Citrus Sinensis ID: 017101

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------
MKGISLSPSNHCQLKFQNILAKQLNKPINTIPFHFTITNRQFPAHVIKCQCQRRDQNPVPKNPINTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKSVLNLLQYA
ccccccccccccccHHHHHHHHHcccccccccccEEEcccccccccHHcccccccccccccccccccccEEEEccccccEEcccccccccccEEEEccEEcccccHHHHHHHHHHHccccEEEEEccccccHHHHHHHHHHHcccccccEEEEEccccccEEEEEEEcccccEEEEEEccccccccHHHHcHHHHHHHccccEEEEcccccHHHHHHHHHHHHHccccEEEEcccccccccHHHHHcccEEcccHHHHHHHHccccccHHHHHHHHHHHHHccccEEEEEcccccEEEEEcccccEEEcccccccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHcc
ccEEEcccccccccHHHHccccccccccccccEEEEccccccccccccHHHHHHcccccccccccccccEEEEEEcccEEEEEcccccccccEEEccccEEccccccHHHHHHHHHccccEEEEEEEcccHHHHHHHHHHHHccccccEEEEEEccccccEEEEEEEccccccEEEEEccccccccHHHHHHHHHHHHHHccEEEEEEcccHHHHHHHHHHHHHcccEEEEccccccccccHHHHccccEEccEHHHHHHHHccccccHHHHHHHHHHHHHccccEEEEEcHHHcEEEEEccEcEEEEEcccEEcccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccccHHHcccHHHHHHHHHcc
mkgislspsnhcqLKFQNILAKQlnkpintipfhftitnrqfpahvikcqcqrrdqnpvpknpintppplvvvgsanfDIYVEIDRLPKVGETVAAktsqtlaggkganqaacgaklshptyfvgqvgedangkLITDALsgcgvrldymnvvkdggvptGHAVVMLQsdgqnsiiivggtnmscwpekfgdeDLEVVKKAGIVLLQREIPDSVNIQVAKAArsagvpvifdaggmdapipqELLNFIdilspneselgrltgmptdsyEQISEAVVKCHKMGVQQVLVKLGAKGSalfvegekpikqsiipaarvidttgagdtftASFAVGFVEGKSREECLRFAAAAASLCVQvkgaipsmpdrkSVLNLLQYA
mkgislspsnhCQLKFQNILAKQLNKPINTIPFHFTITNRQFPAHVIKCQCQRRDQnpvpknpintppplVVVGSANFDIYVEIDRLPKVGETVAAKtsqtlaggkgANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLlqreipdsvNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEgekpikqsiiPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKgaipsmpdrksvlnllqya
MKGISLSPSNHCQLKFQNILAKQLNKPINTIPFHFTITNRQFPAHVIKCQCQRRDQnpvpknpintpppLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKSVLNLLQYA
***********CQLKFQNILAKQLNKPINTIPFHFTITNRQFPAHVIKCQCQR**************PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDILSP*******LT***TDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAI****************
***********CQLKFQNIL*********TI***************************************VVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKSVLNLLQ**
********SNHCQLKFQNILAKQLNKPINTIPFHFTITNRQFPAHVIKCQCQRRDQNPVPKNPINTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQ***********ACGAKLSHPTYFVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKSVLNLLQYA
*KGISLSPSNHCQLKFQNILAKQLNKPINTIPFHFTITNRQFPAHVIKCQCQRRDQNPVPKNPINTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKSVLNLLQYA
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKGISLSPSNHCQLKFQNILAKQLNKPINTIPFHFTITNRQFPAHVIKCQCQRRDQNPVPKNPINTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKSVLNLLQYA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query377 2.2.26 [Sep-21-2011]
P36945293 Ribokinase OS=Bacillus su yes no 0.761 0.979 0.387 1e-41
P44331306 Ribokinase OS=Haemophilus yes no 0.793 0.977 0.337 1e-37
Q9CF42300 Ribokinase OS=Lactococcus yes no 0.724 0.91 0.355 1e-33
P25332333 Probable ribokinase OS=Sa yes no 0.782 0.885 0.318 2e-32
P0A9J6309 Ribokinase OS=Escherichia N/A no 0.769 0.938 0.336 6e-30
P0A9J7309 Ribokinase OS=Escherichia N/A no 0.769 0.938 0.336 6e-30
Q9H477322 Ribokinase OS=Homo sapien yes no 0.769 0.900 0.306 5e-29
Q8R1Q9323 Ribokinase OS=Mus musculu yes no 0.769 0.897 0.297 4e-27
Q54UQ4318 Probable ribokinase OS=Di yes no 0.766 0.908 0.270 1e-26
Q9K6K1294 Ribokinase OS=Bacillus ha yes no 0.748 0.959 0.338 2e-26
>sp|P36945|RBSK_BACSU Ribokinase OS=Bacillus subtilis (strain 168) GN=rbsK PE=3 SV=2 Back     alignment and function desciption
 Score =  170 bits (431), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 119/307 (38%), Positives = 162/307 (52%), Gaps = 20/307 (6%)

Query: 70  LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
           + V+GS + D+ V  D+ PK GETV   + QT+ GGKGANQA   A+L    + VG+VG+
Sbjct: 4   ICVIGSCSMDLVVTSDKRPKAGETVLGTSFQTVPGGKGANQAVAAARLGAQVFMVGKVGD 63

Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
           D  G  I + L   GVR DYM  V      T H V+   ++G NSI++V G N    P  
Sbjct: 64  DHYGTAILNNLKANGVRTDYMEPVTHTESGTAHIVL---AEGDNSIVVVKGANDDITP-A 119

Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
           +    LE ++K  +VL+Q+EIP+    +V K   S  +P+I +      P+ QE ++   
Sbjct: 120 YALNALEQIEKVDMVLIQQEIPEETVDEVCKYCHSHDIPIILNPAPAR-PLKQETIDHAT 178

Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
            L+PNE E   L    T     ISEA+     +   ++ +  G +G    V      K+ 
Sbjct: 179 YLTPNEHEASILFPELT-----ISEALA----LYPAKLFITEGKQG----VRYSAGSKEV 225

Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
           +IP+  V  +DTTGAGDTF A+FAV   EGK  E  LRFA  AASL V   GA   MP R
Sbjct: 226 LIPSFPVEPVDTTGAGDTFNAAFAVALAEGKDIEAALRFANRAASLSVCSFGAQGGMPTR 285

Query: 368 KSVLNLL 374
             V  LL
Sbjct: 286 NEVEELL 292

Bacillus subtilis (strain 168) (taxid: 224308)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 1EC: 5
>sp|P44331|RBSK_HAEIN Ribokinase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=rbsK PE=3 SV=1 Back     alignment and function description
>sp|Q9CF42|RBSK_LACLA Ribokinase OS=Lactococcus lactis subsp. lactis (strain IL1403) GN=rbsK PE=3 SV=1 Back     alignment and function description
>sp|P25332|RBSK_YEAST Probable ribokinase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RBK1 PE=1 SV=2 Back     alignment and function description
>sp|P0A9J6|RBSK_ECOLI Ribokinase OS=Escherichia coli (strain K12) GN=rbsK PE=1 SV=1 Back     alignment and function description
>sp|P0A9J7|RBSK_ECO57 Ribokinase OS=Escherichia coli O157:H7 GN=rbsK PE=3 SV=1 Back     alignment and function description
>sp|Q9H477|RBSK_HUMAN Ribokinase OS=Homo sapiens GN=RBKS PE=1 SV=1 Back     alignment and function description
>sp|Q8R1Q9|RBSK_MOUSE Ribokinase OS=Mus musculus GN=Rbks PE=1 SV=1 Back     alignment and function description
>sp|Q54UQ4|RBSK_DICDI Probable ribokinase OS=Dictyostelium discoideum GN=rbsk PE=3 SV=2 Back     alignment and function description
>sp|Q9K6K1|RBSK_BACHD Ribokinase OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=rbsK PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query377
224117100376 predicted protein [Populus trichocarpa] 0.970 0.973 0.733 1e-151
255577273389 ribokinase, putative [Ricinus communis] 0.962 0.933 0.705 1e-146
15220039379 ribokinase [Arabidopsis thaliana] gi|119 0.846 0.841 0.762 1e-140
5734752378 Similar to ribokinase [Arabidopsis thali 0.846 0.843 0.762 1e-140
297850114380 pfkB-type carbohydrate kinase family pro 0.968 0.960 0.686 1e-139
225461828371 PREDICTED: ribokinase [Vitis vinifera] 0.949 0.964 0.676 1e-139
147833687370 hypothetical protein VITISV_007599 [Viti 0.872 0.889 0.733 1e-139
388498018360 unknown [Medicago truncatula] 0.931 0.975 0.686 1e-135
449438937370 PREDICTED: ribokinase-like [Cucumis sati 0.848 0.864 0.718 1e-133
449483140370 PREDICTED: LOW QUALITY PROTEIN: ribokina 0.848 0.864 0.718 1e-133
>gi|224117100|ref|XP_002317476.1| predicted protein [Populus trichocarpa] gi|222860541|gb|EEE98088.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  542 bits (1396), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 281/383 (73%), Positives = 310/383 (80%), Gaps = 17/383 (4%)

Query: 1   MKGISLSPSNHCQLKFQNILAKQLNKPINTIPFHFTITNRQ--------FPAHVIKCQCQ 52
           MK +S SP+NHC LK Q    KQ   P    P HF     Q        FP+  IK    
Sbjct: 1   MKAVSFSPANHCNLKLQKYPIKQ---PTLANPIHFNNHQNQKPSNKKHHFPSFSIKAS-- 55

Query: 53  RRDQNPVPKNPINTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAA 112
           +  Q P+ K P NTPP LVVVGSAN DIYVEIDRLP  GET++AKT QTLAGGKGANQAA
Sbjct: 56  KTPQTPLTKYP-NTPP-LVVVGSANADIYVEIDRLPAEGETISAKTGQTLAGGKGANQAA 113

Query: 113 CGAKLSHPTYFVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQ 172
           CGAKLS+PTYFVGQVGEDA+GKLIT+AL   GV LD +  + D  VPTGHAVVMLQ DGQ
Sbjct: 114 CGAKLSYPTYFVGQVGEDAHGKLITEALKNGGVNLDCVRNLSD--VPTGHAVVMLQPDGQ 171

Query: 173 NSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFD 232
           NSIIIVGG NMSCWPEK  DEDLEVV+KAG+VLLQREIPD VNIQVAKAA+SAGVPVI D
Sbjct: 172 NSIIIVGGANMSCWPEKLSDEDLEVVRKAGVVLLQREIPDLVNIQVAKAAKSAGVPVILD 231

Query: 233 AGGMDAPIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLG 292
           AGGMDAP+P ELLN +DI SPNESEL RLT M T+S+EQI +AVVKCHKMGV+QVLVKLG
Sbjct: 232 AGGMDAPMPPELLNVVDIFSPNESELARLTCMSTESFEQIGQAVVKCHKMGVKQVLVKLG 291

Query: 293 AKGSALFVEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAAS 352
           AKGSALF+EGEKPIKQ+II AARV+DTTGAGDTFTA+FAV  VEGK++EEC+RFAAAAAS
Sbjct: 292 AKGSALFIEGEKPIKQTIISAARVLDTTGAGDTFTAAFAVALVEGKTKEECMRFAAAAAS 351

Query: 353 LCVQVKGAIPSMPDRKSVLNLLQ 375
           LCVQVKGAIPSMPDR SVL+LLQ
Sbjct: 352 LCVQVKGAIPSMPDRTSVLHLLQ 374

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255577273|ref|XP_002529518.1| ribokinase, putative [Ricinus communis] gi|223531002|gb|EEF32856.1| ribokinase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|15220039|ref|NP_173159.1| ribokinase [Arabidopsis thaliana] gi|119360041|gb|ABL66749.1| At1g17160 [Arabidopsis thaliana] gi|332191431|gb|AEE29552.1| ribokinase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|5734752|gb|AAD50017.1|AC007651_12 Similar to ribokinase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297850114|ref|XP_002892938.1| pfkB-type carbohydrate kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297338780|gb|EFH69197.1| pfkB-type carbohydrate kinase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|225461828|ref|XP_002283733.1| PREDICTED: ribokinase [Vitis vinifera] Back     alignment and taxonomy information
>gi|147833687|emb|CAN73058.1| hypothetical protein VITISV_007599 [Vitis vinifera] Back     alignment and taxonomy information
>gi|388498018|gb|AFK37075.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|449438937|ref|XP_004137244.1| PREDICTED: ribokinase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449483140|ref|XP_004156504.1| PREDICTED: LOW QUALITY PROTEIN: ribokinase-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query377
TAIR|locus:2020337379 AT1G17160 [Arabidopsis thalian 0.811 0.807 0.780 1.4e-126
UNIPROTKB|P0A9J6309 rbsK "ribokinase" [Escherichia 0.774 0.944 0.338 1e-36
SGD|S000000632333 RBK1 "Putative ribokinase" [Sa 0.490 0.555 0.345 2.2e-36
UNIPROTKB|Q9KN34306 VC_A0131 "Ribokinase" [Vibrio 0.777 0.957 0.323 6.5e-35
TIGR_CMR|VC_A0131306 VC_A0131 "ribokinase" [Vibrio 0.777 0.957 0.323 6.5e-35
TIGR_CMR|SO_0810303 SO_0810 "ribokinase" [Shewanel 0.769 0.957 0.320 8.5e-33
UNIPROTKB|E1BJH7325 RBKS "Uncharacterized protein" 0.782 0.907 0.319 1.8e-32
UNIPROTKB|Q9H477322 RBKS "Ribokinase" [Homo sapien 0.790 0.925 0.310 4.7e-32
WB|WBGene00008548314 F07A11.5 [Caenorhabditis elega 0.761 0.914 0.313 1.6e-31
UNIPROTKB|F1N8A7309 RBKS "Uncharacterized protein" 0.742 0.906 0.328 5.4e-31
TAIR|locus:2020337 AT1G17160 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1243 (442.6 bits), Expect = 1.4e-126, P = 1.4e-126
 Identities = 242/310 (78%), Positives = 275/310 (88%)

Query:    70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
             LVVVGSAN DIYVEI+RLPK GET++AKT QTLAGGKGANQAACGAKL +PTYFVG++GE
Sbjct:    71 LVVVGSANADIYVEIERLPKEGETISAKTGQTLAGGKGANQAACGAKLMYPTYFVGRLGE 130

Query:   130 DANGKLITDALS--GCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP 187
             DA+GKLI +AL   GCGV LDY+  V +   PTGHAVVMLQSDGQNSIIIVGG NM  WP
Sbjct:   131 DAHGKLIAEALGDDGCGVHLDYVRSVNNE--PTGHAVVMLQSDGQNSIIIVGGANMKAWP 188

Query:   188 EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNF 247
             E   D+DLE+V+ AGIVLLQREIPDS+NIQVAKA + AGVPVI D GGMD PIP ELL+ 
Sbjct:   189 EIMSDDDLEIVRNAGIVLLQREIPDSINIQVAKAVKKAGVPVILDVGGMDTPIPNELLDS 248

Query:   248 IDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIK 307
             IDILSPNE+EL RLTGMPT+++EQIS+AV KCHK+GV+QVLVKLG+KGSALF++GEKPI+
Sbjct:   249 IDILSPNETELSRLTGMPTETFEQISQAVAKCHKLGVKQVLVKLGSKGSALFIQGEKPIQ 308

Query:   308 QSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
             QSIIPAA+V+DTTGAGDTFTA+FAV  VEGKS EECLRFAAAAASLCVQVKGAIPSMPDR
Sbjct:   309 QSIIPAAQVVDTTGAGDTFTAAFAVAMVEGKSHEECLRFAAAAASLCVQVKGAIPSMPDR 368

Query:   368 KSVLNLLQYA 377
             KSVL LL+++
Sbjct:   369 KSVLKLLKFS 378
GO:0004747 "ribokinase activity" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0006014 "D-ribose metabolic process" evidence=IEA
GO:0016301 "kinase activity" evidence=ISS
GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=IEA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0009507 "chloroplast" evidence=IDA
UNIPROTKB|P0A9J6 rbsK "ribokinase" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
SGD|S000000632 RBK1 "Putative ribokinase" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KN34 VC_A0131 "Ribokinase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_A0131 VC_A0131 "ribokinase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms
TIGR_CMR|SO_0810 SO_0810 "ribokinase" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
UNIPROTKB|E1BJH7 RBKS "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q9H477 RBKS "Ribokinase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
WB|WBGene00008548 F07A11.5 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|F1N8A7 RBKS "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.7.1.92LOW CONFIDENCE prediction!
4th Layer2.7.1.150.824
3rd Layer2.7.10.766
4th Layer2.7.1.45LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query377
cd01174292 cd01174, ribokinase, Ribokinase catalyses the phos 1e-111
TIGR02152293 TIGR02152, D_ribokin_bact, ribokinase 7e-92
COG0524311 COG0524, RbsK, Sugar kinases, ribokinase family [C 2e-73
pfam00294298 pfam00294, PfkB, pfkB family carbohydrate kinase 3e-63
PRK11142306 PRK11142, PRK11142, ribokinase; Provisional 1e-57
PTZ00292326 PTZ00292, PTZ00292, ribokinase; Provisional 4e-55
cd01942279 cd01942, ribokinase_group_A, Ribokinase-like subgr 1e-42
cd01166294 cd01166, KdgK, 2-keto-3-deoxygluconate kinase (Kdg 5e-41
cd01941288 cd01941, YeiC_kinase_like, YeiC-like sugar kinase 2e-34
cd01164289 cd01164, FruK_PfkB_like, 1-phosphofructokinase (Fr 2e-34
cd01168312 cd01168, adenosine_kinase, Adenosine kinase (AK) c 3e-34
TIGR03168303 TIGR03168, 1-PFK, hexose kinase, 1-phosphofructoki 6e-34
cd01945284 cd01945, ribokinase_group_B, Ribokinase-like subgr 1e-33
cd01167295 cd01167, bac_FRK, Fructokinases (FRKs) mainly from 1e-32
COG1105310 COG1105, FruK, Fructose-1-phosphate kinase and rel 1e-30
TIGR03828304 TIGR03828, pfkB, 1-phosphofructokinase 1e-30
cd01172304 cd01172, RfaE_like, RfaE encodes a bifunctional AD 9e-24
cd00287196 cd00287, ribokinase_pfkB_like, ribokinase/pfkB sup 3e-21
PLN02323330 PLN02323, PLN02323, probable fructokinase 1e-20
cd01947265 cd01947, Guanosine_kinase_like, Guanosine kinase-l 7e-20
cd01944289 cd01944, YegV_kinase_like, YegV-like sugar kinase 3e-19
cd01940264 cd01940, Fructoselysine_kinase_like, Fructoselysin 4e-19
TIGR02198315 TIGR02198, rfaE_dom_I, rfaE bifunctional protein, 4e-19
COG2870 467 COG2870, RfaE, ADP-heptose synthase, bifunctional 2e-14
PRK09813260 PRK09813, PRK09813, fructoselysine 6-kinase; Provi 2e-14
PRK09954362 PRK09954, PRK09954, putative kinase; Provisional 2e-12
PTZ00247345 PTZ00247, PTZ00247, adenosine kinase; Provisional 2e-12
PLN02341470 PLN02341, PLN02341, pfkB-type carbohydrate kinase 2e-12
cd01173254 cd01173, pyridoxal_pyridoxamine_kinase, Pyridoxal 8e-12
cd01943328 cd01943, MAK32, MAK32 kinase 8e-12
PLN02548332 PLN02548, PLN02548, adenosine kinase 9e-12
COG2240281 COG2240, PdxK, Pyridoxal/pyridoxine/pyridoxamine k 3e-11
PRK09434304 PRK09434, PRK09434, aminoimidazole riboside kinase 3e-11
PRK09850313 PRK09850, PRK09850, pseudouridine kinase; Provisio 5e-11
PRK09513312 PRK09513, fruK, 1-phosphofructokinase; Provisional 1e-10
cd01937254 cd01937, ribokinase_group_D, Ribokinase-like subgr 2e-10
TIGR01231309 TIGR01231, lacC, tagatose-6-phosphate kinase 2e-10
PRK10294309 PRK10294, PRK10294, 6-phosphofructokinase 2; Provi 7e-10
PLN02379367 PLN02379, PLN02379, pfkB-type carbohydrate kinase 8e-09
cd01946277 cd01946, ribokinase_group_C, Ribokinase-like subgr 6e-08
PRK12413253 PRK12413, PRK12413, phosphomethylpyrimidine kinase 1e-07
PRK11316 473 PRK11316, PRK11316, bifunctional heptose 7-phospha 3e-07
pfam08543246 pfam08543, Phos_pyr_kin, Phosphomethylpyrimidine k 3e-07
cd01169242 cd01169, HMPP_kinase, 4-amino-5-hydroxymethyl-2-me 5e-07
PRK13508309 PRK13508, PRK13508, tagatose-6-phosphate kinase; P 8e-07
cd00287196 cd00287, ribokinase_pfkB_like, ribokinase/pfkB sup 1e-06
PRK05756286 PRK05756, PRK05756, pyridoxamine kinase; Validated 1e-06
PRK12412268 PRK12412, PRK12412, pyridoxal kinase; Reviewed 1e-06
TIGR00687286 TIGR00687, pyridox_kin, pyridoxal kinase 3e-06
COG0351263 COG0351, ThiD, Hydroxymethylpyrimidine/phosphometh 4e-06
PLN02813426 PLN02813, PLN02813, pfkB-type carbohydrate kinase 4e-06
PTZ00344296 PTZ00344, PTZ00344, pyridoxal kinase; Provisional 8e-06
cd01939290 cd01939, Ketohexokinase, Ketohexokinase (fructokin 3e-05
TIGR00097254 TIGR00097, HMP-P_kinase, phosphomethylpyrimidine k 5e-05
PRK08176281 PRK08176, pdxK, pyridoxal-pyridoxamine kinase/hydr 6e-05
PRK12616270 PRK12616, PRK12616, pyridoxal kinase; Reviewed 0.002
PRK08573 448 PRK08573, PRK08573, phosphomethylpyrimidine kinase 0.003
>gnl|CDD|238579 cd01174, ribokinase, Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP Back     alignment and domain information 
 Score =  326 bits (839), Expect = e-111
 Identities = 127/300 (42%), Positives = 166/300 (55%), Gaps = 10/300 (3%)

Query: 69  PLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVG 128
            +VVVGS N D+   +DRLPK GETV   + +T  GGKGANQA   A+L      +G VG
Sbjct: 1   KVVVVGSINVDLVTRVDRLPKPGETVLGSSFETGPGGKGANQAVAAARLGARVAMIGAVG 60

Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
           +DA G  + + L   G+ + Y  V    G PTG AV+ +   G+N I++V G N    P 
Sbjct: 61  DDAFGDELLENLREEGIDVSY--VEVVVGAPTGTAVITVDESGENRIVVVPGANGELTPA 118

Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
              D  LE++  A ++LLQ EIP    +   +AAR AGV VI +      P+P ELL  +
Sbjct: 119 D-VDAALELIAAADVLLLQLEIPLETVLAALRAARRAGVTVILNPAPAR-PLPAELLALV 176

Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
           DIL PNE+E   LTG+     E   +A       GV+ V+V LGAKG+ L   GE     
Sbjct: 177 DILVPNETEAALLTGIEVTDEEDAEKAARLLLAKGVKNVIVTLGAKGALLASGGE----V 232

Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
             +PA +V  +DTTGAGDTF  + A     G S EE +RFA AAA+L V   GA PS+P 
Sbjct: 233 EHVPAFKVKAVDTTGAGDTFIGALAAALARGLSLEEAIRFANAAAALSVTRPGAQPSIPT 292

This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides and histidine, and for entry into the pentose phosphate pathway. Ribokinase is dimeric in solution. Length = 292
>gnl|CDD|233751 TIGR02152, D_ribokin_bact, ribokinase Back     alignment and domain information
>gnl|CDD|223598 COG0524, RbsK, Sugar kinases, ribokinase family [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|215842 pfam00294, PfkB, pfkB family carbohydrate kinase Back     alignment and domain information
>gnl|CDD|236858 PRK11142, PRK11142, ribokinase; Provisional Back     alignment and domain information
>gnl|CDD|185541 PTZ00292, PTZ00292, ribokinase; Provisional Back     alignment and domain information
>gnl|CDD|238917 cd01942, ribokinase_group_A, Ribokinase-like subgroup A Back     alignment and domain information
>gnl|CDD|238571 cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP) Back     alignment and domain information
>gnl|CDD|238916 cd01941, YeiC_kinase_like, YeiC-like sugar kinase Back     alignment and domain information
>gnl|CDD|238570 cd01164, FruK_PfkB_like, 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases Back     alignment and domain information
>gnl|CDD|238573 cd01168, adenosine_kinase, Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside analogues at the 5'-hydroxyl using ATP or GTP as the phosphate donor Back     alignment and domain information
>gnl|CDD|234133 TIGR03168, 1-PFK, hexose kinase, 1-phosphofructokinase family Back     alignment and domain information
>gnl|CDD|238920 cd01945, ribokinase_group_B, Ribokinase-like subgroup B Back     alignment and domain information
>gnl|CDD|238572 cd01167, bac_FRK, Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate Back     alignment and domain information
>gnl|CDD|224030 COG1105, FruK, Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|234367 TIGR03828, pfkB, 1-phosphofructokinase Back     alignment and domain information
>gnl|CDD|238577 cd01172, RfaE_like, RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the lipopolysaccharide (LPS) core precursor ADP-L-glycero-D-manno-heptose Back     alignment and domain information
>gnl|CDD|238177 cd00287, ribokinase_pfkB_like, ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group Back     alignment and domain information
>gnl|CDD|215183 PLN02323, PLN02323, probable fructokinase Back     alignment and domain information
>gnl|CDD|238922 cd01947, Guanosine_kinase_like, Guanosine kinase-like sugar kinases Back     alignment and domain information
>gnl|CDD|238919 cd01944, YegV_kinase_like, YegV-like sugar kinase Back     alignment and domain information
>gnl|CDD|238915 cd01940, Fructoselysine_kinase_like, Fructoselysine kinase-like Back     alignment and domain information
>gnl|CDD|233776 TIGR02198, rfaE_dom_I, rfaE bifunctional protein, domain I Back     alignment and domain information
>gnl|CDD|225425 COG2870, RfaE, ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>gnl|CDD|182090 PRK09813, PRK09813, fructoselysine 6-kinase; Provisional Back     alignment and domain information
>gnl|CDD|182165 PRK09954, PRK09954, putative kinase; Provisional Back     alignment and domain information
>gnl|CDD|240328 PTZ00247, PTZ00247, adenosine kinase; Provisional Back     alignment and domain information
>gnl|CDD|215195 PLN02341, PLN02341, pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>gnl|CDD|238578 cd01173, pyridoxal_pyridoxamine_kinase, Pyridoxal kinase plays a key role in the synthesis of the active coenzyme pyridoxal-5'-phosphate (PLP), by catalyzing the phosphorylation of the precursor vitamin B6 in the presence of Zn2+ and ATP Back     alignment and domain information
>gnl|CDD|238918 cd01943, MAK32, MAK32 kinase Back     alignment and domain information
>gnl|CDD|178163 PLN02548, PLN02548, adenosine kinase Back     alignment and domain information
>gnl|CDD|225149 COG2240, PdxK, Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|236514 PRK09434, PRK09434, aminoimidazole riboside kinase; Provisional Back     alignment and domain information
>gnl|CDD|182111 PRK09850, PRK09850, pseudouridine kinase; Provisional Back     alignment and domain information
>gnl|CDD|181923 PRK09513, fruK, 1-phosphofructokinase; Provisional Back     alignment and domain information
>gnl|CDD|238912 cd01937, ribokinase_group_D, Ribokinase-like subgroup D Back     alignment and domain information
>gnl|CDD|130298 TIGR01231, lacC, tagatose-6-phosphate kinase Back     alignment and domain information
>gnl|CDD|182361 PRK10294, PRK10294, 6-phosphofructokinase 2; Provisional Back     alignment and domain information
>gnl|CDD|178005 PLN02379, PLN02379, pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>gnl|CDD|238921 cd01946, ribokinase_group_C, Ribokinase-like subgroup C Back     alignment and domain information
>gnl|CDD|183513 PRK12413, PRK12413, phosphomethylpyrimidine kinase; Provisional Back     alignment and domain information
>gnl|CDD|183085 PRK11316, PRK11316, bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|219893 pfam08543, Phos_pyr_kin, Phosphomethylpyrimidine kinase Back     alignment and domain information
>gnl|CDD|238574 cd01169, HMPP_kinase, 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate kinase (HMPP-kinase) catalyzes two consecutive phosphorylation steps in the thiamine phosphate biosynthesis pathway, leading to the synthesis of vitamin B1 Back     alignment and domain information
>gnl|CDD|237405 PRK13508, PRK13508, tagatose-6-phosphate kinase; Provisional Back     alignment and domain information
>gnl|CDD|238177 cd00287, ribokinase_pfkB_like, ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group Back     alignment and domain information
>gnl|CDD|235592 PRK05756, PRK05756, pyridoxamine kinase; Validated Back     alignment and domain information
>gnl|CDD|183512 PRK12412, PRK12412, pyridoxal kinase; Reviewed Back     alignment and domain information
>gnl|CDD|211599 TIGR00687, pyridox_kin, pyridoxal kinase Back     alignment and domain information
>gnl|CDD|223428 COG0351, ThiD, Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|215434 PLN02813, PLN02813, pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>gnl|CDD|240372 PTZ00344, PTZ00344, pyridoxal kinase; Provisional Back     alignment and domain information
>gnl|CDD|238914 cd01939, Ketohexokinase, Ketohexokinase (fructokinase, KHK) catalyzes the phosphorylation of fructose to fructose-1-phosphate (F1P), the first step in the metabolism of dietary fructose Back     alignment and domain information
>gnl|CDD|232823 TIGR00097, HMP-P_kinase, phosphomethylpyrimidine kinase Back     alignment and domain information
>gnl|CDD|181269 PRK08176, pdxK, pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase; Reviewed Back     alignment and domain information
>gnl|CDD|183624 PRK12616, PRK12616, pyridoxal kinase; Reviewed Back     alignment and domain information
>gnl|CDD|236297 PRK08573, PRK08573, phosphomethylpyrimidine kinase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 377
PTZ00292326 ribokinase; Provisional 100.0
PRK11142306 ribokinase; Provisional 100.0
PRK09954362 putative kinase; Provisional 100.0
cd01174292 ribokinase Ribokinase catalyses the phosphorylatio 100.0
PRK09850313 pseudouridine kinase; Provisional 100.0
PLN02341470 pfkB-type carbohydrate kinase family protein 100.0
PRK15074434 inosine/guanosine kinase; Provisional 100.0
PLN02813426 pfkB-type carbohydrate kinase family protein 100.0
PLN02323330 probable fructokinase 100.0
KOG2855330 consensus Ribokinase [Carbohydrate transport and m 100.0
TIGR02152293 D_ribokin_bact ribokinase. This model describes ri 100.0
cd01168312 adenosine_kinase Adenosine kinase (AK) catalyzes t 100.0
cd01945284 ribokinase_group_B Ribokinase-like subgroup B. Fou 100.0
PTZ00247345 adenosine kinase; Provisional 100.0
COG0524311 RbsK Sugar kinases, ribokinase family [Carbohydrat 100.0
PLN02967581 kinase 100.0
PLN02543496 pfkB-type carbohydrate kinase family protein 100.0
TIGR02198315 rfaE_dom_I rfaE bifunctional protein, domain I. Rf 100.0
PF00294301 PfkB: pfkB family carbohydrate kinase; InterPro: I 100.0
cd01944289 YegV_kinase_like YegV-like sugar kinase. Found onl 100.0
cd01942279 ribokinase_group_A Ribokinase-like subgroup A. Fou 100.0
TIGR03828304 pfkB 1-phosphofructokinase. This enzyme acts in co 100.0
PLN02379367 pfkB-type carbohydrate kinase family protein 100.0
cd01939290 Ketohexokinase Ketohexokinase (fructokinase, KHK) 100.0
cd01172304 RfaE_like RfaE encodes a bifunctional ADP-heptose 100.0
cd01941288 YeiC_kinase_like YeiC-like sugar kinase. Found in 100.0
PRK09434304 aminoimidazole riboside kinase; Provisional 100.0
cd01166294 KdgK 2-keto-3-deoxygluconate kinase (KdgK) phospho 100.0
cd01947265 Guanosine_kinase_like Guanosine kinase-like sugar 100.0
PRK10294309 6-phosphofructokinase 2; Provisional 100.0
cd01167295 bac_FRK Fructokinases (FRKs) mainly from bacteria 100.0
PRK13508309 tagatose-6-phosphate kinase; Provisional 100.0
PRK09513312 fruK 1-phosphofructokinase; Provisional 100.0
TIGR03168303 1-PFK hexose kinase, 1-phosphofructokinase family. 100.0
TIGR01231309 lacC tagatose-6-phosphate kinase. This enzyme is p 100.0
cd01940264 Fructoselysine_kinase_like Fructoselysine kinase-l 100.0
cd01164289 FruK_PfkB_like 1-phosphofructokinase (FruK), minor 100.0
PRK11316 473 bifunctional heptose 7-phosphate kinase/heptose 1- 100.0
COG1105310 FruK Fructose-1-phosphate kinase and related fruct 100.0
PLN02548332 adenosine kinase 100.0
cd01943328 MAK32 MAK32 kinase. MAK32 is a protein found prima 100.0
PRK09813260 fructoselysine 6-kinase; Provisional 100.0
PLN02630335 pfkB-type carbohydrate kinase family protein 100.0
COG2870 467 RfaE ADP-heptose synthase, bifunctional sugar kina 100.0
cd01946277 ribokinase_group_C Ribokinase-like subgroup C. Fou 100.0
cd01937254 ribokinase_group_D Ribokinase-like subgroup D. Fou 100.0
KOG2854343 consensus Possible pfkB family carbohydrate kinase 100.0
KOG2947308 consensus Carbohydrate kinase [Carbohydrate transp 100.0
cd00287196 ribokinase_pfkB_like ribokinase/pfkB superfamily: 99.97
PRK12412268 pyridoxal kinase; Reviewed 99.83
TIGR00097254 HMP-P_kinase phosphomethylpyrimidine kinase. This 99.81
cd01169242 HMPP_kinase 4-amino-5-hydroxymethyl-2-methyl-pyrim 99.79
PRK12413253 phosphomethylpyrimidine kinase; Provisional 99.79
PRK08573 448 phosphomethylpyrimidine kinase; Provisional 99.78
cd01173254 pyridoxal_pyridoxamine_kinase Pyridoxal kinase pla 99.77
TIGR00687286 pyridox_kin pyridoxal kinase. ThiD and related pro 99.76
PRK06427266 bifunctional hydroxy-methylpyrimidine kinase/ hydr 99.76
PRK05756286 pyridoxamine kinase; Validated 99.76
PRK07105284 pyridoxamine kinase; Validated 99.76
PRK12616270 pyridoxal kinase; Reviewed 99.73
KOG3009614 consensus Predicted carbohydrate kinase, contains 99.73
PRK08176281 pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpy 99.72
cd01171254 YXKO-related B.subtilis YXKO protein of unknown fu 99.6
PLN02898 502 HMP-P kinase/thiamin-monophosphate pyrophosphoryla 99.6
PTZ00347504 phosphomethylpyrimidine kinase; Provisional 99.58
PTZ00344296 pyridoxal kinase; Provisional 99.54
TIGR00196272 yjeF_cterm yjeF C-terminal region, hydroxyethylthi 99.53
cd01170242 THZ_kinase 4-methyl-5-beta-hydroxyethylthiazole (T 99.5
PF08543246 Phos_pyr_kin: Phosphomethylpyrimidine kinase; Inte 99.46
PRK14713 530 multifunctional hydroxymethylpyrimidine phosphokin 99.46
PRK09517 755 multifunctional thiamine-phosphate pyrophosphoryla 99.46
COG0351263 ThiD Hydroxymethylpyrimidine/phosphomethylpyrimidi 99.45
PLN02978308 pyridoxal kinase 99.39
COG2240281 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coe 99.24
PRK09355263 hydroxyethylthiazole kinase; Validated 99.11
PTZ00493321 phosphomethylpyrimidine kinase; Provisional 99.09
TIGR00694249 thiM hydroxyethylthiazole kinase. This model repre 98.97
KOG2598 523 consensus Phosphomethylpyrimidine kinase [Coenzyme 98.54
KOG2599308 consensus Pyridoxal/pyridoxine/pyridoxamine kinase 98.51
PF02110246 HK: Hydroxyethylthiazole kinase family; InterPro: 98.2
PRK03979463 ADP-specific phosphofructokinase; Provisional 98.14
PRK10565508 putative carbohydrate kinase; Provisional 98.05
PRK14039453 ADP-dependent glucokinase; Provisional 98.04
TIGR02045446 P_fruct_ADP ADP-specific phosphofructokinase. Phos 97.97
PF01256242 Carb_kinase: Carbohydrate kinase; InterPro: IPR000 97.95
COG2145265 ThiM Hydroxyethylthiazole kinase, sugar kinase fam 97.84
PRK14038453 ADP-dependent glucokinase; Provisional 97.54
PF04587444 ADP_PFK_GK: ADP-specific Phosphofructokinase/Gluco 97.32
COG0063284 Predicted sugar kinase [Carbohydrate transport and 96.64
KOG3974306 consensus Predicted sugar kinase [Carbohydrate tra 96.64
cd01938445 ADPGK_ADPPFK ADP-dependent glucokinase (ADPGK) and 94.42
COG4809466 Archaeal ADP-dependent phosphofructokinase/glucoki 92.02
PRK10076213 pyruvate formate lyase II activase; Provisional 85.63
>PTZ00292 ribokinase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=5.4e-50  Score=376.65  Aligned_cols=306  Identities=29%  Similarity=0.453  Sum_probs=266.4

Q ss_pred             CCCEEEEccceeeeeeccCCCCCCCCeeeeCcceecCCChHHHHHHHHHHcCCCceEEEEecCCccHHHHHHHHHhCCCC
Q 017101           67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGVR  146 (377)
Q Consensus        67 ~~~I~viG~~~vD~~~~v~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~G~~i~~~l~~~gVd  146 (377)
                      +++|+|+|++++|+++.++++|.++.....+.....+||++.|+|++|++||.++.++|.+|+|.+|+.+++.|++.||+
T Consensus        15 ~~~vlviG~~~vD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~lG~~~~~is~vG~D~~g~~i~~~l~~~GI~   94 (326)
T PTZ00292         15 EPDVVVVGSSNTDLIGYVDRMPQVGETLHGTSFHKGFGGKGANQAVMASKLGAKVAMVGMVGTDGFGSDTIKNFKRNGVN   94 (326)
T ss_pred             CCCEEEEccceeeEEEecCCCCCCCCceeecCceeCCCCcHHHHHHHHHHcCCCeEEEEEECCChhHHHHHHHHHHcCCC
Confidence            67899999999999999999999999888888899999999999999999999999999999999999999999999999


Q ss_pred             cccEEeccCCCCCCceEEEEEe-cCCCeeEEEECCCCCCCCCcCcCchhHHHHhh-cCEEEEccCCCHHHHHHHHHHHHh
Q 017101          147 LDYMNVVKDGGVPTGHAVVMLQ-SDGQNSIIIVGGTNMSCWPEKFGDEDLEVVKK-AGIVLLQREIPDSVNIQVAKAARS  224 (377)
Q Consensus       147 ~~~v~~~~~~~~~T~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~l~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~a~~  224 (377)
                      ++++...  ++.+|+.++++++ .+|+++++.+++++....+..+. ...+.+.. ++++++++..+.+...++++.+++
T Consensus        95 ~~~~~~~--~~~~t~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~a~~  171 (326)
T PTZ00292         95 TSFVSRT--ENSSTGLAMIFVDTKTGNNEIVIIPGANNALTPQMVD-AQTDNIQNICKYLICQNEIPLETTLDALKEAKE  171 (326)
T ss_pred             hhhEEEc--CCCCCcEEEEEEeCCCCceEEEEeCCccccCCHHHHH-HHHHHhhhhCCEEEECCCCCHHHHHHHHHHHHH
Confidence            9999877  6778999999998 78999998887765443322222 12244667 899999887777778889999999


Q ss_pred             CCCcEEEcCCCCCC----CChhhhhccCceeccCHHHHhhccCCCCCCHHHHHHHHHHHHhcCCCEEEEeeCCCCeEEEE
Q 017101          225 AGVPVIFDAGGMDA----PIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFV  300 (377)
Q Consensus       225 ~g~~v~~D~~~~~~----~~~~~ll~~~dvl~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~  300 (377)
                      .|+++++|++....    .....+++++|++++|++|++.+++....+.++..++++.+.+.+++.|++|+|++|++++.
T Consensus       172 ~g~~v~~D~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvT~G~~Ga~~~~  251 (326)
T PTZ00292        172 RGCYTVFNPAPAPKLAEVEIIKPFLKYVSLFCVNEVEAALITGMEVTDTESAFKASKELQQLGVENVIITLGANGCLIVE  251 (326)
T ss_pred             cCCEEEEECCCCccccccccHHHHHhcCCEEcCCHHHHHHHhCCCCCChhHHHHHHHHHHHcCCCeEEEEeCCCcEEEEe
Confidence            99999999986533    35678889999999999999999987655556677778888888999999999999998876


Q ss_pred             eCCeeEEeccCCCCcccCccCchHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHhh
Q 017101          301 EGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKSVLNLLQY  376 (377)
Q Consensus       301 ~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g~~l~~al~~a~~aAa~~~~~~G~~~~~p~~e~i~~~l~~  376 (377)
                      .++..+++|++ ..+++|||||||+|+|||++++++|+++++|+++|+++|++++++.|+.+++|+.+++++.+++
T Consensus       252 ~~~~~~~~~~~-~~~vvDttGAGDaF~ag~l~~l~~g~~~~~al~~a~a~Aa~~v~~~G~~~~~~~~~~~~~~~~~  326 (326)
T PTZ00292        252 KENEPVHVPGK-RVKAVDTTGAGDCFVGSMAYFMSRGKDLKESCKRANRIAAISVTRHGTQSSYPHPSELPADVKE  326 (326)
T ss_pred             CCCceEEccCC-ccccCCCcchHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHcCCCCccccCCCHHHHHHHhcC
Confidence            65545778876 5789999999999999999999999999999999999999999999999889999999987753

>PRK11142 ribokinase; Provisional Back     alignment and domain information
>PRK09954 putative kinase; Provisional Back     alignment and domain information
>cd01174 ribokinase Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP Back     alignment and domain information
>PRK09850 pseudouridine kinase; Provisional Back     alignment and domain information
>PLN02341 pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>PRK15074 inosine/guanosine kinase; Provisional Back     alignment and domain information
>PLN02813 pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>PLN02323 probable fructokinase Back     alignment and domain information
>KOG2855 consensus Ribokinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR02152 D_ribokin_bact ribokinase Back     alignment and domain information
>cd01168 adenosine_kinase Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside analogues at the 5'-hydroxyl using ATP or GTP as the phosphate donor Back     alignment and domain information
>cd01945 ribokinase_group_B Ribokinase-like subgroup B Back     alignment and domain information
>PTZ00247 adenosine kinase; Provisional Back     alignment and domain information
>COG0524 RbsK Sugar kinases, ribokinase family [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02967 kinase Back     alignment and domain information
>PLN02543 pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>TIGR02198 rfaE_dom_I rfaE bifunctional protein, domain I Back     alignment and domain information
>PF00294 PfkB: pfkB family carbohydrate kinase; InterPro: IPR011611 This entry includes a variety of carbohydrate and pyrimidine kinases Back     alignment and domain information
>cd01944 YegV_kinase_like YegV-like sugar kinase Back     alignment and domain information
>cd01942 ribokinase_group_A Ribokinase-like subgroup A Back     alignment and domain information
>TIGR03828 pfkB 1-phosphofructokinase Back     alignment and domain information
>PLN02379 pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>cd01939 Ketohexokinase Ketohexokinase (fructokinase, KHK) catalyzes the phosphorylation of fructose to fructose-1-phosphate (F1P), the first step in the metabolism of dietary fructose Back     alignment and domain information
>cd01172 RfaE_like RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the lipopolysaccharide (LPS) core precursor ADP-L-glycero-D-manno-heptose Back     alignment and domain information
>cd01941 YeiC_kinase_like YeiC-like sugar kinase Back     alignment and domain information
>PRK09434 aminoimidazole riboside kinase; Provisional Back     alignment and domain information
>cd01166 KdgK 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP) Back     alignment and domain information
>cd01947 Guanosine_kinase_like Guanosine kinase-like sugar kinases Back     alignment and domain information
>PRK10294 6-phosphofructokinase 2; Provisional Back     alignment and domain information
>cd01167 bac_FRK Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate Back     alignment and domain information
>PRK13508 tagatose-6-phosphate kinase; Provisional Back     alignment and domain information
>PRK09513 fruK 1-phosphofructokinase; Provisional Back     alignment and domain information
>TIGR03168 1-PFK hexose kinase, 1-phosphofructokinase family Back     alignment and domain information
>TIGR01231 lacC tagatose-6-phosphate kinase Back     alignment and domain information
>cd01940 Fructoselysine_kinase_like Fructoselysine kinase-like Back     alignment and domain information
>cd01164 FruK_PfkB_like 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases Back     alignment and domain information
>PRK11316 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; Provisional Back     alignment and domain information
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02548 adenosine kinase Back     alignment and domain information
>cd01943 MAK32 MAK32 kinase Back     alignment and domain information
>PRK09813 fructoselysine 6-kinase; Provisional Back     alignment and domain information
>PLN02630 pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd01946 ribokinase_group_C Ribokinase-like subgroup C Back     alignment and domain information
>cd01937 ribokinase_group_D Ribokinase-like subgroup D Back     alignment and domain information
>KOG2854 consensus Possible pfkB family carbohydrate kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2947 consensus Carbohydrate kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd00287 ribokinase_pfkB_like ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group Back     alignment and domain information
>PRK12412 pyridoxal kinase; Reviewed Back     alignment and domain information
>TIGR00097 HMP-P_kinase phosphomethylpyrimidine kinase Back     alignment and domain information
>cd01169 HMPP_kinase 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate kinase (HMPP-kinase) catalyzes two consecutive phosphorylation steps in the thiamine phosphate biosynthesis pathway, leading to the synthesis of vitamin B1 Back     alignment and domain information
>PRK12413 phosphomethylpyrimidine kinase; Provisional Back     alignment and domain information
>PRK08573 phosphomethylpyrimidine kinase; Provisional Back     alignment and domain information
>cd01173 pyridoxal_pyridoxamine_kinase Pyridoxal kinase plays a key role in the synthesis of the active coenzyme pyridoxal-5'-phosphate (PLP), by catalyzing the phosphorylation of the precursor vitamin B6 in the presence of Zn2+ and ATP Back     alignment and domain information
>TIGR00687 pyridox_kin pyridoxal kinase Back     alignment and domain information
>PRK06427 bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed Back     alignment and domain information
>PRK05756 pyridoxamine kinase; Validated Back     alignment and domain information
>PRK07105 pyridoxamine kinase; Validated Back     alignment and domain information
>PRK12616 pyridoxal kinase; Reviewed Back     alignment and domain information
>KOG3009 consensus Predicted carbohydrate kinase, contains PfkB domain [General function prediction only] Back     alignment and domain information
>PRK08176 pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase; Reviewed Back     alignment and domain information
>cd01171 YXKO-related B Back     alignment and domain information
>PLN02898 HMP-P kinase/thiamin-monophosphate pyrophosphorylase Back     alignment and domain information
>PTZ00347 phosphomethylpyrimidine kinase; Provisional Back     alignment and domain information
>PTZ00344 pyridoxal kinase; Provisional Back     alignment and domain information
>TIGR00196 yjeF_cterm yjeF C-terminal region, hydroxyethylthiazole kinase-related Back     alignment and domain information
>cd01170 THZ_kinase 4-methyl-5-beta-hydroxyethylthiazole (Thz) kinase catalyzes the phosphorylation of the hydroxylgroup of Thz Back     alignment and domain information
>PF08543 Phos_pyr_kin: Phosphomethylpyrimidine kinase; InterPro: IPR013749 This enzyme 2 Back     alignment and domain information
>PRK14713 multifunctional hydroxymethylpyrimidine phosphokinase/4-amino-5-aminomethyl-2-methylpyrimidine hydrolase; Provisional Back     alignment and domain information
>PRK09517 multifunctional thiamine-phosphate pyrophosphorylase/synthase/phosphomethylpyrimidine kinase; Provisional Back     alignment and domain information
>COG0351 ThiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [Coenzyme metabolism] Back     alignment and domain information
>PLN02978 pyridoxal kinase Back     alignment and domain information
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism] Back     alignment and domain information
>PRK09355 hydroxyethylthiazole kinase; Validated Back     alignment and domain information
>PTZ00493 phosphomethylpyrimidine kinase; Provisional Back     alignment and domain information
>TIGR00694 thiM hydroxyethylthiazole kinase Back     alignment and domain information
>KOG2598 consensus Phosphomethylpyrimidine kinase [Coenzyme transport and metabolism; Transcription] Back     alignment and domain information
>KOG2599 consensus Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme transport and metabolism] Back     alignment and domain information
>PF02110 HK: Hydroxyethylthiazole kinase family; InterPro: IPR000417 Thiamine pyrophosphate (TPP), a required cofactor for many enzymes in the cell, is synthesised de novo in Salmonella typhimurium [] Back     alignment and domain information
>PRK03979 ADP-specific phosphofructokinase; Provisional Back     alignment and domain information
>PRK10565 putative carbohydrate kinase; Provisional Back     alignment and domain information
>PRK14039 ADP-dependent glucokinase; Provisional Back     alignment and domain information
>TIGR02045 P_fruct_ADP ADP-specific phosphofructokinase Back     alignment and domain information
>PF01256 Carb_kinase: Carbohydrate kinase; InterPro: IPR000631 This family is related to Hydroxyethylthiazole kinase IPR000417 from INTERPRO and PfkB carbohydrate kinase IPR011611 from INTERPRO implying that it also a carbohydrate kinase Back     alignment and domain information
>COG2145 ThiM Hydroxyethylthiazole kinase, sugar kinase family [Coenzyme metabolism] Back     alignment and domain information
>PRK14038 ADP-dependent glucokinase; Provisional Back     alignment and domain information
>PF04587 ADP_PFK_GK: ADP-specific Phosphofructokinase/Glucokinase conserved region; InterPro: IPR007666 Although ATP is the most common phosphoryl group donor for kinases, certain hyperthermophilic archaea, such as Thermococcus litoralis and Pyrococcus furiosus, utilise unusual ADP-dependent glucokinases (ADPGKs) and phosphofructokinases (ADPPKKs) in their glycolytic pathways [, , ] Back     alignment and domain information
>COG0063 Predicted sugar kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd01938 ADPGK_ADPPFK ADP-dependent glucokinase (ADPGK) and phosphofructokinase (ADPPFK) Back     alignment and domain information
>COG4809 Archaeal ADP-dependent phosphofructokinase/glucokinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10076 pyruvate formate lyase II activase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query377
1vm7_A311 Crystal Structure Of Ribokinase (Tm0960) From Therm 5e-38
3ry7_A304 Crystal Sructure Of Sa239 Length = 304 2e-33
1rk2_A309 E. Coli Ribokinase Complexed With Ribose And Adp, S 3e-31
2fv7_A331 Crystal Structure Of Human Ribokinase Length = 331 3e-30
3h49_A325 Crystal Structure Of A Putative Ribokinase (Apo For 3e-19
3go6_A310 Crystal Structure Of M. Tuberculosis Ribokinase (Rv 1e-13
2c49_A302 Crystal Structure Of Methanocaldococcus Jannaschii 2e-13
2jgv_A330 Structure Of Staphylococcus Aureus D-Tagatose-6-Pho 3e-11
3ubo_A354 The Crystal Structure Of Adenosine Kinase From Sino 3e-11
4e3a_A352 Crystal Structure Of Probable Sugar Kinase Protein 4e-11
2jg1_A330 Structure Of Staphylococcus Aureus D-Tagatose-6-Pho 1e-10
3hj6_A327 Structure Of Halothermothrix Orenii Fructokinase (F 2e-10
1tz6_A339 Crystal Structure Of Aminoimidazole Riboside Kinase 3e-10
3i3y_A299 Crystal Structure Of Ribokinase In Complex With D-R 4e-10
1tyy_A339 Crystal Structure Of Aminoimidazole Riboside Kinase 8e-10
1v19_A309 2-Keto-3-Deoxygluconate Kinase From Thermus Thermop 1e-09
3kzh_A328 Crystal Structure Of A Putative Sugar Kinase From C 2e-09
2qcv_A332 Crystal Structure Of A Putative 5-Dehydro-2-Deoxygl 4e-09
2hqq_A298 Crystal Structure Of Human Ketohexokinase Complexed 4e-09
2abq_A306 Crystal Structure Of Fructose-1-Phosphate Kinase Fr 8e-09
2hlz_A312 Crystal Structure Of Human Ketohexokinase (Casp Tar 3e-08
2v78_A313 Crystal Structure Of Sulfolobus Solfataricus 2-Keto 4e-08
2jg5_A306 Crystal Structure Of A Putative Phosphofructokinase 1e-07
3lhx_A319 Crystal Structure Of A Ketodeoxygluconokinase (Kdgk 1e-07
3uqe_A309 Crystal Structure Of The Phosphofructokinase-2 Muta 2e-07
3cqd_A309 Structure Of The Tetrameric Inhibited Form Of Phosp 2e-07
2qhp_A296 Crystal Structure Of Fructokinase (Np_810670.1) Fro 3e-07
2dcn_A311 Crystal Structure Of 2-Keto-3-Deoxygluconate Kinase 6e-07
3b3l_A298 Crystal Structures Of Alternatively-Spliced Isoform 6e-07
3nbv_A313 X-Ray Structure Of Ketohexokinase In Complex With A 8e-07
2rbc_A343 Crystal Structure Of A Putative Ribokinase From Agr 1e-06
3loo_A365 Crystal Structure Of Anopheles Gambiae Adenosine Ki 4e-06
3ljs_A338 Crystal Structure Of Fructokinase From Xylella Fast 4e-06
1bx4_A345 Structure Of Human Adenosine Kinase At 1.50 Angstro 5e-06
4du5_A336 Crystal Structure Of Pfkb Protein From Polaromonas 6e-06
2nwh_A317 Carbohydrate Kinase From Agrobacterium Tumefaciens 6e-06
3iq0_A330 Crystal Structure Of A Putative Ribokinase Ii In Co 7e-06
3bf5_A306 Crystal Structure Of Putative Ribokinase (10640157) 8e-06
3q1y_A320 Allosteric Regulation By Lysine Residue: A Novel An 9e-06
3kd6_A313 Crystal Structure Of Nucleoside Kinase From Chlorob 3e-05
3ewm_A313 Crystal Structure Of An Uncharacterized Sugar Kinas 5e-04
3hic_A320 The Crystal Structure Of Phosphofructokinase(Lin219 5e-04
3gbu_A313 Crystal Structure Of An Uncharacterized Sugar Kinas 5e-04
>pdb|1VM7|A Chain A, Crystal Structure Of Ribokinase (Tm0960) From Thermotoga Maritima At 2.15 A Resolution Length = 311 Back     alignment and structure 
Iteration: 1

 Score =  155 bits (391), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 111/305 (36%), Positives = 156/305 (51%), Gaps = 15/305 (4%)
Query: 72  VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHP-TYFVGQVGED 130
           VVGS+N DI +++D   K GET  A       GGKGANQA   AK+      FV  +G D
Sbjct: 19  VVGSSNIDIVLKVDHFTKPGETQKAIEMNVFPGGKGANQAVTVAKIGEKGCRFVTCIGND 78
Query: 131 ANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKF 190
               L+ +     G+   Y+ V     +PTG A + +   GQN III  G N     E  
Sbjct: 79  DYSDLLIENYEKLGIT-GYIRV----SLPTGRAFIEVDKTGQNRIIIFPGANAELKKELI 133
Query: 191 GDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDI 250
              D   + ++ I+LLQ EIP    ++ AK  R  G+ VIFD       I +E+  ++D 
Sbjct: 134 ---DWNTLSESDILLLQNEIPFETTLECAK--RFNGI-VIFDPAPAQG-INEEIFQYLDY 186
Query: 251 LSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSI 310
           L+PNE E+  L+      +  + +A  K  ++GV+ V+VKLG KG  L  + EK  K   
Sbjct: 187 LTPNEKEIEALSKDFFGEFLTVEKAAEKFLELGVKNVIVKLGDKGVLLVNKNEK--KHFP 244
Query: 311 IPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKSV 370
               + +DTT AGD F  +FAV   EGK+ EE + F  AAA++ V   GA  S+P R+ V
Sbjct: 245 TFKVKAVDTTAAGDVFNGAFAVALSEGKNPEEAVIFGTAAAAISVTRLGAQSSIPAREEV 304
Query: 371 LNLLQ 375
              L+
Sbjct: 305 EAFLK 309
>pdb|3RY7|A Chain A, Crystal Sructure Of Sa239 Length = 304 Back     alignment and structure
>pdb|1RK2|A Chain A, E. Coli Ribokinase Complexed With Ribose And Adp, Solved In Space Group P212121 Length = 309 Back     alignment and structure
>pdb|2FV7|A Chain A, Crystal Structure Of Human Ribokinase Length = 331 Back     alignment and structure
>pdb|3H49|A Chain A, Crystal Structure Of A Putative Ribokinase (Apo Form) From E.Coli At 1.8a Resolution Length = 325 Back     alignment and structure
>pdb|3GO6|A Chain A, Crystal Structure Of M. Tuberculosis Ribokinase (Rv2436) In Complex With Ribose And Amp-Pnp Length = 310 Back     alignment and structure
>pdb|2C49|A Chain A, Crystal Structure Of Methanocaldococcus Jannaschii Nucleoside Kinase - An Archaeal Member Of The Ribokinase Family Length = 302 Back     alignment and structure
>pdb|2JGV|A Chain A, Structure Of Staphylococcus Aureus D-Tagatose-6-Phosphate Kinase In Complex With Adp Length = 330 Back     alignment and structure
>pdb|3UBO|A Chain A, The Crystal Structure Of Adenosine Kinase From Sinorhizobium Meliloti Length = 354 Back     alignment and structure
>pdb|4E3A|A Chain A, Crystal Structure Of Probable Sugar Kinase Protein From Rhizobium Etli Cfn 42 Length = 352 Back     alignment and structure
>pdb|2JG1|A Chain A, Structure Of Staphylococcus Aureus D-Tagatose-6-Phosphate Kinase With Cofactor And Substrate Length = 330 Back     alignment and structure
>pdb|3HJ6|A Chain A, Structure Of Halothermothrix Orenii Fructokinase (Frk) Length = 327 Back     alignment and structure
>pdb|1TZ6|A Chain A, Crystal Structure Of Aminoimidazole Riboside Kinase From Salmonella Enterica Complexed With Aminoimidazole Riboside And Atp Analog Length = 339 Back     alignment and structure
>pdb|3I3Y|A Chain A, Crystal Structure Of Ribokinase In Complex With D-Ribose From Klebsiella Pneumoniae Length = 299 Back     alignment and structure
>pdb|1TYY|A Chain A, Crystal Structure Of Aminoimidazole Riboside Kinase From Salmonella Enterica Length = 339 Back     alignment and structure
>pdb|1V19|A Chain A, 2-Keto-3-Deoxygluconate Kinase From Thermus Thermophilus Length = 309 Back     alignment and structure
>pdb|3KZH|A Chain A, Crystal Structure Of A Putative Sugar Kinase From Clostridium Perfringens Length = 328 Back     alignment and structure
>pdb|2QCV|A Chain A, Crystal Structure Of A Putative 5-Dehydro-2-Deoxygluconokinase (Iolc) From Bacillus Halodurans C-125 At 1.90 A Resolution Length = 332 Back     alignment and structure
>pdb|2HQQ|A Chain A, Crystal Structure Of Human Ketohexokinase Complexed To Different Sugar Molecules Length = 298 Back     alignment and structure
>pdb|2ABQ|A Chain A, Crystal Structure Of Fructose-1-Phosphate Kinase From Bacillus Halodurans Length = 306 Back     alignment and structure
>pdb|2HLZ|A Chain A, Crystal Structure Of Human Ketohexokinase (Casp Target) Length = 312 Back     alignment and structure
>pdb|2V78|A Chain A, Crystal Structure Of Sulfolobus Solfataricus 2-Keto-3- Deoxygluconate Kinase Length = 313 Back     alignment and structure
>pdb|2JG5|A Chain A, Crystal Structure Of A Putative Phosphofructokinase From Staphylococcus Aureus Length = 306 Back     alignment and structure
>pdb|3LHX|A Chain A, Crystal Structure Of A Ketodeoxygluconokinase (Kdgk) From Shigella Flexneri Length = 319 Back     alignment and structure
>pdb|3UQE|A Chain A, Crystal Structure Of The Phosphofructokinase-2 Mutant Y23d From Escherichia Coli Length = 309 Back     alignment and structure
>pdb|3CQD|A Chain A, Structure Of The Tetrameric Inhibited Form Of Phosphofructokinase-2 From Escherichia Coli Length = 309 Back     alignment and structure
>pdb|2QHP|A Chain A, Crystal Structure Of Fructokinase (Np_810670.1) From Bacteroides Thetaiotaomicron Vpi-5482 At 1.80 A Resolution Length = 296 Back     alignment and structure
>pdb|2DCN|A Chain A, Crystal Structure Of 2-Keto-3-Deoxygluconate Kinase From Sulfolobus Tokodaii Complexed With 2-Keto-6-Phosphogluconate (Alpha-Furanose Form) Length = 311 Back     alignment and structure
>pdb|3B3L|A Chain A, Crystal Structures Of Alternatively-Spliced Isoforms Of Human Ketohexokinase Length = 298 Back     alignment and structure
>pdb|3NBV|A Chain A, X-Ray Structure Of Ketohexokinase In Complex With Amp-Pnp And Fructose Length = 313 Back     alignment and structure
>pdb|2RBC|A Chain A, Crystal Structure Of A Putative Ribokinase From Agrobacterium Tumefaciens Length = 343 Back     alignment and structure
>pdb|3LOO|A Chain A, Crystal Structure Of Anopheles Gambiae Adenosine Kinase In Complex With P1,P4-Di(Adenosine-5) Tetraphosphate Length = 365 Back     alignment and structure
>pdb|3LJS|A Chain A, Crystal Structure Of Fructokinase From Xylella Fastidiosa Length = 338 Back     alignment and structure
>pdb|1BX4|A Chain A, Structure Of Human Adenosine Kinase At 1.50 Angstroms Length = 345 Back     alignment and structure
>pdb|4DU5|A Chain A, Crystal Structure Of Pfkb Protein From Polaromonas Sp. Js666 Length = 336 Back     alignment and structure
>pdb|2NWH|A Chain A, Carbohydrate Kinase From Agrobacterium Tumefaciens Length = 317 Back     alignment and structure
>pdb|3IQ0|A Chain A, Crystal Structure Of A Putative Ribokinase Ii In Complex With Atp And Mg+2 From E.Coli Length = 330 Back     alignment and structure
>pdb|3BF5|A Chain A, Crystal Structure Of Putative Ribokinase (10640157) From Thermoplasma Acidophilum At 1.91 A Resolution Length = 306 Back     alignment and structure
>pdb|3Q1Y|A Chain A, Allosteric Regulation By Lysine Residue: A Novel Anion-Hole Formation In The Ribokinase Family Length = 320 Back     alignment and structure
>pdb|3KD6|A Chain A, Crystal Structure Of Nucleoside Kinase From Chlorobium Tepidum In Complex With Amp Length = 313 Back     alignment and structure
>pdb|3EWM|A Chain A, Crystal Structure Of An Uncharacterized Sugar Kinase Ph1459 From Pyrococcus Horikoshii Length = 313 Back     alignment and structure
>pdb|3HIC|A Chain A, The Crystal Structure Of Phosphofructokinase(Lin2199)from Listeria Innocua Length = 320 Back     alignment and structure
>pdb|3GBU|A Chain A, Crystal Structure Of An Uncharacterized Sugar Kinase Ph1459 From Pyrococcus Horikoshii In Complex With Atp Length = 313 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query377
1vm7_A311 Ribokinase; TM0960, structural genomics, JCSG, pro 1e-115
1rkd_A309 Ribokinase; carbohydrate kinase, ribose, nucleotid 1e-109
2rbc_A343 Sugar kinase, AGR_C_4560P; ribokinase family, ATP- 1e-108
3kzh_A328 Probable sugar kinase; NYSGXRC, PSI-II, protein st 1e-108
2fv7_A331 Ribokinase; structural genomics, structural genomi 1e-104
3ry7_A304 Ribokinase; transferase; 2.15A {Staphylococcus aur 1e-103
2nwh_A317 AGR_C_3442P, carbohydrate kinase; structural genom 1e-103
3go6_A310 Ribokinase RBSK; phosphofructokinase, carbohydrate 1e-96
2c4e_A302 Sugar kinase MJ0406; transferase, nucleoside kinas 4e-93
3ikh_A299 Carbohydrate kinase; transferase,kinase,SAD,ribose 2e-92
3h49_A325 Ribokinase; transferase,PFKB family,sugar kinase Y 3e-89
3b1n_A326 Ribokinase, putative; rossmann fold, ATP binding, 2e-83
2pkf_A334 Adenosine kinase; transferase, S genomics, TB stru 4e-83
3bf5_A306 Ribokinase related protein; 10640157, putative rib 1e-78
2hlz_A312 Ketohexokinase; non-protein kinase, creatine kinas 2e-75
3iq0_A330 Putative ribokinase II; transferase,kinase,SAD,rib 2e-56
1tyy_A339 Putative sugar kinase; ribokinase fold, alpha/beta 9e-56
1vk4_A298 PFKB carbohydrate kinase TM0415; structural genomi 1e-55
2qhp_A296 Fructokinase; NP_810670.1, PFKB family carbohydrat 4e-54
3kd6_A313 Carbohydrate kinase, PFKB family; nucleoside kinas 1e-53
2qcv_A332 Putative 5-dehydro-2-deoxygluconokinase; structura 6e-49
3pl2_A319 Sugar kinase, ribokinase family; PFKB PFAM motif, 8e-49
3hj6_A327 Fructokinase, FRK; fructose, transferase, carbohyd 1e-48
4du5_A336 PFKB; structural genomics, PSI-biology, NEW YORK s 1e-48
2dcn_A311 Hypothetical fructokinase; 2-keto-3-deoxygluconate 2e-46
1v1a_A309 2-keto-3-deoxygluconate kinase; ATP, structural ge 5e-45
3ljs_A338 Fructokinase; fructokianse, PSI2, NYSGXRC, structu 9e-45
4e69_A328 2-dehydro-3-deoxygluconokinase; putative sugar kin 2e-43
3lhx_A319 Ketodeoxygluconokinase; structural genomics, PSI-2 3e-41
2v78_A313 Fructokinase; transferase, PFKB family carbohydrat 4e-41
3ewm_A313 Uncharacterized sugar kinase PH1459; carbohydrate 9e-39
1bx4_A345 Protein (adenosine kinase); human adenosine kinase 1e-36
3loo_A365 Anopheles gambiae adenosine kinase; AP4A, P4-DI(ad 3e-36
3otx_A347 Adenosine kinase, putative; AP5A, transferase-tran 1e-35
2abq_A306 Fructose 1-phosphate kinase; dimer, structural gen 4e-35
4e3a_A352 Sugar kinase protein; structural genomics, protein 4e-35
3ie7_A320 LIN2199 protein; phosphofructokinases, transferase 2e-34
2jg5_A306 Fructose 1-phosphate kinase; 1-phosphofructokinase 2e-34
2f02_A323 Tagatose-6-phosphate kinase; LACC, structural geno 7e-34
3ktn_A346 Carbohydrate kinase, PFKB family; PFKB family,ribo 8e-34
2jg1_A330 Tagatose-6-phosphate kinase; phosphoryl transfer, 3e-33
3cqd_A309 6-phosphofructokinase isozyme 2; phosphofructokina 1e-32
2afb_A351 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro- 3e-32
2abs_A383 Adenosine kinase, AK; ribokinase fold, alpha/beta, 2e-29
2ajr_A331 Sugar kinase, PFKB family; TM0828, possible 1-phos 3e-28
2ddm_A283 Pyridoxine kinase; pyridoxal kinase, ribokinase, p 2e-15
3mbh_A291 Putative phosphomethylpyrimidine kinase; structura 4e-14
3pzs_A289 PM kinase, pyridoxamine kinase; structural genomic 1e-13
3zs7_A300 Pyridoxal kinase; transferase, sleeping sickness; 3e-12
2yxt_A312 Pyridoxal kinase; beta sheet with alpha helix, met 1e-09
3h74_A282 Pyridoxal kinase; PSI-II, structural genomics, pro 5e-07
3dzv_A273 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_ 7e-07
1v8a_A265 Hydroxyethylthiazole kinase; alpha-beta, ATP bindi 2e-06
2i5b_A271 Phosphomethylpyrimidine kinase; ADP complex, PDXK, 1e-05
1ub0_A258 THID, phosphomethylpyrimidine kinase; thiamin bios 3e-05
1ekq_A272 Hydroxyethylthiazole kinase; alpha-beta, transfera 2e-04
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1 Length = 311 Back     alignment and structure
 Score =  336 bits (865), Expect = e-115
 Identities = 106/308 (34%), Positives = 149/308 (48%), Gaps = 19/308 (6%)

Query: 71  VVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKL-SHPTYFVGQVGE 129
            VVGS+N DI +++D   K GET  A       GGKGANQA   AK+      FV  +G 
Sbjct: 18  SVVGSSNIDIVLKVDHFTKPGETQKAIEMNVFPGGKGANQAVTVAKIGEKGCRFVTCIGN 77

Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
           D    L+ +     G+            +PTG A + +   GQN III  G N     E 
Sbjct: 78  DDYSDLLIENYEKLGI-----TGYIRVSLPTGRAFIEVDKTGQNRIIIFPGANAELKKE- 131

Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
               D   + ++ I+LLQ EIP        + A+     VIFD       I +E+  ++D
Sbjct: 132 --LIDWNTLSESDILLLQNEIPFET---TLECAKRFNGIVIFDPAPA-QGINEEIFQYLD 185

Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
            L+PNE E+  L+      +  + +A  K  ++GV+ V+VKLG KG  L V   +     
Sbjct: 186 YLTPNEKEIEALSKDFFGEFLTVEKAAEKFLELGVKNVIVKLGDKG-VLLVNKNEKK--- 241

Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
             P  +V  +DTT AGD F  +FAV   EGK+ EE + F  AAA++ V   GA  S+P R
Sbjct: 242 HFPTFKVKAVDTTAAGDVFNGAFAVALSEGKNPEEAVIFGTAAAAISVTRLGAQSSIPAR 301

Query: 368 KSVLNLLQ 375
           + V   L+
Sbjct: 302 EEVEAFLK 309
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A* Length = 309 Back     alignment and structure
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str} Length = 343 Back     alignment and structure
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens} Length = 328 Back     alignment and structure
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1 Length = 331 Back     alignment and structure
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus} Length = 304 Back     alignment and structure
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str} Length = 317 Back     alignment and structure
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A* Length = 310 Back     alignment and structure
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A Length = 302 Back     alignment and structure
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A* Length = 299 Back     alignment and structure
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A* Length = 325 Back     alignment and structure
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A* Length = 326 Back     alignment and structure
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A* Length = 334 Back     alignment and structure
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728} Length = 306 Back     alignment and structure
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A Length = 312 Back     alignment and structure
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} PDB: 3k9e_A Length = 330 Back     alignment and structure
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A* Length = 339 Back     alignment and structure
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1 Length = 298 Back     alignment and structure
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Length = 296 Back     alignment and structure
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum} Length = 313 Back     alignment and structure
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125} Length = 332 Back     alignment and structure
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} Length = 319 Back     alignment and structure
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii} Length = 327 Back     alignment and structure
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP} Length = 336 Back     alignment and structure
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A* Length = 311 Back     alignment and structure
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A Length = 309 Back     alignment and structure
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} PDB: 3lki_A* Length = 338 Back     alignment and structure
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A* Length = 328 Back     alignment and structure
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri} Length = 319 Back     alignment and structure
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A* Length = 313 Back     alignment and structure
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A* Length = 313 Back     alignment and structure
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A* Length = 345 Back     alignment and structure
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae} Length = 365 Back     alignment and structure
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A* Length = 347 Back     alignment and structure
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1 Length = 306 Back     alignment and structure
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A* Length = 352 Back     alignment and structure
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A Length = 320 Back     alignment and structure
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus} Length = 306 Back     alignment and structure
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A* Length = 323 Back     alignment and structure
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis} Length = 346 Back     alignment and structure
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A* Length = 330 Back     alignment and structure
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A* Length = 309 Back     alignment and structure
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1 Length = 351 Back     alignment and structure
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A* Length = 383 Back     alignment and structure
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1 Length = 331 Back     alignment and structure
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A* Length = 283 Back     alignment and structure
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A* Length = 291 Back     alignment and structure
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} PDB: 1td2_A* 1vi9_A* Length = 289 Back     alignment and structure
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei} Length = 300 Back     alignment and structure
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A* Length = 312 Back     alignment and structure
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A* Length = 282 Back     alignment and structure
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis} Length = 273 Back     alignment and structure
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} SCOP: c.72.1.2 PDB: 3hpd_A Length = 265 Back     alignment and structure
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis} Length = 271 Back     alignment and structure
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2 Length = 258 Back     alignment and structure
>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A* Length = 272 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query377
3ry7_A304 Ribokinase; transferase; 2.15A {Staphylococcus aur 100.0
1rkd_A309 Ribokinase; carbohydrate kinase, ribose, nucleotid 100.0
2fv7_A331 Ribokinase; structural genomics, structural genomi 100.0
3kzh_A328 Probable sugar kinase; NYSGXRC, PSI-II, protein st 100.0
2rbc_A343 Sugar kinase, AGR_C_4560P; ribokinase family, ATP- 100.0
1vm7_A311 Ribokinase; TM0960, structural genomics, JCSG, pro 100.0
3ikh_A299 Carbohydrate kinase; transferase,kinase,SAD,ribose 100.0
2nwh_A317 AGR_C_3442P, carbohydrate kinase; structural genom 100.0
3go6_A310 Ribokinase RBSK; phosphofructokinase, carbohydrate 100.0
2c4e_A302 Sugar kinase MJ0406; transferase, nucleoside kinas 100.0
3iq0_A330 Putative ribokinase II; transferase,kinase,SAD,rib 100.0
3ljs_A338 Fructokinase; fructokianse, PSI2, NYSGXRC, structu 100.0
3pl2_A319 Sugar kinase, ribokinase family; PFKB PFAM motif, 100.0
3ktn_A346 Carbohydrate kinase, PFKB family; PFKB family,ribo 100.0
3h49_A325 Ribokinase; transferase,PFKB family,sugar kinase Y 100.0
3hj6_A327 Fructokinase, FRK; fructose, transferase, carbohyd 100.0
4du5_A336 PFKB; structural genomics, PSI-biology, NEW YORK s 100.0
3vas_A370 Putative adenosine kinase; ribokinase, enzyme, tra 100.0
2qcv_A332 Putative 5-dehydro-2-deoxygluconokinase; structura 100.0
2pkf_A334 Adenosine kinase; transferase, S genomics, TB stru 100.0
4e3a_A352 Sugar kinase protein; structural genomics, protein 100.0
1v1a_A309 2-keto-3-deoxygluconate kinase; ATP, structural ge 100.0
2v78_A313 Fructokinase; transferase, PFKB family carbohydrat 100.0
3b1n_A326 Ribokinase, putative; rossmann fold, ATP binding, 100.0
4e84_A352 D-beta-D-heptose 7-phosphate kinase; LPS-heptose b 100.0
2jg1_A330 Tagatose-6-phosphate kinase; phosphoryl transfer, 100.0
3umo_A309 6-phosphofructokinase isozyme 2; glycolysis, trans 100.0
2ajr_A331 Sugar kinase, PFKB family; TM0828, possible 1-phos 100.0
2dcn_A311 Hypothetical fructokinase; 2-keto-3-deoxygluconate 100.0
4e69_A328 2-dehydro-3-deoxygluconokinase; putative sugar kin 100.0
2f02_A323 Tagatose-6-phosphate kinase; LACC, structural geno 100.0
3cqd_A309 6-phosphofructokinase isozyme 2; phosphofructokina 100.0
3ie7_A320 LIN2199 protein; phosphofructokinases, transferase 100.0
2hlz_A312 Ketohexokinase; non-protein kinase, creatine kinas 100.0
3loo_A365 Anopheles gambiae adenosine kinase; AP4A, P4-DI(ad 100.0
1tyy_A339 Putative sugar kinase; ribokinase fold, alpha/beta 100.0
3otx_A347 Adenosine kinase, putative; AP5A, transferase-tran 100.0
3lhx_A319 Ketodeoxygluconokinase; structural genomics, PSI-2 100.0
3uq6_A372 Adenosine kinase, putative; ribokinase, transferas 100.0
2jg5_A306 Fructose 1-phosphate kinase; 1-phosphofructokinase 100.0
2abq_A306 Fructose 1-phosphate kinase; dimer, structural gen 100.0
3ewm_A313 Uncharacterized sugar kinase PH1459; carbohydrate 100.0
4gm6_A351 PFKB family carbohydrate kinase; enzyme function i 100.0
1bx4_A345 Protein (adenosine kinase); human adenosine kinase 100.0
3bf5_A306 Ribokinase related protein; 10640157, putative rib 100.0
2afb_A351 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro- 100.0
2abs_A383 Adenosine kinase, AK; ribokinase fold, alpha/beta, 100.0
2qhp_A296 Fructokinase; NP_810670.1, PFKB family carbohydrat 100.0
3kd6_A313 Carbohydrate kinase, PFKB family; nucleoside kinas 100.0
1vk4_A298 PFKB carbohydrate kinase TM0415; structural genomi 100.0
2yxt_A312 Pyridoxal kinase; beta sheet with alpha helix, met 99.92
1jxh_A288 Phosphomethylpyrimidine kinase; THID, ribokinase f 99.9
2ddm_A283 Pyridoxine kinase; pyridoxal kinase, ribokinase, p 99.9
1ub0_A258 THID, phosphomethylpyrimidine kinase; thiamin bios 99.89
2i5b_A271 Phosphomethylpyrimidine kinase; ADP complex, PDXK, 99.86
3pzs_A289 PM kinase, pyridoxamine kinase; structural genomic 99.79
3h74_A282 Pyridoxal kinase; PSI-II, structural genomics, pro 99.77
3mbh_A291 Putative phosphomethylpyrimidine kinase; structura 99.76
3zs7_A300 Pyridoxal kinase; transferase, sleeping sickness; 99.72
1ekq_A272 Hydroxyethylthiazole kinase; alpha-beta, transfera 99.67
3rm5_A 550 Hydroxymethylpyrimidine/phosphomethylpyrimidine K 99.55
1v8a_A265 Hydroxyethylthiazole kinase; alpha-beta, ATP bindi 99.33
3bgk_A311 SMU.573, putative uncharacterized protein; alpha/b 99.16
3rpz_A279 ADP/ATP-dependent NAD(P)H-hydrate dehydratase; str 99.12
2r3b_A310 YJEF-related protein; putative kinase in the ribok 99.08
3rss_A502 Putative uncharacterized protein; unknown function 99.0
3dzv_A273 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_ 98.96
3drw_A474 ADP-specific phosphofructokinase; AMP, GLYC kinase 98.68
3nl6_A540 Thiamine biosynthetic bifunctional enzyme; thiamin 98.4
3hpd_A265 Hydroxyethylthiazole kinase; alpha-beta, ATP bindi 98.35
3k5w_A475 Carbohydrate kinase; 11206B,helicobacter pylori,PS 98.15
1ua4_A455 Glucokinase, ADP-dependent glucokinase; transferas 98.05
1l2l_A457 ADP-dependent glucokinase; ADP glucokinase APO, tr 97.86
1gc5_A467 ADP-dependent glucokinase; ALFA/beta sandwichs, in 97.8
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus} Back     alignment and structure
Probab=100.00  E-value=1.3e-52  Score=389.39  Aligned_cols=301  Identities=29%  Similarity=0.497  Sum_probs=269.6

Q ss_pred             CCCEEEEccceeeeeeccCCCCCCCCee-eeCcceecCCChHHHHHHHHHHcCCCceEEEEecCCccHHHHHHHHHhCCC
Q 017101           67 PPPLVVVGSANFDIYVEIDRLPKVGETV-AAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGV  145 (377)
Q Consensus        67 ~~~I~viG~~~vD~~~~v~~~p~~~~~~-~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~G~~i~~~l~~~gV  145 (377)
                      |++|+|+|++++|+++.++++|.+++.. ........+||++.|+|+++++||.++.++|.+|+|.+|+++++.|++.||
T Consensus         2 m~~v~viG~~~~D~~~~~~~~p~~g~~~~~~~~~~~~~GG~~~NvA~~la~lG~~~~~~~~vG~D~~g~~i~~~l~~~gv   81 (304)
T 3ry7_A            2 TNKVVILGSTNVDQFLTVERYAQPGETLHVEEAQKAFGGGKGANQAIATARMQADTTFITKIGTDGVADFILEDFKVAHI   81 (304)
T ss_dssp             CCEEEEECCCEEEEEEECSSCCCTTCCCCCSSCCEEEEECHHHHHHHHHHHTTCEEEEECEEESSCTTHHHHHHHHHTTC
T ss_pred             CCcEEEEccceeEEEEeccCCCCCCCceecccceeecCCCHHHHHHHHHHHCCCCeEEEEEeCCChHHHHHHHHHHHcCC
Confidence            4689999999999999999999999888 888889999999999999999999999999999999999999999999999


Q ss_pred             CcccEEeccCCCCCCceEEEEEecCCCeeEEEECCCCCCCCCcCcCchhHHHHhhcCEEEEccCCCHHHHHHHHHHHHhC
Q 017101          146 RLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSA  225 (377)
Q Consensus       146 d~~~v~~~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~~  225 (377)
                      +++++.+.  ++.+|+.++++++++|+++++.+.+++....++.+. ...+.++.++++++++..+.+.+.++++.++++
T Consensus        82 ~~~~v~~~--~~~~T~~~~~~~~~~g~~~~~~~~ga~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~a~~~  158 (304)
T 3ry7_A           82 DTSYIIKT--AEAKTGQAFITVNAEGQNTIYVYGGANMTMTPEDVI-NAKDAIINADFVVAQLEVPIPAIISAFEIAKAH  158 (304)
T ss_dssp             BCTTCEEE--SSSCCEEEEEEECSSCCEEEEEECGGGGGCCHHHHH-TTHHHHHTCSEEEEETTSCHHHHHHHHHHHHHT
T ss_pred             cchhEEEc--CCCCCcEEEEEECCCCCEEEEEecCchhcCCHHHHH-HHHHHhccCCEEEEcCCCCHHHHHHHHHHHHHc
Confidence            99999887  778999999999989999998887765443332221 223568899999999888888899999999999


Q ss_pred             CCcEEEcCCCCCCCChhhhhccCceeccCHHHHhhccCCCCCCHHHHHHHHHHHHhcCCCEEEEeeCCCCeEEEEeCCee
Q 017101          226 GVPVIFDAGGMDAPIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP  305 (377)
Q Consensus       226 g~~v~~D~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~  305 (377)
                      ++++++|++.. ......+++++|++++|++|++.++|....+.+++.++++.+++.|++.|+||+|++|++++.. ++.
T Consensus       159 ~~~v~~D~~~~-~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~-~~~  236 (304)
T 3ry7_A          159 GVTTVLNPAPA-KALPNELLSLIDIIVPNETEAELLSGIKVTNEQSMKDNANYFLSIGIKTVLITLGKQGTYFATK-NQS  236 (304)
T ss_dssp             TCEEEEECCSC-CCCCHHHHTTCSEECCBHHHHHHHHSCCCCSHHHHHHHHHHHHHTTCCEEEEECGGGCEEEECS-SCE
T ss_pred             CCEEEEeCCcc-ccccHHHHHhCCEEecCHHHHHHHhCCCCCChhHHHHHHHHHHHcCCCEEEEEeCCCceEEEEC-Cee
Confidence            99999999875 3566789999999999999999999987777778889999999999999999999999987754 457


Q ss_pred             EEeccCCCCcccCccCchHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 017101          306 IKQSIIPAARVIDTTGAGDTFTASFAVGFVEG-KSREECLRFAAAAASLCVQVKGAIPSMPDRKSVLNL  373 (377)
Q Consensus       306 ~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g-~~l~~al~~a~~aAa~~~~~~G~~~~~p~~e~i~~~  373 (377)
                      +++|++ +++++|||||||+|.|||+++|++| +++++|+++|+++|+++|++.|+.+++|+++|++++
T Consensus       237 ~~~~~~-~v~~vdttGAGDaf~a~~~~~l~~g~~~~~~a~~~A~~~aa~~~~~~G~~~~~p~~~ev~~~  304 (304)
T 3ry7_A          237 QHIEAY-KVNAIDTTAAGDTFIGAFVSRLNKSQDNLADAIDFGNKASSLTVQKHGAQASIPLLEEVNQV  304 (304)
T ss_dssp             EEECCS-SCCSSCCSSHHHHHHHHHHHHCCTTCTTHHHHHHHHHHHHHTTSCCCCTGGGCCCHHHHHTC
T ss_pred             EEecCC-CcccCCCCCchHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCCCCccccCCCHHHHhhC
Confidence            788887 5789999999999999999999999 999999999999999999999999999999999864
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A* Back     alignment and structure
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1 Back     alignment and structure
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens} Back     alignment and structure
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str} Back     alignment and structure
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1 Back     alignment and structure
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A* Back     alignment and structure
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str} Back     alignment and structure
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A* Back     alignment and structure
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A Back     alignment and structure
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A Back     alignment and structure
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A* Back     alignment and structure
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0 Back     alignment and structure
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis} Back     alignment and structure
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A* Back     alignment and structure
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii} Back     alignment and structure
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP} Back     alignment and structure
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A* Back     alignment and structure
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125} Back     alignment and structure
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A* Back     alignment and structure
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A* Back     alignment and structure
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A Back     alignment and structure
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A* Back     alignment and structure
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A* Back     alignment and structure
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A* Back     alignment and structure
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A* Back     alignment and structure
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A* Back     alignment and structure
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1 Back     alignment and structure
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A* Back     alignment and structure
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A* Back     alignment and structure
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A* Back     alignment and structure
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A* Back     alignment and structure
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A Back     alignment and structure
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A Back     alignment and structure
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae} Back     alignment and structure
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A* Back     alignment and structure
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A* Back     alignment and structure
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri} Back     alignment and structure
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A* Back     alignment and structure
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus} Back     alignment and structure
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1 Back     alignment and structure
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A* Back     alignment and structure
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601} Back     alignment and structure
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A* Back     alignment and structure
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728} Back     alignment and structure
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1 Back     alignment and structure
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A* Back     alignment and structure
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum} Back     alignment and structure
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1 Back     alignment and structure
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A* Back     alignment and structure
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A* Back     alignment and structure
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A* Back     alignment and structure
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2 Back     alignment and structure
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis} Back     alignment and structure
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A* Back     alignment and structure
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A* Back     alignment and structure
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A* Back     alignment and structure
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei} Back     alignment and structure
>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A* Back     alignment and structure
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae} Back     alignment and structure
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A Back     alignment and structure
>3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans} Back     alignment and structure
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A Back     alignment and structure
>2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A Back     alignment and structure
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A* Back     alignment and structure
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis} Back     alignment and structure
>3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A Back     alignment and structure
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A* Back     alignment and structure
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii} Back     alignment and structure
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori} Back     alignment and structure
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3 Back     alignment and structure
>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3 Back     alignment and structure
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 377
d1vm7a_299 c.72.1.1 (A:) Ribokinase {Thermotoga maritima [Tax 6e-53
d1rkda_306 c.72.1.1 (A:) Ribokinase {Escherichia coli [TaxId: 3e-52
d2fv7a1308 c.72.1.1 (A:15-322) Ribokinase {Human (Homo sapien 9e-50
d2ajra1319 c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {T 2e-38
d1v19a_302 c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Ther 5e-38
d2afba1333 c.72.1.1 (A:-2-330) 2-keto-3-deoxygluconate kinase 1e-37
d2f02a1313 c.72.1.1 (A:1-313) Tagatose-6-phosphate kinase Lac 4e-35
d1vk4a_288 c.72.1.1 (A:) Hypothetical protein TM0415 {Thermot 4e-35
d2dcna1308 c.72.1.1 (A:2-309) Hypothetical fructokinase ST247 8e-34
d2abqa1306 c.72.1.1 (A:1-306) Fructose 1-phosphate kinase Fru 8e-34
d1tyya_304 c.72.1.1 (A:) Aminoimidazole riboside kinase {Salm 1e-32
d1bx4a_342 c.72.1.1 (A:) Adenosine kinase {Human (Homo sapien 3e-30
d2absa1350 c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma g 2e-27
d1vi9a_288 c.72.1.5 (A:) Pyridoxamine kinase {Escherichia col 2e-14
d1lhpa_309 c.72.1.5 (A:) Pyridoxal kinase {Sheep (Ovis aries) 4e-09
d1ub0a_258 c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyri 5e-08
d1jxha_266 c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyri 1e-06
d1v8aa_264 c.72.1.2 (A:) Hydroxyethylthiazole kinase (THZ kin 5e-05
d1ekqa_269 c.72.1.2 (A:) Hydroxyethylthiazole kinase (THZ kin 8e-05
>d1vm7a_ c.72.1.1 (A:) Ribokinase {Thermotoga maritima [TaxId: 2336]} Length = 299 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: Ribokinase
species: Thermotoga maritima [TaxId: 2336]

 Score =  175 bits (444), Expect = 6e-53
 Identities = 104/306 (33%), Positives = 148/306 (48%), Gaps = 15/306 (4%)

Query: 71  VVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHP-TYFVGQVGE 129
            VVGS+N DI +++D   K GET  A       GGKGANQA   AK+      FV  +G 
Sbjct: 6   SVVGSSNIDIVLKVDHFTKPGETQKAIEMNVFPGGKGANQAVTVAKIGEKGCRFVTCIGN 65

Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
           D    L+ +           +       +PTG A + +   GQN III  G N     E 
Sbjct: 66  DDYSDLLIENYEKL-----GITGYIRVSLPTGRAFIEVDKTGQNRIIIFPGANAELKKE- 119

Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
               D   + ++ I+LLQ EIP    +   + A+     VIFD       I +E+  ++D
Sbjct: 120 --LIDWNTLSESDILLLQNEIPFETTL---ECAKRFNGIVIFDPAPAQ-GINEEIFQYLD 173

Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
            L+PNE E+  L+      +  + +A  K  ++GV+ V+VKLG KG  L  + E   K  
Sbjct: 174 YLTPNEKEIEALSKDFFGEFLTVEKAAEKFLELGVKNVIVKLGDKGVLLVNKNE--KKHF 231

Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
                + +DTT AGD F  +FAV   EGK+ EE + F  AAA++ V   GA  S+P R+ 
Sbjct: 232 PTFKVKAVDTTAAGDVFNGAFAVALSEGKNPEEAVIFGTAAAAISVTRLGAQSSIPAREE 291

Query: 370 VLNLLQ 375
           V   L+
Sbjct: 292 VEAFLK 297
>d1rkda_ c.72.1.1 (A:) Ribokinase {Escherichia coli [TaxId: 562]} Length = 306 Back     information, alignment and structure
>d2fv7a1 c.72.1.1 (A:15-322) Ribokinase {Human (Homo sapiens) [TaxId: 9606]} Length = 308 Back     information, alignment and structure
>d2ajra1 c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {Thermotoga maritima [TaxId: 2336]} Length = 319 Back     information, alignment and structure
>d1v19a_ c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Thermus thermophilus [TaxId: 274]} Length = 302 Back     information, alignment and structure
>d2afba1 c.72.1.1 (A:-2-330) 2-keto-3-deoxygluconate kinase {Thermotoga maritima, TM0067 [TaxId: 2336]} Length = 333 Back     information, alignment and structure
>d2f02a1 c.72.1.1 (A:1-313) Tagatose-6-phosphate kinase LacC {Enterococcus faecalis [TaxId: 1351]} Length = 313 Back     information, alignment and structure
>d1vk4a_ c.72.1.1 (A:) Hypothetical protein TM0415 {Thermotoga maritima [TaxId: 2336]} Length = 288 Back     information, alignment and structure
>d2dcna1 c.72.1.1 (A:2-309) Hypothetical fructokinase ST2478 {Sulfolobus tokodaii [TaxId: 111955]} Length = 308 Back     information, alignment and structure
>d2abqa1 c.72.1.1 (A:1-306) Fructose 1-phosphate kinase FruB {Bacillus halodurans [TaxId: 86665]} Length = 306 Back     information, alignment and structure
>d1tyya_ c.72.1.1 (A:) Aminoimidazole riboside kinase {Salmonella typhimurium [TaxId: 90371]} Length = 304 Back     information, alignment and structure
>d1bx4a_ c.72.1.1 (A:) Adenosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 342 Back     information, alignment and structure
>d2absa1 c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma gondii [TaxId: 5811]} Length = 350 Back     information, alignment and structure
>d1vi9a_ c.72.1.5 (A:) Pyridoxamine kinase {Escherichia coli [TaxId: 562]} Length = 288 Back     information, alignment and structure
>d1lhpa_ c.72.1.5 (A:) Pyridoxal kinase {Sheep (Ovis aries) [TaxId: 9940]} Length = 309 Back     information, alignment and structure
>d1ub0a_ c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) {Thermus thermophilus [TaxId: 274]} Length = 258 Back     information, alignment and structure
>d1jxha_ c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) {Salmonella typhimurium [TaxId: 90371]} Length = 266 Back     information, alignment and structure
>d1v8aa_ c.72.1.2 (A:) Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 264 Back     information, alignment and structure
>d1ekqa_ c.72.1.2 (A:) Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Bacillus subtilis [TaxId: 1423]} Length = 269 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query377
d1rkda_306 Ribokinase {Escherichia coli [TaxId: 562]} 100.0
d2fv7a1308 Ribokinase {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1vm7a_299 Ribokinase {Thermotoga maritima [TaxId: 2336]} 100.0
d1v19a_302 2-keto-3-deoxygluconate kinase {Thermus thermophil 100.0
d2afba1333 2-keto-3-deoxygluconate kinase {Thermotoga maritim 100.0
d2abqa1306 Fructose 1-phosphate kinase FruB {Bacillus halodur 100.0
d2ajra1319 Putative sugar kinase TM0828 {Thermotoga maritima 100.0
d2f02a1313 Tagatose-6-phosphate kinase LacC {Enterococcus fae 100.0
d2dcna1308 Hypothetical fructokinase ST2478 {Sulfolobus tokod 100.0
d1tyya_304 Aminoimidazole riboside kinase {Salmonella typhimu 100.0
d1bx4a_342 Adenosine kinase {Human (Homo sapiens) [TaxId: 960 100.0
d2absa1350 Adenosine kinase {Toxoplasma gondii [TaxId: 5811]} 100.0
d1vk4a_288 Hypothetical protein TM0415 {Thermotoga maritima [ 100.0
d1vi9a_288 Pyridoxamine kinase {Escherichia coli [TaxId: 562] 99.67
d1ub0a_258 4-amino-5-hydroxymethyl-2-methylpyrimidine phospha 99.51
d1lhpa_309 Pyridoxal kinase {Sheep (Ovis aries) [TaxId: 9940] 99.38
d1jxha_266 4-amino-5-hydroxymethyl-2-methylpyrimidine phospha 99.35
d1ekqa_269 Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Ba 98.79
d1kyha_275 Hypothetical protein YxkO {Bacillus subtilis [TaxI 98.66
d1v8aa_264 Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Ar 98.56
d1u2xa_450 ADP-specific phosphofructokinase {Pyrococcus horik 98.22
d2ax3a1278 Hypothetical protein TM0922, C-terminal domain {Th 98.19
d1ua4a_454 ADP-dependent glucokinase {Archaeon Pyrococcus fur 97.81
d1gc5a_467 ADP-dependent glucokinase {Archaeon Thermococcus l 97.45
d1l2la_451 ADP-dependent glucokinase {Archaeon Thermococcus l 97.41
d1p3da196 UDP-N-acetylmuramate-alanine ligase MurC {Haemophi 82.31
>d1rkda_ c.72.1.1 (A:) Ribokinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: Ribokinase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=7.4e-46  Score=340.20  Aligned_cols=303  Identities=32%  Similarity=0.488  Sum_probs=257.0

Q ss_pred             CEEEEccceeeeeeccCCCCCCCCeeeeCcceecCCChHHHHHHHHHHcCCCceEEEEecCCccHHHHHHHHHhCCCCcc
Q 017101           69 PLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGVRLD  148 (377)
Q Consensus        69 ~I~viG~~~vD~~~~v~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~G~~i~~~l~~~gVd~~  148 (377)
                      +|+|+|++++|+++.++++|.+++++...+....+||++.|+|++|++||.++.++|.+|+|..|+.+++.|++.||++.
T Consensus         3 ~IlviG~~~~D~~~~v~~~p~~g~~~~~~~~~~~~GG~~~NvA~~l~~lG~~v~~~~~vG~d~~~~~~~~~l~~~gi~~~   82 (306)
T d1rkda_           3 SLVVLGSINADHILNLQSFPTPGETVTGNHYQVAFGGKGANQAVAAGRSGANIAFIACTGDDSIGESVRQQLATDNIDIT   82 (306)
T ss_dssp             EEEEECCCEEEEEEECSSCCCTTCCCCCCCEEEEEECHHHHHHHHHHHHTCEEEEEEEEESSTTHHHHHHHHHTTTEECT
T ss_pred             EEEEEceeeEEEEEeeCCCCCCCceEeeceEEEecCCHHHHHHHHHHHcCCCEEEEEEECCccccchhhhcccccccccc
Confidence            69999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cEEeccCCCCCCceEEEEEecCCCeeEEEECCCCCCCCCcCcCchhHHHHhhcCEEEEccCCCHHHHHHHHHHHHhCCCc
Q 017101          149 YMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVP  228 (377)
Q Consensus       149 ~v~~~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~  228 (377)
                      ++...  +...|+.+..+++.++++............... ..............++.......+..........+.+..
T Consensus        83 ~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (306)
T d1rkda_          83 PVSVI--KGESTGVALIFVNGEGENVIGIHAGANAALSPA-LVEAQRERIANASALLMQLESPLESVMAAAKIAHQNKTI  159 (306)
T ss_dssp             TEEEE--TTCCCEEEEEEECTTSCEEEEEECGGGGGCCHH-HHHTTHHHHHHCSEEEECSSSCHHHHHHHHHHHHHTTCE
T ss_pred             ccccc--cccccccceeeEeecCcceeeeeccchhhhhhh-hhhhhHhhhhhheeeeecccchhhhhhhHHHHhhhcccc
Confidence            99988  777888999999888998877665443222111 111122334445566665666666666666677777777


Q ss_pred             EEEcCCCCCCCChhhhhccCceeccCHHHHhhccCCCCCCHHHHHHHHHHHHhcCCCEEEEeeCCCCeEEEEeCCeeEEe
Q 017101          229 VIFDAGGMDAPIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ  308 (377)
Q Consensus       229 v~~D~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~~~  308 (377)
                      ...++... +.....+++++|++++|.+|+..+++.......+...+.+.+.+.+.+.+++|+|++|+.++. +++.+++
T Consensus       160 ~~~~~~~~-~~~~~~~~~~~d~~~~n~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~vivt~G~~g~~~~~-~~~~~~~  237 (306)
T d1rkda_         160 VALNPAPA-RELPDELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIRTVLITLGSRGVWASV-NGEGQRV  237 (306)
T ss_dssp             EEECCCSC-CCCCHHHHTTCSEECCCHHHHHHHHSCCCSSHHHHHHHHHHHHHTTCSEEEEECGGGCEEEEE-TTEEEEE
T ss_pred             cccCchhh-hhhHHHHHhhcccccCCHHHHHHHhCCCcccchhHHHHHHHHhhcCCcEEEEecCCceEEEee-cCceEEe
Confidence            77777543 456678899999999999999999998877766777777778888999999999999998765 4567888


Q ss_pred             ccCCCCcccCccCchHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHhhC
Q 017101          309 SIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKSVLNLLQYA  377 (377)
Q Consensus       309 ~~~~~~~vvdttGAGDaF~ag~l~~l~~g~~l~~al~~a~~aAa~~~~~~G~~~~~p~~e~i~~~l~~~  377 (377)
                      |++ +++++||+||||+|+|||+++|.+|+++++|+++|+++|+++|++.|+.+++|+++||+++|++.
T Consensus       238 ~~~-~~~vvDt~GAGDaf~Ag~l~~l~~g~~~~~a~~~a~~~aa~~v~~~G~~~~~p~~~ev~~~l~~~  305 (306)
T d1rkda_         238 PGF-RVQAVDTIAAGDTFNGALITALLEEKPLPEAIRFAHAAAAIAVTRKGAQPSVPWREEIDAFLDRQ  305 (306)
T ss_dssp             CCC-CCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSSGGGCCCHHHHHHHHHTC
T ss_pred             CCc-cCccccCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHhc
Confidence            887 57899999999999999999999999999999999999999999999999999999999999873
>d2fv7a1 c.72.1.1 (A:15-322) Ribokinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1vm7a_ c.72.1.1 (A:) Ribokinase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1v19a_ c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2abqa1 c.72.1.1 (A:1-306) Fructose 1-phosphate kinase FruB {Bacillus halodurans [TaxId: 86665]} Back     information, alignment and structure
>d2ajra1 c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2f02a1 c.72.1.1 (A:1-313) Tagatose-6-phosphate kinase LacC {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d2dcna1 c.72.1.1 (A:2-309) Hypothetical fructokinase ST2478 {Sulfolobus tokodaii [TaxId: 111955]} Back     information, alignment and structure
>d1tyya_ c.72.1.1 (A:) Aminoimidazole riboside kinase {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1bx4a_ c.72.1.1 (A:) Adenosine kinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2absa1 c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma gondii [TaxId: 5811]} Back     information, alignment and structure
>d1vk4a_ c.72.1.1 (A:) Hypothetical protein TM0415 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1vi9a_ c.72.1.5 (A:) Pyridoxamine kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ub0a_ c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1lhpa_ c.72.1.5 (A:) Pyridoxal kinase {Sheep (Ovis aries) [TaxId: 9940]} Back     information, alignment and structure
>d1jxha_ c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1ekqa_ c.72.1.2 (A:) Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1kyha_ c.72.1.4 (A:) Hypothetical protein YxkO {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1v8aa_ c.72.1.2 (A:) Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1u2xa_ c.72.1.3 (A:) ADP-specific phosphofructokinase {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d2ax3a1 c.72.1.4 (A:212-489) Hypothetical protein TM0922, C-terminal domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ua4a_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1gc5a_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Thermococcus litoralis [TaxId: 2265]} Back     information, alignment and structure
>d1l2la_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Thermococcus litoralis [TaxId: 2265]} Back     information, alignment and structure
>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure