678999999999999999999999999999999999999999999999997 68999998  79999999999


Q ss_pred             CCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHhCCC
Q 016833          285 EGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPP  325 (382)
Q Consensus       285 ~GmP~~~~~~~~GdL~i~~~V~~P~~l~~~~~~~l~~~lp~  325 (382)
                      +|||..+. ..+|||||+|+|.+|+.|+++++++|++|+..
T Consensus       311 ~G~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~ll~~~~~~  350 (366)
T PRK14294        311 KGIPSLRG-GGRGDQIIEVEVKVPTRLTKKQEELLTEFARL  350 (366)
T ss_pred             CCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHh
Confidence            99997643 36899999999999999999999999999953

>PRK14290 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1e-67  Score=525.24  Aligned_cols=308  Identities=29%  Similarity=0.586  Sum_probs=267.2

Q ss_pred             cchhhhcCCCCC--------------------------------------ce-eccCccccccccccchhhhhCCCCC-C
Q 016833           12 TKYYEILGVSKK--------------------------------------RF-VLSDPEKREIYDQYGEDALKEGMGG-G   51 (382)
Q Consensus        12 ~~~Y~iLgv~~~--------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g~~~-~   51 (382)
                      +|||+||||+++                                      || |||||+||++||+||+++++++.++ +
T Consensus         3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~~~~~~~~~~~   82 (365)
T PRK14290          3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGAGGSNFN   82 (365)
T ss_pred             CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccCCcccccCCCCcc
Confidence            699999999999                                      99 9999999999999999877532111 0


Q ss_pred             -C---CCCCchhhhhcccCCCC----CCCCCCCCccccCCceeEeccccccccccCcceeEEeeceeeeCCCCCCCCccC
Q 016833           52 -G---GAHDPFDIFQSFFGGSP----FGGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKS  123 (382)
Q Consensus        52 -~---~~~~~~d~F~~~Fggg~----f~g~~~~~~~~~kg~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~  123 (382)
                       +   ++.++.|+|+.|||++.    +++.++..+.++++.|+.+.|.|||+|+|+|+++++.+.+.+.|+.|+|+|...
T Consensus        83 ~~~~~~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~di~~~l~lsLee~~~G~~~~i~~~r~~~C~~C~G~g~~~  162 (365)
T PRK14290         83 WDNFTHFSDINDIFNQIFGGNFGSDFFSGFGNQQSTRNIDLDIYTNLDISLEDAYYGTEKRIKYRRNAMCPDCSGTGAKN  162 (365)
T ss_pred             ccccccccchhHHHHHHhcCccccccccccccccCCCCCCCCEEEEEEecHHHhcCCEEEEEEeeecccCCCCccccCCC
Confidence             0   12467799999998421    011011111223588999999999999999999999999999999999999987


Q ss_pred             CCcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCCCceEEEeceEEEEEeccCCCCCCEEEe
Q 016833          124 GASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITF  203 (382)
Q Consensus       124 ~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G~~~g~~i~~  203 (382)
                      ....+|+.|+|+|++...++.|+ +.++.+.+|+.|.|+|+++.  +.|+.|+|++++.+.+.++|.||||+.+|++|+|
T Consensus       163 ~~~~~C~~C~G~G~~~~~~~~g~-~~~~~~~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~  239 (365)
T PRK14290        163 GKLITCPTCHGTGQQRIVRGQGF-FRMVTVTTCRTCGGRGRIPE--EKCPRCNGTGTVVVNEDISVKIPKGATDNLRLRV  239 (365)
T ss_pred             CCCccCCCCCCcCEEEEEeccCe-EEEEEEEeCCCCCCceeEcc--CCCCCCCCceeEEEeeEEEEEECCCCCCCcEEEE
Confidence            76689999999999887775444 44667899999999999976  8999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCccEEEEEEEecCCccccccccceeeeccCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEEEEc
Q 016833          204 PGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAIN  283 (382)
Q Consensus       204 ~geG~~~~g~~~GDl~v~i~~k~h~~F~R~g~DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~i~  283 (382)
                      +|+|++ +++.+|||||+|++++|+.|+|+|+||+++++|||.|||+|+++.|+|++|+ +.|+||++  +++|++++|+
T Consensus       240 ~g~G~~-~~~~~GDL~v~v~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~~~~g~-i~V~Ip~g--~~~g~~iri~  315 (365)
T PRK14290        240 KGKGQS-YGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEIEIKLFREK-YNLKIPEG--TQPGEVLKIK  315 (365)
T ss_pred             ccccCC-CCCCCCCEEEEEEEcCCCCEEEecCCEEEEEEeCHHHHhCCCEEEEEcCCce-EEEEECCc--cCCCcEEEEC
Confidence            999996 7889999999999999999999999999999999999999999999999996 89999998  8999999999


Q ss_pred             CCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHhCCCCC
Q 016833          284 DEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPRT  327 (382)
Q Consensus       284 g~GmP~~~~~~~~GdL~i~~~V~~P~~l~~~~~~~l~~~lp~~~  327 (382)
                      |+|||..+. ..+|||||+|+|.+|+.|+++++++|+++|+.+.
T Consensus       316 g~G~p~~~~-~~~GDL~V~~~V~~P~~l~~~~~~ll~~~~~~~~  358 (365)
T PRK14290        316 GAGMPHLNG-HGSGDLLVRINVEVPKRLTSKQKELIREFFDIKE  358 (365)
T ss_pred             CCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHhhh
Confidence            999997543 3589999999999999999999999999997554

>PRK14293 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.9e-67  Score=523.58  Aligned_cols=309  Identities=32%  Similarity=0.616  Sum_probs=270.9

Q ss_pred             CcchhhhcCCCCC------------------------------------ce-eccCccccccccccchhhhhCCCC-CC-
Q 016833           11 NTKYYEILGVSKK------------------------------------RF-VLSDPEKREIYDQYGEDALKEGMG-GG-   51 (382)
Q Consensus        11 ~~~~Y~iLgv~~~------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g~~-~~-   51 (382)
                      ..|||+||||+++                                    || |||||+||++||+||+++++++.+ ++ 
T Consensus         2 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~g~~~~~~~~~~   81 (374)
T PRK14293          2 AADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGAAGFPDM   81 (374)
T ss_pred             CCChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHHHHhchHHHHHHhhccccccccCCCcCCc
Confidence            4699999999998                                    99 999999999999999988763211 11 


Q ss_pred             CCCCCchhhhhcccCCCC-CCC-C-CCCCccccCCceeEeccccccccccCcceeEEeeceeeeCCCCCCCCccCCCc-c
Q 016833           52 GGAHDPFDIFQSFFGGSP-FGG-G-SSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGAS-M  127 (382)
Q Consensus        52 ~~~~~~~d~F~~~Fggg~-f~g-~-~~~~~~~~kg~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~-~  127 (382)
                      ++..++.|+|++|||+.+ +++ + +.+.+++.++.|+.+.|.|||||+|+|+++++++++.++|+.|+|+|...... .
T Consensus        82 ~~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~kg~di~~~l~vsLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~  161 (374)
T PRK14293         82 GDMGGFADIFETFFSGFGGAGGQGGRRRRRGPQRGDDLRYDLKLDFREAIFGGEKEIRIPHLETCETCRGSGAKPGTGPT  161 (374)
T ss_pred             ccccchHHHHHHHhcccCCCCCCCccccccCccCCCCeEEEEEeeHHHHhCCceEEEEeeccccCCCCCCcCCCCCCCCe
Confidence            112245689999997411 110 0 01122345789999999999999999999999999999999999999987764 7


Q ss_pred             cCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCCCceEEEeceEEEEEeccCCCCCCEEEeCCCC
Q 016833          128 KCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEA  207 (382)
Q Consensus       128 ~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G~~~g~~i~~~geG  207 (382)
                      +|+.|+|+|++...++++||++++ +.+|+.|.|+|+++.  +.|+.|+|++++.+.+.++|.||||+++|++|+|+|+|
T Consensus       162 ~C~~C~G~G~~~~~~~~~~g~~~~-~~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~~~V~IppG~~~G~~i~l~g~G  238 (374)
T PRK14293        162 TCSTCGGAGQVRRATRTPFGSFTQ-VSECPTCNGTGQVIE--DPCDACGGQGVKQVTKKLKINIPAGVDTGTRLRVSGEG  238 (374)
T ss_pred             eCCCCCCcceEEEEEecCcceEEE-EeeCCCCCcceeEec--cCCCCCCCCcccccceEEEEEeCCCCCCCCEEEEccCc
Confidence            899999999999999999999886 689999999999976  88999999999999999999999999999999999999


Q ss_pred             CCC-CCCCCccEEEEEEEecCCccccccccceeeeccCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEEEEcCCC
Q 016833          208 DEA-PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEG  286 (382)
Q Consensus       208 ~~~-~g~~~GDl~v~i~~k~h~~F~R~g~DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~i~g~G  286 (382)
                      ++. ++..+|||||+|++++|+.|+|+|+||+++++|+|.|||+|+++.|+||||+ +.|++|++  +++|++++|+|+|
T Consensus       239 ~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldG~-~~i~ip~~--~~~g~~~ri~g~G  315 (374)
T PRK14293        239 DAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVDGP-VELTIPAG--TQPNTVLTLENKG  315 (374)
T ss_pred             cCCCCCCCCcCEEEEEEEeCCCccChhhhceEEEeccCHHHHhCCCEEEecCCCCC-EEEEeCCC--CCCCCEEEECCCC
Confidence            985 4567899999999999999999999999999999999999999999999997 78999997  7999999999999


Q ss_pred             CCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHhCCC
Q 016833          287 MPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPP  325 (382)
Q Consensus       287 mP~~~~~~~~GdL~i~~~V~~P~~l~~~~~~~l~~~lp~  325 (382)
                      ||..+.+..+|||||+|+|.||+.|+++++++|++|+..
T Consensus       316 ~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~l~~~l~~~  354 (374)
T PRK14293        316 VPRLGNPVARGDHLITVKVKIPTRISDEERELLEKLAKI  354 (374)
T ss_pred             CCCCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence            998655456899999999999999999999999999964

>PRK10767 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=3e-67  Score=523.37  Aligned_cols=300  Identities=35%  Similarity=0.700  Sum_probs=261.9

Q ss_pred             CcchhhhcCCCCC-------------------------------------ce-eccCccccccccccchhhhhCCCC-CC
Q 016833           11 NTKYYEILGVSKK-------------------------------------RF-VLSDPEKREIYDQYGEDALKEGMG-GG   51 (382)
Q Consensus        11 ~~~~Y~iLgv~~~-------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g~~-~~   51 (382)
                      .+|||+||||+++                                     || |||||+||+.||+||++++..+.+ ++
T Consensus         3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~   82 (371)
T PRK10767          3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGGGGGG   82 (371)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHHHHHHHHHHhcchhhhhHhhhccccccccCCCCCC
Confidence            5799999999999                                     99 999999999999999988763211 11


Q ss_pred             -C---CCCC-chhhhhcccCCCCCCCCCCCCccccCCceeEeccccccccccCcceeEEeeceeeeCCCCCCCCccCCCc
Q 016833           52 -G---GAHD-PFDIFQSFFGGSPFGGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGAS  126 (382)
Q Consensus        52 -~---~~~~-~~d~F~~~Fggg~f~g~~~~~~~~~kg~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~  126 (382)
                       +   ++.+ +.|+|+.|||+++   + ++.++++++.|+.+.|.|||||+|+|+++++.+++.+.|+.|+|+|...+..
T Consensus        83 ~~~~~~~~~~f~~~f~~~fgg~~---~-~~~~~~~~g~di~~~l~vsLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~  158 (371)
T PRK10767         83 FGGGGGFGDIFGDIFGDIFGGGR---G-GGRQRARRGADLRYNMEITLEEAVRGVTKEIRIPTLVTCDTCHGSGAKPGTS  158 (371)
T ss_pred             CCCccccccchhhhhhhhccCCc---c-ccCCCCCCCCCeEEEEEeehHHhhCCeeEEEeeeecccCCCCCCcccCCCCC
Confidence             1   1123 4467777776321   1 1123356899999999999999999999999999999999999999988764


Q ss_pred             -ccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCCCceEEEeceEEEEEeccCCCCCCEEEeCC
Q 016833          127 -MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG  205 (382)
Q Consensus       127 -~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G~~~g~~i~~~g  205 (382)
                       ..|+.|+|+|+++..+    ||++ ++.+|+.|+|+|+++.  +.|+.|+|++++.+.+.++|.||||+++|++|+|+|
T Consensus       159 ~~~C~~C~G~G~~~~~~----g~~~-~~~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g  231 (371)
T PRK10767        159 PKTCPTCHGAGQVRMQQ----GFFT-VQQTCPTCHGRGKIIK--DPCKKCHGQGRVEKEKTLSVKIPAGVDTGDRIRLSG  231 (371)
T ss_pred             CccCCCCCCeeEEEEee----ceEE-EEEeCCCCCCceeECC--CCCCCCCCCceEeeeeeEEEecCCCCCCCcEEEEec
Confidence             7899999999876543    4664 7789999999999986  889999999999999999999999999999999999


Q ss_pred             CCCCC-CCCCCccEEEEEEEecCCccccccccceeeeccCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEEEEcC
Q 016833          206 EADEA-PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAIND  284 (382)
Q Consensus       206 eG~~~-~g~~~GDl~v~i~~k~h~~F~R~g~DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~i~g  284 (382)
                      +|++. ++..+|||||+|++++|+.|+|+|+||++++.|+|.+||+|+++.|+||||. +.|++|++  +++|++++|+|
T Consensus       232 ~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~-i~v~ip~g--~~~g~~~~i~g  308 (371)
T PRK10767        232 EGEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLDGR-VKLKIPEG--TQTGKLFRLRG  308 (371)
T ss_pred             CccCCCCCCCCcCEEEEEEEeeCCCEEEecCCEEEEEEeCHHHHhCCCeEEEecCCCc-EEEEeCCC--CCCCCEEEECC
Confidence            99984 5678999999999999999999999999999999999999999999999994 89999998  79999999999


Q ss_pred             CCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHhCCC
Q 016833          285 EGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPP  325 (382)
Q Consensus       285 ~GmP~~~~~~~~GdL~i~~~V~~P~~l~~~~~~~l~~~lp~  325 (382)
                      +|||..+ ...+|||||+|+|.||+.|+++++++|++++..
T Consensus       309 ~G~p~~~-~~~~GDL~v~~~v~~P~~l~~~~~~ll~~l~~~  348 (371)
T PRK10767        309 KGVKSVR-SGARGDLYCQVVVETPVNLTKRQKELLEEFEES  348 (371)
T ss_pred             CCcCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence            9999764 346899999999999999999999999999963

>PRK14300 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=3.7e-67  Score=522.26  Aligned_cols=302  Identities=30%  Similarity=0.625  Sum_probs=261.0

Q ss_pred             cchhhhcCCCCC------------------------------------ce-eccCccccccccccchhhhhCCC--C--C
Q 016833           12 TKYYEILGVSKK------------------------------------RF-VLSDPEKREIYDQYGEDALKEGM--G--G   50 (382)
Q Consensus        12 ~~~Y~iLgv~~~------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g~--~--~   50 (382)
                      +|||+||||+++                                    || ||+|+.||+.||+||++++.++.  +  +
T Consensus         3 ~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~~~g   82 (372)
T PRK14300          3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQSRGGGG   82 (372)
T ss_pred             CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhhhHhHhhHHHhccccccccccccCCCC
Confidence            799999999999                                    99 99999999999999998876321  1  1


Q ss_pred             C-CCC-CCchhhhhcccCCCCCCCCCC-CC-ccccCCceeEeccccccccccCcceeEEeeceeeeCCCCCCCCccCCCc
Q 016833           51 G-GGA-HDPFDIFQSFFGGSPFGGGSS-RG-RRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGAS  126 (382)
Q Consensus        51 ~-~~~-~~~~d~F~~~Fggg~f~g~~~-~~-~~~~kg~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~  126 (382)
                      + +++ .++.++|+.||++. |++++. .+ ..+.++.|+.+.|.|||+|+|+|+++++.+.+.+.|+.|+|+|...+..
T Consensus        83 ~~~~~~~~~~~~f~~~f~~~-~gg~~~~~~~~~~~~g~di~~~l~~sLee~~~G~~k~i~~~r~~~C~~C~G~g~~~~~~  161 (372)
T PRK14300         83 NHGGFHPDINDIFGDFFSDF-MGGSRRSRPTSSKVRGSDLKYNLTINLEEAFHGIEKNISFSSEVKCDTCHGSGSEKGET  161 (372)
T ss_pred             CCCccccchhhhHHHHHHhh-cCCCCCCCCCcCCCCCCCeeEEEEEEHHHHhCCceEEEEeeeccccCCCCCcccCCCCC
Confidence            1 111 13445666666421 111111 11 1235789999999999999999999999999999999999999988764


Q ss_pred             -ccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCCCceEEEeceEEEEEeccCCCCCCEEEeCC
Q 016833          127 -MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG  205 (382)
Q Consensus       127 -~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G~~~g~~i~~~g  205 (382)
                       .+|+.|+|+|.++..    +||++ ++.+|+.|+|+|+++.  +.|+.|+|++++.+.+.++|.||||+++|++|+|+|
T Consensus       162 ~~~C~~C~G~G~~~~~----~g~~~-~~~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~l~g  234 (372)
T PRK14300        162 VTTCDACSGVGATRMQ----QGFFT-IEQACHKCQGNGQIIK--NPCKKCHGMGRYHKQRNLSVNIPAGVENGTRIRHTG  234 (372)
T ss_pred             CccCCCccCeEEEEEe----eceEE-EEEeCCCCCccceEeC--CCCCCCCCceEEEeeEEEEEEECCCCCCCcEEEEec
Confidence             799999999987642    25665 7889999999999986  889999999999999999999999999999999999


Q ss_pred             CCCCC-CCCCCccEEEEEEEecCCccccccccceeeeccCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEEEEcC
Q 016833          206 EADEA-PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAIND  284 (382)
Q Consensus       206 eG~~~-~g~~~GDl~v~i~~k~h~~F~R~g~DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~i~g  284 (382)
                      +|++. ++..+|||||+|++++|+.|+|+|+||++++.|+|.+||+|+++.|+||||+.|.|+||+|  +++|++++|+|
T Consensus       235 ~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~Dl~~~~~Isl~~Al~G~~~~i~~ldg~~i~v~Ip~g--~~~g~~iri~g  312 (372)
T PRK14300        235 EGEAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIEGGKVNLTIPAG--TQNGDQLRLRS  312 (372)
T ss_pred             cccCCCCCCCCCCEEEEEEECCCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCCCEEEEEECCc--cCCCcEEEECC
Confidence            99985 5678999999999999999999999999999999999999999999999998899999998  79999999999


Q ss_pred             CCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHhCC
Q 016833          285 EGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP  324 (382)
Q Consensus       285 ~GmP~~~~~~~~GdL~i~~~V~~P~~l~~~~~~~l~~~lp  324 (382)
                      +|||..+ ...+|||||+|+|.||++||++|+++|++|+.
T Consensus       313 ~G~p~~~-~~~~GDL~V~~~v~~P~~ls~~qk~~l~~l~~  351 (372)
T PRK14300        313 KGMSKMR-STIRGDMLTHIHVEVPKNLSKRQRELLEEFKK  351 (372)
T ss_pred             CCCCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence            9999753 34689999999999999999999999999985

>PRK14283 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=8.7e-67  Score=520.86  Aligned_cols=303  Identities=28%  Similarity=0.583  Sum_probs=265.3

Q ss_pred             CCCCcchhhhcCCCCC------------------------------------ce-eccCccccccccccchhhhhCCCCC
Q 016833            8 KSDNTKYYEILGVSKK------------------------------------RF-VLSDPEKREIYDQYGEDALKEGMGG   50 (382)
Q Consensus         8 ~~~~~~~Y~iLgv~~~------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g~~~   50 (382)
                      ||.++|||++|||+++                                    || |||||+||++||+||++++++....
T Consensus         1 ~~~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~g~~~~~~~   80 (378)
T PRK14283          1 MAEKRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMDGFSQE   80 (378)
T ss_pred             CCCcCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhchhHHHHHHhhhccccccccccc
Confidence            5678999999999998                                    99 9999999999999999877521100


Q ss_pred             C----CC-------C-CCchhhhhcc-cCCCCCCCCCCCCccccCCceeEeccccccccccCcceeEEeeceeeeCCCCC
Q 016833           51 G----GG-------A-HDPFDIFQSF-FGGSPFGGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCK  117 (382)
Q Consensus        51 ~----~~-------~-~~~~d~F~~~-Fggg~f~g~~~~~~~~~kg~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~  117 (382)
                      +    ..       + .++.|+|+.| ||+     +  +.+.++++.|+.++|.|||+|+|+|+++++.+++.+.|+.|+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~f~~~~fgg-----~--~~~~~~kg~di~~~l~vsLed~~~G~~~~i~~~r~~~C~~C~  153 (378)
T PRK14283         81 DIFNNINFEDIFQGFGFGIGNIFDMFGFGG-----G--SRHGPQRGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVCN  153 (378)
T ss_pred             ccccccCccccccccccchhhhccccccCC-----C--CCCCccCCCCeEEEeeeeHHHHhCCcceEEEeeeeccCCCCC
Confidence            0    00       0 0223445444 431     1  112345789999999999999999999999999999999999


Q ss_pred             CCCccCCCc-ccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCCCceEEEeceEEEEEeccCCC
Q 016833          118 GKGSKSGAS-MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQ  196 (382)
Q Consensus       118 G~G~~~~~~-~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G~~  196 (382)
                      |+|...+.. .+|+.|+|+|++...+++++|++++ +.+|+.|.|+|+++.  +.|..|+|++++.+.+.++|.||||++
T Consensus       154 G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~-~~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~l~V~IppG~~  230 (378)
T PRK14283        154 GSRAEPGSEVKTCPTCGGTGQVKQVRNTILGQMMN-VTTCPDCQGEGKIVE--KPCSNCHGKGVVRETKTISVKIPAGVE  230 (378)
T ss_pred             ccccCCCCCCccCCCcCCccEEEEEEeccCceEEE-EEECCCCCccceecC--CCCCCCCCceeeccceeEEEEECCCCC
Confidence            999987764 7899999999999999999999865 579999999999976  889999999999999999999999999


Q ss_pred             CCCEEEeCCCCCCCC-CCCCccEEEEEEEecCCccccccccceeeeccCHHHHhCCCEEEEEecCCcEEEEEeCCCcccc
Q 016833          197 NGQKITFPGEADEAP-DTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVK  275 (382)
Q Consensus       197 ~g~~i~~~geG~~~~-g~~~GDl~v~i~~k~h~~F~R~g~DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~  275 (382)
                      +|++|+|+|+|++.+ +..+|||||+|++++|+.|+|+|+||++++.|+|.+||+|+++.|+|||| .|.|.+|+|  ++
T Consensus       231 ~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~r~G~DL~~~~~Isl~eAl~G~~~~i~tldG-~i~v~ip~g--~~  307 (378)
T PRK14283        231 TGSRLRVSGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQAALGDTVDVPTIDG-PVELKIPAG--TQ  307 (378)
T ss_pred             CCcEEEEeccccCCCCCCCCccEEEEEEEEcCCCEEEecCCEEEEEecCHHHHhcCCeEEEEcCCc-eEEEEeCCC--CC
Confidence            999999999999854 57899999999999999999999999999999999999999999999999 589999998  79


Q ss_pred             CCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHhCC
Q 016833          276 PDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP  324 (382)
Q Consensus       276 ~g~~~~i~g~GmP~~~~~~~~GdL~i~~~V~~P~~l~~~~~~~l~~~lp  324 (382)
                      +|++++|+|+|||... ...+|||||+|+|.||++|+++|+++|++++.
T Consensus       308 ~g~~~ri~g~G~p~~~-~~~~GdL~v~~~v~~P~~l~~~q~~ll~~~~~  355 (378)
T PRK14283        308 SGTTFRLKGHGMPSLR-WSGKGNLYVKVKVVVPKKLSPKQKELLREFAS  355 (378)
T ss_pred             CCCEEEECCCCCCCCC-CCCCCCEEEEEEEEeCCCCCHHHHHHHHHHHh
Confidence            9999999999999764 33689999999999999999999999999985

>PRK14291 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.4e-66  Score=518.14  Aligned_cols=305  Identities=32%  Similarity=0.644  Sum_probs=260.7

Q ss_pred             CcchhhhcCCCCC------------------------------------ce-eccCccccccccccchhhhhCCCC--CC
Q 016833           11 NTKYYEILGVSKK------------------------------------RF-VLSDPEKREIYDQYGEDALKEGMG--GG   51 (382)
Q Consensus        11 ~~~~Y~iLgv~~~------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g~~--~~   51 (382)
                      .+|||+||||+++                                    || |||||+||++||+||++++..+.+  ++
T Consensus         2 ~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~~~~   81 (382)
T PRK14291          2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQQQG   81 (382)
T ss_pred             CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhcCHHHHHHHhhhcccccccccCcccc
Confidence            4799999999999                                    99 999999999999999987753211  00


Q ss_pred             -C-----CCCCchhhhhccc---CCC-CCCCC----CCC--CccccCCceeEeccccccccccCcceeEEeeceeeeCCC
Q 016833           52 -G-----GAHDPFDIFQSFF---GGS-PFGGG----SSR--GRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTK  115 (382)
Q Consensus        52 -~-----~~~~~~d~F~~~F---ggg-~f~g~----~~~--~~~~~kg~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~  115 (382)
                       .     .+.++.|+|+.||   |.+ .|++.    +++  ..++.++.|+.+.|.|||+|+|+|+++++.+++.+.|+.
T Consensus        82 ~~~~~~~~~~~~~d~f~~~f~~fg~~~~fg~~~~~~~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~  161 (382)
T PRK14291         82 QEGFSDFGGGNIEDILEDVFDIFGFGDIFGRRRATRERRKTYQRPVKGEDIYQTVEISLEEAYTGTTVSLEVPRYVPCEA  161 (382)
T ss_pred             ccccccccCCCHHHHHHHHHHhccccccccccccccccccccccccCCCCEEEEEEEEHHHhhCCEEEEEEEeeeccCCC
Confidence             0     1235667888874   211 12210    110  122457899999999999999999999999999999999


Q ss_pred             CCCCCccCCCc-ccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCCCceEEEeceEEEEEeccC
Q 016833          116 CKGKGSKSGAS-MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKG  194 (382)
Q Consensus       116 C~G~G~~~~~~-~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G  194 (382)
                      |+|+|...+.. .+|+.|+|+|.++..     +++++++.+|+.|+|+|. +  ++.|..|+|.+++.+.++|+|+||||
T Consensus       162 C~G~G~~~~~~~~~C~~C~G~G~~~~~-----~g~~~~~~~C~~C~G~G~-~--~~~C~~C~G~g~v~~~~~l~V~Ip~G  233 (382)
T PRK14291        162 CGGTGYDPGSGEKVCPTCGGSGEIYQR-----GGFFRISQTCPTCGGEGV-L--REPCSKCNGRGLVIKKETIKVRIPPG  233 (382)
T ss_pred             CccccCCCCCCCccCCCCCCceEEEEe-----cceEEEEecCCCCCCceE-E--ccCCCCCCCCceEEeeeEEEEEeCCC
Confidence            99999988764 789999999987654     134567899999999996 4  38899999999999999999999999


Q ss_pred             CCCCCEEEeCCCCCCCC-CCCCccEEEEEEEecCCccccccccceeeeccCHHHHhCCCEEEEEecCCcEEEEEeCCCcc
Q 016833          195 MQNGQKITFPGEADEAP-DTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEV  273 (382)
Q Consensus       195 ~~~g~~i~~~geG~~~~-g~~~GDl~v~i~~k~h~~F~R~g~DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~v  273 (382)
                      +.+|++|+|+|+|++.+ ++.+|||||+|++++|+.|+|+|+||++++.|+|.|||+|+++.|+||||+.+.|+||+|  
T Consensus       234 ~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~~~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~l~V~Ip~g--  311 (382)
T PRK14291        234 VDNGSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLGTELEVPLLDGKKEKVKIPPG--  311 (382)
T ss_pred             CCCCCEEEEecCcCCCCCCCCCccEEEEEEEccCCCeeeecCCeEEEEEeeHHHHhCCCEEEEecCCCCEEEEEECCc--
Confidence            99999999999999864 788999999999999999999999999999999999999999999999999899999998  


Q ss_pred             ccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCC--CCC------HHHHHHHHHhCCCC
Q 016833          274 VKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPE--SLS------PDQCKMLETVLPPR  326 (382)
Q Consensus       274 i~~g~~~~i~g~GmP~~~~~~~~GdL~i~~~V~~P~--~l~------~~~~~~l~~~lp~~  326 (382)
                      +++|++++|+|+|||..+. ..+|||||+|+|.||+  .|+      ++|+++|++|+...
T Consensus       312 ~~~G~~i~i~G~G~p~~~~-~~~GDL~V~~~V~~P~~~~ls~~~~~~~~~~~~~~~l~~~~  371 (382)
T PRK14291        312 TKEGDKIRVPGKGMPRLKG-SGYGDLVVRVHIDVPKISMLSKLMGDGKKAKKLLKELDKLL  371 (382)
T ss_pred             cCCCCEEEECCCCCCCCCC-CCCCCEEEEEEEEeCCCcCcCccccCCHHHHHHHHHHHhhc
Confidence            7999999999999997643 3689999999999998  499      99999999987543

>PRK14289 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=3.9e-66  Score=517.70  Aligned_cols=311  Identities=32%  Similarity=0.661  Sum_probs=268.5

Q ss_pred             CCCCcchhhhcCCCCC-------------------------------------ce-eccCccccccccccchhhhhCCCC
Q 016833            8 KSDNTKYYEILGVSKK-------------------------------------RF-VLSDPEKREIYDQYGEDALKEGMG   49 (382)
Q Consensus         8 ~~~~~~~Y~iLgv~~~-------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g~~   49 (382)
                      |+.++|||++|||+++                                     || |||||+||++||+||+++++++.+
T Consensus         1 ~~~~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~~~~~~~~   80 (386)
T PRK14289          1 MAEKRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVGGAAG   80 (386)
T ss_pred             CCccCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHhcccccccCCC
Confidence            3456899999999999                                     99 999999999999999988763211


Q ss_pred             -CC--CCCCCchhhhhcc---cCCC--CCCC----C-CCCCccccCCceeEeccccccccccCcceeEEeeceeeeCCCC
Q 016833           50 -GG--GGAHDPFDIFQSF---FGGS--PFGG----G-SSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKC  116 (382)
Q Consensus        50 -~~--~~~~~~~d~F~~~---Fggg--~f~g----~-~~~~~~~~kg~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C  116 (382)
                       ++  +++.++.|+|+.|   |++.  ++++    + +.....+.++.|+++.|.|||||+|+|+++++.+++.+.|+.|
T Consensus        81 ~~~~~~~~~~~~~~f~~f~~~fg~~~gg~~~~~~~~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C  160 (386)
T PRK14289         81 GGGFSGEGMSMEDIFSMFGDIFGGHGGGFGGFGGFGGGGSQQRVFRGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHC  160 (386)
T ss_pred             CCCCCCCCcChhhhhHHhhhhhcccccCcccccccccccccCCCCCCCCeEEEEEEEHHHhhCCeEEEEEEEeecccCCC
Confidence             11  1122444554433   5431  1100    0 0111234578999999999999999999999999999999999


Q ss_pred             CCCCccCCCc-ccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCCCceEEEeceEEEEEeccCC
Q 016833          117 KGKGSKSGAS-MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGM  195 (382)
Q Consensus       117 ~G~G~~~~~~-~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G~  195 (382)
                      +|+|...... .+|+.|+|+|+++..++++||++++ +.+|+.|.|+|+++.  ..|+.|+|++++.+.++++|.||+|+
T Consensus       161 ~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~-~~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~~~V~Ip~G~  237 (386)
T PRK14289        161 HGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQT-QSTCPTCNGEGKIIK--KKCKKCGGEGIVYGEEVITVKIPAGV  237 (386)
T ss_pred             CCCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEE-EEecCCCCccccccC--cCCCCCCCCcEEeeeEEEEEEeCCCC
Confidence            9999987654 7899999999999999999999865 899999999999986  88999999999999999999999999


Q ss_pred             CCCCEEEeCCCCCCC-CCCCCccEEEEEEEecCCccccccccceeeeccCHHHHhCCCEEEEEecCCcEEEEEeCCCccc
Q 016833          196 QNGQKITFPGEADEA-PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVV  274 (382)
Q Consensus       196 ~~g~~i~~~geG~~~-~g~~~GDl~v~i~~k~h~~F~R~g~DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi  274 (382)
                      ++|++|+|+|+|++. ++..+|||+|+|++++|+.|+|+++||++++.|+|.+||+|+++.|+||||+ +.|.||+|  +
T Consensus       238 ~~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~-i~v~ip~g--~  314 (386)
T PRK14289        238 AEGMQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALGGAVEVPTIDGK-AKVKIEAG--T  314 (386)
T ss_pred             CCCCEEEEeccccCCCCCCCCccEEEEEEEecCCcccccccceeEEeccCHHHHhCCCeEEeecCCce-EEEEECCc--c
Confidence            999999999999985 4678999999999999999999999999999999999999999999999997 89999998  7


Q ss_pred             cCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHhCCC
Q 016833          275 KPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPP  325 (382)
Q Consensus       275 ~~g~~~~i~g~GmP~~~~~~~~GdL~i~~~V~~P~~l~~~~~~~l~~~lp~  325 (382)
                      ++|++++|+|+|||..+. ..+|||||+|+|.||+.|+++|+++|++|+..
T Consensus       315 ~~g~~~ri~g~G~p~~~~-~~~GDL~v~~~v~~P~~l~~~q~~~l~~l~~~  364 (386)
T PRK14289        315 QPGKVLRLRNKGLPSVNG-YGTGDLLVNVSVYIPETLSKEEKQTLEKMENS  364 (386)
T ss_pred             CCCcEEEECCCCcCCCCC-CCCCcEEEEEEEEeCCCCCHHHHHHHHHHHhh
Confidence            999999999999997543 36899999999999999999999999999974

>PRK14292 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=9.4e-66  Score=512.66  Aligned_cols=303  Identities=31%  Similarity=0.656  Sum_probs=266.8

Q ss_pred             chhhhcCCCCC------------------------------------ce-eccCccccccccccchhhhhCCCC-C--CC
Q 016833           13 KYYEILGVSKK------------------------------------RF-VLSDPEKREIYDQYGEDALKEGMG-G--GG   52 (382)
Q Consensus        13 ~~Y~iLgv~~~------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g~~-~--~~   52 (382)
                      |||+||||+++                                    || |||||+||++||+||+++..++.+ +  ++
T Consensus         3 d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~~~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~~~~~~~~~~~~~~   82 (371)
T PRK14292          3 DYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGMPGGDPFGG   82 (371)
T ss_pred             ChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCChhHHHHHHHHHHHHHHhcchhhhhhHhhcCCcccccccCCcccCc
Confidence            89999999999                                    99 999999999999999876421101 1  11


Q ss_pred             CCCCchhhhhcccCCCCCCCCCCCCccccCCceeEeccccccccccCcceeEEeeceeeeCCCCCCCCccCCC--cccCC
Q 016833           53 GAHDPFDIFQSFFGGSPFGGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGA--SMKCS  130 (382)
Q Consensus        53 ~~~~~~d~F~~~Fggg~f~g~~~~~~~~~kg~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~--~~~C~  130 (382)
                      .++|++|+|+.|||+++++++ ...+++.++.|+.+.+.|||+|+|+|+++++.+++.+.|+.|+|+|.....  ..+|+
T Consensus        83 ~~~d~~d~f~~~fg~~~~~~~-~~~~~~~~g~d~~~~l~~sLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~~C~  161 (371)
T PRK14292         83 MGFDPMDIFEQLFGGAGFGGG-RGRRGPARGDDLETEARITLEQARAGEEVEVEVDRLTECEHCHGSRTEPGGKPPKTCP  161 (371)
T ss_pred             cCCChHHHHHHhhCCCCcCCC-CCcccccCCCCeEEEEeccHHHHcCCeEEEEEEEeeecCCCCcccccCCCCCCCccCC
Confidence            124667999999985322111 111234679999999999999999999999999999999999999998764  47899


Q ss_pred             CCCcccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCCCceEEEeceEEEEEeccCCCCCCEEEeCCCCCCC
Q 016833          131 GCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEA  210 (382)
Q Consensus       131 ~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G~~~g~~i~~~geG~~~  210 (382)
                      .|+|+|.+...+++.||++++ +.+|+.|+|.|+.+.  +.|+.|+|++++.+.+.++|.||+|+.+|++|+|+|+|++.
T Consensus       162 ~C~G~G~~~~~~~~~~g~~~~-~~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~G~G~~~  238 (371)
T PRK14292        162 TCRGAGAVRAQARTIFGVVET-QQPCPTCRGEGQIIT--DPCTVCRGRGRTLKAETVKVKLPRGIDEGYRIRVAGMGNEG  238 (371)
T ss_pred             CCCCccEEEEEEeccCceEEE-eeecCCCcccceecC--CCCCCCCCceEEeecceEEEEECCCCCCCcEEEEecCcCCC
Confidence            999999999888888999865 779999999999976  89999999999999999999999999999999999999997


Q ss_pred             CCCCCccEEEEEEEecCCccccccccceeeeccCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEEEEcCCCCCCC
Q 016833          211 PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMY  290 (382)
Q Consensus       211 ~g~~~GDl~v~i~~k~h~~F~R~g~DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~i~g~GmP~~  290 (382)
                      +++. |||||+|++++|+.|+|+|+||++++.|+|.|||+|+++.|+||||+. .|.+|+|  +++|++++|+|+|||..
T Consensus       239 ~~~~-GDL~v~i~v~~h~~f~r~g~dL~~~~~isl~eAl~G~~~~i~tldG~~-~v~ip~g--~~~g~~~~i~g~G~p~~  314 (371)
T PRK14292        239 PGGN-GDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLDGPQ-VIEVKPG--TQHGDLHRLRGQGMPRL  314 (371)
T ss_pred             CCCC-CCEEEEEEEecCCccccchhceeEEeccCHHHHhCCCeEEEECCCCCE-EEecCCC--cCCCcEEEECCCCCCCC
Confidence            7665 999999999999999999999999999999999999999999999984 7999998  79999999999999976


Q ss_pred             CCCCCCCcEEEEEEEECCCCCCHHHHHHHHHhCC
Q 016833          291 QRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP  324 (382)
Q Consensus       291 ~~~~~~GdL~i~~~V~~P~~l~~~~~~~l~~~lp  324 (382)
                      ++ ..+|||||+|+|.||+.|+++|+++|++++.
T Consensus       315 ~~-~~~GDL~V~~~v~~P~~l~~~q~~ll~~~~~  347 (371)
T PRK14292        315 QG-AGTGDLIVEYEIAVPKQLSPEAREALEAYAR  347 (371)
T ss_pred             CC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence            43 3579999999999999999999999999984

>PRK14299 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=9e-49  Score=378.44  Aligned_cols=229  Identities=34%  Similarity=0.629  Sum_probs=192.6

Q ss_pred             CcchhhhcCCCCC------------------------------------ce-eccCccccccccccchhhhhCCC-----
Q 016833           11 NTKYYEILGVSKK------------------------------------RF-VLSDPEKREIYDQYGEDALKEGM-----   48 (382)
Q Consensus        11 ~~~~Y~iLgv~~~------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g~-----   48 (382)
                      .+|||+||||+++                                    || |||||+||+.||+||++++..+.     
T Consensus         3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~~~~~~~~~~~~   82 (291)
T PRK14299          3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGPPP   82 (291)
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCccccccccCCCC
Confidence            5799999999999                                    99 99999999999999988643211     


Q ss_pred             C-CC-CC-----CCCchhhhhcccCCC-CCCCCC----CCCccccCCceeEeccccccccccCcceeEEeeceeeeCCCC
Q 016833           49 G-GG-GG-----AHDPFDIFQSFFGGS-PFGGGS----SRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKC  116 (382)
Q Consensus        49 ~-~~-~~-----~~~~~d~F~~~Fggg-~f~g~~----~~~~~~~kg~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C  116 (382)
                      + ++ ++     ..++.|+|+.|||++ ++++.+    .....++++.|+.+.+.|||+|+|.|+++++.+.        
T Consensus        83 ~~~~~~~~~~~~~~~~~d~f~~~fgg~~~~~~~g~~~~~~~~~~~~g~dl~~~l~isL~ea~~G~~~~i~l~--------  154 (291)
T PRK14299         83 GPPGGGDFSGFNVGDFSDFFQQLFGGRGGFGGFGDLFGSVGRRARKGRDLEAELPLTLEEAYRGGEKVVEVA--------  154 (291)
T ss_pred             CCCCCCCccccCcCCHHHHHHHHhCCCCCCCCcccccccccCCCCCCCCEEEEEEecHHHHhCCCeEEEeeC--------
Confidence            0 01 11     135678999999852 111100    0012346789999999999999999999887531        


Q ss_pred             CCCCccCCCcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCCCceEEEeceEEEEEeccCCC
Q 016833          117 KGKGSKSGASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQ  196 (382)
Q Consensus       117 ~G~G~~~~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G~~  196 (382)
                                                                                         .+.++|+||||++
T Consensus       155 -------------------------------------------------------------------g~~~~V~Ip~G~~  167 (291)
T PRK14299        155 -------------------------------------------------------------------GERLSVRIPPGVR  167 (291)
T ss_pred             -------------------------------------------------------------------CEEEEEecCCCcC
Confidence                                                                               1357899999999


Q ss_pred             CCCEEEeCCCCCCCCCCCCccEEEEEEEecCCccccccccceeeeccCHHHHhCCCEEEEEecCCcEEEEEeCCCccccC
Q 016833          197 NGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKP  276 (382)
Q Consensus       197 ~g~~i~~~geG~~~~g~~~GDl~v~i~~k~h~~F~R~g~DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~  276 (382)
                      +|++|+|+|+|++.     |||+|+|++++|+.|+|+|+||+++++|||.+||+|+++.|+||||+ +.|++|++  +++
T Consensus       168 ~G~~ir~~g~G~~~-----GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~v~tldG~-~~v~ip~~--~~~  239 (291)
T PRK14299        168 EGQVIRLAGKGRQG-----GDLYLVVRLLPHPVFRLEGDDLYATVDVPAPIAVVGGKVRVMTLDGP-VEVTIPPR--TQA  239 (291)
T ss_pred             CCcEEEECCCCCCC-----CCEEEEEEEcCCCCeEEECCEEEEEEecCHHHHhCCCEEEEECCCCC-EEEEeCCC--cCC
Confidence            99999999999863     99999999999999999999999999999999999999999999997 89999987  899


Q ss_pred             CcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHhCC
Q 016833          277 DQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP  324 (382)
Q Consensus       277 g~~~~i~g~GmP~~~~~~~~GdL~i~~~V~~P~~l~~~~~~~l~~~lp  324 (382)
                      |++++|+|+|||..  +..+|||||+|+|.||+.|+++++++|++|+.
T Consensus       240 g~~~rl~g~G~p~~--~~~~GDL~v~~~V~~P~~l~~~~~~~l~~l~~  285 (291)
T PRK14299        240 GRKLRLKGKGWPRG--PAGRGDQYAEVRITIPTRPTPEEERLYKQLAE  285 (291)
T ss_pred             CCEEEECCCCCCCC--CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence            99999999999963  35689999999999999999999999999974

>PRK10266 curved DNA-binding protein CbpA; Provisional

Probab=100.00  E-value=2.2e-47  Score=371.32  Aligned_cols=245  Identities=28%  Similarity=0.434  Sum_probs=201.0

Q ss_pred             CcchhhhcCCCCC------------------------------------ce-eccCccccccccccchh----hhhCC--
Q 016833           11 NTKYYEILGVSKK------------------------------------RF-VLSDPEKREIYDQYGED----ALKEG--   47 (382)
Q Consensus        11 ~~~~Y~iLgv~~~------------------------------------AY-vLsD~~KR~~YD~~G~~----g~~~g--   47 (382)
                      .+|||+||||+++                                    || |||||+||+.||+||+.    ++.+.  
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~~~~~~~~~~~~~   82 (306)
T PRK10266          3 LKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQFNRQFQ   82 (306)
T ss_pred             cCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHhhccccCcccccccc
Confidence            4799999999999                                    99 99999999999999864    22211  


Q ss_pred             CCCC--CCCCCchhhhhcccCCCCCCCCCCCCccccCCceeEeccccccccccCcceeEEeeceeeeCCCCCCCCccCCC
Q 016833           48 MGGG--GGAHDPFDIFQSFFGGSPFGGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGA  125 (382)
Q Consensus        48 ~~~~--~~~~~~~d~F~~~Fggg~f~g~~~~~~~~~kg~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~  125 (382)
                      .+++  ....++.|+|+.|||+++   +..+...++++.|+.+++.|||+|+|+|+++++.+++.+    |.        
T Consensus        83 ~~~~~~~~~~~~~~~f~~~~g~~~---~~~~~~~~~kg~di~~~v~isLee~~~G~~k~i~~~~~~----~~--------  147 (306)
T PRK10266         83 HGDGQSFNAEDFDDIFSSIFGQHA---RQSRQRPAARGHDIEIEVAVFLEETLTEHKRTISYNLPV----YN--------  147 (306)
T ss_pred             cCCCCCCCCCCHHHHHHHHhCCCC---CCCCCCCCCCCCceEEEEEEEHHHhcCCceEEEEEeccc----cc--------
Confidence            0011  112357799999997421   111122345789999999999999999999999887642    21        


Q ss_pred             cccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCCCceEEEeceEEEEEeccCCCCCCEEEeCC
Q 016833          126 SMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG  205 (382)
Q Consensus       126 ~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G~~~g~~i~~~g  205 (382)
                              |.|...           +                              ...++++|.||+|+++|++|+|+|
T Consensus       148 --------g~G~~~-----------~------------------------------~~~~~~~V~Ip~G~~~G~~i~~~g  178 (306)
T PRK10266        148 --------AFGMIE-----------Q------------------------------EIPKTLNVKIPAGVGNGQRIRLKG  178 (306)
T ss_pred             --------CCCeEE-----------E------------------------------eeeEEEEEEECCCCcCCcEEEEec
Confidence                    222211           0                              123679999999999999999999


Q ss_pred             CCCCCC-CCCCccEEEEEEEecCCccccccccceeeeccCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEEEEcC
Q 016833          206 EADEAP-DTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAIND  284 (382)
Q Consensus       206 eG~~~~-g~~~GDl~v~i~~k~h~~F~R~g~DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~i~g  284 (382)
                      +|++.+ +..+|||+|+|++++|+.|+|+|+||+++++|||.+||+|+++.|+|+||+ +.|++|++  +++|++++|+|
T Consensus       179 ~G~~~~~~~~~GDl~v~i~v~ph~~f~r~g~DL~~~~~Isl~~al~G~~~~i~~~~g~-v~v~ip~g--~~~g~~~ri~g  255 (306)
T PRK10266        179 QGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPLAPWEAALGAKVTVPTLKES-ILLTIPPG--SQAGQRLRVKG  255 (306)
T ss_pred             CCcCCCCCCCCccEEEEEEEcCCCCeEEeCCceEEEEecCHHHHhCCCEEEeeCCCcc-EEEEeCCC--cCCCCEEEECC
Confidence            999854 567899999999999999999999999999999999999999999999998 89999998  69999999999


Q ss_pred             CCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHhCCC
Q 016833          285 EGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPP  325 (382)
Q Consensus       285 ~GmP~~~~~~~~GdL~i~~~V~~P~~l~~~~~~~l~~~lp~  325 (382)
                      +|||..+   .+|||||+|+|.||+.|+++|+++|++|+..
T Consensus       256 ~G~p~~~---~~GdL~v~~~v~~P~~l~~~q~~l~~~l~~~  293 (306)
T PRK10266        256 KGLVSKK---QTGDLYAVLKIVMPPKPDEKTAALWQQLADA  293 (306)
T ss_pred             CCCCCCC---CCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence            9999742   4899999999999999999999999999864

>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ

Probab=100.00  E-value=2.5e-32  Score=282.07  Aligned_cols=158  Identities=18%  Similarity=0.231  Sum_probs=140.4

Q ss_pred             CCceeEeccccccccccCcceeEEeeceeeeCCCCCCCCccCCCcccCCCCCcccEEEEEEecCCccceeecccCCCCcc
Q 016833           82 RGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKG  161 (382)
Q Consensus        82 kg~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G  161 (382)
                      ..-+|.+.|.|+|+++|+|+++++++.|.+.|    |.|                                         
T Consensus       655 ~~~dI~y~l~vtLEeLY~G~tKkIKitR~V~~----g~G-----------------------------------------  689 (871)
T TIGR03835       655 TNVNLVYEEEVPQILFFNNQIKEIKYTRHTVD----GNT-----------------------------------------  689 (871)
T ss_pred             cccceEEecccCHHHHhCCCeEEEEEEEeecc----CCC-----------------------------------------
Confidence            45688999999999999999999999887654    221                                         


Q ss_pred             eeEEecCCCCCCCCCCceEEEeceEEEEEeccCCCCCCEEEeCCCCCCCCCCCCccEEEEEEEecCCccccccccceeee
Q 016833          162 TGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEH  241 (382)
Q Consensus       162 ~G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G~~~g~~i~~~geG~~~~g~~~GDl~v~i~~k~h~~F~R~g~DL~~~~  241 (382)
                                      ...+.+.++|+|+||+|+++|++|+|+|+|++.+++. |||||+|++++|+.|+|+|+|||+++
T Consensus       690 ----------------~ktvkE~ktLeVkIPpGVkdGqkIRf~GeGDegpgg~-GDLyVvIkVKPHp~FrRdGdDL~~~v  752 (871)
T TIGR03835       690 ----------------ESTTNEAITLEIQLPITSQLNISAIFKGFGHDFGNGC-GDLKVVFKVIPSNFFQIKNDGLHVAA  752 (871)
T ss_pred             ----------------cceeeeeEEEEEecCCCCCCCCEEEeccccCCCCCCC-CCEEEEEEEcCCCCeEEECCeEEEEE
Confidence                            1134456899999999999999999999999876664 99999999999999999999999999


Q ss_pred             ccCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEE
Q 016833          242 TLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVD  306 (382)
Q Consensus       242 ~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~i~g~GmP~~~~~~~~GdL~i~~~V~  306 (382)
                      +|+|.+||+|+++.|+||||+ +.|+||++  ++||++++|+|+|||..  ++.||||||+|.|.
T Consensus       753 ~ISL~EALLGgtIeIpTLDGr-VkLkIPpg--TqpGqvLRIkGKGMP~~--~~~RGDLyV~f~V~  812 (871)
T TIGR03835       753 LVDPLVAYNGGIIDVFGPNKL-FNVRIPGG--IKVNDQVIFKDLGLTKT--KYDKGSLIVHLYYS  812 (871)
T ss_pred             ecCHHHHhcCCEEEeeCCCCC-EEEeeCCC--CCCCcEEEECCCCCCCC--CCCCCCEEEEEEEe
Confidence            999999999999999999998 89999988  79999999999999954  34689999999986

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.

>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=7.1e-34  Score=270.68  Aligned_cols=274  Identities=37%  Similarity=0.655  Sum_probs=214.2

Q ss_pred             CCCcchhhhcCCCCC-------------------------------------ce-eccCccccccccccchhhhhCCC--
Q 016833            9 SDNTKYYEILGVSKK-------------------------------------RF-VLSDPEKREIYDQYGEDALKEGM--   48 (382)
Q Consensus         9 ~~~~~~Y~iLgv~~~-------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g~--   48 (382)
                      ...+|||+||||+++                                     || |||||+||+.||+||++|++...  
T Consensus        13 ~~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL~~~~~~   92 (336)
T KOG0713|consen   13 LAGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRKHYDTYGEEGLKDENKD   92 (336)
T ss_pred             hcCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhhcccccc
Confidence            457899999999999                                     99 99999999999999999997421  


Q ss_pred             CCCCCCCCchhhhhcccCCCCCC-CCCCCCccccCCceeEeccccccccccCcceeEEeeceeeeCCCCCCCCccCCCcc
Q 016833           49 GGGGGAHDPFDIFQSFFGGSPFG-GGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASM  127 (382)
Q Consensus        49 ~~~~~~~~~~d~F~~~Fggg~f~-g~~~~~~~~~kg~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~  127 (382)
                      +.+++++  .++|+.||+-.++. ++........++.++...++.+++++|.|...+..-.+.+.|. |.|+-     .-
T Consensus        93 ~~~g~~~--~~~f~~~f~dfg~~~~g~~~~e~~~~g~~V~~~~e~~~~h~y~~~~~e~~r~~~v~~~-~~g~~-----~~  164 (336)
T KOG0713|consen   93 GEGGGGG--NDIFSAFFGDFGVTVGGNPLEEALPKGSDVSSDLEKQLEHFYMGNFVEEVREKGVYKP-APGTR-----KC  164 (336)
T ss_pred             cccCCcc--cchHHHhhcccccccCCCcccCCCCCCceEEeehhhchhhhhcccHHHHHhccCceee-cCccc-----cc
Confidence            1111111  47777777642221 1111123357899999999999999999988776555555543 11111     01


Q ss_pred             cCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCCCceEEEeceEEEEEeccCCCCCCEEEeCCCC
Q 016833          128 KCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEA  207 (382)
Q Consensus       128 ~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G~~~g~~i~~~geG  207 (382)
                      .|.      ..+..++.+||+++.+|.               ..|..|.+.+.+.+...+++.+..|+..+....+..+|
T Consensus       165 ~~~------~~~~~~~~~~g~~~~~q~---------------~~~~~~~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~  223 (336)
T KOG0713|consen  165 NCR------LEMFTQQEGPGRFQMLQE---------------AVCDECPNVKLVLEEDPLEVEFERGDADGPEEIFELEG  223 (336)
T ss_pred             CCh------hhheeeccCCChhhhhhh---------------hhhccCCccceeecCCceeeeeeecccCCceeeeeccC
Confidence            111      234456777777766652               45666777788889999999999999999999999999


Q ss_pred             CCCCCCCCccEEEEEEEecCCccccccccceeeeccCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEEEEcCCCC
Q 016833          208 DEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGM  287 (382)
Q Consensus       208 ~~~~g~~~GDl~v~i~~k~h~~F~R~g~DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~i~g~Gm  287 (382)
                      -+..-+.+||+++.+..-+|+.|.|+++||++++.|+|.++|.|+...+.++|+..+.++..  .+..|+..++..++||
T Consensus       224 ~~h~~~~~gD~~f~~~~y~~~~~~~k~~~~~~n~~~sl~~~~v~~~~e~~~~d~~~~~~~r~--~~~~p~~~~~~~~~~~  301 (336)
T KOG0713|consen  224 EPHIDGVPGDLFFKIVSYTHPRFERKGDDLYTNVTISLEAALVGFEMEILHLDGHYVEVSRK--KITWPGARTRKKGEGM  301 (336)
T ss_pred             CcceecccCCceeeeEEecccceecCccchhhHHHHHHHHHHHHHHHHhhccchhhhhhhhh--hccccchhhhhhhccc
Confidence            88778899999999999999999999999999999999999999999999999987666544  3468999999999999


Q ss_pred             CCCCCCCCCCcEEEEEEEECCCC-CCH
Q 016833          288 PMYQRPFMRGKLYIHFTVDFPES-LSP  313 (382)
Q Consensus       288 P~~~~~~~~GdL~i~~~V~~P~~-l~~  313 (382)
                      |..++....|++|++|.+.+|.+ ++.
T Consensus       302 ~~l~~~~~~~~~~~t~~~~~~~~~~~~  328 (336)
T KOG0713|consen  302 PLLKNRNEKGNLYVTFDVEFPKSSLSD  328 (336)
T ss_pred             hhhhccchhcceeEEecccCcccccch
Confidence            98777778999999999999966 555

>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.95  E-value=1.5e-28  Score=236.33  Aligned_cols=207  Identities=29%  Similarity=0.645  Sum_probs=176.4

Q ss_pred             chhhhcCCCCC------------------------------------ce-eccCccccccccccchhhhhCCCCCCCCCC
Q 016833           13 KYYEILGVSKK------------------------------------RF-VLSDPEKREIYDQYGEDALKEGMGGGGGAH   55 (382)
Q Consensus        13 ~~Y~iLgv~~~------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g~~~~~~~~   55 (382)
                      |||+||||+++                                    || ||||++||+.||++|..+..      +..+
T Consensus        44 d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~~~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~~~------~~~g  117 (288)
T KOG0715|consen   44 DYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKDKEASKKFKEISEAYEILSDEEKRQEYDVYGLEQHG------EFGG  117 (288)
T ss_pred             chhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHHHHHHhcCHHHHHHHHHhhhhccc------cccC
Confidence            99999999999                                    99 99999999999999987511      1123


Q ss_pred             CchhhhhcccCCCCCCCCCCCCccccCCceeEeccccccccccCcceeEEeeceeeeCCCCCCCCccCCCc-ccCCCCCc
Q 016833           56 DPFDIFQSFFGGSPFGGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGAS-MKCSGCQG  134 (382)
Q Consensus        56 ~~~d~F~~~Fggg~f~g~~~~~~~~~kg~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~-~~C~~C~G  134 (382)
                      ++.++|..+|++     .   ..+...+.++.+.+.++|+++-.|..+.+.+.....|.+|.|.|...+.. ..|..|.|
T Consensus       118 ~~~~~~~~~~~~-----~---~~~~~~~~~~~~d~~~~f~~A~~g~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~  189 (288)
T KOG0715|consen  118 NPFDVFLEFFGG-----K---MNKRVPDKDQYYDLSLDFKEAVRGSKKRISFNVLSDCETCFGSGAEEGAKRESCKTCSG  189 (288)
T ss_pred             CccchHHHhhcc-----c---ccccccCcccccccccCHHHHhhccccceEEEeecccccccCcCcccccccccchhhhC
Confidence            688999999973     0   11223456778889999999999999999999999999999999888765 78999999


Q ss_pred             ccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCCCceEEEeceEEEEEeccCCCCCCEEEeCCCCCCCCCCC
Q 016833          135 SGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTV  214 (382)
Q Consensus       135 ~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G~~~g~~i~~~geG~~~~g~~  214 (382)
                      +|.+....+..+.+    . +|..|.|.|.++.  +.|..|.|.+.+...+.+.|.||+|+.++.+|++.+.+..     
T Consensus       190 ~~~~~~~~~~~f~~----~-~~~~c~~~~~~~~--~~c~~~~g~~~v~~~k~i~i~~~~g~~~~~~l~~~~~~~~-----  257 (288)
T KOG0715|consen  190 RGLVSNPKEDPFIL----Y-TCSYCLGRGLVLR--DNCQACSGAGQVRRAKDIMIVLPAGVRSADTLRFAGHGND-----  257 (288)
T ss_pred             cccccccccCCcce----e-ecccccccceecc--chHHHhhcchhhhhheeEEeecCcccccccEEEEecCCcc-----
Confidence            99665443434322    2 8999999999988  4499999999999999999999999999999999998753     


Q ss_pred             CccEEEEEEEecCCccccccccceeeeccCHHH
Q 016833          215 TGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTE  247 (382)
Q Consensus       215 ~GDl~v~i~~k~h~~F~R~g~DL~~~~~I~l~e  247 (382)
                        ||+|.|.|.+++.|+|+|.|+++++.|++.+
T Consensus       258 --~l~v~~~v~~~~~~~r~~~~i~~~~~i~~~~  288 (288)
T KOG0715|consen  258 --DLFVRLIVAKSPSFRREGKDILYDAIISFTQ  288 (288)
T ss_pred             --eEEEEEEeccCcccccccCcccccccccccC
Confidence              9999999999999999999999999998754

>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress

Probab=99.86  E-value=4.6e-22  Score=156.56  Aligned_cols=81  Identities=41%  Similarity=0.657  Sum_probs=70.3

Q ss_pred             cceeeeccCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHH
Q 016833          236 DLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQ  315 (382)
Q Consensus       236 DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~i~g~GmP~~~~~~~~GdL~i~~~V~~P~~l~~~~  315 (382)
                      ||+++++|+|+||++|+++.|+||||+.+.|++|++  +++|+.++|+|+|||...+++.+|||||+|+|.||++||++|
T Consensus         1 DL~~~~~I~l~~al~G~~i~i~~l~g~~~~i~ip~~--~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~q   78 (81)
T PF01556_consen    1 DLYCTIPISLKEALLGGTISIPTLDGKTIKIKIPPG--TQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEVEFPKKLSPEQ   78 (81)
T ss_dssp             EEEEEEEEEHHHHHH-EEEEEE-TTS-EEEEEETST---STT-EEEETTESEEESSSTTSBEEEEEEEEEE--SSTSHHH
T ss_pred             CeEEEEEeCHHHHhCCCEEEEECCCCCEEEEeccCc--cCCCcEEeecCCCCCcCCCCCCcCCEEEEEEEECCCCCCHHH
Confidence            799999999999999999999999999999999998  899999999999999987766899999999999999999999


Q ss_pred             HHH
Q 016833          316 CKM  318 (382)
Q Consensus       316 ~~~  318 (382)
                      +++
T Consensus        79 k~l   81 (81)
T PF01556_consen   79 KEL   81 (81)
T ss_dssp             HHH
T ss_pred             hcC
Confidence            875

The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

Probab=99.63  E-value=8.5e-16  Score=150.72  Aligned_cols=208  Identities=21%  Similarity=0.347  Sum_probs=129.5

Q ss_pred             cchhhhcCCCCC--ce-eccCccccccccccchhhhhCCCC-CCCCCCC-chhhhhcccCCCCCCCCCCCC---------
Q 016833           12 TKYYEILGVSKK--RF-VLSDPEKREIYDQYGEDALKEGMG-GGGGAHD-PFDIFQSFFGGSPFGGGSSRG---------   77 (382)
Q Consensus        12 ~~~Y~iLgv~~~--AY-vLsD~~KR~~YD~~G~~g~~~g~~-~~~~~~~-~~d~F~~~Fggg~f~g~~~~~---------   77 (382)
                      +..||||..+..  || -...+...    .-|..++  |++ .++++.| |.++|..-.++.....+..+.         
T Consensus        51 ~eAYEVLsD~eKRa~YD~fG~~~~~----~gg~gg~--g~~~fgg~~~DIF~~~FgGg~~~~~~~~~~~rG~Dl~~~l~i  124 (371)
T COG0484          51 NEAYEVLSDPEKRAAYDQFGHAGFK----AGGFGGF--GFGGFGGDFGDIFEDFFGGGGGGRRRPNRPRRGADLRYNLEI  124 (371)
T ss_pred             HHHHHHhCCHHHHHHhhccCccccc----cCCcCCC--CcCCCCCCHHHHHHHhhcCCCcccCCCCCcccCCceEEEEEe
Confidence            368999999988  99 76665543    2221121  221 1225556 567885433211111111110         


Q ss_pred             --ccccCCceeEeccccc-cccccCcceeEEeeceeeeCCCCCCCCccCC--------CcccCCCCCcccEEEEEEecCC
Q 016833           78 --RRQRRGEDVIHPLKVS-LEDLYNGTSKKLSLSRNVICTKCKGKGSKSG--------ASMKCSGCQGSGMKVSIRHLGP  146 (382)
Q Consensus        78 --~~~~kg~di~~~l~vt-lee~~~G~~~~i~~~r~~~C~~C~G~G~~~~--------~~~~C~~C~G~G~~~~~~~~gp  146 (382)
                        ....+|....+.++-. .-+.|.|...+ .-+..++|++|+|+|....        ..++|+.|+|+|.++       
T Consensus       125 sleEa~~G~~~~i~~~~~~~C~~C~GsGak-~gt~~~tC~tC~G~G~v~~~~~~g~~~~~~~C~~C~G~G~~i-------  196 (371)
T COG0484         125 TLEEAVFGVKKEIRVTRSVTCSTCHGSGAK-PGTDPKTCPTCNGSGQVRTVQRTGFFSFQQTCPTCNGTGKII-------  196 (371)
T ss_pred             EhhhhccCceeeEecceeeECCcCCCCCCC-CCCCCCcCCCCCCcCeEEEEEeeeEEEEEEECCCCccceeEC-------
Confidence              0012344333333221 33778888766 4456789999999997431        236899999999976       


Q ss_pred             ccceeecccCCCCcceeEEecCCCC-----CCCCC---------------------------------------------
Q 016833          147 SMIQQMQHPCNECKGTGETINDKDR-----CPQCK---------------------------------------------  176 (382)
Q Consensus       147 g~~~~~~~~C~~C~G~G~~~~~k~~-----C~~C~---------------------------------------------  176 (382)
                            +.+|+.|+|.|.+...+..     -....                                             
T Consensus       197 ------~~pC~~C~G~G~v~~~~~i~V~IPaGv~~g~~ir~~g~G~~g~~Ggp~GDLyv~i~v~~h~~F~R~g~dL~~~~  270 (371)
T COG0484         197 ------KDPCGKCKGKGRVKKKKSISVNIPAGVDDGDRIRLSGEGEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEV  270 (371)
T ss_pred             ------CCCCCCCCCCCeEeeeeEEEEECCCCCccCCEEEEecCcccCCCCCCCccEEEEEEeecCCCeEECCCceEecc
Confidence                  7899999999997653332     11111                                             


Q ss_pred             ---------C-ceE-EEeceEEEEEeccCCCCCCEEEeCCCCCCC-CCCCCccEEEEEEEecCCcccccccccee
Q 016833          177 ---------G-EKV-IQEKKVLEVIVEKGMQNGQKITFPGEADEA-PDTVTGDIVFVLQQKEHPKFKRKGDDLFV  239 (382)
Q Consensus       177 ---------G-~g~-~~~~~~l~V~Ip~G~~~g~~i~~~geG~~~-~g~~~GDl~v~i~~k~h~~F~R~g~DL~~  239 (382)
                               | .-. ......++|+||+|++.|+.++|+|+|.+. .+...|||||.|++.-+..+......|+-
T Consensus       271 ~Is~~~AalG~~i~vptl~g~~~l~ip~Gtq~G~~~rl~gkG~p~~~~~~~GDl~v~v~v~~P~~ls~~q~~lL~  345 (371)
T COG0484         271 PISFTEAALGGEIEVPTLDGRVKLKIPAGTQTGEVFRLRGKGMPKLRSGGRGDLYVRVKVETPKNLSDEQKELLE  345 (371)
T ss_pred             ccCHHHHhcCCEEEEEecCCCEEEecCCCCccCcEEEEcCCCccccCCCCcCCEEEEEEEEcCCCCCHHHHHHHH
Confidence                     2 111 111244999999999999999999999984 45667999999999988876655544443

>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.62  E-value=3.6e-15  Score=142.60  Aligned_cols=106  Identities=37%  Similarity=0.678  Sum_probs=95.7

Q ss_pred             eceEEEEEeccCCCCCCEEEeCCCCCCCCCCCCccEEEEEEEecCCccccccccceee--eccCHHHHhCCCEEEEEecC
Q 016833          183 EKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVE--HTLSLTEALCGFQFVITHLD  260 (382)
Q Consensus       183 ~~~~l~V~Ip~G~~~g~~i~~~geG~~~~g~~~GDl~v~i~~k~h~~F~R~g~DL~~~--~~I~l~eAl~G~~~~i~tld  260 (382)
                      ....+.+.+.+++..|+.+.+..+|+..++..|-++++++..++|..|.|.+.+|...  ..|++.+|++|....+++++
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~~~~~~~~~~~  277 (306)
T KOG0714|consen  198 RSRYLSISIKPGWKEGTKITFPEEGDEEPGILPADIEFVVDEKPHPLFSRDGNDLSYSSGYEISLKEALLGVTVFVPTLD  277 (306)
T ss_pred             ccceeEEeccCCcccccceeccccccccCCcCcceeEEEEecCCcccccCCCccceecccceeehhhhhcCcceeeeccc
Confidence            4677889999999999999999999988888899999999999999999999999999  99999999999999999999


Q ss_pred             CcEEEEEeCCCccccCCcEEEEcCCCCCC
Q 016833          261 GRQLLIKSQPGEVVKPDQFKAINDEGMPM  289 (382)
Q Consensus       261 G~~l~i~~p~g~vi~~g~~~~i~g~GmP~  289 (382)
                      ++.+.+.+.. .++.++...+++++|||.
T Consensus       278 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  305 (306)
T KOG0714|consen  278 GRSYSLSINK-DLIEPGEEDVIPGEGLPC  305 (306)
T ss_pred             CccccCcccc-cccCCCceeeecCCCCCC
Confidence            9866554332 678999999999999985

>PRK10767 chaperone protein DnaJ; Provisional

Probab=99.60  E-value=1.6e-15  Score=151.70  Aligned_cols=132  Identities=21%  Similarity=0.481  Sum_probs=94.4

Q ss_pred             cccCcceeEEeeceeeeCCCCCCCCccC---C---CcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCC
Q 016833           96 DLYNGTSKKLSLSRNVICTKCKGKGSKS---G---ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDK  169 (382)
Q Consensus        96 e~~~G~~~~i~~~r~~~C~~C~G~G~~~---~---~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k  169 (382)
                      ..|.|....- -.....|+.|+|+|...   +   ...+|+.|+|+|.++             ..+|+.|+|+|.+...+
T Consensus       146 ~~C~G~G~~~-~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~-------------~~~C~~C~G~g~v~~~~  211 (371)
T PRK10767        146 DTCHGSGAKP-GTSPKTCPTCHGAGQVRMQQGFFTVQQTCPTCHGRGKII-------------KDPCKKCHGQGRVEKEK  211 (371)
T ss_pred             CCCCCcccCC-CCCCccCCCCCCeeEEEEeeceEEEEEeCCCCCCceeEC-------------CCCCCCCCCCceEeeee
Confidence            4567766542 23346899999999643   1   235899999999865             57799999999875432


Q ss_pred             CC---------------------C-C--------------------------------------CCCCceEE-EeceEEE
Q 016833          170 DR---------------------C-P--------------------------------------QCKGEKVI-QEKKVLE  188 (382)
Q Consensus       170 ~~---------------------C-~--------------------------------------~C~G~g~~-~~~~~l~  188 (382)
                      ..                     - .                                      .+.+.-.+ .-...++
T Consensus       212 ~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~i~  291 (371)
T PRK10767        212 TLSVKIPAGVDTGDRIRLSGEGEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLDGRVK  291 (371)
T ss_pred             eEEEecCCCCCCCcEEEEecCccCCCCCCCCcCEEEEEEEeeCCCEEEecCCEEEEEEeCHHHHhCCCeEEEecCCCcEE
Confidence            22                     0 0                                      00011111 0113589


Q ss_pred             EEeccCCCCCCEEEeCCCCCCCC-CCCCccEEEEEEEecCCccccccccceeee
Q 016833          189 VIVEKGMQNGQKITFPGEADEAP-DTVTGDIVFVLQQKEHPKFKRKGDDLFVEH  241 (382)
Q Consensus       189 V~Ip~G~~~g~~i~~~geG~~~~-g~~~GDl~v~i~~k~h~~F~R~g~DL~~~~  241 (382)
                      |.||+|+++|++++|+|+|.+.+ +...|||||.|++..|+.|++++.+|+.++
T Consensus       292 v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~~~~ll~~l  345 (371)
T PRK10767        292 LKIPEGTQTGKLFRLRGKGVKSVRSGARGDLYCQVVVETPVNLTKRQKELLEEF  345 (371)
T ss_pred             EEeCCCCCCCCEEEECCCCcCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence            99999999999999999999854 346799999999999999999998887754

>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation

Probab=99.56  E-value=5.9e-15  Score=111.50  Aligned_cols=65  Identities=43%  Similarity=0.945  Sum_probs=53.8

Q ss_pred             CCCCCCCCccCCCc-ccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCCCce
Q 016833          113 CTKCKGKGSKSGAS-MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEK  179 (382)
Q Consensus       113 C~~C~G~G~~~~~~-~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~G~g  179 (382)
                      |+.|+|+|++++.. .+|+.|+|+|+++..++ .|+++++++.+|+.|+|+|+++ ++++|+.|+|+|
T Consensus         1 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~-~~~~~~~~~~~C~~C~G~G~~i-~~~~C~~C~G~g   66 (66)
T PF00684_consen    1 CPKCNGTGAKPGKKPKTCPQCNGSGQVTRRQQ-TPGGVFQMQQTCPKCGGTGKII-EKDPCKTCKGSG   66 (66)
T ss_dssp             -CCCTTTSB-STTT-EE-TTSSSSSEEEEEEE-SSSTTEEEEEE-TTTSSSSEE--TSSB-SSSTTSS
T ss_pred             CCcCCCcccCCCCCCcCCcCCCCeeEEEEEEe-CCCeEEEEEEECCCCcceeeEE-CCCCCCCCCCcC
Confidence            89999999977654 89999999999999888 7778889999999999999999 779999999975

DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.

>PRK14282 chaperone protein DnaJ; Provisional

Probab=99.45  E-value=2.9e-13  Score=135.28  Aligned_cols=132  Identities=20%  Similarity=0.330  Sum_probs=96.5

Q ss_pred             cccCcceeEEeeceeeeCCCCCCCCccC-------C---CcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEE
Q 016833           96 DLYNGTSKKLSLSRNVICTKCKGKGSKS-------G---ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGET  165 (382)
Q Consensus        96 e~~~G~~~~i~~~r~~~C~~C~G~G~~~-------~---~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~  165 (382)
                      ..|.|+..+ .-.....|+.|+|+|...       +   ...+|+.|+|+|.++             ..+|+.|+|+|.+
T Consensus       156 ~~C~G~G~~-~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~-------------~~~C~~C~G~g~v  221 (369)
T PRK14282        156 PHCGGTGVE-PGSGYVTCPKCHGTGRIREERRSFFGVFVSERTCERCGGTGKIP-------------GEYCHECGGSGRI  221 (369)
T ss_pred             CCCCccCCC-CCCCCcCCCCCCCcCEEEEEEEccCcceEEEEECCCCCCcceeC-------------CCCCCCCCCceeE
Confidence            567777655 223457899999999653       1   135899999999865             6789999999975


Q ss_pred             ecCCCC-----CC-------------------------------------------------------CCCCceEEEe--
Q 016833          166 INDKDR-----CP-------------------------------------------------------QCKGEKVIQE--  183 (382)
Q Consensus       166 ~~~k~~-----C~-------------------------------------------------------~C~G~g~~~~--  183 (382)
                      ...+..     -.                                                       .+.+...+..  
T Consensus       222 ~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~i~i~v~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ld  301 (369)
T PRK14282        222 RRRVRTTVKIPAGVEDGTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTVEVPLPE  301 (369)
T ss_pred             EEEEEEEEEeCCCCCCCCEEEEecccCCCCCCCCCCCEEEEEEEecCCcEEEecCCEEEEEEeCHHHHhCCCEEEEeCCC
Confidence            542221     00                                                       0111111111  


Q ss_pred             ceEEEEEeccCCCCCCEEEeCCCCCCCC-CCCCccEEEEEEEecCCccccccccceeee
Q 016833          184 KKVLEVIVEKGMQNGQKITFPGEADEAP-DTVTGDIVFVLQQKEHPKFKRKGDDLFVEH  241 (382)
Q Consensus       184 ~~~l~V~Ip~G~~~g~~i~~~geG~~~~-g~~~GDl~v~i~~k~h~~F~R~g~DL~~~~  241 (382)
                      .+.++|.||+|+++|++|+|+|+|++.+ +..+|||||+|+++.|+.|++++.+|+.++
T Consensus       302 G~~i~v~Ip~g~~~g~~iri~GkG~p~~~~~~~GDL~V~~~v~~P~~l~~~~~~ll~~l  360 (369)
T PRK14282        302 GGTTMLKIPPGTQPETVFRLKGKGLPNMRYGRRGDLIVNVHVEIPKRLSREERKLLKEL  360 (369)
T ss_pred             CcEEEEEeCCCcCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence            1568999999999999999999999854 456899999999999999999998887653

>PRK14300 chaperone protein DnaJ; Provisional

Probab=99.43  E-value=3.7e-13  Score=134.62  Aligned_cols=126  Identities=21%  Similarity=0.498  Sum_probs=90.1

Q ss_pred             cccCcceeEEeeceeeeCCCCCCCCccC---C---CcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCC
Q 016833           96 DLYNGTSKKLSLSRNVICTKCKGKGSKS---G---ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDK  169 (382)
Q Consensus        96 e~~~G~~~~i~~~r~~~C~~C~G~G~~~---~---~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k  169 (382)
                      ..|.|...+ .-.....|+.|+|+|...   +   ...+|+.|+|+|.++             ..+|+.|+|+|.+...+
T Consensus       149 ~~C~G~g~~-~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~-------------~~~C~~C~G~g~v~~~~  214 (372)
T PRK14300        149 DTCHGSGSE-KGETVTTCDACSGVGATRMQQGFFTIEQACHKCQGNGQII-------------KNPCKKCHGMGRYHKQR  214 (372)
T ss_pred             CCCCCcccC-CCCCCccCCCccCeEEEEEeeceEEEEEeCCCCCccceEe-------------CCCCCCCCCceEEEeeE
Confidence            456777654 233457899999999753   1   235899999999875             67899999999875432


Q ss_pred             CC---------------------C---------------------------------------CCCCCceEEEe--ceEE
Q 016833          170 DR---------------------C---------------------------------------PQCKGEKVIQE--KKVL  187 (382)
Q Consensus       170 ~~---------------------C---------------------------------------~~C~G~g~~~~--~~~l  187 (382)
                      ..                     .                                       ..+.++..+..  .+.+
T Consensus       215 ~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~Dl~~~~~Isl~~Al~G~~~~i~~ldg~~i  294 (372)
T PRK14300        215 NLSVNIPAGVENGTRIRHTGEGEAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIEGGKV  294 (372)
T ss_pred             EEEEEECCCCCCCcEEEEeccccCCCCCCCCCCEEEEEEECCCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCCCEE
Confidence            22                     0                                       01112222222  1579


Q ss_pred             EEEeccCCCCCCEEEeCCCCCCCC-CCCCccEEEEEEEecCCccccccc
Q 016833          188 EVIVEKGMQNGQKITFPGEADEAP-DTVTGDIVFVLQQKEHPKFKRKGD  235 (382)
Q Consensus       188 ~V~Ip~G~~~g~~i~~~geG~~~~-g~~~GDl~v~i~~k~h~~F~R~g~  235 (382)
                      +|+||+|+++|++|+|+|+|++.+ +..+|||||+|+++.|..|+-+..
T Consensus       295 ~v~Ip~g~~~g~~iri~g~G~p~~~~~~~GDL~V~~~v~~P~~ls~~qk  343 (372)
T PRK14300        295 NLTIPAGTQNGDQLRLRSKGMSKMRSTIRGDMLTHIHVEVPKNLSKRQR  343 (372)
T ss_pred             EEEECCccCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHH
Confidence            999999999999999999999865 356899999999999976554443

>PRK14294 chaperone protein DnaJ; Provisional

Probab=99.38  E-value=8e-13  Score=132.00  Aligned_cols=133  Identities=21%  Similarity=0.423  Sum_probs=96.4

Q ss_pred             cccCcceeEEeeceeeeCCCCCCCCccCC------CcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCC
Q 016833           96 DLYNGTSKKLSLSRNVICTKCKGKGSKSG------ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDK  169 (382)
Q Consensus        96 e~~~G~~~~i~~~r~~~C~~C~G~G~~~~------~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k  169 (382)
                      ..|.|....- -.....|+.|+|+|....      ...+|+.|+|+|..+             ..+|+.|+|+|.+...+
T Consensus       148 ~~C~G~G~~~-~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~-------------~~~C~~C~G~g~v~~~~  213 (366)
T PRK14294        148 EECHGSGCEP-GTSPTTCPQCGGSGQVTQSQGFFSIRTTCPRCRGMGKVI-------------VSPCKTCHGQGRVRVSK  213 (366)
T ss_pred             CCCCCccccC-CCCcccCCCcCCeEEEEEEeeeEEEEeeCCCCCCcCeec-------------CcCCCCCCCceEeecce
Confidence            4567766542 233578999999997531      236899999999865             67899999999875533


Q ss_pred             CC-----CC-------------------------------------------------------CCCCceEEE-eceEEE
Q 016833          170 DR-----CP-------------------------------------------------------QCKGEKVIQ-EKKVLE  188 (382)
Q Consensus       170 ~~-----C~-------------------------------------------------------~C~G~g~~~-~~~~l~  188 (382)
                      ..     -.                                                       .+.+...+. -...++
T Consensus       214 ~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~  293 (366)
T PRK14294        214 TVQVKIPAGVDTGSRLRLRGEGEAGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTLEGERE  293 (366)
T ss_pred             eEEEecCCCCcCCcEEEEccCccCCCCCCCCCcEEEEEEEccCCcceecCCCEEEEEEeCHHHHhCCCeEEEECCCCcEE
Confidence            22     00                                                       011111111 114469


Q ss_pred             EEeccCCCCCCEEEeCCCCCCCCC-CCCccEEEEEEEecCCccccccccceeeec
Q 016833          189 VIVEKGMQNGQKITFPGEADEAPD-TVTGDIVFVLQQKEHPKFKRKGDDLFVEHT  242 (382)
Q Consensus       189 V~Ip~G~~~g~~i~~~geG~~~~g-~~~GDl~v~i~~k~h~~F~R~g~DL~~~~~  242 (382)
                      |.||+|+++|++|+|+|+|++.++ ..+|||||+|++..|+.|+++..+|+..+.
T Consensus       294 v~ip~g~~~g~~iri~G~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll~~~~  348 (366)
T PRK14294        294 LKIPKGTQPGDIFRFKGKGIPSLRGGGRGDQIIEVEVKVPTRLTKKQEELLTEFA  348 (366)
T ss_pred             EEECCCcCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence            999999999999999999998654 468999999999999999999888877643

>PRK14290 chaperone protein DnaJ; Provisional

Probab=99.38  E-value=7.5e-13  Score=132.14  Aligned_cols=131  Identities=23%  Similarity=0.478  Sum_probs=97.3

Q ss_pred             cccCcceeEEeeceeeeCCCCCCCCccC-----C-----CcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEE
Q 016833           96 DLYNGTSKKLSLSRNVICTKCKGKGSKS-----G-----ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGET  165 (382)
Q Consensus        96 e~~~G~~~~i~~~r~~~C~~C~G~G~~~-----~-----~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~  165 (382)
                      ..|.|....-.  ....|+.|+|+|...     +     ...+|+.|+|+|.++             +.+|+.|+|+|.+
T Consensus       153 ~~C~G~g~~~~--~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~~-------------~~~C~~C~G~g~v  217 (365)
T PRK14290        153 PDCSGTGAKNG--KLITCPTCHGTGQQRIVRGQGFFRMVTVTTCRTCGGRGRIP-------------EEKCPRCNGTGTV  217 (365)
T ss_pred             CCCccccCCCC--CCccCCCCCCcCEEEEEeccCeEEEEEEEeCCCCCCceeEc-------------cCCCCCCCCceeE
Confidence            45777765432  457899999999642     1     135899999999864             6789999999987


Q ss_pred             ecCCCC---------------------C-------------------------------------CCCCCceEEE-eceE
Q 016833          166 INDKDR---------------------C-------------------------------------PQCKGEKVIQ-EKKV  186 (382)
Q Consensus       166 ~~~k~~---------------------C-------------------------------------~~C~G~g~~~-~~~~  186 (382)
                      ...+..                     .                                     ..|.+...+. ....
T Consensus       218 ~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~GDL~v~v~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~~~~g~  297 (365)
T PRK14290        218 VVNEDISVKIPKGATDNLRLRVKGKGQSYGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEIEIKLFREK  297 (365)
T ss_pred             EEeeEEEEEECCCCCCCcEEEEccccCCCCCCCCCEEEEEEEcCCCCEEEecCCEEEEEEeCHHHHhCCCEEEEEcCCce
Confidence            553322                     0                                     0111111111 1256


Q ss_pred             EEEEeccCCCCCCEEEeCCCCCCCCC-CCCccEEEEEEEecCCccccccccceeee
Q 016833          187 LEVIVEKGMQNGQKITFPGEADEAPD-TVTGDIVFVLQQKEHPKFKRKGDDLFVEH  241 (382)
Q Consensus       187 l~V~Ip~G~~~g~~i~~~geG~~~~g-~~~GDl~v~i~~k~h~~F~R~g~DL~~~~  241 (382)
                      ++|.||+|+++|++|+|+|+|++.++ ..+|||||+|+++.|+.|++++.+|+.++
T Consensus       298 i~V~Ip~g~~~g~~iri~g~G~p~~~~~~~GDL~V~~~V~~P~~l~~~~~~ll~~~  353 (365)
T PRK14290        298 YNLKIPEGTQPGEVLKIKGAGMPHLNGHGSGDLLVRINVEVPKRLTSKQKELIREF  353 (365)
T ss_pred             EEEEECCccCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence            89999999999999999999998654 46899999999999999999999988764

>PRK14298 chaperone protein DnaJ; Provisional

Probab=99.36  E-value=7.6e-13  Score=132.56  Aligned_cols=132  Identities=20%  Similarity=0.394  Sum_probs=95.1

Q ss_pred             cccCcceeEEeeceeeeCCCCCCCCccC-------C---CcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEE
Q 016833           96 DLYNGTSKKLSLSRNVICTKCKGKGSKS-------G---ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGET  165 (382)
Q Consensus        96 e~~~G~~~~i~~~r~~~C~~C~G~G~~~-------~---~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~  165 (382)
                      ..|.|...+- -.....|+.|+|+|...       +   ...+|+.|+|+|.++             ..+|+.|+|+|.+
T Consensus       145 ~~C~G~G~~~-~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~-------------~~~C~~C~G~g~v  210 (377)
T PRK14298        145 STCSGTGAKP-GTSPKRCPTCGGTGQVTTTRSTPLGQFVTTTTCSTCHGRGQVI-------------ESPCPVCSGTGKV  210 (377)
T ss_pred             CCCCCCcccC-CCCCCcCCCCCCccEEEEEEecCceeEEEEEeCCCCCCCCccc-------------CCCCCCCCCccEE
Confidence            5667776652 23457899999999642       1   236899999999865             5789999999987


Q ss_pred             ecCCCC-----CC-------------------------------------------------------CCCCceEEE-ec
Q 016833          166 INDKDR-----CP-------------------------------------------------------QCKGEKVIQ-EK  184 (382)
Q Consensus       166 ~~~k~~-----C~-------------------------------------------------------~C~G~g~~~-~~  184 (382)
                      ...+..     -.                                                       .|.+.-.+. -.
T Consensus       211 ~~~~~l~V~IppG~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tld  290 (377)
T PRK14298        211 RKTRKITVNVPAGADSGLRLKLSGEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPTLY  290 (377)
T ss_pred             EEEEEEEecCCCCCCCCCEEEEecccCCCCCCCCCcCEEEEEEEecCCCeEEEcCcEEEEEEeCHHHHhCCCeEEEecCC
Confidence            543222     00                                                       011111111 11


Q ss_pred             eEEEEEeccCCCCCCEEEeCCCCCCCC-CCCCccEEEEEEEecCCccccccccceeee
Q 016833          185 KVLEVIVEKGMQNGQKITFPGEADEAP-DTVTGDIVFVLQQKEHPKFKRKGDDLFVEH  241 (382)
Q Consensus       185 ~~l~V~Ip~G~~~g~~i~~~geG~~~~-g~~~GDl~v~i~~k~h~~F~R~g~DL~~~~  241 (382)
                      ..++|.||+|+++|++++|+|+|.+.+ +...|||||+|++..|+.|++++.+|+.++
T Consensus       291 G~i~v~ip~g~~~g~~lri~g~G~p~~~~~~~GDL~V~~~V~~P~~ls~~~~~ll~~l  348 (377)
T PRK14298        291 GKVKMNIPPGTQTHSVFRLKDKGMPRLHGHGKGDQLVKVIVKTPTKLTQEQKELLREF  348 (377)
T ss_pred             CCEEEEeCCCcccCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence            347999999999999999999999854 345799999999999999999988887654

>PRK14285 chaperone protein DnaJ; Provisional

Probab=99.35  E-value=2e-12  Score=128.97  Aligned_cols=131  Identities=22%  Similarity=0.452  Sum_probs=95.3

Q ss_pred             cccCcceeEEeeceeeeCCCCCCCCccCC------CcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCC
Q 016833           96 DLYNGTSKKLSLSRNVICTKCKGKGSKSG------ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDK  169 (382)
Q Consensus        96 e~~~G~~~~i~~~r~~~C~~C~G~G~~~~------~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k  169 (382)
                      ..|+|+..+ .-.....|+.|+|+|....      ...+|+.|+|+|.++             ..+|..|+|+|.+...+
T Consensus       150 ~~C~G~G~~-~~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~-------------~~~C~~C~G~g~v~~~~  215 (365)
T PRK14285        150 ESCLGKKSE-KGTSPSICNMCNGSGRVMQGGGFFRVTTTCPKCYGNGKII-------------SNPCKSCKGKGSLKKKE  215 (365)
T ss_pred             CCCCCcccC-CCCCCccCCCccCceeEEecCceeEEeeecCCCCCccccc-------------CCCCCCCCCCCEEeccE
Confidence            567787755 2334578999999996531      236899999999865             67899999999775432


Q ss_pred             CC-----CC-------------------------------------------------------CCCCceEEEe--ceEE
Q 016833          170 DR-----CP-------------------------------------------------------QCKGEKVIQE--KKVL  187 (382)
Q Consensus       170 ~~-----C~-------------------------------------------------------~C~G~g~~~~--~~~l  187 (382)
                      ..     -.                                                       .+.+.-.+..  .+.+
T Consensus       216 ~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~dL~~~~~Isl~eAl~G~~~~i~tldG~~v  295 (365)
T PRK14285        216 TIELKIPAGIDDNQQIKMRGKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQTIASKKI  295 (365)
T ss_pred             EEEEEECCCCCCCCEEEEeeccccCCCCCCCCCEEEEEEEecCCCeEEeccceEEEEecCHHHHhCCCEEEEECCCCCEE
Confidence            22     00                                                       0111111111  1579


Q ss_pred             EEEeccCCCCCCEEEeCCCCCCCCCC-CCccEEEEEEEecCCccccccccceee
Q 016833          188 EVIVEKGMQNGQKITFPGEADEAPDT-VTGDIVFVLQQKEHPKFKRKGDDLFVE  240 (382)
Q Consensus       188 ~V~Ip~G~~~g~~i~~~geG~~~~g~-~~GDl~v~i~~k~h~~F~R~g~DL~~~  240 (382)
                      +|+||+|+++|++|+|+|+|++.++. ..|||||+|+++.|+.|++++..|+-.
T Consensus       296 ~V~Ip~g~~~g~~irl~GkG~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~~l~~  349 (365)
T PRK14285        296 KIKIPKGTENDEQIIIKNEGMPILHTEKFGNLILIIKIKTPKNLNSNAIKLLEN  349 (365)
T ss_pred             EEEeCCCcCCCcEEEECCCCccCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence            99999999999999999999986544 469999999999999999888766554

>PRK14277 chaperone protein DnaJ; Provisional

Probab=99.33  E-value=3.1e-12  Score=128.64  Aligned_cols=125  Identities=26%  Similarity=0.483  Sum_probs=85.8

Q ss_pred             cccCcceeEEeeceeeeCCCCCCCCccC-------C---CcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEE
Q 016833           96 DLYNGTSKKLSLSRNVICTKCKGKGSKS-------G---ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGET  165 (382)
Q Consensus        96 e~~~G~~~~i~~~r~~~C~~C~G~G~~~-------~---~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~  165 (382)
                      ..|.|.... .-.....|+.|+|+|...       +   ...+|+.|+|+|.++             ..+|+.|+|+|.+
T Consensus       159 ~~C~G~G~~-~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~-------------~~~C~~C~G~g~v  224 (386)
T PRK14277        159 DVCKGSGAK-PGSKPVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCHGEGKII-------------TDPCNKCGGTGRI  224 (386)
T ss_pred             CCCCCCCcC-CCCCCccCCCCCCEEEEEEEEeccCceEEEEEECCCCCcceeec-------------cCCCCCCCCCcEE
Confidence            456777655 223457899999999653       1   125899999999875             5789999999987


Q ss_pred             ecCCCC---------------------C-C--------------------------------------CCCCceEEEe-c
Q 016833          166 INDKDR---------------------C-P--------------------------------------QCKGEKVIQE-K  184 (382)
Q Consensus       166 ~~~k~~---------------------C-~--------------------------------------~C~G~g~~~~-~  184 (382)
                      ...+..                     . .                                      .|.+.-.+.. .
T Consensus       225 ~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tld  304 (386)
T PRK14277        225 RRRRKIKVNIPAGIDDGQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDAALGGEIEIPTLD  304 (386)
T ss_pred             eeeeEEEEecCCCccCCcEEEEccccccCCCCCCCccEEEEEEEecCCCeEEecCCEEEEEEcCHHHHhCCCEEEEEcCC
Confidence            543222                     0 0                                      0111111110 1


Q ss_pred             eEEEEEeccCCCCCCEEEeCCCCCCCCC-CCCccEEEEEEEecCCcccccc
Q 016833          185 KVLEVIVEKGMQNGQKITFPGEADEAPD-TVTGDIVFVLQQKEHPKFKRKG  234 (382)
Q Consensus       185 ~~l~V~Ip~G~~~g~~i~~~geG~~~~g-~~~GDl~v~i~~k~h~~F~R~g  234 (382)
                      ..++|.||+|+++|++++|+|+|.+.++ ...|||||+|++.-+..++-+.
T Consensus       305 G~~~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~V~~P~~Ls~~q  355 (386)
T PRK14277        305 GKVKFTIPEGTQTGTKFRLRGKGIPHLRGRGRGDQIVKVYIEVPKKLTEKQ  355 (386)
T ss_pred             CCEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEeCCCCCHHH
Confidence            3379999999999999999999997543 4579999999998776544433

>PRK14279 chaperone protein DnaJ; Provisional

Probab=99.32  E-value=3.9e-12  Score=128.05  Aligned_cols=125  Identities=22%  Similarity=0.454  Sum_probs=89.9

Q ss_pred             cccCcceeEEeeceeeeCCCCCCCCccCC------CcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCC
Q 016833           96 DLYNGTSKKLSLSRNVICTKCKGKGSKSG------ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDK  169 (382)
Q Consensus        96 e~~~G~~~~i~~~r~~~C~~C~G~G~~~~------~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k  169 (382)
                      ..|.|...+- -.....|+.|+|+|....      ...+|+.|+|+|.++             ..+|..|+|+|.+...+
T Consensus       177 ~~C~G~G~~~-~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~i-------------~~~C~~C~G~g~v~~~~  242 (392)
T PRK14279        177 TTCHGSGARP-GTSPKVCPTCNGSGVISRNQGAFGFSEPCTDCRGTGSII-------------EDPCEECKGTGVTTRTR  242 (392)
T ss_pred             CCCccccccC-CCCCCCCCCCcceEEEEEEecceEEEEecCCCCceeEEe-------------CCcCCCCCCCeEEEEee
Confidence            5677877653 234578999999997531      236899999999975             67899999999875433


Q ss_pred             CC---------------------C-C--------------------------------------CCCCceEEE-eceEEE
Q 016833          170 DR---------------------C-P--------------------------------------QCKGEKVIQ-EKKVLE  188 (382)
Q Consensus       170 ~~---------------------C-~--------------------------------------~C~G~g~~~-~~~~l~  188 (382)
                      ..                     - .                                      .|.++..+. -...++
T Consensus       243 ~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~~ldg~i~  322 (392)
T PRK14279        243 TINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGPVG  322 (392)
T ss_pred             eeEEEeCCCCCCCcEEEEeCCccCCCCCCCCCCEEEEEEEecCCcceeecCcEEEEEEccHHHHcCCceEEEEcCCceEE
Confidence            22                     0 0                                      011111111 114589


Q ss_pred             EEeccCCCCCCEEEeCCCCCCCCCCCCccEEEEEEEecCCcccccc
Q 016833          189 VIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKG  234 (382)
Q Consensus       189 V~Ip~G~~~g~~i~~~geG~~~~g~~~GDl~v~i~~k~h~~F~R~g  234 (382)
                      |+||+|+++|++|+|+|+|++.++...|||||+|++..+..+..+.
T Consensus       323 v~Ip~g~~~g~~iri~g~G~p~~~~~~GDL~I~~~v~~P~~Ls~~q  368 (392)
T PRK14279        323 VKVPAGTADGRILRVRGRGVPKRSGGAGDLLVTVKVAVPPNLDGAA  368 (392)
T ss_pred             EEECCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCHHH
Confidence            9999999999999999999986666789999999999886544333

>PRK14301 chaperone protein DnaJ; Provisional

Probab=99.29  E-value=4.5e-12  Score=126.89  Aligned_cols=131  Identities=21%  Similarity=0.439  Sum_probs=92.8

Q ss_pred             cccCcceeEEeeceeeeCCCCCCCCccCC------CcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCC
Q 016833           96 DLYNGTSKKLSLSRNVICTKCKGKGSKSG------ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDK  169 (382)
Q Consensus        96 e~~~G~~~~i~~~r~~~C~~C~G~G~~~~------~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k  169 (382)
                      ..|.|...+ .-.....|+.|+|+|....      ...+|+.|+|+|.++             ..+|+.|+|+|.+...+
T Consensus       148 ~~C~G~G~~-~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~-------------~~~C~~C~G~g~v~~~~  213 (373)
T PRK14301        148 DDCGGSGAA-PGTSPETCRHCGGSGQVRQSQGFFQIAVPCPVCRGEGRVI-------------THPCPKCKGSGIVQQTR  213 (373)
T ss_pred             CCCCCcccC-CCCCCcccCCccCeeEEEEEeeeEEEEEeCCCCCceeeec-------------CCCCCCCCCCceeccce
Confidence            566777655 2234578999999996531      236899999999875             57899999999875433


Q ss_pred             CC----------------------CC--------------------------------------CCCCceEEE-eceEEE
Q 016833          170 DR----------------------CP--------------------------------------QCKGEKVIQ-EKKVLE  188 (382)
Q Consensus       170 ~~----------------------C~--------------------------------------~C~G~g~~~-~~~~l~  188 (382)
                      ..                      -.                                      .+.+.-.+. -...++
T Consensus       214 ~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDLiv~i~v~~h~~f~r~G~DL~~~~~Isl~eAl~G~~~~v~tldG~i~  293 (373)
T PRK14301        214 ELKVRIPAGVDTGSRLRLRGEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDDPVT  293 (373)
T ss_pred             EEEEEeCCCCcCCCEEEEeccccCCCCCCCCcCEEEEEEEEECCCceeecCcEEEEEEecHHHHhCCCeEEEecCCccEE
Confidence            22                      00                                      011111111 114489


Q ss_pred             EEeccCCCCCCEEEeCCCCCCCCC-CCCccEEEEEEEecCCccccccccceee
Q 016833          189 VIVEKGMQNGQKITFPGEADEAPD-TVTGDIVFVLQQKEHPKFKRKGDDLFVE  240 (382)
Q Consensus       189 V~Ip~G~~~g~~i~~~geG~~~~g-~~~GDl~v~i~~k~h~~F~R~g~DL~~~  240 (382)
                      |+||+|+++|++++|+|+|.+.++ ...|||||+|++..|+.++.+..+|+..
T Consensus       294 v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~I~~~V~~P~~l~~~q~~~l~~  346 (373)
T PRK14301        294 LDIPKGTQSGEVFRLRGKGLPYLGSSQKGDLLVEVSVVTPTKLTKRQEELLRE  346 (373)
T ss_pred             EEECCCcCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence            999999999999999999998654 4579999999999998777666555543

>PRK14284 chaperone protein DnaJ; Provisional

Probab=99.29  E-value=5.8e-12  Score=126.88  Aligned_cols=131  Identities=20%  Similarity=0.452  Sum_probs=94.3

Q ss_pred             cccCcceeEEeeceeeeCCCCCCCCccCC------CcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCC
Q 016833           96 DLYNGTSKKLSLSRNVICTKCKGKGSKSG------ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDK  169 (382)
Q Consensus        96 e~~~G~~~~i~~~r~~~C~~C~G~G~~~~------~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k  169 (382)
                      ..|+|+..+.. .....|+.|+|+|....      ...+|+.|+|+|.++             ..+|+.|+|+|.+...+
T Consensus       162 ~~C~G~G~~~~-~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~-------------~~~C~~C~G~g~v~~~~  227 (391)
T PRK14284        162 DACSGSGANSS-QGIKVCDRCKGSGQVVQSRGFFSMASTCPECGGEGRVI-------------TDPCSVCRGQGRIKDKR  227 (391)
T ss_pred             CCCcccccCCC-CCCeecCccCCeeEEEEEeceEEEEEECCCCCCCCccc-------------CCcCCCCCCcceecceE
Confidence            56777776533 33578999999997431      236899999999865             57899999999875432


Q ss_pred             CC------------------------------------------------------------CCCCCCceEEEe---ceE
Q 016833          170 DR------------------------------------------------------------CPQCKGEKVIQE---KKV  186 (382)
Q Consensus       170 ~~------------------------------------------------------------C~~C~G~g~~~~---~~~  186 (382)
                      ..                                                            =..+.+...+..   ...
T Consensus       228 ~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tld~g~~  307 (391)
T PRK14284        228 SVHVHIPAGVDSGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAALGMKKEIPTLLKEGT  307 (391)
T ss_pred             EEEEEECCCCCCCCEEEEeccccCCCCCCCCCCEEEEEEEecCCCceeecCCEEEEEEecHHHHhCCCeEEEeecCCCcE
Confidence            22                                                            001112222321   257


Q ss_pred             EEEEeccCCCCCCEEEeCCCCCCCC-CCCCccEEEEEEEecCCccccccccceee
Q 016833          187 LEVIVEKGMQNGQKITFPGEADEAP-DTVTGDIVFVLQQKEHPKFKRKGDDLFVE  240 (382)
Q Consensus       187 l~V~Ip~G~~~g~~i~~~geG~~~~-g~~~GDl~v~i~~k~h~~F~R~g~DL~~~  240 (382)
                      ++|+||+|+++|++++|+|+|++.+ +..+|||||+|++..++.++.+...|+..
T Consensus       308 i~v~Ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll~~  362 (391)
T PRK14284        308 CRLTIPEGIQSGTILKVRGQGFPNVHGKGRGDLLVRISVETPQNLSEEQKELLRQ  362 (391)
T ss_pred             EEEEECCccCCCeEEEECCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHH
Confidence            8999999999999999999999855 35689999999999998877766655543

>PRK14278 chaperone protein DnaJ; Provisional

Probab=99.28  E-value=9.8e-12  Score=124.67  Aligned_cols=124  Identities=23%  Similarity=0.459  Sum_probs=88.7

Q ss_pred             cccCcceeEEeeceeeeCCCCCCCCccC-------C---CcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEE
Q 016833           96 DLYNGTSKKLSLSRNVICTKCKGKGSKS-------G---ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGET  165 (382)
Q Consensus        96 e~~~G~~~~i~~~r~~~C~~C~G~G~~~-------~---~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~  165 (382)
                      +.|.|...+ .-.....|+.|+|+|...       +   ...+|+.|+|+|.++             ..+|+.|+|+|.+
T Consensus       143 ~~C~G~G~~-~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~-------------~~~C~~C~G~g~v  208 (378)
T PRK14278        143 DRCHGKGTA-GDSKPVTCDTCGGRGEVQTVQRSFLGQVMTSRPCPTCRGVGEVI-------------PDPCHECAGDGRV  208 (378)
T ss_pred             CCCcCccCC-CCCCceecCCccCceEEEEEEeccceeEEEEEECCCCCccceee-------------CCCCCCCCCceeE
Confidence            567777655 233457899999999642       1   135899999999875             5679999999987


Q ss_pred             ecCCCC------------------------------------------------------------CCCCCCceEEEe--
Q 016833          166 INDKDR------------------------------------------------------------CPQCKGEKVIQE--  183 (382)
Q Consensus       166 ~~~k~~------------------------------------------------------------C~~C~G~g~~~~--  183 (382)
                      ...+..                                                            =..|.+.-.+..  
T Consensus       209 ~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tld  288 (378)
T PRK14278        209 RARREITVKIPAGVGDGMRIRLAAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVTVEAIL  288 (378)
T ss_pred             ecceEEEEEECCCCCCCcEEEEccCcCCCCCCCCCCCEEEEEEECcCCCEEEcCCCEEEEEecCHHHHhcCCeEEEecCC
Confidence            543322                                                            001112222221  


Q ss_pred             ceEEEEEeccCCCCCCEEEeCCCCCCCC-CCCCccEEEEEEEecCCccccc
Q 016833          184 KKVLEVIVEKGMQNGQKITFPGEADEAP-DTVTGDIVFVLQQKEHPKFKRK  233 (382)
Q Consensus       184 ~~~l~V~Ip~G~~~g~~i~~~geG~~~~-g~~~GDl~v~i~~k~h~~F~R~  233 (382)
                      .+.++|.||+|+++|++++|+|+|++.+ +...|||||+|++.-+..+..+
T Consensus       289 ~~~i~v~ip~g~~~g~~lrl~g~G~p~~~~~~~GDL~V~~~V~~P~~Ls~~  339 (378)
T PRK14278        289 DGPSEITIPPGTQPGSVITLRGRGMPHLRSGGRGDLHAHVEVVVPTRLDHE  339 (378)
T ss_pred             CCeEEEEeCCCcCCCcEEEECCCCCCCCCCCCCCCEEEEEEEEcCCCCCHH
Confidence            3678999999999999999999999854 3467999999999977654433

>PRK14288 chaperone protein DnaJ; Provisional

Probab=99.28  E-value=1.2e-11  Score=123.66  Aligned_cols=128  Identities=23%  Similarity=0.466  Sum_probs=90.4

Q ss_pred             ccccCcceeEEeeceeeeCCCCCCCCccC---C---CcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecC
Q 016833           95 EDLYNGTSKKLSLSRNVICTKCKGKGSKS---G---ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETIND  168 (382)
Q Consensus        95 ee~~~G~~~~i~~~r~~~C~~C~G~G~~~---~---~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~  168 (382)
                      -+.|.|...+-  .....|+.|+|+|...   +   ...+|+.|+|+|.++             ..+|+.|+|.|.+...
T Consensus       143 C~~C~G~G~~~--~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~-------------~~~C~~C~G~g~v~~~  207 (369)
T PRK14288        143 CESCDGTGAKD--KALETCKQCNGQGQVFMRQGFMSFAQTCGACQGKGKII-------------KTPCQACKGKTYILKD  207 (369)
T ss_pred             CCCCCCcccCC--CCCcCCCCCCCCcEEEEEeceEEEEEecCCCCCCceEc-------------cccCccCCCcceEEEE
Confidence            35677877653  2457899999999653   1   235899999999865             5779999999876542


Q ss_pred             CCC-----CC------------------------------------------------------CCCCceEEEe--ceEE
Q 016833          169 KDR-----CP------------------------------------------------------QCKGEKVIQE--KKVL  187 (382)
Q Consensus       169 k~~-----C~------------------------------------------------------~C~G~g~~~~--~~~l  187 (382)
                      +..     -.                                                      .|.+.-.+..  .+.+
T Consensus       208 ~~l~V~IP~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~i~v~tLdG~~l  287 (369)
T PRK14288        208 EEIDAIIPEGIDDQNRMVLKNKGNEYEKGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKGDEL  287 (369)
T ss_pred             EEEEEecCCCCCCCCEEEEccCccCCCCCCCCCEEEEEEEEECCCcEEeCCEEEEEEecCHHHHhcCCEEEeecCCCCEE
Confidence            221     00                                                      0111111111  1468


Q ss_pred             EEEeccCCCCCCEEEeCCCCCCCCCC-CCccEEEEEEEecCCccccccccc
Q 016833          188 EVIVEKGMQNGQKITFPGEADEAPDT-VTGDIVFVLQQKEHPKFKRKGDDL  237 (382)
Q Consensus       188 ~V~Ip~G~~~g~~i~~~geG~~~~g~-~~GDl~v~i~~k~h~~F~R~g~DL  237 (382)
                      +|.||+|+++|++++|+|+|.+.++. ..|||||+|+++.|..|+.+...|
T Consensus       288 ~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~v~~P~~ls~~q~~~  338 (369)
T PRK14288        288 ELKIPRNARDRQTFAFRNEGVKHPESSYRGSLIVELQVIYPKSLNKEQQEL  338 (369)
T ss_pred             EEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHH
Confidence            99999999999999999999986654 469999999999998766555433

>TIGR02349 DnaJ_bact chaperone protein DnaJ

Probab=99.26  E-value=1.1e-11  Score=123.32  Aligned_cols=129  Identities=21%  Similarity=0.446  Sum_probs=92.0

Q ss_pred             cccCcceeEEeeceeeeCCCCCCCCccCC----------CcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEE
Q 016833           96 DLYNGTSKKLSLSRNVICTKCKGKGSKSG----------ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGET  165 (382)
Q Consensus        96 e~~~G~~~~i~~~r~~~C~~C~G~G~~~~----------~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~  165 (382)
                      ..|.|.... .-.....|+.|+|+|....          ...+|+.|.|+|.++             +.+|+.|.|+|.+
T Consensus       147 ~~C~G~G~~-~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~-------------~~~C~~C~G~g~v  212 (354)
T TIGR02349       147 ETCHGTGAK-PGTDPKTCPTCGGTGQVRRQQGTPFGFFQQQQTCPTCGGEGKII-------------KEPCSTCKGKGRV  212 (354)
T ss_pred             CCCCCCCCC-CCCCCccCCCCCCeeEEEEEEeccCCceEEEEecCCCCCcceec-------------CCCCCCCCCCcEe
Confidence            556776654 2233578999999996431          135899999999875             5679999999987


Q ss_pred             ecCCCC----------------------CC--------------------------------------CCCCceEEE-ec
Q 016833          166 INDKDR----------------------CP--------------------------------------QCKGEKVIQ-EK  184 (382)
Q Consensus       166 ~~~k~~----------------------C~--------------------------------------~C~G~g~~~-~~  184 (382)
                      ...+..                      ..                                      .|.+...+. -.
T Consensus       213 ~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~f~r~g~DL~~~~~isl~eAl~G~~~~i~~ld  292 (354)
T TIGR02349       213 KERKTITVKIPAGVDTGQRLRVSGKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTLD  292 (354)
T ss_pred             cccceEEEEECCCCCCCCEEEEecCccCCCCCCCCCCEEEEEEEecCcceEEecCCEEEEEEeCHHHHhCCCeEEEecCC
Confidence            553332                      00                                      011111111 11


Q ss_pred             eEEEEEeccCCCCCCEEEeCCCCCCCCC-CCCccEEEEEEEecCCccccccccce
Q 016833          185 KVLEVIVEKGMQNGQKITFPGEADEAPD-TVTGDIVFVLQQKEHPKFKRKGDDLF  238 (382)
Q Consensus       185 ~~l~V~Ip~G~~~g~~i~~~geG~~~~g-~~~GDl~v~i~~k~h~~F~R~g~DL~  238 (382)
                      ..++|.||+|+++|++++|+|+|++.++ ..+|||||+|++..++.|+++...++
T Consensus       293 G~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~i~~~v~~P~~l~~~~~~~l  347 (354)
T TIGR02349       293 GDVKLKIPAGTQSGTVFRLKGKGVPRLRGNGRGDLLVTVKVETPKNLSKEQKELL  347 (354)
T ss_pred             ceEEEEECCcccCCcEEEECCCCcCCCCCCCCCCEEEEEEEECCCCCCHHHHHHH
Confidence            3589999999999999999999998653 46899999999999988887776554

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.

>PRK14295 chaperone protein DnaJ; Provisional

Probab=99.26  E-value=1.2e-11  Score=124.32  Aligned_cols=126  Identities=23%  Similarity=0.448  Sum_probs=90.0

Q ss_pred             ccccCcceeEEeeceeeeCCCCCCCCccCC------CcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecC
Q 016833           95 EDLYNGTSKKLSLSRNVICTKCKGKGSKSG------ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETIND  168 (382)
Q Consensus        95 ee~~~G~~~~i~~~r~~~C~~C~G~G~~~~------~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~  168 (382)
                      -..|.|...+ .-.....|+.|+|+|....      ...+|+.|+|+|.++             ..+|..|.|+|.+...
T Consensus       169 C~~C~G~G~~-~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~-------------~~~C~~C~G~g~~~~~  234 (389)
T PRK14295        169 CPACSGTGAK-NGTTPRVCPTCSGTGQVSRNSGGFSLSEPCPDCKGRGLIA-------------DDPCLVCKGSGRAKSS  234 (389)
T ss_pred             CCCCcccccC-CCCCCcCCCCCCCEeEEEEEecceEEEEecCCCcceeEEe-------------ccCCCCCCCCceEeee
Confidence            3667787765 2234578999999996431      236899999999875             5789999999987543


Q ss_pred             CCC----------------------CC--------------------------------------CCCCceEEEe--ceE
Q 016833          169 KDR----------------------CP--------------------------------------QCKGEKVIQE--KKV  186 (382)
Q Consensus       169 k~~----------------------C~--------------------------------------~C~G~g~~~~--~~~  186 (382)
                      +..                      ..                                      .+.+.-.+..  .+.
T Consensus       235 ~~l~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~tldG~~  314 (389)
T PRK14295        235 RTMQVRIPAGVSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGAEVRVPTLGGPP  314 (389)
T ss_pred             eEEEEEeCCCCCCCCEEEEcccccCCCCCCCCccEEEEEEEecCCCEEEecCCEEEEEeecHHHHhCCCeEEEECCCCCE
Confidence            322                      00                                      0111111111  147


Q ss_pred             EEEEeccCCCCCCEEEeCCCCCCCCCCCCccEEEEEEEecCCcccccc
Q 016833          187 LEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKG  234 (382)
Q Consensus       187 l~V~Ip~G~~~g~~i~~~geG~~~~g~~~GDl~v~i~~k~h~~F~R~g  234 (382)
                      ++|+||+|+++|++|+|+|+|++..+...|||||+|++.-+..+.-..
T Consensus       315 ~~v~ip~g~~~g~~iri~G~G~p~~~~~~GDL~i~~~v~~P~~Ls~~q  362 (389)
T PRK14295        315 VTVKLPPGTPNGRVLRVRGKGAVRKDGTRGDLLVTVEVAVPKDLSGKA  362 (389)
T ss_pred             EEEEECCccCCCcEEEECCCCcCCCCCCCCCEEEEEEEECCCCCCHHH
Confidence            999999999999999999999986566789999999999876544443

>PRK14293 chaperone protein DnaJ; Provisional

Probab=99.24  E-value=1.1e-11  Score=124.10  Aligned_cols=132  Identities=19%  Similarity=0.406  Sum_probs=94.7

Q ss_pred             cccCcceeEEeeceeeeCCCCCCCCccC-------C---CcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEE
Q 016833           96 DLYNGTSKKLSLSRNVICTKCKGKGSKS-------G---ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGET  165 (382)
Q Consensus        96 e~~~G~~~~i~~~r~~~C~~C~G~G~~~-------~---~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~  165 (382)
                      ..|.|...+.. .....|+.|+|+|...       +   ...+|+.|.|+|.++             ..+|..|.|+|.+
T Consensus       147 ~~C~G~G~~~~-~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~-------------~~~C~~C~G~g~v  212 (374)
T PRK14293        147 ETCRGSGAKPG-TGPTTCSTCGGAGQVRRATRTPFGSFTQVSECPTCNGTGQVI-------------EDPCDACGGQGVK  212 (374)
T ss_pred             CCCCCcCCCCC-CCCeeCCCCCCcceEEEEEecCcceEEEEeeCCCCCcceeEe-------------ccCCCCCCCCccc
Confidence            56677665532 2346899999999643       1   125899999999875             5689999999976


Q ss_pred             ecCCCC----------------------CC--------------------------------------CCCCceEEEe-c
Q 016833          166 INDKDR----------------------CP--------------------------------------QCKGEKVIQE-K  184 (382)
Q Consensus       166 ~~~k~~----------------------C~--------------------------------------~C~G~g~~~~-~  184 (382)
                      ...+..                      -.                                      .|.+.-.+.. .
T Consensus       213 ~~~~~~~V~IppG~~~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ld  292 (374)
T PRK14293        213 QVTKKLKINIPAGVDTGTRLRVSGEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVD  292 (374)
T ss_pred             ccceEEEEEeCCCCCCCCEEEEccCccCCCCCCCCcCEEEEEEEeCCCccChhhhceEEEeccCHHHHhCCCEEEecCCC
Confidence            543221                      00                                      1111111111 1


Q ss_pred             eEEEEEeccCCCCCCEEEeCCCCCCCCCC--CCccEEEEEEEecCCccccccccceeee
Q 016833          185 KVLEVIVEKGMQNGQKITFPGEADEAPDT--VTGDIVFVLQQKEHPKFKRKGDDLFVEH  241 (382)
Q Consensus       185 ~~l~V~Ip~G~~~g~~i~~~geG~~~~g~--~~GDl~v~i~~k~h~~F~R~g~DL~~~~  241 (382)
                      ..++|+||+|+++|++++|+|+|.+.++.  ..|||||.|++..|+.|++++.+|+-++
T Consensus       293 G~~~i~ip~~~~~g~~~ri~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~l~~~l  351 (374)
T PRK14293        293 GPVELTIPAGTQPNTVLTLENKGVPRLGNPVARGDHLITVKVKIPTRISDEERELLEKL  351 (374)
T ss_pred             CCEEEEeCCCCCCCCEEEECCCCCCCCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence            34789999999999999999999985543  5799999999999999999888777654

>PRK14286 chaperone protein DnaJ; Provisional

Probab=99.23  E-value=2.1e-11  Score=122.08  Aligned_cols=128  Identities=22%  Similarity=0.435  Sum_probs=89.7

Q ss_pred             cccCcceeEEeeceeeeCCCCCCCCccCC------CcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCC
Q 016833           96 DLYNGTSKKLSLSRNVICTKCKGKGSKSG------ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDK  169 (382)
Q Consensus        96 e~~~G~~~~i~~~r~~~C~~C~G~G~~~~------~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k  169 (382)
                      +.|.|...+ .-.....|+.|+|+|....      ...+|+.|+|+|.++             ..+|+.|+|+|.+...+
T Consensus       154 ~~C~G~G~~-~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~-------------~~~C~~C~G~g~~~~~~  219 (372)
T PRK14286        154 VDCNGSGAS-KGSSPTTCPDCGGSGQIRRTQGFFSVATTCPTCRGKGTVI-------------SNPCKTCGGQGLQEKRR  219 (372)
T ss_pred             CCCcCCCcC-CCCCCccCCCCcCeEEEEEEeceEEEEEeCCCCCceeeEe-------------cccCCCCCCCcEEecce
Confidence            567777665 2233478999999996531      236899999999875             57899999999876532


Q ss_pred             CC----------------------CCC--CCCc------------------------------------eEEEe--ceEE
Q 016833          170 DR----------------------CPQ--CKGE------------------------------------KVIQE--KKVL  187 (382)
Q Consensus       170 ~~----------------------C~~--C~G~------------------------------------g~~~~--~~~l  187 (382)
                      ..                      ...  -.|.                                    -.+..  .+.+
T Consensus       220 ~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~i  299 (372)
T PRK14286        220 TINIKIPPGVETGSRLKVSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPTIDGKKA  299 (372)
T ss_pred             EEEEEECCCCCCCCEEEECCccccCCCCCCCceEEEEEEEccCCCEEEecCCEEEEEEECHHHHhCCCEEEEeCCCCCEE
Confidence            22                      111  0111                                    11111  1468


Q ss_pred             EEEeccCCCCCCEEEeCCCCCCCCC-CCCccEEEEEEEecCCccccccccc
Q 016833          188 EVIVEKGMQNGQKITFPGEADEAPD-TVTGDIVFVLQQKEHPKFKRKGDDL  237 (382)
Q Consensus       188 ~V~Ip~G~~~g~~i~~~geG~~~~g-~~~GDl~v~i~~k~h~~F~R~g~DL  237 (382)
                      +|.||+|+++|++++|+|+|.+..+ ...|||||+|++..+..++.+...|
T Consensus       300 ~v~ip~g~~~g~~~ri~G~G~P~~~~~~~GDL~V~~~V~~P~~Ls~~qk~~  350 (372)
T PRK14286        300 KMKIPEGTESGQVFRLKGHGMPYLGAYGKGDQHVIVKIEIPKKITRRQREL  350 (372)
T ss_pred             EEEeCCccCCCcEEEECCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHH
Confidence            9999999999999999999998543 4579999999999887655544433

>PRK14292 chaperone protein DnaJ; Provisional

Probab=99.23  E-value=1.7e-11  Score=122.70  Aligned_cols=132  Identities=19%  Similarity=0.406  Sum_probs=93.5

Q ss_pred             ccccCcceeEEeeceeeeCCCCCCCCccC-------C---CcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeE
Q 016833           95 EDLYNGTSKKLSLSRNVICTKCKGKGSKS-------G---ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGE  164 (382)
Q Consensus        95 ee~~~G~~~~i~~~r~~~C~~C~G~G~~~-------~---~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~  164 (382)
                      -+.|+|+...........|+.|+|+|...       +   ...+|+.|+|+|..+             ..+|+.|.|+|.
T Consensus       142 C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~-------------~~~C~~C~G~g~  208 (371)
T PRK14292        142 CEHCHGSRTEPGGKPPKTCPTCRGAGAVRAQARTIFGVVETQQPCPTCRGEGQII-------------TDPCTVCRGRGR  208 (371)
T ss_pred             CCCCcccccCCCCCCCccCCCCCCccEEEEEEeccCceEEEeeecCCCcccceec-------------CCCCCCCCCceE
Confidence            46778887664444468899999999654       1   125899999999865             678999999998


Q ss_pred             EecCCCC-----CC-----------------------------------------------------CCCCceEEE-ece
Q 016833          165 TINDKDR-----CP-----------------------------------------------------QCKGEKVIQ-EKK  185 (382)
Q Consensus       165 ~~~~k~~-----C~-----------------------------------------------------~C~G~g~~~-~~~  185 (382)
                      +...+..     -.                                                     .+.+.-.+. -..
T Consensus       209 v~~~~~~~V~Ip~G~~~G~~i~~~G~G~~~~~~~GDL~v~i~v~~h~~f~r~g~dL~~~~~isl~eAl~G~~~~i~tldG  288 (371)
T PRK14292        209 TLKAETVKVKLPRGIDEGYRIRVAGMGNEGPGGNGDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLDG  288 (371)
T ss_pred             EeecceEEEEECCCCCCCcEEEEecCcCCCCCCCCCEEEEEEEecCCccccchhceeEEeccCHHHHhCCCeEEEECCCC
Confidence            7543322     00                                                     011111111 113


Q ss_pred             EEEEEeccCCCCCCEEEeCCCCCCCC-CCCCccEEEEEEEecCCcccccccccee
Q 016833          186 VLEVIVEKGMQNGQKITFPGEADEAP-DTVTGDIVFVLQQKEHPKFKRKGDDLFV  239 (382)
Q Consensus       186 ~l~V~Ip~G~~~g~~i~~~geG~~~~-g~~~GDl~v~i~~k~h~~F~R~g~DL~~  239 (382)
                      ..+|.||+|+++|++++|+|+|++.+ +..+|||||+|+++.|+.|+.+...|+-
T Consensus       289 ~~~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll~  343 (371)
T PRK14292        289 PQVIEVKPGTQHGDLHRLRGQGMPRLQGAGTGDLIVEYEIAVPKQLSPEAREALE  343 (371)
T ss_pred             CEEEecCCCcCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHH
Confidence            35799999999999999999999854 4568999999999999877766554443

>PRK14287 chaperone protein DnaJ; Provisional

Probab=99.23  E-value=9.3e-12  Score=124.52  Aligned_cols=131  Identities=20%  Similarity=0.409  Sum_probs=92.6

Q ss_pred             cccCcceeEEeeceeeeCCCCCCCCccC-------C---CcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEE
Q 016833           96 DLYNGTSKKLSLSRNVICTKCKGKGSKS-------G---ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGET  165 (382)
Q Consensus        96 e~~~G~~~~i~~~r~~~C~~C~G~G~~~-------~---~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~  165 (382)
                      ..|.|+..+ .-.+...|+.|+|+|...       +   ...+|+.|+|+|.++             ..+|..|.|+|.+
T Consensus       142 ~~C~G~G~~-~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~-------------~~~C~~C~G~g~v  207 (371)
T PRK14287        142 GTCHGSGAK-PGTKPETCSHCGGSGQLNVEQNTPFGRVVNRRVCHHCEGTGKII-------------KQKCATCGGKGKV  207 (371)
T ss_pred             CCCCCcccC-CCCCCcccCCCCCEEEEEEEEecCCceEEEEEeCCCCCCCCccc-------------cccCCCCCCeeEE
Confidence            567777655 334457899999999653       1   135899999999865             5779999999876


Q ss_pred             ecCCCC---------------------C---------------------------------------CCCCCceEEEe-c
Q 016833          166 INDKDR---------------------C---------------------------------------PQCKGEKVIQE-K  184 (382)
Q Consensus       166 ~~~k~~---------------------C---------------------------------------~~C~G~g~~~~-~  184 (382)
                      ...+..                     -                                       ..|.+.-.+.. .
T Consensus       208 ~~~~~l~V~Ip~G~~~G~~i~~~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ld  287 (371)
T PRK14287        208 RKRKKINVKVPAGIDHGQQLRVSGQGEAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTLN  287 (371)
T ss_pred             eeeEEEEEEECCcCCCCCEEEEccCCcCCCCCCCCccEEEEEEEecCCCEEEecCCeEEEEeccHHHHhCCCEEEEEcCC
Confidence            432211                     0                                       00111111111 1


Q ss_pred             eEEEEEeccCCCCCCEEEeCCCCCCCC-CCCCccEEEEEEEecCCccccccccceee
Q 016833          185 KVLEVIVEKGMQNGQKITFPGEADEAP-DTVTGDIVFVLQQKEHPKFKRKGDDLFVE  240 (382)
Q Consensus       185 ~~l~V~Ip~G~~~g~~i~~~geG~~~~-g~~~GDl~v~i~~k~h~~F~R~g~DL~~~  240 (382)
                      ..++|+||+|+++|++++|+|+|.+.+ +...|||||+|++..|+.|+++...|+..
T Consensus       288 g~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll~~  344 (371)
T PRK14287        288 GKVKLKIPAGTQTGTSFRLRGKGVPNVHGRGQGDQHVQVRVVTPKNLTEKEKELMRE  344 (371)
T ss_pred             CCEEEEECCCccCCcEEEEcCCCccCCCCCCCCCEEEEEEEEcCCCCCHHHHHHHHH
Confidence            448999999999999999999999854 34679999999999999888776655544

>PRK14280 chaperone protein DnaJ; Provisional

Probab=99.21  E-value=2.9e-11  Score=121.22  Aligned_cols=125  Identities=22%  Similarity=0.437  Sum_probs=86.9

Q ss_pred             cccCcceeEEeeceeeeCCCCCCCCccC-------C---CcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEE
Q 016833           96 DLYNGTSKKLSLSRNVICTKCKGKGSKS-------G---ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGET  165 (382)
Q Consensus        96 e~~~G~~~~i~~~r~~~C~~C~G~G~~~-------~---~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~  165 (382)
                      +.|.|...+ .-.....|+.|+|+|...       +   ...+|+.|+|+|.++             ..+|+.|+|+|.+
T Consensus       147 ~~C~G~G~~-~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~-------------~~~C~~C~G~g~v  212 (376)
T PRK14280        147 DTCHGSGAK-PGTSKETCSHCGGSGQVSVEQNTPFGRVVNRQTCPHCNGTGQEI-------------KEKCPTCHGKGKV  212 (376)
T ss_pred             CCCCCcccC-CCCCCccCCCCCCEEEEEEEeecCCceEEEEEEcCCCCCCCcee-------------cCCCCCCCCceEE
Confidence            567777654 223457899999999642       1   235899999999865             5779999999987


Q ss_pred             ecCCCC----------------------CC--------------------------------------CCCCceEEE-ec
Q 016833          166 INDKDR----------------------CP--------------------------------------QCKGEKVIQ-EK  184 (382)
Q Consensus       166 ~~~k~~----------------------C~--------------------------------------~C~G~g~~~-~~  184 (382)
                      ...+..                      ..                                      .+.+.-.+. -.
T Consensus       213 ~~~~~i~V~Ip~G~~~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tld  292 (376)
T PRK14280        213 RKRKKINVKIPAGVDNGQQIRVSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVPTLH  292 (376)
T ss_pred             EEEEEEEEEeCCCCcCCcEEEEcccccCCCCCCCCcCEEEEEEEecCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCC
Confidence            543222                      00                                      011111111 11


Q ss_pred             eEEEEEeccCCCCCCEEEeCCCCCCCC-CCCCccEEEEEEEecCCcccccc
Q 016833          185 KVLEVIVEKGMQNGQKITFPGEADEAP-DTVTGDIVFVLQQKEHPKFKRKG  234 (382)
Q Consensus       185 ~~l~V~Ip~G~~~g~~i~~~geG~~~~-g~~~GDl~v~i~~k~h~~F~R~g  234 (382)
                      ..++|.||+|+++|++++|+|+|.+.. +...|||||+|++..+..++.+.
T Consensus       293 g~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~v~~P~~Ls~~q  343 (376)
T PRK14280        293 GKVKLKIPAGTQTGTQFRLKGKGVPNVRGYGQGDQYVVVRVVTPTKLTDRQ  343 (376)
T ss_pred             ceEEEEECCCCCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEECCCCCCHHH
Confidence            458999999999999999999999854 34679999999999876544433

>PRK14281 chaperone protein DnaJ; Provisional

Probab=99.21  E-value=3.3e-11  Score=121.65  Aligned_cols=123  Identities=19%  Similarity=0.338  Sum_probs=87.2

Q ss_pred             cccCcceeEEeeceeeeCCCCCCCCccCC----------CcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEE
Q 016833           96 DLYNGTSKKLSLSRNVICTKCKGKGSKSG----------ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGET  165 (382)
Q Consensus        96 e~~~G~~~~i~~~r~~~C~~C~G~G~~~~----------~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~  165 (382)
                      ..|.|...+-.  ....|+.|+|+|....          ...+|+.|+|+|.++             ..+|+.|+|+|.+
T Consensus       167 ~~C~G~G~~~~--~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~-------------~~~C~~C~G~g~v  231 (397)
T PRK14281        167 KECNGTGSKTG--ATETCPTCHGSGEVRQASKTMFGQFVNITACPTCGGEGRVV-------------KDRCPACYGEGIK  231 (397)
T ss_pred             CCCCCcccCCC--CCccCCCCCCCcEEEEEEecccceEEEEEecCCCcceeeee-------------CCCCCCCCCCccE
Confidence            45677765532  4578999999996521          135899999999875             5789999999987


Q ss_pred             ecCCCC---------------------C---------------------------------------CCCCCceEEEe-c
Q 016833          166 INDKDR---------------------C---------------------------------------PQCKGEKVIQE-K  184 (382)
Q Consensus       166 ~~~k~~---------------------C---------------------------------------~~C~G~g~~~~-~  184 (382)
                      ...+..                     .                                       ..+.+.-.+.. .
T Consensus       232 ~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tld  311 (397)
T PRK14281        232 QGEVTVKVTVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSYPDLVLGTKVEVPTLD  311 (397)
T ss_pred             ecceEEEEecCCCCCCCCEEEEecccccCCCCCCCCcEEEEEEEcCCCCeEEecCCEEEEEEecHHHHhcCCeEEeecCC
Confidence            653222                     0                                       01111111111 1


Q ss_pred             eEEEEEeccCCCCCCEEEeCCCCCCCC-CCCCccEEEEEEEecCCccccc
Q 016833          185 KVLEVIVEKGMQNGQKITFPGEADEAP-DTVTGDIVFVLQQKEHPKFKRK  233 (382)
Q Consensus       185 ~~l~V~Ip~G~~~g~~i~~~geG~~~~-g~~~GDl~v~i~~k~h~~F~R~  233 (382)
                      ..++|.||+|+++|++++|+|+|.+.+ +...|||||+|++.-+..++.+
T Consensus       312 g~i~v~ip~g~~~G~~~ri~g~G~P~~~~~~~GDL~V~~~V~~P~~Ls~~  361 (397)
T PRK14281        312 GAVKLTIPAGTQPETMLRIPGKGIGHLRGSGRGDQYVRVNVFVPKEVSHQ  361 (397)
T ss_pred             ccEEEEeCCccCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEEcCCCCCHH
Confidence            458999999999999999999999854 3467999999999977654433

>PRK14276 chaperone protein DnaJ; Provisional

Probab=99.19  E-value=3.7e-11  Score=120.58  Aligned_cols=126  Identities=23%  Similarity=0.461  Sum_probs=86.7

Q ss_pred             cccCcceeEEeeceeeeCCCCCCCCccC-------C---CcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEE
Q 016833           96 DLYNGTSKKLSLSRNVICTKCKGKGSKS-------G---ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGET  165 (382)
Q Consensus        96 e~~~G~~~~i~~~r~~~C~~C~G~G~~~-------~---~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~  165 (382)
                      +.|.|...+-. .....|+.|+|+|...       +   ...+|+.|+|+|.++             ..+|+.|+|+|.+
T Consensus       150 ~~C~G~G~~~~-~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~-------------~~~C~~C~G~g~~  215 (380)
T PRK14276        150 HTCNGSGAKPG-TSPVTCGKCHGSGVITVDTQTPLGMMRRQVTCDVCHGTGKEI-------------KEPCQTCHGTGHE  215 (380)
T ss_pred             CCCcCcccCCC-CCCccCCCCCCeeEEEEEEecCCceEEEEEECCCCCCCCccc-------------cCCCCCCCCceEE
Confidence            56777765522 3356899999999652       1   135899999999865             5779999999976


Q ss_pred             ecCCCC----------------------CC--------------------------------------CCCCceEEEe-c
Q 016833          166 INDKDR----------------------CP--------------------------------------QCKGEKVIQE-K  184 (382)
Q Consensus       166 ~~~k~~----------------------C~--------------------------------------~C~G~g~~~~-~  184 (382)
                      ...+..                      ..                                      .+.+.-.+.. .
T Consensus       216 ~~~~~l~V~Ip~G~~~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tld  295 (380)
T PRK14276        216 KQAHTVSVKIPAGVETGQQIRLQGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVPTVH  295 (380)
T ss_pred             EEEEEEEEEeCCCccCCcEEEEeccccCCCCCCCCcCEEEEEEEEECcceeeecceEEEEEecCHHHHhCCCeEEEEcCC
Confidence            432221                      00                                      0001111111 1


Q ss_pred             eEEEEEeccCCCCCCEEEeCCCCCCCC-CCCCccEEEEEEEecCCccccccc
Q 016833          185 KVLEVIVEKGMQNGQKITFPGEADEAP-DTVTGDIVFVLQQKEHPKFKRKGD  235 (382)
Q Consensus       185 ~~l~V~Ip~G~~~g~~i~~~geG~~~~-g~~~GDl~v~i~~k~h~~F~R~g~  235 (382)
                      ..++|.||+|+++|++++|+|+|++.+ +..+|||||+|++..+..+..+..
T Consensus       296 g~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~  347 (380)
T PRK14276        296 GDVELKIPAGTQTGKKFRLRGKGAPKLRGGGNGDQHVTVNIVTPTKLNDAQK  347 (380)
T ss_pred             CcEEEEECCCCCCCCEEEECCCCcCCCCCCCCCCEEEEEEEECCCCCCHHHH
Confidence            447999999999999999999999865 346799999999998875544443

>PRK14297 chaperone protein DnaJ; Provisional

Probab=99.16  E-value=8e-11  Score=118.23  Aligned_cols=125  Identities=25%  Similarity=0.447  Sum_probs=85.6

Q ss_pred             cccCcceeEEeeceeeeCCCCCCCCccC-------C---CcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEE
Q 016833           96 DLYNGTSKKLSLSRNVICTKCKGKGSKS-------G---ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGET  165 (382)
Q Consensus        96 e~~~G~~~~i~~~r~~~C~~C~G~G~~~-------~---~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~  165 (382)
                      ..|.|...+ .-.....|+.|+|+|...       +   ...+|+.|+|+|.++             ..+|..|+|+|.+
T Consensus       152 ~~C~G~G~~-~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~-------------~~~C~~C~G~g~v  217 (380)
T PRK14297        152 ETCNGTGAK-PGTSPKTCDKCGGTGQIRVQRNTPLGSFVSTTTCDKCGGSGKVI-------------EDPCNKCHGKGKV  217 (380)
T ss_pred             CCccccccc-CCCcCccCCCccCeEEEEEEEEcCCceeEEEEeCCCCCCCceEc-------------CCCCCCCCCCeEE
Confidence            456776655 223357899999999652       1   236899999999865             5789999999965


Q ss_pred             ecCCCC-----CC-------------------------------------------------------CCCCceEEE-ec
Q 016833          166 INDKDR-----CP-------------------------------------------------------QCKGEKVIQ-EK  184 (382)
Q Consensus       166 ~~~k~~-----C~-------------------------------------------------------~C~G~g~~~-~~  184 (382)
                      ...+..     -.                                                       .+.+.-.+. -.
T Consensus       218 ~~~~~i~V~Ip~G~~~G~~I~l~g~G~~~~~~~~~GDL~v~v~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~~ld  297 (380)
T PRK14297        218 RKNRKIKVNVPAGVDTGNVIPLRGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIKVPTVD  297 (380)
T ss_pred             EeEeEEEEEeCCCCCCCcEEEEecCccCCCCCCCCccEEEEEEEcCCCCEEEeCCCEEEEEEeCHHHHhCCCcEEEEcCC
Confidence            432211     00                                                       011111111 11


Q ss_pred             eEEEEEeccCCCCCCEEEeCCCCCCCC-CCCCccEEEEEEEecCCcccccc
Q 016833          185 KVLEVIVEKGMQNGQKITFPGEADEAP-DTVTGDIVFVLQQKEHPKFKRKG  234 (382)
Q Consensus       185 ~~l~V~Ip~G~~~g~~i~~~geG~~~~-g~~~GDl~v~i~~k~h~~F~R~g  234 (382)
                      ..++|.||+|+++|++++|+|+|.+.. +...|||||+|++.-+..+..+.
T Consensus       298 g~~~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~ls~~q  348 (380)
T PRK14297        298 GEVKYEVPAGTQPGTVFRLKGKGVPRVNSTGRGNQYVTVIVDIPKKLNSKQ  348 (380)
T ss_pred             CcEEEEECCCcCCCCEEEEcCCCcCCCCCCCCCcEEEEEEEEcCCCCCHHH
Confidence            458999999999999999999999754 34679999999999876544433

>PRK14289 chaperone protein DnaJ; Provisional

Probab=99.14  E-value=6.1e-11  Score=119.36  Aligned_cols=122  Identities=21%  Similarity=0.417  Sum_probs=85.2

Q ss_pred             cccCcceeEEeeceeeeCCCCCCCCccC-------CC---cccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEE
Q 016833           96 DLYNGTSKKLSLSRNVICTKCKGKGSKS-------GA---SMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGET  165 (382)
Q Consensus        96 e~~~G~~~~i~~~r~~~C~~C~G~G~~~-------~~---~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~  165 (382)
                      ..|.|.... .-.....|+.|+|+|...       +.   ..+|+.|+|+|.++             ...|+.|+|+|.+
T Consensus       158 ~~C~G~G~~-~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~-------------~~~C~~C~G~g~v  223 (386)
T PRK14289        158 SHCHGTGAE-GNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNGEGKII-------------KKKCKKCGGEGIV  223 (386)
T ss_pred             CCCCCCCCC-CCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCcccccc-------------CcCCCCCCCCcEE
Confidence            456666544 224457899999999763       11   25799999999865             5779999999976


Q ss_pred             ecCCCC----------------------C--------------------------------------CCCCCceEEEe-c
Q 016833          166 INDKDR----------------------C--------------------------------------PQCKGEKVIQE-K  184 (382)
Q Consensus       166 ~~~k~~----------------------C--------------------------------------~~C~G~g~~~~-~  184 (382)
                      ...+..                      .                                      ..+.+...+.. .
T Consensus       224 ~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ld  303 (386)
T PRK14289        224 YGEEVITVKIPAGVAEGMQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALGGAVEVPTID  303 (386)
T ss_pred             eeeEEEEEEeCCCCCCCCEEEEeccccCCCCCCCCccEEEEEEEecCCcccccccceeEEeccCHHHHhCCCeEEeecCC
Confidence            543222                      0                                      01111111111 2


Q ss_pred             eEEEEEeccCCCCCCEEEeCCCCCCCC-CCCCccEEEEEEEecCCccc
Q 016833          185 KVLEVIVEKGMQNGQKITFPGEADEAP-DTVTGDIVFVLQQKEHPKFK  231 (382)
Q Consensus       185 ~~l~V~Ip~G~~~g~~i~~~geG~~~~-g~~~GDl~v~i~~k~h~~F~  231 (382)
                      ..++|.||+|+++|++++|+|+|.+.+ +..+|||||.|+++-+..++
T Consensus       304 g~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~l~  351 (386)
T PRK14289        304 GKAKVKIEAGTQPGKVLRLRNKGLPSVNGYGTGDLLVNVSVYIPETLS  351 (386)
T ss_pred             ceEEEEECCccCCCcEEEECCCCcCCCCCCCCCcEEEEEEEEeCCCCC
Confidence            458999999999999999999999854 35689999999998775433

>PRK14283 chaperone protein DnaJ; Provisional

Probab=99.13  E-value=1.4e-10  Score=116.41  Aligned_cols=125  Identities=22%  Similarity=0.402  Sum_probs=86.7

Q ss_pred             cccCcceeEEeeceeeeCCCCCCCCccC-------C---CcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEE
Q 016833           96 DLYNGTSKKLSLSRNVICTKCKGKGSKS-------G---ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGET  165 (382)
Q Consensus        96 e~~~G~~~~i~~~r~~~C~~C~G~G~~~-------~---~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~  165 (382)
                      ..|+|....- -.....|+.|+|+|...       +   ...+|+.|+|+|..+             ..+|..|+|+|.+
T Consensus       150 ~~C~G~G~~~-~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~-------------~~~C~~C~G~g~v  215 (378)
T PRK14283        150 PVCNGSRAEP-GSEVKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDCQGEGKIV-------------EKPCSNCHGKGVV  215 (378)
T ss_pred             CCCCccccCC-CCCCccCCCcCCccEEEEEEeccCceEEEEEECCCCCccceec-------------CCCCCCCCCceee
Confidence            5677776542 23456899999999753       1   135899999999865             5779999999986


Q ss_pred             ecCCCC----------------------CC--------------------------------------CCCCceEEE-ec
Q 016833          166 INDKDR----------------------CP--------------------------------------QCKGEKVIQ-EK  184 (382)
Q Consensus       166 ~~~k~~----------------------C~--------------------------------------~C~G~g~~~-~~  184 (382)
                      ...+..                      ..                                      .+.+...+. -.
T Consensus       216 ~~~~~l~V~IppG~~~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~r~G~DL~~~~~Isl~eAl~G~~~~i~tld  295 (378)
T PRK14283        216 RETKTISVKIPAGVETGSRLRVSGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQAALGDTVDVPTID  295 (378)
T ss_pred             ccceeEEEEECCCCCCCcEEEEeccccCCCCCCCCccEEEEEEEEcCCCEEEecCCEEEEEecCHHHHhcCCeEEEEcCC
Confidence            543222                      00                                      011111121 12


Q ss_pred             eEEEEEeccCCCCCCEEEeCCCCCCCC-CCCCccEEEEEEEecCCcccccc
Q 016833          185 KVLEVIVEKGMQNGQKITFPGEADEAP-DTVTGDIVFVLQQKEHPKFKRKG  234 (382)
Q Consensus       185 ~~l~V~Ip~G~~~g~~i~~~geG~~~~-g~~~GDl~v~i~~k~h~~F~R~g  234 (382)
                      ..++|.||+|+++|++++|+|+|.+.+ +...|||||+|++.-+...+.+.
T Consensus       296 G~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GdL~v~~~v~~P~~l~~~q  346 (378)
T PRK14283        296 GPVELKIPAGTQSGTTFRLKGHGMPSLRWSGKGNLYVKVKVVVPKKLSPKQ  346 (378)
T ss_pred             ceEEEEeCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEeCCCCCHHH
Confidence            368999999999999999999999754 34679999999998776544443

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=99.12  E-value=1.9e-10  Score=116.62  Aligned_cols=119  Identities=19%  Similarity=0.299  Sum_probs=83.8

Q ss_pred             cccCcceeEEeeceeeeCCCCCCCCccC-----C-----CcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEE
Q 016833           96 DLYNGTSKKLSLSRNVICTKCKGKGSKS-----G-----ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGET  165 (382)
Q Consensus        96 e~~~G~~~~i~~~r~~~C~~C~G~G~~~-----~-----~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~  165 (382)
                      ..|+|+..+-  .....|+.|+|+|...     +     ...+|+.|+|+|.++.           ...+|+.|+|+|.+
T Consensus       154 ~~C~G~G~~~--~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~i~-----------~~~~C~~C~G~g~v  220 (421)
T PTZ00037        154 ANCEGHGGPK--DAFVDCKLCNGQGIRVQIRQMGSMIHQTQSTCNSCNGQGKIIP-----------ESKKCKNCSGKGVK  220 (421)
T ss_pred             cccCCCCCCC--CCCccCCCCCCCCeEEEEEeecceeeEEEEeCCCCCCcceecc-----------ccccCCcCCCccee
Confidence            5677877542  3457899999999632     1     2358999999998762           24789999999987


Q ss_pred             ecCCCC-----CC------------------------------------------------------CCCCceEEEe--c
Q 016833          166 INDKDR-----CP------------------------------------------------------QCKGEKVIQE--K  184 (382)
Q Consensus       166 ~~~k~~-----C~------------------------------------------------------~C~G~g~~~~--~  184 (382)
                      ...+..     -.                                                      .|.+.-.+..  .
T Consensus       221 ~~~~~l~V~Ip~G~~dG~~I~~~G~Gd~~~~~~pGDLiv~I~~~ph~~F~R~G~DL~~~~~Isl~eAllG~~i~I~tLdG  300 (421)
T PTZ00037        221 KTRKILEVNIDKGVPNQHKITFHGEADEKPNEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDG  300 (421)
T ss_pred             eeeeEEEEeeCCCCCCCcEEEEecccCCCCCCCCCcEEEEEEecCCCCcEEeCCeEEEEEeCCHHHHhcCCEEEeeCCCC
Confidence            543222     00                                                      1111111110  1


Q ss_pred             eEEEEEeccC--CCCCCEEEeCCCCCCCCC--CCCccEEEEEEEecC
Q 016833          185 KVLEVIVEKG--MQNGQKITFPGEADEAPD--TVTGDIVFVLQQKEH  227 (382)
Q Consensus       185 ~~l~V~Ip~G--~~~g~~i~~~geG~~~~g--~~~GDl~v~i~~k~h  227 (382)
                      +.|+|+||+|  +++|++++|+|+|.+..+  ...|||||+|+|.-+
T Consensus       301 ~~l~I~ip~g~vt~pg~~~~I~geGmP~~~~~~~rGDL~V~~~V~~P  347 (421)
T PTZ00037        301 RKLLVNTPPGEVVKPGDIKVINNEGMPTYKSPFKKGNLYVTFEVIFP  347 (421)
T ss_pred             CeEEEEeCCCcccCCCcEEEeCCCCcccCCCCCCCCCEEEEEEEEcC
Confidence            5689999999  999999999999998543  357999999999877

>PRK14296 chaperone protein DnaJ; Provisional

Probab=99.12  E-value=1e-10  Score=117.09  Aligned_cols=126  Identities=21%  Similarity=0.382  Sum_probs=87.0

Q ss_pred             ccccCcceeEEeeceeeeCCCCCCCCccCC----------CcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeE
Q 016833           95 EDLYNGTSKKLSLSRNVICTKCKGKGSKSG----------ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGE  164 (382)
Q Consensus        95 ee~~~G~~~~i~~~r~~~C~~C~G~G~~~~----------~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~  164 (382)
                      -..|.|+..+-. .....|+.|+|+|....          ...+|+.|+|+|.++             ..+|+.|+|+|.
T Consensus       152 C~~C~G~G~~~~-~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~~-------------~~~C~~C~G~g~  217 (372)
T PRK14296        152 CSKCFGSGAESN-SDIHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVCNGAGKII-------------KNKCKNCKGKGK  217 (372)
T ss_pred             cCCCCCCccCCC-CCCccCCCCCCCceEEEEEeccceEEEEEecCCCcCCcceee-------------cccccCCCCceE
Confidence            366778776522 34578999999997531          125899999999875             678999999997


Q ss_pred             EecCCCC----------------------CC---------------------------------------CCCCceEEE-
Q 016833          165 TINDKDR----------------------CP---------------------------------------QCKGEKVIQ-  182 (382)
Q Consensus       165 ~~~~k~~----------------------C~---------------------------------------~C~G~g~~~-  182 (382)
                      +...+..                      ..                                       .|.++-.+. 
T Consensus       218 v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~v~v~~h~~F~R~~G~DL~~~~~Isl~eAllG~~~~i~t  297 (372)
T PRK14296        218 YLERKKIEVNIPKGIRPNQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMTYNISYLDAILGNEIIIKT  297 (372)
T ss_pred             EEEEEEEEEEECCCCCCCCEEEEeccccCCCCCCCCccEEEEEEEeCCCCEEEeCCCcEEEEEecCHHHHhCCCEEEeeC
Confidence            6442222                      00                                       011111111 


Q ss_pred             eceEEEEEeccCCCCCCEEEeCCCCCCCC--CCCCccEEEEEEEecCCcccccc
Q 016833          183 EKKVLEVIVEKGMQNGQKITFPGEADEAP--DTVTGDIVFVLQQKEHPKFKRKG  234 (382)
Q Consensus       183 ~~~~l~V~Ip~G~~~g~~i~~~geG~~~~--g~~~GDl~v~i~~k~h~~F~R~g  234 (382)
                      -...++|.||+++++|++++|+|+|.+..  ....|||||+|++.-+..+..+.
T Consensus       298 ldG~~~v~ip~~t~~g~~~ri~GkGmP~~~~~~~~GDL~V~~~V~~P~~Ls~~q  351 (372)
T PRK14296        298 LDGDIKYKLPKSINSNELIIINNKGLYKSINKDKRGDLIIKVNIVVPKNLSKKE  351 (372)
T ss_pred             CCCCEEEEECCccCCCcEEEEcCCCCCcCCCCCCcCCEEEEEEEECCCCCCHHH
Confidence            01348999999999999999999998732  33579999999999876554443

>PRK14291 chaperone protein DnaJ; Provisional

Probab=99.11  E-value=2.4e-10  Score=114.89  Aligned_cols=118  Identities=25%  Similarity=0.460  Sum_probs=82.9

Q ss_pred             cccCcceeEEeeceeeeCCCCCCCCccCC------CcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCC
Q 016833           96 DLYNGTSKKLSLSRNVICTKCKGKGSKSG------ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDK  169 (382)
Q Consensus        96 e~~~G~~~~i~~~r~~~C~~C~G~G~~~~------~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k  169 (382)
                      ..|+|...+ .-.....|+.|+|+|....      ...+|+.|+|+|. +             ..+|+.|+|.|.+...+
T Consensus       160 ~~C~G~G~~-~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~-~-------------~~~C~~C~G~g~v~~~~  224 (382)
T PRK14291        160 EACGGTGYD-PGSGEKVCPTCGGSGEIYQRGGFFRISQTCPTCGGEGV-L-------------REPCSKCNGRGLVIKKE  224 (382)
T ss_pred             CCCccccCC-CCCCCccCCCCCCceEEEEecceEEEEecCCCCCCceE-E-------------ccCCCCCCCCceEEeee
Confidence            456776654 2234578999999996531      2368999999995 2             46799999999765432


Q ss_pred             CC-----CC-------------------------------------------------------CCCCceEEEe--ceEE
Q 016833          170 DR-----CP-------------------------------------------------------QCKGEKVIQE--KKVL  187 (382)
Q Consensus       170 ~~-----C~-------------------------------------------------------~C~G~g~~~~--~~~l  187 (382)
                      ..     -.                                                       .+.+...+..  .+.+
T Consensus       225 ~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~~~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~l  304 (382)
T PRK14291        225 TIKVRIPPGVDNGSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLGTELEVPLLDGKKE  304 (382)
T ss_pred             EEEEEeCCCCCCCCEEEEecCcCCCCCCCCCccEEEEEEEccCCCeeeecCCeEEEEEeeHHHHhCCCEEEEecCCCCEE
Confidence            22     00                                                       0111111111  1568


Q ss_pred             EEEeccCCCCCCEEEeCCCCCCCCC-CCCccEEEEEEEecCC
Q 016833          188 EVIVEKGMQNGQKITFPGEADEAPD-TVTGDIVFVLQQKEHP  228 (382)
Q Consensus       188 ~V~Ip~G~~~g~~i~~~geG~~~~g-~~~GDl~v~i~~k~h~  228 (382)
                      +|.||+|+++|++|+|+|+|++.++ ..+|||||+|++.-+.
T Consensus       305 ~V~Ip~g~~~G~~i~i~G~G~p~~~~~~~GDL~V~~~V~~P~  346 (382)
T PRK14291        305 KVKIPPGTKEGDKIRVPGKGMPRLKGSGYGDLVVRVHIDVPK  346 (382)
T ss_pred             EEEECCccCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEeCC
Confidence            9999999999999999999998653 4679999999998775

>PRK14299 chaperone protein DnaJ; Provisional

Probab=98.88  E-value=6e-09  Score=101.10  Aligned_cols=86  Identities=27%  Similarity=0.322  Sum_probs=71.6

Q ss_pred             cccccccceeeeccCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCC
Q 016833          230 FKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPE  309 (382)
Q Consensus       230 F~R~g~DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~i~g~GmP~~~~~~~~GdL~i~~~V~~P~  309 (382)
                      +.|+|.||++++.|||.||++|+++.| +++|+.+.|+||||  +++|++++++|+|++.       |||||+|.|.-++
T Consensus       125 ~~~~g~dl~~~l~isL~ea~~G~~~~i-~l~g~~~~V~Ip~G--~~~G~~ir~~g~G~~~-------GDL~v~i~v~~h~  194 (291)
T PRK14299        125 RARKGRDLEAELPLTLEEAYRGGEKVV-EVAGERLSVRIPPG--VREGQVIRLAGKGRQG-------GDLYLVVRLLPHP  194 (291)
T ss_pred             CCCCCCCEEEEEEecHHHHhCCCeEEE-eeCCEEEEEecCCC--cCCCcEEEECCCCCCC-------CCEEEEEEEcCCC
Confidence            457899999999999999999999998 78998899999999  8999999999999862       9999999998666


Q ss_pred             CCCH--------HHHHHHHHhCCC
Q 016833          310 SLSP--------DQCKMLETVLPP  325 (382)
Q Consensus       310 ~l~~--------~~~~~l~~~lp~  325 (382)
                      .+..        -.+.+.+.++..
T Consensus       195 ~f~R~G~DL~~~~~Isl~eAl~G~  218 (291)
T PRK14299        195 VFRLEGDDLYATVDVPAPIAVVGG  218 (291)
T ss_pred             CeEEECCEEEEEEecCHHHHhCCC
Confidence            5332        234555555553

>PLN03165 chaperone protein dnaJ-related; Provisional

Probab=98.85  E-value=5.2e-09  Score=86.49  Aligned_cols=60  Identities=28%  Similarity=0.655  Sum_probs=49.9

Q ss_pred             eeeCCCCCCCCccCCCcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCCCceEEEe
Q 016833          110 NVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQE  183 (382)
Q Consensus       110 ~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~G~g~~~~  183 (382)
                      .+.|..|+|+|..     +|+.|+|+|.+...+  ++  .++++.+|+.|+|+|+.     .|+.|+|++++..
T Consensus        41 ~v~C~~C~GsG~~-----~C~~C~G~G~v~~~~--~g--~~q~~~~C~~C~G~Gk~-----~C~~C~G~G~~~~  100 (111)
T PLN03165         41 TQPCFPCSGTGAQ-----VCRFCVGSGNVTVEL--GG--GEKEVSKCINCDGAGSL-----TCTTCQGSGIQPR  100 (111)
T ss_pred             CCCCCCCCCCCCc-----CCCCCcCcCeEEEEe--CC--cEEEEEECCCCCCccee-----eCCCCCCCEEEee
Confidence            5799999999973     899999999987443  43  35778999999999974     4999999998754

>PRK10266 curved DNA-binding protein CbpA; Provisional

Probab=98.68  E-value=5.6e-08  Score=95.01  Aligned_cols=75  Identities=24%  Similarity=0.367  Sum_probs=62.8

Q ss_pred             cccccceeeeccCHHHHhCCCEEEE----EecC--C-------cEEEEEeCCCccccCCcEEEEcCCCCCCCCCCCCCCc
Q 016833          232 RKGDDLFVEHTLSLTEALCGFQFVI----THLD--G-------RQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGK  298 (382)
Q Consensus       232 R~g~DL~~~~~I~l~eAl~G~~~~i----~tld--G-------~~l~i~~p~g~vi~~g~~~~i~g~GmP~~~~~~~~Gd  298 (382)
                      |+|.||++++.|+|.||+.|+...|    ++++  |       +.+.|.||||  +++|++++++|+|+|.. +...+||
T Consensus       115 ~kg~di~~~v~isLee~~~G~~k~i~~~~~~~~g~G~~~~~~~~~~~V~Ip~G--~~~G~~i~~~g~G~~~~-~~~~~GD  191 (306)
T PRK10266        115 ARGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAG--VGNGQRIRLKGQGTPGE-NGGPNGD  191 (306)
T ss_pred             CCCCceEEEEEEEHHHhcCCceEEEEEecccccCCCeEEEeeeEEEEEEECCC--CcCCcEEEEecCCcCCC-CCCCCcc
Confidence            5689999999999999999995544    4454  3       4689999999  89999999999999964 2346899


Q ss_pred             EEEEEEEECCCC
Q 016833          299 LYIHFTVDFPES  310 (382)
Q Consensus       299 L~i~~~V~~P~~  310 (382)
                      |||+|+|. |..
T Consensus       192 l~v~i~v~-ph~  202 (306)
T PRK10266        192 LWLVIHIA-PHP  202 (306)
T ss_pred             EEEEEEEc-CCC
Confidence            99999999 755

>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional

Probab=98.63  E-value=7.3e-09  Score=111.32  Aligned_cols=55  Identities=25%  Similarity=0.533  Sum_probs=43.6

Q ss_pred             CCCCCCcchhhhcCCCCC------------------------------------ce-eccCccccccccccchhhhhCCC
Q 016833            6 PKKSDNTKYYEILGVSKK------------------------------------RF-VLSDPEKREIYDQYGEDALKEGM   48 (382)
Q Consensus         6 ~~~~~~~~~Y~iLgv~~~------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g~   48 (382)
                      ..|+.+++||+||||+++                                    || |||||++|+.||+||..|+... 
T Consensus       567 t~~~~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~Gl~~~-  645 (1136)
T PTZ00341        567 TIEIPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIKGV-  645 (1136)
T ss_pred             cccCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhCCHHHHHHHhhccccccCCC-
Confidence            557788999999999999                                    99 9999999999999999887532 


Q ss_pred             CCCCCCCCchhhhhcccC
Q 016833           49 GGGGGAHDPFDIFQSFFG   66 (382)
Q Consensus        49 ~~~~~~~~~~d~F~~~Fg   66 (382)
                          +..||.-+| .+||
T Consensus       646 ----~~iDP~~Ff-mlFg  658 (1136)
T PTZ00341        646 ----NFIHPSIFY-LLAS  658 (1136)
T ss_pred             ----CccCHHHHH-HHhh
Confidence                234555434 4555

>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress

Probab=98.41  E-value=2.4e-07  Score=72.71  Aligned_cols=48  Identities=21%  Similarity=0.409  Sum_probs=36.2

Q ss_pred             eEEEEEeccCCCCCCEEEeCCCCCCCC-C-CCCccEEEEEEEecCCcccc
Q 016833          185 KVLEVIVEKGMQNGQKITFPGEADEAP-D-TVTGDIVFVLQQKEHPKFKR  232 (382)
Q Consensus       185 ~~l~V~Ip~G~~~g~~i~~~geG~~~~-g-~~~GDl~v~i~~k~h~~F~R  232 (382)
                      +.++|.||+|+++|+.++++|+|.+.. + ...|||||.+++.-+..++.
T Consensus        27 ~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~   76 (81)
T PF01556_consen   27 KTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEVEFPKKLSP   76 (81)
T ss_dssp             -EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEEEEEE--SSTSH
T ss_pred             CEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEEECCCCCCH
Confidence            467899999999999999999999743 3 37999999999987765543

The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....

>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.40  E-value=5e-08  Score=97.21  Aligned_cols=37  Identities=51%  Similarity=0.943  Sum_probs=34.7

Q ss_pred             CCCcchhhhcCCCCC----------------------------------------ce-eccCccccccccccchhhhh
Q 016833            9 SDNTKYYEILGVSKK----------------------------------------RF-VLSDPEKREIYDQYGEDALK   45 (382)
Q Consensus         9 ~~~~~~Y~iLgv~~~----------------------------------------AY-vLsD~~KR~~YD~~G~~g~~   45 (382)
                      ..+.+||.+|+|+|+                                        || |||||.||++||.||+.|++
T Consensus         6 ~~e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~   83 (546)
T KOG0718|consen    6 LDEIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLK   83 (546)
T ss_pred             cchhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhcccc
Confidence            356799999999999                                        99 99999999999999999998

>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]

Probab=98.37  E-value=7.4e-08  Score=93.23  Aligned_cols=38  Identities=55%  Similarity=0.908  Sum_probs=32.4

Q ss_pred             CCCCCCcchhhhcCCCCC----------------------------------------ce-eccCccccccccccchhhh
Q 016833            6 PKKSDNTKYYEILGVSKK----------------------------------------RF-VLSDPEKREIYDQYGEDAL   44 (382)
Q Consensus         6 ~~~~~~~~~Y~iLgv~~~----------------------------------------AY-vLsD~~KR~~YD~~G~~g~   44 (382)
                      .+-+..+|||+||||.+|                                        |- |||||+||+.||. |++-+
T Consensus       388 kkqs~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDn-GeDPL  466 (504)
T KOG0624|consen  388 KKQSGKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDN-GEDPL  466 (504)
T ss_pred             HHHhccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhccC-CCCCC
Confidence            345678899999999999                                        77 9999999999998 66554

>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.35  E-value=1e-06  Score=86.00  Aligned_cols=107  Identities=22%  Similarity=0.486  Sum_probs=81.1

Q ss_pred             eeCCCCCCCCccCC-----------CcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCCCC--------
Q 016833          111 VICTKCKGKGSKSG-----------ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDR--------  171 (382)
Q Consensus       111 ~~C~~C~G~G~~~~-----------~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~--------  171 (382)
                      ..|+.|.|+|.+..           ....|..|+|+|..+           .....|+.|.|++.+-..+..        
T Consensus       144 ~~C~~C~GsGv~~~~~~~gPg~~qs~q~~C~~C~G~G~~~-----------~~kd~C~~C~G~~~v~~kkil~v~V~~g~  212 (337)
T KOG0712|consen  144 PKCTTCRGSGVQTRTRQMGPGMVQSPQLVCDSCNGSGETI-----------SLKDRCKTCSGAKVVREKKILEVHVEPGM  212 (337)
T ss_pred             CCCCCCCCCCceeEEEeccccccccceeEeccCCCccccc-----------cccccCcccccchhhhhhheeeccccCCC
Confidence            37999999998742           125799999999864           237889999999876543222        


Q ss_pred             ---------------------------------------------------CCCCCCceEEE--eceEEEEEeccC--CC
Q 016833          172 ---------------------------------------------------CPQCKGEKVIQ--EKKVLEVIVEKG--MQ  196 (382)
Q Consensus       172 ---------------------------------------------------C~~C~G~g~~~--~~~~l~V~Ip~G--~~  196 (382)
                                                                         =..|.+..+++  .-+.|++.++||  +.
T Consensus       213 ~~~~ki~f~geadea~g~~pgD~vl~i~~k~h~~F~Rrg~dL~~~~~i~l~eal~G~~~~~~~ldGr~l~~~~~pg~vi~  292 (337)
T KOG0712|consen  213 PHGQKITFKGEADEAPGTKPGDVVLLIDQKEHPGFDRRGSDLYRKLTISLVEALCGFQRVWETLDGRLLKLSSKPGEVIS  292 (337)
T ss_pred             cccceeeeeeeeeecCCCcCccEEEEecccccccceecccccceeeecchhhccccceEEEEccCCceEEEecCCCceeC
Confidence                                                               12444444443  347899999999  99


Q ss_pred             CCCEEEeCCCCCCCCCCCCccEEEEEEEecCC
Q 016833          197 NGQKITFPGEADEAPDTVTGDIVFVLQQKEHP  228 (382)
Q Consensus       197 ~g~~i~~~geG~~~~g~~~GDl~v~i~~k~h~  228 (382)
                      +|+++++.|+|++..+...|||||.+.|+-++
T Consensus       293 ~~~~~~v~~~gmp~~~~~~g~lyi~~~v~fp~  324 (337)
T KOG0712|consen  293 PGDTKRVEGEGMPIFRNPKGDLYIKFEVKFPK  324 (337)
T ss_pred             hhHEEeecCCCcccccCCCCcEEEEEEEEcCC
Confidence            99999999999996655599999999999776

>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.34  E-value=6.2e-08  Score=93.34  Aligned_cols=55  Identities=36%  Similarity=0.656  Sum_probs=45.8

Q ss_pred             CCCCcchhhhcCCCCC-------------------------------------ce-eccCccccccccccchhhhhCCCC
Q 016833            8 KSDNTKYYEILGVSKK-------------------------------------RF-VLSDPEKREIYDQYGEDALKEGMG   49 (382)
Q Consensus         8 ~~~~~~~Y~iLgv~~~-------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g~~   49 (382)
                      |+.++|||+||||+.+                                     || ||+|+++|+.||.+|..+...   
T Consensus         1 M~~~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~~~---   77 (296)
T KOG0691|consen    1 MVKDTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDEESRAAYDKLRKSGSSA---   77 (296)
T ss_pred             CcccchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhcccc---
Confidence            6679999999999988                                     99 999999999999998766432   


Q ss_pred             CCCCCCCchhhhhcccCC
Q 016833           50 GGGGAHDPFDIFQSFFGG   67 (382)
Q Consensus        50 ~~~~~~~~~d~F~~~Fgg   67 (382)
                        .+..++.++|...|++
T Consensus        78 --~~~~d~~~~~r~~f~~   93 (296)
T KOG0691|consen   78 --QGREDQADGFRKKFGS   93 (296)
T ss_pred             --hhhhhHHHHHHHHhhh
Confidence              1345778889988874

>TIGR02642 phage_xxxx uncharacterized phage protein

Probab=98.32  E-value=8.4e-07  Score=80.01  Aligned_cols=51  Identities=22%  Similarity=0.454  Sum_probs=46.4

Q ss_pred             cccCCCCcceeEEecCCCCCCCCCCceEEEeceEEEEEeccCCCCCCEEEeC
Q 016833          153 QHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFP  204 (382)
Q Consensus       153 ~~~C~~C~G~G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G~~~g~~i~~~  204 (382)
                      +.+|+.|+|+|+++..+++|+.|+|.|.++.++.+.+++ .|+.+|++|++.
T Consensus        99 ~~~C~~C~G~G~~i~~~~~C~~C~G~G~v~~~~~~~~k~-~g~~~g~~it~~  149 (186)
T TIGR02642        99 SCKCPRCRGTGLIQRRQRECDTCAGTGRFRPTVEDLLKS-FGVDSGAAIVLK  149 (186)
T ss_pred             CCcCCCCCCeeEEecCCCCCCCCCCccEEeeeEEEEEEe-eeccCCceeeHH
Confidence            567899999999888778999999999999999999999 999999999885

This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.

>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=98.22  E-value=2.8e-06  Score=77.29  Aligned_cols=48  Identities=25%  Similarity=0.405  Sum_probs=45.0

Q ss_pred             EEeccCCCCCCEEEeCCCCCCCCCCCCccEEEEEEEecCCccccccccc
Q 016833          189 VIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDL  237 (382)
Q Consensus       189 V~Ip~G~~~g~~i~~~geG~~~~g~~~GDl~v~i~~k~h~~F~R~g~DL  237 (382)
                      +.++.++..+..+++.+++...+ ...++.+..+..++|+.|...++++
T Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  227 (237)
T COG2214         180 STIKAGALEGKALRLKGLLKSAR-GALGKARLKELSKRHPPFALEGDDK  227 (237)
T ss_pred             ccCCcccccCceeeecccCCcCC-CCcccceeeeeccCCCCccccCCcc
Confidence            78999999999999999998766 7789999999999999999999999

>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.10  E-value=7.4e-07  Score=83.65  Aligned_cols=38  Identities=45%  Similarity=0.865  Sum_probs=34.1

Q ss_pred             CCCCcchhhhcCCCCC-------------------------------------ce-eccCccccccccccchhhhh
Q 016833            8 KSDNTKYYEILGVSKK-------------------------------------RF-VLSDPEKREIYDQYGEDALK   45 (382)
Q Consensus         8 ~~~~~~~Y~iLgv~~~-------------------------------------AY-vLsD~~KR~~YD~~G~~g~~   45 (382)
                      .+..-+||+|||++++                                     || |||||.||..||.||+.++.
T Consensus        27 ~~~~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~~l~  102 (279)
T KOG0716|consen   27 DVIRLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDNPEATDKFKEINTAYAILSDPTKRNVYDEYGELGLK  102 (279)
T ss_pred             ccchhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCCchhHHHHHHHHHHHHHhcChhhhhhHHHhhhHHHH
Confidence            3446689999999999                                     99 99999999999999998875

>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=97.80  E-value=6.1e-06  Score=81.79  Aligned_cols=55  Identities=49%  Similarity=0.944  Sum_probs=42.4

Q ss_pred             CCCCCcchhhhcCCCCC--------------------------------------ce-eccCccccccccccchhhhhCC
Q 016833            7 KKSDNTKYYEILGVSKK--------------------------------------RF-VLSDPEKREIYDQYGEDALKEG   47 (382)
Q Consensus         7 ~~~~~~~~Y~iLgv~~~--------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g   47 (382)
                      +|++.+|||.||||+++                                      || |||||.||..||. |.+ +...
T Consensus       368 kkSkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r~ds-g~d-le~~  445 (486)
T KOG0550|consen  368 KKSKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVRFDS-GQD-LEEV  445 (486)
T ss_pred             HHhhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhhccc-ccc-hhhh
Confidence            36778999999999998                                      99 9999999999997 332 2221


Q ss_pred             CCCCCCCCCchhhhhcc
Q 016833           48 MGGGGGAHDPFDIFQSF   64 (382)
Q Consensus        48 ~~~~~~~~~~~d~F~~~   64 (382)
                      . +++++++|+++|..|
T Consensus       446 ~-~~~a~~dp~~~~~a~  461 (486)
T KOG0550|consen  446 G-SGGAGFDPFNIFRAF  461 (486)
T ss_pred             c-CCCcCcChhhhhhhc
Confidence            1 223567899999887

>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]

Probab=97.79  E-value=1.2e-05  Score=82.38  Aligned_cols=13  Identities=23%  Similarity=0.284  Sum_probs=7.1

Q ss_pred             HHHHHHHhCCCCC
Q 016833          315 QCKMLETVLPPRT  327 (382)
Q Consensus       315 ~~~~l~~~lp~~~  327 (382)
                      -+..+++.|..+.
T Consensus       296 Vr~rid~ald~~A  308 (715)
T COG1107         296 VRKRIDEALDRRA  308 (715)
T ss_pred             HHHHHHHHHhhcc
Confidence            3555666665443

>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation

Probab=97.72  E-value=1.3e-05  Score=60.49  Aligned_cols=53  Identities=34%  Similarity=0.831  Sum_probs=34.8

Q ss_pred             cCcceeEEeeceeeeCCCCCCCCccCC----------CcccCCCCCcccEEEEEEecCCccceeecccCCCCccee
Q 016833           98 YNGTSKKLSLSRNVICTKCKGKGSKSG----------ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTG  163 (382)
Q Consensus        98 ~~G~~~~i~~~r~~~C~~C~G~G~~~~----------~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G  163 (382)
                      ++|...+ .-.....|+.|+|+|....          ...+|+.|+|+|.++            ...+|+.|+|.|
T Consensus         4 C~G~G~~-~~~~~~~C~~C~G~G~~~~~~~~~~~~~~~~~~C~~C~G~G~~i------------~~~~C~~C~G~g   66 (66)
T PF00684_consen    4 CNGTGAK-PGKKPKTCPQCNGSGQVTRRQQTPGGVFQMQQTCPKCGGTGKII------------EKDPCKTCKGSG   66 (66)
T ss_dssp             CTTTSB--STTT-EE-TTSSSSSEEEEEEESSSTTEEEEEE-TTTSSSSEE-------------TSSB-SSSTTSS
T ss_pred             CCCcccC-CCCCCcCCcCCCCeeEEEEEEeCCCeEEEEEEECCCCcceeeEE------------CCCCCCCCCCcC
Confidence            4455543 3345679999999998642          236899999999864            268999999986

DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.

>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=97.72  E-value=5.3e-06  Score=76.32  Aligned_cols=32  Identities=44%  Similarity=0.908  Sum_probs=29.1

Q ss_pred             CCcchhhhcCCCCC---------------------------------------ce-eccCccccccccccch
Q 016833           10 DNTKYYEILGVSKK---------------------------------------RF-VLSDPEKREIYDQYGE   41 (382)
Q Consensus        10 ~~~~~Y~iLgv~~~---------------------------------------AY-vLsD~~KR~~YD~~G~   41 (382)
                      +.+|+|+||||.++                                       || ||||++||++||+-|.
T Consensus        12 ~~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~   83 (264)
T KOG0719|consen   12 NKKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETGS   83 (264)
T ss_pred             cccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCC
Confidence            34499999999999                                       99 9999999999999875

>KOG2813 consensus Predicted molecular chaperone, contains DnaJ domain [Posttranslational modification, protein turnover, chaperones]

Probab=97.58  E-value=7.5e-05  Score=71.55  Aligned_cols=60  Identities=33%  Similarity=0.840  Sum_probs=43.9

Q ss_pred             eeeCCCCCCCCccC--------------------CCcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCC
Q 016833          110 NVICTKCKGKGSKS--------------------GASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDK  169 (382)
Q Consensus       110 ~~~C~~C~G~G~~~--------------------~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k  169 (382)
                      ...|+.|+|.|..+                    +....|..|+|+|.                .+|++|+|+|.     
T Consensus       198 ~~vc~gc~g~G~~~y~~~~~m~c~sc~G~~~~k~gt~~~C~~C~G~G~----------------~~C~tC~grG~-----  256 (406)
T KOG2813|consen  198 AMVCHGCSGSGSNSYGIGTPMHCMSCTGVPPPKIGTHDLCYMCHGRGI----------------KECHTCKGRGK-----  256 (406)
T ss_pred             ceeccCcCCCCccccccCcceecccccCCCCCCCCccchhhhccCCCc----------------ccCCcccCCCC-----
Confidence            47799999999432                    12245777777774                57999999886     


Q ss_pred             CCCCCCCCceEEEeceEEEEE
Q 016833          170 DRCPQCKGEKVIQEKKVLEVI  190 (382)
Q Consensus       170 ~~C~~C~G~g~~~~~~~l~V~  190 (382)
                      .+|.+|.|.|-+..-..+.|.
T Consensus       257 k~C~TC~gtgsll~~t~~vV~  277 (406)
T KOG2813|consen  257 KPCTTCSGTGSLLNYTRIVVY  277 (406)
T ss_pred             cccccccCccceeeeEEEEEE
Confidence            689999999887776666665

>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=97.47  E-value=3.2e-05  Score=77.53  Aligned_cols=38  Identities=42%  Similarity=0.759  Sum_probs=33.1

Q ss_pred             CCCcchhhhcCCCCC--------------------------------------ce-eccCccccccccccchhhhhC
Q 016833            9 SDNTKYYEILGVSKK--------------------------------------RF-VLSDPEKREIYDQYGEDALKE   46 (382)
Q Consensus         9 ~~~~~~Y~iLgv~~~--------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~   46 (382)
                      .+.+.||+||||+++                                      || |||||+.|+-||..-+.-|.+
T Consensus         5 ~~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hreqil~~   81 (508)
T KOG0717|consen    5 FKKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSHREQILRG   81 (508)
T ss_pred             hhhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHHHHhcC
Confidence            356799999999998                                      99 999999999999987766654

>PHA03102 Small T antigen; Reviewed

Probab=97.45  E-value=2.6e-05  Score=68.33  Aligned_cols=52  Identities=17%  Similarity=0.263  Sum_probs=41.3

Q ss_pred             CCcchhhhcCCCCC-----------------------------------ce-eccCccccccccccchhhhhCCCCCCCC
Q 016833           10 DNTKYYEILGVSKK-----------------------------------RF-VLSDPEKREIYDQYGEDALKEGMGGGGG   53 (382)
Q Consensus        10 ~~~~~Y~iLgv~~~-----------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g~~~~~~   53 (382)
                      ....+|++|||+++                                   || ||+|+.+|..||.+|++.....      
T Consensus         3 e~~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~~~~~------   76 (153)
T PHA03102          3 ESKELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGDEEKMKELNTLYKKFRESVKSLRDLDGEEDSSSEE------   76 (153)
T ss_pred             hHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCchhHHHHHHHHHHHHHhhHHHhccccccCCcccccc------
Confidence            34579999999986                                   99 9999999999999998654321      


Q ss_pred             CCCchhhhhcccCC
Q 016833           54 AHDPFDIFQSFFGG   67 (382)
Q Consensus        54 ~~~~~d~F~~~Fgg   67 (382)
                      ...+.++|.++||+
T Consensus        77 ~~~~~~~f~~~fg~   90 (153)
T PHA03102         77 EDVPSGYVGATFGD   90 (153)
T ss_pred             cccHHHHhhhhcCC
Confidence            12377889988874

>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []

Probab=97.43  E-value=1.7e-05  Score=58.91  Aligned_cols=14  Identities=57%  Similarity=1.132  Sum_probs=13.7

Q ss_pred             ce-eccCcccccccc
Q 016833           24 RF-VLSDPEKREIYD   37 (382)
Q Consensus        24 AY-vLsD~~KR~~YD   37 (382)
                      || +|+||.+|+.||
T Consensus        50 Ay~~L~~~~~R~~YD   64 (64)
T PF00226_consen   50 AYEILSDPERRRRYD   64 (64)
T ss_dssp             HHHHHHSHHHHHHHH
T ss_pred             HHHHhCCHHHHHhcC
Confidence            99 999999999998

Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....

>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ

Probab=97.42  E-value=0.00061  Score=72.72  Aligned_cols=93  Identities=13%  Similarity=-0.014  Sum_probs=69.1

Q ss_pred             CccccccccceeeeccCHHHHhCCCEEEEEe----c--CC-------cEEEEEeCCCccccCCcEEEEcCCCCCCCCCCC
Q 016833          228 PKFKRKGDDLFVEHTLSLTEALCGFQFVITH----L--DG-------RQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPF  294 (382)
Q Consensus       228 ~~F~R~g~DL~~~~~I~l~eAl~G~~~~i~t----l--dG-------~~l~i~~p~g~vi~~g~~~~i~g~GmP~~~~~~  294 (382)
                      +.|-...-||.+.+.|+|.++..|++.+|+.    +  +|       +.|.|.||+|  ++.|+.++++|+|-...   +
T Consensus       650 ~~~~~~~~dI~y~l~vtLEeLY~G~tKkIKitR~V~~g~G~ktvkE~ktLeVkIPpG--VkdGqkIRf~GeGDegp---g  724 (871)
T TIGR03835       650 PNLDETNVNLVYEEEVPQILFFNNQIKEIKYTRHTVDGNTESTTNEAITLEIQLPIT--SQLNISAIFKGFGHDFG---N  724 (871)
T ss_pred             CCccccccceEEecccCHHHHhCCCeEEEEEEEeeccCCCcceeeeeEEEEEecCCC--CCCCCEEEeccccCCCC---C
Confidence            3444556789999999999999999988832    2  22       3689999999  89999999999998642   2


Q ss_pred             CCCcEEEEEEEECCCCCCH--------HHHHHHHHhCCC
Q 016833          295 MRGKLYIHFTVDFPESLSP--------DQCKMLETVLPP  325 (382)
Q Consensus       295 ~~GdL~i~~~V~~P~~l~~--------~~~~~l~~~lp~  325 (382)
                      ..|||||.|.|.-...+..        -.+.+.+.||..
T Consensus       725 g~GDLyVvIkVKPHp~FrRdGdDL~~~v~ISL~EALLGg  763 (871)
T TIGR03835       725 GCGDLKVVFKVIPSNFFQIKNDGLHVAALVDPLVAYNGG  763 (871)
T ss_pred             CCCCEEEEEEEcCCCCeEEECCeEEEEEecCHHHHhcCC
Confidence            2499999999885454332        235666666654

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.

>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]

Probab=97.00  E-value=0.00075  Score=69.64  Aligned_cols=28  Identities=29%  Similarity=0.341  Sum_probs=13.6

Q ss_pred             eccCHHHHh---CCCEEEEEecCCcEEEEEeCCC
Q 016833          241 HTLSLTEAL---CGFQFVITHLDGRQLLIKSQPG  271 (382)
Q Consensus       241 ~~I~l~eAl---~G~~~~i~tldG~~l~i~~p~g  271 (382)
                      ++.++..+|   .|-++.|.   |..+.|+..+|
T Consensus       200 ~~r~~i~~id~~ig~tV~I~---GeV~qikqT~G  230 (715)
T COG1107         200 LPRTLIDDLDEMIGKTVRIE---GEVTQIKQTSG  230 (715)
T ss_pred             cccccHHHHHhhcCceEEEE---EEEEEEEEcCC
Confidence            344444444   55555543   55555554443

>PLN03165 chaperone protein dnaJ-related; Provisional

Probab=96.65  E-value=0.0014  Score=54.38  Aligned_cols=49  Identities=33%  Similarity=0.759  Sum_probs=37.5

Q ss_pred             cccCcceeEEeeceeeeCCCCCCCCccC----C-C--cccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEec
Q 016833           96 DLYNGTSKKLSLSRNVICTKCKGKGSKS----G-A--SMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETIN  167 (382)
Q Consensus        96 e~~~G~~~~i~~~r~~~C~~C~G~G~~~----~-~--~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~  167 (382)
                      ..++|...       ..|+.|+|+|...    + .  ..+|+.|+|+|..                .|+.|.|+|.+.+
T Consensus        45 ~~C~GsG~-------~~C~~C~G~G~v~~~~~g~~q~~~~C~~C~G~Gk~----------------~C~~C~G~G~~~~  100 (111)
T PLN03165         45 FPCSGTGA-------QVCRFCVGSGNVTVELGGGEKEVSKCINCDGAGSL----------------TCTTCQGSGIQPR  100 (111)
T ss_pred             CCCCCCCC-------cCCCCCcCcCeEEEEeCCcEEEEEECCCCCCccee----------------eCCCCCCCEEEee
Confidence            66777765       2799999999753    1 1  2589999999952                3999999998754

>PRK01356 hscB co-chaperone HscB; Provisional

Probab=96.32  E-value=0.00081  Score=60.01  Aligned_cols=15  Identities=33%  Similarity=0.428  Sum_probs=14.2

Q ss_pred             ce-eccCccccccccc
Q 016833           24 RF-VLSDPEKREIYDQ   38 (382)
Q Consensus        24 AY-vLsD~~KR~~YD~   38 (382)
                      || ||+||.+|+.|+-
T Consensus        56 AY~~L~dp~~Ra~YlL   71 (166)
T PRK01356         56 AYSTLKDALKRAEYML   71 (166)
T ss_pred             HHHHhCCHHHHHHHHH
Confidence            99 9999999999975

>PRK05014 hscB co-chaperone HscB; Provisional

Probab=96.30  E-value=0.00094  Score=59.89  Aligned_cols=15  Identities=33%  Similarity=0.472  Sum_probs=14.2

Q ss_pred             ce-eccCccccccccc
Q 016833           24 RF-VLSDPEKREIYDQ   38 (382)
Q Consensus        24 AY-vLsD~~KR~~YD~   38 (382)
                      || ||+||.+|+.|+-
T Consensus        57 AY~~L~dp~~Ra~Yll   72 (171)
T PRK05014         57 AYQTLKHPLKRAEYLL   72 (171)
T ss_pred             HHHHHCChhHHHHHHH
Confidence            99 9999999999984

>KOG2813 consensus Predicted molecular chaperone, contains DnaJ domain [Posttranslational modification, protein turnover, chaperones]

Probab=95.98  E-value=0.004  Score=60.01  Aligned_cols=76  Identities=29%  Similarity=0.720  Sum_probs=43.8

Q ss_pred             ccccCcceeEEeece---eeeCCCCCCCCccCCCcccCCCCCcccEE--------EEEEecC-CccceeecccCCCCcce
Q 016833           95 EDLYNGTSKKLSLSR---NVICTKCKGKGSKSGASMKCSGCQGSGMK--------VSIRHLG-PSMIQQMQHPCNECKGT  162 (382)
Q Consensus        95 ee~~~G~~~~i~~~r---~~~C~~C~G~G~~~~~~~~C~~C~G~G~~--------~~~~~~g-pg~~~~~~~~C~~C~G~  162 (382)
                      --++.|-+..+.++.   ...|..|.|.|     ...|+.|+|.|.-        --..-.| |-----....|..|+|+
T Consensus       169 p~mf~~~~~~~~vphs~~v~~ch~c~gRG-----~~vc~gc~g~G~~~y~~~~~m~c~sc~G~~~~k~gt~~~C~~C~G~  243 (406)
T KOG2813|consen  169 PGMFSGVAHPAVVPHSMIVTFCHACLGRG-----AMVCHGCSGSGSNSYGIGTPMHCMSCTGVPPPKIGTHDLCYMCHGR  243 (406)
T ss_pred             CCcccccccceeccchHhhhhhhcccCCC-----ceeccCcCCCCccccccCcceecccccCCCCCCCCccchhhhccCC
Confidence            345555555554443   36799999999     4689999999931        1111111 00000113456677777


Q ss_pred             eEEecCCCCCCCCCCceE
Q 016833          163 GETINDKDRCPQCKGEKV  180 (382)
Q Consensus       163 G~~~~~k~~C~~C~G~g~  180 (382)
                      |.     ..|.+|+|+|.
T Consensus       244 G~-----~~C~tC~grG~  256 (406)
T KOG2813|consen  244 GI-----KECHTCKGRGK  256 (406)
T ss_pred             Cc-----ccCCcccCCCC
Confidence            65     56777777664

>PRK03578 hscB co-chaperone HscB; Provisional

Probab=95.91  E-value=0.0019  Score=58.15  Aligned_cols=15  Identities=40%  Similarity=0.567  Sum_probs=14.3

Q ss_pred             ce-eccCccccccccc
Q 016833           24 RF-VLSDPEKREIYDQ   38 (382)
Q Consensus        24 AY-vLsD~~KR~~YD~   38 (382)
                      || +|+||.+|+.|+-
T Consensus        62 AY~tL~~p~~Ra~Yll   77 (176)
T PRK03578         62 AYQTLRDPLKRARYLL   77 (176)
T ss_pred             HHHHhCChhhHHHHHH
Confidence            99 9999999999994

>PRK00294 hscB co-chaperone HscB; Provisional

Probab=95.76  E-value=0.0024  Score=57.30  Aligned_cols=15  Identities=27%  Similarity=0.521  Sum_probs=14.3

Q ss_pred             ce-eccCccccccccc
Q 016833           24 RF-VLSDPEKREIYDQ   38 (382)
Q Consensus        24 AY-vLsD~~KR~~YD~   38 (382)
                      || ||+||.+|+.|+-
T Consensus        60 AY~~L~~p~~Ra~YlL   75 (173)
T PRK00294         60 AYQTLKSPPRRARYLL   75 (173)
T ss_pred             HHHHhCChhhhHHHHH
Confidence            99 9999999999994

>TIGR02642 phage_xxxx uncharacterized phage protein

Probab=95.75  E-value=0.0064  Score=55.05  Aligned_cols=30  Identities=37%  Similarity=0.847  Sum_probs=15.5

Q ss_pred             ccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEec
Q 016833          127 MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETIN  167 (382)
Q Consensus       127 ~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~  167 (382)
                      .+|+.|+|+|.++.           ...+|+.|+|+|++..
T Consensus       100 ~~C~~C~G~G~~i~-----------~~~~C~~C~G~G~v~~  129 (186)
T TIGR02642       100 CKCPRCRGTGLIQR-----------RQRECDTCAGTGRFRP  129 (186)
T ss_pred             CcCCCCCCeeEEec-----------CCCCCCCCCCccEEee
Confidence            34555555555441           1245666666666543

This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.

>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=95.53  E-value=0.0027  Score=63.98  Aligned_cols=36  Identities=31%  Similarity=0.522  Sum_probs=31.2

Q ss_pred             CCCCCCCCCcchhhhcCCCCC------------------------------------ce-eccCccccccccc
Q 016833            3 GRAPKKSDNTKYYEILGVSKK------------------------------------RF-VLSDPEKREIYDQ   38 (382)
Q Consensus         3 ~~~~~~~~~~~~Y~iLgv~~~------------------------------------AY-vLsD~~KR~~YD~   38 (382)
                      +|.++..+..|.|.+|||+++                                    || ||+|++||+.||+
T Consensus       226 drl~re~~~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~~~~A~Eafk~Lq~Afevig~~~kR~eYd~  298 (490)
T KOG0720|consen  226 DRLSRELNILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNMIPRAEEAFKKLQVAFEVIGDSVKRKEYDL  298 (490)
T ss_pred             HhhhhhhcCCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccCChhHHHHHHHHHHHHHHhcchhhhhHHHH
Confidence            345555667899999999988                                    99 9999999999997

>smart00271 DnaJ DnaJ molecular chaperone homology domain

Probab=94.44  E-value=0.012  Score=42.60  Aligned_cols=12  Identities=67%  Similarity=1.215  Sum_probs=10.8

Q ss_pred             cchhhhcCCCCC
Q 016833           12 TKYYEILGVSKK   23 (382)
Q Consensus        12 ~~~Y~iLgv~~~   23 (382)
                      ++||+||||+++
T Consensus         1 ~~~y~vLgl~~~   12 (60)
T smart00271        1 TDYYEILGVPRD   12 (60)
T ss_pred             CCHHHHcCCCCC
Confidence            489999999988

>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=93.58  E-value=0.017  Score=53.11  Aligned_cols=35  Identities=31%  Similarity=0.637  Sum_probs=31.3

Q ss_pred             CCCcchhhhcCCCCC-------------------------------------ce-eccCccccccccccchhh
Q 016833            9 SDNTKYYEILGVSKK-------------------------------------RF-VLSDPEKREIYDQYGEDA   43 (382)
Q Consensus         9 ~~~~~~Y~iLgv~~~-------------------------------------AY-vLsD~~KR~~YD~~G~~g   43 (382)
                      ....|.|||||++++                                     || -|+|++.|+.|..||+..
T Consensus        96 ~~~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~PD  168 (230)
T KOG0721|consen   96 RQKFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEEGDEEFFEAIAKAYQALTDKKSRENWEKYGNPD  168 (230)
T ss_pred             hhcCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcchhHHHHHHHHHHHHHhcchhhHHHHHHhCCCC
Confidence            456689999999998                                     99 999999999999999753

>PRK01773 hscB co-chaperone HscB; Provisional

Probab=93.47  E-value=0.019  Score=51.62  Aligned_cols=14  Identities=29%  Similarity=0.290  Sum_probs=13.1

Q ss_pred             ce-eccCcccccccc
Q 016833           24 RF-VLSDPEKREIYD   37 (382)
Q Consensus        24 AY-vLsD~~KR~~YD   37 (382)
                      || +|+||-+|+.|=
T Consensus        58 AY~tLkdPl~RA~YL   72 (173)
T PRK01773         58 ALQILKDPILRAEAI   72 (173)
T ss_pred             HHHHHCChHHHHHHH
Confidence            99 999999999883

>cd06257 DnaJ DnaJ domain or J-domain

Probab=91.60  E-value=0.059  Score=38.16  Aligned_cols=11  Identities=55%  Similarity=1.123  Sum_probs=10.1

Q ss_pred             chhhhcCCCCC
Q 016833           13 KYYEILGVSKK   23 (382)
Q Consensus        13 ~~Y~iLgv~~~   23 (382)
                      +||++|||+++
T Consensus         1 ~~y~vLgl~~~   11 (55)
T cd06257           1 DYYDILGVPPD   11 (55)
T ss_pred             ChHHHcCCCCC
Confidence            69999999988

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.

>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]

Probab=91.21  E-value=0.043  Score=51.98  Aligned_cols=16  Identities=38%  Similarity=0.380  Sum_probs=15.0

Q ss_pred             ce-eccCcccccccccc
Q 016833           24 RF-VLSDPEKREIYDQY   39 (382)
Q Consensus        24 AY-vLsD~~KR~~YD~~   39 (382)
                      || ||+|+.+|.+||.-
T Consensus        97 A~evL~D~~~R~qyDS~  113 (379)
T COG5269          97 AREVLGDRKLRLQYDSN  113 (379)
T ss_pred             HHHHhccHHHHhhcccc
Confidence            99 99999999999973

>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=87.94  E-value=0.16  Score=47.97  Aligned_cols=29  Identities=34%  Similarity=0.724  Sum_probs=25.9

Q ss_pred             CcchhhhcCCCCC------------------------------------ce-eccCcccccccccc
Q 016833           11 NTKYYEILGVSKK------------------------------------RF-VLSDPEKREIYDQY   39 (382)
Q Consensus        11 ~~~~Y~iLgv~~~------------------------------------AY-vLsD~~KR~~YD~~   39 (382)
                      ..|-|++|||+++                                    || +|.|.+-|..||-+
T Consensus        32 ~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~~e~k~~F~~iAtayeilkd~e~rt~ydya   97 (329)
T KOG0722|consen   32 AENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRDPESKKLFVKIATAYEILKDNETRTQYDYA   97 (329)
T ss_pred             chhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCCchhhhhhhhhhcccccccchhhHHhHHHH
Confidence            3578999999988                                    99 99999999999964

>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs

Probab=87.81  E-value=0.47  Score=41.47  Aligned_cols=22  Identities=36%  Similarity=0.848  Sum_probs=11.0

Q ss_pred             eCCCCCCCCccCCCcccCCCCCcccEE
Q 016833          112 ICTKCKGKGSKSGASMKCSGCQGSGMK  138 (382)
Q Consensus       112 ~C~~C~G~G~~~~~~~~C~~C~G~G~~  138 (382)
                      .|..|.|.+.     .+|..|+|+=.+
T Consensus       101 ~C~~Cgg~rf-----v~C~~C~Gs~k~  122 (147)
T cd03031         101 VCEGCGGARF-----VPCSECNGSCKV  122 (147)
T ss_pred             CCCCCCCcCe-----EECCCCCCcceE
Confidence            4555555542     245555555444

This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.

>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]

Probab=84.96  E-value=0.23  Score=50.43  Aligned_cols=20  Identities=35%  Similarity=0.718  Sum_probs=18.2

Q ss_pred             ce-eccCccccccccccchhh
Q 016833           24 RF-VLSDPEKREIYDQYGEDA   43 (382)
Q Consensus        24 AY-vLsD~~KR~~YD~~G~~g   43 (382)
                      || .|+|+..|+.|=.||.-.
T Consensus       152 AY~~lTd~k~renyl~yGtPd  172 (610)
T COG5407         152 AYGLLTDKKRRENYLNYGTPD  172 (610)
T ss_pred             HHHhhhhHHHHHHHHhcCCCC
Confidence            99 999999999999998643

>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=83.27  E-value=0.45  Score=46.22  Aligned_cols=64  Identities=27%  Similarity=0.558  Sum_probs=45.9

Q ss_pred             cccccCcceeEEeeceeeeCCCCCCCCccC-----CCc-ccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEec
Q 016833           94 LEDLYNGTSKKLSLSRNVICTKCKGKGSKS-----GAS-MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETIN  167 (382)
Q Consensus        94 lee~~~G~~~~i~~~r~~~C~~C~G~G~~~-----~~~-~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~  167 (382)
                      ..+.+.|...+ .......|..|.|+|...     ... .+|..|+|.|.+.             ...|..|.|.|.+..
T Consensus       166 ~~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~c~~~~~~~-------------~~~c~~~~g~~~v~~  231 (288)
T KOG0715|consen  166 DCETCFGSGAE-EGAKRESCKTCSGRGLVSNPKEDPFILYTCSYCLGRGLVL-------------RDNCQACSGAGQVRR  231 (288)
T ss_pred             ccccccCcCcc-cccccccchhhhCcccccccccCCcceeecccccccceec-------------cchHHHhhcchhhhh
Confidence            34666676644 556678999999999332     122 3699999999876             344999999997665


Q ss_pred             CCCC
Q 016833          168 DKDR  171 (382)
Q Consensus       168 ~k~~  171 (382)
                      .+..
T Consensus       232 ~k~i  235 (288)
T KOG0715|consen  232 AKDI  235 (288)
T ss_pred             heeE
Confidence            5444

>TIGR00630 uvra excinuclease ABC, A subunit

Probab=82.62  E-value=0.98  Score=50.74  Aligned_cols=34  Identities=35%  Similarity=0.752  Sum_probs=21.3

Q ss_pred             ccCCCCCcccEEEEEEecCCccceeecccCCCCcceeE
Q 016833          127 MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGE  164 (382)
Q Consensus       127 ~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~  164 (382)
                      -.|+.|.|.|++..-.+.-+    .+..+|+.|+|+..
T Consensus       737 G~C~~C~G~G~~~~~~~f~~----~~~~~C~~C~G~R~  770 (924)
T TIGR00630       737 GRCEACQGDGVIKIEMHFLP----DVYVPCEVCKGKRY  770 (924)
T ss_pred             CCCCCCccceEEEEEccCCC----CcccCCCCcCCcee
Confidence            46999999998764333322    33556666666654

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>KOG2824 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]

Probab=82.54  E-value=1  Score=43.01  Aligned_cols=51  Identities=31%  Similarity=0.678  Sum_probs=26.3

Q ss_pred             eeCCCCCCCCccCCCcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCC
Q 016833          111 VICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCK  176 (382)
Q Consensus       111 ~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~  176 (382)
                      -.|..|.|.+.     .+|..|+|+=.+...- -.-+    .-..|..|+-.|.+     +|+.|.
T Consensus       230 ~~C~~CGg~rF-----lpC~~C~GS~kv~~~~-~~~~----~~~rC~~CNENGLv-----rCp~Cs  280 (281)
T KOG2824|consen  230 GVCESCGGARF-----LPCSNCHGSCKVHEEE-EDDG----GVLRCLECNENGLV-----RCPVCS  280 (281)
T ss_pred             CcCCCcCCcce-----EecCCCCCceeeeeec-cCCC----cEEECcccCCCCce-----eCCccC
Confidence            45666666553     3577777766554310 0001    12456666666653     466653

>PHA02624 large T antigen; Provisional

Probab=80.37  E-value=0.38  Score=51.13  Aligned_cols=29  Identities=14%  Similarity=0.319  Sum_probs=25.7

Q ss_pred             CCCCcchhhhcCCCCC-----------------------------------ce-eccCccccccc
Q 016833            8 KSDNTKYYEILGVSKK-----------------------------------RF-VLSDPEKREIY   36 (382)
Q Consensus         8 ~~~~~~~Y~iLgv~~~-----------------------------------AY-vLsD~~KR~~Y   36 (382)
                      .....+||++|||+++                                   || +|+|+.+|+.|
T Consensus         7 ree~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgGdeekfk~Ln~AYevL~d~~k~~r~   71 (647)
T PHA02624          7 REESKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGGDEEKMKRLNSLYKKLQEGVKSARQ   71 (647)
T ss_pred             hHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCcHHHHHHHHHHHHHHhcHHHhhhc
Confidence            3445699999999997                                   99 99999999999

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	382
1nlt_A	248	The Crystal Structure Of Hsp40 Ydj1 Length = 248		3e-45
3agz_A	190	Crystal Structure Of Human Hsp40 Hdj1 Peptide-Bindi		1e-24
2qld_A	183	Human Hsp40 Hdj1 Length = 183		1e-24
3agx_A	181	Crystal Structure Of Human Hsp40 Hdj1 Peptide-Bindi		1e-24
2q2g_A	180	Crystal Structure Of Dimerization Domain Of Hsp40 F		5e-23
1c3g_A	170	S. Cerevisiae Heat Shock Protein 40 Sis1 Length = 1		2e-19
2b26_A	173	The Crystal Structure Of The Protein Complex Of Yea		3e-19
1xao_A	121	Hsp40-Ydj1 Dimerization Domain Length = 121		7e-13

>pdb|1NLT|A Chain A, The Crystal Structure Of Hsp40 Ydj1 Length = 248

Iteration: 1
 Score =  179 bits (454), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 92/227 (40%), Positives = 133/227 (58%), Gaps = 2/227 (0%)
Query: 84  EDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRH 143
           +D+ H +  SLE+LY G + KL+L++ ++                     G G+K   R 
Sbjct: 12  KDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQ 71
Query: 144 LGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITF 203
           +GP MIQ+ Q  C+ C GTG+ I+ KDRC  C G+KV  E+K+LEV VE GM++GQ+I F
Sbjct: 72  MGP-MIQRFQTECDVCHGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVF 130
Query: 204 PGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQ 263
            GEAD+APD + GD+VF++ ++ H  FKR GDDL  E  + L  A+ G +F + H+ G  
Sbjct: 131 KGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDW 190
Query: 264 LLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPES 310
           L +   PGEV+ P   K I  +GMP+ +     G L I FT+  PE+
Sbjct: 191 LKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGY-GNLIIKFTIKDPEN 236

>pdb|3AGZ|A Chain A, Crystal Structure Of Human Hsp40 Hdj1 Peptide-Binding Domain Complexed With A C-Terminal Peptide Of Hsp70 Length = 190

Iteration: 1
 Score =  110 bits (276), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 108/239 (45%), Gaps = 63/239 (26%)
Query: 86  VIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLG 145
           V H L+VSLE++Y+G +KK                                MK+S + L 
Sbjct: 14  VTHDLRVSLEEIYSGCTKK--------------------------------MKISHKRLN 41
Query: 146 PSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 205
           P                              G+ +  E K+L + V+KG + G KITFP 
Sbjct: 42  PD-----------------------------GKSIRNEDKILTIEVKKGWKEGTKITFPK 72
Query: 206 EADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLL 265
           E D+  + +  DIVFVL+ K H  FKR G D+     +SL EALCG    +  LDGR + 
Sbjct: 73  EGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIP 132
Query: 266 IKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 324
           +  +  +V++P   + +  EG+P+ + P  RG L I F V FPE +      +LE VLP
Sbjct: 133 VVFK--DVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLP 189

>pdb|2QLD|A Chain A, Human Hsp40 Hdj1 Length = 183

Iteration: 1
 Score =  110 bits (275), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 108/239 (45%), Gaps = 63/239 (26%)
Query: 86  VIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLG 145
           V H L+VSLE++Y+G +KK                                MK+S + L 
Sbjct: 7   VTHDLRVSLEEIYSGCTKK--------------------------------MKISHKRLN 34
Query: 146 PSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 205
           P                              G+ +  E K+L + V+KG + G KITFP 
Sbjct: 35  PD-----------------------------GKSIRNEDKILTIEVKKGWKEGTKITFPK 65
Query: 206 EADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLL 265
           E D+  + +  DIVFVL+ K H  FKR G D+     +SL EALCG    +  LDGR + 
Sbjct: 66  EGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIP 125
Query: 266 IKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 324
           +  +  +V++P   + +  EG+P+ + P  RG L I F V FPE +      +LE VLP
Sbjct: 126 VVFK--DVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLP 182

>pdb|3AGX|A Chain A, Crystal Structure Of Human Hsp40 Hdj1 Peptide-Binding Domain Length = 181

Iteration: 1
 Score =  110 bits (275), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 108/239 (45%), Gaps = 63/239 (26%)
Query: 86  VIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLG 145
           V H L+VSLE++Y+G +KK                                MK+S + L 
Sbjct: 5   VTHDLRVSLEEIYSGCTKK--------------------------------MKISHKRLN 32
Query: 146 PSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 205
           P                              G+ +  E K+L + V+KG + G KITFP 
Sbjct: 33  PD-----------------------------GKSIRNEDKILTIEVKKGWKEGTKITFPK 63
Query: 206 EADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLL 265
           E D+  + +  DIVFVL+ K H  FKR G D+     +SL EALCG    +  LDGR + 
Sbjct: 64  EGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIP 123
Query: 266 IKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 324
           +  +  +V++P   + +  EG+P+ + P  RG L I F V FPE +      +LE VLP
Sbjct: 124 VVFK--DVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLP 180

>pdb|2Q2G|A Chain A, Crystal Structure Of Dimerization Domain Of Hsp40 From Cryptosporidium Parvum, Cgd2_1800 Length = 180

Iteration: 1
 Score =  105 bits (261), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 56/146 (38%), Positives = 88/146 (60%), Gaps = 3/146 (2%)
Query: 179 KVIQEKKVLEVIVEKGMQNGQKITFPGEAD-EAPDTVTGDIVFVLQQKEHPKFKRKGDDL 237
           KV  E+ ++EV ++ G ++G K+T+ GE D E+P T  GD+V ++Q K HP+F R    L
Sbjct: 36  KVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLIIQTKTHPRFTRDDCHL 95
Query: 238 FVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRG 297
             + T+ L  AL GF   +T LD R L I  +  E+V P   K + +EG P+  +P  +G
Sbjct: 96  IXKVTIPLVRALTGFTCPVTTLDNRNLQIPIK--EIVNPKTRKIVPNEGXPIKNQPGQKG 153
Query: 298 KLYIHFTVDFPESLSPDQCKMLETVL 323
            L + F + FP+SL+P+Q K+++  L
Sbjct: 154 DLILEFDICFPKSLTPEQKKLIKEAL 179

>pdb|1C3G|A Chain A, S. Cerevisiae Heat Shock Protein 40 Sis1 Length = 170

Iteration: 1
 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 79/147 (53%), Gaps = 5/147 (3%)
Query: 176 KGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIV-FVLQQKEHPKFKRKG 234
           KG     EK  +++ ++ G + G KIT+  + D  P T     + FV+Q+K HP FKR G
Sbjct: 27  KGPHGASEKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDG 86
Query: 235 DDLFVEHTLSLTEALCGFQFVITHLDGRQL-LIKSQPGEVVKPDQFKAINDEGMPMYQRP 293
           DDL     LS  E+L GF   I  +DGR L L + QP   V+P Q      +GMP  + P
Sbjct: 87  DDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQP---VQPSQTSTYPGQGMPTPKNP 143
Query: 294 FMRGKLYIHFTVDFPESLSPDQCKMLE 320
             RG L + + VD+P SL+  Q + ++
Sbjct: 144 SQRGNLIVKYKVDYPISLNDAQKRAID 170

>pdb|2B26|A Chain A, The Crystal Structure Of The Protein Complex Of Yeast Hsp40 Sis1 And Hsp70 Ssa1 Length = 173

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 79/147 (53%), Gaps = 5/147 (3%)
Query: 176 KGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIV-FVLQQKEHPKFKRKG 234
           KG     EK  +++ ++ G + G KIT+  + D  P T     + FV+Q+K HP FKR G
Sbjct: 27  KGPHGASEKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDG 86
Query: 235 DDLFVEHTLSLTEALCGFQFVITHLDGRQL-LIKSQPGEVVKPDQFKAINDEGMPMYQRP 293
           DDL     LS  E+L GF   I  +DGR L L + QP   V+P Q      +GMP  + P
Sbjct: 87  DDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQP---VQPSQTSTYPGQGMPTPKNP 143
Query: 294 FMRGKLYIHFTVDFPESLSPDQCKMLE 320
             RG L + + VD+P SL+  Q + ++
Sbjct: 144 SQRGNLIVKYKVDYPISLNDAQKRAID 170

>pdb|1XAO|A Chain A, Hsp40-Ydj1 Dimerization Domain Length = 121

Iteration: 1
 Score = 71.6 bits (174), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 44/113 (38%), Positives = 60/113 (53%), Gaps = 4/113 (3%)
Query: 230 FKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPM 289
           FKR GDDL  E  + L  A+ G +F + H+ G  L +   PGEV+ P   K I  +GMP+
Sbjct: 2   FKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPI 61
Query: 290 YQRPFMRGKLYIHFTVDFPES--LSPDQCKMLETVLPPRTSVQL-TDMELDEC 339
             +    G L I FT+ FPE+   S +  K LE +LPPR    +     +DEC
Sbjct: 62  -PKYGGYGNLIIKFTIKFPENHFTSEENLKKLEEILPPRIVPAIPKKATVDEC 113

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	382
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	1e-128
3agx_A	181	DNAJ homolog subfamily B member 1; chaperone; 1.85	2e-86
3agx_A	181	DNAJ homolog subfamily B member 1; chaperone; 1.85	3e-06
2q2g_A	180	HSP40 protein, heat shock 40 kDa protein, putative	1e-78
1c3g_A	170	Heat shock protein 40; beta sheets, short helices,	2e-72
1xao_A	121	YDJ1, mitochondrial protein import protein MAS5; b	2e-50
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	4e-37
2ctt_A	104	DNAJ homolog subfamily A member 3; ZING finger, be	2e-18
3apq_A	210	DNAJ homolog subfamily C member 10; thioredoxin fo	8e-14
1exk_A	79	DNAJ protein; extended beta-hairpin, CXXCXGXG, zin	4e-13
2lgw_A	99	DNAJ homolog subfamily B member 2; J domain, HSJ1A	5e-12
2o37_A	92	Protein SIS1; HSP40, J-domain, cochaperone, APC900	2e-11
1bq0_A	103	DNAJ, HSP40; chaperone, heat shock, protein foldin	2e-11
2ctw_A	109	DNAJ homolog subfamily C member 5; J-domain, chape	4e-11
2dmx_A	92	DNAJ homolog subfamily B member 8; DNAJ J domain,	2e-10
2ctq_A	112	DNAJ homolog subfamily C member 12; J-domain, chap	1e-09
2ctr_A	88	DNAJ homolog subfamily B member 9; J-domain, chape	2e-08
1hdj_A	77	Human HSP40, HDJ-1; molecular chaperone; NMR {Homo	4e-08
2och_A	73	Hypothetical protein DNJ-12; HSP40, J-domain, chap	1e-07
2l6l_A	155	DNAJ homolog subfamily C member 24; DPH4, Zn-CSL,	4e-07
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	4e-07
2ej7_A	82	HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati	5e-07
3i38_A	109	Putative chaperone DNAJ; structural genomics, prot	5e-07
2pf4_E	174	Small T antigen; PP2A, SV40, DNAJ, aalpha subunit,	6e-07
2yua_A	99	Williams-beuren syndrome chromosome region 18 prot	6e-07
2cug_A	88	Mkiaa0962 protein; DNAJ-like domain, structural ge	3e-06
2ctp_A	78	DNAJ homolog subfamily B member 12; J-domain, chap	8e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-04
2dn9_A	79	DNAJ homolog subfamily A member 3; J-domain, TID1,	6e-05
2qsa_A	109	DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s	9e-05
3apo_A	780	DNAJ homolog subfamily C member 10; PDI family, th	1e-04
1wjz_A	94	1700030A21RIK protein; J-domain, DNAJ like protein	6e-04

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1 Length = 248

 Score =  368 bits (947), Expect = e-128
 Identities = 107/248 (43%), Positives = 157/248 (63%), Gaps = 2/248 (0%)

Query: 73  GSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGC 132
           G+ R R  +RG+D+ H +  SLE+LY G + KL+L++ ++C +C+G+G K GA  KC+ C
Sbjct: 1   GAQRPRGPQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGAVKKCTSC 60

Query: 133 QGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVE 192
            G G+K   R +GP MIQ+ Q  C+ C GTG+ I+ KDRC  C G+KV  E+K+LEV VE
Sbjct: 61  NGQGIKFVTRQMGP-MIQRFQTECDVCHGTGDIIDPKDRCKSCNGKKVENERKILEVHVE 119

Query: 193 KGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGF 252
            GM++GQ+I F GEAD+APD + GD+VF++ ++ H  FKR GDDL  E  + L  A+ G 
Sbjct: 120 PGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGG 179

Query: 253 QFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLS 312
           +F + H+ G  L +   PGEV+ P   K I  +GMP+ +     G L I FT+  PE+  
Sbjct: 180 EFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKDPENHF 238

Query: 313 PDQCKMLE 320
             +  + +
Sbjct: 239 TSEENLKK 246

>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A Length = 181

 Score =  258 bits (662), Expect = 2e-86
 Identities = 62/182 (34%), Positives = 94/182 (51%), Gaps = 3/182 (1%)

Query: 144 LGPSMIQQMQHPCNE-CKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKIT 202
           + P +   ++    E   G  + +    +     G+ +  E K+L + V+KG + G KIT
Sbjct: 1   MDPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKIT 60

Query: 203 FPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGR 262
           FP E D+  + +  DIVFVL+ K H  FKR G D+     +SL EALCG    +  LDGR
Sbjct: 61  FPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGR 120

Query: 263 QLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETV 322
            + +     +V++P   + +  EG+P+ + P  RG L I F V FPE +      +LE V
Sbjct: 121 TIPVV--FKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQV 178

Query: 323 LP 324
           LP
Sbjct: 179 LP 180

>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A Length = 181

 Score = 46.1 bits (110), Expect = 3e-06
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)

Query: 86  VIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKG 120
           V H L+VSLE++Y+G +KK+ +S         GK 
Sbjct: 5   VTHDLRVSLEEIYSGCTKKMKISHK--RLNPDGKS 37

>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II} Length = 180

 Score =  238 bits (610), Expect = 1e-78
 Identities = 59/163 (36%), Positives = 93/163 (57%), Gaps = 3/163 (1%)

Query: 162 TGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEAD-EAPDTVTGDIVF 220
            G+    K    +    KV  E+ ++EV ++ G ++G K+T+ GE D E+P T  GD+V 
Sbjct: 19  LGKRKKIKVTRKRFIEHKVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVL 78

Query: 221 VLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFK 280
           ++Q K HP+F R    L ++ T+ L  AL GF   +T LD R L I     E+V P   K
Sbjct: 79  IIQTKTHPRFTRDDCHLIMKVTIPLVRALTGFTCPVTTLDNRNLQIP--IKEIVNPKTRK 136

Query: 281 AINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVL 323
            + +EGMP+  +P  +G L + F + FP+SL+P+Q K+++  L
Sbjct: 137 IVPNEGMPIKNQPGQKGDLILEFDICFPKSLTPEQKKLIKEAL 179

>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A Length = 170

 Score =  222 bits (568), Expect = 2e-72
 Identities = 64/238 (26%), Positives = 91/238 (38%), Gaps = 69/238 (28%)

Query: 84  EDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRH 143
           E V   L VSLEDL+ G              K                      K+    
Sbjct: 1   ETVQVNLPVSLEDLFVG------------KKKS--------------------FKIG--- 25

Query: 144 LGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITF 203
                                           KG     EK  +++ ++ G + G KIT+
Sbjct: 26  -------------------------------RKGPHGASEKTQIDIQLKPGWKAGTKITY 54

Query: 204 PGEADEAPDTVT-GDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGR 262
             + D  P T     + FV+Q+K HP FKR GDDL     LS  E+L GF   I  +DGR
Sbjct: 55  KNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGR 114

Query: 263 QLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLE 320
            L +     + V+P Q      +GMP  + P  RG L + + VD+P SL+  Q + ++
Sbjct: 115 TLPLSR--VQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQKRAID 170

>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae} Length = 121

 Score =  164 bits (417), Expect = 2e-50
 Identities = 46/122 (37%), Positives = 63/122 (51%), Gaps = 7/122 (5%)

Query: 230 FKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPM 289
           FKR GDDL  E  + L  A+ G +F + H+ G  L +   PGEV+ P   K I  +GMP+
Sbjct: 2   FKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPI 61

Query: 290 YQRPFMRGKLYIHFTVDFPES--LSPDQCKMLETVLPPRTSVQLT-DMELDECEETTLHD 346
            +     G L I FT+ FPE+   S +  K LE +LPPR    +     +DEC    L D
Sbjct: 62  PKYG-GYGNLIIKFTIKFPENHFTSEENLKKLEEILPPRIVPAIPKKATVDECV---LAD 117

Query: 347 VN 348
            +
Sbjct: 118 FD 119

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A Length = 329

 Score =  135 bits (343), Expect = 4e-37
 Identities = 65/355 (18%), Positives = 101/355 (28%), Gaps = 121/355 (34%)

Query: 14  YYEILGVSK-----------------------------KRF--------VLSDPEKREIY 36
           YY ILGV                                +F        VL D ++R  Y
Sbjct: 30  YYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEY 89

Query: 37  DQYGEDALKEGMGGGGGAH-------DPFDIFQSFFGGSPFGGGSSRGRRQRRGEDVIHP 89
           DQ  +     G G     H       D  DIF S FG         R +   RG D+   
Sbjct: 90  DQLWQHRNDPGFGRQRQTHEQSYSQQDFDDIFSSMFGQ---QAHQRRRQHAARGHDLEIE 146

Query: 90  LKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLGPSMI 149
           + V LE+     ++ +S                                           
Sbjct: 147 VAVFLEETLAEQTRTISY------------------------------------------ 164

Query: 150 QQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADE 209
                P     G  E+   K                 L V +  G+ +GQ+I   G+   
Sbjct: 165 ---NLPVYNVFGMIESETPK----------------TLNVKIPAGVVDGQRIRLKGQGTP 205

Query: 210 APDT-VTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGR-QLLIK 267
             +    GD+  V+    HP F   G +L +   L+  EA  G +  +  L     L + 
Sbjct: 206 GENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVP 265

Query: 268 --SQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLE 320
             SQ G+ ++      I  +G+         G L+    +  P        ++ +
Sbjct: 266 PGSQAGQRLR------IKGKGLV---SKTHTGDLFAVIKIVMPTKPDEKARELWQ 311

>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 104

 Score = 78.8 bits (195), Expect = 2e-18
 Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 8/108 (7%)

Query: 83  GEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMK-CSGCQGSGMKVSI 141
           G      ++++      G +K+ +++    C +C GKG++ G  ++ C  C GSG   +I
Sbjct: 1   GSSGSSGMELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSG-METI 59

Query: 142 RHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEV 189
              GP +++     C  C G G  I     C  C+G    ++KK    
Sbjct: 60  NT-GPFVMRS---TCRRCGGRGSII--ISPCVVCRGAGQAKQKKRSGP 101

>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus} Length = 210

 Score = 69.1 bits (169), Expect = 8e-14
 Identities = 24/142 (16%), Positives = 37/142 (26%), Gaps = 53/142 (37%)

Query: 14  YYEILGVSK------------------------------KRF--------VLSDPEKREI 35
           +Y +LGVSK                                F        VL D + R+ 
Sbjct: 4   FYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKK 63

Query: 36  YDQYGEDALKEGMGGGGGAHDPFDIFQSFFGGSPFGGGSSRGRRQRRGEDVIHPLKVSLE 95
           YD+YGE  L++  GG   +   +      +   P      R                  +
Sbjct: 64  YDKYGEKGLEDNQGGQYESWSYYRYDFGIYDDDPEIITLERR---------------EFD 108

Query: 96  DLYNGTSKKLSLSRNVICTKCK 117
              N          +  C+ C 
Sbjct: 109 AAVNSGELWFVNFYSPGCSHCH 130

>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1 Length = 79

 Score = 63.4 bits (155), Expect = 4e-13
 Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 8/85 (9%)

Query: 100 GTSKKLSLSRNVICTKCKGKGSKSGASMK-CSGCQGSGMKVSIRHLGPSMIQQMQHPCNE 158
           G +K++ +     C  C G G+K G   + C  C GSG +V +R  G   +QQ    C  
Sbjct: 1   GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSG-QVQMRQ-GFFAVQQ---TCPH 55

Query: 159 CKGTGETINDKDRCPQCKGEKVIQE 183
           C+G G  I  KD C +C G   ++ 
Sbjct: 56  CQGRGTLI--KDPCNKCHGHGRVER 78

>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens} Length = 99

 Score = 60.8 bits (148), Expect = 5e-12
 Identities = 23/95 (24%), Positives = 27/95 (28%), Gaps = 39/95 (41%)

Query: 14 YYEILGVSK-------------------------------KRF--------VLSDPEKRE 34
          YYEIL V +                               K+F        VLSD  KRE
Sbjct: 4  YYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKRE 63

Query: 35 IYDQYGEDALKEGMGGGGGAHDPFDIFQSFFGGSP 69
          IYD+YG + L     G   A               
Sbjct: 64 IYDRYGREGLTGTGTGPSRAEAGSGGPGLEHHHHH 98

>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae} Length = 92

 Score = 59.3 bits (144), Expect = 2e-11
 Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 35/80 (43%)

Query: 10 DNTKYYEILGVSK---------------------------KRF--------VLSDPEKRE 34
            TK Y++LGVS                            ++F        +L+DP+KRE
Sbjct: 6  KETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTEKFKEISEAFEILNDPQKRE 65

Query: 35 IYDQYGEDALKEGMGGGGGA 54
          IYDQYG +A + G    G  
Sbjct: 66 IYDQYGLEAARSGGPSFGPG 85

>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A Length = 103

 Score = 59.2 bits (144), Expect = 2e-11
 Identities = 35/100 (35%), Positives = 40/100 (40%), Gaps = 42/100 (42%)

Query: 14  YYEILGVSK------------------------------KRF--------VLSDPEKREI 35
           YYEILGVSK                               +F        VL+D +KR  
Sbjct: 5   YYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAA 64

Query: 36  YDQYGEDALKEGMGGGGG---AHDPFDIFQSFFGGSPFGG 72
           YDQYG  A ++G  GGGG     D  DIF   F G  FGG
Sbjct: 65  YDQYGHAAFEQGGMGGGGFGGGADFSDIFGDVF-GDIFGG 103

>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus} Length = 109

 Score = 58.6 bits (142), Expect = 4e-11
 Identities = 19/97 (19%), Positives = 28/97 (28%), Gaps = 44/97 (45%)

Query: 14  YYEILGVSK------------------------------KRF--------VLSDPEKREI 35
            Y +LG+ K                               +F        +L+D  KR I
Sbjct: 19  LYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNI 78

Query: 36  YDQYGEDALKEGMGGGGGAHDPFDIFQSFFGGSPFGG 72
           YD+YG   L      G       +   ++F   P  G
Sbjct: 79  YDKYGSLGLYVAEQFGE------ENVNTYFVSGPSSG 109

>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 92

 Score = 56.2 bits (136), Expect = 2e-10
 Identities = 21/81 (25%), Positives = 29/81 (35%), Gaps = 39/81 (48%)

Query: 14 YYEILGVSK-------------------------------KRF--------VLSDPEKRE 34
          YYE+LGV                                 K+F        VLSD +KR 
Sbjct: 11 YYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRS 70

Query: 35 IYDQYGEDALKEGMGGGGGAH 55
          +YD+ G D+ + G G  G + 
Sbjct: 71 LYDRAGCDSWRAGGGASGPSS 91

>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 112

 Score = 54.4 bits (131), Expect = 1e-09
 Identities = 13/98 (13%), Positives = 23/98 (23%), Gaps = 38/98 (38%)

Query: 7   KKSDNTKYYEILGVSK------------------------------KRF--------VLS 28
           +  D   YY +LG  +                              + F        +L+
Sbjct: 15  RSEDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILT 74

Query: 29  DPEKREIYDQYGEDALKEGMGGGGGAHDPFDIFQSFFG 66
           + E R  YD +    +          +D         G
Sbjct: 75  NEESRARYDHWRRSQMSMPFQQWEALNDSVKTSGPSSG 112

>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88

 Score = 50.4 bits (121), Expect = 2e-08
 Identities = 19/79 (24%), Positives = 24/79 (30%), Gaps = 37/79 (46%)

Query: 14 YYEILGVSK-----------------------------KRF--------VLSDPEKREIY 36
          YY+ILGV K                              +F         LSD  +R+ Y
Sbjct: 9  YYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEY 68

Query: 37 DQYGEDALKEGMGGGGGAH 55
          D  G  A   G G  G + 
Sbjct: 69 DTLGHSAFTSGKGQSGPSS 87

>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 77

 Score = 49.1 bits (118), Expect = 4e-08
 Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 37/71 (52%)

Query: 14 YYEILGVSK-----------------------------KRF--------VLSDPEKREIY 36
          YY+ LG+++                             ++F        VLSDP KREI+
Sbjct: 5  YYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIF 64

Query: 37 DQYGEDALKEG 47
          D+YGE+ LK  
Sbjct: 65 DRYGEEGLKGS 75

>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A Length = 73

 Score = 47.6 bits (114), Expect = 1e-07
 Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 35/66 (53%)

Query: 12 TKYYEILGVSK---------------------------KRF--------VLSDPEKREIY 36
          T YY++LGV                             ++F        VLSD +KR+IY
Sbjct: 8  TGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDGAEQFKQISQAYEVLSDEKKRQIY 67

Query: 37 DQYGED 42
          DQ GE+
Sbjct: 68 DQGGEE 73

>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens} Length = 155

 Score = 48.3 bits (115), Expect = 4e-07
 Identities = 18/156 (11%), Positives = 35/156 (22%), Gaps = 63/156 (40%)

Query: 5   APKKSDNTKYYEILGVSK------------------------------------KRF--- 25
           A ++     +Y ILG                                       ++F   
Sbjct: 3   AVEQMPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEI 62

Query: 26  -----VLSDPEKREIYDQYGEDALKEGMGGGGGAHDPFDIFQSFFGGSPFGGGSSRGRRQ 80
                +L + E +  YD    +     +G         ++  +        G  S     
Sbjct: 63  DQAWKILGNEETKREYDLQRCEDDLRNVGPVDAQVYLEEMSWNE-------GDHSFYLSC 115

Query: 81  RRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKC 116
           R G              Y+ +  +      + C  C
Sbjct: 116 RCG------------GKYSVSKDEAEEVSLISCDTC 139

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1 Length = 114

 Score = 47.5 bits (113), Expect = 4e-07
 Identities = 10/101 (9%), Positives = 27/101 (26%), Gaps = 39/101 (38%)

Query: 8   KSDNTKYYEILGVS----------KKRF--------------------------VLSDPE 31
           + ++ +  ++LG+           +K +                           + D  
Sbjct: 4   REESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGV 63

Query: 32  KREIYDQYGEDALKEGMGGGGGAHDPFD-IFQSFFGGSPFG 71
           K      +G       +   G   D ++  + +F   + F 
Sbjct: 64  KYAHQPDFGGFWDATEIPTYG--TDEWEQWWNAFNEENLFC 102

>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 82

 Score = 46.1 bits (110), Expect = 5e-07
 Identities = 18/71 (25%), Positives = 24/71 (33%), Gaps = 39/71 (54%)

Query: 14 YYEILGVSK-------------------------------KRF--------VLSDPEKRE 34
          YYE+L V +                               +RF        VLSD +KR+
Sbjct: 11 YYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRD 70

Query: 35 IYDQYGEDALK 45
          IYD+YG     
Sbjct: 71 IYDRYGSGPSS 81

>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp} Length = 109

 Score = 46.8 bits (112), Expect = 5e-07
 Identities = 19/97 (19%), Positives = 35/97 (36%), Gaps = 12/97 (12%)

Query: 227 HPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGR-QLLIK--SQPGEVVKPDQFKAIN 283
           HP F   G +L +   L+  EA  G +  +  L     L +   SQ G+ ++      I 
Sbjct: 4   HPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLR------IK 57

Query: 284 DEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLE 320
            +G+         G L+    +  P        ++ +
Sbjct: 58  GKGLV---SKTHTGDLFAVIKIVMPTKPDEKARELWQ 91

>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C Length = 174

 Score = 48.4 bits (115), Expect = 6e-07
 Identities = 7/94 (7%), Positives = 21/94 (22%), Gaps = 36/94 (38%)

Query: 4  RAPKKSDNTKYYEILGVS----------KKRF--------------------------VL 27
          +   + ++ +  ++LG+           +K +                           +
Sbjct: 3  KVLNREESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKM 62

Query: 28 SDPEKREIYDQYGEDALKEGMGGGGGAHDPFDIF 61
           D  K      +G       +           I+
Sbjct: 63 EDGVKYAHQPDFGGFWDATEVFASSLNPGVDAIY 96

>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 99

 Score = 46.3 bits (110), Expect = 6e-07
 Identities = 14/81 (17%), Positives = 19/81 (23%), Gaps = 38/81 (46%)

Query: 12 TKYYEILGVSK------------------------------KRF--------VLSDPEKR 33
          T  Y++LGV                                +RF        VL     R
Sbjct: 17 TALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLR 76

Query: 34 EIYDQYGEDALKEGMGGGGGA 54
            YD+           G G +
Sbjct: 77 RKYDRGLLSDEDLRGPGSGPS 97

>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus} Length = 88

 Score = 44.3 bits (105), Expect = 3e-06
 Identities = 16/69 (23%), Positives = 20/69 (28%), Gaps = 37/69 (53%)

Query: 14 YYEILGVSK-----------------------------KRF--------VLSDPEKREIY 36
           Y +LGVS+                              RF        +LS+ EKR  Y
Sbjct: 19 PYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTNY 78

Query: 37 DQYGEDALK 45
          D YG     
Sbjct: 79 DHYGSGPSS 87

>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 78

 Score = 42.6 bits (101), Expect = 8e-06
 Identities = 20/69 (28%), Positives = 25/69 (36%), Gaps = 37/69 (53%)

Query: 14 YYEILGVSK-----------------------------KRF--------VLSDPEKREIY 36
          YYEILGVS+                             + F        VLS+PEKR+ Y
Sbjct: 9  YYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQY 68

Query: 37 DQYGEDALK 45
          DQ+G     
Sbjct: 69 DQFGSGPSS 77

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.8 bits (105), Expect = 4e-05
 Identities = 54/447 (12%), Positives = 111/447 (24%), Gaps = 181/447 (40%)

Query: 4   RAPKKSDNTKYYEILGVSKKRFVLSDPEKREIYDQYGEDALKE----------GMGGGG- 52
           R    +DN  +        K  V       ++       AL E          G+ G G 
Sbjct: 116 RDRLYNDNQVF-------AKYNVSRLQPYLKL-----RQALLELRPAKNVLIDGVLGSGK 163

Query: 53  ------GAHD-------PFDIFQSFFGGSPFGGGSSRGRRQRRGEDVIHPLKVSLEDLYN 99
                             F IF                      E V+  L+        
Sbjct: 164 TWVALDVCLSYKVQCKMDFKIFWLNLK------------NCNSPETVLEMLQ-------- 203

Query: 100 GTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLGPSMIQQMQHP---- 155
                  L   +           S   ++        ++  +R L    ++   +     
Sbjct: 204 ------KLLYQIDPNWTSRSDHSSNIKLRI-----HSIQAELRRL----LKSKPYENCLL 248

Query: 156 -----CNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEA 210
                 N      +  N  +    CK            +++          T      + 
Sbjct: 249 VLLNVQNA-----KAWNAFN--LSCK------------ILL---------TT----RFKQ 276

Query: 211 -PDTVTGDIVFVLQQKEHPK-F-KRKGDDLFV------EHTLSLTEALCGFQFVITHLDG 261
             D ++      +    H       +   L +         L   E L      ++    
Sbjct: 277 VTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR-EVLTTNPRRLS---- 331

Query: 262 RQLLIKSQPGEVVKP-----DQFKAINDEGM------------PMYQRPFMRGKLYIHFT 304
              +I     E ++      D +K +N + +            P   R     K++   +
Sbjct: 332 ---II----AESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYR-----KMFDRLS 379

Query: 305 VDFPESLS-PDQCKMLETV---LPPRTSVQLTD-------MELDECEET-TLHDVNIEEE 352
           V FP S   P    +L  +   +     + + +       +E    E T ++  + +E +
Sbjct: 380 V-FPPSAHIPTI--LLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELK 436

Query: 353 MRRKQQAA-----------QEAYDEDD 368
           ++ + + A            + +D DD
Sbjct: 437 VKLENEYALHRSIVDHYNIPKTFDSDD 463

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 4e-04
 Identities = 23/173 (13%), Positives = 62/173 (35%), Gaps = 32/173 (18%)

Query: 212 DTVTG-------DIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQL 264
           D  TG       DI+ V +      F     +   +    + ++      +++  +   +
Sbjct: 8   DFETGEHQYQYKDILSVFE----DAFVD---NFDCKDVQDMPKS------ILSKEEIDHI 54

Query: 265 LIKSQPGEVVKPDQ-FKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVL 323
           ++      V    + F  +  +   M Q+ F+   L     +++   +SP + +  +  +
Sbjct: 55  IM--SKDAVSGTLRLFWTLLSKQEEMVQK-FVEEVL----RINYKFLMSPIKTEQRQPSM 107

Query: 324 PPRTSVQLTDMELDECEETTLHDVNIEEEMRRKQQAAQEAYDED----DDMQG 372
             R  ++  D   ++ +    ++V+  +   + +QA  E         D + G
Sbjct: 108 MTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLG 160

>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79

 Score = 40.3 bits (95), Expect = 6e-05
 Identities = 17/68 (25%), Positives = 22/68 (32%), Gaps = 38/68 (55%)

Query: 14 YYEILGVSK------------------------------KRF--------VLSDPEKREI 35
          YY+ILGV +                              ++F        VLSD  KR+ 
Sbjct: 9  YYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQ 68

Query: 36 YDQYGEDA 43
          YD YG   
Sbjct: 69 YDAYGSGP 76

>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans} Length = 109

 Score = 40.5 bits (95), Expect = 9e-05
 Identities = 11/72 (15%), Positives = 18/72 (25%), Gaps = 42/72 (58%)

Query: 14 YYEILGVSK----------------------------------KRF--------VLSDPE 31
           Y++L V++                                  +RF         L D E
Sbjct: 17 CYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDE 76

Query: 32 KREIYDQYGEDA 43
           +  YD Y +  
Sbjct: 77 AKTNYDYYLDHP 88

>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus} Length = 780

 Score = 42.8 bits (100), Expect = 1e-04
 Identities = 28/165 (16%), Positives = 43/165 (26%), Gaps = 53/165 (32%)

Query: 14  YYEILGVSK------------------------------KRF--------VLSDPEKREI 35
           +Y +LGVSK                                F        VL D + R+ 
Sbjct: 23  FYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKK 82

Query: 36  YDQYGEDALKEGMGGGGGAHDPFDIFQSFFGGSPFGGGSSRGRRQ--------------R 81
           YD+YGE  L++  GG   +   +      +   P      R                   
Sbjct: 83  YDKYGEKGLEDNQGGQYESWSYYRYDFGIYDDDPEIITLERREFDAAVNSGELWFVNFYS 142

Query: 82  RGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGAS 126
            G    H L  +  +        L +   V C   +      G +
Sbjct: 143 PGSSHSHDLAPTWREFAKEVDGLLRIGA-VNCGDDRMLCRMKGVN 186

>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1 Length = 94

 Score = 37.8 bits (88), Expect = 6e-04
 Identities = 10/83 (12%), Positives = 20/83 (24%), Gaps = 44/83 (53%)

Query: 5  APKKSDNTKYYEILGVSK------------------------------------KRF--- 25
          A +++    +Y ILG                                       ++F   
Sbjct: 9  ALEQTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEI 68

Query: 26 -----VLSDPEKREIYDQYGEDA 43
               +L + E ++ YD      
Sbjct: 69 DQAWKILGNEETKKKYDLQRSGP 91

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	382
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	100.0
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	100.0
3agx_A	181	DNAJ homolog subfamily B member 1; chaperone; 1.85	100.0
2q2g_A	180	HSP40 protein, heat shock 40 kDa protein, putative	100.0
1c3g_A	170	Heat shock protein 40; beta sheets, short helices,	100.0
1xao_A	121	YDJ1, mitochondrial protein import protein MAS5; b	99.96
3i38_A	109	Putative chaperone DNAJ; structural genomics, prot	99.93
2ctt_A	104	DNAJ homolog subfamily A member 3; ZING finger, be	99.84
1exk_A	79	DNAJ protein; extended beta-hairpin, CXXCXGXG, zin	99.49
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	99.21
1bq0_A	103	DNAJ, HSP40; chaperone, heat shock, protein foldin	99.04
3i38_A	109	Putative chaperone DNAJ; structural genomics, prot	98.84
2o37_A	92	Protein SIS1; HSP40, J-domain, cochaperone, APC900	98.78
2och_A	73	Hypothetical protein DNJ-12; HSP40, J-domain, chap	98.72
1hdj_A	77	Human HSP40, HDJ-1; molecular chaperone; NMR {Homo	98.66
1xao_A	121	YDJ1, mitochondrial protein import protein MAS5; b	98.65
2ctr_A	88	DNAJ homolog subfamily B member 9; J-domain, chape	98.52
2ej7_A	82	HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati	98.5
1c3g_A	170	Heat shock protein 40; beta sheets, short helices,	98.46
2q2g_A	180	HSP40 protein, heat shock 40 kDa protein, putative	98.44
2dmx_A	92	DNAJ homolog subfamily B member 8; DNAJ J domain,	98.43
2ctp_A	78	DNAJ homolog subfamily B member 12; J-domain, chap	98.4
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	98.38
2dn9_A	79	DNAJ homolog subfamily A member 3; J-domain, TID1,	98.38
2ctq_A	112	DNAJ homolog subfamily C member 12; J-domain, chap	98.37
3agx_A	181	DNAJ homolog subfamily B member 1; chaperone; 1.85	98.35
2ctw_A	109	DNAJ homolog subfamily C member 5; J-domain, chape	98.33
2lgw_A	99	DNAJ homolog subfamily B member 2; J domain, HSJ1A	98.33
2yua_A	99	Williams-beuren syndrome chromosome region 18 prot	98.3
3apq_A	210	DNAJ homolog subfamily C member 10; thioredoxin fo	98.29
2cug_A	88	Mkiaa0962 protein; DNAJ-like domain, structural ge	98.28
1wjz_A	94	1700030A21RIK protein; J-domain, DNAJ like protein	98.07
3apo_A	780	DNAJ homolog subfamily C member 10; PDI family, th	97.96
2ctt_A	104	DNAJ homolog subfamily A member 3; ZING finger, be	97.9
2pf4_E	174	Small T antigen; PP2A, SV40, DNAJ, aalpha subunit,	97.88
1exk_A	79	DNAJ protein; extended beta-hairpin, CXXCXGXG, zin	97.86
2qsa_A	109	DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s	97.81
2l6l_A	155	DNAJ homolog subfamily C member 24; DPH4, Zn-CSL,	97.8
3lcz_A	53	YCZA, inhibitor of trap, regulated by T-box (Trp)	97.77
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	97.63
3pmq_A	669	Decaheme cytochrome C MTRF; greek KEY, C type cyto	97.6
3hho_A	174	CO-chaperone protein HSCB homolog; structural geno	97.39
3bvo_A	207	CO-chaperone protein HSCB, mitochondrial precurso;	97.17
1fpo_A	171	HSC20, chaperone protein HSCB; molecular chaperone	97.13
3lcz_A	53	YCZA, inhibitor of trap, regulated by T-box (Trp)	96.87
2bx9_A	53	Anti-trap, AT, tryptophan RNA-binding attenuator p	96.85
2bx9_A	53	Anti-trap, AT, tryptophan RNA-binding attenuator p	96.82
2ys8_A	90	RAB-related GTP-binding protein RABJ; DNAJ domain,	96.58
1faf_A	79	Large T antigen; J domain, HPD motif, anti-paralle	96.58
3uo3_A	181	J-type CO-chaperone JAC1, mitochondrial; structura	96.2
2guz_A	71	Mitochondrial import inner membrane translocase su	93.45
1iur_A	88	KIAA0730 protein; DNAJ like domain, riken structur	91.7

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1

Probab=100.00  E-value=1.6e-65  Score=483.19  Aligned_cols=240  Identities=45%  Similarity=0.868  Sum_probs=220.3

Q ss_pred             cccCCceeEeccccccccccCcceeEEeeceeeeCCCCCCCCccCCCcccCCCCCcccEEEEEEecCCccceeecccCCC
Q 016833           79 RQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNE  158 (382)
Q Consensus        79 ~~~kg~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~  158 (382)
                      +++++.|+.++|.|||||+|+|+++++.+++.+.|+.|+|+|++.++..+|+.|+|+|+++..+++|| |+++++.+|+.
T Consensus         7 ~~~~g~d~~~~l~vslee~~~G~~k~i~~~r~~~C~~C~G~G~~~g~~~~C~~C~G~G~~~~~~~~g~-~~~~~~~~C~~   85 (248)
T 1nlt_A            7 GPQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGP-MIQRFQTECDV   85 (248)
T ss_dssp             -CCBCCCEEEEEEECTTHHHHCEEEEEEEEEEEECTTTTTCSBSTTTCCCCTTSSSSSCEEEEEESSS-EEEEEECSCTT
T ss_pred             CCCCCCCEEEEEEecHHHhcCCceEEEEeeEEEeCCCCcCccCCCCCCccCCCCCCCcEEEEEEecCc-eEEEEEEcCCC
Confidence            45679999999999999999999999999999999999999999888789999999999999999999 99999999999


Q ss_pred             CcceeEEecCCCCCCCCCCceEEEeceEEEEEeccCCCCCCEEEeCCCCCCCCCCCCccEEEEEEEecCCccccccccce
Q 016833          159 CKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLF  238 (382)
Q Consensus       159 C~G~G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G~~~g~~i~~~geG~~~~g~~~GDl~v~i~~k~h~~F~R~g~DL~  238 (382)
                      |+|+|+++..+++|+.|+|.|++.+.++|+|+|||||++|++|+|+|+|++.+++.+|||||+|++++|+.|+|+|+|||
T Consensus        86 C~G~G~~i~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~g~~GDl~v~i~v~~h~~F~R~G~DL~  165 (248)
T 1nlt_A           86 CHGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLV  165 (248)
T ss_dssp             CSSSSSCCCTTSBCSSSTTSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCTTCBCCCEEEEEEECCCSSCEEETTEEE
T ss_pred             CCCcCEEeccCCCCcccCCCceEeeeEEEEEEECCCccCCCEEEEeeeecCCCCCCcceEEEEEEEecCccceeeCCEEE
Confidence            99999999878999999999999999999999999999999999999999988889999999999999999999999999


Q ss_pred             eeeccCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCC--CCHHHH
Q 016833          239 VEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPES--LSPDQC  316 (382)
Q Consensus       239 ~~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~i~g~GmP~~~~~~~~GdL~i~~~V~~P~~--l~~~~~  316 (382)
                      ++++|||+|||+|+++.|+||||+.+.|++|||++++||++++|+|+|||..+++ .+|||||+|+|+||++  ||++|+
T Consensus       166 ~~~~Isl~eAllG~~i~v~tldG~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~-~~GDL~V~~~V~~P~~~~Ls~~q~  244 (248)
T 1nlt_A          166 YEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKDPENHFTSEENL  244 (248)
T ss_dssp             EEEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSC-SBCCEEEEEEEECCC---------
T ss_pred             EEEEeCHHHHhcCCEEEEeCCCCCEEEEEeCCCCeeCCCeEEEEcCCCCccCCCC-CcCCEEEEEEEECCCCCCCCHHHH
Confidence            9999999999999999999999988999999999999999999999999987555 6899999999999999  999999


Q ss_pred             HHHH
Q 016833          317 KMLE  320 (382)
Q Consensus       317 ~~l~  320 (382)
                      ++|+
T Consensus       245 ~~l~  248 (248)
T 1nlt_A          245 KKLE  248 (248)
T ss_dssp             ----
T ss_pred             HhhC
Confidence            8875

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A

Probab=100.00  E-value=1.8e-55  Score=429.66  Aligned_cols=247  Identities=25%  Similarity=0.382  Sum_probs=158.6

Q ss_pred             CCCCcchhhhcCCCCC------------------------------------ce-eccCccccccccccchhhhhCCC--
Q 016833            8 KSDNTKYYEILGVSKK------------------------------------RF-VLSDPEKREIYDQYGEDALKEGM--   48 (382)
Q Consensus         8 ~~~~~~~Y~iLgv~~~------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g~--   48 (382)
                      .+..+|||+||||+++                                    || |||||+||+.||+|+..+...++  
T Consensus        24 ~m~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~~~~~  103 (329)
T 3lz8_A           24 AMELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDPGFGR  103 (329)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhhhhcccchhhccccCCCccc
Confidence            3456899999999998                                    99 99999999999999544321111  


Q ss_pred             --C---CCCCCCCchhhhhcccCCCCCCCCCCCCccccCCceeEeccccccccccCcceeEEeeceeeeCCCCCCCCccC
Q 016833           49 --G---GGGGAHDPFDIFQSFFGGSPFGGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKS  123 (382)
Q Consensus        49 --~---~~~~~~~~~d~F~~~Fggg~f~g~~~~~~~~~kg~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~  123 (382)
                        +   ++.++.+++|||++|||++++  + ++.+.++++.|+.++|.|||+|+|+|+++++.+++.+.|    |.    
T Consensus       104 ~~~~~~~~f~~~~f~diF~~~Fg~~g~--~-~~~~~~~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~----g~----  172 (329)
T 3lz8_A          104 QRQTHEQSYSQQDFDDIFSSMFGQQAH--Q-RRRQHAARGHDLEIEVAVFLEETLAEQTRTISYNLPVYN----VF----  172 (329)
T ss_dssp             ------------------------------------CCCCCCEEEEECCCTTGGGSCEEEEEEEEEEECC----SC----
T ss_pred             ccccccCCcCCCchhhhhHhhhcCcCC--C-CCCCCcCCCCCEEEEEecchhhhhhccceEEEEEEEeec----CC----
Confidence              0   111123578999999985321  1 112335689999999999999999999999999886532    11    


Q ss_pred             CCcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCCCceEEEeceEEEEEeccCCCCCCEEEe
Q 016833          124 GASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITF  203 (382)
Q Consensus       124 ~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G~~~g~~i~~  203 (382)
                                  |.+                                         .+...++++|+||||+++|++|+|
T Consensus       173 ------------G~v-----------------------------------------~~~~~~~l~V~IP~Gv~~G~~Irl  199 (329)
T 3lz8_A          173 ------------GMI-----------------------------------------ESETPKTLNVKIPAGVVDGQRIRL  199 (329)
T ss_dssp             ------------C-C-----------------------------------------CEEEEEEEEEEECTTCCTTCEEEE
T ss_pred             ------------eEE-----------------------------------------EEecceEEEEeCCCCCCCCCEEEE
Confidence                        110                                         123356899999999999999999


Q ss_pred             CCCCCCCC-CCCCccEEEEEEEecCCccccccccceeeeccCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEEEE
Q 016833          204 PGEADEAP-DTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAI  282 (382)
Q Consensus       204 ~geG~~~~-g~~~GDl~v~i~~k~h~~F~R~g~DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~i  282 (382)
                      +|+|++.+ ++.+|||||+|++++|+.|+|+|+||+++++|+|+|||||+++.|+||||+ +.|+||+|  ++||++++|
T Consensus       200 ~G~G~~g~~gg~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~VptLdG~-v~l~ip~g--t~~g~~~rl  276 (329)
T 3lz8_A          200 KGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKES-ILLTVPPG--SQAGQRLRI  276 (329)
T ss_dssp             SSCSCCC---CCCCCEEEEECCCCCSSCEEETTEEEEEEEECHHHHHHCEEEEECCSSSC-EEEEECTT--CCTTCEEEE
T ss_pred             cccccCCCCCCCCCcEEEEEEEecCCccEEcCCcEEEEEECCHHHHcCCCeEEEECCCCC-EEEEECCC--CCCCCEEEE
Confidence            99999864 678999999999999999999999999999999999999999999999998 69999999  699999999


Q ss_pred             cCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHhCC
Q 016833          283 NDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP  324 (382)
Q Consensus       283 ~g~GmP~~~~~~~~GdL~i~~~V~~P~~l~~~~~~~l~~~lp  324 (382)
                      +|+|||..   ..+|||||+|+|+||++||++|+++|+++..
T Consensus       277 ~G~GmP~~---~~rGDL~v~~~V~~P~~l~~~q~~~l~~~~~  315 (329)
T 3lz8_A          277 KGKGLVSK---THTGDLFAVIKIVMPTKPDEKARELWQQLAA  315 (329)
T ss_dssp             TTCSCBCS---SCBCCEEEEEEECCCSSCCHHHHHHHHHHHH
T ss_pred             cCCCCCCC---CCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence            99999975   3699999999999999999999999999875

>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A

Probab=100.00  E-value=4.4e-48  Score=347.96  Aligned_cols=180  Identities=39%  Similarity=0.681  Sum_probs=160.9

Q ss_pred             CceeEeccccccccccCcceeEEeeceeeeCCCCCCCCccCCCcccCCCCCcccEEEEEEecCCccceeecccCCCCcce
Q 016833           83 GEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGT  162 (382)
Q Consensus        83 g~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~  162 (382)
                      ++|+.++|.|||||+|+|+++++.+++                                                     
T Consensus         2 ~~d~~~~l~islee~~~G~~k~i~i~~-----------------------------------------------------   28 (181)
T 3agx_A            2 DPPVTHDLRVSLEEIYSGCTKKMKISH-----------------------------------------------------   28 (181)
T ss_dssp             ----CEEEEECHHHHHHCEEEEEEEEE-----------------------------------------------------
T ss_pred             CCCEEEEEEEEHHHhcCCcEEEEEEec-----------------------------------------------------
Confidence            468899999999999999999987653                                                     


Q ss_pred             eEEecCCCCCCCCCCceEEEeceEEEEEeccCCCCCCEEEeCCCCCCCCCCCCccEEEEEEEecCCccccccccceeeec
Q 016833          163 GETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHT  242 (382)
Q Consensus       163 G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G~~~g~~i~~~geG~~~~g~~~GDl~v~i~~k~h~~F~R~g~DL~~~~~  242 (382)
                              .|..|+|++++.+.++++|+|||||++|++|+|+|+|++.+++.+|||||+|++++|+.|+|+|+||+++++
T Consensus        29 --------~c~~c~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~~g~~GDl~v~i~~~~h~~F~R~G~DL~~~~~  100 (181)
T 3agx_A           29 --------KRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPAR  100 (181)
T ss_dssp             --------EEECTTSSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCSSSCCCCEEEEEEECCCSSCEEETTEEEEEEE
T ss_pred             --------ccCCCCCceEEEEeEEEEEEECCCccCCcEEEEeeccccCCCCCcccEEEEEEEeccccceeeCCcEEEEEE
Confidence                    133344444556789999999999999999999999999888999999999999999999999999999999


Q ss_pred             cCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHh
Q 016833          243 LSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETV  322 (382)
Q Consensus       243 I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~i~g~GmP~~~~~~~~GdL~i~~~V~~P~~l~~~~~~~l~~~  322 (382)
                      |||+|||+|+++.|+||||+.+.|++|++  ++||++++|+|+|||..+++..+|||||+|+|.||++||++|+++|+++
T Consensus       101 Isl~eAllG~~i~v~tldG~~~~i~i~~~--t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~ls~~q~~~l~~~  178 (181)
T 3agx_A          101 ISLREALCGCTVNVPTLDGRTIPVVFKDV--IRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQV  178 (181)
T ss_dssp             EEHHHHHHCEEEEEECTTSCEEEEEECSC--CCTTCEEEETTCSCBCSSSTTSBCCEEEEEEEECCSCCCHHHHHHHHHH
T ss_pred             cCHHHHhCCCEEEeECCCCCEEEEECCCc--cCCCcEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHh
Confidence            99999999999999999999899999987  7999999999999998765667999999999999999999999999999


Q ss_pred             CCC
Q 016833          323 LPP  325 (382)
Q Consensus       323 lp~  325 (382)
                      ||+
T Consensus       179 ~~~  181 (181)
T 3agx_A          179 LPI  181 (181)
T ss_dssp             SCC
T ss_pred             ccC
Confidence            963

>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=2.3e-46  Score=336.53  Aligned_cols=178  Identities=37%  Similarity=0.659  Sum_probs=164.7

Q ss_pred             CCceeEeccccccccccCcceeEEeeceeeeCCCCCCCCccCCCcccCCCCCcccEEEEEEecCCccceeecccCCCCcc
Q 016833           82 RGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKG  161 (382)
Q Consensus        82 kg~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G  161 (382)
                      ++.|+.++|.|||||+|+|+++++.+++.+.|+.                                              
T Consensus         2 ~g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~----------------------------------------------   35 (180)
T 2q2g_A            2 APRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEH----------------------------------------------   35 (180)
T ss_dssp             --CEEEEEEEECHHHHHHCEEEEEEEEEEEEETT----------------------------------------------
T ss_pred             CCCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCC----------------------------------------------
Confidence            3789999999999999999999999999888731                                              


Q ss_pred             eeEEecCCCCCCCCCCceEEEeceEEEEEeccCCCCCCEEEeCCCCCC-CCCCCCccEEEEEEEecCCccccccccceee
Q 016833          162 TGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADE-APDTVTGDIVFVLQQKEHPKFKRKGDDLFVE  240 (382)
Q Consensus       162 ~G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G~~~g~~i~~~geG~~-~~g~~~GDl~v~i~~k~h~~F~R~g~DL~~~  240 (382)
                                       +++.+.++++|+|||||++|++|+|+|+|++ .+++.+|||||+|++++|+.|+|+|+||+++
T Consensus        36 -----------------g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~gg~~GDl~v~i~~~~h~~F~R~G~DL~~~   98 (180)
T 2q2g_A           36 -----------------KVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLIIQTKTHPRFTRDDCHLIMK   98 (180)
T ss_dssp             -----------------EEEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTTSCCCEEEEEEEECCCSSCEEETTEEEEE
T ss_pred             -----------------ceEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCCCccccEEEEEEEEecccEEEcCCEEEEE
Confidence                             2455678999999999999999999999999 7899999999999999999999999999999


Q ss_pred             eccCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHH
Q 016833          241 HTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLE  320 (382)
Q Consensus       241 ~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~i~g~GmP~~~~~~~~GdL~i~~~V~~P~~l~~~~~~~l~  320 (382)
                      ++|||+|||+|+++.|+||||+.+.|++|++  ++||++++|+|+|||..++++.+|||||+|+|+||++||++|+++|+
T Consensus        99 ~~Isl~eAllG~~i~v~tldG~~v~i~ip~~--t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~  176 (180)
T 2q2g_A           99 VTIPLVRALTGFTCPVTTLDNRNLQIPIKEI--VNPKTRKIVPNEGMPIKNQPGQKGDLILEFDICFPKSLTPEQKKLIK  176 (180)
T ss_dssp             EEEEHHHHHHCEEEEEECTTCCEEEEEECSC--CCTTCEEEETTCSCBCSSSTTCBCCEEEEEEEECCSCCCHHHHHHHH
T ss_pred             EEcCHHHHhCCCEEEeeCCCCCEEEEECCCc--cCCCEEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHH
Confidence            9999999999999999999999899999987  89999999999999987666679999999999999999999999999


Q ss_pred             HhCC
Q 016833          321 TVLP  324 (382)
Q Consensus       321 ~~lp  324 (382)
                      ++||
T Consensus       177 ~~~p  180 (180)
T 2q2g_A          177 EALD  180 (180)
T ss_dssp             HHC-
T ss_pred             HhcC
Confidence            9985

>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A

Probab=100.00  E-value=7.3e-43  Score=311.01  Aligned_cols=169  Identities=36%  Similarity=0.582  Sum_probs=153.6

Q ss_pred             ceeEeccccccccccCcceeEEeeceeeeCCCCCCCCccCCCcccCCCCCcccEEEEEEecCCccceeecccCCCCccee
Q 016833           84 EDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTG  163 (382)
Q Consensus        84 ~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G  163 (382)
                      +|+.++|.|||||+|+|+++++++++..    +                  .                            
T Consensus         1 ~d~~~~l~islee~~~G~~k~i~~~~~~----~------------------~----------------------------   30 (170)
T 1c3g_A            1 ETVQVNLPVSLEDLFVGKKKSFKIGRKG----P------------------H----------------------------   30 (170)
T ss_dssp             CEEEEEEEECHHHHHHTCEEEEEEEEEE----T------------------T----------------------------
T ss_pred             CCEEEEEEeEHHHhhCCcEEEEEEEEec----C------------------C----------------------------
Confidence            4789999999999999999999988651    0                  0                            


Q ss_pred             EEecCCCCCCCCCCceEEEeceEEEEEeccCCCCCCEEEeCCCCCC-CCCCCCccEEEEEEEecCCccccccccceeeec
Q 016833          164 ETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADE-APDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHT  242 (382)
Q Consensus       164 ~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G~~~g~~i~~~geG~~-~~g~~~GDl~v~i~~k~h~~F~R~g~DL~~~~~  242 (382)
                                     |.+ +.++++|+|||||++|++|+|+|+|++ .+++.+|||||+|++++|+.|+|+|+||+++++
T Consensus        31 ---------------G~~-~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~gg~~GDl~v~i~v~~h~~F~R~G~DL~~~~~   94 (170)
T 1c3g_A           31 ---------------GAS-EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLP   94 (170)
T ss_dssp             ---------------TEE-EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEECCCSSEEEETTEEEEEEC
T ss_pred             ---------------CcE-EeEEEEEEeCCCccCCCEEEEeccccCCCCCCccccEEEEEEEccCCccEEeCCcEeEEEE
Confidence                           112 568899999999999999999999995 678899999999999999999999999999999


Q ss_pred             cCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHH
Q 016833          243 LSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLE  320 (382)
Q Consensus       243 I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~i~g~GmP~~~~~~~~GdL~i~~~V~~P~~l~~~~~~~l~  320 (382)
                      |||+|||+|+++.|+||||+.+.|++|++  ++||++++|+|+|||..++++.+|||||+|+|.||++||++|+++|+
T Consensus        95 Isl~eAllG~~~~v~tldG~~~~i~i~~~--t~~g~~~rl~g~G~p~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~  170 (170)
T 1c3g_A           95 LSFKESLLGFSKTIQTIDGRTLPLSRVQP--VQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQKRAID  170 (170)
T ss_dssp             CBHHHHHHCEEEEEECSSSCEEEEEESSC--CCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCSSCCTTHHHHTC
T ss_pred             cCHHHHhCCCeEEeeCCCCCEEEEECCCc--cCCCcEEEEeCCCCCcCCCCCCCCCEEEEEEEECCCCCCHHHHHhhC
Confidence            99999999999999999998889999988  79999999999999987666678999999999999999999988763

>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}

Probab=99.96  E-value=3.7e-29  Score=210.38  Aligned_cols=118  Identities=37%  Similarity=0.601  Sum_probs=101.2

Q ss_pred             ccccccccceeeeccCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECC
Q 016833          229 KFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFP  308 (382)
Q Consensus       229 ~F~R~g~DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~i~g~GmP~~~~~~~~GdL~i~~~V~~P  308 (382)
                      .|+|+|+||+++++|+|+|||+|+++.|+||||+.+.|++|||++++||++++|+|+|||..+++ .+|||||+|+|.||
T Consensus         1 ~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~-~~GDL~V~~~V~~P   79 (121)
T 1xao_A            1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKFP   79 (121)
T ss_dssp             CCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECTTSCCCTTCEEEETTCSCC-------CCCEEEEEEEECC
T ss_pred             CceEECCeEEEEEEcCHHHHhCCCEEEEecCCCCEEEEEeCCCCeeCCCcEEEECCCCCCCCCCC-CCCCEEEEEEEECC
Confidence            49999999999999999999999999999999998999999999999999999999999987555 68999999999999


Q ss_pred             CC--CCHHHHHHHHHhCCCCCCCCCccCcccccceeeeecCCh
Q 016833          309 ES--LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNI  349 (382)
Q Consensus       309 ~~--l~~~~~~~l~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~  349 (382)
                      ++  |+++|+++|+++++.+.. . .....+++|++.+.++++
T Consensus        80 ~~~~ls~~q~~~l~~l~~~~~~-~-~~~~~~~~ee~~~~~~~~  120 (121)
T 1xao_A           80 ENHFTSEENLKKLEEILPPRIV-P-AIPKKATVDECVLADFDP  120 (121)
T ss_dssp             CTTCSCHHHHHHHHHHSCCCCC-C-CCCTTSCEEEEECEECCC
T ss_pred             CCCCCCHHHHHHHHHHcccccc-c-CCCCCCCceEEEeeccCC
Confidence            99  999999999999987642 1 123446778888888875

>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}

Probab=99.93  E-value=1.5e-26  Score=190.88  Aligned_cols=95  Identities=20%  Similarity=0.332  Sum_probs=88.1

Q ss_pred             ecCCccccccccceeeeccCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEE
Q 016833          225 KEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFT  304 (382)
Q Consensus       225 k~h~~F~R~g~DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~i~g~GmP~~~~~~~~GdL~i~~~  304 (382)
                      ++|+.|+|+|+||+++++|||.|||+|+++.|+||||+ +.|++|+|  ++||++++|+|+|||.. +  .+|||||+|+
T Consensus         2 kph~~F~R~G~DL~~~~~Isl~eAl~G~~i~v~tldG~-~~v~ip~g--~~~G~~~rl~G~G~p~~-~--~~GDL~v~~~   75 (109)
T 3i38_A            2 NAHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKES-ILLTVPPG--SQAGQRLRIKGKGLVSK-T--HTGDLFAVIK   75 (109)
T ss_dssp             --CCCCEEETTEEEEEEEECHHHHHHCEEEEECCSSSC-EEEEECTT--CCTTCEEEETTCSCBCS-S--CBCCEEEEEE
T ss_pred             CCCCCeEEECCEEEEEEEcCHHHHhCCCEEEEEcCCCC-EEEeeCCC--cCcCeEEEECCccCCCC-C--CCcCEEEEEE
Confidence            68999999999999999999999999999999999995 89999999  89999999999999973 2  6999999999


Q ss_pred             EECCCCCCHHHHHHHHHhCCC
Q 016833          305 VDFPESLSPDQCKMLETVLPP  325 (382)
Q Consensus       305 V~~P~~l~~~~~~~l~~~lp~  325 (382)
                      |+||++||++|+++|++++..
T Consensus        76 V~~P~~Ls~~q~~~l~~l~~~   96 (109)
T 3i38_A           76 IVMPTKPDEKARELWQQLAAA   96 (109)
T ss_dssp             ECCCSSCCHHHHHHHHHHHHH
T ss_pred             EECCCCCCHHHHHHHHHHHhh
Confidence            999999999999999999853

>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.84  E-value=3.1e-22  Score=163.72  Aligned_cols=102  Identities=27%  Similarity=0.609  Sum_probs=90.6

Q ss_pred             CceeEeccccccccccCcceeEEeeceeeeCCCCCCCCccCCCc-ccCCCCCcccEEEEEEecCCccceeecccCCCCcc
Q 016833           83 GEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGAS-MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKG  161 (382)
Q Consensus        83 g~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~-~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G  161 (382)
                      +.|+.++|.|||||+|+|++++|.+++.+.|+.|+|+|+++++. .+|+.|+|+|++...+  |+  + +++.+|+.|+|
T Consensus         1 ~~~~~~~l~vslee~~~G~~~~i~~~~~~~C~~C~G~G~~~g~~~~~C~~C~G~G~~~~~~--G~--~-~~~~~C~~C~G   75 (104)
T 2ctt_A            1 GSSGSSGMELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGMETINT--GP--F-VMRSTCRRCGG   75 (104)
T ss_dssp             CCCCCCCCCCCCSSCCSSSCTTCCSSCCEECSSSSSSSSCTTCCCEECSSSSSSCEEEEEE--TT--E-EEEEECSSSSS
T ss_pred             CCceEEEEEEEHHHHcCCCEEEEEeeeeeECCCCcCCccCCCCCCccCCCCCCCEEEEEEe--CC--E-EEEEECCcCCC
Confidence            35788999999999999999999999999999999999998865 7999999999876543  54  3 35789999999


Q ss_pred             eeEEecCCCCCCCCCCceEEEeceEEEEEe
Q 016833          162 TGETINDKDRCPQCKGEKVIQEKKVLEVIV  191 (382)
Q Consensus       162 ~G~~~~~k~~C~~C~G~g~~~~~~~l~V~I  191 (382)
                      +|+++.  ++|+.|+|.|++.++++|+|+|
T Consensus        76 ~G~~i~--~~C~~C~G~G~v~~~k~l~V~~  103 (104)
T 2ctt_A           76 RGSIII--SPCVVCRGAGQAKQKKRSGPSS  103 (104)
T ss_dssp             SSEECS--SCCSSSSSCSEECCCCSSCCSC
T ss_pred             cceECC--CcCCCCCCeeEEEEEEEEEEEc
Confidence            999986  8999999999999999988865

>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1

Probab=99.49  E-value=1.9e-14  Score=111.36  Aligned_cols=77  Identities=30%  Similarity=0.758  Sum_probs=66.0

Q ss_pred             cceeEEeeceeeeCCCCCCCCccCCCc-ccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCCCc
Q 016833          100 GTSKKLSLSRNVICTKCKGKGSKSGAS-MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGE  178 (382)
Q Consensus       100 G~~~~i~~~r~~~C~~C~G~G~~~~~~-~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~G~  178 (382)
                      |++++|.+++.+.|+.|+|+|...... .+|+.|+|+|.++..+    |++ +++.+|+.|+|+|+++.  ++|+.|+|.
T Consensus         1 G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~----g~~-~~~~~C~~C~G~G~~~~--~~C~~C~G~   73 (79)
T 1exk_A            1 GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQ----GFF-AVQQTCPHCQGRGTLIK--DPCNKCHGH   73 (79)
T ss_dssp             CTTTSCCCCCEEECGGGTTTSBCSSSCCEECTTTTTSSEEEEEE----TTE-EEEEECTTTTTSSEECS--SBCGGGTTS
T ss_pred             CcEEEEEcccceECCCCcccccCCCccCCCCCCCcCeEEEEEEc----CCC-EEeeECcCCCCccEECC--CcCCCCCCe
Confidence            677889999999999999999887664 7999999999977533    455 46789999999999975  899999999


Q ss_pred             eEEEe
Q 016833          179 KVIQE  183 (382)
Q Consensus       179 g~~~~  183 (382)
                      |++.+
T Consensus        74 G~~~~   78 (79)
T 1exk_A           74 GRVER   78 (79)
T ss_dssp             SEEEC
T ss_pred             EEEee
Confidence            99865

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1

Probab=99.21  E-value=1.4e-11  Score=115.33  Aligned_cols=129  Identities=21%  Similarity=0.348  Sum_probs=83.0

Q ss_pred             cccCcceeEEeeceeeeCCCCCCCCccC-----C-----CcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEE
Q 016833           96 DLYNGTSKKLSLSRNVICTKCKGKGSKS-----G-----ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGET  165 (382)
Q Consensus        96 e~~~G~~~~i~~~r~~~C~~C~G~G~~~-----~-----~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~  165 (382)
                      ..|.|...+- -. ...|+.|+|+|...     +     ...+|+.|+|+|.++           ....+|+.|+|+|.+
T Consensus        42 ~~C~G~G~~~-g~-~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i-----------~~~~~C~~C~G~g~~  108 (248)
T 1nlt_A           42 KECEGRGGKK-GA-VKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDII-----------DPKDRCKSCNGKKVE  108 (248)
T ss_dssp             TTTTTCSBST-TT-CCCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCC-----------CTTSBCSSSTTSCEE
T ss_pred             CCCcCccCCC-CC-CccCCCCCCCcEEEEEEecCceEEEEEEcCCCCCCcCEEe-----------ccCCCCcccCCCceE
Confidence            5567776552 22 37899999999642     1     236899999999754           226789999999976


Q ss_pred             ecCCCC-----CCCCC------------------CceEEEe-------------------------------------c-
Q 016833          166 INDKDR-----CPQCK------------------GEKVIQE-------------------------------------K-  184 (382)
Q Consensus       166 ~~~k~~-----C~~C~------------------G~g~~~~-------------------------------------~-  184 (382)
                      ...+..     -..-.                  |.=++..                                     . 
T Consensus       109 ~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~g~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG  188 (248)
T 1nlt_A          109 NERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSG  188 (248)
T ss_dssp             EEEEEEEEEECTTCCTTCEEEETTCSCCCTTCBCCCEEEEEEECCCSSCEEETTEEEEEEEEEHHHHHHCBCCEEECSSS
T ss_pred             eeeEEEEEEECCCccCCCEEEEeeeecCCCCCCcceEEEEEEEecCccceeeCCEEEEEEEeCHHHHhcCCEEEEeCCCC
Confidence            543222     00000                  1111110                                     1 


Q ss_pred             eEEEEEeccC--CCCCCEEEeCCCCCCCCC-CCCccEEEEEEEecCCc--cccccccc
Q 016833          185 KVLEVIVEKG--MQNGQKITFPGEADEAPD-TVTGDIVFVLQQKEHPK--FKRKGDDL  237 (382)
Q Consensus       185 ~~l~V~Ip~G--~~~g~~i~~~geG~~~~g-~~~GDl~v~i~~k~h~~--F~R~g~DL  237 (382)
                      +.++|.||+|  +++|++++|+|+|.+..+ ...|||||+|++..+..  +..+...|
T Consensus       189 ~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~~~GDL~V~~~V~~P~~~~Ls~~q~~~  246 (248)
T 1nlt_A          189 DWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDPENHFTSEENLKK  246 (248)
T ss_dssp             CEEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCEEEEEEEECCC-----------
T ss_pred             CEEEEEeCCCCeeCCCeEEEEcCCCCccCCCCCcCCEEEEEEEECCCCCCCCHHHHHh
Confidence            4799999999  999999999999998543 26799999999997765  55544433

>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A

Probab=99.04  E-value=3.3e-11  Score=97.84  Aligned_cols=57  Identities=54%  Similarity=0.941  Sum_probs=34.1

Q ss_pred             CcchhhhcCCCCC-------------------------------------ce-eccCccccccccccchhhhhCCCCCCC
Q 016833           11 NTKYYEILGVSKK-------------------------------------RF-VLSDPEKREIYDQYGEDALKEGMGGGG   52 (382)
Q Consensus        11 ~~~~Y~iLgv~~~-------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g~~~~~   52 (382)
                      ..+||+||||+++                                     || ||+||.+|+.||++|++++..+.++++
T Consensus         2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~~~~~~   81 (103)
T 1bq0_A            2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGG   81 (103)
T ss_dssp             CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCSCC----
T ss_pred             CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhcccCcCCC
Confidence            5699999999998                                     99 999999999999999988875321111


Q ss_pred             ---CCCCchhhhhcccCC
Q 016833           53 ---GAHDPFDIFQSFFGG   67 (382)
Q Consensus        53 ---~~~~~~d~F~~~Fgg   67 (382)
                         ++.++.++|+.||+.
T Consensus        82 ~~~~~~~~~~~f~~~f~~   99 (103)
T 1bq0_A           82 GFGGGADFSDIFGDVFGD   99 (103)
T ss_dssp             ------------------
T ss_pred             CCCCCCCHHHHHHHHHHh
Confidence               123566788888863

>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}

Probab=98.84  E-value=2.2e-09  Score=87.99  Aligned_cols=51  Identities=25%  Similarity=0.371  Sum_probs=42.8

Q ss_pred             EEEEeccCCCCCCEEEeCCCCCCCCCCCCccEEEEEEEecCCccccccccce
Q 016833          187 LEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLF  238 (382)
Q Consensus       187 l~V~Ip~G~~~g~~i~~~geG~~~~g~~~GDl~v~i~~k~h~~F~R~g~DL~  238 (382)
                      ++|.||+|+++|++++++|+|++..+ ..|||||+|++..+..+..+...|+
T Consensus        40 ~~v~ip~g~~~G~~~rl~G~G~p~~~-~~GDL~v~~~V~~P~~Ls~~q~~~l   90 (109)
T 3i38_A           40 ILLTVPPGSQAGQRLRIKGKGLVSKT-HTGDLFAVIKIVMPTKPDEKARELW   90 (109)
T ss_dssp             EEEEECTTCCTTCEEEETTCSCBCSS-CBCCEEEEEEECCCSSCCHHHHHHH
T ss_pred             EEEeeCCCcCcCeEEEECCccCCCCC-CCcCEEEEEEEECCCCCCHHHHHHH
Confidence            67999999999999999999998744 7899999999998876665544443

>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}

Probab=98.78  E-value=9.1e-10  Score=87.43  Aligned_cols=43  Identities=51%  Similarity=0.911  Sum_probs=37.4

Q ss_pred             CCCCCCCcchhhhcCCCCC----------------------------------ce-eccCccccccccccchhhhhCC
Q 016833            5 APKKSDNTKYYEILGVSKK----------------------------------RF-VLSDPEKREIYDQYGEDALKEG   47 (382)
Q Consensus         5 ~~~~~~~~~~Y~iLgv~~~----------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g   47 (382)
                      |..|++..+||+||||+++                                  || ||+||.+|+.||++|++++..+
T Consensus         1 s~~m~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~   78 (92)
T 2o37_A            1 SNAMVKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTEKFKEISEAFEILNDPQKREIYDQYGLEAARSG   78 (92)
T ss_dssp             ---CCSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCCHHHHHHHHHHHHHHTSHHHHHHHHHHCHHHHHTT
T ss_pred             CcccccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHhhcc
Confidence            3568889999999999998                                  99 9999999999999999998753

>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A

Probab=98.72  E-value=1.1e-09  Score=83.17  Aligned_cols=38  Identities=47%  Similarity=0.814  Sum_probs=30.3

Q ss_pred             CCCCCCCcchhhhcCCCCC----------------------------------ce-eccCccccccccccchh
Q 016833            5 APKKSDNTKYYEILGVSKK----------------------------------RF-VLSDPEKREIYDQYGED   42 (382)
Q Consensus         5 ~~~~~~~~~~Y~iLgv~~~----------------------------------AY-vLsD~~KR~~YD~~G~~   42 (382)
                      +..|+...+||+||||+++                                  || ||+||.+|+.||++|++
T Consensus         1 ~~~m~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~   73 (73)
T 2och_A            1 SNAMVKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDGAEQFKQISQAYEVLSDEKKRQIYDQGGEE   73 (73)
T ss_dssp             -----CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTCHHHHHHHHHHHHHHTSHHHHHHHHHTC--
T ss_pred             CCcccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCHHHHHHHHHHHHHHHCCHHHHHHHHhcCCC
Confidence            3568889999999999998                                  99 99999999999999863

>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=98.66  E-value=2.8e-09  Score=81.63  Aligned_cols=36  Identities=53%  Similarity=1.054  Sum_probs=33.2

Q ss_pred             CcchhhhcCCCCC------------------------------------ce-eccCccccccccccchhhhhC
Q 016833           11 NTKYYEILGVSKK------------------------------------RF-VLSDPEKREIYDQYGEDALKE   46 (382)
Q Consensus        11 ~~~~Y~iLgv~~~------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~   46 (382)
                      .++||+||||+++                                    || ||+||.+|+.||++|++++.+
T Consensus         2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~   74 (77)
T 1hdj_A            2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKG   74 (77)
T ss_dssp             CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCCS
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHHccccccc
Confidence            5799999999998                                    99 999999999999999988764

>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}

Probab=98.65  E-value=2.2e-08  Score=83.50  Aligned_cols=52  Identities=15%  Similarity=0.186  Sum_probs=40.0

Q ss_pred             EEEEEeccC--CCCCCEEEeCCCCCCCCCC-CCccEEEEEEEecCCc--cccccccc
Q 016833          186 VLEVIVEKG--MQNGQKITFPGEADEAPDT-VTGDIVFVLQQKEHPK--FKRKGDDL  237 (382)
Q Consensus       186 ~l~V~Ip~G--~~~g~~i~~~geG~~~~g~-~~GDl~v~i~~k~h~~--F~R~g~DL  237 (382)
                      .++|+||+|  +++|++++++|+|.+..+. ..|||||++++..+..  +..+..+|
T Consensus        35 ~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~~~GDL~V~~~V~~P~~~~ls~~q~~~   91 (121)
T 1xao_A           35 WLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKFPENHFTSEENLKK   91 (121)
T ss_dssp             EEEEEECTTSCCCTTCEEEETTCSCC------CCCEEEEEEEECCCTTCSCHHHHHH
T ss_pred             EEEEEeCCCCeeCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHH
Confidence            478999999  9999999999999985433 6899999999998776  55554443

>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.52  E-value=1.8e-08  Score=79.13  Aligned_cols=38  Identities=42%  Similarity=0.826  Sum_probs=34.7

Q ss_pred             CCcchhhhcCCCCC------------------------------------ce-eccCccccccccccchhhhhCC
Q 016833           10 DNTKYYEILGVSKK------------------------------------RF-VLSDPEKREIYDQYGEDALKEG   47 (382)
Q Consensus        10 ~~~~~Y~iLgv~~~------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g   47 (382)
                      ...+||+||||+++                                    || ||+||.+|+.||++|+.++.++
T Consensus         5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~~   79 (88)
T 2ctr_A            5 SSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTSG   79 (88)
T ss_dssp             CCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHHTCS
T ss_pred             CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccccC
Confidence            46799999999998                                    99 9999999999999999998754

>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=1.3e-08  Score=78.80  Aligned_cols=37  Identities=46%  Similarity=0.873  Sum_probs=32.5

Q ss_pred             CCCCcchhhhcCCCCC--------------------------------------ce-eccCccccccccccchhhh
Q 016833            8 KSDNTKYYEILGVSKK--------------------------------------RF-VLSDPEKREIYDQYGEDAL   44 (382)
Q Consensus         8 ~~~~~~~Y~iLgv~~~--------------------------------------AY-vLsD~~KR~~YD~~G~~g~   44 (382)
                      .....+||+||||+++                                      || ||+||.+|+.||++|+.++
T Consensus         5 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~   80 (82)
T 2ej7_A            5 SSGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPS   80 (82)
T ss_dssp             CSSSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSC
T ss_pred             CCCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence            3456799999999998                                      99 9999999999999997654

>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A

Probab=98.46  E-value=2.8e-07  Score=81.29  Aligned_cols=72  Identities=18%  Similarity=0.126  Sum_probs=59.6

Q ss_pred             cceeeeccCHHHHhCCCEEEEEec----CC----cEEEEEeCCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEEC
Q 016833          236 DLFVEHTLSLTEALCGFQFVITHL----DG----RQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDF  307 (382)
Q Consensus       236 DL~~~~~I~l~eAl~G~~~~i~tl----dG----~~l~i~~p~g~vi~~g~~~~i~g~GmP~~~~~~~~GdL~i~~~V~~  307 (382)
                      |+.+++.|||.||+.|+++.|.--    +|    +.+.|+||||  ++.|+.++++|+|-+-. .....|||||+++|.-
T Consensus         2 d~~~~l~islee~~~G~~k~i~~~~~~~~G~~~~~~l~V~Ip~G--~~~G~~ir~~g~G~~~~-~gg~~GDl~v~i~v~~   78 (170)
T 1c3g_A            2 TVQVNLPVSLEDLFVGKKKSFKIGRKGPHGASEKTQIDIQLKPG--WKAGTKITYKNQGDYNP-QTGRRKTLQFVIQEKS   78 (170)
T ss_dssp             EEEEEEEECHHHHHHTCEEEEEEEEEETTTEEEEEEEEEECCTT--CCTTCEEEESSCSSBCS-SSSCBCEEEEEEEECC
T ss_pred             CEEEEEEeEHHHhhCCcEEEEEEEEecCCCcEEeEEEEEEeCCC--ccCCCEEEEeccccCCC-CCCccccEEEEEEEcc
Confidence            789999999999999998887632    23    7899999999  89999999999998643 2345799999999975


Q ss_pred             CCC
Q 016833          308 PES  310 (382)
Q Consensus       308 P~~  310 (382)
                      .+.
T Consensus        79 h~~   81 (170)
T 1c3g_A           79 HPN   81 (170)
T ss_dssp             CSS
T ss_pred             CCc
Confidence            444

>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}

Probab=98.44  E-value=3.1e-07  Score=81.71  Aligned_cols=74  Identities=16%  Similarity=0.095  Sum_probs=60.6

Q ss_pred             cccceeeeccCHHHHhCCCEEEEEec-----------CCcEEEEEeCCCccccCCcEEEEcCCCCC-CCCCCCCCCcEEE
Q 016833          234 GDDLFVEHTLSLTEALCGFQFVITHL-----------DGRQLLIKSQPGEVVKPDQFKAINDEGMP-MYQRPFMRGKLYI  301 (382)
Q Consensus       234 g~DL~~~~~I~l~eAl~G~~~~i~tl-----------dG~~l~i~~p~g~vi~~g~~~~i~g~GmP-~~~~~~~~GdL~i  301 (382)
                      +.|+.+++.|||.||+.|.++.|.--           ..+.+.|+||||  ++.|+.++++|+|-+ ..  ....|||||
T Consensus         3 g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~g~~~~~~~l~V~Ip~G--~~~G~~ir~~g~G~~g~~--gg~~GDl~v   78 (180)
T 2q2g_A            3 PRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEHKVRNEENIVEVEIKPG--WKDGTKLTYSGEGDQESP--GTSPGDLVL   78 (180)
T ss_dssp             -CEEEEEEEECHHHHHHCEEEEEEEEEEEEETTEEEEEEEEEEEEECTT--CCTTCEEEETTCSCCSST--TSCCCEEEE
T ss_pred             CCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCCceEEeeEEEEEEECCC--CcCCcEEEEeeccCCCCC--CCccccEEE
Confidence            67999999999999999998877632           247799999999  899999999999987 33  345799999


Q ss_pred             EEEEECCCCC
Q 016833          302 HFTVDFPESL  311 (382)
Q Consensus       302 ~~~V~~P~~l  311 (382)
                      .++|.-.+.+
T Consensus        79 ~i~~~~h~~F   88 (180)
T 2q2g_A           79 IIQTKTHPRF   88 (180)
T ss_dssp             EEEECCCSSC
T ss_pred             EEEEEecccE
Confidence            9999744443

>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.43  E-value=2.9e-08  Score=78.60  Aligned_cols=38  Identities=45%  Similarity=0.809  Sum_probs=33.7

Q ss_pred             CCCcchhhhcCCCCC--------------------------------------ce-eccCccccccccccchhhhhC
Q 016833            9 SDNTKYYEILGVSKK--------------------------------------RF-VLSDPEKREIYDQYGEDALKE   46 (382)
Q Consensus         9 ~~~~~~Y~iLgv~~~--------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~   46 (382)
                      ....+||+||||+++                                      || ||+||.+|+.||++|..++..
T Consensus         6 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~   82 (92)
T 2dmx_A            6 SGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRA   82 (92)
T ss_dssp             CCCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSCC
T ss_pred             CCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence            345699999999998                                      99 999999999999999877654

>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.40  E-value=2.6e-08  Score=76.39  Aligned_cols=35  Identities=54%  Similarity=0.993  Sum_probs=31.5

Q ss_pred             CCCcchhhhcCCCCC------------------------------------ce-eccCccccccccccchhh
Q 016833            9 SDNTKYYEILGVSKK------------------------------------RF-VLSDPEKREIYDQYGEDA   43 (382)
Q Consensus         9 ~~~~~~Y~iLgv~~~------------------------------------AY-vLsD~~KR~~YD~~G~~g   43 (382)
                      ....+||+||||+++                                    || ||+||.+|+.||++|+.+
T Consensus         4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~   75 (78)
T 2ctp_A            4 GSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP   75 (78)
T ss_dssp             SCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred             CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence            456799999999998                                    99 999999999999998754

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A

Probab=98.38  E-value=3.4e-07  Score=88.93  Aligned_cols=77  Identities=22%  Similarity=0.207  Sum_probs=59.7

Q ss_pred             ccccccceeeeccCHHHHhCCCEEEEEec------C-------CcEEEEEeCCCccccCCcEEEEcCCCCCCCCCCCCCC
Q 016833          231 KRKGDDLFVEHTLSLTEALCGFQFVITHL------D-------GRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRG  297 (382)
Q Consensus       231 ~R~g~DL~~~~~I~l~eAl~G~~~~i~tl------d-------G~~l~i~~p~g~vi~~g~~~~i~g~GmP~~~~~~~~G  297 (382)
                      .++|.||.+++.|+|.||+.|.++.|..-      .       .+.|.|+||||  +++|++++++|+|.|... ....|
T Consensus       137 ~~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~g~G~v~~~~~~~l~V~IP~G--v~~G~~Irl~G~G~~g~~-gg~~G  213 (329)
T 3lz8_A          137 AARGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGMIESETPKTLNVKIPAG--VVDGQRIRLKGQGTPGEN-GGPNG  213 (329)
T ss_dssp             CCCCCCEEEEECCCTTGGGSCEEEEEEEEEEECCSCC-CCEEEEEEEEEEECTT--CCTTCEEEESSCSCCC----CCCC
T ss_pred             cCCCCCEEEEEecchhhhhhccceEEEEEEEeecCCeEEEEecceEEEEeCCCC--CCCCCEEEEcccccCCCC-CCCCC
Confidence            35688999999999999999987665422      2       34689999999  799999999999998642 34589


Q ss_pred             cEEEEEEEECCCC
Q 016833          298 KLYIHFTVDFPES  310 (382)
Q Consensus       298 dL~i~~~V~~P~~  310 (382)
                      ||||+++|.-.+.
T Consensus       214 DL~v~I~v~~h~~  226 (329)
T 3lz8_A          214 DLWLVIHIAPHPL  226 (329)
T ss_dssp             CEEEEECCCCCSS
T ss_pred             cEEEEEEEecCCc
Confidence            9999998874443

>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.38  E-value=2.6e-08  Score=76.46  Aligned_cols=35  Identities=46%  Similarity=0.869  Sum_probs=31.3

Q ss_pred             CCCcchhhhcCCCCC-------------------------------------ce-eccCccccccccccchhh
Q 016833            9 SDNTKYYEILGVSKK-------------------------------------RF-VLSDPEKREIYDQYGEDA   43 (382)
Q Consensus         9 ~~~~~~Y~iLgv~~~-------------------------------------AY-vLsD~~KR~~YD~~G~~g   43 (382)
                      ....+||+||||+++                                     || ||+||.+|+.||++|+.+
T Consensus         4 ~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~   76 (79)
T 2dn9_A            4 GSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP   76 (79)
T ss_dssp             SCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred             CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence            346799999999998                                     99 999999999999998754

>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.37  E-value=3e-08  Score=81.49  Aligned_cols=38  Identities=26%  Similarity=0.590  Sum_probs=34.0

Q ss_pred             CCCCcchhhhcCCCCC-------------------------------------ce-eccCccccccccccchhhhh
Q 016833            8 KSDNTKYYEILGVSKK-------------------------------------RF-VLSDPEKREIYDQYGEDALK   45 (382)
Q Consensus         8 ~~~~~~~Y~iLgv~~~-------------------------------------AY-vLsD~~KR~~YD~~G~~g~~   45 (382)
                      +....+||+||||+++                                     || ||+||.+|+.||++|+.++.
T Consensus        16 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~   91 (112)
T 2ctq_A           16 SEDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQMS   91 (112)
T ss_dssp             CCCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTCS
T ss_pred             ccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhccC
Confidence            4567899999999998                                     99 99999999999999987654

>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A

Probab=98.35  E-value=1.2e-06  Score=77.93  Aligned_cols=75  Identities=16%  Similarity=0.139  Sum_probs=58.6

Q ss_pred             cccceeeeccCHHHHhCCCEEEEEec------CC-------cEEEEEeCCCccccCCcEEEEcCCCCCCCCCCCCCCcEE
Q 016833          234 GDDLFVEHTLSLTEALCGFQFVITHL------DG-------RQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLY  300 (382)
Q Consensus       234 g~DL~~~~~I~l~eAl~G~~~~i~tl------dG-------~~l~i~~p~g~vi~~g~~~~i~g~GmP~~~~~~~~GdL~  300 (382)
                      +.|+.+++.|||.||+.|.++.|.--      .|       +.+.|+||+|  ++.|+.++++|+|-+..+  ...||||
T Consensus         2 ~~d~~~~l~islee~~~G~~k~i~i~~~c~~c~G~g~~~~~~~l~V~Ip~G--~~~G~~ir~~G~G~~~~~--g~~GDl~   77 (181)
T 3agx_A            2 DPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKG--WKEGTKITFPKEGDQTSN--NIPADIV   77 (181)
T ss_dssp             ----CEEEEECHHHHHHCEEEEEEEEEEEECTTSSCEEEEEEEEEEEECTT--CCTTCEEEETTCSCCCSS--SCCCCEE
T ss_pred             CCCEEEEEEEEHHHhcCCcEEEEEEecccCCCCCceEEEEeEEEEEEECCC--ccCCcEEEEeeccccCCC--CCcccEE
Confidence            46899999999999999998776522      34       6789999999  899999999999987553  3579999


Q ss_pred             EEEEEECCCCCC
Q 016833          301 IHFTVDFPESLS  312 (382)
Q Consensus       301 i~~~V~~P~~l~  312 (382)
                      |.++|.-.+.+.
T Consensus        78 v~i~~~~h~~F~   89 (181)
T 3agx_A           78 FVLKDKPHNIFK   89 (181)
T ss_dssp             EEEEECCCSSCE
T ss_pred             EEEEEeccccce
Confidence            999998544443

>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=98.33  E-value=8.1e-08  Score=78.53  Aligned_cols=38  Identities=37%  Similarity=0.731  Sum_probs=34.5

Q ss_pred             CCCCcchhhhcCCCCC-------------------------------------ce-eccCccccccccccchhhhh
Q 016833            8 KSDNTKYYEILGVSKK-------------------------------------RF-VLSDPEKREIYDQYGEDALK   45 (382)
Q Consensus         8 ~~~~~~~Y~iLgv~~~-------------------------------------AY-vLsD~~KR~~YD~~G~~g~~   45 (382)
                      .....+||+||||+++                                     || ||+||.+|+.||++|..++.
T Consensus        13 ~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~~   88 (109)
T 2ctw_A           13 STSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGLY   88 (109)
T ss_dssp             TSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHHH
T ss_pred             CCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccccc
Confidence            4567899999999998                                     99 99999999999999998865

>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}

Probab=98.33  E-value=3e-08  Score=79.70  Aligned_cols=35  Identities=54%  Similarity=0.990  Sum_probs=29.7

Q ss_pred             cchhhhcCCCCC--------------------------------------ce-eccCccccccccccchhhhhC
Q 016833           12 TKYYEILGVSKK--------------------------------------RF-VLSDPEKREIYDQYGEDALKE   46 (382)
Q Consensus        12 ~~~Y~iLgv~~~--------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~   46 (382)
                      +|||+||||+++                                      || ||+||.+|+.||++|.+++.+
T Consensus         2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~~   75 (99)
T 2lgw_A            2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTG   75 (99)
T ss_dssp             CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC----
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence            589999999998                                      99 999999999999999887764

>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.30  E-value=1.8e-07  Score=75.00  Aligned_cols=39  Identities=28%  Similarity=0.584  Sum_probs=33.2

Q ss_pred             CCCCcchhhhcCCCCC-------------------------------------ce-eccCccccccccc--cchhhhhC
Q 016833            8 KSDNTKYYEILGVSKK-------------------------------------RF-VLSDPEKREIYDQ--YGEDALKE   46 (382)
Q Consensus         8 ~~~~~~~Y~iLgv~~~-------------------------------------AY-vLsD~~KR~~YD~--~G~~g~~~   46 (382)
                      .+...+||+||||+++                                     || ||+||.+|+.||+  ++.+.+.+
T Consensus        13 ~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~~e~~~~   91 (99)
T 2yua_A           13 SYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLLSDEDLRG   91 (99)
T ss_dssp             SSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCCCHHHHHC
T ss_pred             CCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccccccccC
Confidence            4567899999999998                                     99 9999999999998  45666653

>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}

Probab=98.29  E-value=9.4e-08  Score=86.22  Aligned_cols=52  Identities=38%  Similarity=0.821  Sum_probs=40.3

Q ss_pred             cchhhhcCCCCC-------------------------------------ce-eccCccccccccccchhhhhCCCCCCCC
Q 016833           12 TKYYEILGVSKK-------------------------------------RF-VLSDPEKREIYDQYGEDALKEGMGGGGG   53 (382)
Q Consensus        12 ~~~Y~iLgv~~~-------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g~~~~~~   53 (382)
                      .|||+||||+++                                     || ||+||.+|+.||+||+.++..+.   ++
T Consensus         2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~~~---~~   78 (210)
T 3apq_A            2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDNQ---GG   78 (210)
T ss_dssp             CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCTTC---SC
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhccccccccc---cc
Confidence            589999999998                                     99 99999999999999998876432   11


Q ss_pred             CCCchhhhhcccC
Q 016833           54 AHDPFDIFQSFFG   66 (382)
Q Consensus        54 ~~~~~d~F~~~Fg   66 (382)
                      ....+.+|...|+
T Consensus        79 ~~~~~~~~~~~fg   91 (210)
T 3apq_A           79 QYESWSYYRYDFG   91 (210)
T ss_dssp             CCCCHHHHHHSSS
T ss_pred             ccccccccccccc
Confidence            2334566666665

>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}

Probab=98.28  E-value=6.5e-08  Score=75.95  Aligned_cols=35  Identities=40%  Similarity=0.737  Sum_probs=31.6

Q ss_pred             CCCCcchhhhcCCCCC------------------------------------ce-eccCccccccccccchh
Q 016833            8 KSDNTKYYEILGVSKK------------------------------------RF-VLSDPEKREIYDQYGED   42 (382)
Q Consensus         8 ~~~~~~~Y~iLgv~~~------------------------------------AY-vLsD~~KR~~YD~~G~~   42 (382)
                      .....|||+||||+++                                    || ||+||.+|+.||++|+.
T Consensus        13 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~   84 (88)
T 2cug_A           13 SALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTNYDHYGSG   84 (88)
T ss_dssp             CSSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTC
T ss_pred             ccCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCC
Confidence            4467899999999998                                    99 99999999999999874

>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1

Probab=98.07  E-value=4.8e-07  Score=71.65  Aligned_cols=33  Identities=24%  Similarity=0.537  Sum_probs=29.7

Q ss_pred             CCCCcchhhhcCCCCC-------------------------------------------ce-eccCccccccccccc
Q 016833            8 KSDNTKYYEILGVSKK-------------------------------------------RF-VLSDPEKREIYDQYG   40 (382)
Q Consensus         8 ~~~~~~~Y~iLgv~~~-------------------------------------------AY-vLsD~~KR~~YD~~G   40 (382)
                      ++...+||+||||+++                                           || ||+||.+|+.||++.
T Consensus        12 ~~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l   88 (94)
T 1wjz_A           12 QTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQR   88 (94)
T ss_dssp             SSSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHS
T ss_pred             cCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHc
Confidence            4567899999999998                                           99 999999999999864

>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}

Probab=97.96  E-value=8.2e-07  Score=95.28  Aligned_cols=40  Identities=40%  Similarity=0.828  Sum_probs=25.7

Q ss_pred             CCCCcchhhhcCCCCC-------------------------------------ce-eccCccccccccccchhhhhCC
Q 016833            8 KSDNTKYYEILGVSKK-------------------------------------RF-VLSDPEKREIYDQYGEDALKEG   47 (382)
Q Consensus         8 ~~~~~~~Y~iLgv~~~-------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g   47 (382)
                      ...++|||+||||+++                                     || |||||++|+.||+||++++..+
T Consensus        17 ~~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~~   94 (780)
T 3apo_A           17 GRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDN   94 (780)
T ss_dssp             ------CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC--------
T ss_pred             CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcccccccC
Confidence            4567899999999998                                     99 9999999999999999988754

>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.90  E-value=4.9e-06  Score=67.18  Aligned_cols=60  Identities=28%  Similarity=0.692  Sum_probs=44.6

Q ss_pred             cccCcceeEEeeceeeeCCCCCCCCccC---C---CcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCC
Q 016833           96 DLYNGTSKKLSLSRNVICTKCKGKGSKS---G---ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDK  169 (382)
Q Consensus        96 e~~~G~~~~i~~~r~~~C~~C~G~G~~~---~---~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k  169 (382)
                      +.+.|...+ .-.....|+.|+|+|...   +   ...+|+.|+|+|.++             ..+|+.|+|.|.+...+
T Consensus        32 ~~C~G~G~~-~g~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~i-------------~~~C~~C~G~G~v~~~k   97 (104)
T 2ctt_A           32 ERCNGKGNE-PGTKVQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSII-------------ISPCVVCRGAGQAKQKK   97 (104)
T ss_dssp             SSSSSSSSC-TTCCCEECSSSSSSCEEEEEETTEEEEEECSSSSSSSEEC-------------SSCCSSSSSCSEECCCC
T ss_pred             CCCcCCccC-CCCCCccCCCCCCCEEEEEEeCCEEEEEECCcCCCcceEC-------------CCcCCCCCCeeEEEEEE
Confidence            556676543 223457899999999652   1   236899999999865             68999999999986544

>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C

Probab=97.88  E-value=6.5e-07  Score=78.96  Aligned_cols=33  Identities=15%  Similarity=0.392  Sum_probs=29.8

Q ss_pred             CCCcchhhhcCCCCC-----------------------------------ce-eccCccccccccccch
Q 016833            9 SDNTKYYEILGVSKK-----------------------------------RF-VLSDPEKREIYDQYGE   41 (382)
Q Consensus         9 ~~~~~~Y~iLgv~~~-----------------------------------AY-vLsD~~KR~~YD~~G~   41 (382)
                      ....+||+||||+++                                   || |||||.+|+.||+||.
T Consensus         8 ~~~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~~e~F~~I~~AYevLsdp~kR~~YD~~G~   76 (174)
T 2pf4_E            8 EESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGVKYAHQPDFGG   76 (174)
T ss_dssp             HHHHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---CCTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred             cccccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence            345799999999987                                   99 9999999999999985

>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1

Probab=97.86  E-value=4.7e-06  Score=63.71  Aligned_cols=57  Identities=32%  Similarity=0.778  Sum_probs=42.9

Q ss_pred             cccCcceeEEeeceeeeCCCCCCCCccCC------CcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEe
Q 016833           96 DLYNGTSKKLSLSRNVICTKCKGKGSKSG------ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETI  166 (382)
Q Consensus        96 e~~~G~~~~i~~~r~~~C~~C~G~G~~~~------~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~  166 (382)
                      ..++|.... .......|+.|+|+|....      ...+|+.|+|+|.++             ..+|+.|+|.|.+.
T Consensus        15 ~~C~G~G~~-~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~-------------~~~C~~C~G~G~~~   77 (79)
T 1exk_A           15 DVCHGSGAK-PGTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLI-------------KDPCNKCHGHGRVE   77 (79)
T ss_dssp             GGGTTTSBC-SSSCCEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEEC-------------SSBCGGGTTSSEEE
T ss_pred             CCCcccccC-CCccCCCCCCCcCeEEEEEEcCCCEEeeECcCCCCccEEC-------------CCcCCCCCCeEEEe
Confidence            556676643 2344579999999997532      125899999999864             67899999999875

>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}

Probab=97.81  E-value=1.8e-06  Score=70.39  Aligned_cols=34  Identities=26%  Similarity=0.518  Sum_probs=30.7

Q ss_pred             CCCCcchhhhcCCCCC-----------------------------------------ce-eccCccccccccccch
Q 016833            8 KSDNTKYYEILGVSKK-----------------------------------------RF-VLSDPEKREIYDQYGE   41 (382)
Q Consensus         8 ~~~~~~~Y~iLgv~~~-----------------------------------------AY-vLsD~~KR~~YD~~G~   41 (382)
                      +....+||+||||+++                                         || ||+||.+|+.||+++.
T Consensus        11 ~~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~   86 (109)
T 2qsa_A           11 YCGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD   86 (109)
T ss_dssp             TTTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred             HcCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence            4567899999999987                                         99 9999999999999875

>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}

Probab=97.80  E-value=2.7e-06  Score=73.63  Aligned_cols=33  Identities=24%  Similarity=0.482  Sum_probs=29.5

Q ss_pred             CCCcchhhhcCCCCC-------------------------------------------ce-eccCccccccccccch
Q 016833            9 SDNTKYYEILGVSKK-------------------------------------------RF-VLSDPEKREIYDQYGE   41 (382)
Q Consensus         9 ~~~~~~Y~iLgv~~~-------------------------------------------AY-vLsD~~KR~~YD~~G~   41 (382)
                      +..+|||+||||+++                                           || ||+||.+|+.||.++.
T Consensus         7 ~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~   83 (155)
T 2l6l_A            7 MPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC   83 (155)
T ss_dssp             CCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred             CCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence            456799999999998                                           99 9999999999998654

>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A

Probab=97.77  E-value=4.7e-06  Score=58.93  Aligned_cols=33  Identities=30%  Similarity=0.859  Sum_probs=28.4

Q ss_pred             eeecccCCCCcceeEEecCCCCCCCCCCceEEEec
Q 016833          150 QQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEK  184 (382)
Q Consensus       150 ~~~~~~C~~C~G~G~~~~~k~~C~~C~G~g~~~~~  184 (382)
                      |+++.+|+.|+|+|+++.  ++|+.|+|.|++.+.
T Consensus         6 qq~~~~C~~C~GsG~~i~--~~C~~C~G~G~v~~~   38 (53)
T 3lcz_A            6 DDLETTCPNCNGSGREEP--EPCPKCLGKGVILTA   38 (53)
T ss_dssp             HHHEEECTTTTTSCEETT--EECTTTTTSSEEECH
T ss_pred             CceeccCcCCcccccCCC--CcCCCCCCcEEEEEE
Confidence            567889999999999886  889999999988764

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1

Probab=97.63  E-value=5e-06  Score=68.37  Aligned_cols=31  Identities=16%  Similarity=0.386  Sum_probs=28.6

Q ss_pred             CcchhhhcCCCCC-----------------------------------ce-eccCccccccccccch
Q 016833           11 NTKYYEILGVSKK-----------------------------------RF-VLSDPEKREIYDQYGE   41 (382)
Q Consensus        11 ~~~~Y~iLgv~~~-----------------------------------AY-vLsD~~KR~~YD~~G~   41 (382)
                      ..+||+||||+++                                   || ||+||.||+.||.||.
T Consensus         7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~~e~f~~I~~AYevL~d~~~R~~~~~~~~   73 (114)
T 1gh6_A            7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGVKYAHQPDFGG   73 (114)
T ss_dssp             HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCTTTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred             hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCccHHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence            4689999999987                                   99 9999999999999874

>3pmq_A Decaheme cytochrome C MTRF; greek KEY, C type cytochrome, outer membrane, electron trans; HET: HEC; 3.20A {Shewanella oneidensis}

Probab=97.60  E-value=8.4e-07  Score=93.05  Aligned_cols=78  Identities=17%  Similarity=0.230  Sum_probs=58.4

Q ss_pred             EeccccccccccCcceeEEeeceeeeCCCCCCCCccCCC----cccCCCCCcccEEEE--------EEecCCccceeecc
Q 016833           87 IHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGA----SMKCSGCQGSGMKVS--------IRHLGPSMIQQMQH  154 (382)
Q Consensus        87 ~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~----~~~C~~C~G~G~~~~--------~~~~gpg~~~~~~~  154 (382)
                      .+.+.++|+|+..|.++++.+.+...|..|+|+|++.+.    ..+|+.|+|+.....        ++.+=.|.+-+...
T Consensus       168 ~~~l~i~feeA~~G~~k~i~v~~~~~C~tCHGsGA~~Gt~~~~~~tC~tCHGs~~~~~~~~~~~~~iH~iH~G~fP~~~~  247 (669)
T 3pmq_A          168 ITNQHYDWQSSGNMLAYTRNLVSIDTCNSCHSNLAFHGGRYNQVETCVTCHNSKKVSNAADIFPQMIHSKHLTGFPQSIS  247 (669)
T ss_dssp             SCCCEEEEECSSSSCCCCCCCCCSHHHHHHHSSCCTTTTTSCSSSCSTTTSSTTTCCCSSCSHHHHHHHHTTSSCSSCTT
T ss_pred             eEEEEEEhHHhhCCCceEEEeccCCcCCCCCCCCCcCCccCcCCccCCCCCCCcccCCccccccceeeeeeccCCCCccC
Confidence            467889999999999999999999999999999999875    378999999941100        00000012224467


Q ss_pred             cCCCCcceeE
Q 016833          155 PCNECKGTGE  164 (382)
Q Consensus       155 ~C~~C~G~G~  164 (382)
                      .|..|+..+.
T Consensus       248 ~C~~CH~~~~  257 (669)
T 3pmq_A          248 NCQTCHADNP  257 (669)
T ss_dssp             CCTTTSCCCT
T ss_pred             cchhhcCCcc
Confidence            8999999875

>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}

Probab=97.17  E-value=4.2e-05  Score=69.33  Aligned_cols=15  Identities=27%  Similarity=0.443  Sum_probs=14.5

Q ss_pred             ce-eccCccccccccc
Q 016833           24 RF-VLSDPEKREIYDQ   38 (382)
Q Consensus        24 AY-vLsD~~KR~~YD~   38 (382)
                      || |||||.+|+.||.
T Consensus        99 AY~vLsdp~~R~~Yd~  114 (207)
T 3bvo_A           99 AYKTLLAPLSRGLYLL  114 (207)
T ss_dssp             HHHHHHSHHHHHHHHH
T ss_pred             HHHHHCCHHHHHHHHH
Confidence            99 9999999999995

>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1

Probab=97.13  E-value=3.7e-05  Score=67.62  Aligned_cols=16  Identities=25%  Similarity=0.270  Sum_probs=15.3

Q ss_pred             ce-eccCcccccccccc
Q 016833           24 RF-VLSDPEKREIYDQY   39 (382)
Q Consensus        24 AY-vLsD~~KR~~YD~~   39 (382)
                      || |||||.+|+.||..
T Consensus        57 AY~vL~dp~~R~~Yd~~   73 (171)
T 1fpo_A           57 AWQTLRHPLMRAEYLLS   73 (171)
T ss_dssp             HHHHHHSHHHHHHHHHH
T ss_pred             HHHHHcCchHHHHHHHH
Confidence            99 99999999999985

>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A

Probab=96.87  E-value=0.00036  Score=49.18  Aligned_cols=28  Identities=29%  Similarity=0.840  Sum_probs=16.3

Q ss_pred             eeeCCCCCCCCccCCCcccCCCCCcccEEE
Q 016833          110 NVICTKCKGKGSKSGASMKCSGCQGSGMKV  139 (382)
Q Consensus       110 ~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~  139 (382)
                      ...|+.|+|+|....  .+|+.|+|+|.+.
T Consensus         9 ~~~C~~C~GsG~~i~--~~C~~C~G~G~v~   36 (53)
T 3lcz_A            9 ETTCPNCNGSGREEP--EPCPKCLGKGVIL   36 (53)
T ss_dssp             EEECTTTTTSCEETT--EECTTTTTSSEEE
T ss_pred             eccCcCCcccccCCC--CcCCCCCCcEEEE
Confidence            356666666665432  4566666666543

>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*

Probab=96.85  E-value=0.00038  Score=49.07  Aligned_cols=28  Identities=36%  Similarity=0.935  Sum_probs=18.1

Q ss_pred             eeeCCCCCCCCccCCCcccCCCCCcccEEE
Q 016833          110 NVICTKCKGKGSKSGASMKCSGCQGSGMKV  139 (382)
Q Consensus       110 ~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~  139 (382)
                      ...|+.|+|+|....  .+|+.|+|+|.++
T Consensus         9 ~~~C~~C~GsG~~~~--~~C~~C~G~G~v~   36 (53)
T 2bx9_A            9 EVACPKCERAGEIEG--TPCPACSGKGVIL   36 (53)
T ss_dssp             EEECTTTTTSSEETT--EECTTTTTSSEEE
T ss_pred             cccCCCCcceeccCC--CCCccCCCCccEE
Confidence            356777777776532  4677777777654

>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*

Probab=96.82  E-value=0.00071  Score=47.65  Aligned_cols=28  Identities=29%  Similarity=0.815  Sum_probs=24.5

Q ss_pred             ccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEec
Q 016833          127 MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETIN  167 (382)
Q Consensus       127 ~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~  167 (382)
                      .+|+.|+|+|.++             ..+|+.|+|.|.++.
T Consensus        10 ~~C~~C~GsG~~~-------------~~~C~~C~G~G~v~~   37 (53)
T 2bx9_A           10 VACPKCERAGEIE-------------GTPCPACSGKGVILT   37 (53)
T ss_dssp             EECTTTTTSSEET-------------TEECTTTTTSSEEEC
T ss_pred             ccCCCCcceeccC-------------CCCCccCCCCccEEE
Confidence            5899999999863             578999999999875

>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.58  E-value=0.00018  Score=56.42  Aligned_cols=16  Identities=19%  Similarity=0.443  Sum_probs=13.5

Q ss_pred             CCCCcchhhhcCCCCC
Q 016833            8 KSDNTKYYEILGVSKK   23 (382)
Q Consensus         8 ~~~~~~~Y~iLgv~~~   23 (382)
                      +....+||+||||+++
T Consensus        23 ~~~~~~~y~iLgv~~~   38 (90)
T 2ys8_A           23 IRNSKDSWDMLGVKPG   38 (90)
T ss_dssp             HHTCSSHHHHHTCCTT
T ss_pred             HhcCCCHHHHcCcCCC
Confidence            3456899999999998

>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1

Probab=96.58  E-value=0.00015  Score=55.46  Aligned_cols=32  Identities=9%  Similarity=0.181  Sum_probs=27.2

Q ss_pred             CcchhhhcCCCCC-----------------------------------ce-eccCccccccccccchhh
Q 016833           11 NTKYYEILGVSKK-----------------------------------RF-VLSDPEKREIYDQYGEDA   43 (382)
Q Consensus        11 ~~~~Y~iLgv~~~-----------------------------------AY-vLsD~~KR~~YD~~G~~g   43 (382)
                      ..++|+||||+++                                   || ||+|+.+|+. |.||+++
T Consensus        10 ~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~~~~f~~i~~AYe~L~~~~~r~~-~~~g~~~   77 (79)
T 1faf_A           10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHALMQELNSLWGTFKTEVYNLR-MNLGGTG   77 (79)
T ss_dssp             HHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCCHHHHHHHHHHHHHHHHHHHHHT-TCCSSCC
T ss_pred             HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHhhHHHHHH-HhcCCcc
Confidence            4689999999987                                   99 9999999988 5687654

>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A

Probab=96.20  E-value=0.00062  Score=60.34  Aligned_cols=16  Identities=31%  Similarity=0.519  Sum_probs=15.2

Q ss_pred             ce-eccCcccccccccc
Q 016833           24 RF-VLSDPEKREIYDQY   39 (382)
Q Consensus        24 AY-vLsD~~KR~~YD~~   39 (382)
                      || |||||.+|+.||..
T Consensus        64 AY~vL~dp~~R~~Yd~~   80 (181)
T 3uo3_A           64 AYHTLKDPLRRSQYMLK   80 (181)
T ss_dssp             HHHHHHSHHHHHHHHHH
T ss_pred             HHHHHcChHHHHHHHHH
Confidence            99 99999999999983

>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=93.45  E-value=0.0099  Score=44.13  Aligned_cols=15  Identities=13%  Similarity=0.346  Sum_probs=12.3

Q ss_pred             CCCcchhhhcCCCC-C
Q 016833            9 SDNTKYYEILGVSK-K   23 (382)
Q Consensus         9 ~~~~~~Y~iLgv~~-~   23 (382)
                      +...++|+||||++ +
T Consensus        11 m~~~~~y~iLgl~~~~   26 (71)
T 2guz_A           11 MNSKEALQILNLTENT   26 (71)
T ss_dssp             CCHHHHHHHTTCCTTT
T ss_pred             CCHHHHHHHcCCCCCC
Confidence            34579999999998 5

>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=91.70  E-value=0.011  Score=45.94  Aligned_cols=15  Identities=13%  Similarity=-0.057  Sum_probs=12.9

Q ss_pred             CCCcchhhhcCCCCC
Q 016833            9 SDNTKYYEILGVSKK   23 (382)
Q Consensus         9 ~~~~~~Y~iLgv~~~   23 (382)
                      +...++|+||||+++
T Consensus        13 ~~~~~~y~vLgv~~~   27 (88)
T 1iur_A           13 SILKEVTSVVEQAWK   27 (88)
T ss_dssp             SCHHHHHHHHHHTTS
T ss_pred             ccHHHHHHHhCCCCC
Confidence            445799999999988

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	382
d1c3ga2	90	b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Ba	3e-24
d1nlta3	74	g.54.1.1 (A:139-212) Mitochondrial protein import	5e-23
d1nlta2	80	b.4.1.1 (A:258-337) Mitochondrial protein import p	5e-21
d1exka_	79	g.54.1.1 (A:) Cysteine-rich domain of the chaperon	8e-13
d1c3ga1	80	b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Ba	5e-11
d1c3ga1	80	b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Ba	0.002
d1nlta1	74	b.4.1.1 (A:110-138,A:213-257) Mitochondrial protei	6e-09
d1m1qa_	90	a.138.1.3 (A:) Flavocytochrome c3 (respiratory fum	1e-06
d1gh6a_	114	a.2.3.1 (A:) Large T antigen, the N-terminal J dom	5e-04
d1xbla_	75	a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain	9e-04
d1hdja_	77	a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9	0.003

>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 90

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 93.1 bits (231), Expect = 3e-24
 Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 2/91 (2%)

Query: 230 FKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPM 289
           FKR GDDL     LS  E+L GF   I  +DGR L +       V+P Q      +GMP 
Sbjct: 2   FKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQ--PVQPSQTSTYPGQGMPT 59

Query: 290 YQRPFMRGKLYIHFTVDFPESLSPDQCKMLE 320
            + P  RG L + + VD+P SL+  Q + ++
Sbjct: 60  PKNPSQRGNLIVKYKVDYPISLNDAQKRAID 90

>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 74

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 89.4 bits (221), Expect = 5e-23
 Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 1/75 (1%)

Query: 109 RNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETIND 168
           + ++C +C+G+G K GA  KC+ C G G+K   R +GP MIQ+ Q  C+ C GTG+ I+ 
Sbjct: 1   KQILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGP-MIQRFQTECDVCHGTGDIIDP 59

Query: 169 KDRCPQCKGEKVIQE 183
           KDRC  C G+KV  E
Sbjct: 60  KDRCKSCNGKKVENE 74

>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 80

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 84.2 bits (208), Expect = 5e-21
 Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 1/80 (1%)

Query: 230 FKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPM 289
           FKR GDDL  E  + L  A+ G +F + H+ G  L +   PGEV+ P   K I  +GMP+
Sbjct: 2   FKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPI 61

Query: 290 YQRPFMRGKLYIHFTVDFPE 309
            +     G L I FT+  PE
Sbjct: 62  PKYG-GYGNLIIKFTIKDPE 80

>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]} Length = 79

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Cysteine-rich domain of the chaperone protein DnaJ
species: Escherichia coli [TaxId: 562]

 Score = 61.3 bits (148), Expect = 8e-13
 Identities = 21/84 (25%), Positives = 34/84 (40%), Gaps = 6/84 (7%)

Query: 100 GTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNEC 159
           G +K++ +     C  C G G+K G   +         +V +R         +Q  C  C
Sbjct: 1   GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQ----GFFAVQQTCPHC 56

Query: 160 KGTGETINDKDRCPQCKGEKVIQE 183
           +G G  I  KD C +C G   ++ 
Sbjct: 57  QGRGTLI--KDPCNKCHGHGRVER 78

>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 80

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 56.1 bits (135), Expect = 5e-11
 Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 6/71 (8%)

Query: 159 CKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVT-GD 217
             G  ++   K       G     EK  +++ ++ G + G KIT+  + D  P T     
Sbjct: 15  FVGKKKSF--KIGRKGPHGAS---EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKT 69

Query: 218 IVFVLQQKEHP 228
           + FV+Q+K HP
Sbjct: 70  LQFVIQEKSHP 80

>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 80

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 34.5 bits (79), Expect = 0.002
 Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 4/39 (10%)

Query: 84  EDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSK 122
           E V   L VSLEDL+ G  K   + R        G   K
Sbjct: 1   ETVQVNLPVSLEDLFVGKKKSFKIGRK----GPHGASEK 35

>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 74

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 50.1 bits (119), Expect = 6e-09
 Identities = 25/58 (43%), Positives = 41/58 (70%)

Query: 170 DRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEH 227
           +   + +  K+   +K+LEV VE GM++GQ+I F GEAD+APD + GD+VF++ ++ H
Sbjct: 16  EELYKGRTAKLALNRKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPH 73

>d1m1qa_ a.138.1.3 (A:) Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain {Shewanella oneidensis [TaxId: 70863]} Length = 90

class: All alpha proteins
fold: Multiheme cytochromes
superfamily: Multiheme cytochromes
family: Di-heme elbow motif
domain: Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain
species: Shewanella oneidensis [TaxId: 70863]

 Score = 44.0 bits (103), Expect = 1e-06
 Identities = 11/82 (13%), Positives = 19/82 (23%), Gaps = 7/82 (8%)

Query: 109 RNVICTKCKGKGSKSGASM----KCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGE 164
            +  C  C   G+ S        +C  C G   ++   H            C+       
Sbjct: 10  ESGGCESCHKDGTPSADGAFEFAQCQSCHGKLSEMDAVHKPHDGNLVCA-DCHAVHDMNV 68

Query: 165 TINDKDRCPQCKGEKVIQEKKV 186
                  C  C  +       +
Sbjct: 69  GQKPT--CESCHDDGRTSASVL 88

>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]} Length = 114

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]

 Score = 37.1 bits (85), Expect = 5e-04
 Identities = 8/107 (7%), Positives = 24/107 (22%), Gaps = 46/107 (42%)

Query: 8   KSDNTKYYEILGVS----------KKRF--------------------------VLSDPE 31
           + ++ +  ++LG+           +K +                           + D  
Sbjct: 4   REESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGV 63

Query: 32  KREIYDQYGEDALKEGMGGGGGAH--------DPFDIF--QSFFGGS 68
           K      +G       +   G           +  ++F  +      
Sbjct: 64  KYAHQPDFGGFWDATEIPTYGTDEWEQWWNAFNEENLFCSEEMPSSD 110

>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 75

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

 Score = 35.4 bits (81), Expect = 9e-04
 Identities = 20/71 (28%), Positives = 26/71 (36%), Gaps = 38/71 (53%)

Query: 14 YYEILGVS--------KKRF------------------------------VLSDPEKREI 35
          YYEILGVS        +K +                              VL+D +KR  
Sbjct: 5  YYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAA 64

Query: 36 YDQYGEDALKE 46
          YDQYG  A ++
Sbjct: 65 YDQYGHAAFEQ 75

>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]} Length = 77

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.9 bits (77), Expect = 0.003
 Identities = 17/24 (70%), Positives = 20/24 (83%), Gaps = 1/24 (4%)

Query: 26 VLSDPEKREIYDQYGEDALKEGMG 49
          VLSDP KREI+D+YGE+ LK G G
Sbjct: 54 VLSDPRKREIFDRYGEEGLK-GSG 76

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	382
d1c3ga2	90	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	99.93
d1nlta2	80	Mitochondrial protein import protein mas5 (Hsp40,	99.88
d1nlta3	74	Mitochondrial protein import protein mas5 (Hsp40,	99.71
d1nlta1	74	Mitochondrial protein import protein mas5 (Hsp40,	99.68
d1c3ga1	80	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	99.67
d1exka_	79	Cysteine-rich domain of the chaperone protein DnaJ	99.56
d1nlta1	74	Mitochondrial protein import protein mas5 (Hsp40,	99.26
d1hdja_	77	HSP40 {Human (Homo sapiens) [TaxId: 9606]}	99.02
d1xbla_	75	DnaJ chaperone, N-terminal (J) domain {Escherichia	98.91
d1c3ga1	80	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	98.68
d1c3ga2	90	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	98.67
d1nlta2	80	Mitochondrial protein import protein mas5 (Hsp40,	98.45
d1wjza_	94	CSL-type zinc finger-containing protein 3 (J-domai	98.28
d1gh6a_	114	Large T antigen, the N-terminal J domain {Simian v	98.2
d1exka_	79	Cysteine-rich domain of the chaperone protein DnaJ	97.99
d1fpoa1	76	HSC20 (HSCB), N-terminal (J) domain {Escherichia c	97.63
d1nlta3	74	Mitochondrial protein import protein mas5 (Hsp40,	97.49
d1fafa_	79	Large T antigen, the N-terminal J domain {Murine p	96.98
d1m1qa_	90	Flavocytochrome c3 (respiratory fumarate reductase	96.2
d1nz6a_	98	Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}	95.19
d1iura_	88	Hypothetical protein KIAA0730 {Human (Homo sapiens	91.35
d1m1qa_	90	Flavocytochrome c3 (respiratory fumarate reductase	81.98

>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.93  E-value=9e-27  Score=183.92  Aligned_cols=90  Identities=38%  Similarity=0.647  Sum_probs=85.6

Q ss_pred             ccccccccceeeeccCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECC
Q 016833          229 KFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFP  308 (382)
Q Consensus       229 ~F~R~g~DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~i~g~GmP~~~~~~~~GdL~i~~~V~~P  308 (382)
                      .|+|+|+||+++++|||+|||+|+++.|+|+||+.+.|++|++  ++||++++|+|+|||.+++++.+|||||+|+|+||
T Consensus         1 ~F~R~G~DL~~~~~I~~~eal~G~~~~i~~~dG~~i~i~ip~~--~~~g~~~~i~g~G~p~~~~~~~rGdL~V~~~v~~P   78 (90)
T d1c3ga2           1 NFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQP--VQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYP   78 (90)
T ss_dssp             SEEEETTEEEEEECCBHHHHHHCEEEEEECSSSCEEEEEESSC--CCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCC
T ss_pred             CCeEeCCeEEEEEEeCHHHHhcCCeEEEecccccceecccccc--cccccccccCCCCCCcCCCCCCcCCEEEEEEEEcC
Confidence            4999999999999999999999999999999999999999988  79999999999999998777789999999999999


Q ss_pred             CCCCHHHHHHHH
Q 016833          309 ESLSPDQCKMLE  320 (382)
Q Consensus       309 ~~l~~~~~~~l~  320 (382)
                      ++||++|+++|+
T Consensus        79 ~~ls~~qk~~lE   90 (90)
T d1c3ga2          79 ISLNDAQKRAID   90 (90)
T ss_dssp             SSCCTTHHHHTC
T ss_pred             CCCCHHHHHhhC
Confidence            999999998874

>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.88  E-value=2.4e-23  Score=160.51  Aligned_cols=80  Identities=40%  Similarity=0.634  Sum_probs=75.9

Q ss_pred             ccccccccceeeeccCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECC
Q 016833          229 KFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFP  308 (382)
Q Consensus       229 ~F~R~g~DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~i~g~GmP~~~~~~~~GdL~i~~~V~~P  308 (382)
                      .|+|+|+||+++++|+|.|||+|+++.|+|+||+.+.|++|++.++++|++++|+|+|||..+ ...+|||||+|+|+||
T Consensus         1 tF~R~G~dL~~~~~I~~~eal~G~~~~i~~~dg~~~~i~i~~~~~~~~g~~~~i~g~G~p~~~-~~~~GDL~v~~~V~~P   79 (80)
T d1nlta2           1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPK-YGGYGNLIIKFTIKDP   79 (80)
T ss_dssp             SCEEETTEEEEEEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSS-SCSBCCEEEEEEEECC
T ss_pred             CcEEeCCEEEEEEEeCHHHHhCCCEEEEEecCcceEEEEeCCCCCcCCCCEEEecCCCCCCCC-cCCcCcEEEEEEEEcC
Confidence            499999999999999999999999999999999999999999988999999999999999985 4579999999999999


Q ss_pred             C
Q 016833          309 E  309 (382)
Q Consensus       309 ~  309 (382)
                      +
T Consensus        80 k   80 (80)
T d1nlta2          80 E   80 (80)
T ss_dssp             C
T ss_pred             C
Confidence            6

>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.71  E-value=7.3e-18  Score=127.34  Aligned_cols=74  Identities=47%  Similarity=1.105  Sum_probs=68.4

Q ss_pred             eeeeCCCCCCCCccCCCcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCCCceEEEe
Q 016833          109 RNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQE  183 (382)
Q Consensus       109 r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~G~g~~~~  183 (382)
                      |+++|+.|+|+|++.++..+|+.|+|+|+++.+++++| |+++++.+|+.|+|+|+++..+++|+.|+|.++++|
T Consensus         1 r~v~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~g~-~~~~~~~~C~~C~G~G~~i~~~~~C~~C~G~g~v~E   74 (74)
T d1nlta3           1 KQILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGP-MIQRFQTECDVCHGTGDIIDPKDRCKSCNGKKVENE   74 (74)
T ss_dssp             EEEECTTTTTCSBSTTTCCCCTTSSSSSCEEEEEESSS-EEEEEECSCTTCSSSSSCCCTTSBCSSSTTSCEEEE
T ss_pred             CccCCcCCcccccCCCCCCCCCCCcceeeeeEEEEecC-cEEEEEEECccCccceEEeCCCCCCCCCCCeeEeCC
Confidence            57899999999999877788999999999999999998 567889999999999999998999999999999875

>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.68  E-value=4e-17  Score=123.22  Aligned_cols=74  Identities=50%  Similarity=0.950  Sum_probs=67.1

Q ss_pred             ccCCceeEeccccccccccCcceeEEeeceeeeCCCCCCCCccCCCcccCCCCCcccEEEEEEecCCccceeecccCCCC
Q 016833           80 QRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNEC  159 (382)
Q Consensus        80 ~~kg~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C  159 (382)
                      |+++.|+.++|.|||+|+|+|+++++.+.                                                   
T Consensus         1 Prkg~di~~~l~isleea~~G~~~~~~~~---------------------------------------------------   29 (74)
T d1nlta1           1 PQRGKDIKHEISASLEELYKGRTAKLALN---------------------------------------------------   29 (74)
T ss_dssp             CCBCCCEEEEEEECTTHHHHCEEEEEEEE---------------------------------------------------
T ss_pred             CCCCCCEEEEEEecHHHHHhhcccceeec---------------------------------------------------
Confidence            46799999999999999999999887543                                                   


Q ss_pred             cceeEEecCCCCCCCCCCceEEEeceEEEEEeccCCCCCCEEEeCCCCCCCCCCCCccEEEEEEEecCC
Q 016833          160 KGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHP  228 (382)
Q Consensus       160 ~G~G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G~~~g~~i~~~geG~~~~g~~~GDl~v~i~~k~h~  228 (382)
                                              .+.++|+||+|+++|++|+|+|+|++.+++.+|||+|+|++++|.
T Consensus        30 ------------------------~~~~~i~Ip~G~~~G~~ir~~g~G~~~~~~~~GDl~v~i~~~pHk   74 (74)
T d1nlta1          30 ------------------------RKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHK   74 (74)
T ss_dssp             ------------------------EEEEEEEECTTCCTTCEEEETTCSCCCTTCBCCCEEEEEEECCCS
T ss_pred             ------------------------CccEEEEecccccCCeEEEecCCcCCCCCCCCCCEEEEEEecCCC
Confidence                                    246889999999999999999999999999999999999999995

>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.67  E-value=4.3e-17  Score=124.95  Aligned_cols=79  Identities=35%  Similarity=0.589  Sum_probs=66.9

Q ss_pred             ceeEeccccccccccCcceeEEeeceeeeCCCCCCCCccCCCcccCCCCCcccEEEEEEecCCccceeecccCCCCccee
Q 016833           84 EDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTG  163 (382)
Q Consensus        84 ~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G  163 (382)
                      +++.++|.|||||+|+|+++++++.|..    |+                                           |.+
T Consensus         1 e~v~~~l~vtLee~~~G~~k~i~~~r~~----~~-------------------------------------------g~~   33 (80)
T d1c3ga1           1 ETVQVNLPVSLEDLFVGKKKSFKIGRKG----PH-------------------------------------------GAS   33 (80)
T ss_dssp             CEEEEEEEECHHHHHHTCEEEEEEEEEE----TT-------------------------------------------TEE
T ss_pred             CCEEEEeEEEHHHHhCCCceEeecceec----cc-------------------------------------------CCC
Confidence            4789999999999999999999877531    11                                           111


Q ss_pred             EEecCCCCCCCCCCceEEEeceEEEEEeccCCCCCCEEEeCCCCCCCCC-CCCccEEEEEEEecCC
Q 016833          164 ETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPD-TVTGDIVFVLQQKEHP  228 (382)
Q Consensus       164 ~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G~~~g~~i~~~geG~~~~g-~~~GDl~v~i~~k~h~  228 (382)
                                         +.++++|+||||+++|++|+|+|+|++.++ +.+|||+|+|++++||
T Consensus        34 -------------------~~~~~~v~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~~~i~~~~HP   80 (80)
T d1c3ga1          34 -------------------EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHP   80 (80)
T ss_dssp             -------------------EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEECCCS
T ss_pred             -------------------ceEEEEEEECCCCCCCcEEEECCccccCcCCCCCCCEEEEEEeCCCC
Confidence                               356799999999999999999999999764 6899999999999997

>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Cysteine-rich domain of the chaperone protein DnaJ
species: Escherichia coli [TaxId: 562]

Probab=99.56  E-value=1.2e-15  Score=116.34  Aligned_cols=77  Identities=31%  Similarity=0.746  Sum_probs=65.5

Q ss_pred             cceeEEeeceeeeCCCCCCCCccCCCc-ccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCCCc
Q 016833          100 GTSKKLSLSRNVICTKCKGKGSKSGAS-MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGE  178 (382)
Q Consensus       100 G~~~~i~~~r~~~C~~C~G~G~~~~~~-~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~G~  178 (382)
                      |++++|.|++.+.|+.|+|+|++.+.. .+|+.|+|+|++..  +.++   ++++.+|+.|+|+|+++.  ++|+.|+|+
T Consensus         1 G~~k~i~i~~~~~C~~C~G~G~~~g~~~~~C~~C~G~G~v~~--~~g~---~~~~~~C~~C~G~G~~i~--~~C~~C~G~   73 (79)
T d1exka_           1 GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQM--RQGF---FAVQQTCPHCQGRGTLIK--DPCNKCHGH   73 (79)
T ss_dssp             CTTTSCCCCCEEECGGGTTTSBCSSSCCEECTTTTTSSEEEE--EETT---EEEEEECTTTTTSSEECS--SBCGGGTTS
T ss_pred             CceEEEEeeeeccCCCCcCcccCCCccceeCCCccceeEEEE--eccc---ceeeEECcccCcceeECC--CCCCCCCCc
Confidence            678899999999999999999998764 78999999998642  3333   355678999999999986  899999999


Q ss_pred             eEEEe
Q 016833          179 KVIQE  183 (382)
Q Consensus       179 g~~~~  183 (382)
                      |+++.
T Consensus        74 G~v~k   78 (79)
T d1exka_          74 GRVER   78 (79)
T ss_dssp             SEEEC
T ss_pred             eEeec
Confidence            99875

>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.26  E-value=3.5e-12  Score=95.60  Aligned_cols=70  Identities=20%  Similarity=0.254  Sum_probs=62.6

Q ss_pred             cccccceeeeccCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEE
Q 016833          232 RKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVD  306 (382)
Q Consensus       232 R~g~DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~i~g~GmP~~~~~~~~GdL~i~~~V~  306 (382)
                      |+|.||+++++|||.||+.|+++.|++ +.+.+.|+||+|  +++|+.++++|+|.+..+  ...|||||++++.
T Consensus         2 rkg~di~~~l~isleea~~G~~~~~~~-~~~~~~i~Ip~G--~~~G~~ir~~g~G~~~~~--~~~GDl~v~i~~~   71 (74)
T d1nlta1           2 QRGKDIKHEISASLEELYKGRTAKLAL-NRKILEVHVEPG--MKDGQRIVFKGEADQAPD--VIPGDVVFIVSER   71 (74)
T ss_dssp             CBCCCEEEEEEECTTHHHHCEEEEEEE-EEEEEEEEECTT--CCTTCEEEETTCSCCCTT--CBCCCEEEEEEEC
T ss_pred             CCCCCEEEEEEecHHHHHhhcccceee-cCccEEEEeccc--ccCCeEEEecCCcCCCCC--CCCCCEEEEEEec
Confidence            789999999999999999999999986 456799999999  799999999999988652  4589999999874

>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=1.3e-11  Score=93.14  Aligned_cols=36  Identities=53%  Similarity=1.054  Sum_probs=33.6

Q ss_pred             CcchhhhcCCCCC------------------------------------ce-eccCccccccccccchhhhhC
Q 016833           11 NTKYYEILGVSKK------------------------------------RF-VLSDPEKREIYDQYGEDALKE   46 (382)
Q Consensus        11 ~~~~Y~iLgv~~~------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~   46 (382)
                      .+|||+||||+++                                    || |||||++|+.||+||++++++
T Consensus         2 ~kdyY~iLgv~~~as~~eIk~ay~~l~~~~hPD~~~~~~~~~~~~~i~~Ay~vLsdp~~R~~YD~~g~~~~~g   74 (77)
T d1hdja_           2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKG   74 (77)
T ss_dssp             CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCCS
T ss_pred             CCChHHHcCCCCCcCHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcC
Confidence            4699999999999                                    99 999999999999999998864

>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=98.91  E-value=3.9e-11  Score=90.01  Aligned_cols=35  Identities=57%  Similarity=1.014  Sum_probs=32.0

Q ss_pred             CcchhhhcCCCCC-------------------------------------ce-eccCccccccccccchhhhh
Q 016833           11 NTKYYEILGVSKK-------------------------------------RF-VLSDPEKREIYDQYGEDALK   45 (382)
Q Consensus        11 ~~~~Y~iLgv~~~-------------------------------------AY-vLsD~~KR~~YD~~G~~g~~   45 (382)
                      .+|||+||||+++                                     || |||||++|+.||+||+.++.
T Consensus         2 k~dyY~vLgv~~~As~~eIk~aYr~l~~~~HPDk~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~e   74 (75)
T d1xbla_           2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFE   74 (75)
T ss_dssp             CCCTTTTTCCSSSCCHHHHHHHHHHHHHHTCCTTCTTTCHHHHHHHHHHHHHHHTTSSHHHHHHHHHTTSSCC
T ss_pred             CCCHHHHcCCCCCcCHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHhCccccC
Confidence            5799999999999                                     99 99999999999999987653

>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.68  E-value=2.2e-08  Score=75.44  Aligned_cols=69  Identities=20%  Similarity=0.179  Sum_probs=56.6

Q ss_pred             ccceeeeccCHHHHhCCCEEEEE----ecCCc----EEEEEeCCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEE
Q 016833          235 DDLFVEHTLSLTEALCGFQFVIT----HLDGR----QLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVD  306 (382)
Q Consensus       235 ~DL~~~~~I~l~eAl~G~~~~i~----tldG~----~l~i~~p~g~vi~~g~~~~i~g~GmP~~~~~~~~GdL~i~~~V~  306 (382)
                      +||.+.+.|||.||..|+++.|.    ..+|.    .+.|.||||  +++|+.++++|+|..... ....|||||.+++.
T Consensus         1 e~v~~~l~vtLee~~~G~~k~i~~~r~~~~g~~~~~~~~v~Ip~G--~~~G~~i~~~g~G~~~~~-~~~~GDl~~~i~~~   77 (80)
T d1c3ga1           1 ETVQVNLPVSLEDLFVGKKKSFKIGRKGPHGASEKTQIDIQLKPG--WKAGTKITYKNQGDYNPQ-TGRRKTLQFVIQEK   77 (80)
T ss_dssp             CEEEEEEEECHHHHHHTCEEEEEEEEEETTTEEEEEEEEEECCTT--CCTTCEEEESSCSSBCSS-SSCBCEEEEEEEEC
T ss_pred             CCEEEEeEEEHHHHhCCCceEeecceecccCCCceEEEEEEECCC--CCCCcEEEECCccccCcC-CCCCCCEEEEEEeC
Confidence            47889999999999999977664    34443    589999999  899999999999987643 23579999999875

>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.67  E-value=9.8e-09  Score=79.23  Aligned_cols=79  Identities=22%  Similarity=0.364  Sum_probs=64.8

Q ss_pred             cCCceeEeccccccccccCcceeEEeeceeeeCCCCCCCCccCCCcccCCCCCcccEEEEEEecCCccceeecccCCCCc
Q 016833           81 RRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECK  160 (382)
Q Consensus        81 ~kg~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~  160 (382)
                      ++|.|+.+.+.|||.|++.|+++++..-                                                    
T Consensus         4 R~G~DL~~~~~I~~~eal~G~~~~i~~~----------------------------------------------------   31 (90)
T d1c3ga2           4 RDGDDLIYTLPLSFKESLLGFSKTIQTI----------------------------------------------------   31 (90)
T ss_dssp             EETTEEEEEECCBHHHHHHCEEEEEECS----------------------------------------------------
T ss_pred             EeCCeEEEEEEeCHHHHhcCCeEEEecc----------------------------------------------------
Confidence            5689999999999999999999886521                                                    


Q ss_pred             ceeEEecCCCCCCCCCCceEEEeceEEEEEeccCCCCCCEEEeCCCCCCCC--CCCCccEEEEEEEecCCccccc
Q 016833          161 GTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAP--DTVTGDIVFVLQQKEHPKFKRK  233 (382)
Q Consensus       161 G~G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G~~~g~~i~~~geG~~~~--g~~~GDl~v~i~~k~h~~F~R~  233 (382)
                                            ..+.++|+||+|+++|++++++|+|.+.+  ....|||+|++++.-+..+..+
T Consensus        32 ----------------------dG~~i~i~ip~~~~~g~~~~i~g~G~p~~~~~~~rGdL~V~~~v~~P~~ls~~   84 (90)
T d1c3ga2          32 ----------------------DGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDA   84 (90)
T ss_dssp             ----------------------SSCEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCSSCCTT
T ss_pred             ----------------------cccceecccccccccccccccCCCCCCcCCCCCCcCCEEEEEEEEcCCCCCHH
Confidence                                  02457899999999999999999998743  3567999999999876655544

>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.45  E-value=1e-07  Score=71.69  Aligned_cols=73  Identities=19%  Similarity=0.295  Sum_probs=59.1

Q ss_pred             cCCceeEeccccccccccCcceeEEeeceeeeCCCCCCCCccCCCcccCCCCCcccEEEEEEecCCccceeecccCCCCc
Q 016833           81 RRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECK  160 (382)
Q Consensus        81 ~kg~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~  160 (382)
                      +.|.|+.++++|||.|++.|+++.+...                                                    
T Consensus         4 R~G~dL~~~~~I~~~eal~G~~~~i~~~----------------------------------------------------   31 (80)
T d1nlta2           4 RDGDDLVYEAEIDLLTAIAGGEFALEHV----------------------------------------------------   31 (80)
T ss_dssp             EETTEEEEEEEEEHHHHHHCBCCEEECS----------------------------------------------------
T ss_pred             EeCCEEEEEEEeCHHHHhCCCEEEEEec----------------------------------------------------
Confidence            5689999999999999999998876522                                                    


Q ss_pred             ceeEEecCCCCCCCCCCceEEEeceEEEEEeccC--CCCCCEEEeCCCCCCCC-CCCCccEEEEEEEecC
Q 016833          161 GTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKG--MQNGQKITFPGEADEAP-DTVTGDIVFVLQQKEH  227 (382)
Q Consensus       161 G~G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G--~~~g~~i~~~geG~~~~-g~~~GDl~v~i~~k~h  227 (382)
                                            ..+.++|.||++  +++|++++++|+|.+.. +...|||+|.++++-+
T Consensus        32 ----------------------dg~~~~i~i~~~~~~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~V~~P   79 (80)
T d1nlta2          32 ----------------------SGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDP   79 (80)
T ss_dssp             ----------------------SSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCEEEEEEEECC
T ss_pred             ----------------------CcceEEEEeCCCCCcCCCCEEEecCCCCCCCCcCCcCcEEEEEEEEcC
Confidence                                  023466778777  99999999999999754 4578999999998743

>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.28  E-value=5e-08  Score=75.75  Aligned_cols=31  Identities=26%  Similarity=0.566  Sum_probs=28.3

Q ss_pred             CCCcchhhhcCCCCC-------------------------------------------ce-eccCcccccccccc
Q 016833            9 SDNTKYYEILGVSKK-------------------------------------------RF-VLSDPEKREIYDQY   39 (382)
Q Consensus         9 ~~~~~~Y~iLgv~~~-------------------------------------------AY-vLsD~~KR~~YD~~   39 (382)
                      ...+|||+||||+++                                           || ||+||++|+.||+.
T Consensus        13 ~~~~d~Y~iLgv~~~as~~eIk~aY~~l~~~~HPDk~~~~~~~~~~~~a~~~f~~I~~Ay~vL~d~~~R~~YD~~   87 (94)
T d1wjza_          13 TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQ   87 (94)
T ss_dssp             SSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHH
T ss_pred             hhccChHHHcCCCCCcCHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHc
Confidence            456799999999999                                           99 99999999999975

>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]

Probab=98.20  E-value=5.8e-08  Score=78.05  Aligned_cols=33  Identities=15%  Similarity=0.281  Sum_probs=29.8

Q ss_pred             CcchhhhcCCCCC-----------------------------------ce-eccCccccccccccchhh
Q 016833           11 NTKYYEILGVSKK-----------------------------------RF-VLSDPEKREIYDQYGEDA   43 (382)
Q Consensus        11 ~~~~Y~iLgv~~~-----------------------------------AY-vLsD~~KR~~YD~~G~~g   43 (382)
                      ..+||+||||+++                                   || ||||++||+.||++|...
T Consensus         7 ~~~ly~iLGv~~~a~~~~~~IKkAYrkla~k~HPDk~~~~e~F~~I~~AY~vLsd~~kR~~YD~~~~~~   75 (114)
T d1gh6a_           7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGVKYAHQPDFGGFW   75 (114)
T ss_dssp             HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCTTTTTHHHHHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHhCCHHHHHHHhccCCCC
Confidence            4689999999987                                   99 999999999999988654

>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Cysteine-rich domain of the chaperone protein DnaJ
species: Escherichia coli [TaxId: 562]

Probab=97.99  E-value=9.8e-07  Score=65.98  Aligned_cols=58  Identities=31%  Similarity=0.766  Sum_probs=43.7

Q ss_pred             cccCcceeEEeeceeeeCCCCCCCCccCC------CcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEec
Q 016833           96 DLYNGTSKKLSLSRNVICTKCKGKGSKSG------ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETIN  167 (382)
Q Consensus        96 e~~~G~~~~i~~~r~~~C~~C~G~G~~~~------~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~  167 (382)
                      +.++|...+ .-.....|+.|+|+|....      ...+|+.|+|+|.++             ..+|+.|+|+|.+.+
T Consensus        15 ~~C~G~G~~-~g~~~~~C~~C~G~G~v~~~~g~~~~~~~C~~C~G~G~~i-------------~~~C~~C~G~G~v~k   78 (79)
T d1exka_          15 DVCHGSGAK-PGTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLI-------------KDPCNKCHGHGRVER   78 (79)
T ss_dssp             GGGTTTSBC-SSSCCEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEEC-------------SSBCGGGTTSSEEEC
T ss_pred             CCCcCcccC-CCccceeCCCccceeEEEEecccceeeEECcccCcceeEC-------------CCCCCCCCCceEeec
Confidence            566777654 2234578999999996531      235899999999975             578999999998864

>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=97.63  E-value=2.1e-06  Score=63.59  Aligned_cols=15  Identities=27%  Similarity=0.330  Sum_probs=14.1

Q ss_pred             ce-eccCccccccccc
Q 016833           24 RF-VLSDPEKREIYDQ   38 (382)
Q Consensus        24 AY-vLsD~~KR~~YD~   38 (382)
                      || ||+||.+|+.|+.
T Consensus        57 Ay~vL~dp~~R~~Yll   72 (76)
T d1fpoa1          57 AWQTLRHPLMRAEYLL   72 (76)
T ss_dssp             HHHHHHSHHHHHHHHH
T ss_pred             HHHHhCCHHHHHHHHH
Confidence            99 9999999999974

>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.49  E-value=1.1e-05  Score=59.27  Aligned_cols=57  Identities=26%  Similarity=0.512  Sum_probs=39.2

Q ss_pred             ccCcceeEEeeceeeeCCCCCCCCccCC----------CcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEe
Q 016833           97 LYNGTSKKLSLSRNVICTKCKGKGSKSG----------ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETI  166 (382)
Q Consensus        97 ~~~G~~~~i~~~r~~~C~~C~G~G~~~~----------~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~  166 (382)
                      .++|...+- . ....|+.|+|+|....          ...+|+.|+|+|.++           ....+|+.|+|+|.+.
T Consensus         7 ~C~G~G~~~-~-~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i-----------~~~~~C~~C~G~g~v~   73 (74)
T d1nlta3           7 ECEGRGGKK-G-AVKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDII-----------DPKDRCKSCNGKKVEN   73 (74)
T ss_dssp             TTTTCSBST-T-TCCCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCC-----------CTTSBCSSSTTSCEEE
T ss_pred             CCcccccCC-C-CCCCCCCCcceeeeeEEEEecCcEEEEEEECccCccceEEe-----------CCCCCCCCCCCeeEeC
Confidence            345555331 1 2357999999997531          125799999999754           2256899999999763

>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]

Probab=96.98  E-value=3e-05  Score=57.58  Aligned_cols=30  Identities=10%  Similarity=0.161  Sum_probs=26.8

Q ss_pred             CCcchhhhcCCCCC-----------------------------------ce-eccCcccccccccc
Q 016833           10 DNTKYYEILGVSKK-----------------------------------RF-VLSDPEKREIYDQY   39 (382)
Q Consensus        10 ~~~~~Y~iLgv~~~-----------------------------------AY-vLsD~~KR~~YD~~   39 (382)
                      ...+||+||||+++                                   || ||+|+.+|..||..
T Consensus         9 ~~~~~y~iLgl~~~~~~~~~~IkkaYr~l~~~~HPDk~g~~e~~~~in~Ay~~L~d~~~r~~~~~~   74 (79)
T d1fafa_           9 DKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHALMQELNSLWGTFKTEVYNLRMNLG   74 (79)
T ss_dssp             HHHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCCHHHHHHHHHHHHHHHHHHHHHTTCCS
T ss_pred             HHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHhCcccCCCHHHHHHHHHHHHHHCCHHHHHHHccC
Confidence            34689999999986                                   99 99999999999974

>d1m1qa_ a.138.1.3 (A:) Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain {Shewanella oneidensis [TaxId: 70863]}

class: All alpha proteins
fold: Multiheme cytochromes
superfamily: Multiheme cytochromes
family: Di-heme elbow motif
domain: Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain
species: Shewanella oneidensis [TaxId: 70863]

Probab=96.20  E-value=5.3e-05  Score=57.26  Aligned_cols=67  Identities=16%  Similarity=0.401  Sum_probs=47.5

Q ss_pred             eCCCCCCCCccCCCc----ccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCCCceEE
Q 016833          112 ICTKCKGKGSKSGAS----MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVI  181 (382)
Q Consensus       112 ~C~~C~G~G~~~~~~----~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~G~g~~  181 (382)
                      .|..|+|.|......    ..|..|+|+|.........++ ....-..|..|+|.|+.+.  +.|..|++.+.+
T Consensus        13 ~C~~CH~~~~~~~~~~~~~~~C~~CHg~~~~~~~~~~~h~-~~~~c~~CH~~H~~~~~~~--~~C~~CH~~gr~   83 (90)
T d1m1qa_          13 GCESCHKDGTPSADGAFEFAQCQSCHGKLSEMDAVHKPHD-GNLVCADCHAVHDMNVGQK--PTCESCHDDGRT   83 (90)
T ss_dssp             CGGGTSGGGCCCSSSHHHHHHHHHHHCCGGGSCTTTGGGT-TTCCGGGTCCTTTSBTTCC--CCSTTTCSSCCC
T ss_pred             CCCCcCCCCccccCCCCCCCcCcccCCCceeEeecccccc-CccccccCccccCCCCcCC--CccccccCCCcc
Confidence            699999998765432    469999999975432222221 1234678999999987765  889999998743

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

Probab=95.19  E-value=0.0011  Score=50.84  Aligned_cols=13  Identities=8%  Similarity=0.483  Sum_probs=12.7

Q ss_pred             ce-eccCccccccc
Q 016833           24 RF-VLSDPEKREIY   36 (382)
Q Consensus        24 AY-vLsD~~KR~~Y   36 (382)
                      || ||+||++|+.|
T Consensus        85 Ay~~L~d~~~R~~Y   98 (98)
T d1nz6a_          85 AWSEFENQGQKPLY   98 (98)
T ss_dssp             HHHHHHTTTCCCCC
T ss_pred             HHHHHCCHHHHhcC
Confidence            99 99999999998

>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.35  E-value=0.0081  Score=44.85  Aligned_cols=15  Identities=13%  Similarity=-0.057  Sum_probs=12.5

Q ss_pred             CCCcchhhhcCCCCC
Q 016833            9 SDNTKYYEILGVSKK   23 (382)
Q Consensus         9 ~~~~~~Y~iLgv~~~   23 (382)
                      ..-+++|+||+|+++
T Consensus        13 ~~~~~~y~iL~v~~~   27 (88)
T d1iura_          13 SILKEVTSVVEQAWK   27 (88)
T ss_dssp             SCHHHHHHHHHHTTS
T ss_pred             hHHHHHHHHhCCCCC
Confidence            334699999999988

>d1m1qa_ a.138.1.3 (A:) Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain {Shewanella oneidensis [TaxId: 70863]}

class: All alpha proteins
fold: Multiheme cytochromes
superfamily: Multiheme cytochromes
family: Di-heme elbow motif
domain: Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain
species: Shewanella oneidensis [TaxId: 70863]

Probab=81.98  E-value=0.061  Score=39.47  Aligned_cols=43  Identities=23%  Similarity=0.567  Sum_probs=30.6

Q ss_pred             eeeCCCCCCCCccCC-------C---cccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEE
Q 016833          110 NVICTKCKGKGSKSG-------A---SMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGET  165 (382)
Q Consensus       110 ~~~C~~C~G~G~~~~-------~---~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~  165 (382)
                      ...|..|+|++....       .   -..|..|+|.|..             +...|..|++.|.+
T Consensus        31 ~~~C~~CHg~~~~~~~~~~~h~~~~~c~~CH~~H~~~~~-------------~~~~C~~CH~~gr~   83 (90)
T d1m1qa_          31 FAQCQSCHGKLSEMDAVHKPHDGNLVCADCHAVHDMNVG-------------QKPTCESCHDDGRT   83 (90)
T ss_dssp             HHHHHHHHCCGGGSCTTTGGGTTTCCGGGTCCTTTSBTT-------------CCCCSTTTCSSCCC
T ss_pred             CCcCcccCCCceeEeeccccccCccccccCccccCCCCc-------------CCCccccccCCCcc
Confidence            357999999987532       1   1568888887642             25679999999864