Citrus Sinensis ID: 017014

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------38

MACSSLFSPNSLPNFTTRPSRLQISYQPNNLAFSSHQYDTAKKKVFPLASVASIPYQPINVDYLEEEFSGHGVTFEDIDGSCVAKMGFENGSTATLMLPSGLITSYKAHMWHGGTVELLHTIVSEGKDGTPAIQGGLSSAFSCGSDGEVWSPCNWTLHDISGNPQEFIQVELISSDTVDMVEIRCIVTLNEASVSSELVVSNFRSSSLQLAGSIISHLTVSTPEANYAVGLEGSDFFNMSPVSSNFVIIPPENSEQNNFIWSPMRFLSALGARNEKVADAAHSSFSESDEEMQREENDSYKQLKEKMSRIYTSAPTNFTIIDRVIFSKKFSGFLSLLSKSCIFRIHASRILRMHVDESMKANIIVAFSTYCKVKKKKRR

cccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccHHHHHHHHccccEEEEccccEEEEEEEcccccEEEEEEccEEEEEEEEEccccccEEEEEEEccccccccccccccEEEccccccccccccccccEEEEEcccccccEEEEEEcccccccEEEEEEEEEEcccEEEEEEEEEcccccEEHHHHccEEEEEcccccEEEEcccccccccccccccccccccccccccccccccccEEEEccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccEEEHHHHHHHHHHHHHHHHcccEEEEEEEEEEEHHcccccccccEEEEEEEEEEEcccccc

ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccEEEEccccccEEEEEEccccEEEEEccccEEEEccccccccccEEEEEEEcccccccccEEEEEEEccccccccccccccccEEEEEcccccccEEEEEEEEccccccEEEEEEEEEcHHHcEEEEEEEccccccEEEEHHHHHEEEEcccccEEEEccccccccccccccccccEccccHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcEEEcccccccEEEEEEEEHHHHHHHHHHHcHcHHHHEHHHHHHHHHHcHHHHHHEEEEHHHHHHEcccccc

macsslfspnslpnfttrpsrlqisyqpnnlafsshqydtakkkvfplasvasipyqpinvdyleeefsghgvtfedidgscvakmgfengstatlmlpsglitsykahmwhgGTVELLHTIVsegkdgtpaiqgglssafscgsdgevwspcnwtlhdisgnpqEFIQVELissdtvdmVEIRCIVTLNEASVSSELVVSNFRSSSLQLAGSIIShltvstpeanyavglegsdffnmspvssnfviippenseqnnfiwsPMRFLSALGARNEKVAdaahssfsesdeEMQREENDSYKQLKEKMSRIytsaptnftiidRVIFSKKFSGFLSLLSKSCIFRIHASRILRMHVDESMKANIIVAFSTYCKVKKKKRR

macsslfspnslpnfttrpSRLQISYQPNNLAFSSHQYDTAKKKVFPLASVASIPYQPINVDYLEEEFSGHGVTFEDIDGSCVAKMGFENGSTATLMLPSGLITSYKAHMWHGGTVELLHTIVSEGKDGTPAIQGGLSSAFSCGSDGEVWSPCNWTLHDISGNPQEFIQVELISSDTVDMVEIRCIVTLNEASVSSELVVSNFRSSSLQLAGSIISHLTVSTPEANYAVGLEGSDFFNMSPVSSNFVIIPPENSEQNNFIWSPMRFLSALGARNEKVADAAHssfsesdeemqREENDSYKQLKEKMSRiytsaptnftiIDRVIFSKKFSGFLSLLSKSCIFRIHASRILRMHVDESMKANIIVAfstyckvkkkkrr

MACSSLFSPNSLPNFTTRPSRLQISYQPNNLAFSSHQYDTAKKKVFPLASVASIPYQPINVDYLEEEFSGHGVTFEDIDGSCVAKMGFENGSTATLMLPSGLITSYKAHMWHGGTVELLHTIVSEGKDGTPAIQGGLSSAFSCGSDGEVWSPCNWTLHDISGNPQEFIQVELISSDTVDMVEIRCIVTLNEASVSSELVVSNFRSSSLQLAGSIISHLTVSTPEANYAVGLEGSDFFNMSPVSSNFVIIPPENSEQNNFIWSPMRFLSALGARNEKVADAAHSSFSESDEEMQREENDSYKQLKEKMSRIYTSAPTNFTIIDRVIfskkfsgflsllsksCIFRIHASRILRMHVDESMKANIIVAFSTYCKVKKKKRR

******************************LAFSSHQYDTAKKKVFPLASVASIPYQPINVDYLEEEFSGHGVTFEDIDGSCVAKMGFENGSTATLMLPSGLITSYKAHMWHGGTVELLHTIVSEGKDGTPAIQGGLSSAFSCGSDGEVWSPCNWTLHDISGNPQEFIQVELISSDTVDMVEIRCIVTLNEASVSSELVVSNFRSSSLQLAGSIISHLTVSTPEANYAVGLEGSDFFNMSPVSSNFVIIPPENSEQNNFIWSPMRFLSAL***************************************IYTSAPTNFTIIDRVIFSKKFSGFLSLLSKSCIFRIHASRILRMHVDESMKANIIVAFSTYCKV******

**************************QPNNL*******************************YLEEEFSGHGVTFEDIDGSCVAKMGFENGSTATLMLPSGLITSYKAHMWHGGTVELLHTIVSE*****PAIQGGLSS*************************QEFIQVELISSDTVDMVEIRCIVTLNEASVSSELVVSNFRSSSLQLAGSIISHLTVSTPEANYAVGLEGSDFFNMSPV****************FIWSPMRFLSALGA********************QREENDSYKQLKEKMSRIYTSAPTNFTIIDRVIFSKKFSGFLSLLSKSCIFRIHASRILRMHVDESMKANIIVAFSTYCKVKK****

********PNSLPNFTTRPSRLQISYQPNNLAFSSHQYDTAKKKVFPLASVASIPYQPINVDYLEEEFSGHGVTFEDIDGSCVAKMGFENGSTATLMLPSGLITSYKAHMWHGGTVELLHTIVSEGKDGTPAIQGGLSSAFSCGSDGEVWSPCNWTLHDISGNPQEFIQVELISSDTVDMVEIRCIVTLNEASVSSELVVSNFRSSSLQLAGSIISHLTVSTPEANYAVGLEGSDFFNMSPVSSNFVIIPPENSEQNNFIWSPMRFLSALGARN*************************YKQLKEKMSRIYTSAPTNFTIIDRVIFSKKFSGFLSLLSKSCIFRIHASRILRMHVDESMKANIIVAFSTYC********

*********NSLPNFTTRPSRLQISYQPNNLAFSSHQYDTAKKKVFPLASVASIPYQPINVDYLEEEFSGHGVTFEDIDGSCVAKMGFENGSTATLMLPSGLITSYKAHMWHGGTVELLHTIVSEGKDGTPAIQGGLSSAFSCGSDGEVWSPCNWTLHDISGNPQEFIQVELISSDTVDMVEIRCIVTLNEASVSSELVVSNFRSSSLQLAGSIISHLTVSTPEANYAVGLEGSDFFNMSPVSSNFVIIPPENSEQN***WSP********************************ENDSYKQLKEKMSRIYTSAPTNFTIIDRVIFSKKFSGFLSLLSKSCIFRIHASRILRMHVDESMKANIIVAFSTYCKVKK****

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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		379
255568934		387	conserved hypothetical protein [Ricinus	0.839	0.821	0.597	9e-96
224145974		356	predicted protein [Populus trichocarpa]	0.725	0.772	0.579	1e-90
359482119		386	PREDICTED: uncharacterized protein LOC10	0.823	0.808	0.537	4e-85
147768692		754	hypothetical protein VITISV_016184 [Viti	0.746	0.375	0.566	1e-82
357497447		386	hypothetical protein MTR_6g032880 [Medic	0.810	0.795	0.503	6e-81
388504174		386	unknown [Medicago truncatula]	0.810	0.795	0.490	3e-78
388511703		386	unknown [Lotus japonicus]	0.825	0.810	0.503	3e-77
358248472		381	uncharacterized protein LOC100775728 [Gl	0.722	0.719	0.522	2e-72
449459648		374	PREDICTED: uncharacterized protein LOC10	0.699	0.708	0.530	1e-69
297739752		306	unnamed protein product [Vitis vinifera]	0.617	0.764	0.552	8e-64

>gi\|255568934\|ref\|XP_002525437.1\| conserved hypothetical protein [Ricinus communis] gi\|223535250\|gb\|EEF36927.1\| conserved hypothetical protein [Ricinus communis]	Back alignment and taxonomy information

 Score =  356 bits (914), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 196/328 (59%), Positives = 240/328 (73%), Gaps = 10/328 (3%)

Query: 1   MACSSLFS----PNSLPNFTTRPSRLQISYQPNNLAFSSHQYDTAKKKVFPLASVASIPY 56
           MA SSLFS    P S  +  T+      SY P     S    ++ KK+ FPL SVASIPY
Sbjct: 1   MAFSSLFSLTFPPISSSSLNTKHPLFFHSYLP-----SISLQNSNKKREFPLPSVASIPY 55

Query: 57  QPINVDYLEEEFSGHGVTFEDIDGSCVAKMGFENGSTATLMLPSGLITSYKAHMWHGGTV 116
           QPINVDYLE+EFSGHGVTFEDI  SC+AKM  ENGSTATLMLPSGLITSYKAHMWHGG  
Sbjct: 56  QPINVDYLEQEFSGHGVTFEDIGDSCIAKMRLENGSTATLMLPSGLITSYKAHMWHGGRA 115

Query: 117 ELLHTIVSEGKDGTPAIQGGLSSAFSCGSDGEV-WSPCNWTLHDISGNPQEFIQVELISS 175
           ELL T V EGKDG P IQGG+S AF+ GSD E+ WSP +W L  I GNP++ IQVELIS+
Sbjct: 116 ELLQTSVLEGKDGNPVIQGGVSLAFNFGSDNEILWSPTSWALRAIRGNPEDSIQVELIST 175

Query: 176 DTVDMVEIRCIVTLNEASVSSELVVSNFRSSSLQLAGSIISHLTVSTPEANYAVGLEGSD 235
           D  D VE+R +++L E ++SS+LVVSN +SSS++L GS+ISHLTVSTPEA YA GLEGS+
Sbjct: 176 DAEDKVEVRHVLSLTEDTLSSQLVVSNSKSSSIRLMGSLISHLTVSTPEATYAYGLEGSN 235

Query: 236 FFNMSPVSSNFVIIPPENSEQNNFIWSPMRFLSALGARNEKVADAAHSSFSESDEEMQRE 295
           FFN    SSNF I+PP++ +          F SA GAR++K +D       +++EE++ E
Sbjct: 236 FFNRPMFSSNFSIVPPDSQQSWYSDLGLNAFFSAWGARDQKNSDKGKDREVKNEEELEGE 295

Query: 296 ENDSYKQLKEKMSRIYTSAPTNFTIIDR 323
           E+++YKQL +KMSRIYTSAPT+FT+IDR
Sbjct: 296 EDENYKQLTDKMSRIYTSAPTDFTLIDR 323

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|224145974\|ref\|XP_002325833.1\| predicted protein [Populus trichocarpa] gi\|222862708\|gb\|EEF00215.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|359482119\|ref\|XP_002276941.2\| PREDICTED: uncharacterized protein LOC100267590 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|147768692\|emb\|CAN71659.1\| hypothetical protein VITISV_016184 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|357497447\|ref\|XP_003619012.1\| hypothetical protein MTR_6g032880 [Medicago truncatula] gi\|355494027\|gb\|AES75230.1\| hypothetical protein MTR_6g032880 [Medicago truncatula]	Back alignment and taxonomy information

>gi\|388504174\|gb\|AFK40153.1\| unknown [Medicago truncatula]	Back alignment and taxonomy information

>gi\|388511703\|gb\|AFK43913.1\| unknown [Lotus japonicus]	Back alignment and taxonomy information

>gi\|358248472\|ref\|NP_001239887.1\| uncharacterized protein LOC100775728 [Glycine max] gi\|255634755\|gb\|ACU17739.1\| unknown [Glycine max]	Back alignment and taxonomy information

>gi\|449459648\|ref\|XP_004147558.1\| PREDICTED: uncharacterized protein LOC101207678 [Cucumis sativus] gi\|449510452\|ref\|XP_004163668.1\| PREDICTED: uncharacterized protein LOC101230593 [Cucumis sativus]	Back alignment and taxonomy information

>gi\|297739752\|emb\|CBI29934.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		379
TAIR\|locus:2035646		354	NDF5 "NDH-dependent cyclic ele	0.767	0.822	0.379	8.8e-47

TAIR\|locus:2035646 NDF5 "NDH-dependent cyclic electron flow 5" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
 Identities = 115/303 (37%), Positives = 173/303 (57%)

Query:    17 TRPSRLQISYQPNNLAFSSHQ-YDTAKKKVFPLASVASIPYQPINVDYLEEEFSGHGVTF 75
             +R S++ +S    +L    H+     +  V P AS ++ P  PI+V+YL  EFSGHG TF
Sbjct:    17 SRSSKINLSSSFASLPLQFHKNIKRLESSVPPSASASASPAFPIDVEYLRREFSGHGATF 76

Query:    76 EDIDGSCVAKMGFENGSTATLMLPSGLITSYKAHMWHGGTVELLHTIVSEGKDGTPAIQG 135
             EDI  +C+A++  +NGS+A +ML  G+ITSYK  +WHGG VELLHT V + ++    I+G
Sbjct:    77 EDIGETCIARLKLDNGSSANVMLTRGMITSYKVRVWHGGKVELLHTWVEQEEEEV-VIRG 135

Query:   136 GLSSAFSCGSDGEVWSPCNWTLHDISGNPQEFIQVELISSDT-VDMVEIRCIVTLNEASV 194
             G+SSAF      E+    +W L  ISG+ ++ +Q+EL  SD  +  +E++ I++L E ++
Sbjct:   136 GVSSAFRSSDSDEI---SDWRLQGISGDSKDCVQMELRRSDKKIKEIELKQIISLRENTL 192

Query:   195 SSELVVSNFRSSSLQLAG-SIISHLTVSTPEANYAVGLEGSDFFNMSPVSSNFVIIPPEN 253
             S EL ++N   S ++L G S++S+LTVSTPEA YAVGLEGSDF   +P    F ++  E 
Sbjct:   193 SIELSMTNKGISPIKLEGCSLVSYLTVSTPEATYAVGLEGSDFVETTPFLPRFGVVQGEK 252

Query:   254 SEQN-NFIWSPMRFLSALGARNEKVADAAHSSFSESDEEMQREENDSYKQLKEKMSRIYT 312
              E+   F          L     ++   A  SF+  D    R   +S    +E    +Y 
Sbjct:   253 EEEKPGFGGEEESNYKQLNREMSRIYTCAPKSFTVID----RGRRNSVVVGREGFEEVYM 308

Query:   313 SAP 315
              +P
Sbjct:   309 YSP 311


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.130   0.377    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      379       364   0.00083  117 3  11 22  0.41    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  610 (65 KB)
  Total size of DFA:  239 KB (2130 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  34.68u 0.10s 34.78t   Elapsed:  00:00:01
  Total cpu time:  34.68u 0.10s 34.78t   Elapsed:  00:00:01
  Start:  Fri May 10 07:23:44 2013   End:  Fri May 10 07:23:45 2013

GO:0003824 "catalytic activity" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

GO:0009773 "photosynthetic electron transport in photosystem I" evidence=IMP

GO:0010628 "positive regulation of gene expression" evidence=IMP

GO:0016020 "membrane" evidence=IDA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0016556 "mRNA modification" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	gw1.XIX.1033.1	hypothetical protein (254 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		379
KOG1594		305	consensus Uncharacterized enzymes related to aldos	100.0
COG0676		287	Uncharacterized enzymes related to aldose 1-epimer	100.0
cd09020		269	D-hex-6-P-epi_like D-hexose-6-phosphate epimerase-	100.0
cd09025		271	Aldose_epim_Slr1438 Aldose 1-epimerase, similar to	99.96
PF01263		300	Aldose_epim: Aldose 1-epimerase; InterPro: IPR0081	99.85
cd09021		273	Aldose_epim_Ec_YphB aldose 1-epimerase, similar to	99.83
cd01081		284	Aldose_epim aldose 1-epimerase superfamily. Aldose	99.77
cd09024		288	Aldose_epim_lacX Aldose 1-epimerase, similar to La	99.72
cd09022		284	Aldose_epim_Ec_YihR Aldose 1-epimerase, similar to	99.24
PRK15172		300	putative aldose-1-epimerase; Provisional	98.93
COG2017		308	GalM Galactose mutarotase and related enzymes [Car	98.87
cd09019		326	galactose_mutarotase_like galactose mutarotase_lik	98.64
PLN00194		337	aldose 1-epimerase; Provisional	98.62
TIGR02636		335	galM_Leloir galactose mutarotase. Members of this	97.86
PTZ00485		376	aldolase 1-epimerase; Provisional	97.69
PRK11055		342	galM galactose-1-epimerase; Provisional	97.62
cd09023		284	Aldose_epim_Ec_c4013 Aldose 1-epimerase, similar t	97.44
PF14315		274	DUF4380: Domain of unknown function (DUF4380)	94.37
cd09269		293	deoxyribose_mutarotase deoxyribose mutarotase_like	93.83
TIGR03593		366	yidC_nterm membrane protein insertase, YidC/Oxa1 f	84.21

>KOG1594 consensus Uncharacterized enzymes related to aldose 1-epimerase [Carbohydrate transport and metabolism]	Back alignment and domain information

Probab=100.00  E-value=7.6e-62  Score=463.01  Aligned_cols=222  Identities=20%  Similarity=0.245  Sum_probs=196.3

Q ss_pred             ecCCeeeEEEEeCCCCEEEEEcCCeEEEEEeecccCCCcceeEEecCCCCCCCCCCcccceeEEecCCCC------CCCc
Q 017014           77 DIDGSCVAKMGFENGSTATLMLPSGLITSYKAHMWHGGTVELLHTIVSEGKDGTPAIQGGLSSAFSCGSD------GEVW  150 (379)
Q Consensus        77 ~~~gl~~v~L~~~~gssA~I~L~GAhVtSwkp~~w~~g~~elL~lS~~A~~dggkaIRGGVPICfPfg~~------~~FA  150 (379)
                      ..+|++.+.|+.++|++|+|+||||||+|||..    .++|+||+|.+|.|+|+||||||||+|||||++      .|||
T Consensus        19 ~~~g~~~ivL~~p~g~taev~L~Gg~V~SWK~~----~geElLf~S~kA~f~ppKpIRGGIP~~FPQFG~~g~l~qHGFa   94 (305)
T KOG1594|consen   19 GRNGLDKIVLTDPRGSTAEVYLYGGQVVSWKNE----NGEELLFVSTKAIFKPPKPIRGGIPICFPQFGNFGSLPQHGFA   94 (305)
T ss_pred             ccCCCceEEEeCCCCCeEEEEEeccEEEEeecC----CCceeEEechhhhcCCCCcccCCcceEeeccCCCCcccccccc
Confidence            368889999999999999999999999999985    568999999999999999999999999998874      2499


Q ss_pred             CccCcEEeeecC-CC---CccEEEEEeeCCC-----CCceEEEEEEEEeCCceEEEEEEEeCCCCcchhhhhhccceecC
Q 017014          151 SPCNWTLHDISG-NP---QEFIQVELISSDT-----VDMVEIRCIVTLNEASVSSELVVSNFRSSSLQLAGSIISHLTVS  221 (379)
Q Consensus       151 R~~~W~l~~~~~-~~---~~~v~l~L~ls~~-----~~~F~L~~~VtL~~~~L~l~L~V~Ntg~~pf~ft~ALHTYf~Vs  221 (379)
                      ||+.|.+++... .+   +..|++.|+.+++     +|.|+++|+|.|+++.|++++.|+|++++||+|+.||||||+|+
T Consensus        95 Rn~~W~v~~~p~~lp~~~~a~Vdl~Lk~~~~~~kiWp~~Fe~~lrv~l~~g~Lt~~~rV~Ntd~KpFsF~~alHtYf~vs  174 (305)
T KOG1594|consen   95 RNRFWEVENNPPPLPSLGKATVDLILKSSEDDLKIWPHSFELRLRVSLGDGELTLTSRVRNTDSKPFSFSFALHTYFRVS  174 (305)
T ss_pred             cceeeEeccCCCCCCcCCceeEEEEecCChhhhhhCCcceEEEEEEEEcCCceEEEEEeecCCCCceEEEeEeeeeEeec
Confidence            999999987642 11   2355666655543     58999999999999999999999999999999999999999999


Q ss_pred             CCCceEEecCCCCCcccCCCCCCCcccCCCCccccccccCcchhhhcccccccccccccccCCCCcchhhhhccccCcce
Q 017014          222 TPEANYAVGLEGSDFFNMSPVSSNFVIIPPENSEQNNFIWSPMRFLSALGARNEKVADAAHSSFSESDEEMQREENDSYK  301 (379)
Q Consensus       222 Di~~v~V~GLeG~~YlDkl~~~s~f~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~~q~~~~~~~~~~~~~~~~E~~~~~  301 (379)
                      ||++++|+||++++|+|++...+                                                ...|+++++
T Consensus       175 disevrveGL~tldylD~~~~~~------------------------------------------------~~tE~~dav  206 (305)
T KOG1594|consen  175 DISEVRVEGLETLDYLDNLKNRE------------------------------------------------RFTEQRDAV  206 (305)
T ss_pred             ccceEEEeccccccccccccchh------------------------------------------------hccccCceE
Confidence            99999999999999999995322                                                234667789


Q ss_pred             eecCccceEEcCCCCeeEEecCce---eEEEeeCccccCCceEEEccchhhhhhcc
Q 017014          302 QLKEKMSRIYTSAPTNFTIIDRVI---FSKKFSGFLSLLSKSCIFRIHASRILRMH  354 (379)
Q Consensus       302 ~~~~EvDRVY~~aP~~~tIiD~~~---~~~~~~~~~~~~s~~~v~~~~~~~~~~m~  354 (379)
                      +|++||||||+++|..+.|.|..+   |.+++.|+    +|+||||||++|+|+|.
T Consensus       207 TF~~e~DrvYl~tp~e~aI~dh~~krti~l~k~g~----pDaVVWNPW~kksk~ma  258 (305)
T KOG1594|consen  207 TFNSEVDRVYLNTPTELAIFDHEKKRTIVLKKEGL----PDAVVWNPWDKKSKTMA  258 (305)
T ss_pred             eeccceeeEEecCCceEEEEEeccccEEEEeccCC----CceEEeChhHhhhhhhh
Confidence            999999999999999999998843   99999998    99999999999988875

>COG0676 Uncharacterized enzymes related to aldose 1-epimerase [Carbohydrate transport and metabolism]	Back alignment and domain information

>cd09020 D-hex-6-P-epi_like D-hexose-6-phosphate epimerase-like	Back alignment and domain information

>cd09025 Aldose_epim_Slr1438 Aldose 1-epimerase, similar to Synechocystis Slr1438	Back alignment and domain information

>PF01263 Aldose_epim: Aldose 1-epimerase; InterPro: IPR008183 Aldose 1-epimerase (5	Back alignment and domain information

>cd09021 Aldose_epim_Ec_YphB aldose 1-epimerase, similar to Escherichia coli YphB	Back alignment and domain information

>cd01081 Aldose_epim aldose 1-epimerase superfamily	Back alignment and domain information

>cd09024 Aldose_epim_lacX Aldose 1-epimerase, similar to Lactococcus lactis lacX	Back alignment and domain information

>cd09022 Aldose_epim_Ec_YihR Aldose 1-epimerase, similar to Escherichia coli YihR	Back alignment and domain information

>PRK15172 putative aldose-1-epimerase; Provisional	Back alignment and domain information

>COG2017 GalM Galactose mutarotase and related enzymes [Carbohydrate transport and metabolism]	Back alignment and domain information

>cd09019 galactose_mutarotase_like galactose mutarotase_like	Back alignment and domain information

>PLN00194 aldose 1-epimerase; Provisional	Back alignment and domain information

>TIGR02636 galM_Leloir galactose mutarotase	Back alignment and domain information

>PTZ00485 aldolase 1-epimerase; Provisional	Back alignment and domain information

>PRK11055 galM galactose-1-epimerase; Provisional	Back alignment and domain information

>cd09023 Aldose_epim_Ec_c4013 Aldose 1-epimerase, similar to Escherichia coli c4013	Back alignment and domain information

>PF14315 DUF4380: Domain of unknown function (DUF4380)	Back alignment and domain information

>cd09269 deoxyribose_mutarotase deoxyribose mutarotase_like	Back alignment and domain information

>TIGR03593 yidC_nterm membrane protein insertase, YidC/Oxa1 family, N-terminal domain	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		379
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-07

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 50.6 bits (120), Expect = 7e-07
 Identities = 50/421 (11%), Positives = 118/421 (28%), Gaps = 130/421 (30%)

Query: 23  QISYQPNNLAFSSHQYDTAKKKVFPLASVASIPYQPINV----------DYLEEEFSGHG 72
            I  +    +  +  Y   + +++      +  +   NV            L E      
Sbjct: 97  PIKTEQRQPSMMTRMYIEQRDRLYN----DNQVFAKYNVSRLQPYLKLRQALLELRPAKN 152

Query: 73  VTFEDIDG------SCVAKMGFENGSTATLMLPSGLITSYKAHMWHGGTVELLHTIVSEG 126
           V    IDG      + VA     +      M        +K   W           ++  
Sbjct: 153 VL---IDGVLGSGKTWVALDVCLSYKVQCKM-------DFKIF-W-----------LNLK 190

Query: 127 KDGTP----AIQGGLSSAFSCGSDGEVWSPCN--WTLHDISGNPQEFIQVE------LI- 173
              +P     +   L                N    +H I    +  ++ +      L+ 
Sbjct: 191 NCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL 250

Query: 174 ----SSDTVDMVEIRCIVTLNEASVSSELVVSNFRSSSLQLAGSIISHLTVSTPEANYAV 229
               ++   +   + C +          L+ + F+  +  L+ +  +H+++     ++++
Sbjct: 251 LNVQNAKAWNAFNLSCKI----------LLTTRFKQVTDFLSAATTTHISLD----HHSM 296

Query: 230 GL---EGSDFF----NMSPVSSNFVIIPPENSEQNNFIWSPMRFLSALGAR--------- 273
            L   E         +  P       +P E    N     P R LS +            
Sbjct: 297 TLTPDEVKSLLLKYLDCRPQD-----LPREVLTTN-----PRR-LSIIAESIRDGLATWD 345

Query: 274 ------NEKVADAAHSSFSESDEEMQREENDSYKQL---------KEK-MSRIYTSAPTN 317
                  +K+     SS +  +    R+    + +L             +S I+     +
Sbjct: 346 NWKHVNCDKLTTIIESSLNVLEPAEYRK---MFDRLSVFPPSAHIPTILLSLIWFDVIKS 402

Query: 318 FTIIDRVIFSKKFSGFLSLL---SKSCIFRIHA-SRILRMHVDE--SMKANIIVAFSTYC 371
             ++      K      SL+    K     I +    L++ ++   ++  +I+  ++   
Sbjct: 403 DVMVVVNKLHKY-----SLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPK 457

Query: 372 K 372
            
Sbjct: 458 T 458

PyMOL of 1vt4

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		379
1jov_A		270	HI1317; hypothetical protein, structure 2 function	100.0
2hta_A		309	Putative enzyme related to aldose 1-epimerase; car	100.0
2cir_A		297	Hexose-6-phosphate mutarotase; hypothetical protei	99.97
3k25_A		289	SLR1438 protein; structural genomics, PSI-2, prote	99.97
3mwx_A		326	Aldose 1-epimerase; structural genomics, joint cen	99.85
3os7_A		341	Galactose mutarotase-like protein; structural geno	99.84
3nre_A		291	Aldose 1-epimerase; structural genomics, joint cen	99.84
1yga_A		342	Hypothetical 37.9 kDa protein in BIO3-HXT17 interg	99.79
3dcd_A		307	Galactose mutarotase related enzyme; Q5FKD7 LAR33	99.68
3q1n_A		294	Galactose mutarotase related enzyme; structural ge	99.68
1snz_A		344	Aldose 1-epimerase; mutarotase, galactosemia, isom	99.65
1lur_A		339	Aldose 1-epimerase; vitamin B12, methyltransferase	99.24
1nsx_A		347	Galactose mutarotase; epimerase, galactose metabol	98.85
1z45_A		699	GAL10 bifunctional protein; epimerase, mutarotase,	98.85
3imh_A		338	Galactose-1-epimerase; structural genomics, PSI-2,	98.77
3ty1_A		384	Hypothetical aldose 1-epimerase; supersandwich, st	98.26

>1jov_A HI1317; hypothetical protein, structure 2 function project, S2F, structural genomics, unknown function; 1.57A {Haemophilus influenzae} SCOP: b.30.5.7	Back alignment and structure

Probab=100.00  E-value=2.4e-43  Score=334.52  Aligned_cols=222  Identities=14%  Similarity=0.173  Sum_probs=186.7

Q ss_pred             CceEEEecCCeeeEEEEeCCCCEEEEEcCCeEEEEEeecccCCCcceeEEecCCCCCCCCCCcccceeEEecCCCC----
Q 017014           71 HGVTFEDIDGSCVAKMGFENGSTATLMLPSGLITSYKAHMWHGGTVELLHTIVSEGKDGTPAIQGGLSSAFSCGSD----  146 (379)
Q Consensus        71 ~gvtf~~~~gl~~v~L~~~~gssA~I~L~GAhVtSwkp~~w~~g~~elL~lS~~A~~dggkaIRGGVPICfPfg~~----  146 (379)
                      ..+++...+|.+.+.|++.+ .+|+|+++||+|+||+++   +++.|+||+|+.+.+++++|||||||||||++++    
T Consensus        11 ~~~~~~~~~~~~~~~l~~~~-~~a~i~~~Ga~l~s~~~~---~~g~e~Lw~~~~~~~~~~~~irGGiPvlfP~~gr~~~~   86 (270)
T 1jov_A           11 PELHLVQHNDIPVLHLKHAV-GTAKISLQGAQLISWKPQ---NAKQDVLWLSEVEPFKNGNAIRGGVPICYPWFGGVKQP   86 (270)
T ss_dssp             TTEEEEEETTEEEEEEEETT-EEEEEETBTTEEEEEEET---TCSSCSBCBCTTCCCCTTSCCSBSCCEEBSSCGGGSSS
T ss_pred             CceEEeeeCCceEEEEeCCC-cEEEEECCCCEEEEEEEC---CCCceEEEECcHHhcCCCCCccCccEEEEeccCCCCCC
Confidence            46788777898888888744 589999999999999986   3568999999999999999999999999997662    


Q ss_pred             -CCCcCccCcEEeeecCCCCccEEEEEeeCCCCCceEEEEEEEEeCCceEEEEEEEeCCCCcchhhhhhccceecCCCCc
Q 017014          147 -GEVWSPCNWTLHDISGNPQEFIQVELISSDTVDMVEIRCIVTLNEASVSSELVVSNFRSSSLQLAGSIISHLTVSTPEA  225 (379)
Q Consensus       147 -~~FAR~~~W~l~~~~~~~~~~v~l~L~ls~~~~~F~L~~~VtL~~~~L~l~L~V~Ntg~~pf~ft~ALHTYf~VsDi~~  225 (379)
                       .||||++.|+|.+...+ ++.++|+|.+.++++.|+|+++++|+   |+++++|+|+|++||  +.++|+||+|+|+++
T Consensus        87 ~HGfaR~~~W~v~~~~~~-~~~v~l~~~l~~~~~~f~l~~~~~L~---l~~~~~v~N~g~~p~--~~g~HpyF~v~d~~~  160 (270)
T 1jov_A           87 AHGTARIRLWQLSHYYIS-VHKVRLEFELFSDLNIIEAKVSMVFT---DKCHLTFTHYGEESA--QAALHTYFNIGDINQ  160 (270)
T ss_dssp             TTBSGGGSBCEEEEEEEE-TTEEEEEEEEECTTSCEEEEEEEEES---SSEEEEEEECCSSCE--EEEECCEEECSCGGG
T ss_pred             CCceecCCCcEEeeeccC-CCcEEEEEEECCCccccEEEEEEEEC---CeEEEEEEeCCchhH--hhhcccceecCCcce
Confidence             36999999999887632 35688888888877889999999994   899999999999874  799999999999999


Q ss_pred             eEEecCCCCCcccCCCCCCCcccCCCCccccccccCcchhhhcccccccccccccccCCCCcchhhhhccccCcceeecC
Q 017014          226 NYAVGLEGSDFFNMSPVSSNFVIIPPENSEQNNFIWSPMRFLSALGARNEKVADAAHSSFSESDEEMQREENDSYKQLKE  305 (379)
Q Consensus       226 v~V~GLeG~~YlDkl~~~s~f~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~~q~~~~~~~~~~~~~~~~E~~~~~~~~~  305 (379)
                      ++|.||++ .|+|+++.                            +.                     ..+ ...+.|++
T Consensus       161 ~~v~g~~~-~~~d~l~~----------------------------~~---------------------~~~-~~~~~~~~  189 (270)
T 1jov_A          161 VEVQGLPE-TCFNSLNQ----------------------------QQ---------------------ENV-PSPRHISE  189 (270)
T ss_dssp             EEEESCCS-EEEETTTT----------------------------EE---------------------EEC-CSSBCCSS
T ss_pred             EEEECCCC-cceeccCC----------------------------cc---------------------ccc-CCcccCCC
Confidence            99999955 89998841                            00                     001 12488999


Q ss_pred             ccceEEcCCCCeeEEecCc---eeEEEeeCccccCCceEEEccchhhhhhccccc
Q 017014          306 KMSRIYTSAPTNFTIIDRV---IFSKKFSGFLSLLSKSCIFRIHASRILRMHVDE  357 (379)
Q Consensus       306 EvDRVY~~aP~~~tIiD~~---~~~~~~~~~~~~~s~~~v~~~~~~~~~~m~~~~  357 (379)
                      |+||||.+.+..++|.|++   ++.++++|+    ++.||||||++++.+|.-|+
T Consensus       190 ~~D~vy~~~~~~~~i~d~~~~~~i~v~~~~~----~~~vvWnP~~~~~~d~~~~~  240 (270)
T 1jov_A          190 NVDCIYSAENMQNQILDKSFNRTIALHHHNA----SQFVLWNPWHKKTSGMSETG  240 (270)
T ss_dssp             CEEEEEECSSSEEEEEETTTTEEEEEEEESC----SEEEEEECTTSCCTTCCTTG
T ss_pred             CccceeCCCCCCEEEEECCCCcEEEEEEcCC----CeEEEECCCccccccccccc
Confidence            9999999999999999874   488999997    99999999998888987543

PyMOL of 1jov

>2hta_A Putative enzyme related to aldose 1-epimerase; carbohydrate, MU YEAD, GALM, sugar phosphate, isomerase; 1.90A {Salmonella typhimurium} PDB: 2htb_A	Back alignment and structure

>2cir_A Hexose-6-phosphate mutarotase; hypothetical protein, isomerase; HET: BG6; 1.60A {Saccharomyces cerevisiae} PDB: 2ciq_A* 2cis_A*	Back alignment and structure

>3k25_A SLR1438 protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, SGR112, P73504_SYNY3; 2.55A {Synechocystis SP}	Back alignment and structure

>3mwx_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.45A {Bacillus subtilis}	Back alignment and structure

>3os7_A Galactose mutarotase-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: PG4 TLA; 1.80A {Clostridium acetobutylicum}	Back alignment and structure

>3nre_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.59A {Escherichia coli}	Back alignment and structure

>1yga_A Hypothetical 37.9 kDa protein in BIO3-HXT17 intergenic region; aldose_1_epimerase, sugar metabolism, predicted, structural genomics; 2.00A {Saccharomyces cerevisiae}	Back alignment and structure

>3dcd_A Galactose mutarotase related enzyme; Q5FKD7 LAR33 NESG X-RAY, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Lactobacillus acidophilus}	Back alignment and structure

>3q1n_A Galactose mutarotase related enzyme; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.61A {Lactobacillus casei}	Back alignment and structure

>1snz_A Aldose 1-epimerase; mutarotase, galactosemia, isomerase; 2.20A {Homo sapiens} SCOP: b.30.5.4 PDB: 1so0_A*	Back alignment and structure

>1lur_A Aldose 1-epimerase; vitamin B12, methyltransferase, structural genomics, structure-based function assignment, decarboxylase, PSI; 1.85A {Caenorhabditis elegans} SCOP: b.30.5.4	Back alignment and structure

>1nsx_A Galactose mutarotase; epimerase, galactose metabolism, isomerase; HET: GAL; 1.75A {Lactococcus lactis} SCOP: b.30.5.4 PDB: 1nsz_A* 1mmu_A* 1l7k_A* 1l7j_A* 1mmx_A* 1mmy_A* 1mmz_A* 1mn0_A* 1ns0_A* 1ns4_A* 1ns8_A* 1nsr_A* 1nsu_A* 1nsv_A* 1ns7_A* 1ns2_A* 1nsm_A* 1nss_A*	Back alignment and structure

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2	Back alignment and structure

>3imh_A Galactose-1-epimerase; structural genomics, PSI-2, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.76A {Lactobacillus acidophilus}	Back alignment and structure

>3ty1_A Hypothetical aldose 1-epimerase; supersandwich, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.90A {Klebsiella pneumoniae subsp}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		379
d1jova_		269	Hypothetical protein HI1317 {Haemophilus influenza	100.0
d1lura_		329	Aldose 1-epimerase homologue {Nematode (Caenorhabd	97.55
d1nsza_		340	Galactose mutarotase {Lactococcus lactis [TaxId: 1	97.51
d1so0a_		344	Galactose mutarotase {Human (Homo sapiens) [TaxId:	97.48
d1z45a1		342	Galactose mutarotase {Baker's yeast (Saccharomyces	97.4

>d1jova_ b.30.5.7 (A:) Hypothetical protein HI1317 {Haemophilus influenzae [TaxId: 727]}	Back information, alignment and structure

class: All beta proteins
fold: Supersandwich
superfamily: Galactose mutarotase-like
family: Hypothetical protein HI1317
domain: Hypothetical protein HI1317
species: Haemophilus influenzae [TaxId: 727]

Probab=100.00  E-value=5.9e-47  Score=355.63  Aligned_cols=222  Identities=12%  Similarity=0.141  Sum_probs=183.2

Q ss_pred             CceEEEecCCeeeEEEEeCCCCEEEEEcCCeEEEEEeecccCCCcceeEEecCCCCCCCCCCcccceeEEecCCCC----
Q 017014           71 HGVTFEDIDGSCVAKMGFENGSTATLMLPSGLITSYKAHMWHGGTVELLHTIVSEGKDGTPAIQGGLSSAFSCGSD----  146 (379)
Q Consensus        71 ~gvtf~~~~gl~~v~L~~~~gssA~I~L~GAhVtSwkp~~w~~g~~elL~lS~~A~~dggkaIRGGVPICfPfg~~----  146 (379)
                      +.|++.+.++++.++|+++ .++|+|+||||||+||+++   ++++|+||+|+.+.|++++|||||||||||+|++    
T Consensus        11 ~~~~~~~~~~l~~i~i~~~-~~~a~i~~~Ga~l~s~~~~---~~~~e~Lw~s~~a~~~~~~~IRGGiPi~fP~fG~~~~p   86 (269)
T d1jova_          11 PELHLVQHNDIPVLHLKHA-VGTAKISLQGAQLISWKPQ---NAKQDVLWLSEVEPFKNGNAIRGGVPICYPWFGGVKQP   86 (269)
T ss_dssp             TTEEEEEETTEEEEEEEET-TEEEEEETBTTEEEEEEET---TCSSCSBCBCTTCCCCTTSCCSBSCCEEBSSCGGGSSS
T ss_pred             CeEEeeccCCccEEEEeCC-CEEEEEECCCCEEEEEEEC---CCCceEEEeCChhhccCCCcccCCcceeCcccCCCCCC
Confidence            3788888899888888874 4689999999999999997   4668999999999999999999999999996652    


Q ss_pred             -CCCcCccCcEEeeecCCCCccEEEEEeeCCCCCceEEEEEEEEeCCceEEEEEEEeCCCCcchhhhhhccceecCCCCc
Q 017014          147 -GEVWSPCNWTLHDISGNPQEFIQVELISSDTVDMVEIRCIVTLNEASVSSELVVSNFRSSSLQLAGSIISHLTVSTPEA  225 (379)
Q Consensus       147 -~~FAR~~~W~l~~~~~~~~~~v~l~L~ls~~~~~F~L~~~VtL~~~~L~l~L~V~Ntg~~pf~ft~ALHTYf~VsDi~~  225 (379)
                       .||||++.|+|.+...+ ...+++++.+...++.|+++++++|+   |+  ++++|++..++.|+.++|+||+|+|+++
T Consensus        87 ~HGFAR~~~w~l~~~~~~-~~~~~l~~~l~~~~~~f~~~~~~~lt---l~--~~l~n~~~~~~pf~~g~HpyF~v~d~~~  160 (269)
T d1jova_          87 AHGTARIRLWQLSHYYIS-VHKVRLEFELFSDLNIIEAKVSMVFT---DK--CHLTFTHYGEESAQAALHTYFNIGDINQ  160 (269)
T ss_dssp             TTBSGGGSBCEEEEEEEE-TTEEEEEEEEECTTSCEEEEEEEEES---SS--EEEEEEECCSSCEEEEECCEEECSCGGG
T ss_pred             CCccccccceEEEEEecC-CceEEEEEEeccCCCcceEEEEEEec---cE--EEEEEccCCCccceecccceEecCCccc
Confidence             25999999999887653 35778888887777888888888763   44  4455566667788899999999999999


Q ss_pred             eEEecCCCCCcccCCCCCCCcccCCCCccccccccCcchhhhcccccccccccccccCCCCcchhhhhccccCcceeecC
Q 017014          226 NYAVGLEGSDFFNMSPVSSNFVIIPPENSEQNNFIWSPMRFLSALGARNEKVADAAHSSFSESDEEMQREENDSYKQLKE  305 (379)
Q Consensus       226 v~V~GLeG~~YlDkl~~~s~f~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~~q~~~~~~~~~~~~~~~~E~~~~~~~~~  305 (379)
                      +.+.||+++.|.|+...                                                  ...+.+ .+.|.+
T Consensus       161 ~~v~gl~~~~~~~~~~~--------------------------------------------------~~~~~~-~~~~~~  189 (269)
T d1jova_         161 VEVQGLPETCFNSLNQQ--------------------------------------------------QENVPS-PRHISE  189 (269)
T ss_dssp             EEEESCCSEEEETTTTE--------------------------------------------------EEECCS-SBCCSS
T ss_pred             eEEecCCcccccccccc--------------------------------------------------ccccCC-CcccCc
Confidence            99999999988766520                                                  011122 378999


Q ss_pred             ccceEEcCCCCeeEEecCc---eeEEEeeCccccCCceEEEccchhhhhhccccc
Q 017014          306 KMSRIYTSAPTNFTIIDRV---IFSKKFSGFLSLLSKSCIFRIHASRILRMHVDE  357 (379)
Q Consensus       306 EvDRVY~~aP~~~tIiD~~---~~~~~~~~~~~~~s~~~v~~~~~~~~~~m~~~~  357 (379)
                      |+||||.+.+..++|.|.+   ++.++++||    .+.||||||.+++++|--|.
T Consensus       190 ~~D~i~~~~~~~~~i~d~~~~~~i~v~~~g~----~~~vVWnP~~~~a~~~~d~~  240 (269)
T d1jova_         190 NVDCIYSAENMQNQILDKSFNRTIALHHHNA----SQFVLWNPWHKKTSGMSETG  240 (269)
T ss_dssp             CEEEEEECSSSEEEEEETTTTEEEEEEEESC----SEEEEEECTTSCCTTCCTTG
T ss_pred             CeeEEecCCCCcEEEEeCCCCCEEEEEEeCC----CcEEEECCccchhccccccC
Confidence            9999999999999999863   588899998    99999999999999996443

PyMOL of d1jova_

>d1lura_ b.30.5.4 (A:) Aldose 1-epimerase homologue {Nematode (Caenorhabditis elegans) [TaxId: 6239]}	Back information, alignment and structure

>d1nsza_ b.30.5.4 (A:) Galactose mutarotase {Lactococcus lactis [TaxId: 1358]}	Back information, alignment and structure

>d1so0a_ b.30.5.4 (A:) Galactose mutarotase {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1z45a1 b.30.5.4 (A:358-699) Galactose mutarotase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure