Citrus Sinensis ID: 017167

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370------
Protein Sequence
MADTAGSVSTRRMCSVPEKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPNRWMSTCMLSFWIQMFVCLTAICSGPQFTYILPKYV
Secondary Structure (PSIPRED)
cccccccHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcHHHHHHHHHHHHHHHHcEEccccccccEEHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEcccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHEEEccccccccHHHHHHHHHHHccEEEccccEEEEccccc
Secondary Structure Prediction (SSPRO)
cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHEEEEHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEccccc
Coil and Loop (DISEMBL)
madtagsvstrrmcsvpEKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFayflekkerpamTLNFALQFILLALVGITANQGFYLlglentsptfasaIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVitlykgptiyspapplnqiqpdsltSTIFLSlgdakgknwTLGCVYLIGHClswsgwlvmqapvlkkyparlsvtAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCidrggpvfvAVYQPVQTLVVAIMASFALgeefylggyvpatsparsillpnrwmsTCMLSFWIQMFVCLTaicsgpqftyilpkyv
Flexible Loop (DISEMBL)
madtagsvstrrmcSVPEKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPNRWMSTCMLSFWIQMFVCLTAICSGPQFTYILPKYV
Low Complexity Region (SEG)
MADTAGSVSTRRMCSVPEKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIafllllpfayflEKKERPAMTLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPNRWMSTCMLSFWIQMFVCLTAICSGPQFTYILPKYV
Disordered region (IsUnstruct)
*************CSVPEKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPNRWMSTCMLSFWIQMFVCLTAICSGPQFTYILP***
Disordered Region (DISOPRED)
*****************EKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPP*******************AKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPNRW*************VCLTAICSGPQFTYILPKYV
Disordered Region (DISEMBL)
***********RMCSVPEKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPNRWMSTCMLSFWIQMFVCLTAICSGPQFTYILPKYV
Disordered Region (DISPRO)
*********TRRMCSVPEKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAP***********************KNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPNRWMSTCMLSFWIQMFVCLTAICSGPQFTYILPKYV
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MADTAGSVSTRRMCSVPEKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPNRWMSTCMLSFWIQMFVCLTAICSGPQFTYILPKYV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	376	2.2.26 [Sep-21-2011]
Q94AP3	389	Protein WALLS ARE THIN 1	yes	no	0.869	0.840	0.769	1e-147
Q6J163	410	Auxin-induced protein 5NG	N/A	no	0.837	0.768	0.643	1e-119
F4J9A3	369	WAT1-related protein At3g	no	no	0.827	0.842	0.594	1e-110
Q9LV20	383	WAT1-related protein At3g	no	no	0.811	0.796	0.571	1e-100
O80638	374	WAT1-related protein At2g	no	no	0.781	0.786	0.396	2e-57
Q9SUF1	384	WAT1-related protein At4g	no	no	0.803	0.786	0.392	2e-56
Q9M0B8	373	WAT1-related protein At4g	no	no	0.784	0.790	0.393	4e-56
Q9FL41	402	WAT1-related protein At5g	no	no	0.816	0.763	0.378	6e-55
Q5PP32	385	WAT1-related protein At3g	no	no	0.813	0.794	0.410	7e-55
Q8GXB4	374	WAT1-related protein At1g	no	no	0.797	0.802	0.379	6e-54

>sp|Q94AP3|WAT1_ARATH Protein WALLS ARE THIN 1 OS=Arabidopsis thaliana GN=WAT1 PE=1 SV=1

 Score =  521 bits (1343), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 254/330 (76%), Positives = 288/330 (87%), Gaps = 3/330 (0%)

Query: 1   MADTAGSVSTRRMCSVPEKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNII 60
           MAD   +   R +  VPEKLQLH+AM+ LQFGYAGFHVVSRAALNMGISKLVFPVYRNII
Sbjct: 1   MADNTDN--RRSLWGVPEKLQLHIAMLTLQFGYAGFHVVSRAALNMGISKLVFPVYRNII 58

Query: 61  AFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQN 120
           A LLLLPFAYFLEKKERPA+TLNF +QF  LAL+GITANQGFYLLGL+NTSPTFAS++QN
Sbjct: 59  ALLLLLPFAYFLEKKERPAITLNFLIQFFFLALIGITANQGFYLLGLDNTSPTFASSMQN 118

Query: 121 SVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQI 180
           SVPAITFLMAA+ RIEKVR++R+DGI+K++GT  CVAGA+VITLYKGPTIY+PA  L+  
Sbjct: 119 SVPAITFLMAALLRIEKVRINRRDGISKILGTALCVAGASVITLYKGPTIYTPASHLHA- 177

Query: 181 QPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTC 240
              +  S +   LG+A  KNWTLGC+YLIGHCLSWSGWLV QAPVLK YPARLSVT+YTC
Sbjct: 178 HLLTTNSAVLAPLGNAAPKNWTLGCIYLIGHCLSWSGWLVFQAPVLKSYPARLSVTSYTC 237

Query: 241 FFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVA 300
           FFG+IQF+IIAA  ER+  AW+FH+G E+F+ILYAG+VASGIAFAVQIWCIDRGGPVFVA
Sbjct: 238 FFGIIQFLIIAAFCERDSQAWVFHSGWELFTILYAGIVASGIAFAVQIWCIDRGGPVFVA 297

Query: 301 VYQPVQTLVVAIMASFALGEEFYLGGYVPA 330
           VYQPVQTLVVAIMAS ALGEEFYLGG + A
Sbjct: 298 VYQPVQTLVVAIMASIALGEEFYLGGIIGA 327

Required for secondary wall formation in fibers, especially in short days conditions. Promotes indole metabolism and transport (e.g. tryptophan, neoglucobrassicin and auxin (indole-3-acetic acid)). May prevent salicylic-acid (SA) accumulation.
Arabidopsis thaliana (taxid: 3702)

>sp|Q6J163|5NG4_PINTA Auxin-induced protein 5NG4 OS=Pinus taeda PE=2 SV=1

 Score =  429 bits (1104), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 211/328 (64%), Positives = 265/328 (80%), Gaps = 13/328 (3%)

Query: 5   AGSVSTRRMCSVPEKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLL 64
           A ++  R    + E+++LH AM+ALQFGYAGFH+VSRAALNMG+SK+VFPVYRNI+A +L
Sbjct: 2   ASNIMQRCNVFMSERVKLHAAMLALQFGYAGFHIVSRAALNMGVSKVVFPVYRNILALML 61

Query: 65  LLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPA 124
           + P AYFLEKKERPA+TL+F +QF LLAL GIT       L +    PTFASAIQNSVPA
Sbjct: 62  IGPCAYFLEKKERPALTLSFLIQFFLLALCGITGQSRILSLRIVLHIPTFASAIQNSVPA 121

Query: 125 ITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQI-QPD 183
           ITF+MAA  R+EKV + R+DG+AK++GT+ CV+GAT+ITLYKGP       P+  I +P+
Sbjct: 122 ITFIMAAALRLEKVHISRRDGLAKIIGTVACVSGATIITLYKGP-------PITHIWRPN 174

Query: 184 -SLTSTIFLSLG----DAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAY 238
             +T++ F +       AK +NWTLGC+YL+G+CL+WSGW+V+QAPVLK+YPARLSVT++
Sbjct: 175 LEVTASYFKAFQGNDLSAKSENWTLGCIYLLGNCLAWSGWIVLQAPVLKRYPARLSVTSF 234

Query: 239 TCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVF 298
           TCFFG+IQF+IIAA FE +L+ W  H+GGE+F+ILYAG VASGIAF+VQIWCIDRGGPVF
Sbjct: 235 TCFFGVIQFLIIAAFFETDLEHWKIHSGGELFTILYAGFVASGIAFSVQIWCIDRGGPVF 294

Query: 299 VAVYQPVQTLVVAIMASFALGEEFYLGG 326
           VAVYQPVQT+ VAIMAS  LGE+FYLGG
Sbjct: 295 VAVYQPVQTIAVAIMASIILGEQFYLGG 322

Pinus taeda (taxid: 3352)

>sp|F4J9A3|WTR26_ARATH WAT1-related protein At3g53210 OS=Arabidopsis thaliana GN=At3g53210 PE=2 SV=1

 Score =  397 bits (1020), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 189/318 (59%), Positives = 245/318 (77%), Gaps = 7/318 (2%)

Query: 13  MCSVPEKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFL 72
           M  +PE+ +LH+AMV  Q GYAG HV+ R ALN+G+SKLVFP+YR I+AF +L P AYFL
Sbjct: 1   MSPIPERAKLHIAMVVFQTGYAGNHVIMRYALNLGVSKLVFPLYRTIVAFSVLAPSAYFL 60

Query: 73  EKKERPAMTLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAI 132
           EKKERPAM ++F +QF LL LVGIT NQGFY+ GL+NTSPTFASA +N VPA++FLMAA+
Sbjct: 61  EKKERPAMKISFLIQFFLLGLVGITLNQGFYIFGLDNTSPTFASATENVVPAVSFLMAAL 120

Query: 133 FRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLS 192
             IEKV   RKDGIAKVVGT+  VAG+ VITLYKGPTIY P+  LN +       TI   
Sbjct: 121 LGIEKVEWKRKDGIAKVVGTIVSVAGSLVITLYKGPTIYQPS--LNIV-----NQTIKPE 173

Query: 193 LGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAA 252
             + + KNWTLGC+ L+GHCL WS W+V+Q+P+LKKYPAR S  +Y+CFF +IQF  I+A
Sbjct: 174 EAEEENKNWTLGCLCLMGHCLCWSSWIVLQSPLLKKYPARFSFVSYSCFFAVIQFFGISA 233

Query: 253 IFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAI 312
            FER+L+ W   +GGE++++LY G+V S + FA+QI+ ++RGGP+FV+ Y P+QTL+ A+
Sbjct: 234 YFERDLERWKIISGGELYALLYTGLVGSAMVFAIQIYVVERGGPLFVSAYLPLQTLIAAV 293

Query: 313 MASFALGEEFYLGGYVPA 330
           +A+ ALGE FYLGG + A
Sbjct: 294 LATLALGEHFYLGGLIGA 311

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LV20|WTR17_ARATH WAT1-related protein At3g18200 OS=Arabidopsis thaliana GN=At3g18200 PE=2 SV=1

 Score =  365 bits (937), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 180/315 (57%), Positives = 241/315 (76%), Gaps = 10/315 (3%)

Query: 16  VPEKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKK 75
           V EK++L +A++ LQF +AGFH+VSR ALN+G+SK+V+PVYRN++A LL+ PFAYF EKK
Sbjct: 29  VSEKVKLVVALITLQFCFAGFHIVSRVALNIGVSKVVYPVYRNLLALLLIGPFAYFFEKK 88

Query: 76  ERPAMTLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRI 135
           ERP +T++   QF  LAL+GITANQGFYLLGL   +PTFASA+QNSVPAITF+MA   R+
Sbjct: 89  ERPPLTISLLAQFFFLALIGITANQGFYLLGLYYATPTFASAMQNSVPAITFIMACALRL 148

Query: 136 EKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLGD 195
           E + L RK G+AKV+GTL  + GATVITLY+G  I+     LN +Q + +       +G 
Sbjct: 149 EHIDLVRKHGVAKVLGTLVSIGGATVITLYRGFPIFDQG--LN-MQKEEV-------VGS 198

Query: 196 AKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFE 255
               + TLG +YL+GHCLSW+GW+V+QAPVLK+YPA+L++T++TCFFGLIQF++IA   E
Sbjct: 199 DNSHSLTLGWLYLMGHCLSWAGWMVLQAPVLKQYPAKLTLTSFTCFFGLIQFLVIALFVE 258

Query: 256 RNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMAS 315
            +L+ WI  +  E+F+ILYAG++ASG+   +Q WCI + GPVFVAV+QP+QTL+VA MA 
Sbjct: 259 TDLNNWIIVSWEELFTILYAGIIASGLVVYLQTWCIYKSGPVFVAVFQPLQTLLVAAMAF 318

Query: 316 FALGEEFYLGGYVPA 330
             LG++ Y GG V A
Sbjct: 319 LILGDQLYSGGIVGA 333

Arabidopsis thaliana (taxid: 3702)

>sp|O80638|WTR14_ARATH WAT1-related protein At2g39510 OS=Arabidopsis thaliana GN=At2g39510 PE=2 SV=1

 Score =  223 bits (568), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 120/303 (39%), Positives = 181/303 (59%), Gaps = 9/303 (2%)

Query: 24  LAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLN 83
           + +V+LQFGYAG  ++++ ALN G+S  V   YR+I+A + + PFAYFL++K RP MTL+
Sbjct: 10  ITVVSLQFGYAGLSIIAKFALNQGMSPHVLASYRHIVATIFIAPFAYFLDRKIRPKMTLS 69

Query: 84  FALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRK 143
              + +LL L+  T +Q  Y  G++ TS TF +A+ N +PA  F+MA IFR+EKV + + 
Sbjct: 70  IFFKILLLGLLEPTIDQNLYYTGMKYTSATFTAAMTNVLPAFAFIMAWIFRLEKVNVKKI 129

Query: 144 DGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTL 203
              AK++GT+  V GA ++T+ KGP I  P    + I  DS  + +         ++ T 
Sbjct: 130 HSQAKILGTIVTVGGAMLMTVVKGPLIPLPWANPHDIHQDSSNTGV--------KQDLTK 181

Query: 204 GCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFER-NLDAWI 262
           G   +   C+ W+G++ +QA  LK YP  LS+TAY CF G I+  I+A   ER N  AW 
Sbjct: 182 GASLIAIGCICWAGFINLQAITLKSYPVELSLTAYICFLGSIESTIVALFIERGNPSAWA 241

Query: 263 FHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEF 322
            H   ++ + +Y GV+ SGI + VQ   +   GPVFV  + P+  ++VAI+ S  L E  
Sbjct: 242 IHLDSKLLAAVYGGVICSGIGYYVQGVIMKTRGPVFVTAFNPLSMVIVAILGSIILAEVM 301

Query: 323 YLG 325
           +LG
Sbjct: 302 FLG 304

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SUF1|WTR31_ARATH WAT1-related protein At4g08290 OS=Arabidopsis thaliana GN=At4g08290 PE=2 SV=1

 Score =  219 bits (559), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 121/308 (39%), Positives = 182/308 (59%), Gaps = 6/308 (1%)

Query: 18  EKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKER 77
            KL+ +L M+ LQFG AG ++V  A LN G ++ V  VYRN++A L+L PFA   E+K R
Sbjct: 9   HKLRPYLLMIFLQFGAAGTYIVIMATLNQGQNRYVVIVYRNLVAALVLAPFALIFERKVR 68

Query: 78  PAMTLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEK 137
           P MTL+   + + L  +    +QGF  LG+  TS T+ SAI N +P++TF++A I R+EK
Sbjct: 69  PKMTLSVLWKIMALGFLEPVLDQGFGYLGMNMTSATYTSAIMNILPSVTFIIAWILRMEK 128

Query: 138 VRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLGDAK 197
           V +      AK++GTL  + GA V+TLYKGP I  P    N  Q +  T+          
Sbjct: 129 VNIAEVRSKAKIIGTLVGLGGALVMTLYKGPLIPLPWSNPNMDQQNGHTNN------SQD 182

Query: 198 GKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERN 257
             NW +G + ++  C++WSG+ V+Q+  +K YPA LS++A  C  G +Q   +A + ER+
Sbjct: 183 HNNWVVGTLLILLGCVAWSGFYVLQSITIKTYPADLSLSALICLAGAVQSFAVALVVERH 242

Query: 258 LDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFA 317
              W       +F+ LY G+V+SGI + VQ   +   GPVFV  + P+  ++VA++ASF 
Sbjct: 243 PSGWAVGWDARLFAPLYTGIVSSGITYYVQGMVMKTRGPVFVTAFNPLCMILVALIASFI 302

Query: 318 LGEEFYLG 325
           L E+ + G
Sbjct: 303 LHEQIHFG 310

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M0B8|WTR37_ARATH WAT1-related protein At4g30420 OS=Arabidopsis thaliana GN=At4g30420 PE=3 SV=1

 Score =  218 bits (556), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 122/310 (39%), Positives = 183/310 (59%), Gaps = 15/310 (4%)

Query: 24  LAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMT-- 81
           +AM  +Q  YAG  + +RA L  G+S  VF +YR   A + + PF Y   +K + A++  
Sbjct: 1   MAMTMIQLCYAGVTLFARATLVHGLSPRVFILYRQAFATIFIFPFLYLSRRKSKIAISSL 60

Query: 82  --LNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVR 139
              +F+L F L++L+GIT NQ  YL GL  TS +  SA+ N +PAITFL++ +   EK+ 
Sbjct: 61  DLKSFSLIF-LVSLIGITINQNLYLEGLYLTSSSMGSAVGNIIPAITFLISFLAGYEKLN 119

Query: 140 LDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGK 199
           L    G+AK+ GT+ CVAGA  +TL +GP I      LN      +  ++   LG  K +
Sbjct: 120 LRDIRGLAKIAGTILCVAGAISMTLLRGPKI------LNSESALPIAKSV---LGHLKDQ 170

Query: 200 N-WTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNL 258
           N W +GC++L    L WS WL++Q P+   YP  LS++A+ C FG IQ  ++    E++ 
Sbjct: 171 NTWLIGCLFLFSSTLCWSFWLILQVPISAYYPDNLSLSAWMCLFGTIQCAVVTFFLEKDP 230

Query: 259 DAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFAL 318
           +AWI H+  E  + LYAG+ AS ++F VQ W I + GPVF A++ P+ T++V I+A+   
Sbjct: 231 NAWILHSYSEFATCLYAGIGASALSFTVQAWAIAKRGPVFSALFNPLCTVIVTILAALFF 290

Query: 319 GEEFYLGGYV 328
            EE Y G  +
Sbjct: 291 HEEIYTGSLI 300

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FL41|WTR38_ARATH WAT1-related protein At5g07050 OS=Arabidopsis thaliana GN=At5g07050 PE=2 SV=1

 Score =  215 bits (547), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 117/309 (37%), Positives = 187/309 (60%), Gaps = 2/309 (0%)

Query: 23  HLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTL 82
           + AM++LQFGYAG +++++ +LN G+S  V  VYR+ IA  ++ PFA+F E+K +P +T 
Sbjct: 19  YFAMISLQFGYAGMNIITKISLNTGMSHYVLVVYRHAIATAVIAPFAFFFERKAQPKITF 78

Query: 83  NFALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDR 142
           +  +Q  +L L+G   +Q FY +GL+ TSPTF+ A+ N +PA+TF++A +FR+E + L +
Sbjct: 79  SIFMQLFILGLLGPVIDQNFYYMGLKYTSPTFSCAMSNMLPAMTFILAVLFRMEMLDLKK 138

Query: 143 KDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWT 202
               AK+ GT+  VAGA ++T+YKGP +         IQ DS  +    S   +  K + 
Sbjct: 139 LWCQAKIAGTVVTVAGAMLMTIYKGPIVELFWTKYMHIQ-DSSHANTTSSKNSSSDKEFL 197

Query: 203 LGCVYLIGHCLSWSGWLVMQAPVLKKYPA-RLSVTAYTCFFGLIQFMIIAAIFERNLDAW 261
            G + LI   L+W+   V+QA +LK Y   +LS+T   CF G +Q + +  + E N  AW
Sbjct: 198 KGSILLIFATLAWASLFVLQAKILKTYAKHQLSLTTLICFIGTLQAVAVTFVMEHNPSAW 257

Query: 262 IFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEE 321
                  + +  Y+G+VAS I++ VQ   + + GPVF   + P+  ++VA+M SF L E+
Sbjct: 258 RIGWDMNLLAAAYSGIVASSISYYVQGIVMKKRGPVFATAFSPLMMVIVAVMGSFVLAEK 317

Query: 322 FYLGGYVPA 330
            +LGG + A
Sbjct: 318 IFLGGVIGA 326

Arabidopsis thaliana (taxid: 3702)

>sp|Q5PP32|WTR25_ARATH WAT1-related protein At3g45870 OS=Arabidopsis thaliana GN=At3g45870 PE=2 SV=1

 Score =  214 bits (546), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 128/312 (41%), Positives = 191/312 (61%), Gaps = 6/312 (1%)

Query: 18  EKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKER 77
           E  + H+AM+ +Q    G+HV+++ ALN+G+++LVF V+R++IA  +L P AY  +K+ R
Sbjct: 8   EAWKAHVAMIGVQLFNGGYHVITKVALNVGVNQLVFCVFRDLIALSILAPLAYIRDKRTR 67

Query: 78  PAMTLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEK 137
           P +   F L F  L L GI  NQ  +L+GL  T+PT+A+AIQ S+P  TF++A I   E+
Sbjct: 68  PPLNRQFLLAFFFLGLTGIFGNQLLFLIGLNYTNPTYAAAIQPSIPVFTFILALIMGTER 127

Query: 138 VRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIY--SPAPPLNQIQP-DSLTSTIFLS-L 193
           + L + +G AKV GTL CVAGA ++ L++G  ++  + A  L   +   + TS  F+S  
Sbjct: 128 LNLFKLEGQAKVGGTLICVAGAVLMVLFRGLALFGETEAESLGHGESRHTETSGHFMSGF 187

Query: 194 GDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAI 253
            +  G+ W LG + LIG+C   + +L +QAPVLKKYPA LSVTAY+ FFG + FM+ +A 
Sbjct: 188 FNGLGR-WNLGVLCLIGNCTCMAAFLAIQAPVLKKYPANLSVTAYSYFFGTM-FMVTSAF 245

Query: 254 FERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIM 313
           F  N          E F+++YAGV+AS + + +  W     GP  VA+Y P+Q    A +
Sbjct: 246 FMTNESTNWSLTRSEFFAVVYAGVIASALNYGLLTWSNKILGPSLVALYNPLQPAASAFL 305

Query: 314 ASFALGEEFYLG 325
           +   LG   YLG
Sbjct: 306 SRIFLGSPIYLG 317

Arabidopsis thaliana (taxid: 3702)

>sp|Q8GXB4|WTR2_ARATH WAT1-related protein At1g09380 OS=Arabidopsis thaliana GN=At1g09380 PE=2 SV=1

 Score =  211 bits (538), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 116/306 (37%), Positives = 175/306 (57%), Gaps = 6/306 (1%)

Query: 24  LAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLN 83
           LAMV +Q GYAG ++ S+ A+  G+  L+   YR I A +   P A+FLE+K RP +TL 
Sbjct: 10  LAMVLVQIGYAGMNITSKMAMEAGMKPLILVAYRQIFATIATFPVAFFLERKTRPKITLR 69

Query: 84  FALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRK 143
             +Q    ++ G T NQ  Y +GL+N+SPT A A+ N +PA+TFL+AAIFR E V + + 
Sbjct: 70  ILVQVFFCSITGATGNQVLYFVGLQNSSPTIACALTNLLPAVTFLLAAIFRQETVGIKKA 129

Query: 144 DGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGK-NWT 202
            G AKV+GTL CV GA V++ Y G TI      ++    +++T       G + G  N+ 
Sbjct: 130 SGQAKVIGTLVCVIGAMVLSFYHGHTIGIGESKIHWAYAENITKH-----GSSSGHSNFF 184

Query: 203 LGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWI 262
           LG   ++   +SW+ W ++Q  + + + A  + T   C  G IQ   IA I +  +  W 
Sbjct: 185 LGPFLIMAAAVSWAAWFIIQTKMSETFAAPYTSTLLMCLMGSIQCGAIALISDHTISDWS 244

Query: 263 FHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEF 322
             +     S LYAGVVAS +AF +  W + R GP++V+V+ P+  +VVAI +   L E+ 
Sbjct: 245 LSSPLRFISALYAGVVASALAFCLMSWAMQRKGPLYVSVFSPLLLVVVAIFSWALLEEKL 304

Query: 323 YLGGYV 328
           Y G ++
Sbjct: 305 YTGTFM 310

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	376
255538804	384	Auxin-induced protein 5NG4, putative [Ri	0.861	0.843	0.848	1e-163
317106672	384	JHL18I08.9 [Jatropha curcas]	0.861	0.843	0.845	1e-161
224085766	384	mtn21-like protein [Populus trichocarpa]	0.861	0.843	0.827	1e-156
118482147	384	unknown [Populus trichocarpa]	0.861	0.843	0.824	1e-155
225458125	383	PREDICTED: auxin-induced protein 5NG4-li	0.859	0.843	0.827	1e-155
224062061	384	predicted protein [Populus trichocarpa]	0.843	0.825	0.836	1e-155
356553415	389	PREDICTED: auxin-induced protein 5NG4-li	0.872	0.843	0.814	1e-154
356564327	394	PREDICTED: auxin-induced protein 5NG4-li	0.877	0.837	0.796	1e-154
449469925	396	PREDICTED: auxin-induced protein 5NG4-li	0.875	0.830	0.790	1e-152
356509972	388	PREDICTED: auxin-induced protein 5NG4-li	0.877	0.850	0.830	1e-152

>gi|255538804|ref|XP_002510467.1| Auxin-induced protein 5NG4, putative [Ricinus communis] gi|223551168|gb|EEF52654.1| Auxin-induced protein 5NG4, putative [Ricinus communis]

 Score =  581 bits (1498), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 281/331 (84%), Positives = 308/331 (93%), Gaps = 7/331 (2%)

Query: 1   MADTAGSVSTRRM-CSVPEKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNI 59
           MADT GSVS+RRM CSVPE+LQLH+AM+ LQFGYAGFHVVSRAALNMGISKLVFPVYRNI
Sbjct: 1   MADTGGSVSSRRMWCSVPERLQLHMAMLTLQFGYAGFHVVSRAALNMGISKLVFPVYRNI 60

Query: 60  IAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQ 119
           IA LLLLPFAYFLEKKERPA+TLNF +QF LLAL+GITANQGFYLLGL+NTSPTFASAIQ
Sbjct: 61  IALLLLLPFAYFLEKKERPAITLNFIIQFFLLALIGITANQGFYLLGLDNTSPTFASAIQ 120

Query: 120 NSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQ 179
           NSVPAITFLMAA+ RIEKVRLDRKDGIAKV+GT+ CVAGA+VITLYKGP +YSP PPLN+
Sbjct: 121 NSVPAITFLMAALLRIEKVRLDRKDGIAKVIGTICCVAGASVITLYKGPVVYSPVPPLNK 180

Query: 180 IQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYT 239
             P      +F+SLGDA+GKNWTLGC+YLIGHCLSWSGWLV+QAPVLKKYPARLSVT+YT
Sbjct: 181 PTP------MFVSLGDARGKNWTLGCIYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYT 234

Query: 240 CFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFV 299
           CFFGLIQF+IIAAIFER+  AW+FH+GGE+F+ILYAGVVASGIAFAVQIWCIDRGGPVFV
Sbjct: 235 CFFGLIQFLIIAAIFERDTQAWMFHSGGELFTILYAGVVASGIAFAVQIWCIDRGGPVFV 294

Query: 300 AVYQPVQTLVVAIMASFALGEEFYLGGYVPA 330
           AVYQPVQTLVVAIMAS ALGEEFYLGG + A
Sbjct: 295 AVYQPVQTLVVAIMASIALGEEFYLGGMIGA 325

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|317106672|dbj|BAJ53175.1| JHL18I08.9 [Jatropha curcas]

 Score =  572 bits (1475), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 280/331 (84%), Positives = 306/331 (92%), Gaps = 7/331 (2%)

Query: 1   MADTAGSVSTRRM-CSVPEKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNI 59
           MADT GSVS+RRM CSVPE+ QLHLAM+ALQFGYAGFHVVSRAALNMG+SKLVFPVYRNI
Sbjct: 1   MADTGGSVSSRRMWCSVPERFQLHLAMLALQFGYAGFHVVSRAALNMGVSKLVFPVYRNI 60

Query: 60  IAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQ 119
           IAFLLL+PFAYFLEKKERPA+TLNF +QF LLALVGITANQGFYLLGL+NTSPTFASAIQ
Sbjct: 61  IAFLLLVPFAYFLEKKERPAITLNFLIQFFLLALVGITANQGFYLLGLDNTSPTFASAIQ 120

Query: 120 NSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQ 179
           NSVPAITFLMAA+ RIEKVRL+RKDGIAKV+GT+FCVAGA+VITLYKGP IY PAP L++
Sbjct: 121 NSVPAITFLMAALLRIEKVRLNRKDGIAKVLGTIFCVAGASVITLYKGPVIYDPAPSLHR 180

Query: 180 IQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYT 239
             P      +F+SLGDAKGKNWTLGC+YLIGHCLSWSGWLV+QAPVLKKYPARLSVT+YT
Sbjct: 181 PTP------MFVSLGDAKGKNWTLGCIYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYT 234

Query: 240 CFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFV 299
           CFFGLIQF+IIAA  ER+  AWIFH+GGE+F+ILYAGVVASGIAFAVQIWCIDRGGPVFV
Sbjct: 235 CFFGLIQFLIIAAFMERDPQAWIFHSGGELFTILYAGVVASGIAFAVQIWCIDRGGPVFV 294

Query: 300 AVYQPVQTLVVAIMASFALGEEFYLGGYVPA 330
           AVYQPVQTLVVAIMAS AL EEFYLGG + A
Sbjct: 295 AVYQPVQTLVVAIMASIALAEEFYLGGIIGA 325

Source: Jatropha curcas

Species: Jatropha curcas

Genus: Jatropha

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224085766|ref|XP_002307691.1| mtn21-like protein [Populus trichocarpa] gi|118482873|gb|ABK93351.1| unknown [Populus trichocarpa] gi|222857140|gb|EEE94687.1| mtn21-like protein [Populus trichocarpa]

 Score =  558 bits (1438), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 274/331 (82%), Positives = 299/331 (90%), Gaps = 7/331 (2%)

Query: 1   MADTAGSVSTRRM-CSVPEKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNI 59
           M D  GS S+RRM CSVPE+ QLHLAM+ALQFGYAGFHVVSRAALNMG+SKLVFPVYRNI
Sbjct: 1   MPDVGGSASSRRMWCSVPERFQLHLAMLALQFGYAGFHVVSRAALNMGVSKLVFPVYRNI 60

Query: 60  IAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQ 119
           IA LLLLPFAYFLEKKERPA+TLNF LQF  LALVGITANQGFYLLGLENTSPTFASAIQ
Sbjct: 61  IALLLLLPFAYFLEKKERPALTLNFVLQFFFLALVGITANQGFYLLGLENTSPTFASAIQ 120

Query: 120 NSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQ 179
           NSVPAITFLMAA+ RIEKVR++RKDGIAKV+GT+ CVAGA+VITLY GP +YSPA  LN+
Sbjct: 121 NSVPAITFLMAALLRIEKVRINRKDGIAKVLGTICCVAGASVITLYTGPVVYSPAKHLNR 180

Query: 180 IQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYT 239
             P      +F+SLGDA+ KNWTLGC+YLIGHCLSWSGWLV+QAPVLKKYPARLSVT+YT
Sbjct: 181 PTP------MFVSLGDAEAKNWTLGCLYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYT 234

Query: 240 CFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFV 299
           CFFGLIQF+IIAA  ER+  AWIFH+GGE+F+ILYAGVVASGIAFAVQIWCIDRGGPVFV
Sbjct: 235 CFFGLIQFIIIAAFMERDPQAWIFHSGGELFTILYAGVVASGIAFAVQIWCIDRGGPVFV 294

Query: 300 AVYQPVQTLVVAIMASFALGEEFYLGGYVPA 330
           AVYQPVQTLVVAIMAS ALGEEFYLGG + A
Sbjct: 295 AVYQPVQTLVVAIMASIALGEEFYLGGIIGA 325

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118482147|gb|ABK93004.1| unknown [Populus trichocarpa]

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 273/331 (82%), Positives = 298/331 (90%), Gaps = 7/331 (2%)

Query: 1   MADTAGSVSTRRM-CSVPEKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNI 59
           M D  GS S+RRM CSVPE+ QLHLAM+ALQFGYAGFHVVSRAALNMG+SKLVFPVYRNI
Sbjct: 1   MPDVGGSASSRRMWCSVPERFQLHLAMLALQFGYAGFHVVSRAALNMGVSKLVFPVYRNI 60

Query: 60  IAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQ 119
           IA LLLLPFAYFLEKKERPA+TLNF LQF  LALVGITANQGFYLLGLENTSPTFASAIQ
Sbjct: 61  IALLLLLPFAYFLEKKERPALTLNFVLQFFFLALVGITANQGFYLLGLENTSPTFASAIQ 120

Query: 120 NSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQ 179
           NSVPAITFLMAA+ RIEKVR++RKDGIAKV+GT+ CVAGA+VITLY GP +YSPA  LN+
Sbjct: 121 NSVPAITFLMAALLRIEKVRINRKDGIAKVLGTICCVAGASVITLYTGPVVYSPAKHLNR 180

Query: 180 IQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYT 239
             P      +F+SLGDA+ KNWTLGC+YLIGHCLSWSGWLV+QAPVLKKYPARLSVT+YT
Sbjct: 181 PTP------MFVSLGDAEAKNWTLGCLYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYT 234

Query: 240 CFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFV 299
           CFFGLIQF+IIAA  ER+  AWIFH+GGE+F+ILYAGVVASGIAFAVQIWCI RGGPVFV
Sbjct: 235 CFFGLIQFIIIAAFMERDPQAWIFHSGGELFTILYAGVVASGIAFAVQIWCIGRGGPVFV 294

Query: 300 AVYQPVQTLVVAIMASFALGEEFYLGGYVPA 330
           AVYQPVQTLVVAIMAS ALGEEFYLGG + A
Sbjct: 295 AVYQPVQTLVVAIMASIALGEEFYLGGIIGA 325

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225458125|ref|XP_002280062.1| PREDICTED: auxin-induced protein 5NG4-like [Vitis vinifera]

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 274/331 (82%), Positives = 302/331 (91%), Gaps = 8/331 (2%)

Query: 1   MADTAGSVSTRRM-CSVPEKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNI 59
           MADT GS S+RRM CSVPE++QLHLAM+ALQFGYAGFHVVSRAALNMGISKLVFPVYRNI
Sbjct: 1   MADT-GSTSSRRMWCSVPERVQLHLAMLALQFGYAGFHVVSRAALNMGISKLVFPVYRNI 59

Query: 60  IAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQ 119
           IA LLL PFAYFLEKKERPA+TL+F +QF LLALVGITANQGFYLLGL+NTSPTFASAIQ
Sbjct: 60  IALLLLAPFAYFLEKKERPALTLSFVVQFFLLALVGITANQGFYLLGLDNTSPTFASAIQ 119

Query: 120 NSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQ 179
           NSVPAITFLMAA+ RIE+VRL+RKDG+AKV+GT+ CVAGA+VITLYKGPTIYSP+     
Sbjct: 120 NSVPAITFLMAAVLRIEQVRLNRKDGLAKVLGTILCVAGASVITLYKGPTIYSPS----- 174

Query: 180 IQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYT 239
            +PD+ T  +FLSLGDAKGKNWTLGCVYLIGHCLSWS WLV+QAPVLKKYPARLSVT+YT
Sbjct: 175 TRPDN-TPPLFLSLGDAKGKNWTLGCVYLIGHCLSWSAWLVLQAPVLKKYPARLSVTSYT 233

Query: 240 CFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFV 299
           CFFGLIQF+IIA + ERN  AW+ H+G E+FS+ YAGVVASGIAFAVQIWCIDRGGPVFV
Sbjct: 234 CFFGLIQFLIIALVIERNSQAWLIHSGAELFSVFYAGVVASGIAFAVQIWCIDRGGPVFV 293

Query: 300 AVYQPVQTLVVAIMASFALGEEFYLGGYVPA 330
           AVYQPVQTLVVAIMAS ALGEEFYLGG + A
Sbjct: 294 AVYQPVQTLVVAIMASVALGEEFYLGGIIGA 324

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224062061|ref|XP_002300735.1| predicted protein [Populus trichocarpa] gi|118484816|gb|ABK94275.1| unknown [Populus trichocarpa] gi|222842461|gb|EEE80008.1| predicted protein [Populus trichocarpa]

 Score =  552 bits (1423), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 271/324 (83%), Positives = 295/324 (91%), Gaps = 7/324 (2%)

Query: 1   MADTAGSVSTRRM-CSVPEKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNI 59
           MAD  GS S+ RM CSVPE+ QLHLAM+ALQFGYAGFHVVSRAALNMG+SKLVFPVYRN 
Sbjct: 1   MADVGGSASSGRMWCSVPERFQLHLAMLALQFGYAGFHVVSRAALNMGVSKLVFPVYRNT 60

Query: 60  IAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQ 119
           IA LLLLPFAYFLEKKERPA+TLNF +QF LLALVGITANQGFYLLGLENTSPTFASAIQ
Sbjct: 61  IALLLLLPFAYFLEKKERPALTLNFVVQFFLLALVGITANQGFYLLGLENTSPTFASAIQ 120

Query: 120 NSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQ 179
           NSVPAITFLMAA+ RIEKVR++R DGIAKV+GT+ CVAGA+VITLY GP IYSPAP LN+
Sbjct: 121 NSVPAITFLMAALLRIEKVRINRIDGIAKVLGTICCVAGASVITLYNGPVIYSPAPHLNR 180

Query: 180 IQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYT 239
             P      +F+SLGDA+GKNWTLGC+YLIGHCLSWSGWLV+QAPVLKKYPARLSVT+YT
Sbjct: 181 PAP------MFVSLGDARGKNWTLGCIYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYT 234

Query: 240 CFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFV 299
           CFFGLIQF+IIAA  ER+  AWIFH+GGE+F+ILYAGVVASGIAFAVQIWCIDRGGPVFV
Sbjct: 235 CFFGLIQFLIIAAFMERDPQAWIFHSGGELFTILYAGVVASGIAFAVQIWCIDRGGPVFV 294

Query: 300 AVYQPVQTLVVAIMASFALGEEFY 323
           AVYQPVQTLVVAIMAS ALGEEFY
Sbjct: 295 AVYQPVQTLVVAIMASIALGEEFY 318

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356553415|ref|XP_003545052.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]

 Score =  551 bits (1420), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 272/334 (81%), Positives = 297/334 (88%), Gaps = 6/334 (1%)

Query: 1   MADTAGSVSTRRM-CSVPEKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNI 59
           MAD  GS S++RM CSVPE++QLHLAM+ALQFGYAGFHVVSRAALNMG+SKLVFPVYRNI
Sbjct: 1   MADL-GSASSKRMWCSVPERMQLHLAMLALQFGYAGFHVVSRAALNMGVSKLVFPVYRNI 59

Query: 60  IAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQ 119
           IA LLLLPFAYFLEKK+RPAMTLNF  QF LLALVGITANQGFYLLGLENTSPTFASAIQ
Sbjct: 60  IALLLLLPFAYFLEKKDRPAMTLNFVCQFFLLALVGITANQGFYLLGLENTSPTFASAIQ 119

Query: 120 NSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQ 179
           NSVPAITFLMAAI RIE+VRL+RKDG+ KV GT+ CV GATVITLYKGPTIYSP   +N 
Sbjct: 120 NSVPAITFLMAAILRIEQVRLNRKDGLGKVAGTVLCVVGATVITLYKGPTIYSPTTGVN- 178

Query: 180 IQPDSLTSTIFL---SLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVT 236
           I    +T    L   SLGDAKGKNWTLGC+YLIGHCLSWSGWLV+QAPVLKKYPARLSVT
Sbjct: 179 INNTRVTQVFELGSVSLGDAKGKNWTLGCLYLIGHCLSWSGWLVLQAPVLKKYPARLSVT 238

Query: 237 AYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGP 296
           +YTCFFGL+QF++IA + ER+  AW+FH+GGE F+ILYAGVVASGIAFAVQIWCIDRGGP
Sbjct: 239 SYTCFFGLLQFLVIALLLERDAQAWLFHSGGEAFTILYAGVVASGIAFAVQIWCIDRGGP 298

Query: 297 VFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPA 330
           VFVAVYQPVQT VVAIMAS ALGEEFYLGG + A
Sbjct: 299 VFVAVYQPVQTFVVAIMASIALGEEFYLGGIIGA 332

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356564327|ref|XP_003550406.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]

 Score =  550 bits (1416), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 270/339 (79%), Positives = 296/339 (87%), Gaps = 9/339 (2%)

Query: 1   MADTAGSVSTRRMCSVPEKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNII 60
           MAD   + S R  CSVPE++QLHLAM+ALQFGYAGFHV+SRAALNMG+SKLVFPVYRNII
Sbjct: 1   MADLGSAPSKRMWCSVPERMQLHLAMLALQFGYAGFHVISRAALNMGVSKLVFPVYRNII 60

Query: 61  AFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQN 120
           A LLLLPFAYFLEKKERPAMTLNF  QF LLALVGITANQGFYLLGL+NTSPTFASAIQN
Sbjct: 61  ALLLLLPFAYFLEKKERPAMTLNFVGQFFLLALVGITANQGFYLLGLDNTSPTFASAIQN 120

Query: 121 SVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQ- 179
           SVPAITFLMA I RIE+VRL+RKDG+AKV GT+ CVAGATVITLYKGPTIYSP   +N  
Sbjct: 121 SVPAITFLMAVILRIEQVRLNRKDGLAKVAGTVLCVAGATVITLYKGPTIYSPTTRVNNS 180

Query: 180 -IQPDSLTSTIF-------LSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPA 231
            I   S T+ I        LSLGDAKGKNWTLGC+YLIGHCLSWSGWLV+QAPVLKKYPA
Sbjct: 181 MIMNRSNTTVITPMFDFGSLSLGDAKGKNWTLGCLYLIGHCLSWSGWLVLQAPVLKKYPA 240

Query: 232 RLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCI 291
           RLSVT+YTCFFG++QF++IA + ER+  AW+FH+ GEVF+ILYAGVVASGIAFAVQIWCI
Sbjct: 241 RLSVTSYTCFFGILQFLVIALLLERDAQAWLFHSAGEVFTILYAGVVASGIAFAVQIWCI 300

Query: 292 DRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPA 330
           DRGGPVFVAVYQPVQT VVAIMAS ALGEEFYLGG + A
Sbjct: 301 DRGGPVFVAVYQPVQTFVVAIMASIALGEEFYLGGIIGA 339

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449469925|ref|XP_004152669.1| PREDICTED: auxin-induced protein 5NG4-like [Cucumis sativus] gi|449532196|ref|XP_004173068.1| PREDICTED: auxin-induced protein 5NG4-like [Cucumis sativus]

 Score =  543 bits (1398), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 268/339 (79%), Positives = 299/339 (88%), Gaps = 10/339 (2%)

Query: 1   MADTAGSVSTRRM-CSVPEKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNI 59
           MAD+ GS S +RM CS+PE+ QLH AM+ALQFGYAGFHVVSRAALNMGISKLVFPVYRN+
Sbjct: 1   MADS-GSASDKRMSCSIPERFQLHAAMLALQFGYAGFHVVSRAALNMGISKLVFPVYRNV 59

Query: 60  IAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQ 119
           IA LLLLPFAYF+EKK+RPA+TLNF LQF LLALVGITANQGFYLLGL+NTSPTFAS IQ
Sbjct: 60  IALLLLLPFAYFIEKKDRPALTLNFVLQFFLLALVGITANQGFYLLGLDNTSPTFASCIQ 119

Query: 120 NSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQ 179
           NSVPAITFLMAA+ RIE+VRL+RKDGIAKV+GT+ CVAGATVITLYKGPTIYSP+     
Sbjct: 120 NSVPAITFLMAALLRIEQVRLNRKDGIAKVMGTICCVAGATVITLYKGPTIYSPSTTTVT 179

Query: 180 IQPDSLTST--------IFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPA 231
           +Q  + T+         +F SLGDAKGK+WTLGCVYLIGHCLSWS WLV+QAPVLKKYPA
Sbjct: 180 LQGMAETTAAMTLQGPGMFPSLGDAKGKSWTLGCVYLIGHCLSWSAWLVLQAPVLKKYPA 239

Query: 232 RLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCI 291
           RLSVT++TCFFGLIQF+IIA  FER+  AW+FH+G E FSI+YAGVVASGIAFAVQIWCI
Sbjct: 240 RLSVTSFTCFFGLIQFLIIAVAFERDAQAWLFHSGAEAFSIVYAGVVASGIAFAVQIWCI 299

Query: 292 DRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPA 330
           DRGGPVFVAVYQPVQT VVA+MASFALGEEFYLGG + A
Sbjct: 300 DRGGPVFVAVYQPVQTFVVALMASFALGEEFYLGGIIGA 338

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356509972|ref|XP_003523716.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]

 Score =  542 bits (1397), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 274/330 (83%), Positives = 297/330 (90%)

Query: 1   MADTAGSVSTRRMCSVPEKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNII 60
           MAD+  + S+R  CS+PE++QLH AM+ALQFGYAGFHVVSRAALNMGISKLVFPVYRNII
Sbjct: 1   MADSGSASSSRMWCSIPERVQLHAAMLALQFGYAGFHVVSRAALNMGISKLVFPVYRNII 60

Query: 61  AFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQN 120
           AFLLLLPFAYFLEKKERPA+TLNF LQF LLALVGITANQGFYLLGL+NTSPTFASAIQN
Sbjct: 61  AFLLLLPFAYFLEKKERPAITLNFLLQFFLLALVGITANQGFYLLGLDNTSPTFASAIQN 120

Query: 121 SVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQI 180
           SVPAITFLMA I RIE+VRL+RKDGIAKV GT+FCVAGATVITLYKGPTIYSP+PPL   
Sbjct: 121 SVPAITFLMAVILRIEQVRLNRKDGIAKVAGTIFCVAGATVITLYKGPTIYSPSPPLQSE 180

Query: 181 QPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTC 240
               +      SLGDAKGKNWTLGC+YLIGHCLSWS WLV+QAPVLKKYPARLSVT+YTC
Sbjct: 181 SSVVVEFGTLSSLGDAKGKNWTLGCLYLIGHCLSWSAWLVLQAPVLKKYPARLSVTSYTC 240

Query: 241 FFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVA 300
           FFGLIQF++IA I ER+  AWIF +GGEVF+ILYAGVVASGIAFAVQIWCIDRGGPVFVA
Sbjct: 241 FFGLIQFLVIALIVERDAQAWIFQSGGEVFTILYAGVVASGIAFAVQIWCIDRGGPVFVA 300

Query: 301 VYQPVQTLVVAIMASFALGEEFYLGGYVPA 330
           VYQPVQTLVVAIMAS ALGEEFYLGG + A
Sbjct: 301 VYQPVQTLVVAIMASLALGEEFYLGGIIGA 330

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	376
TAIR|locus:2005689	389	WAT1 "Walls Are Thin 1" [Arabi	0.869	0.840	0.736	2.8e-128
UNIPROTKB|Q6J163	410	Q6J163 "Auxin-induced protein	0.837	0.768	0.625	1.2e-106
TAIR|locus:2102028	369	UMAMIT6 "Usually multiple acid	0.827	0.842	0.569	2.5e-97
TAIR|locus:2092702	383	UMAMIT4 "AT3G18200" [Arabidops	0.811	0.796	0.546	9.6e-89
TAIR|locus:2077162	385	UMAMIT3 "Usually multiple acid	0.811	0.792	0.399	2.9e-55
TAIR|locus:2169414	402	UMAMIT9 "Usually multiple acid	0.816	0.763	0.362	2.7e-52
TAIR|locus:2118686	373	UMAMIT34 "AT4G30420" [Arabidop	0.784	0.790	0.380	5.6e-52
TAIR|locus:2039792	374	UMAMIT14 "AT2G39510" [Arabidop	0.781	0.786	0.382	2.4e-51
TAIR|locus:2132447	384	UMAMIT20 "Usually multiple aci	0.800	0.783	0.374	2.4e-51
TAIR|locus:2012255	374	UMAMIT25 "Usually multiple aci	0.797	0.802	0.362	1.7e-50

TAIR|locus:2005689 WAT1 "Walls Are Thin 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1259 (448.2 bits), Expect = 2.8e-128, P = 2.8e-128
 Identities = 243/330 (73%), Positives = 277/330 (83%)

Query:     1 MADTAGSVSTRRMCSVPEKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNII 60
             MAD   +   R +  VPEKLQLH+AM+ LQFGYAGFHVVSRAALNMGISKLVFPVYRNII
Sbjct:     1 MADNTDN--RRSLWGVPEKLQLHIAMLTLQFGYAGFHVVSRAALNMGISKLVFPVYRNII 58

Query:    61 XXXXXXXXXXXXEKKERPAMTLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQN 120
                         EKKERPA+TLNF +QF  LAL+GITANQGFYLLGL+NTSPTFAS++QN
Sbjct:    59 ALLLLLPFAYFLEKKERPAITLNFLIQFFFLALIGITANQGFYLLGLDNTSPTFASSMQN 118

Query:   121 SVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQI 180
             SVPAITFLMAA+ RIEKVR++R+DGI+K++GT  CVAGA+VITLYKGPTIY+PA  L+  
Sbjct:   119 SVPAITFLMAALLRIEKVRINRRDGISKILGTALCVAGASVITLYKGPTIYTPASHLHA- 177

Query:   181 QPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTC 240
                +  S +   LG+A  KNWTLGC+YLIGHCLSWSGWLV QAPVLK YPARLSVT+YTC
Sbjct:   178 HLLTTNSAVLAPLGNAAPKNWTLGCIYLIGHCLSWSGWLVFQAPVLKSYPARLSVTSYTC 237

Query:   241 FFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVA 300
             FFG+IQF+IIAA  ER+  AW+FH+G E+F+ILYAG+VASGIAFAVQIWCIDRGGPVFVA
Sbjct:   238 FFGIIQFLIIAAFCERDSQAWVFHSGWELFTILYAGIVASGIAFAVQIWCIDRGGPVFVA 297

Query:   301 VYQPVQTLVVAIMASFALGEEFYLGGYVPA 330
             VYQPVQTLVVAIMAS ALGEEFYLGG + A
Sbjct:   298 VYQPVQTLVVAIMASIALGEEFYLGGIIGA 327

GO:0016020 "membrane" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009705 "plant-type vacuole membrane" evidence=IDA

GO:0009826 "unidimensional cell growth" evidence=IMP

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

GO:0090355 "positive regulation of auxin metabolic process" evidence=IMP

GO:0090358 "positive regulation of tryptophan metabolic process" evidence=IMP

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0006833 "water transport" evidence=RCA

GO:0007389 "pattern specification process" evidence=RCA

GO:0008361 "regulation of cell size" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=RCA

GO:0009926 "auxin polar transport" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010015 "root morphogenesis" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0040007 "growth" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

UNIPROTKB|Q6J163 Q6J163 "Auxin-induced protein 5NG4" [Pinus taeda (taxid:3352)]

 Score = 1055 (376.4 bits), Expect = 1.2e-106, P = 1.2e-106
 Identities = 205/328 (62%), Positives = 258/328 (78%)

Query:     5 AGSVSTRRMCSVPEKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIXXXX 64
             A ++  R    + E+++LH AM+ALQFGYAGFH+VSRAALNMG+SK+VFPVYRNI+    
Sbjct:     2 ASNIMQRCNVFMSERVKLHAAMLALQFGYAGFHIVSRAALNMGVSKVVFPVYRNILALML 61

Query:    65 XXXXXXXXEKKERPAMTLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPA 124
                     EKKERPA+TL+F +QF LLAL GIT       L +    PTFASAIQNSVPA
Sbjct:    62 IGPCAYFLEKKERPALTLSFLIQFFLLALCGITGQSRILSLRIVLHIPTFASAIQNSVPA 121

Query:   125 ITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQI-QPD 183
             ITF+MAA  R+EKV + R+DG+AK++GT+ CV+GAT+ITLYKGP       P+  I +P+
Sbjct:   122 ITFIMAAALRLEKVHISRRDGLAKIIGTVACVSGATIITLYKGP-------PITHIWRPN 174

Query:   184 -SLTSTIFLSL-GD---AKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAY 238
               +T++ F +  G+   AK +NWTLGC+YL+G+CL+WSGW+V+QAPVLK+YPARLSVT++
Sbjct:   175 LEVTASYFKAFQGNDLSAKSENWTLGCIYLLGNCLAWSGWIVLQAPVLKRYPARLSVTSF 234

Query:   239 TCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVF 298
             TCFFG+IQF+IIAA FE +L+ W  H+GGE+F+ILYAG VASGIAF+VQIWCIDRGGPVF
Sbjct:   235 TCFFGVIQFLIIAAFFETDLEHWKIHSGGELFTILYAGFVASGIAFSVQIWCIDRGGPVF 294

Query:   299 VAVYQPVQTLVVAIMASFALGEEFYLGG 326
             VAVYQPVQT+ VAIMAS  LGE+FYLGG
Sbjct:   295 VAVYQPVQTIAVAIMASIILGEQFYLGG 322

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=IDA

GO:0005887 "integral to plasma membrane" evidence=NAS

GO:0005938 "cell cortex" evidence=IDA

GO:0006810 "transport" evidence=NAS

GO:0009734 "auxin mediated signaling pathway" evidence=IDA

TAIR|locus:2102028 UMAMIT6 "Usually multiple acids move in and out Transporters 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 967 (345.5 bits), Expect = 2.5e-97, P = 2.5e-97
 Identities = 181/318 (56%), Positives = 236/318 (74%)

Query:    13 MCSVPEKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIXXXXXXXXXXXX 72
             M  +PE+ +LH+AMV  Q GYAG HV+ R ALN+G+SKLVFP+YR I+            
Sbjct:     1 MSPIPERAKLHIAMVVFQTGYAGNHVIMRYALNLGVSKLVFPLYRTIVAFSVLAPSAYFL 60

Query:    73 EKKERPAMTLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAI 132
             EKKERPAM ++F +QF LL LVGIT NQGFY+ GL+NTSPTFASA +N VPA++FLMAA+
Sbjct:    61 EKKERPAMKISFLIQFFLLGLVGITLNQGFYIFGLDNTSPTFASATENVVPAVSFLMAAL 120

Query:   133 FRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLS 192
               IEKV   RKDGIAKVVGT+  VAG+ VITLYKGPTIY P+  LN +       TI   
Sbjct:   121 LGIEKVEWKRKDGIAKVVGTIVSVAGSLVITLYKGPTIYQPS--LNIVN-----QTIKPE 173

Query:   193 LGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAA 252
               + + KNWTLGC+ L+GHCL WS W+V+Q+P+LKKYPAR S  +Y+CFF +IQF  I+A
Sbjct:   174 EAEEENKNWTLGCLCLMGHCLCWSSWIVLQSPLLKKYPARFSFVSYSCFFAVIQFFGISA 233

Query:   253 IFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAI 312
              FER+L+ W   +GGE++++LY G+V S + FA+QI+ ++RGGP+FV+ Y P+QTL+ A+
Sbjct:   234 YFERDLERWKIISGGELYALLYTGLVGSAMVFAIQIYVVERGGPLFVSAYLPLQTLIAAV 293

Query:   313 MASFALGEEFYLGGYVPA 330
             +A+ ALGE FYLGG + A
Sbjct:   294 LATLALGEHFYLGGLIGA 311

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

GO:0009062 "fatty acid catabolic process" evidence=RCA

TAIR|locus:2092702 UMAMIT4 "AT3G18200" [Arabidopsis thaliana (taxid:3702)]

 Score = 886 (316.9 bits), Expect = 9.6e-89, P = 9.6e-89
 Identities = 172/315 (54%), Positives = 232/315 (73%)

Query:    16 VPEKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIXXXXXXXXXXXXEKK 75
             V EK++L +A++ LQF +AGFH+VSR ALN+G+SK+V+PVYRN++            EKK
Sbjct:    29 VSEKVKLVVALITLQFCFAGFHIVSRVALNIGVSKVVYPVYRNLLALLLIGPFAYFFEKK 88

Query:    76 ERPAMTLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRI 135
             ERP +T++   QF  LAL+GITANQGFYLLGL   +PTFASA+QNSVPAITF+MA   R+
Sbjct:    89 ERPPLTISLLAQFFFLALIGITANQGFYLLGLYYATPTFASAMQNSVPAITFIMACALRL 148

Query:   136 EKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLGD 195
             E + L RK G+AKV+GTL  + GATVITLY+G  I+     LN +Q + +       +G 
Sbjct:   149 EHIDLVRKHGVAKVLGTLVSIGGATVITLYRGFPIFDQG--LN-MQKEEV-------VGS 198

Query:   196 AKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFE 255
                 + TLG +YL+GHCLSW+GW+V+QAPVLK+YPA+L++T++TCFFGLIQF++IA   E
Sbjct:   199 DNSHSLTLGWLYLMGHCLSWAGWMVLQAPVLKQYPAKLTLTSFTCFFGLIQFLVIALFVE 258

Query:   256 RNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMAS 315
              +L+ WI  +  E+F+ILYAG++ASG+   +Q WCI + GPVFVAV+QP+QTL+VA MA 
Sbjct:   259 TDLNNWIIVSWEELFTILYAGIIASGLVVYLQTWCIYKSGPVFVAVFQPLQTLLVAAMAF 318

Query:   316 FALGEEFYLGGYVPA 330
               LG++ Y GG V A
Sbjct:   319 LILGDQLYSGGIVGA 333

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2077162 UMAMIT3 "Usually multiple acids move in and out Transporters 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
 Identities = 125/313 (39%), Positives = 185/313 (59%)

Query:    18 EKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIXXXXXXXXXXXXEKKER 77
             E  + H+AM+ +Q    G+HV+++ ALN+G+++LVF V+R++I            +K+ R
Sbjct:     8 EAWKAHVAMIGVQLFNGGYHVITKVALNVGVNQLVFCVFRDLIALSILAPLAYIRDKRTR 67

Query:    78 PAMTLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEK 137
             P +   F L F  L L GI  NQ  +L+GL  T+PT+A+AIQ S+P  TF++A I   E+
Sbjct:    68 PPLNRQFLLAFFFLGLTGIFGNQLLFLIGLNYTNPTYAAAIQPSIPVFTFILALIMGTER 127

Query:   138 VRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIY--SPAPPLNQIQP-DSLTSTIFLSLG 194
             + L + +G AKV GTL CVAGA ++ L++G  ++  + A  L   +   + TS  F+S G
Sbjct:   128 LNLFKLEGQAKVGGTLICVAGAVLMVLFRGLALFGETEAESLGHGESRHTETSGHFMS-G 186

Query:   195 DAKGKN-WTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAI 253
                G   W LG + LIG+C   + +L +QAPVLKKYPA LSVTAY+ FFG + FM+ +A 
Sbjct:   187 FFNGLGRWNLGVLCLIGNCTCMAAFLAIQAPVLKKYPANLSVTAYSYFFGTM-FMVTSAF 245

Query:   254 FERNLDA-WIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAI 312
             F  N    W      E F+++YAGV+AS + + +  W     GP  VA+Y P+Q    A 
Sbjct:   246 FMTNESTNWSLTRS-EFFAVVYAGVIASALNYGLLTWSNKILGPSLVALYNPLQPAASAF 304

Query:   313 MASFALGEEFYLG 325
             ++   LG   YLG
Sbjct:   305 LSRIFLGSPIYLG 317

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2169414 UMAMIT9 "Usually multiple acids move in and out Transporters 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
 Identities = 112/309 (36%), Positives = 179/309 (57%)

Query:    23 HLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIXXXXXXXXXXXXEKKERPAMTL 82
             + AM++LQFGYAG +++++ +LN G+S  V  VYR+ I            E+K +P +T 
Sbjct:    19 YFAMISLQFGYAGMNIITKISLNTGMSHYVLVVYRHAIATAVIAPFAFFFERKAQPKITF 78

Query:    83 NFALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDR 142
             +  +Q  +L L+G   +Q FY +GL+ TSPTF+ A+ N +PA+TF++A +FR+E + L +
Sbjct:    79 SIFMQLFILGLLGPVIDQNFYYMGLKYTSPTFSCAMSNMLPAMTFILAVLFRMEMLDLKK 138

Query:   143 KDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWT 202
                 AK+ GT+  VAGA ++T+YKGP +         IQ  S  +T   S   +  K + 
Sbjct:   139 LWCQAKIAGTVVTVAGAMLMTIYKGPIVELFWTKYMHIQDSSHANTTS-SKNSSSDKEFL 197

Query:   203 LGCVYLIGHCLSWSGWLVMQAPVLKKYPA-RLSVTAYTCFFGLIQFMIIAAIFERNLDAW 261
              G + LI   L+W+   V+QA +LK Y   +LS+T   CF G +Q + +  + E N  AW
Sbjct:   198 KGSILLIFATLAWASLFVLQAKILKTYAKHQLSLTTLICFIGTLQAVAVTFVMEHNPSAW 257

Query:   262 IFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEE 321
                    + +  Y+G+VAS I++ VQ   + + GPVF   + P+  ++VA+M SF L E+
Sbjct:   258 RIGWDMNLLAAAYSGIVASSISYYVQGIVMKKRGPVFATAFSPLMMVIVAVMGSFVLAEK 317

Query:   322 FYLGGYVPA 330
              +LGG + A
Sbjct:   318 IFLGGVIGA 326

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2118686 UMAMIT34 "AT4G30420" [Arabidopsis thaliana (taxid:3702)]

 Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
 Identities = 118/310 (38%), Positives = 177/310 (57%)

Query:    24 LAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIXXXXXXXXXXXXEKKERPAMTL- 82
             +AM  +Q  YAG  + +RA L  G+S  VF +YR                +K + A++  
Sbjct:     1 MAMTMIQLCYAGVTLFARATLVHGLSPRVFILYRQAFATIFIFPFLYLSRRKSKIAISSL 60

Query:    83 ---NFALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVR 139
                +F+L F L++L+GIT NQ  YL GL  TS +  SA+ N +PAITFL++ +   EK+ 
Sbjct:    61 DLKSFSLIF-LVSLIGITINQNLYLEGLYLTSSSMGSAVGNIIPAITFLISFLAGYEKLN 119

Query:   140 LDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGK 199
             L    G+AK+ GT+ CVAGA  +TL +GP I      LN      +  ++   LG  K +
Sbjct:   120 LRDIRGLAKIAGTILCVAGAISMTLLRGPKI------LNSESALPIAKSV---LGHLKDQ 170

Query:   200 N-WTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNL 258
             N W +GC++L    L WS WL++Q P+   YP  LS++A+ C FG IQ  ++    E++ 
Sbjct:   171 NTWLIGCLFLFSSTLCWSFWLILQVPISAYYPDNLSLSAWMCLFGTIQCAVVTFFLEKDP 230

Query:   259 DAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFAL 318
             +AWI H+  E  + LYAG+ AS ++F VQ W I + GPVF A++ P+ T++V I+A+   
Sbjct:   231 NAWILHSYSEFATCLYAGIGASALSFTVQAWAIAKRGPVFSALFNPLCTVIVTILAALFF 290

Query:   319 GEEFYLGGYV 328
              EE Y G  +
Sbjct:   291 HEEIYTGSLI 300

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2039792 UMAMIT14 "AT2G39510" [Arabidopsis thaliana (taxid:3702)]

 Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
 Identities = 116/303 (38%), Positives = 174/303 (57%)

Query:    24 LAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIXXXXXXXXXXXXEKKERPAMTLN 83
             + +V+LQFGYAG  ++++ ALN G+S  V   YR+I+            ++K RP MTL+
Sbjct:    10 ITVVSLQFGYAGLSIIAKFALNQGMSPHVLASYRHIVATIFIAPFAYFLDRKIRPKMTLS 69

Query:    84 FALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRK 143
                + +LL L+  T +Q  Y  G++ TS TF +A+ N +PA  F+MA IFR+EKV + + 
Sbjct:    70 IFFKILLLGLLEPTIDQNLYYTGMKYTSATFTAAMTNVLPAFAFIMAWIFRLEKVNVKKI 129

Query:   144 DGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTL 203
                AK++GT+  V GA ++T+ KGP I  P    + I  DS  + +   L   KG +   
Sbjct:   130 HSQAKILGTIVTVGGAMLMTVVKGPLIPLPWANPHDIHQDSSNTGVKQDL--TKGAS--- 184

Query:   204 GCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFER-NLDAWI 262
               +  IG C+ W+G++ +QA  LK YP  LS+TAY CF G I+  I+A   ER N  AW 
Sbjct:   185 --LIAIG-CICWAGFINLQAITLKSYPVELSLTAYICFLGSIESTIVALFIERGNPSAWA 241

Query:   263 FHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEF 322
              H   ++ + +Y GV+ SGI + VQ   +   GPVFV  + P+  ++VAI+ S  L E  
Sbjct:   242 IHLDSKLLAAVYGGVICSGIGYYVQGVIMKTRGPVFVTAFNPLSMVIVAILGSIILAEVM 301

Query:   323 YLG 325
             +LG
Sbjct:   302 FLG 304

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2132447 UMAMIT20 "Usually multiple acids move in and out Transporters 20" [Arabidopsis thaliana (taxid:3702)]

 Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
 Identities = 115/307 (37%), Positives = 175/307 (57%)

Query:    19 KLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIXXXXXXXXXXXXEKKERP 78
             KL+ +L M+ LQFG AG ++V  A LN G ++ V  VYRN++            E+K RP
Sbjct:    10 KLRPYLLMIFLQFGAAGTYIVIMATLNQGQNRYVVIVYRNLVAALVLAPFALIFERKVRP 69

Query:    79 AMTLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKV 138
              MTL+   + + L  +    +QGF  LG+  TS T+ SAI N +P++TF++A I R+EKV
Sbjct:    70 KMTLSVLWKIMALGFLEPVLDQGFGYLGMNMTSATYTSAIMNILPSVTFIIAWILRMEKV 129

Query:   139 RLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKG 198
              +      AK++GTL  + GA V+TLYKGP I  P    N  Q +  T+           
Sbjct:   130 NIAEVRSKAKIIGTLVGLGGALVMTLYKGPLIPLPWSNPNMDQQNGHTNN------SQDH 183

Query:   199 KNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNL 258
              NW +G + ++  C++WSG+ V+Q+  +K YPA LS++A  C  G +Q   +A + ER+ 
Sbjct:   184 NNWVVGTLLILLGCVAWSGFYVLQSITIKTYPADLSLSALICLAGAVQSFAVALVVERHP 243

Query:   259 DAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFAL 318
               W       +F+ LY G+V+SGI + VQ   +   GPVFV  + P+  ++VA++ASF L
Sbjct:   244 SGWAVGWDARLFAPLYTGIVSSGITYYVQGMVMKTRGPVFVTAFNPLCMILVALIASFIL 303

Query:   319 GEEFYLG 325
              E+ + G
Sbjct:   304 HEQIHFG 310

GO:0005576 "extracellular region" evidence=ISM

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2012255 UMAMIT25 "Usually multiple acids move in and out Transporters 25" [Arabidopsis thaliana (taxid:3702)]

 Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
 Identities = 111/306 (36%), Positives = 168/306 (54%)

Query:    24 LAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIXXXXXXXXXXXXEKKERPAMTLN 83
             LAMV +Q GYAG ++ S+ A+  G+  L+   YR I             E+K RP +TL 
Sbjct:    10 LAMVLVQIGYAGMNITSKMAMEAGMKPLILVAYRQIFATIATFPVAFFLERKTRPKITLR 69

Query:    84 FALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRK 143
               +Q    ++ G T NQ  Y +GL+N+SPT A A+ N +PA+TFL+AAIFR E V + + 
Sbjct:    70 ILVQVFFCSITGATGNQVLYFVGLQNSSPTIACALTNLLPAVTFLLAAIFRQETVGIKKA 129

Query:   144 DGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKG-KNWT 202
              G AKV+GTL CV GA V++ Y G TI      ++    +++T       G + G  N+ 
Sbjct:   130 SGQAKVIGTLVCVIGAMVLSFYHGHTIGIGESKIHWAYAENITKH-----GSSSGHSNFF 184

Query:   203 LGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWI 262
             LG   ++   +SW+ W ++Q  + + + A  + T   C  G IQ   IA I +  +  W 
Sbjct:   185 LGPFLIMAAAVSWAAWFIIQTKMSETFAAPYTSTLLMCLMGSIQCGAIALISDHTISDWS 244

Query:   263 FHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEF 322
               +     S LYAGVVAS +AF +  W + R GP++V+V+ P+  +VVAI +   L E+ 
Sbjct:   245 LSSPLRFISALYAGVVASALAFCLMSWAMQRKGPLYVSVFSPLLLVVVAIFSWALLEEKL 304

Query:   323 YLGGYV 328
             Y G ++
Sbjct:   305 YTGTFM 310

GO:0016020 "membrane" evidence=IEA;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q94AP3	WAT1_ARATH	No assigned EC number	0.7696	0.8696	0.8406	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	376
PLN00411	358	PLN00411, PLN00411, nodulin MtN21 family protein;	8e-36
pfam00892	126	pfam00892, EamA, EamA-like transporter family	3e-06
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	3e-05
pfam00892	126	pfam00892, EamA, EamA-like transporter family	0.001

>gnl|CDD|177805 PLN00411, PLN00411, nodulin MtN21 family protein; Provisional

 Score =  133 bits (336), Expect = 8e-36
 Identities = 89/306 (29%), Positives = 159/306 (51%), Gaps = 16/306 (5%)

Query: 25  AMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEK-KERPAMTLN 83
           AM+A +    G   + + A + G++   F  Y  ++A LLLLP  +F  + +  P ++++
Sbjct: 17  AMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVS 76

Query: 84  FALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRK 143
              +  LL  +G       Y+ G+E ++PT ASAI N  PA+TF++A IFR+EKV    +
Sbjct: 77  ILSKIGLLGFLGSMYVITGYI-GIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKER 135

Query: 144 DGIAKVVGTLFCVAGATVITLYKGPTIY--SPAPPLNQIQ-PDSLTSTIFLSLGDAKGKN 200
             +AKV+GT+  + GA V+  Y GP ++  S  P LN  Q    L+S+           +
Sbjct: 136 SSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLSSS---------NSD 186

Query: 201 WTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVT-AYTCFFGLIQFMIIAAIFERNLD 259
           W +G   L    +  S   ++QA ++ +YPA  +V+  YT    ++  MI   + + N  
Sbjct: 187 WLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPS 246

Query: 260 AWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALG 319
            WI H    + +I+   ++ S + + +  W +   GP+++A+++P+  L+  +M +  L 
Sbjct: 247 VWIIHFDITLITIVTMAIITS-VYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLN 305

Query: 320 EEFYLG 325
           +  YLG
Sbjct: 306 DSLYLG 311

Length = 358

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 45.7 bits (109), Expect = 3e-06
 Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 8/134 (5%)

Query: 31  FGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFIL 90
             +A + V S+  L   IS L F  YR +IA +LL+    FL +K    ++L   L  + 
Sbjct: 1   LSWALYFVFSKKLLE-RISPLTFTAYRFLIAGILLI-LLLFLLRKPFALLSLKAILALLY 58

Query: 91  LALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVV 150
           L L G       Y   L+  S + AS I +  P  T +++ +       L  K  + +++
Sbjct: 59  LGLFGTALGYLLYFYALKYVSASNASVITSLSPVFTLILSVLL------LGEKLTLKQLL 112

Query: 151 GTLFCVAGATVITL 164
           G +  + G  +I L
Sbjct: 113 GIVLILLGVLLILL 126

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 44.9 bits (106), Expect = 3e-05
 Identities = 58/299 (19%), Positives = 111/299 (37%), Gaps = 41/299 (13%)

Query: 24  LAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLN 83
           LA++     +    +  + A+      L     R +IA LLLLP      +  RPA+   
Sbjct: 10  LALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRP- 68

Query: 84  FALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRK 143
             L  +LLAL+G+        L L+ TS + AS I   +P  T L+A +       L  +
Sbjct: 69  -WLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLL-----LGER 122

Query: 144 DGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTL 203
             + +++G L  +AG  +I L  G                                   L
Sbjct: 123 LSLLQILGILLALAGVLLILLGGGGGGILSL----------------------------L 154

Query: 204 GCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIF 263
           G +  +   L W+ +  +   + +  P  +++         +  +++  +          
Sbjct: 155 GLLLALAAALLWALYTALVKRLSRLGP--VTLALLLQLLLALLLLLLFFLSGFGAPILSR 212

Query: 264 HNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEF 322
                   +LY GV ++G+A+ +  + +   G   VA+   ++ +  A++    LGE  
Sbjct: 213 A----WLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPL 267

Length = 292

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 38.4 bits (90), Expect = 0.001
 Identities = 19/112 (16%), Positives = 48/112 (42%), Gaps = 4/112 (3%)

Query: 213 LSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSI 272
           LSW+ + V    +L++    L+ TAY      I  +++  +  +    +   +   + ++
Sbjct: 1   LSWALYFVFSKKLLERISP-LTFTAYRFLIAGILLILLLFLLRKP---FALLSLKAILAL 56

Query: 273 LYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYL 324
           LY G+  + + + +  + +        +V   +  +   I++   LGE+  L
Sbjct: 57  LYLGLFGTALGYLLYFYALKYVSASNASVITSLSPVFTLILSVLLLGEKLTL 108

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	376
PLN00411	358	nodulin MtN21 family protein; Provisional	100.0
PRK11272	292	putative DMT superfamily transporter inner membran	100.0
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.97
PRK11689	295	aromatic amino acid exporter; Provisional	99.97
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.97
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.97
PRK15430	296	putative chloramphenical resistance permease RarD;	99.97
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.96
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.95
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.94
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.93
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.91
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.91
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.88
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.88
COG2962	293	RarD Predicted permeases [General function predict	99.86
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.86
KOG2765	416	consensus Predicted membrane protein [Function unk	99.76
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.75
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.65
COG2510	140	Predicted membrane protein [Function unknown]	99.59
COG2510	140	Predicted membrane protein [Function unknown]	99.56
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.5
KOG1580	337	consensus UDP-galactose transporter related protei	99.49
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.45
KOG2766	336	consensus Predicted membrane protein [Function unk	99.45
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.44
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.36
KOG1581	327	consensus UDP-galactose transporter related protei	99.32
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.25
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.22
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.13
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	99.12
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.04
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.03
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.01
PRK11272	292	putative DMT superfamily transporter inner membran	98.99
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.98
PRK15430	296	putative chloramphenical resistance permease RarD;	98.97
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	98.95
PLN00411	358	nodulin MtN21 family protein; Provisional	98.94
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.94
PRK11689	295	aromatic amino acid exporter; Provisional	98.86
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.82
PRK13499	345	rhamnose-proton symporter; Provisional	98.81
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	98.78
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.78
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.77
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	98.75
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.71
KOG3912	372	consensus Predicted integral membrane protein [Gen	98.7
KOG1582	367	consensus UDP-galactose transporter related protei	98.69
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	98.67
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.55
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.53
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.5
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.44
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.4
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	98.38
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	98.33
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.29
COG2962	293	RarD Predicted permeases [General function predict	98.21
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.18
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	98.18
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	98.17
KOG4510	346	consensus Permease of the drug/metabolite transpor	98.07
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.06
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.93
KOG2922	335	consensus Uncharacterized conserved protein [Funct	97.81
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.69
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.59
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.45
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.28
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	97.21
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.14
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.09
PRK13499	345	rhamnose-proton symporter; Provisional	97.05
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.02
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	97.0
KOG2765	416	consensus Predicted membrane protein [Function unk	96.99
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	96.83
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	96.78
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	96.76
COG2076	106	EmrE Membrane transporters of cations and cationic	96.75
PRK11431	105	multidrug efflux system protein; Provisional	96.7
PRK09541	110	emrE multidrug efflux protein; Reviewed	96.6
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.55
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.47
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.43
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	96.36
COG2076	106	EmrE Membrane transporters of cations and cationic	96.32
PRK11431	105	multidrug efflux system protein; Provisional	96.04
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	95.66
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	95.59
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	95.56
KOG1581	327	consensus UDP-galactose transporter related protei	95.38
KOG1580	337	consensus UDP-galactose transporter related protei	95.0
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	94.71
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	94.71
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	93.85
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	92.85
KOG4831	125	consensus Unnamed protein [Function unknown]	92.57
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	92.53
KOG2922	335	consensus Uncharacterized conserved protein [Funct	92.28
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	90.08
KOG1443	349	consensus Predicted integral membrane protein [Fun	86.82
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	80.13
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	80.04

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=100.00  E-value=1.2e-35  Score=286.41  Aligned_cols=312  Identities=26%  Similarity=0.497  Sum_probs=248.3

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhh-ccCCCCCHHHHHHHHHHHHHHH
Q 017167           18 EKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEK-KERPAMTLNFALQFILLALVGI   96 (376)
Q Consensus        18 ~~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~   96 (376)
                      |+.+++..|++..+.++...++.|.+.+.|++|..+.++|+.+++++++++.+.+++ +.+++.+++++.++.+.|+++ 
T Consensus        10 ~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g-   88 (358)
T PLN00411         10 REAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLG-   88 (358)
T ss_pred             hccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHH-
Confidence            356789999999999999999999999999999999999999999999999876544 233445678889999999998 


Q ss_pred             HHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCC
Q 017167           97 TANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPP  176 (376)
Q Consensus        97 ~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~  176 (376)
                      ...+.+++.|++++++++++++.++.|+++.+++++++.|+++.+||.++.+++|++++++|+.++..++++.... +++
T Consensus        89 ~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~-~~~  167 (358)
T PLN00411         89 SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFV-ASS  167 (358)
T ss_pred             HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccc-ccc
Confidence            5788899999999999999999999999999999999655555555555579999999999999987544321100 000


Q ss_pred             --------CCCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHH
Q 017167          177 --------LNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFM  248 (376)
Q Consensus       177 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (376)
                              ..++.++             ...+...|++++++++++|++|++++|+..+++++....+++++..+.+...
T Consensus       168 ~~~~~~~~~~~~~~~-------------~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~  234 (358)
T PLN00411        168 PPYLNFRQLSPPLSS-------------SNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTS  234 (358)
T ss_pred             cccccccccccccCC-------------CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHH
Confidence                    0000001             2234567999999999999999999999999986555667788887777776


Q ss_pred             HHHHHhhc-CcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccc
Q 017167          249 IIAAIFER-NLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGY  327 (376)
Q Consensus       249 ~~~~~~~~-~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~  327 (376)
                      +.....++ +...|..........+++.+++ +.++|.+|++++++.+|++++++.+++|+++++++++++||++++.++
T Consensus       235 ~~~l~~~~~~~~~~~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~  313 (358)
T PLN00411        235 MIGLVVEKNNPSVWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCL  313 (358)
T ss_pred             HHHHHHccCCcccceeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHH
Confidence            66665443 2222221122234457777776 678999999999999999999999999999999999999999999999


Q ss_pred             cchhhhhhhhhhcccccc
Q 017167          328 VPATSPARSILLPNRWMS  345 (376)
Q Consensus       328 iG~~lI~~gi~l~~~~~~  345 (376)
                      +|+++|+.|+++.+++++
T Consensus       314 iG~~LIl~Gv~l~~~~~~  331 (358)
T PLN00411        314 IGGILITLGFYAVMWGKA  331 (358)
T ss_pred             HHHHHHHHHHHHHHhhhh
Confidence            999999999999875433

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=100.00  E-value=2.2e-31  Score=251.83  Aligned_cols=279  Identities=18%  Similarity=0.195  Sum_probs=233.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017167           22 LHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQG  101 (376)
Q Consensus        22 g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  101 (376)
                      -++..++..++||.+++..|...+ +++|.+++++|+.++.++++++...+++ +  ..+++++......|.++...++.
T Consensus         9 ~~~~~~~~~~iWg~~~~~~K~~~~-~~~p~~~~~~R~~~a~l~ll~~~~~~~~-~--~~~~~~~~~~~~~g~~~~~~~~~   84 (292)
T PRK11272          9 LFGALFALYIIWGSTYLVIRIGVE-SWPPLMMAGVRFLIAGILLLAFLLLRGH-P--LPTLRQWLNAALIGLLLLAVGNG   84 (292)
T ss_pred             HHHHHHHHHHHHhhHHHHHHHHhc-cCCHHHHHHHHHHHHHHHHHHHHHHhCC-C--CCcHHHHHHHHHHHHHHHHHHHH
Confidence            356678888999999999999988 5999999999999999998888755322 2  23567788888899887677888


Q ss_pred             HHHHhc-ccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCCCCCC
Q 017167          102 FYLLGL-ENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQI  180 (376)
Q Consensus       102 ~~~~al-~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~~~~~  180 (376)
                      +++++. ++++++.++++.++.|+++.+++++ +|||+++      .+++|++++++|+.++.. +++            
T Consensus        85 ~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~------~~~~~~~la~~Gv~ll~~-~~~------------  144 (292)
T PRK11272         85 MVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRK------LEWLGIAIGLAGIVLLNS-GGN------------  144 (292)
T ss_pred             HHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCch------hHHHHHHHHHHhHHHHhc-Ccc------------
Confidence            999998 9999999999999999999999986 6999999      599999999999998851 111            


Q ss_pred             CCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCccc
Q 017167          181 QPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDA  260 (376)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (376)
                                      . +....|++++++++++|+.|.+..||..++  ++...+.+++..+.+...+.....+.+.. 
T Consensus       145 ----------------~-~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  204 (292)
T PRK11272        145 ----------------L-SGNPWGAILILIASASWAFGSVWSSRLPLP--VGMMAGAAEMLAAGVVLLIASLLSGERLT-  204 (292)
T ss_pred             ----------------c-ccchHHHHHHHHHHHHHHHHHHHHHhcCCC--cchHHHHHHHHHHHHHHHHHHHHcCCccc-
Confidence                            1 123579999999999999999999986543  34566788888888877776654332211 


Q ss_pred             ccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhc
Q 017167          261 WIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLP  340 (376)
Q Consensus       261 ~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~  340 (376)
                       ...+...|..+++.+++++.+++.+|++++++.++++++.+.+++|+++++++++++||++++.+++|+++|+.|+++.
T Consensus       205 -~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~  283 (292)
T PRK11272        205 -ALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLV  283 (292)
T ss_pred             -ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHH
Confidence             1124467889999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             ccccc
Q 017167          341 NRWMS  345 (376)
Q Consensus       341 ~~~~~  345 (376)
                      +++++
T Consensus       284 ~~~~~  288 (292)
T PRK11272        284 TLGKY  288 (292)
T ss_pred             HHHHh
Confidence            76544

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.97  E-value=9.5e-31  Score=248.24  Aligned_cols=276  Identities=13%  Similarity=0.175  Sum_probs=214.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017167           23 HLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGF  102 (376)
Q Consensus        23 ~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  102 (376)
                      .+++++++++||.+++..|...++ ++|..+.++|+.++++.+.++..   ++   +.++   ......|+......+.+
T Consensus         6 ~l~~l~~~~~Wg~~~~~~k~~~~~-~~p~~~~~~R~~~a~~~l~~~~~---~~---~~~~---~~~~~~g~~~~~~~~~~   75 (299)
T PRK11453          6 GVLALLVVVVWGLNFVVIKVGLHN-MPPLMLAGLRFMLVAFPAIFFVA---RP---KVPL---NLLLGYGLTISFGQFAF   75 (299)
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHHHhc---CC---CCch---HHHHHHHHHHHHHHHHH
Confidence            456889999999999999999984 99999999999998776665542   11   1122   23444455544456667


Q ss_pred             HHHhccc-CCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCCCCCCC
Q 017167          103 YLLGLEN-TSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQ  181 (376)
Q Consensus       103 ~~~al~~-~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~  181 (376)
                      ++.++++ .++++++++.++.|+++.+++++++|||++.+      ++++++++++|+.++.  .++..           
T Consensus        76 ~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~------~~~~~~l~~~Gv~ll~--~~~~~-----------  136 (299)
T PRK11453         76 LFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGK------QLAGIALAIFGVLVLI--EDSLN-----------  136 (299)
T ss_pred             HHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHhHHHhc--cccCC-----------
Confidence            7889888 58899999999999999999999999999994      9999999999999886  22110           


Q ss_pred             CCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCc--chhHHHHHHHHHHHHHHHHHHhhcCc-
Q 017167          182 PDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPAR--LSVTAYTCFFGLIQFMIIAAIFERNL-  258 (376)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-  258 (376)
                                     ....+..|+.++++++++|+.|.++.|+..++.+++  .....+.+..+.+.........+.+. 
T Consensus       137 ---------------~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (299)
T PRK11453        137 ---------------GQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSAT  201 (299)
T ss_pred             ---------------CcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchh
Confidence                           112234799999999999999999999987665322  23344555555444443333333221 


Q ss_pred             --ccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhh
Q 017167          259 --DAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARS  336 (376)
Q Consensus       259 --~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~g  336 (376)
                        ..+...+...|..+++.++++++++|.+|++++++.++.+++.+.+++|+++.+++++++||++++.+++|+++|+.|
T Consensus       202 ~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~g  281 (299)
T PRK11453        202 MIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAG  281 (299)
T ss_pred             hhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHH
Confidence              111223456788999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhccc
Q 017167          337 ILLPNR  342 (376)
Q Consensus       337 i~l~~~  342 (376)
                      +++..+
T Consensus       282 v~l~~~  287 (299)
T PRK11453        282 LYINVF  287 (299)
T ss_pred             HHHHhc
Confidence            998653

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.97  E-value=3.2e-30  Score=244.19  Aligned_cols=281  Identities=13%  Similarity=0.113  Sum_probs=211.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHHH
Q 017167           20 LQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITAN   99 (376)
Q Consensus        20 ~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   99 (376)
                      .+++++++++.++||.+++..|...++ ++|..+.++|+.++.+++.++..   +++.   + ++.++....+.++.+.+
T Consensus         3 ~~~~l~~l~a~~~Wg~~~~~~k~~~~~-~~P~~~~~~R~~~a~l~l~~~~~---~~~~---~-~~~~~~~~~~~l~~~~~   74 (295)
T PRK11689          3 QKATLIGLIAILLWSTMVGLIRGVSES-LGPVGGAAMIYSVSGLLLLLTVG---FPRL---R-QFPKRYLLAGGLLFVSY   74 (295)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHcc-CChHHHHHHHHHHHHHHHHHHcc---cccc---c-cccHHHHHHHhHHHHHH
Confidence            456788999999999999999999984 99999999999999998887631   1111   1 11223444555556677


Q ss_pred             HHHHHHhcc----cCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCC
Q 017167          100 QGFYLLGLE----NTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAP  175 (376)
Q Consensus       100 ~~~~~~al~----~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~  175 (376)
                      ..+++.+++    ..++.+++++.++.|+++.+++++++|||+++      .+++|++++++|+.++.. .++....   
T Consensus        75 ~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~------~~~~g~~l~~~Gv~li~~-~~~~~~~---  144 (295)
T PRK11689         75 EICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANW------LLIPGLLLALAGVAWVLG-GDNGLSL---  144 (295)
T ss_pred             HHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccH------HHHHHHHHHHHhHhheec-CCccchh---
Confidence            777777775    46778888999999999999999999999999      599999999999999862 1110000   


Q ss_pred             CCCCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhh
Q 017167          176 PLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFE  255 (376)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (376)
                        .+. .+             +..+...|+.++++++++|+.|.++.||..+++ ++...  .. ..+.+.+.+.... +
T Consensus       145 --~~~-~~-------------~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~-~~~~~--~~-~~~~~~l~~~~~~-~  203 (295)
T PRK11689        145 --AEL-IN-------------NIASNPLSYGLAFIGAFIWAAYCNVTRKYARGK-NGITL--FF-ILTALALWIKYFL-S  203 (295)
T ss_pred             --hhh-hh-------------ccccChHHHHHHHHHHHHHHHHHHHHhhccCCC-CchhH--HH-HHHHHHHHHHHHH-h
Confidence              000 00             111235699999999999999999999987665 45443  22 2233333332332 2


Q ss_pred             cCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhh
Q 017167          256 RNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPAR  335 (376)
Q Consensus       256 ~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~  335 (376)
                      +.. . ...+...|..+++.++ +++++|.+|++++|+.++++++.+.+++|+++.+++++++||++++.+++|+++|+.
T Consensus       204 ~~~-~-~~~~~~~~~~l~~~~~-~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~  280 (295)
T PRK11689        204 PQP-A-MVFSLPAIIKLLLAAA-AMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTA  280 (295)
T ss_pred             cCc-c-ccCCHHHHHHHHHHHH-HHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHH
Confidence            221 1 1224466777888785 689999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhccc
Q 017167          336 SILLPNR  342 (376)
Q Consensus       336 gi~l~~~  342 (376)
                      |+++...
T Consensus       281 gv~~~~~  287 (295)
T PRK11689        281 GSLLCWL  287 (295)
T ss_pred             hHHHHhh
Confidence            9977653

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.97  E-value=9e-30  Score=236.42  Aligned_cols=259  Identities=19%  Similarity=0.224  Sum_probs=219.6

Q ss_pred             HHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCc
Q 017167           33 YAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFYLLGLENTSP  112 (376)
Q Consensus        33 ~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~  112 (376)
                      ||.+++..|...+++.++.+..+.|++.+.+++.++...+       .+++++.+.+..|.++..+++.++++|++++++
T Consensus         1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~   73 (260)
T TIGR00950         1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR-------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPV   73 (260)
T ss_pred             CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc-------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence            8999999999988668999999999999988887765431       245667788899988888999999999999999


Q ss_pred             cceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCCCCCCCCCCcchhhhcc
Q 017167          113 TFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLS  192 (376)
Q Consensus       113 ~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (376)
                      ++++++.++.|+++.+++++++|||+++      .+++|++++++|+.++. ..+                         
T Consensus        74 ~~~~ii~~~~P~~~~~~~~l~~~e~~~~------~~~~gi~i~~~Gv~li~-~~~-------------------------  121 (260)
T TIGR00950        74 GEAALLLYLAPLYVTLLSDLMGKERPRK------LVLLAAVLGLAGAVLLL-SDG-------------------------  121 (260)
T ss_pred             hhhHHHHhhhHHHHHHHHHHHccCCCcH------HHHHHHHHHHHhHHhhc-cCC-------------------------
Confidence            9999999999999999999999999999      59999999999999985 221                         


Q ss_pred             ccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCC-CcchhHHHHHHHHHHHHHHHHHHhhcCcccccccCCchhHH
Q 017167          193 LGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYP-ARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFS  271 (376)
Q Consensus       193 ~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (376)
                          +.+....|+.++++++++|+.+.+..|+..++.+ ++.....+++..+.+...+.....++.. .   .+...|..
T Consensus       122 ----~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~---~~~~~~~~  193 (260)
T TIGR00950       122 ----NLSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-Q---ALSLQWGA  193 (260)
T ss_pred             ----cccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-C---cchHHHHH
Confidence                1123468999999999999999999999887663 2334455678888888877766433221 1   14456777


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhh
Q 017167          272 ILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSIL  338 (376)
Q Consensus       272 ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~  338 (376)
                      +++.+++++.+++.+|++++++.++.+++.+.+++|+++.+++++++||++++.+++|..+++.|+.
T Consensus       194 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~  260 (260)
T TIGR00950       194 LLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence            8999999899999999999999999999999999999999999999999999999999999999863

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.97  E-value=2.1e-29  Score=238.33  Aligned_cols=274  Identities=11%  Similarity=0.103  Sum_probs=220.2

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHH
Q 017167           18 EKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGIT   97 (376)
Q Consensus        18 ~~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   97 (376)
                      ++.+++.++++++++|+.+..+.|++.++ .+|.++.++|++++.++++++...  ++  .+.++++++..+..|.+. .
T Consensus         9 ~~~~~~~~~~la~~~~~~~~~~~K~~~~~-~~~~~~~~~R~~~a~l~l~~~~~~--~~--~~~~~~~~~~~~~~g~~~-~   82 (293)
T PRK10532          9 PVWLPILLLLIAMASIQSGASLAKSLFPL-VGAPGVTALRLALGTLILIAIFKP--WR--LRFAKEQRLPLLFYGVSL-G   82 (293)
T ss_pred             ccchHHHHHHHHHHHHHhhHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHhH--Hh--ccCCHHHHHHHHHHHHHH-H
Confidence            45789999999999999999999999995 999999999999999988876532  11  134567778888888874 6


Q ss_pred             HHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCCC
Q 017167           98 ANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPL  177 (376)
Q Consensus        98 ~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~~  177 (376)
                      ..+.++++++++++++.++++.++.|+++.+++.    ||..        +..++.++++|+.++. ..+..        
T Consensus        83 ~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~--------~~~~~~i~~~Gv~li~-~~~~~--------  141 (293)
T PRK10532         83 GMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPV--------DFVWVVLAVLGLWFLL-PLGQD--------  141 (293)
T ss_pred             HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChH--------HHHHHHHHHHHHheee-ecCCC--------
Confidence            7888899999999999999999999999998863    4322        3345778899998875 22211        


Q ss_pred             CCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcC
Q 017167          178 NQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERN  257 (376)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (376)
                                         .+.....|++++++++++|+.|.+..|+..+++ ++... .++...+.+.+.++....+. 
T Consensus       142 -------------------~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~-~~~~~-~~~~~~~~~~l~~~~~~~~~-  199 (293)
T PRK10532        142 -------------------VSHVDLTGAALALGAGACWAIYILSGQRAGAEH-GPATV-AIGSLIAALIFVPIGALQAG-  199 (293)
T ss_pred             -------------------cccCChHHHHHHHHHHHHHHHHHHHHHHHhccC-CchHH-HHHHHHHHHHHHHHHHHccC-
Confidence                               112235799999999999999999999987776 45554 45666667666666654321 


Q ss_pred             cccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhh
Q 017167          258 LDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSI  337 (376)
Q Consensus       258 ~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi  337 (376)
                      ...   .+...+..+++.|++++.++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|+.|+
T Consensus       200 ~~~---~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~  276 (293)
T PRK10532        200 EAL---WHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAAS  276 (293)
T ss_pred             ccc---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHH
Confidence            111   13344556789999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcccc
Q 017167          338 LLPNRW  343 (376)
Q Consensus       338 ~l~~~~  343 (376)
                      +...++
T Consensus       277 ~~~~~~  282 (293)
T PRK10532        277 MGSTLT  282 (293)
T ss_pred             HHHHhc
Confidence            987543

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.97  E-value=9.8e-30  Score=240.93  Aligned_cols=277  Identities=13%  Similarity=0.074  Sum_probs=206.7

Q ss_pred             ccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccC--C-CCCHHHHHHHHHH
Q 017167           15 SVPEKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKER--P-AMTLNFALQFILL   91 (376)
Q Consensus        15 ~~~~~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~--~-~~~~~~~~~~~~~   91 (376)
                      +++++.+|++++++++++||...++.|.. + +++|.++.++|+.++.+++.++...+++...  + ..+++++. ....
T Consensus         2 ~~~~~~~g~~~~l~a~~~wg~~~~~~k~~-~-~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~   78 (296)
T PRK15430          2 DAKQTRQGVLLALAAYFIWGIAPAYFKLI-Y-YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIF-MLAV   78 (296)
T ss_pred             CchhhhhHHHHHHHHHHHHHHHHHHHHHh-c-CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHH-HHHH
Confidence            34567789999999999999999999985 5 4999999999999999888777654321110  0 11334433 3446


Q ss_pred             HHHHHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCccc
Q 017167           92 ALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIY  171 (376)
Q Consensus        92 g~~~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~  171 (376)
                      +.++.+.++.++++|++++++++++++.++.|+++.+++++++|||+++      .+++|++++++|+.++.. .  .  
T Consensus        79 ~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~------~~~~g~~l~~~Gv~li~~-~--~--  147 (296)
T PRK15430         79 SAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRR------MQWLAVILAICGVLVQLW-T--F--  147 (296)
T ss_pred             HHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcH------HHHHHHHHHHHHHHHHHH-H--c--
Confidence            6666788999999999999999999999999999999999999999999      599999999999999862 1  1  


Q ss_pred             CCCCCCCCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCC-CcchhHHHHHHHHHHHHHHH
Q 017167          172 SPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYP-ARLSVTAYTCFFGLIQFMII  250 (376)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  250 (376)
                                               ++.     ..++++++++|+.|.+..|+..++.. +....+.+....+.....+.
T Consensus       148 -------------------------~~~-----~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (296)
T PRK15430        148 -------------------------GSL-----PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI  197 (296)
T ss_pred             -------------------------CCc-----cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH
Confidence                                     111     14678899999999999888643221 11222333333333322211


Q ss_pred             HHHhhcCcccccccCCch-hHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccc
Q 017167          251 AAIFERNLDAWIFHNGGE-VFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVP  329 (376)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~-~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG  329 (376)
                         .......+. .++.. +..+++.|+ .+.+++.+|++++++.++++++++.+++|+++.+++++++||++++.+++|
T Consensus       198 ---~~~~~~~~~-~~~~~~~~~~~~~g~-~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G  272 (296)
T PRK15430        198 ---ADSSTSHMG-QNPMSLNLLLIAAGI-VTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVT  272 (296)
T ss_pred             ---ccCCccccc-CCcHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHH
Confidence               111111111 11222 333444555 588999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhhhc
Q 017167          330 ATSPARSILLP  340 (376)
Q Consensus       330 ~~lI~~gi~l~  340 (376)
                      +++|+.|+.+.
T Consensus       273 ~~lI~~~~~v~  283 (296)
T PRK15430        273 FAFIWVALAIF  283 (296)
T ss_pred             HHHHHHHHHHH
Confidence            99998777664

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.96  E-value=2e-27  Score=225.83  Aligned_cols=281  Identities=14%  Similarity=0.078  Sum_probs=219.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017167           24 LAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFY  103 (376)
Q Consensus        24 ~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  103 (376)
                      ++.++.-++-....++.|.+.++...|...++.|+.++.+...+.. ..+.+++++.+++++++.+..|++. +....+.
T Consensus         5 ~~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~   82 (302)
T TIGR00817         5 LLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSW-SSGLPKRLKISSALLKLLLPVAIVH-TIGHVTS   82 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHH-HhCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHH
Confidence            3444555555566688999998536689999999999877665552 2222334557889999999999996 7889999


Q ss_pred             HHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCCCCCCCCC
Q 017167          104 LLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPD  183 (376)
Q Consensus       104 ~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~  183 (376)
                      +++++++++++++++.++.|+++++++++++|||++.      .++.+++++++|+.+..  .++               
T Consensus        83 ~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~------~~~~~l~l~~~Gv~l~~--~~~---------------  139 (302)
T TIGR00817        83 NVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPS------TLWLSLLPIVGGVALAS--DTE---------------  139 (302)
T ss_pred             HHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcH------HHHHHHHHHHHHHhhhc--CCc---------------
Confidence            9999999999999999999999999999999999999      49999999999998653  111               


Q ss_pred             CcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhh--hCCCcchhHHHHHHHHHHHHHHHHHHhhcCccc-
Q 017167          184 SLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLK--KYPARLSVTAYTCFFGLIQFMIIAAIFERNLDA-  260 (376)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  260 (376)
                                    .+....|++++++++++|++|.++.||..+  ++ ++...+.+++..+.+.++|.....++.... 
T Consensus       140 --------------~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~-~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~  204 (302)
T TIGR00817       140 --------------LSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSL-DKTNLYAYISIMSLFLLSPPAFITEGPPFLP  204 (302)
T ss_pred             --------------ccccHHHHHHHHHHHHHHHHHHHHHHHhhccCCC-CcccHHHHHHHHHHHHHHHHHHHHcchHHHH
Confidence                          122357999999999999999999999887  55 688999999999999999987765431111 


Q ss_pred             --ccc----cCCch-hHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhh
Q 017167          261 --WIF----HNGGE-VFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSP  333 (376)
Q Consensus       261 --~~~----~~~~~-~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI  333 (376)
                        +..    ..... +...+..+..+....+.++++++++.+|++.++..+++|+++++++++++||++++.+++|++++
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~li  284 (302)
T TIGR00817       205 HGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIA  284 (302)
T ss_pred             HHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHH
Confidence              000    00011 11122222222233334666899999999999999999999999999999999999999999999


Q ss_pred             hhhhhhccccc
Q 017167          334 ARSILLPNRWM  344 (376)
Q Consensus       334 ~~gi~l~~~~~  344 (376)
                      +.|+++.++.+
T Consensus       285 l~Gv~l~~~~k  295 (302)
T TIGR00817       285 IAGVFLYSRVK  295 (302)
T ss_pred             HHHHHHHHHHh
Confidence            99999998643

specificities overlap.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.95  E-value=1.9e-26  Score=216.84  Aligned_cols=275  Identities=12%  Similarity=0.146  Sum_probs=203.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhh-hccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017167           23 HLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLE-KKERPAMTLNFALQFILLALVGITANQG  101 (376)
Q Consensus        23 ~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~  101 (376)
                      +++.++++++|+..++..|...++ -++  ..+++.....+++.++...+. +++++..++ +++..+..+.++...++.
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~-~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~   78 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADK-EPD--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPA-TFWLLLAISAVANMVYFL   78 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCc-hhH--HHHHHHHHHHHHHHHHHHHhcccCCCCCcch-hhHHHHHHHHHHHHHHHH
Confidence            567899999999999999976653 333  457777777777777765431 223333333 444455555555688999


Q ss_pred             HHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCCCCCCC
Q 017167          102 FYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQ  181 (376)
Q Consensus       102 ~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~  181 (376)
                      +++.|+++.++++++++.++.|+++++++++++|||+++      .+++|+.+++.|+.++.. + +.            
T Consensus        79 ~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~------~~~~g~~~~~~Gv~ll~~-~-~~------------  138 (281)
T TIGR03340        79 GLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSP------LAWLGILIITLGLLVLGL-S-RF------------  138 (281)
T ss_pred             HHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCH------HHHHHHHHHHHHHHHHhc-c-cc------------
Confidence            999999999999999999999999999999999999999      599999999999998862 1 11            


Q ss_pred             CCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHH-HHHHHHhh-cCcc
Q 017167          182 PDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQF-MIIAAIFE-RNLD  259 (376)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~  259 (376)
                                     . ..+..|+.++++++++|+.|.+..|+..++.+ +..........+.+.. .+...... .+..
T Consensus       139 ---------------~-~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (281)
T TIGR03340       139 ---------------A-QHRRKAYAWALAAALGTAIYSLSDKAAALGVP-AFYSALGYLGIGFLAMGWPFLLLYLKRHGR  201 (281)
T ss_pred             ---------------c-ccchhHHHHHHHHHHHHHHhhhhccccccchh-cccccHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence                           1 12246888999999999999999887654442 2221111122222221 22222111 0111


Q ss_pred             cccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhh
Q 017167          260 AWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILL  339 (376)
Q Consensus       260 ~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l  339 (376)
                      ... .+...++.+++.+.+++.++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|+.|+++
T Consensus       202 ~~~-~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       202 SMF-PYARQILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             chh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            111 1223455667778788999999999999999999999999999999999999999999999999999999999976

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.94  E-value=5.7e-25  Score=212.72  Aligned_cols=284  Identities=15%  Similarity=0.159  Sum_probs=224.4

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHHHHHHHHHhhhhccCCCC--CHHHHHHHHHHHHHH
Q 017167           19 KLQLHLAMVALQFGYAGFHVVSRAALNMGIS-KLVFPVYRNIIAFLLLLPFAYFLEKKERPAM--TLNFALQFILLALVG   95 (376)
Q Consensus        19 ~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~-~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~   95 (376)
                      +.+..++.+..-.+-.......|.+++. ++ |+.++.+|++++.++...++... .+++++.  .+++++..+..|+++
T Consensus        47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~llp~gl~~  124 (350)
T PTZ00343         47 KWKLALLFLTWYALNVLYVVDNKLALNM-LPLPWTISSLQLFVGWLFALLYWATG-FRKIPRIKSLKLFLKNFLPQGLCH  124 (350)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHHHHHHH
Confidence            5666667777777777788999999985 99 99999999999988765554332 2222333  355788899999998


Q ss_pred             HHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCC
Q 017167           96 ITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAP  175 (376)
Q Consensus        96 ~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~  175 (376)
                      .. .+...+.|+++++++.++++.++.|+++++++++++|||+++      .+++++++++.|+.+...  ++       
T Consensus       125 ~~-~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~------~~~l~l~l~v~Gv~l~~~--~~-------  188 (350)
T PTZ00343        125 LF-VHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNL------YAYLSLIPIVGGVALASV--KE-------  188 (350)
T ss_pred             HH-HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccH------HHHHHHHHHHHHHHheec--cc-------
Confidence            64 466677999999999999999999999999999999999999      599999999999999862  21       


Q ss_pred             CCCCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCC------CcchhHHHHHHHHHHHHHH
Q 017167          176 PLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYP------ARLSVTAYTCFFGLIQFMI  249 (376)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~  249 (376)
                                            .+.+..|++++++|+++|+.++++.|+..++.+      ++.+...++...+.+.++|
T Consensus       189 ----------------------~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp  246 (350)
T PTZ00343        189 ----------------------LHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLP  246 (350)
T ss_pred             ----------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHH
Confidence                                  122467999999999999999999999887542      2445566668899999998


Q ss_pred             HHHHhhcCc--cccc----ccCCchhHHHHHHHHHHHHHHHHHHHH----HHhcCCceeeeecchhHHHHHHHHHHHHhC
Q 017167          250 IAAIFERNL--DAWI----FHNGGEVFSILYAGVVASGIAFAVQIW----CIDRGGPVFVAVYQPVQTLVVAIMASFALG  319 (376)
Q Consensus       250 ~~~~~~~~~--~~~~----~~~~~~~~~ll~~g~~~~~~~~~l~~~----al~~~~a~~~s~~~~l~pv~a~l~~~l~l~  319 (376)
                      +....+...  ..+.    ..+...+..+++. ++.+++.+.+|+.    ++++.+|...++.++++|+++++++++++|
T Consensus       247 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~g  325 (350)
T PTZ00343        247 LVLFFEGKKWVPVWTNYTANMTNYTKGIIIFK-IFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQ  325 (350)
T ss_pred             HHHHHhhHHHHHHHHHhhhcccccchHHHHHH-HHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhC
Confidence            877554311  1110    0011122334443 4458899999985    999999999999999999999999999999


Q ss_pred             Cccccccccchhhhhhhhhhcccc
Q 017167          320 EEFYLGGYVPATSPARSILLPNRW  343 (376)
Q Consensus       320 e~~~~~~~iG~~lI~~gi~l~~~~  343 (376)
                      |++++.+++|+++++.|++++++-
T Consensus       326 e~lt~~~~iG~~lii~Gv~lYs~~  349 (350)
T PTZ00343        326 TQVTLLGYLGMAVAILGALLYSLF  349 (350)
T ss_pred             CCCchHhHHHHHHHHHHHHHHhhc
Confidence            999999999999999999998753

>TIGR00688 rarD rarD protein

Probab=99.93  E-value=1.8e-24  Score=200.76  Aligned_cols=248  Identities=11%  Similarity=0.067  Sum_probs=182.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhcc-----CCCCCHHH-HHHHHHHHHH
Q 017167           21 QLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKE-----RPAMTLNF-ALQFILLALV   94 (376)
Q Consensus        21 ~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~-----~~~~~~~~-~~~~~~~g~~   94 (376)
                      +|++++++++++||.+.++.|. .+ +++|.+++++|++++.+++.++...+++++     .++.++++ +..+...|++
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~-~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LK-PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hc-cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            4788999999999999999998 45 499999999999999988877664432211     11122333 3445666666


Q ss_pred             HHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCC
Q 017167           95 GITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPA  174 (376)
Q Consensus        95 ~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~  174 (376)
                       ...++.++++|++++++++++++.++.|+++++++++++|||+++      .++++++++++|+.++..  ++      
T Consensus        80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~------~~~l~~~~~~~Gv~li~~--~~------  144 (256)
T TIGR00688        80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISR------FQFIAVIIATLGVISNIV--LK------  144 (256)
T ss_pred             -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCH------HHHHHHHHHHHHHHHHHH--Hc------
Confidence             478999999999999999999999999999999999999999999      599999999999998852  11      


Q ss_pred             CCCCCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHh
Q 017167          175 PPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIF  254 (376)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (376)
                                            .+. .    .++++++++|+.|.+..|+..++  +........ ........+... .
T Consensus       145 ----------------------~~~-~----~~~l~aa~~~a~~~i~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~-~  193 (256)
T TIGR00688       145 ----------------------GSL-P----WEALVLAFSFTAYGLIRKALKNT--DLAGFCLET-LSLMPVAIYYLL-Q  193 (256)
T ss_pred             ----------------------CCc-h----HHHHHHHHHHHHHHHHHhhcCCC--CcchHHHHH-HHHHHHHHHHHH-H
Confidence                                  111 1    35789999999999998886543  222221111 111111111111 1


Q ss_pred             hcCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHH
Q 017167          255 ERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFA  317 (376)
Q Consensus       255 ~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~  317 (376)
                      .+........+..+|..+++.|++ +.++|.+|++++|+.++++++++.+++|+++.+++.++
T Consensus       194 ~~~~~~~~~~~~~~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       194 TDFATVQQTNPFPIWLLLVLAGLI-TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             hccCcccccCchhHHHHHHHHHHH-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            111111111122478888888886 89999999999999999999999999999999999864

This uncharacterized protein is predicted to have many membrane-spanning domains.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.91  E-value=6.5e-23  Score=192.39  Aligned_cols=281  Identities=22%  Similarity=0.302  Sum_probs=216.9

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHH
Q 017167           19 KLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITA   98 (376)
Q Consensus        19 ~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   98 (376)
                      ...+..+.++....|+......|...+...++....+.|...+.++..+.... ++....+ ..+.+++....+.+....
T Consensus         5 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~   82 (292)
T COG0697           5 LLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLL-EPRGLRP-ALRPWLLLLLLALLGLAL   82 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHh-hcccccc-cccchHHHHHHHHHHHHH
Confidence            45577888888999999999999988742566666677999988873333322 1111111 112245677777777789


Q ss_pred             HHHHHHHhcccCCccceeecccchhHHHHHHHH-HHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCCC
Q 017167           99 NQGFYLLGLENTSPTFASAIQNSVPAITFLMAA-IFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPL  177 (376)
Q Consensus        99 ~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~-l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~~  177 (376)
                      ++.+++.++++++++.++++.++.|+++.++++ +++|||+++      .++.++.+.+.|+.++.. .+..        
T Consensus        83 ~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~------~~~~~~~~~~~Gv~lv~~-~~~~--------  147 (292)
T COG0697          83 PFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSL------LQILGILLALAGVLLILL-GGGG--------  147 (292)
T ss_pred             HHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcH------HHHHHHHHHHHhHHheec-CCCc--------
Confidence            999999999999999999999999999999997 777999999      599999999999999972 1111        


Q ss_pred             CCCCCCCcchhhhccccCCCCCc-hhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHH-HHHHHHHHHHHHHHHHhh
Q 017167          178 NQIQPDSLTSTIFLSLGDAKGKN-WTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTA-YTCFFGLIQFMIIAAIFE  255 (376)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~-~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  255 (376)
                                          ... ...|+.+.++++++|+.+.+..|+.. +. ++..... +..........+...  .
T Consensus       148 --------------------~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~--~  203 (292)
T COG0697         148 --------------------GGILSLLGLLLALAAALLWALYTALVKRLS-RL-GPVTLALLLQLLLALLLLLLFFL--S  203 (292)
T ss_pred             --------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CC-ChHHHHHHHHHHHHHHHHHHHHh--c
Confidence                                111 56899999999999999999999877 44 3444444 333311111112111  1


Q ss_pred             cCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhh
Q 017167          256 RNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPAR  335 (376)
Q Consensus       256 ~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~  335 (376)
                      ...   ...+...+..+.+.|++++++++.+|++++++.++.+.+...+++|+++.+++++++||+++..+++|+.+++.
T Consensus       204 ~~~---~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~  280 (292)
T COG0697         204 GFG---APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVL  280 (292)
T ss_pred             ccc---ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHH
Confidence            111   12245678889999999888999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhcccc
Q 017167          336 SILLPNRW  343 (376)
Q Consensus       336 gi~l~~~~  343 (376)
                      |+.+.+++
T Consensus       281 g~~l~~~~  288 (292)
T COG0697         281 GVLLASLR  288 (292)
T ss_pred             HHHHHhcc
Confidence            99999876

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.91  E-value=1.9e-22  Score=191.24  Aligned_cols=296  Identities=17%  Similarity=0.191  Sum_probs=231.3

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHHHHHHHHHhhhh-ccCCCCCHHHHHHHHHHHHHHH
Q 017167           19 KLQLHLAMVALQFGYAGFHVVSRAALNMGIS-KLVFPVYRNIIAFLLLLPFAYFLEK-KERPAMTLNFALQFILLALVGI   96 (376)
Q Consensus        19 ~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~-~~~~~~~r~~~a~l~l~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~   96 (376)
                      -++..++.=..+++-......+..+.++|.+ |..-.++.++.-.++..+...++++ +++.+..+++|+++++.+++. 
T Consensus        11 ~~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~D-   89 (334)
T PF06027_consen   11 FWIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLD-   89 (334)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHH-
Confidence            4555666666677888888888888876665 6666677777766666666555433 233344567888899999997 


Q ss_pred             HHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCC
Q 017167           97 TANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPP  176 (376)
Q Consensus        97 ~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~  176 (376)
                      ..++.+.+.|++|++.+.++++..+.-+++.+++++++|||.++      .+++|+++++.|+.++...+....++    
T Consensus        90 v~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~------~~~~gv~i~i~Gv~lv~~sD~~~~~~----  159 (334)
T PF06027_consen   90 VEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSW------FHILGVLICIAGVVLVVVSDVLSGSD----  159 (334)
T ss_pred             HHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhH------HHHHHHHHHHhhhhheeeeccccccc----
Confidence            58999999999999999999999999999999999999999999      69999999999999987432221110    


Q ss_pred             CCCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhc
Q 017167          177 LNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFER  256 (376)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (376)
                                        ++..++..+||+++++++++||+++++.++..++. +......+.-+++.++..+...+.|.
T Consensus       160 ------------------~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~-~~~~~lg~~Glfg~ii~~iq~~ile~  220 (334)
T PF06027_consen  160 ------------------SSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKA-PRVEFLGMLGLFGFIISGIQLAILER  220 (334)
T ss_pred             ------------------CCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccC-CHHHHHHHHHHHHHHHHHHHHHheeh
Confidence                              00345668999999999999999999999999988 47788888888888888887776654


Q ss_pred             C-cccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhh
Q 017167          257 N-LDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPAR  335 (376)
Q Consensus       257 ~-~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~  335 (376)
                      . ....+  +.......+....++...-|.+....++..+|+..++-..+..+++++++++++|+++++..++|.++|+.
T Consensus       221 ~~i~~~~--w~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIii  298 (334)
T PF06027_consen  221 SGIESIH--WTSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIII  298 (334)
T ss_pred             hhhhccC--CChhhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHH
Confidence            2 22211  22233333333344567778888899999999999999999999999999999999999999999999999


Q ss_pred             hhhhccccccc
Q 017167          336 SILLPNRWMST  346 (376)
Q Consensus       336 gi~l~~~~~~~  346 (376)
                      |.++.+..+++
T Consensus       299 G~vvy~~~~~~  309 (334)
T PF06027_consen  299 GFVVYNLAESP  309 (334)
T ss_pred             HhheEEccCCc
Confidence            99998754443

Some of the sequences in this family are annotated as putative membrane proteins.

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.88  E-value=3.5e-21  Score=170.13  Aligned_cols=274  Identities=15%  Similarity=0.141  Sum_probs=227.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017167           22 LHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQG  101 (376)
Q Consensus        22 g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  101 (376)
                      ++..++.++..-=...-+.|.++.. .++...+++|..++.+++.++....    +.+..++++...+..|+.. ..-|.
T Consensus        13 p~~~ll~amvsiq~Gas~Ak~LFP~-vG~~g~t~lRl~~aaLIll~l~RPw----r~r~~~~~~~~~~~yGvsL-g~MNl   86 (292)
T COG5006          13 PILALLVAMVSIQSGASFAKSLFPL-VGAAGVTALRLAIAALILLALFRPW----RRRLSKPQRLALLAYGVSL-GGMNL   86 (292)
T ss_pred             cHHHHHHHHHHHHhhHHHHHHHccc-cChhhHHHHHHHHHHHHHHHHhhHH----HhccChhhhHHHHHHHHHH-HHHHH
Confidence            6788888888888888899999996 9999999999999999999987443    2456788889999999885 67889


Q ss_pred             HHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCCCCCCC
Q 017167          102 FYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQ  181 (376)
Q Consensus       102 ~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~  181 (376)
                      +||.+++++|.+.+..+.++.|+..++++.   |+   .      .+.+-+.+++.|..++.. .++.            
T Consensus        87 ~FY~si~riPlGiAVAiEF~GPL~vA~~~s---Rr---~------~d~vwvaLAvlGi~lL~p-~~~~------------  141 (292)
T COG5006          87 LFYLSIERIPLGIAVAIEFTGPLAVALLSS---RR---L------RDFVWVALAVLGIWLLLP-LGQS------------  141 (292)
T ss_pred             HHHHHHHhccchhhhhhhhccHHHHHHHhc---cc---h------hhHHHHHHHHHHHHhhee-ccCC------------
Confidence            999999999999999999999998887753   11   1      366777888999998862 2222            


Q ss_pred             CCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCcccc
Q 017167          182 PDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAW  261 (376)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (376)
                                     .+.....|..+++.++.||+.|.+..+|.-+.. +........+.++.+..+|+..... ..   
T Consensus       142 ---------------~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~-~g~~g~a~gm~vAaviv~Pig~~~a-g~---  201 (292)
T COG5006         142 ---------------VWSLDPVGVALALGAGACWALYIVLGQRAGRAE-HGTAGVAVGMLVAALIVLPIGAAQA-GP---  201 (292)
T ss_pred             ---------------cCcCCHHHHHHHHHHhHHHHHHHHHcchhcccC-CCchHHHHHHHHHHHHHhhhhhhhc-ch---
Confidence                           234557899999999999999999999987655 5677788889999999999887422 21   


Q ss_pred             cccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhh---
Q 017167          262 IFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSIL---  338 (376)
Q Consensus       262 ~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~---  338 (376)
                      ...+++-...-+..+++++.+.|.+-..++++.+....+.+..+||.++.+.|++++||.+|+.||+|.+.|+.+..   
T Consensus       202 ~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~  281 (292)
T COG5006         202 ALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGST  281 (292)
T ss_pred             hhcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccc
Confidence            12245666777889999999999999999999999999999999999999999999999999999999999987665   


Q ss_pred             hccccccc
Q 017167          339 LPNRWMST  346 (376)
Q Consensus       339 l~~~~~~~  346 (376)
                      +..||+++
T Consensus       282 lt~~~~~~  289 (292)
T COG5006         282 LTARKPAV  289 (292)
T ss_pred             cccCCCCC
Confidence            44455443

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.88  E-value=2.7e-23  Score=184.55  Aligned_cols=290  Identities=17%  Similarity=0.119  Sum_probs=221.9

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHH
Q 017167           19 KLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITA   98 (376)
Q Consensus        19 ~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   98 (376)
                      ..+|..+.-++ ..+....+.++..++  .+|.+....|++.-.++..+..++++.....+  .....++++.|..| ..
T Consensus        36 p~~gl~l~~vs-~ff~~~~vv~t~~~e--~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp--~g~R~~LiLRg~mG-~t  109 (346)
T KOG4510|consen   36 PNLGLLLLTVS-YFFNSCMVVSTKVLE--NDPMELASFRLLVRMLITYPCLIYYMQPVIGP--EGKRKWLILRGFMG-FT  109 (346)
T ss_pred             CccCceehhhH-HHHhhHHHhhhhhhc--cChhHhhhhhhhhehhhhheEEEEEeeeeecC--CCcEEEEEeehhhh-hh
Confidence            35577777777 555555555555554  78999999998877777776665543222111  12226788899998 46


Q ss_pred             HHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcc-cCCCCCC
Q 017167           99 NQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTI-YSPAPPL  177 (376)
Q Consensus        99 ~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~-~~~~~~~  177 (376)
                      +....|||++|.+.+++++|.++.|+++.+++|+++|||.+.      .+.++..+.+.||+++.  ++++. +++.+++
T Consensus       110 gvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~------~eaL~s~itl~GVVLIv--RPpFlFG~~t~g~  181 (346)
T KOG4510|consen  110 GVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTK------FEALGSLITLLGVVLIV--RPPFLFGDTTEGE  181 (346)
T ss_pred             HHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcH------HHHHHHHHhhheEEEEe--cCCcccCCCcccc
Confidence            888899999999999999999999999999999999999999      79999999999999996  45442 2222222


Q ss_pred             CCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcC
Q 017167          178 NQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERN  257 (376)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (376)
                      ++++                ...+..|.+.++.+.+..+--.++.|+.-|+. |......|..+++.+..+......+  
T Consensus       182 ~~s~----------------~~~~~~gt~aai~s~lf~asvyIilR~iGk~~-h~~msvsyf~~i~lV~s~I~~~~ig--  242 (346)
T KOG4510|consen  182 DSSQ----------------VEYDIPGTVAAISSVLFGASVYIILRYIGKNA-HAIMSVSYFSLITLVVSLIGCASIG--  242 (346)
T ss_pred             cccc----------------ccccCCchHHHHHhHhhhhhHHHHHHHhhccc-cEEEEehHHHHHHHHHHHHHHhhcc--
Confidence            2111                12345677888888888777777788876776 5666666777777776655444222  


Q ss_pred             cccccc-cCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhh
Q 017167          258 LDAWIF-HNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARS  336 (376)
Q Consensus       258 ~~~~~~-~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~g  336 (376)
                        .+.. ....+|+..+.+|++ +.++|++...++|+..+..++++.+.+.+++.+++++++||.|+++.|+|+++|+.+
T Consensus       243 --~~~lP~cgkdr~l~~~lGvf-gfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS  319 (346)
T KOG4510|consen  243 --AVQLPHCGKDRWLFVNLGVF-GFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSS  319 (346)
T ss_pred             --ceecCccccceEEEEEehhh-hhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehh
Confidence              2222 246788888999997 899999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhccccc
Q 017167          337 ILLPNRWM  344 (376)
Q Consensus       337 i~l~~~~~  344 (376)
                      .+++.+++
T Consensus       320 ~v~~a~~k  327 (346)
T KOG4510|consen  320 TVWVALKK  327 (346)
T ss_pred             HHHHHHHH
Confidence            99875443

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.86  E-value=4.9e-20  Score=167.12  Aligned_cols=276  Identities=15%  Similarity=0.121  Sum_probs=222.0

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhc-cCC--CCCHHHHHHHHHHHHH
Q 017167           18 EKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKK-ERP--AMTLNFALQFILLALV   94 (376)
Q Consensus        18 ~~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~-~~~--~~~~~~~~~~~~~g~~   94 (376)
                      +..+|+++.+.+.++||..+.+.|.+.  ..++.++...|.+.++.++..+....++. +..  ..+++.+..+.+.++.
T Consensus         4 ~~~~Gil~~l~Ay~lwG~lp~y~kll~--~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l   81 (293)
T COG2962           4 DSRKGILLALLAYLLWGLLPLYFKLLE--PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL   81 (293)
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH
Confidence            356799999999999999999999864  39999999999999999988877665432 111  2345666777777777


Q ss_pred             HHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCC
Q 017167           95 GITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPA  174 (376)
Q Consensus        95 ~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~  174 (376)
                       ++.++..|.+|..+..+-++++=.+.+|++.++++.+++|||+++      .|++++.++.+||.......|+      
T Consensus        82 -i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~------~Q~iAV~lA~~GV~~~~~~~g~------  148 (293)
T COG2962          82 -IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSR------LQWIAVGLAAAGVLIQTWLLGS------  148 (293)
T ss_pred             -HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccH------HHHHHHHHHHHHHHHHHHHcCC------
Confidence             579999999999999999999999999999999999999999999      7999999999999998753332      


Q ss_pred             CCCCCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHh
Q 017167          175 PPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIF  254 (376)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (376)
                                              ..     ..++.-+++|+.|....|+ . +. ++.+.....+..-....+......
T Consensus       149 ------------------------lp-----wval~la~sf~~Ygl~RK~-~-~v-~a~~g~~lE~l~l~p~al~yl~~l  196 (293)
T COG2962         149 ------------------------LP-----WVALALALSFGLYGLLRKK-L-KV-DALTGLTLETLLLLPVALIYLLFL  196 (293)
T ss_pred             ------------------------Cc-----HHHHHHHHHHHHHHHHHHh-c-CC-chHHhHHHHHHHHhHHHHHHHHHH
Confidence                                    11     2346678899999997444 2 23 455555555555555555555544


Q ss_pred             hcCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhh
Q 017167          255 ERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPA  334 (376)
Q Consensus       255 ~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~  334 (376)
                      +...+.....+...+..+...|.+ ++++..++..+.|+++-+..+.++|.+|..-.+++++++||+++..+++..++|.
T Consensus       197 ~~~~~~~~~~~~~~~~LLv~aG~v-TavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW  275 (293)
T COG2962         197 ADSGQFLQQNANSLWLLLVLAGLV-TAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIW  275 (293)
T ss_pred             hcCchhhhcCCchHHHHHHHhhHH-HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHH
Confidence            433321121345677788888887 9999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhcc
Q 017167          335 RSILLPN  341 (376)
Q Consensus       335 ~gi~l~~  341 (376)
                      .|+++..
T Consensus       276 ~aL~l~~  282 (293)
T COG2962         276 LALALFS  282 (293)
T ss_pred             HHHHHHH
Confidence            9999864

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.86  E-value=2.9e-20  Score=175.40  Aligned_cols=272  Identities=12%  Similarity=0.025  Sum_probs=205.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017167           22 LHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQG  101 (376)
Q Consensus        22 g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  101 (376)
                      ++++.++++++||...+..|...  +.++.++.  |..++.+++..+....++++  +..++.+..-++.|.+ ...++.
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~--g~~~~~~~--~~~~g~l~~~~~~~~~~~~~--~~~~~~~~~g~l~G~~-w~ig~~   74 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG--GGPYSQTL--GTTFGALILSIAIAIFVLPE--FWALSIFLVGLLSGAF-WALGQI   74 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC--CCHHHHHH--HHHHHHHHHHHHHHHHhCCc--ccccHHHHHHHHHHHH-HHhhhh
Confidence            46789999999999999999865  58887775  78888777766655533211  1224444444555555 578999


Q ss_pred             HHHHhcccCCccceeeccc-chhHHHHHHHHHHhhccccccccCccce----eehHhHHHHhHhhhhhccCCcccCCCCC
Q 017167          102 FYLLGLENTSPTFASAIQN-SVPAITFLMAAIFRIEKVRLDRKDGIAK----VVGTLFCVAGATVITLYKGPTIYSPAPP  176 (376)
Q Consensus       102 ~~~~al~~~~~~~a~ii~~-~~Pl~~~lla~l~l~e~~~~~~~~~~~~----~igi~l~~~Gv~li~~~~~~~~~~~~~~  176 (376)
                      +++.++++++.+.+..+.+ +.+++..+.+.+++|||.+.+      +    ++|++++++|+.++...+++..      
T Consensus        75 ~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~------~~~~~~~g~~l~l~G~~l~~~~~~~~~------  142 (290)
T TIGR00776        75 NQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSI------QTLLGLLALILIIIGVYLTSRSKDKSA------  142 (290)
T ss_pred             hHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchH------HHHHHHHHHHHHHHhHheEEecccccc------
Confidence            9999999999999999988 888999999999999999884      7    9999999999988852211100      


Q ss_pred             CCCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHH----HHHHHHHHHHH
Q 017167          177 LNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCF----FGLIQFMIIAA  252 (376)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~  252 (376)
                           +           + +...+..+|++++++++++|+.|.+..|+.  ++ ++....+.+..    .+.+...+. .
T Consensus       143 -----~-----------~-~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~--~~-~~~~~~~~~~~g~~~~~~~~~~~~-~  201 (290)
T TIGR00776       143 -----G-----------I-KSEFNFKKGILLLLMSTIGYLVYVVVAKAF--GV-DGLSVLLPQAIGMVIGGIIFNLGH-I  201 (290)
T ss_pred             -----c-----------c-ccccchhhHHHHHHHHHHHHHHHHHHHHHc--CC-CcceehhHHHHHHHHHHHHHHHHH-h
Confidence                 0           0 000233679999999999999999999875  35 57777444444    333333322 1


Q ss_pred             HhhcCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHh-cCCceeeeecchhHHHHHHHHHHHHhCCccccccc----
Q 017167          253 IFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCID-RGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGY----  327 (376)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~-~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~----  327 (376)
                        . . .++   +.+..+..+..|++ ..+++.+|..+.+ +.++++.+.+...+|+.+.+.+++++||+.++.|+    
T Consensus       202 --~-~-~~~---~~~~~~~~~~~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~  273 (290)
T TIGR00776       202 --L-A-KPL---KKYAILLNILPGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAIS  273 (290)
T ss_pred             --c-c-cch---HHHHHHHHHHHHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhH
Confidence              1 0 111   23344444558888 8999999999999 99999999999999999999999999999999999    


Q ss_pred             cchhhhhhhhhhcc
Q 017167          328 VPATSPARSILLPN  341 (376)
Q Consensus       328 iG~~lI~~gi~l~~  341 (376)
                      +|.++|+.|+.+..
T Consensus       274 iG~~lIi~~~~l~~  287 (290)
T TIGR00776       274 VGIILIIIAANILG  287 (290)
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999998864

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.76  E-value=7.4e-18  Score=156.89  Aligned_cols=233  Identities=12%  Similarity=0.116  Sum_probs=186.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhc
Q 017167           86 LQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLY  165 (376)
Q Consensus        86 ~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~  165 (376)
                      ...+....+. ++.+.++..|+++++++..+++.++..+|+..++.++.+||+++      .+++++.+++.|++++..+
T Consensus       160 k~sl~fc~lW-F~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~------sKllav~~si~GViiVt~~  232 (416)
T KOG2765|consen  160 KLSLFFCPLW-FLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTL------SKLLAVFVSIAGVIIVTMG  232 (416)
T ss_pred             HHHHHHHHHH-HHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhH------HHHHHHHHhhccEEEEEec
Confidence            3345555665 57889999999999999999999999999999999999999999      6999999999999999854


Q ss_pred             cCCcccCCCCCCCCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHH--
Q 017167          166 KGPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFG--  243 (376)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~--  243 (376)
                      ++....                     +  .......+|+++++++++.||.|.++.||...++.+.+.+..+.-++|  
T Consensus       233 ~s~~~~---------------------~--~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLf  289 (416)
T KOG2765|consen  233 DSKQNS---------------------D--LPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLF  289 (416)
T ss_pred             cccccc---------------------c--CCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHH
Confidence            322110                     0  034556899999999999999999999987766522444444433333  


Q ss_pred             -HHHHHHHHHHhhc-CcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCc
Q 017167          244 -LIQFMIIAAIFER-NLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEE  321 (376)
Q Consensus       244 -~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~  321 (376)
                       .+++.|...+.+. ..+.++.++..+...++..+.+++.++-++|.+|.-..+|..+++-+.++...+++.+.++-+..
T Consensus       290 nllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~  369 (416)
T KOG2765|consen  290 NLLLLWPPLIILDFFGEERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKH  369 (416)
T ss_pred             HHHHHhHHHHHHHHhccCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCC
Confidence             3333433333222 34455666777888889999999999999999999999999999999999999999999988999


Q ss_pred             cccccccchhhhhhhhhhccccccccc
Q 017167          322 FYLGGYVPATSPARSILLPNRWMSTCM  348 (376)
Q Consensus       322 ~~~~~~iG~~lI~~gi~l~~~~~~~~~  348 (376)
                      +++.+++|...|++|-+.++...+...
T Consensus       370 ~S~~~iiGsi~Ifv~Fv~vn~~~~~~~  396 (416)
T KOG2765|consen  370 PSALYIIGSIPIFVGFVIVNISSENSK  396 (416)
T ss_pred             CCHHHHHHHHHHHHHHhheeccccccc
Confidence            999999999999999999986544433

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.75  E-value=1.1e-16  Score=152.06  Aligned_cols=276  Identities=13%  Similarity=0.124  Sum_probs=212.9

Q ss_pred             HHHHHHHhc-CCC--chHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccc
Q 017167           38 VVSRAALNM-GIS--KLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFYLLGLENTSPTF  114 (376)
Q Consensus        38 ~~~k~~~~~-~~~--~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~  114 (376)
                      +.-+..... +..  |..+++..+....+.........+   .++.++..++.++..+++. .++..+-+.|+++++...
T Consensus        17 ~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~al~~i~~p~   92 (303)
T PF08449_consen   17 ILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK---FPKSRKIPLKKYAILSFLF-FLASVLSNAALKYISYPT   92 (303)
T ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc---ccCCCcChHHHHHHHHHHH-HHHHHHHHHHHHhCChHH
Confidence            444444432 344  788999999998887776665433   1223445556677777775 688899999999999999


Q ss_pred             eeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCCCCCCCCCCcchhhhcccc
Q 017167          115 ASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLG  194 (376)
Q Consensus       115 a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (376)
                      -.++.++.|+++.+++.+++|+|.++      .++.++++..+|+.+....+....+.        ++.           
T Consensus        93 ~~~~ks~~~i~vmi~~~l~~~k~y~~------~~~~~v~li~~Gv~~~~~~~~~~~~~--------~~~-----------  147 (303)
T PF08449_consen   93 QIVFKSSKPIPVMILGVLILGKRYSR------RQYLSVLLITIGVAIFTLSDSSSSSS--------SNS-----------  147 (303)
T ss_pred             HHHHhhhHHHHHHHHHHHhcCccccH------HHHHHHHHHHhhHheeeecccccccc--------ccc-----------
Confidence            99999999999999999999999999      59999999999999997533221110        000           


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCC-CcchhHHHHHHHHHHHHHHHHHH--hhcCccc--ccccCCchh
Q 017167          195 DAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYP-ARLSVTAYTCFFGLIQFMIIAAI--FERNLDA--WIFHNGGEV  269 (376)
Q Consensus       195 ~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~  269 (376)
                        .......|+++.+++.++.+...++++|..++++ ++.+..++...++.+...+....  .++..+.  +...++..+
T Consensus       148 --~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~  225 (303)
T PF08449_consen  148 --SSFSSALGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVL  225 (303)
T ss_pred             --ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHH
Confidence              1122344999999999999999999999998776 66788899999998888777765  2222111  112234455


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhcccccc
Q 017167          270 FSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPNRWMS  345 (376)
Q Consensus       270 ~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~~~~~  345 (376)
                      ..++...+. ..+++.+.+...++.++...+++..++-+++++++++++|+++++.+|+|.++++.|..+....++
T Consensus       226 ~~l~~~s~~-~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~  300 (303)
T PF08449_consen  226 LYLLLFSLT-GALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKK  300 (303)
T ss_pred             HHHHHHHHH-HHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhc
Confidence            555555554 788888899999999999999999999999999999999999999999999999999999865443

; GO: 0055085 transmembrane transport

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.65  E-value=5.1e-16  Score=145.75  Aligned_cols=286  Identities=13%  Similarity=0.066  Sum_probs=222.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhc--CCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017167           24 LAMVALQFGYAGFHVVSRAALNM--GISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQG  101 (376)
Q Consensus        24 ~~~lla~~~~g~~~~~~k~~~~~--~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  101 (376)
                      .+....-++-.......|+.++.  .--|..++..+...+.+.+......+..+..+..++..+...+.+|++. +++..
T Consensus        20 ~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~-~~~~v   98 (316)
T KOG1441|consen   20 IAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVF-CISHV   98 (316)
T ss_pred             HHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHH-HHHHH
Confidence            33444444445566788888883  3347888888777777777666655433333333456788889999996 78999


Q ss_pred             HHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCCCCCCC
Q 017167          102 FYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQ  181 (376)
Q Consensus       102 ~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~  181 (376)
                      +-..|+.+.+++..+.+..+.|++++++++++.+|+.++      ..+..++..+.|+.+.+.  +              
T Consensus        99 ~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~------~~~lsL~piv~GV~ias~--~--------------  156 (316)
T KOG1441|consen   99 LGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSS------MTYLSLLPIVFGVAIASV--T--------------  156 (316)
T ss_pred             hcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcc------eEEEEEEEeeeeEEEeee--c--------------
Confidence            999999999999999999999999999999999999999      588999999999998873  1              


Q ss_pred             CCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhh--hCC-CcchhHHHHHHHHHHHHH-HHHHHhhcC
Q 017167          182 PDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLK--KYP-ARLSVTAYTCFFGLIQFM-IIAAIFERN  257 (376)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~  257 (376)
                                     +.+-+..|...++.+.+..+..+++.++..+  +++ ++.+...++.-.+.+.++ |+....+++
T Consensus       157 ---------------e~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~  221 (316)
T KOG1441|consen  157 ---------------ELSFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGN  221 (316)
T ss_pred             ---------------cccccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhccc
Confidence                           2334578999999999999999999999984  333 789999999999999888 877765543


Q ss_pred             cc---cccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhh
Q 017167          258 LD---AWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPA  334 (376)
Q Consensus       258 ~~---~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~  334 (376)
                      ..   .....+.. ...+++..+ +...-....+..+.+.+|..-++.+.+.-++.++.++++|+|+.++.+..|.++.+
T Consensus       222 ~~~~~~~~~~~~~-~~~~~~~sv-~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai  299 (316)
T KOG1441|consen  222 KFVGFLTAPWFVT-FLILLLNSV-LAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAI  299 (316)
T ss_pred             ceeeeeccccchh-hHHHHHHHH-HHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHH
Confidence            22   11111112 333344443 35555666789999999999999999999999999999999999999999999999


Q ss_pred             hhhhhccccccccch
Q 017167          335 RSILLPNRWMSTCML  349 (376)
Q Consensus       335 ~gi~l~~~~~~~~~~  349 (376)
                      .|++++++-+.+.|+
T Consensus       300 ~Gv~~Y~~~k~~~~~  314 (316)
T KOG1441|consen  300 LGVFLYSRAKLKEKK  314 (316)
T ss_pred             HHHHHHHHHhhhhhc
Confidence            999999876555443

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.59  E-value=1e-14  Score=116.35  Aligned_cols=134  Identities=16%  Similarity=0.222  Sum_probs=120.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCC-CCCHHHHHHHHHHHHHHHHHHH
Q 017167           22 LHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERP-AMTLNFALQFILLALVGITANQ  100 (376)
Q Consensus        22 g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~  100 (376)
                      ..+++++++++||...++.|...| ++||..-++.|.+...+++..++...++.+.. ..++|.|....+.|+.+ .+++
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~-~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~-glsw   81 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLE-GVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAG-GLSW   81 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcc-ccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHH-HHHH
Confidence            568999999999999999999999 69999999999999999988888776543322 35778888778888665 8999


Q ss_pred             HHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhh
Q 017167          101 GFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT  163 (376)
Q Consensus       101 ~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~  163 (376)
                      .+||.|++..+++....+..+.|+++++++++++|||++.      .+++|+++.++|+++++
T Consensus        82 l~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~------~~~iG~~LI~~Gailvs  138 (140)
T COG2510          82 LLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSL------PTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCH------HHHHHHHHHHhCeeeEe
Confidence            9999999999999999999999999999999999999999      59999999999999875

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.56  E-value=7.1e-14  Score=111.52  Aligned_cols=137  Identities=14%  Similarity=0.131  Sum_probs=120.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCcccccccCCchhHHHHHHHHHHHHHH
Q 017167          204 GCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIA  283 (376)
Q Consensus       204 G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~  283 (376)
                      ..++++++++++++..++.|-.+++. ||...++.+.......+..+....+ +.+.....+++.|..+...|+ +++++
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~v-dp~~At~IRtiVi~~~l~~v~~~~g-~~~~~~~~~~k~~lflilSGl-a~gls   80 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEGV-DPDFATTIRTIVILIFLLIVLLVTG-NWQAGGEIGPKSWLFLILSGL-AGGLS   80 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccc-CccHHHHHHHHHHHHHHHHHHHhcC-ceecccccCcceehhhhHHHH-HHHHH
Confidence            45789999999999999999999888 7889999999988888777776543 333332347788999999996 59999


Q ss_pred             HHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhcccc
Q 017167          284 FAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPNRW  343 (376)
Q Consensus       284 ~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~~~  343 (376)
                      ..+|++++|..+++++..+..++|+++++++++++||+++..+++|..+|..|++++.++
T Consensus        81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~~  140 (140)
T COG2510          81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSLR  140 (140)
T ss_pred             HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEecC
Confidence            999999999999999999999999999999999999999999999999999999988654

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.50  E-value=6.5e-13  Score=121.88  Aligned_cols=231  Identities=12%  Similarity=0.090  Sum_probs=169.5

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHh
Q 017167           81 TLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGAT  160 (376)
Q Consensus        81 ~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~  160 (376)
                      ++++.+++.+=+++- .+.+.+.+.++++++++.-+++..+..++|++++++++|+|++.      .+|+++.+.++|+.
T Consensus        13 ~~~~~~~~~vPA~lY-~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~------~qW~aL~lL~~Gv~   85 (244)
T PF04142_consen   13 SPKDTLKLAVPALLY-AIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSR------RQWLALFLLVAGVV   85 (244)
T ss_pred             hHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccch------hhHHHHHHHHHHHh
Confidence            456677777777774 78999999999999999999999999999999999999999999      59999999999999


Q ss_pred             hhhhccCCcccCCCCCCCCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcc-hhHHHH
Q 017167          161 VITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARL-SVTAYT  239 (376)
Q Consensus       161 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~-~~~~~~  239 (376)
                      ++-...... .+.++.+..++..             ...+...|+++.+.++++.++..++.+|.+|+.+.+. ..+...
T Consensus        86 lv~~~~~~~-~~~~~~~~~~~~~-------------~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL  151 (244)
T PF04142_consen   86 LVQLSSSQS-SDNSSSSSVHHDA-------------SNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQL  151 (244)
T ss_pred             eeecCCccc-ccccccccccccc-------------ccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHH
Confidence            986322111 1110011000000             2345678999999999999999999999998875333 334444


Q ss_pred             HHHHHHHHHHHHHHhhcCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhC
Q 017167          240 CFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALG  319 (376)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~  319 (376)
                      ...|.+..++...+.+.. ...+....+.+-...+.-++..+++-++....+|+.+...=+.....+.+++.+++++++|
T Consensus       152 ~~~gi~~~~~~~~~~~~~-~~~~~g~f~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~  230 (244)
T PF04142_consen  152 YLFGILFNLLALLLSDGS-AISESGFFHGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFG  230 (244)
T ss_pred             HHHHHHHHHHHHhccccc-ccccCCchhhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            555555555544432221 1111111122333344455557777788889999999999999999999999999999999


Q ss_pred             Cccccccccchhhh
Q 017167          320 EEFYLGGYVPATSP  333 (376)
Q Consensus       320 e~~~~~~~iG~~lI  333 (376)
                      .+++....+|..++
T Consensus       231 ~~~s~~f~lg~~~V  244 (244)
T PF04142_consen  231 FPPSLSFLLGAALV  244 (244)
T ss_pred             CCCchHHhhheecC
Confidence            99999999998764

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.49  E-value=6.3e-13  Score=116.72  Aligned_cols=255  Identities=8%  Similarity=0.048  Sum_probs=195.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccceeecccchhHHHHHHH
Q 017167           51 LVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMA  130 (376)
Q Consensus        51 ~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla  130 (376)
                      ..++++++....++.=.+..++++ .  +.++..-+.+...++- ..+..+.-..|++++|-.+..+-.++.|+-+.+++
T Consensus        54 laLVf~qC~~N~vfAkvl~~ir~~-~--~~D~t~~~~YaAcs~s-YLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilG  129 (337)
T KOG1580|consen   54 LALVFFQCTANTVFAKVLFLIRKK-T--EIDNTPTKMYAACSAS-YLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILG  129 (337)
T ss_pred             HHHHHHHHHHHHHHHHhheeeccc-c--cccCCcchHHHHHHHH-HHHHHHhccchhcccCCcHHHhcccCCCcceeeee
Confidence            345566666555544333323221 1  1222222334444433 35677777899999999999999999999999999


Q ss_pred             HHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCCCCCCCCCCcchhhhccccCCCCCchhhHHHHHHH
Q 017167          131 AIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIG  210 (376)
Q Consensus       131 ~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~  210 (376)
                      .++.+++-+|      ++...+++.++|+.+.++..+.-.+.                        .+.....|.++.++
T Consensus       130 Vl~~~KsY~w------~kY~cVL~IV~GValFmYK~~Kv~g~------------------------e~~t~g~GElLL~l  179 (337)
T KOG1580|consen  130 VLFAHKSYHW------RKYCCVLMIVVGVALFMYKENKVGGA------------------------EDKTFGFGELLLIL  179 (337)
T ss_pred             hhhhcccccH------HHHHHHHHHHHHHHHhhccccccCCC------------------------cccccchHHHHHHH
Confidence            9999888888      59999999999999997432322111                        44667899999999


Q ss_pred             HHHHHHHHHHHHHHhhhhCC-CcchhHHHHHHHHHHHHHHHHHHhhcCcc--cccccCCchhHHHHHHHHHHHHHHHHHH
Q 017167          211 HCLSWSGWLVMQAPVLKKYP-ARLSVTAYTCFFGLIQFMIIAAIFERNLD--AWIFHNGGEVFSILYAGVVASGIAFAVQ  287 (376)
Q Consensus       211 a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~g~~~~~~~~~l~  287 (376)
                      +--.-++....+.+..+.+. ....++++.++.+.+.+....+++++-++  -+....+..|+-+...++. +++++.+.
T Consensus       180 SL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai~-s~LGQ~fI  258 (337)
T KOG1580|consen  180 SLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAIA-SCLGQWFI  258 (337)
T ss_pred             HHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHHH-HHhhhHHH
Confidence            99999999999988766553 56688899999999888766665543222  2234467788888888885 99999999


Q ss_pred             HHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhc
Q 017167          288 IWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLP  340 (376)
Q Consensus       288 ~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~  340 (376)
                      +.-+.+.+|..-|++....-.++++.++++++++++.+||+|..++..+...=
T Consensus       259 F~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D  311 (337)
T KOG1580|consen  259 FKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTAD  311 (337)
T ss_pred             HHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhH
Confidence            99999999999999999999999999999999999999999999999988763

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.45  E-value=1.2e-13  Score=113.02  Aligned_cols=125  Identities=24%  Similarity=0.386  Sum_probs=111.3

Q ss_pred             HHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q 017167           31 FGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFYLLGLENT  110 (376)
Q Consensus        31 ~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~  110 (376)
                      ++||...++.|...++ .||....++|+..+.+ +.++....+++.....+++++......|+++..+++.+++++++++
T Consensus         1 ~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~   78 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYI   78 (126)
T ss_pred             ceeeeHHHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhc
Confidence            4799999999999985 9999999999999998 6666655544444567788888899999987789999999999999


Q ss_pred             CccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhh
Q 017167          111 SPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT  163 (376)
Q Consensus       111 ~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~  163 (376)
                      ++++++.+.+++|+++.+++++++||++++      .+++|+++++.|+.++.
T Consensus        79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~------~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   79 SASIVSILQYLSPVFAAILGWLFLGERPSW------RQIIGIILIIIGVVLIS  125 (126)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCCCCCH------HHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999      59999999999999874

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.45  E-value=2.5e-14  Score=126.90  Aligned_cols=300  Identities=16%  Similarity=0.123  Sum_probs=224.3

Q ss_pred             cccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHH
Q 017167           16 VPEKLQLHLAMVALQFGYAGFHVVSRAALNMGIS-KLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALV   94 (376)
Q Consensus        16 ~~~~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~-~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   94 (376)
                      .++.+.++.+.=+-..+-......+....+.|++ |..-.|..+..-+++-.++..+++ +.    -...|..+++++++
T Consensus        13 tkk~li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~-~~----~~~~~~hYilla~~   87 (336)
T KOG2766|consen   13 TKKTLIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRR-KY----IKAKWRHYILLAFV   87 (336)
T ss_pred             chhhhheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhh-HH----HHHHHHHhhheeEE
Confidence            4555666666555556666666677777766655 666688888888888888887754 21    22345558888888


Q ss_pred             HHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCC
Q 017167           95 GITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPA  174 (376)
Q Consensus        95 ~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~  174 (376)
                      . .-++.+...|.++++.+.+.++-.-.-+...+++|+++|.|-++      .++.|+++|++|++++...+-+..+.  
T Consensus        88 D-VEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrl------mki~gV~iCi~GvvmvV~sDV~agd~--  158 (336)
T KOG2766|consen   88 D-VEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRL------MKISGVVICIVGVVMVVFSDVHAGDR--  158 (336)
T ss_pred             e-ecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhh------heeeeEEeEecceEEEEEeeeccccc--
Confidence            6 46787889999999999999998888888999999999999999      79999999999999997433222111  


Q ss_pred             CCCCCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHh
Q 017167          175 PPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIF  254 (376)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (376)
                                           ++.++..+||++.+.++-+||+.++..+.+.|+. +..+.....-++|++...+... .
T Consensus       159 ---------------------aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn~-d~~elm~~lgLfGaIIsaIQ~i-~  215 (336)
T KOG2766|consen  159 ---------------------AGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKNA-DRVELMGFLGLFGAIISAIQFI-F  215 (336)
T ss_pred             ---------------------cCCCCCccCcEEEEecceeeeeccccHHHHHhcC-cHHHHHHHHHHHHHHHHHHHHh-h
Confidence                                 1456678999999999999999999999999888 5788888888999998888744 3


Q ss_pred             hcCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhh
Q 017167          255 ERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPA  334 (376)
Q Consensus       255 ~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~  334 (376)
                      +.. ......+..+....+. ..++..+-|.+.-.-+|..+++..++-...+-.++++.  ..||-+.+|...+..+.+.
T Consensus       216 ~~~-~~~tl~w~~~i~~yl~-f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~  291 (336)
T KOG2766|consen  216 ERH-HVSTLHWDSAIFLYLR-FALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIA  291 (336)
T ss_pred             hcc-ceeeEeehHHHHHHHH-HHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHH
Confidence            322 1111112122222222 33345555666667788889999999999999999998  6788889999999999999


Q ss_pred             hhhhhccccccccchhhHHHHH
Q 017167          335 RSILLPNRWMSTCMLSFWIQMF  356 (376)
Q Consensus       335 ~gi~l~~~~~~~~~~~~~~~~~  356 (376)
                      .|.+++.-|.+..+-+.-+|+.
T Consensus       292 ~GliiYs~re~~~~e~r~~~v~  313 (336)
T KOG2766|consen  292 TGLIIYSTREKDEEELRKGQVV  313 (336)
T ss_pred             HhhEEeeccccCcHhhccCccc
Confidence            9999997666665555556654

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.44  E-value=5.9e-11  Score=111.18  Aligned_cols=298  Identities=13%  Similarity=0.083  Sum_probs=215.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcC---CCchHHHHHHHHHHHHHHHHHHHhhhhc----cCC------CCCHHHHHH
Q 017167           21 QLHLAMVALQFGYAGFHVVSRAALNMG---ISKLVFPVYRNIIAFLLLLPFAYFLEKK----ERP------AMTLNFALQ   87 (376)
Q Consensus        21 ~g~~~~lla~~~~g~~~~~~k~~~~~~---~~~~~~~~~r~~~a~l~l~~~~~~~~~~----~~~------~~~~~~~~~   87 (376)
                      .-.+.++...+.++...+..|+....+   +.|...++.--++-.++....++...++    ..+      ...+++..+
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk   94 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK   94 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence            566778888999999999999987665   6677777777777776666666554211    111      113334455


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccC
Q 017167           88 FILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKG  167 (376)
Q Consensus        88 ~~~~g~~~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~  167 (376)
                      ..+=+++ .++.+.++|.++.+++++.-++...+--+.|+++..+++++|+++      .+|.+.++..+|+.++-....
T Consensus        95 ~~vPa~i-YalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~------~Qw~Al~lL~~Gv~~vQ~~~~  167 (345)
T KOG2234|consen   95 VSVPALI-YALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSR------LQWMALVLLFAGVALVQLPSL  167 (345)
T ss_pred             HHHHHHH-HHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhH------HHHHHHHHHHHHHHHHhccCC
Confidence            5555556 467888999999999999999999999999999999999999999      599999999999999962222


Q ss_pred             CcccCCCCCCCCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHH-HHHHHHHH
Q 017167          168 PTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAY-TCFFGLIQ  246 (376)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~  246 (376)
                      +..+..  .     ++             ...+...|....+.+++.-+...++-+|.+|+-+.+.-+... ..++|.+.
T Consensus       168 ~~~~a~--~-----~~-------------~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f  227 (345)
T KOG2234|consen  168 SPTGAK--S-----ES-------------SAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILF  227 (345)
T ss_pred             CCCCcc--C-----CC-------------cccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Confidence            111100  0     00             345567899999999999999999999999776544433333 34444444


Q ss_pred             HHHHHHHhhcCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCcccccc
Q 017167          247 FMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGG  326 (376)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~  326 (376)
                      .+......+.....|. .-...|-...+.-++..+.+-++....+|+.+-..=+....+..+++.+.++.++|-.||...
T Consensus       228 ~~l~~~~~d~~~i~~~-gff~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F  306 (345)
T KOG2234|consen  228 NLLTILLQDGEAINEY-GFFYGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYF  306 (345)
T ss_pred             HHHHHhhccccccccC-CccccccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHH
Confidence            4443333322222111 112334445555566677777778888888887777777788999999999999999999999


Q ss_pred             ccchhhhhhhhhhccccccc
Q 017167          327 YVPATSPARSILLPNRWMST  346 (376)
Q Consensus       327 ~iG~~lI~~gi~l~~~~~~~  346 (376)
                      .+|..+++.++.+++..+.+
T Consensus       307 ~lG~~lVi~Si~lY~~~P~~  326 (345)
T KOG2234|consen  307 LLGALLVILSIFLYSLYPAR  326 (345)
T ss_pred             HHHHHHHHHHHHHhhcCCcc
Confidence            99999999999999854443

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.36  E-value=6.9e-13  Score=108.43  Aligned_cols=124  Identities=19%  Similarity=0.315  Sum_probs=107.7

Q ss_pred             HHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHh
Q 017167          213 LSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCID  292 (376)
Q Consensus       213 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~  292 (376)
                      ++||.+.+..|+..++. ++.....+++..+.+ .++...+.+...  ....+..++...++.+.+++.+++.+++++++
T Consensus         1 ~~~a~~~~~~k~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~   76 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKI-SPLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALK   76 (126)
T ss_pred             ceeeeHHHHHHHHhccC-CHHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence            46899999999999887 699999999999998 666665544322  22335677888888898888999999999999


Q ss_pred             cCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhc
Q 017167          293 RGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLP  340 (376)
Q Consensus       293 ~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~  340 (376)
                      +.++++++.+.+++|+++.++++++++|++++.+++|..+++.|+++.
T Consensus        77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~  124 (126)
T PF00892_consen   77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI  124 (126)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999875

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.32  E-value=3e-11  Score=110.31  Aligned_cols=259  Identities=14%  Similarity=0.139  Sum_probs=206.7

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccceeecccchhHHHHH
Q 017167           49 SKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFL  128 (376)
Q Consensus        49 ~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~l  128 (376)
                      ++..+.+.+-+.+.++-...+  ..++.. ...++.|+.+...++.+ .++..+.+.|++|++-..-.+--++--+-+.+
T Consensus        50 ~~~fL~~~q~l~~~~~s~~~l--~~~k~~-~~~~apl~~y~~is~tn-~~s~~~~yeaLKyvSyPtq~LaKscKmIPVml  125 (327)
T KOG1581|consen   50 HSLFLVFCQRLVALLVSYAML--KWWKKE-LSGVAPLYKYSLISFTN-TLSSWCGYEALKYVSYPTQTLAKSCKMIPVML  125 (327)
T ss_pred             ccHHHHHHHHHHHHHHHHHHH--hccccc-CCCCCchhHHhHHHHHh-hcchHHHHHHHHhccchHHHHHHHhhhhHHHH
Confidence            566778888888777664333  222222 33456778888888887 68999999999999988888888888888899


Q ss_pred             HHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCCCCCCCCCCcchhhhccccCCCCCchhhHHHHH
Q 017167          129 MAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYL  208 (376)
Q Consensus       129 la~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~  208 (376)
                      ++.++.|.|.+.      .+.+...+.-.|+.+.++.+.+...                      ..+...+...|+.++
T Consensus       126 mg~Lvy~~ky~~------~eYl~~~LIs~GvsiF~l~~~s~s~----------------------~~~g~~ns~~G~~Ll  177 (327)
T KOG1581|consen  126 MGTLVYGRKYSS------FEYLVAFLISLGVSIFSLFPNSDSS----------------------SKSGRENSPIGILLL  177 (327)
T ss_pred             HHHHHhcCccCc------HHHHHHHHHHhheeeEEEecCCCCc----------------------cccCCCCchHhHHHH
Confidence            999999999999      5999999999999999754322110                      001345678999999


Q ss_pred             HHHHHHHHHHHHHHHHhhhhCC-CcchhHHHHHHHHHHHHHHHHHHhhcC--cccccccCCchhHHHHHHHHHHHHHHHH
Q 017167          209 IGHCLSWSGWLVMQAPVLKKYP-ARLSVTAYTCFFGLIQFMIIAAIFERN--LDAWIFHNGGEVFSILYAGVVASGIAFA  285 (376)
Q Consensus       209 l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ll~~g~~~~~~~~~  285 (376)
                      ...-+.-+..+..+.++.++++ .+..+.++.++++++......+..+..  ..++...+++.++-++....+ ++++|.
T Consensus       178 ~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~~-gavGQ~  256 (327)
T KOG1581|consen  178 FGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYSTC-GAVGQL  256 (327)
T ss_pred             HHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHHh-hhhhhh
Confidence            9999999999999999998776 678889999999888877764432221  112223466778888888885 899999


Q ss_pred             HHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhc
Q 017167          286 VQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLP  340 (376)
Q Consensus       286 l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~  340 (376)
                      +.++-+++.|+...+.++..+-++++.++.+.+|.+.+..|++|..+++.|+.+-
T Consensus       257 FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~  311 (327)
T KOG1581|consen  257 FIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLE  311 (327)
T ss_pred             eehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999884

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.25  E-value=1.9e-09  Score=99.76  Aligned_cols=279  Identities=11%  Similarity=0.094  Sum_probs=209.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHH--HHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHHHH
Q 017167           23 HLAMVALQFGYAGFHVVSRAALNMGISKLVFPV--YRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQ  100 (376)
Q Consensus        23 ~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~--~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  100 (376)
                      ....+.-.+.--...+..|.+...+--|..+..  ++.+.+.+.+...-.. +--+.++++++..++.+...++- ....
T Consensus        14 l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~-~lv~~~~l~~~~~kk~~P~~~lf-~~~i   91 (314)
T KOG1444|consen   14 LLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRL-GLVNFRPLDLRTAKKWFPVSLLF-VGML   91 (314)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHh-ceeecCCcChHHHHHHccHHHHH-HHHH
Confidence            333444444444566788888876433555555  7888777665555433 22345567888888888888874 5677


Q ss_pred             HHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCCCCCC
Q 017167          101 GFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQI  180 (376)
Q Consensus       101 ~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~~~~~  180 (376)
                      .+-..+++++++..-+++-...|+++++...+++|.|.+.      ..+.++....+|......  .             
T Consensus        92 ~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~------~v~~Sv~~m~~~s~~~~~--~-------------  150 (314)
T KOG1444|consen   92 FTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSN------KVWASVFAMIIGSVAAAF--T-------------  150 (314)
T ss_pred             HHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchh------hHHHHHHHHHHHHHhhcc--c-------------
Confidence            7788899999999999999999999999999999977777      588888888877776652  1             


Q ss_pred             CCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCC-CcchhHHHHHHHHHHHHHHHHHHhhcCc-
Q 017167          181 QPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYP-ARLSVTAYTCFFGLIQFMIIAAIFERNL-  258 (376)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  258 (376)
                                      +......|+.+++...++-+.+.+..|+..+..+ +.....++..+.....+.....++++-. 
T Consensus       151 ----------------d~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~  214 (314)
T KOG1444|consen  151 ----------------DLSFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDA  214 (314)
T ss_pred             ----------------cceecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHH
Confidence                            1122345999999999999999999998776544 5678889999999888888777665411 


Q ss_pred             ---ccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhh
Q 017167          259 ---DAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPAR  335 (376)
Q Consensus       259 ---~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~  335 (376)
                         ......+...+..+...++++.++.|. -..+.+..++...+++....-..+.+...++.|++.++...+|..+-+.
T Consensus       215 l~~~~~~~~~~~~~~~~~lScv~gf~isy~-s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~  293 (314)
T KOG1444|consen  215 LSLNFDNWSDSSVLVVMLLSCVMGFGISYT-SFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFF  293 (314)
T ss_pred             HHhhcccccchhHHHHHHHHHHHHHHHHHH-HHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhh
Confidence               110122345577788888886666655 5599999999999999988888888888888899999999999999888


Q ss_pred             hhhhcc
Q 017167          336 SILLPN  341 (376)
Q Consensus       336 gi~l~~  341 (376)
                      |-++++
T Consensus       294 ggv~Y~  299 (314)
T KOG1444|consen  294 GGVLYS  299 (314)
T ss_pred             hhhHHh
Confidence            877764

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.22  E-value=1.1e-10  Score=108.25  Aligned_cols=134  Identities=21%  Similarity=0.258  Sum_probs=114.0

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCch--HHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHH
Q 017167           18 EKLQLHLAMVALQFGYAGFHVVSRAALNMGISKL--VFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVG   95 (376)
Q Consensus        18 ~~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~--~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   95 (376)
                      ...+|.+++++++++|+...+..|...++ .++.  ....+++.++.+++.++.+..++.  ...+.+.+...+..++++
T Consensus       125 ~~~~G~~~~l~a~~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  201 (260)
T TIGR00950       125 INPAGLLLGLGSGISFALGTVLYKRLVKK-EGPELLQFTGWVLLLGALLLLPFAWFLGPN--PQALSLQWGALLYLGLIG  201 (260)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhHHhhc-CCchHHHHHHHHHHHHHHHHHHHHHhcCCC--CCcchHHHHHHHHHHHHH
Confidence            34679999999999999999999998874 6644  455578999998888887654322  234667777888899988


Q ss_pred             HHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHh
Q 017167           96 ITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGAT  160 (376)
Q Consensus        96 ~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~  160 (376)
                      ..+++.++++++++.++++++.+.++.|+++++++++++||+++.      .+++|+.+.+.|++
T Consensus       202 ~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~------~~~~G~~li~~g~~  260 (260)
T TIGR00950       202 TALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSL------PQLIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCH------HHHHHHHHHHHhcC
Confidence            889999999999999999999999999999999999999999999      59999999998863

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.13  E-value=1.3e-08  Score=93.25  Aligned_cols=252  Identities=17%  Similarity=0.190  Sum_probs=183.5

Q ss_pred             chHHHHHHHHHHHHHHHHHHHhhhhcc---CCCCCHHH-HHHHHHHHHHHHHHHHHHHHHhcccCCccceeecccchhHH
Q 017167           50 KLVFPVYRNIIAFLLLLPFAYFLEKKE---RPAMTLNF-ALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAI  125 (376)
Q Consensus        50 ~~~~~~~r~~~a~l~l~~~~~~~~~~~---~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~  125 (376)
                      |...+..+..+-+++.......++++.   +-..+|++ .++....|+.. +..-.+-.+++++++.+.-++..++.++|
T Consensus        45 PLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalat-a~DIGLSN~sl~yVtlSlYTM~KSSsi~F  123 (349)
T KOG1443|consen   45 PLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALAT-ALDIGLSNWSLEYVTLSLYTMTKSSSILF  123 (349)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhh-hcccccccceeeeeeeeeeeeccccHHHH
Confidence            777788888777666555554443322   22455554 45566666665 67778888999999999999999999999


Q ss_pred             HHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCCCCCCCCCCcchhhhccccCCCCCchhhHH
Q 017167          126 TFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGC  205 (376)
Q Consensus       126 ~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~  205 (376)
                      +.+++.++.-||+++      .-..-+.+.-+|+.+.+ +++                              ..-+..|.
T Consensus       124 IllFs~if~lEk~~w------~L~l~v~lI~~Glflft-~Ks------------------------------Tqf~i~Gf  166 (349)
T KOG1443|consen  124 ILLFSLIFKLEKFRW------ALVLIVLLIAVGLFLFT-YKS------------------------------TQFNIEGF  166 (349)
T ss_pred             HHHHHHHHHhHHHHH------HHHHHHHHHhhheeEEE-ecc------------------------------cceeehhH
Confidence            999999999999999      34555555666666665 332                              12346799


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCC----CcchhHHHHHHHHHHHHHHHHHHhhcCccc-----ccccCCc-hhHHHHHH
Q 017167          206 VYLIGHCLSWSGWLVMQAPVLKKYP----ARLSVTAYTCFFGLIQFMIIAAIFERNLDA-----WIFHNGG-EVFSILYA  275 (376)
Q Consensus       206 ~l~l~a~~~~a~~~v~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-~~~~ll~~  275 (376)
                      ++.+.++++-++-..+.+.++++.+    +|....+...-.-.+.++|..+.+|+....     +...+.. .+..+...
T Consensus       167 ~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i  246 (349)
T KOG1443|consen  167 FLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLI  246 (349)
T ss_pred             HHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHH
Confidence            9999999999998888888888765    678888887777777888887777653221     1111222 22222222


Q ss_pred             HHHHHHHHHHH---HHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhc
Q 017167          276 GVVASGIAFAV---QIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLP  340 (376)
Q Consensus       276 g~~~~~~~~~l---~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~  340 (376)
                      +. ++..++.+   -+.-+.+.+....++..-..-+-+.+++.++.+|.++...|+|..+...|+.+.
T Consensus       247 ~l-~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~  313 (349)
T KOG1443|consen  247 SL-GGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH  313 (349)
T ss_pred             HH-HHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence            22 23333333   345677888889999999999999999999999999999999999999999998

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=99.12  E-value=6.9e-09  Score=95.34  Aligned_cols=221  Identities=11%  Similarity=0.060  Sum_probs=158.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCCccceeeccc-chhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHh
Q 017167           82 LNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQN-SVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGAT  160 (376)
Q Consensus        82 ~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~ii~~-~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~  160 (376)
                      .+.+...++.|++. .+++...+.++++.+++++-++.. .+-+.+.+.+.++++|--+.+++.  ...+++++.++|+.
T Consensus        42 ~~~~~~~~lsG~~W-~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~--~G~~Al~liiiGv~  118 (269)
T PF06800_consen   42 GTSFIVAFLSGAFW-AIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKI--IGFLALVLIIIGVI  118 (269)
T ss_pred             HHHHHHHHHHHHHH-HHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHH--HHHHHHHHHHHHHH
Confidence            47778888888886 799999999999999999999965 777789999999999987764221  34458888899998


Q ss_pred             hhhhccCCcccCCCCCCCCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHH
Q 017167          161 VITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTC  240 (376)
Q Consensus       161 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~  240 (376)
                      +.+..+++..+.          +             +..+...|+...+++++.|..|.+..|..  +. ++.....-+.
T Consensus       119 lts~~~~~~~~~----------~-------------~~~~~~kgi~~Ll~stigy~~Y~~~~~~~--~~-~~~~~~lPqa  172 (269)
T PF06800_consen  119 LTSYQDKKSDKS----------S-------------SKSNMKKGILALLISTIGYWIYSVIPKAF--HV-SGWSAFLPQA  172 (269)
T ss_pred             Hhcccccccccc----------c-------------cccchhhHHHHHHHHHHHHHHHHHHHHhc--CC-ChhHhHHHHH
Confidence            887432221100          0             23456789999999999999999996652  33 4555444332


Q ss_pred             HHHHHHH-HHHHHHhhcCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhC
Q 017167          241 FFGLIQF-MIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALG  319 (376)
Q Consensus       241 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~  319 (376)
                       .|.+.. ..+....+  ...+   + +.-+.-+..|++ -.++..++..+.++.+.+..=.+..+.++++.+.+.+++|
T Consensus       173 -iGm~i~a~i~~~~~~--~~~~---~-k~~~~nil~G~~-w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~  244 (269)
T PF06800_consen  173 -IGMLIGAFIFNLFSK--KPFF---E-KKSWKNILTGLI-WGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILK  244 (269)
T ss_pred             -HHHHHHHHHHhhccc--cccc---c-cchHHhhHHHHH-HHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEE
Confidence             233222 22222111  1111   2 223333556665 7888999999999999999999999999999999999999


Q ss_pred             Cccccccc----cchhhhhhhhhh
Q 017167          320 EEFYLGGY----VPATSPARSILL  339 (376)
Q Consensus       320 e~~~~~~~----iG~~lI~~gi~l  339 (376)
                      |+=+..++    +|..+++.|.++
T Consensus       245 E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  245 EKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             ecCchhhHHHHHHHHHHHHHhhhc
Confidence            99776644    688888877765

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.04  E-value=2.7e-09  Score=100.39  Aligned_cols=133  Identities=16%  Similarity=0.153  Sum_probs=102.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCcccccccCCchhHHHHHHHHHHHHHHH
Q 017167          205 CVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAF  284 (376)
Q Consensus       205 ~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~  284 (376)
                      .++.++++++++...+..|+..++.+ +  ...+.+..+.+.+.|+..... ....+...+ ..++.....+.++....+
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~~-~--~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~   77 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKEP-D--FLWWALLAHSVLLTPYGLWYL-AQVGWSRLP-ATFWLLLAISAVANMVYF   77 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCchh-H--HHHHHHHHHHHHHHHHHHHhc-ccCCCCCcc-hhhHHHHHHHHHHHHHHH
Confidence            46789999999999999998776642 3  346666666667777665321 112233222 334434444555688999


Q ss_pred             HHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhccc
Q 017167          285 AVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPNR  342 (376)
Q Consensus       285 ~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~~  342 (376)
                      .++++++++.+++.++++.+.+|+++.+++++++||+++..+++|..+++.|+++...
T Consensus        78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~  135 (281)
T TIGR03340        78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL  135 (281)
T ss_pred             HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999999999999999999999988654

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.03  E-value=3.2e-09  Score=100.55  Aligned_cols=137  Identities=13%  Similarity=0.103  Sum_probs=112.4

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHH
Q 017167           19 KLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITA   98 (376)
Q Consensus        19 ~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   98 (376)
                      ...|.++.++++++|+.+.+..|...++ .++..... -.+++.+++.++......  ....+...+...+..|+++..+
T Consensus       146 ~~~G~ll~l~aa~~~a~~~v~~r~~~~~-~~~~~~~~-~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~l~lgv~~t~~  221 (293)
T PRK10532        146 DLTGAALALGAGACWAIYILSGQRAGAE-HGPATVAI-GSLIAALIFVPIGALQAG--EALWHWSILPLGLAVAILSTAL  221 (293)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHH-HHHHHHHHHHHHHHHccC--cccCCHHHHHHHHHHHHHHHHH
Confidence            3569999999999999999999998764 77776644 445566666666544221  1224555566667899998899


Q ss_pred             HHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhc
Q 017167           99 NQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLY  165 (376)
Q Consensus        99 ~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~  165 (376)
                      ++.++++++++.++++++++.+++|+++.++++++++|+++.      .+++|.++.+.|++.....
T Consensus       222 ~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~------~~~iG~~lIl~~~~~~~~~  282 (293)
T PRK10532        222 PYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTL------IQWLALGAIIAASMGSTLT  282 (293)
T ss_pred             HHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcH------HHHHHHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999999999999      6999999999999998643

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.01  E-value=4.1e-10  Score=91.18  Aligned_cols=103  Identities=20%  Similarity=0.308  Sum_probs=86.0

Q ss_pred             HHHHHHHHHHHHHHHHhhhhc-c-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHH
Q 017167           55 VYRNIIAFLLLLPFAYFLEKK-E-RPAMTLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAI  132 (376)
Q Consensus        55 ~~r~~~a~l~l~~~~~~~~~~-~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l  132 (376)
                      .+|+..+.+++..+...+++. + .+..+++.+.+....|.++...++.++++|+++.+ +.++++.++.|+++.+++++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            579999999988888774432 1 12334455677778888876689999999999999 58889999999999999999


Q ss_pred             HhhccccccccCccceeehHhHHHHhHhhhhh
Q 017167          133 FRIEKVRLDRKDGIAKVVGTLFCVAGATVITL  164 (376)
Q Consensus       133 ~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~  164 (376)
                      ++|||+++      .++.++.++++|+.++..
T Consensus        81 ~~~er~~~------~~~~a~~l~~~Gv~li~~  106 (113)
T PF13536_consen   81 FFKERLSP------RRWLAILLILIGVILIAW  106 (113)
T ss_pred             HhcCCCCH------HHHHHHHHHHHHHHHHhh
Confidence            99999999      499999999999999973

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.99  E-value=4e-09  Score=99.80  Aligned_cols=137  Identities=16%  Similarity=0.074  Sum_probs=115.0

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHH
Q 017167           19 KLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITA   98 (376)
Q Consensus        19 ~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   98 (376)
                      ...|.++.++++++|+...+..|...+  -++.....++..++.+.+.++............+.+.+...+..++++..+
T Consensus       148 ~~~G~l~~l~a~~~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~  225 (292)
T PRK11272        148 NPWGAILILIASASWAFGSVWSSRLPL--PVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSII  225 (292)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhcCC--CcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHH
Confidence            356999999999999999999998643  235566788888888887777654322111123567788889999998889


Q ss_pred             HHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhh
Q 017167           99 NQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT  163 (376)
Q Consensus        99 ~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~  163 (376)
                      ++.+|++++++.++++++++.+++|+++++++++++||+++.      .+++|.++.+.|+.+..
T Consensus       226 ~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~------~~iiG~~lIi~gv~~~~  284 (292)
T PRK11272        226 AISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSP------IEWLALGVIVFAVVLVT  284 (292)
T ss_pred             HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcH------HHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999      69999999999999886

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.98  E-value=3.3e-09  Score=90.26  Aligned_cols=137  Identities=17%  Similarity=0.205  Sum_probs=114.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhC-----C-CcchhHHHHHHHHHHHHHHHHHHhhcCcccccc----c-----CCch
Q 017167          204 GCVYLIGHCLSWSGWLVMQAPVLKKY-----P-ARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIF----H-----NGGE  268 (376)
Q Consensus       204 G~~l~l~a~~~~a~~~v~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----~~~~  268 (376)
                      |.++++.+.++.+++.++.|+..++.     . ++.+...+....+.+.+++...+.|+.......    .     +...
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            67899999999999999999988773     2 788999999999999999988877653211110    0     2244


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhcc
Q 017167          269 VFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPN  341 (376)
Q Consensus       269 ~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~  341 (376)
                      +..++..|++ ...-....+..+++.+|...++.+.+..+...+++++++||++++.+++|.++.+.|.++++
T Consensus        81 ~~~~~~~~~~-~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys  152 (153)
T PF03151_consen   81 IFLLILSGLL-AFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS  152 (153)
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence            5566666665 66777788899999999999999999999999999999999999999999999999998875

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.97  E-value=2.9e-09  Score=100.90  Aligned_cols=139  Identities=12%  Similarity=0.187  Sum_probs=110.3

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCccccc--ccCCchhHHHHHHH
Q 017167          199 KNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWI--FHNGGEVFSILYAG  276 (376)
Q Consensus       199 ~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~g  276 (376)
                      ++..+|++++++++++|+...+..|.. .+. ++.+..++++.++.+.+.+.....+ +.....  ..+...+. ....+
T Consensus         4 ~~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~-~~~~~~~~R~~~a~~~l~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~   79 (296)
T PRK15430          4 KQTRQGVLLALAAYFIWGIAPAYFKLI-YYV-PADEILTHRVIWSFFFMVVLMSICR-QWSYLKTLIQTPQKIF-MLAVS   79 (296)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHh-cCC-CHHHHHHHHHHHHHHHHHHHHHHHc-cHHHHHHHHcCHHHHH-HHHHH
Confidence            355789999999999999999999764 556 5899999999999887776654332 111110  01222332 23355


Q ss_pred             HHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhcc
Q 017167          277 VVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPN  341 (376)
Q Consensus       277 ~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~  341 (376)
                      .++.+..+.++++++++.+++.++.+.++.|+++.++++++++|+++..+++|.++.+.|+++..
T Consensus        80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            56678889999999999999999999999999999999999999999999999999999988753

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=98.95  E-value=6.5e-10  Score=95.49  Aligned_cols=217  Identities=13%  Similarity=0.053  Sum_probs=160.9

Q ss_pred             HHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCC
Q 017167           97 TANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPP  176 (376)
Q Consensus        97 ~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~  176 (376)
                      +..+..|..|++.+++++++.+..+..-|+.+++++.+|+|+..      .++++.++++.|++++++.+.+        
T Consensus        64 t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~------~kIlaailAI~GiVmiay~DN~--------  129 (290)
T KOG4314|consen   64 TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMG------FKILAAILAIGGIVMIAYADNE--------  129 (290)
T ss_pred             ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhh------hhHHHHHHHhCcEEEEEeccch--------
Confidence            46788899999999999999999999999999999999999999      7999999999999999743221        


Q ss_pred             CCCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHH----HHHHHHH
Q 017167          177 LNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLI----QFMIIAA  252 (376)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~  252 (376)
                                           ..+...|+.++..++...++|-+.-|+...+.+ --....++...|.+    ...|...
T Consensus       130 ---------------------~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn-~Gdaa~FmS~LGF~NL~~~~~~~lI  187 (290)
T KOG4314|consen  130 ---------------------HADEIIGIACAVGSAFMAALYKVLFKMFIGNAN-FGDAAHFMSCLGFFNLCFISFPALI  187 (290)
T ss_pred             ---------------------hhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCc-chhHHHHHHHHHHHHHHHHhhhHHH
Confidence                                 234568999999999999999999999887653 22222333333322    1222222


Q ss_pred             HhhcCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhh
Q 017167          253 IFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATS  332 (376)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~l  332 (376)
                      +.-.+.+.|+...-..|+.+...+.+ +..-..+.+.++....|...|+-+.....-....+.++-+-+.+...+.|..+
T Consensus       188 L~~T~VE~~qsFA~~PWG~l~G~A~L-~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~i  266 (290)
T KOG4314|consen  188 LAFTGVEHLQSFAAAPWGCLCGAAGL-SLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCI  266 (290)
T ss_pred             HHHhchHHHHHHhhCCchhhhhHHHH-HHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHH
Confidence            11112223332223346666666665 33334556788888899999999999989999999886666789999999999


Q ss_pred             hhhhhhhccccccccchh
Q 017167          333 PARSILLPNRWMSTCMLS  350 (376)
Q Consensus       333 I~~gi~l~~~~~~~~~~~  350 (376)
                      |+.|-++...+++++++.
T Consensus       267 I~i~FiLiiiP~d~~eI~  284 (290)
T KOG4314|consen  267 ICIGFILIIIPEDKDEIG  284 (290)
T ss_pred             HHHhHHheecccchhhcc
Confidence            999999988777766653

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.94  E-value=1.3e-08  Score=98.79  Aligned_cols=136  Identities=10%  Similarity=0.135  Sum_probs=104.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc-hHHHHHHHHHHHHHHHHHHHhhhhccC----CCCCHHHHHHHHHHHHH
Q 017167           20 LQLHLAMVALQFGYAGFHVVSRAALNMGISK-LVFPVYRNIIAFLLLLPFAYFLEKKER----PAMTLNFALQFILLALV   94 (376)
Q Consensus        20 ~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~-~~~~~~r~~~a~l~l~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~   94 (376)
                      ..|..+++.++++|+.+.+..|...++ .++ ...+++....+.+.+.+......+.+.    ...+.. ....+..+++
T Consensus       188 ~lG~~l~l~aa~~wa~~~il~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~i~y~~i~  265 (358)
T PLN00411        188 LIGGALLTIQGIFVSVSFILQAHIMSE-YPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDIT-LITIVTMAII  265 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchH-HHHHHHHHHH
Confidence            558899999999999999999988775 554 455666666666655544443322111    112222 2234445555


Q ss_pred             HHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhh
Q 017167           95 GITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITL  164 (376)
Q Consensus        95 ~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~  164 (376)
                       ..+.+.++++++++.+++.+++..++.|++++++++++++|++++      .+++|.++.+.|+.++..
T Consensus       266 -t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~------~~~iG~~LIl~Gv~l~~~  328 (358)
T PLN00411        266 -TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYL------GCLIGGILITLGFYAVMW  328 (358)
T ss_pred             -HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcH------HHHHHHHHHHHHHHHHHh
Confidence             467888999999999999999999999999999999999999999      599999999999999873

>TIGR00688 rarD rarD protein

Probab=98.94  E-value=4.8e-09  Score=97.23  Aligned_cols=136  Identities=12%  Similarity=0.200  Sum_probs=108.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCc---ccccccCCch-hHHHHHHHHH
Q 017167          203 LGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNL---DAWIFHNGGE-VFSILYAGVV  278 (376)
Q Consensus       203 ~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~ll~~g~~  278 (376)
                      +|..++++++++|+...+..|. ..+. ++.++.+++++.+.+.+.+......+..   ......+..+ +..+...|++
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~-~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LKPL-PATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hccC-CHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            4889999999999999999997 4556 6999999999999888766654432110   0111111222 3345566665


Q ss_pred             HHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhcc
Q 017167          279 ASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPN  341 (376)
Q Consensus       279 ~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~  341 (376)
                       ..+.+.++++++++.+++.++.+.++.|+++.++++++++|+++..+++|..+.+.|+++..
T Consensus        80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence             78889999999999999999999999999999999999999999999999999999988763

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.86  E-value=1.8e-08  Score=95.49  Aligned_cols=133  Identities=15%  Similarity=0.152  Sum_probs=103.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHHH
Q 017167           20 LQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITAN   99 (376)
Q Consensus        20 ~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   99 (376)
                      ..|.++++.++++|+.+.+..|...+ +.++.....   ..+.+.+.+...... ......+.+.+...+..|+ ...++
T Consensus       155 ~~G~~~~l~aa~~~A~~~v~~k~~~~-~~~~~~~~~---~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~~~-~t~~~  228 (295)
T PRK11689        155 PLSYGLAFIGAFIWAAYCNVTRKYAR-GKNGITLFF---ILTALALWIKYFLSP-QPAMVFSLPAIIKLLLAAA-AMGFG  228 (295)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccC-CCCchhHHH---HHHHHHHHHHHHHhc-CccccCCHHHHHHHHHHHH-HHHHH
Confidence            45899999999999999999999866 477765422   233333333222222 1122355667777777665 45789


Q ss_pred             HHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhh
Q 017167          100 QGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITL  164 (376)
Q Consensus       100 ~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~  164 (376)
                      +.++++++++.++++++.+.+++|++++++++++++|+++.      .+++|.++.+.|+.+...
T Consensus       229 ~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~------~~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        229 YAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSF------SFWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcH------HHHHHHHHHHHhHHHHhh
Confidence            99999999999999999999999999999999999999999      699999999999988863

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.82  E-value=5.2e-08  Score=92.48  Aligned_cols=137  Identities=15%  Similarity=0.228  Sum_probs=107.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCch---HHHHHHHHHHHHHHHHHHHhhhhc-----cCCCCCHHHHHHHHHH
Q 017167           20 LQLHLAMVALQFGYAGFHVVSRAALNMGISKL---VFPVYRNIIAFLLLLPFAYFLEKK-----ERPAMTLNFALQFILL   91 (376)
Q Consensus        20 ~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~---~~~~~r~~~a~l~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~   91 (376)
                      ..|.+++++++++|+...+..|...++ .++.   ....+-...+.+.+.......+..     .....+.+.+...+..
T Consensus       142 ~~G~~l~l~aal~~a~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  220 (299)
T PRK11453        142 MLGFMLTLAAAFSWACGNIFNKKIMSH-STRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYL  220 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcc-cCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHH
Confidence            469999999999999999999997653 3322   333333444333333222222211     1124567788899999


Q ss_pred             HHHHHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhh
Q 017167           92 ALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT  163 (376)
Q Consensus        92 g~~~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~  163 (376)
                      |+++..+++.+++.++++.++++++.+..++|+++.++++++++|+++.      .+++|.++.+.|+.+..
T Consensus       221 ~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~------~~~iG~~lI~~gv~l~~  286 (299)
T PRK11453        221 AFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTG------LQFLGAVLIMAGLYINV  286 (299)
T ss_pred             HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccH------HHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999999999999      69999999999998875

>PRK13499 rhamnose-proton symporter; Provisional

Probab=98.81  E-value=6.9e-07  Score=85.40  Aligned_cols=299  Identities=11%  Similarity=-0.027  Sum_probs=178.9

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHH-HHHHHHHHHH---HHHHhh-hhccCCCCCHHHHHHHHHHH
Q 017167           18 EKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVY-RNIIAFLLLL---PFAYFL-EKKERPAMTLNFALQFILLA   92 (376)
Q Consensus        18 ~~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~-r~~~a~l~l~---~~~~~~-~~~~~~~~~~~~~~~~~~~g   92 (376)
                      +...|+++.++++++||..+...|.. +. .+ +|.-+. -.+++.++.-   ...... --.+....+.+.+...++.|
T Consensus         4 ~~~~G~~~~~i~~~~~GS~~~p~K~~-k~-w~-wE~~W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G   80 (345)
T PRK13499          4 AIILGIIWHLIGGASSGSFYAPFKKV-KK-WS-WETMWSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFG   80 (345)
T ss_pred             hhHHHHHHHHHHHHHhhccccccccc-CC-Cc-hhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHH
Confidence            35679999999999999999999983 32 33 332221 1112111111   111110 01122345677778888888


Q ss_pred             HHHHHHHHHHHHHhcccCCccceeec-ccchhHHHHHHHHHHhhccc---cccccCccceeehHhHHHHhHhhhhhccCC
Q 017167           93 LVGITANQGFYLLGLENTSPTFASAI-QNSVPAITFLMAAIFRIEKV---RLDRKDGIAKVVGTLFCVAGATVITLYKGP  168 (376)
Q Consensus        93 ~~~~~~~~~~~~~al~~~~~~~a~ii-~~~~Pl~~~lla~l~l~e~~---~~~~~~~~~~~igi~l~~~Gv~li~~~~~~  168 (376)
                      ++- .+++..++.++++.+.+.+..+ ..++-+...++..++++|=-   +.+  .+....+|+++.++|+.+... .+.
T Consensus        81 ~~W-~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~--~g~~~~~gv~liliGi~l~s~-Ag~  156 (345)
T PRK13499         81 ALW-GIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATN--GGRMTLLGVLVALIGVAIVGR-AGQ  156 (345)
T ss_pred             HHH-HhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccc--hHHHHHHHHHHHHHHHHHHHH-hhh
Confidence            886 7999999999999999999988 45888999999999988643   321  223577899999999999974 121


Q ss_pred             cccCCCCCCCCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHH-------HHHHHhhhhCCCcchhHHHHHH
Q 017167          169 TIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWL-------VMQAPVLKKYPARLSVTAYTCF  241 (376)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~-------v~~~~~~~~~~~~~~~~~~~~~  241 (376)
                      ..++..   . ++++             .+++..+|+..++++++.++.|.       ...+...+...++.....-+..
T Consensus       157 ~k~~~~---~-~~~~-------------~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~  219 (345)
T PRK13499        157 LKERKM---G-IKKA-------------EEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYV  219 (345)
T ss_pred             hccccc---c-cccc-------------cccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHH
Confidence            111000   0 0000             34667899999999999999999       4332211111123332222222


Q ss_pred             ---HHHHHHHHHHHHh---h-cCcccccc-c-CCchhHHH----HHHHHHHHHHHHHHHHHHHhcCCceeee----ecch
Q 017167          242 ---FGLIQFMIIAAIF---E-RNLDAWIF-H-NGGEVFSI----LYAGVVASGIAFAVQIWCIDRGGPVFVA----VYQP  304 (376)
Q Consensus       242 ---~~~~~~~~~~~~~---~-~~~~~~~~-~-~~~~~~~l----l~~g~~~~~~~~~l~~~al~~~~a~~~s----~~~~  304 (376)
                         .+.+..-......   . +....... . +...+..-    ...|+. =.+++.+|..+..+.+.....    +.+.
T Consensus       220 ~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~-W~~~~~~y~~~~~~~g~~~~~~sw~l~m~  298 (345)
T PRK13499        220 VIMGGGAITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVM-WYLQFFFYAMGHSKLGAQYDFVSWMLHMS  298 (345)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCCccchHHHHHhcc
Confidence               4433322211111   1 11110111 0 11111222    344443 567777888888887655443    3347


Q ss_pred             hHHHHHHHHHHHHhCCccc------cccccchhhhhhhhhhccc
Q 017167          305 VQTLVVAIMASFALGEEFY------LGGYVPATSPARSILLPNR  342 (376)
Q Consensus       305 l~pv~a~l~~~l~l~e~~~------~~~~iG~~lI~~gi~l~~~  342 (376)
                      +..+++.+.+. +++|.=+      ...++|.+++++|.++...
T Consensus       299 ~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~  341 (345)
T PRK13499        299 FYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGL  341 (345)
T ss_pred             HHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhh
Confidence            77799999998 5999866      4557899999999888643

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=98.78  E-value=3.6e-08  Score=89.04  Aligned_cols=269  Identities=14%  Similarity=0.092  Sum_probs=189.4

Q ss_pred             HHHHHHHhc---CC-CchHHHHHHHHHHHHHHHHHHHhhhh----ccCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 017167           38 VVSRAALNM---GI-SKLVFPVYRNIIAFLLLLPFAYFLEK----KERP--AMTLNFALQFILLALVGITANQGFYLLGL  107 (376)
Q Consensus        38 ~~~k~~~~~---~~-~~~~~~~~r~~~a~l~l~~~~~~~~~----~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~al  107 (376)
                      ...|++++.   .. .|...++.+.+....+-..+.....+    .+.+  +++.+..+..+-+.+.- .+.-.+-.+.+
T Consensus        45 f~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVf-i~mI~fnnlcL  123 (347)
T KOG1442|consen   45 FLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVF-ILMISFNNLCL  123 (347)
T ss_pred             hhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhhee-eeehhccceeh
Confidence            345555542   12 26677788887776665555543322    1222  34444445555555442 34555567899


Q ss_pred             ccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCCCCCCCCCCcch
Q 017167          108 ENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTS  187 (376)
Q Consensus       108 ~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~  187 (376)
                      ++.+++.-.+=.++..+|+++++++++|+|-+.      ....+..+.+.|-.+=.  +.+.                  
T Consensus       124 ~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~------~~~~~C~lIi~GF~lGv--dqE~------------------  177 (347)
T KOG1442|consen  124 KYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSF------FALGCCLLIILGFGLGV--DQEG------------------  177 (347)
T ss_pred             hhcceEEEEeccchhhhHHHHhHHhhccccccc------ccceeehhheehheecc--cccc------------------
Confidence            999999999999999999999999999999888      35666666666655433  1111                  


Q ss_pred             hhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCC-cchhHHHHHHHHHHHHHHHHHHhhcCccccc---c
Q 017167          188 TIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPA-RLSVTAYTCFFGLIQFMIIAAIFERNLDAWI---F  263 (376)
Q Consensus       188 ~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~  263 (376)
                              +.+.-...|.++++.|+++-|+..+..|+......| -...++++++.+.++++|...+.++....+.   .
T Consensus       178 --------~~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l  249 (347)
T KOG1442|consen  178 --------STGTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHL  249 (347)
T ss_pred             --------ccCccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccc
Confidence                    133445789999999999999999998876654432 3577888999999999998887543212221   2


Q ss_pred             cCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhccc
Q 017167          264 HNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPNR  342 (376)
Q Consensus       264 ~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~~  342 (376)
                      .+...|..+.+.|+++..++|. -.+-+|-.+|..-++-..-.-..-.+++..+++|.-+...|-|-.+++.|-..+.+
T Consensus       250 ~a~~Fw~~mtLsglfgF~mgyv-Tg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~  327 (347)
T KOG1442|consen  250 PAIKFWILMTLSGLFGFAMGYV-TGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTL  327 (347)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhe-eeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHH
Confidence            2345677777778776555554 34667888888888888888888899999999999999999999999999888754

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.78  E-value=2e-07  Score=88.19  Aligned_cols=283  Identities=13%  Similarity=0.041  Sum_probs=156.9

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHH
Q 017167           18 EKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGIT   97 (376)
Q Consensus        18 ~~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   97 (376)
                      +...|....+.++++-+....+-|....+ .+.-.   .|                ++..++...+  ....+.|.....
T Consensus         4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r-~~~~~---~~----------------~~~~~~~~l~--~~~W~~G~~~~~   61 (300)
T PF05653_consen    4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLR-LPRGS---LR----------------AGSGGRSYLR--RPLWWIGLLLMV   61 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhccc---cc----------------ccchhhHHHh--hHHHHHHHHHHh
Confidence            35679999999999999999988887653 11100   00                0000000011  122334444456


Q ss_pred             HHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCCC
Q 017167           98 ANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPL  177 (376)
Q Consensus        98 ~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~~  177 (376)
                      ++..+-+.|+.+.|++..+++....-++.++++..++|||++.      .++.|+.+++.|..++... ++.++.     
T Consensus        62 ~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~------~~~~G~~l~i~G~~liv~~-~~~~~~-----  129 (300)
T PF05653_consen   62 LGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTR------RDIVGCALIILGSVLIVIF-APKEEP-----  129 (300)
T ss_pred             cchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchH------hHHhhHHHHHhhheeeEEe-CCCCCC-----
Confidence            7788889999999999999999999999999999999999999      5999999999999988643 322111     


Q ss_pred             CCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHH---HHHHH-
Q 017167          178 NQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFM---IIAAI-  253 (376)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-  253 (376)
                           .++.+.....-   .+..+ +-....... +...+.....+|..++  +...........|....+   ..... 
T Consensus       130 -----~~t~~~l~~~~---~~~~f-l~y~~~~~~-~~~~L~~~~~~r~g~~--~i~vyi~i~sl~Gs~tvl~~K~i~~~i  197 (300)
T PF05653_consen  130 -----IHTLDELIALL---SQPGF-LVYFILVLV-LILILIFFIKPRYGRR--NILVYISICSLIGSFTVLSAKAISILI  197 (300)
T ss_pred             -----cCCHHHHHHHh---cCcce-ehhHHHHHH-HHHHHHHhhcchhccc--ceEEEEEEeccccchhhhHHHHHHHHH
Confidence                 00001111000   01111 111111111 1222222222221111  111111111122211111   01111 


Q ss_pred             hhcCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhH-HHHHHHHHHHHhCCc--ccc----cc
Q 017167          254 FERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQ-TLVVAIMASFALGEE--FYL----GG  326 (376)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~-pv~a~l~~~l~l~e~--~~~----~~  326 (376)
                      ......+....++..|..++. -+.+........++++++.+++.+.++.+.- ...+.+-+.++++|-  .++    ..
T Consensus       198 ~~~~~g~~~f~~~~~y~l~~~-~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~  276 (300)
T PF05653_consen  198 KLTFSGDNQFTYPLTYLLLLV-LVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGF  276 (300)
T ss_pred             HHHhcCchhhhhhHHHHHHHH-HHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHH
Confidence            110001111123333433333 3334566667788999999999988776654 455666677778876  444    34


Q ss_pred             ccchhhhhhhhhhcccccccc
Q 017167          327 YVPATSPARSILLPNRWMSTC  347 (376)
Q Consensus       327 ~iG~~lI~~gi~l~~~~~~~~  347 (376)
                      ..|..+++.|+++.++++++.
T Consensus       277 ~~G~~~ii~GV~lL~~~~~~~  297 (300)
T PF05653_consen  277 LCGFLIIIIGVFLLSSSKDKE  297 (300)
T ss_pred             HHHHHHHHHhhheeeccCchh
Confidence            578888999999998766654

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.77  E-value=5.5e-08  Score=80.28  Aligned_cols=123  Identities=13%  Similarity=0.033  Sum_probs=95.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCcccccccCCchhHHHHHHHHHHHHH
Q 017167          203 LGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGI  282 (376)
Q Consensus       203 ~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~  282 (376)
                      .|.++.+.+.++-+...++-|+..++.+ +.+.... .    .. .....     .      ++   ...++.|+++.++
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g-~~~~~~~-~----~~-~~~~~-----~------~p---~~~i~lgl~~~~l   60 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLP-LLSHAWD-F----IA-ALLAF-----G------LA---LRAVLLGLAGYAL   60 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCC-CccchhH-H----HH-HHHHH-----h------cc---HHHHHHHHHHHHH
Confidence            4788899999999999999999888764 2221111 0    00 00011     0      11   1247778888999


Q ss_pred             HHHHHHHHHhcCCceeeeecchhHHHHHHHHHHH--HhCCccccccccchhhhhhhhhhccccccc
Q 017167          283 AFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASF--ALGEEFYLGGYVPATSPARSILLPNRWMST  346 (376)
Q Consensus       283 ~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l--~l~e~~~~~~~iG~~lI~~gi~l~~~~~~~  346 (376)
                      ++.+|.+++++.+.+.+..+....++...+.++.  ++||++++.+++|.++|++|+++.++++++
T Consensus        61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~~  126 (129)
T PRK02971         61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTTK  126 (129)
T ss_pred             HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCCC
Confidence            9999999999999999999999998888888875  899999999999999999999999876554

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=98.75  E-value=5.5e-08  Score=87.96  Aligned_cols=258  Identities=14%  Similarity=0.105  Sum_probs=168.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccc-CCccceeecccchhHHHHHHH
Q 017167           52 VFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFYLLGLEN-TSPTFASAIQNSVPAITFLMA  130 (376)
Q Consensus        52 ~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~-~~~~~a~ii~~~~Pl~~~lla  130 (376)
                      .+++.++++-+.--+++--... ...++.+.|++.  .....  +...+++-.+++++ ++...=.++-+-.++.+.+++
T Consensus        35 LITFaqFlFia~eGlif~skf~-~~k~kiplk~Y~--i~V~m--FF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g  109 (330)
T KOG1583|consen   35 LITFAQFLFIATEGLIFTSKFF-TVKPKIPLKDYA--ITVAM--FFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILG  109 (330)
T ss_pred             ehHHHHHHHHHHhceeeecccc-ccCCCCchhhhh--eehhe--eeeeeeeccceeeecccceEEEEEecCcHHHHHHHH
Confidence            4556666554443333221000 112455555432  22222  24567777888887 455666677888999999999


Q ss_pred             HHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCCCCCCCCCCcchhhhccccCCCCCchhhHHHHHHH
Q 017167          131 AIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIG  210 (376)
Q Consensus       131 ~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~  210 (376)
                      |+++|+|-+.      .|+.++++..+|+++.++.+....++-.++..+.+.            ++....+..|+.+...
T Consensus       110 ~il~~k~Ys~------~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~------------~~~~~~w~iGi~lL~~  171 (330)
T KOG1583|consen  110 WILLGKRYSL------RQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSA------------QSDFFWWLIGIALLVF  171 (330)
T ss_pred             HHhccceeeh------hhhhhHHhhhhhheeEEeecCcchhhhhcccccCcc------------cccchHHHHHHHHHHH
Confidence            9999999888      599999999999999986544433321111111111            0144667899999999


Q ss_pred             HHHHHHHHHHHHHHhhhhCC-CcchhHHHHHHHHHHHHHHHHHHhhcC-ccccc--------------ccCCchhHHHHH
Q 017167          211 HCLSWSGWLVMQAPVLKKYP-ARLSVTAYTCFFGLIQFMIIAAIFERN-LDAWI--------------FHNGGEVFSILY  274 (376)
Q Consensus       211 a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--------------~~~~~~~~~ll~  274 (376)
                      +-+.-|.-.++++...|++. ++.+..+|.=+.....++.    .+.+ .++|.              ..-+..|..+  
T Consensus       172 al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf----~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yL--  245 (330)
T KOG1583|consen  172 ALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLF----MGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYL--  245 (330)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHH----hcchHHHHHHHHhcCcceeccccCccccHHHHHH--
Confidence            99999999999988888774 6777777776655444332    2111 01111              0112233333  


Q ss_pred             HHHHHHHHHHHHHHHHHhc----CCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhcc
Q 017167          275 AGVVASGIAFAVQIWCIDR----GGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPN  341 (376)
Q Consensus       275 ~g~~~~~~~~~l~~~al~~----~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~  341 (376)
                         +..++.|+.-.+++-.    .++-.++++..++-.++++++.+.++++++++.|+|..++..|.++..
T Consensus       246 ---l~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa  313 (330)
T KOG1583|consen  246 ---LFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFA  313 (330)
T ss_pred             ---HHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHH
Confidence               2355666665555544    456788899999999999999999999999999999999999998853

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.71  E-value=5.5e-08  Score=92.44  Aligned_cols=140  Identities=17%  Similarity=0.200  Sum_probs=107.4

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCchHHHHHHHHHHHHHHHHHHHhhhhccCCC---------CCHHHHHH-
Q 017167           19 KLQLHLAMVALQFGYAGFHVVSRAALNM-GISKLVFPVYRNIIAFLLLLPFAYFLEKKERPA---------MTLNFALQ-   87 (376)
Q Consensus        19 ~~~g~~~~lla~~~~g~~~~~~k~~~~~-~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~---------~~~~~~~~-   87 (376)
                      ...|.+++++++++|+...+..|...++ +.++.....+....+.+.+.++....+......         ........ 
T Consensus       143 ~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (302)
T TIGR00817       143 NWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTV  222 (302)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHH
Confidence            4569999999999999999999998762 389999999999999999988876543211000         01011111 


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhh
Q 017167           88 FILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITL  164 (376)
Q Consensus        88 ~~~~g~~~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~  164 (376)
                      .+..+.......+.+++.+++++++.++++.....|++++++++++++|+++.      .+++|.++++.|+.+...
T Consensus       223 ~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~------~~~~G~~lil~Gv~l~~~  293 (302)
T TIGR00817       223 SLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISP------QQVFGTGIAIAGVFLYSR  293 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCch------hHHHHHHHHHHHHHHHHH
Confidence            22222222233446777899999999999999999999999999999999999      599999999999998863

specificities overlap.

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=98.70  E-value=5.6e-08  Score=88.02  Aligned_cols=278  Identities=16%  Similarity=0.108  Sum_probs=188.2

Q ss_pred             HHHHHHHHHHh---cCC----CchHHHHHHHHHHHHHHHHHHHhhhhccCCC-------------CCHHHHHHHHHHHHH
Q 017167           35 GFHVVSRAALN---MGI----SKLVFPVYRNIIAFLLLLPFAYFLEKKERPA-------------MTLNFALQFILLALV   94 (376)
Q Consensus        35 ~~~~~~k~~~~---~~~----~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~-------------~~~~~~~~~~~~g~~   94 (376)
                      .+.+.+|++-+   +|-    +|......-++--+++++.+...+.+...+.             .+.+. ..++.=+++
T Consensus        17 ~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p-~lfl~Pal~   95 (372)
T KOG3912|consen   17 FNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNP-VLFLPPALC   95 (372)
T ss_pred             HHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCc-ceecChHHH
Confidence            45667777642   122    2455555555555677777666554422210             01111 222333444


Q ss_pred             HHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCC
Q 017167           95 GITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPA  174 (376)
Q Consensus        95 ~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~  174 (376)
                      - ..+..+.|.++.+++++.-+.+....-+|+.+++.-+++++++.      ++|.|+.....|++++...+-....   
T Consensus        96 D-i~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~------~qWl~i~fv~lGlviVg~~d~~~~~---  165 (372)
T KOG3912|consen   96 D-IAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITG------RQWLGILFVSLGLVIVGSLDVHLVT---  165 (372)
T ss_pred             H-HhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccch------hhHHHHHHHHhhhheeeeeeccccc---
Confidence            4 46778899999999999999999999999999999999999999      5999999999999998532111100   


Q ss_pred             CCCCCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCC-CcchhHHHHHHHHHHHHHHHHHH
Q 017167          175 PPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYP-ARLSVTAYTCFFGLIQFMIIAAI  253 (376)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  253 (376)
                                        ++..+.+....|+++.+.+=+.-|+.++.-+|..+++. +|.....|.-.+|.+.+..++..
T Consensus       166 ------------------~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~  227 (372)
T KOG3912|consen  166 ------------------DPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIP  227 (372)
T ss_pred             ------------------CCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHH
Confidence                              01002355678999999999999999999999888765 78899999988886665554444


Q ss_pred             hhc-Ccc-cccccC---CchhH---------HHHHHHHHHHHHHHHHHH----HHHhcCCceeeeecchhHHHHHHHHHH
Q 017167          254 FER-NLD-AWIFHN---GGEVF---------SILYAGVVASGIAFAVQI----WCIDRGGPVFVAVYQPVQTLVVAIMAS  315 (376)
Q Consensus       254 ~~~-~~~-~~~~~~---~~~~~---------~ll~~g~~~~~~~~~l~~----~al~~~~a~~~s~~~~l~pv~a~l~~~  315 (376)
                      +.. +.. .+...+   ..+|.         ..+++...+..++..+++    .-.|+.+++.=.++..+...+.=+++.
T Consensus       228 m~yi~~~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si  307 (372)
T KOG3912|consen  228 MYYIPSGDSFSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSI  307 (372)
T ss_pred             HhheecCCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHH
Confidence            321 111 111100   11121         122333333444444444    335667777778888889998889999


Q ss_pred             HHhCCccccccccchhhhhhhhhhcc
Q 017167          316 FALGEEFYLGGYVPATSPARSILLPN  341 (376)
Q Consensus       316 l~l~e~~~~~~~iG~~lI~~gi~l~~  341 (376)
                      ....|.+...|+.|.++.+.|+++++
T Consensus       308 ~m~~E~f~llqilGFliLi~Gi~lY~  333 (372)
T KOG3912|consen  308 AMGWEYFHLLQILGFLILIMGIILYN  333 (372)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999986

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.69  E-value=3.7e-07  Score=82.46  Aligned_cols=306  Identities=13%  Similarity=0.102  Sum_probs=203.1

Q ss_pred             ccchHHHHHHHHHHHHHH-HHHHHHHHHHhc-CCCch--HHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHH
Q 017167           17 PEKLQLHLAMVALQFGYA-GFHVVSRAALNM-GISKL--VFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLA   92 (376)
Q Consensus        17 ~~~~~g~~~~lla~~~~g-~~~~~~k~~~~~-~~~~~--~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g   92 (376)
                      ++++..++....+.++.- .+...-.+..+. ++.|.  -+++.++++-..+.+..+...+ .+++..++|   .+..++
T Consensus        38 kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~-~k~r~iP~r---tY~~la  113 (367)
T KOG1582|consen   38 KPKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQ-TKRRVIPWR---TYVILA  113 (367)
T ss_pred             CchhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEeec-ccceecchh---HhhhhH
Confidence            345555554444433322 233333333332 56653  5666676665444443332221 122233444   344444


Q ss_pred             HHHHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccC
Q 017167           93 LVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYS  172 (376)
Q Consensus        93 ~~~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~  172 (376)
                      .+. .....+-.-++.|+.-..-.+...+--+=+.+.+.++-|.|-++      .+.++..+...|.++..+.+.+.   
T Consensus       114 ~~t-~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v------~d~~aA~lm~lGli~FTLADs~~---  183 (367)
T KOG1582|consen  114 FLT-VGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGV------HDYIAAMLMSLGLIWFTLADSQT---  183 (367)
T ss_pred             hhh-hhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccH------HHHHHHHHHHHHHHhhhhccccc---
Confidence            443 23444455566666655555555566666677888887777777      79999999999999998644332   


Q ss_pred             CCCCCCCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCC-CcchhHHHHHHHHHHHHHHHH
Q 017167          173 PAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYP-ARLSVTAYTCFFGLIQFMIIA  251 (376)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  251 (376)
                                              ..+-+.+|+.+.=+|-++-|.-.-++++..+.++ ...++.++...+|.+.++...
T Consensus       184 ------------------------sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~m  239 (367)
T KOG1582|consen  184 ------------------------SPNFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPM  239 (367)
T ss_pred             ------------------------CCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHH
Confidence                                    2344568999888888888888888888888876 556888999999998888777


Q ss_pred             HHhhcCcccccc---cCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCcccccccc
Q 017167          252 AIFERNLDAWIF---HNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYV  328 (376)
Q Consensus       252 ~~~~~~~~~~~~---~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~i  328 (376)
                      ..+++-...|+.   .+.+..+..++.+.. +.+++.....-++..++..+..+...+--+++++++++|..++|....-
T Consensus       240 vlTge~f~a~~fcaehp~~tyGy~~~~s~~-gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~  318 (367)
T KOG1582|consen  240 VLTGELFSAWTFCAEHPVRTYGYAFLFSLA-GYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVW  318 (367)
T ss_pred             HhcccchhhhHHHHhCcHhHHHHHHHHHHH-hHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhh
Confidence            766654444432   122345555555553 6777788888889999999999999999999999999999999999999


Q ss_pred             chhhhhhhhhhccc-cccccchhhHHHHHHhHhh
Q 017167          329 PATSPARSILLPNR-WMSTCMLSFWIQMFVCLTA  361 (376)
Q Consensus       329 G~~lI~~gi~l~~~-~~~~~~~~~~~~~~~~~~~  361 (376)
                      |..+++.|+++--- ++.+.+++..+|-+.-..+
T Consensus       319 ~gllv~lgI~Ln~ysk~nk~~~~~~~~r~~~~~~  352 (367)
T KOG1582|consen  319 SGLLVVLGIYLNMYSKRNKIPLASLIRRIVARAA  352 (367)
T ss_pred             hhHHHHHHHHhhcccCCCCCchhhHHhhhhhhhc
Confidence            99999999999643 2355555566665554443

>TIGR00803 nst UDP-galactose transporter

Probab=98.67  E-value=3.5e-08  Score=89.51  Aligned_cols=204  Identities=11%  Similarity=-0.049  Sum_probs=125.4

Q ss_pred             ceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcc-----------cCCCCCCCCCCC
Q 017167          114 FASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTI-----------YSPAPPLNQIQP  182 (376)
Q Consensus       114 ~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~-----------~~~~~~~~~~~~  182 (376)
                      ......+..++++++.++...+||.+.      .++++.++...|+......+.+..           .+.+++. +   
T Consensus         6 a~~~~~s~~l~~v~l~~~~~~~~~~~~------~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~-~---   75 (222)
T TIGR00803         6 IHIIFKQNNLVLIALGNLLAAGKQVTQ------LKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSS-A---   75 (222)
T ss_pred             chHHHHhcchHHHHHhcccccceeeeh------HHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCC-c---
Confidence            334556677888888888888888775      588888888888775442211110           0000000 0   


Q ss_pred             CCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHH-HHHHHHHHHHHHHHHhhcCcccc
Q 017167          183 DSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAY-TCFFGLIQFMIIAAIFERNLDAW  261 (376)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  261 (376)
                               ...  ...+...|....+.+.++-+...++.++..|+.+........ ....+.+.........+.+... 
T Consensus        76 ---------~~~--~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-  143 (222)
T TIGR00803        76 ---------KTL--MFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLIS-  143 (222)
T ss_pred             ---------ccc--ccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhh-
Confidence                     000  123456788888888888888999988876554211111111 1122222111111111111000 


Q ss_pred             cccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhh
Q 017167          262 IFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILL  339 (376)
Q Consensus       262 ~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l  339 (376)
                      .......+....+.-++..+++..+..+.+|+.++...+....++++++.+++++++||+++..+++|..+++.|+++
T Consensus       144 ~~~~~~~~~~~~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       144 NFGFFIGYPTAVWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             ccCcccCCchHHHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            000011122223333345778888999999999999999999999999999999999999999999999999999876

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.55  E-value=1.5e-07  Score=76.09  Aligned_cols=105  Identities=14%  Similarity=0.230  Sum_probs=79.9

Q ss_pred             HHHHHHHHHHHHHHHHhhcCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHH
Q 017167          238 YTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFA  317 (376)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~  317 (376)
                      ++...+.+.............+.+.....+.+...+..|+++...++.++++++++.++ .++.+..++|+++.++++++
T Consensus         3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~   81 (113)
T PF13536_consen    3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLF   81 (113)
T ss_pred             HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHH
Confidence            45555566655555543221111222233556667777887667999999999999995 88899999999999999999


Q ss_pred             hCCccccccccchhhhhhhhhhcccc
Q 017167          318 LGEEFYLGGYVPATSPARSILLPNRW  343 (376)
Q Consensus       318 l~e~~~~~~~iG~~lI~~gi~l~~~~  343 (376)
                      ++|+++..+++|..++..|+++..-.
T Consensus        82 ~~er~~~~~~~a~~l~~~Gv~li~~~  107 (113)
T PF13536_consen   82 FKERLSPRRWLAILLILIGVILIAWS  107 (113)
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHhhh
Confidence            99999999999999999999997643

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.53  E-value=8.4e-07  Score=75.34  Aligned_cols=133  Identities=23%  Similarity=0.318  Sum_probs=113.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc------CCCchHHHHHHHHHHHHHHHHHHHhhhhccCC----CC-------CHHH
Q 017167           22 LHLAMVALQFGYAGFHVVSRAALNM------GISKLVFPVYRNIIAFLLLLPFAYFLEKKERP----AM-------TLNF   84 (376)
Q Consensus        22 g~~~~lla~~~~g~~~~~~k~~~~~------~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~----~~-------~~~~   84 (376)
                      |.++++.+.++.+...+..|...++      +.++.+...+....+.+++.+.....++.+..    ..       ..+.
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            4678999999999999999998865      68999999999999999999998776543211    01       2345


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhh
Q 017167           85 ALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATV  161 (376)
Q Consensus        85 ~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~l  161 (376)
                      +..++..|+++ ...+...+..++++++...+++.....+.+.++++++++|+++.      .+++|++++++|+.+
T Consensus        81 ~~~~~~~~~~~-~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~------~~~~G~~l~~~G~~~  150 (153)
T PF03151_consen   81 IFLLILSGLLA-FLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITP------LQIIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCH------HHHHHHHHHHHHHhe
Confidence            56666777776 57888999999999999999999999999999999999999999      599999999999875

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.50  E-value=1.6e-06  Score=84.25  Aligned_cols=152  Identities=12%  Similarity=0.088  Sum_probs=109.7

Q ss_pred             HHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCccccccc-CCchhHHHHHHHHHHHHHHHHHH
Q 017167          209 IGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFH-NGGEVFSILYAGVVASGIAFAVQ  287 (376)
Q Consensus       209 l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~g~~~~~~~~~l~  287 (376)
                      +.==.+...++...|...+..+-|..++.++++.+.+....... .+.. ...+.. ....+..++..|++ ....+...
T Consensus        55 ~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~-~~~~-~~~~~~~~~~~~~~llp~gl~-~~~~~~~~  131 (350)
T PTZ00343         55 LTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWA-TGFR-KIPRIKSLKLFLKNFLPQGLC-HLFVHFGA  131 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHH-hCCC-CCCCCCCHHHHHHHHHHHHHH-HHHHHHHH
Confidence            33334445667788999988844999999999999876544432 1111 111111 12356678888887 44457777


Q ss_pred             HHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhccccccccchhhHHHHHHhHhhhccc
Q 017167          288 IWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPNRWMSTCMLSFWIQMFVCLTAICSG  365 (376)
Q Consensus       288 ~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (376)
                      +.++++.+++..+++..++|++++++++++++|+++..+++|..++++|+.+....  +.+.+.++=.+++.++.|.+
T Consensus       132 ~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~--~~~~~~~G~~~~l~s~~~~a  207 (350)
T PTZ00343        132 VISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVK--ELHFTWLAFWCAMLSNLGSS  207 (350)
T ss_pred             HHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecc--cchhHHHHHHHHHHHHHHHH
Confidence            89999999999999999999999999999999999999999999999999997632  22333445555555555543

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.44  E-value=2.5e-06  Score=80.61  Aligned_cols=129  Identities=19%  Similarity=0.210  Sum_probs=102.6

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHH----HHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHH
Q 017167           19 KLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNI----IAFLLLLPFAYFLEKKERPAMTLNFALQFILLALV   94 (376)
Q Consensus        19 ~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~----~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   94 (376)
                      .++|+++.+++++.|+.+....|..   +.+|...++....    .+.+++.++    ++ .++ ...+..+..+..|++
T Consensus       150 ~~~Gi~~~l~sg~~y~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~----~~-~~~-~~~~~~~~~~~~Gi~  220 (290)
T TIGR00776       150 FKKGILLLLMSTIGYLVYVVVAKAF---GVDGLSVLLPQAIGMVIGGIIFNLGH----IL-AKP-LKKYAILLNILPGLM  220 (290)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHc---CCCcceehhHHHHHHHHHHHHHHHHH----hc-ccc-hHHHHHHHHHHHHHH
Confidence            3679999999999999999999975   3788888555555    333333333    11 122 233444556668888


Q ss_pred             HHHHHHHHHHHhcc-cCCccceeecccchhHHHHHHHHHHhhccccccccCcccee----ehHhHHHHhHhhhh
Q 017167           95 GITANQGFYLLGLE-NTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKV----VGTLFCVAGATVIT  163 (376)
Q Consensus        95 ~~~~~~~~~~~al~-~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~----igi~l~~~Gv~li~  163 (376)
                      . .+++.+|+.+.+ +.+++.+.++.+..|+.+.+.+++++||+.+++      ++    +|.++.+.|+.++.
T Consensus       221 ~-~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~------~~~~~~iG~~lIi~~~~l~~  287 (290)
T TIGR00776       221 W-GIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKR------EMIAISVGIILIIIAANILG  287 (290)
T ss_pred             H-HHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcc------eeehhHHHHHHHHHHHHHHh
Confidence            4 899999999999 999999999999999999999999999999994      89    99999999999885

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.40  E-value=3.8e-06  Score=78.47  Aligned_cols=133  Identities=16%  Similarity=0.212  Sum_probs=106.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHH-HHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHH
Q 017167           20 LQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPV-YRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITA   98 (376)
Q Consensus        20 ~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~-~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   98 (376)
                      ..|..+.+.+++.|+.+.+..|... + .++..... +..........+..  ..... .....+.+......|+++..+
T Consensus       153 ~~g~~~~l~a~~~~a~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~g~~~~~i  227 (292)
T COG0697         153 LLGLLLALAAALLWALYTALVKRLS-R-LGPVTLALLLQLLLALLLLLLFF--LSGFG-APILSRAWLLLLYLGVFSTGL  227 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc-C-CChHHHHHHHHHHHHHHHHHHHH--hcccc-ccCCHHHHHHHHHHHHHHHHH
Confidence            5799999999999999999999876 3 66666665 33332222222222  11111 345678889999999998778


Q ss_pred             HHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhh
Q 017167           99 NQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT  163 (376)
Q Consensus        99 ~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~  163 (376)
                      ++.++++++++.+++..+.+..+.|+++.++++++++|+++.      .+++|+.+.+.|+.+..
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~------~~~~G~~li~~g~~l~~  286 (292)
T COG0697         228 AYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSP------AQLLGAALVVLGVLLAS  286 (292)
T ss_pred             HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcH------HHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999      59999999999999886

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=98.38  E-value=4.4e-06  Score=79.85  Aligned_cols=141  Identities=14%  Similarity=0.065  Sum_probs=112.5

Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCC--CCCHHHHHHHHHHHHH
Q 017167           17 PEKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERP--AMTLNFALQFILLALV   94 (376)
Q Consensus        17 ~~~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~   94 (376)
                      .+..+|-++++.+++++|.+++.-+...++ .++.++...-.+++.++..+.....++++..  .++.+.+..++.-++ 
T Consensus       164 ~~~i~GDll~l~~a~lya~~nV~~E~~v~~-~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~-  241 (334)
T PF06027_consen  164 SNPILGDLLALLGAILYAVSNVLEEKLVKK-APRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYAL-  241 (334)
T ss_pred             CccchhHHHHHHHHHHHHHHHHHHHHhccc-CCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHH-
Confidence            457889999999999999999999999985 8999999988899988888877766655433  334444333333333 


Q ss_pred             HHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhc
Q 017167           95 GITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLY  165 (376)
Q Consensus        95 ~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~  165 (376)
                      +....+.+.-..+++.+++...+=.-+..+++.+++.+++|+++++      ..++|.++.++|.++....
T Consensus       242 ~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~------ly~~af~lIiiG~vvy~~~  306 (334)
T PF06027_consen  242 CLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSW------LYILAFALIIIGFVVYNLA  306 (334)
T ss_pred             HHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccH------HHHHHHHHHHHHhheEEcc
Confidence            3345566667778899998888888889999999999999999999      7999999999999998743

Some of the sequences in this family are annotated as putative membrane proteins.

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=98.33  E-value=6e-08  Score=86.38  Aligned_cols=276  Identities=13%  Similarity=0.092  Sum_probs=183.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017167           22 LHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQG  101 (376)
Q Consensus        22 g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  101 (376)
                      .++.+++-++.||..+......   |-+|.+-+..--+-+.++...+.++    ..|..+.+.+..-++.|.+. .+++.
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT~GALifaiiv~~~----~~p~~T~~~~iv~~isG~~W-s~GQ~   74 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKF---GGKPYQQTLGTTLGALIFAIIVFLF----VSPELTLTIFIVGFISGAFW-SFGQA   74 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeec---CCChhHhhhhccHHHHHHHHHHhee----ecCccchhhHHHHHHhhhHh-hhhhh
Confidence            5678899999999998776542   4556665444444444433333333    23456777777777888886 79999


Q ss_pred             HHHHhcccCCccceeeccc-chhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCCCCCC
Q 017167          102 FYLLGLENTSPTFASAIQN-SVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQI  180 (376)
Q Consensus       102 ~~~~al~~~~~~~a~ii~~-~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~~~~~  180 (376)
                      ..+.|+++.+++++.++.. ++-+-+.+++.+.++|=-+.-++.  ...+++++.++|+.+-+. +.+.        |+ 
T Consensus        75 ~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~I--lG~iAliliviG~~lTs~-~~~~--------nk-  142 (288)
T COG4975          75 NQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQII--LGFIALILIVIGIYLTSK-QDRN--------NK-  142 (288)
T ss_pred             hhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHH--HHHHHHHHHHHhheEeee-eccc--------cc-
Confidence            9999999999999999865 888889999999999865552111  233455666666665542 1111        11 


Q ss_pred             CCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCccc
Q 017167          181 QPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDA  260 (376)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (376)
                      +++             +.++..+|....+.+.+.|-.|.+..+...-+.-+...-.+.-++.+++..   .. .. .   
T Consensus       143 ~~~-------------~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~v~g~saiLPqAiGMv~~ali~---~~-~~-~---  201 (288)
T COG4975         143 EEE-------------NPSNLKKGIVILLISTLGYVGYVVLFQLFDVDGLSAILPQAIGMVIGALIL---GF-FK-M---  201 (288)
T ss_pred             ccc-------------ChHhhhhheeeeeeeccceeeeEeeeccccccchhhhhHHHHHHHHHHHHH---hh-cc-c---
Confidence            111             345577899999999999999999865542110022222333333333221   11 11 1   


Q ss_pred             ccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccc----cchhhhhhh
Q 017167          261 WIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGY----VPATSPARS  336 (376)
Q Consensus       261 ~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~----iG~~lI~~g  336 (376)
                       +....+..+.-...|+. -+++...+..+.++.+....=.+..+..+++.+-+.++++|+=|..++    +|..+++.|
T Consensus       202 -~~~~~K~t~~nii~G~~-Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvg  279 (288)
T COG4975         202 -EKRFNKYTWLNIIPGLI-WAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVG  279 (288)
T ss_pred             -ccchHHHHHHHHhhHHH-HHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHH
Confidence             11123444455666776 788889999999999998888888999999999999999999887765    567777666


Q ss_pred             hhhc
Q 017167          337 ILLP  340 (376)
Q Consensus       337 i~l~  340 (376)
                      ..+.
T Consensus       280 ai~l  283 (288)
T COG4975         280 AILL  283 (288)
T ss_pred             hhhh
Confidence            5553

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.29  E-value=2e-06  Score=69.22  Aligned_cols=67  Identities=9%  Similarity=0.028  Sum_probs=62.2

Q ss_pred             HHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhccc
Q 017167          276 GVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPNR  342 (376)
Q Consensus       276 g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~~  342 (376)
                      ++++.++++.++.+++++.+.+++-.+..+.++++.+.+++++||++++.+++|.++++.|+++..+
T Consensus        43 ~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~  109 (111)
T PRK15051         43 ALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS  109 (111)
T ss_pred             HHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            4456788999999999999999999999999999999999999999999999999999999988754

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.21  E-value=5.8e-06  Score=75.95  Aligned_cols=138  Identities=11%  Similarity=0.189  Sum_probs=113.9

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCccccc-ccCCchhHHHHHHHHH
Q 017167          200 NWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWI-FHNGGEVFSILYAGVV  278 (376)
Q Consensus       200 ~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~g~~  278 (376)
                      +...|+++++.|-+.|+.--.+.|. .++. ++.++..++.+.+............+..+.++ ..++..+......+..
T Consensus         4 ~~~~Gil~~l~Ay~lwG~lp~y~kl-l~~~-~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l   81 (293)
T COG2962           4 DSRKGILLALLAYLLWGLLPLYFKL-LEPL-PATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL   81 (293)
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHH-HccC-CHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH
Confidence            3468999999999999998887766 4566 48899999999998887776665543222222 2345667777777776


Q ss_pred             HHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhc
Q 017167          279 ASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLP  340 (376)
Q Consensus       279 ~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~  340 (376)
                       .......+.++.++....++|+-.+++|.+.+++|.++++|+++..|++...+..+|+...
T Consensus        82 -i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~  142 (293)
T COG2962          82 -IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQ  142 (293)
T ss_pred             -HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence             7888999999999999999999999999999999999999999999999999999998764

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.18  E-value=1e-05  Score=65.12  Aligned_cols=69  Identities=22%  Similarity=0.199  Sum_probs=62.6

Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhh
Q 017167           89 ILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT  163 (376)
Q Consensus        89 ~~~g~~~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~  163 (376)
                      ...++++..++..++..++++.|.+.+..+.++.++++.+++++++|||+++      .+++|+.+.++|++++.
T Consensus        40 ~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~------~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         40 LGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSP------RHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCH------HHHHHHHHHHHHHHHHh
Confidence            3444466778999999999999999999999999999999999999999999      59999999999999885

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=98.18  E-value=9.7e-06  Score=72.82  Aligned_cols=136  Identities=13%  Similarity=0.063  Sum_probs=116.8

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHH
Q 017167           19 KLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITA   98 (376)
Q Consensus        19 ~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   98 (376)
                      +..|..+++.+..+|+.+.+..|..-+. .+...-+..-+.+++++.+|+-.......  -.++.-....+..|+++..+
T Consensus       146 Dp~Gv~~Al~AG~~Wa~YIv~G~r~g~~-~~g~~g~a~gm~vAaviv~Pig~~~ag~~--l~~p~ll~laLgvavlSSal  222 (292)
T COG5006         146 DPVGVALALGAGACWALYIVLGQRAGRA-EHGTAGVAVGMLVAALIVLPIGAAQAGPA--LFSPSLLPLALGVAVLSSAL  222 (292)
T ss_pred             CHHHHHHHHHHhHHHHHHHHHcchhccc-CCCchHHHHHHHHHHHHHhhhhhhhcchh--hcChHHHHHHHHHHHHhccc
Confidence            4579999999999999999999998753 66677788899999999999986543322  24566677788899999999


Q ss_pred             HHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhh
Q 017167           99 NQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT  163 (376)
Q Consensus        99 ~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~  163 (376)
                      .+.+-..++++.|...-+.+.++.|.+.++.++++++|+++.      .||+++...+.+..-.+
T Consensus       223 PYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~------~qwlaI~~ViaAsaG~~  281 (292)
T COG5006         223 PYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTL------IQWLAIAAVIAASAGST  281 (292)
T ss_pred             chHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCH------HHHHHHHHHHHHHhccc
Confidence            999999999999999999999999999999999999999999      59999998888777554

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=98.17  E-value=4.5e-06  Score=73.45  Aligned_cols=269  Identities=12%  Similarity=0.127  Sum_probs=178.9

Q ss_pred             HHHHHHHHHhc-CCC-chHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcc
Q 017167           36 FHVVSRAALNM-GIS-KLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFYLLGLENTSPT  113 (376)
Q Consensus        36 ~~~~~k~~~~~-~~~-~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~  113 (376)
                      +.+..|+..+. |++ -+..++.+.+.+.+-+..+-+.+.. +.+..+.+.|..   ..++. ..-...---+++|++..
T Consensus        21 mTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~-~fR~t~aK~Wfp---iSfLL-v~MIyt~SKsLqyL~vp   95 (309)
T COG5070          21 MTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLV-EFRLTKAKKWFP---ISFLL-VVMIYTSSKSLQYLAVP   95 (309)
T ss_pred             HHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHh-heehhhhhhhcC---HHHHH-HHHHHhcccceeeeeee
Confidence            44556666653 343 3456677777766655544433221 222222233322   22221 12222334679999999


Q ss_pred             ceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCCCCCCCCCCcchhhhccc
Q 017167          114 FASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSL  193 (376)
Q Consensus       114 ~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (376)
                      .-++..++..+..+....+++|.|++-      .+..+.++.+..-+.-.  .++...                    +.
T Consensus        96 iYTiFKNltII~iAygEvl~Fgg~vts------l~l~SFilMvlSS~va~--w~D~q~--------------------~~  147 (309)
T COG5070          96 IYTIFKNLTIILIAYGEVLFFGGRVTS------LELLSFILMVLSSVVAT--WGDQQA--------------------SA  147 (309)
T ss_pred             HHHHhccceeehhHhhHHHHhcCccch------hhHHHHHHHHHHHHHhc--cchhhH--------------------HH
Confidence            999999999999999999999999988      67777777666655543  122100                    00


Q ss_pred             cCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCC-CcchhHHHHHHHHHHHHHHHHHHhhc-Ccccccc-cCCchhH
Q 017167          194 GDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYP-ARLSVTAYTCFFGLIQFMIIAAIFER-NLDAWIF-HNGGEVF  270 (376)
Q Consensus       194 ~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~  270 (376)
                      -  .....+.|++++...++.-+.+-...|+..+-.+ ......+|..+.+...++...+++|+ ....... .+.....
T Consensus       148 ~--~~~~lN~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~  225 (309)
T COG5070         148 F--KAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLM  225 (309)
T ss_pred             H--HhcccCCceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHH
Confidence            0  1123567999999999999999998887665332 46778899999999888888887653 2221111 1223455


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhc
Q 017167          271 SILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLP  340 (376)
Q Consensus       271 ~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~  340 (376)
                      ++...|+. +..--++-.++++-.+.+..+++..++-.-..+.|.+++||+.+...+....+-..+..++
T Consensus       226 am~ISgl~-svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iY  294 (309)
T COG5070         226 AMFISGLC-SVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIY  294 (309)
T ss_pred             HHHHHHHH-HhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHH
Confidence            67777776 4444556778999999999999999999999999999999999998888777765544443

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=98.07  E-value=7.6e-07  Score=80.34  Aligned_cols=136  Identities=12%  Similarity=0.063  Sum_probs=100.2

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCcccccccCCchhHHHHHHHHHH
Q 017167          200 NWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVA  279 (376)
Q Consensus       200 ~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~  279 (376)
                      ..++|..+.-++ ..+...+++.++..+..  |.......++.-.+...|-.+......  +.  +...--++++=|+. 
T Consensus        35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~e~~--p~e~a~~r~l~~mlit~pcliy~~~~v--~g--p~g~R~~LiLRg~m-  106 (346)
T KOG4510|consen   35 KPNLGLLLLTVS-YFFNSCMVVSTKVLEND--PMELASFRLLVRMLITYPCLIYYMQPV--IG--PEGKRKWLILRGFM-  106 (346)
T ss_pred             CCccCceehhhH-HHHhhHHHhhhhhhccC--hhHhhhhhhhhehhhhheEEEEEeeee--ec--CCCcEEEEEeehhh-
Confidence            456888888888 88888899988887664  566666665555555444444322221  11  11111224445565 


Q ss_pred             HHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhcccc
Q 017167          280 SGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPNRW  343 (376)
Q Consensus       280 ~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~~~  343 (376)
                      +..+..+.++++++.+-+.+.++..++|+++.+++|++++|+.+....+|..+.+.|+++..|.
T Consensus       107 G~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRP  170 (346)
T KOG4510|consen  107 GFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRP  170 (346)
T ss_pred             hhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecC
Confidence            4455666779999999999999999999999999999999999999999999999999998765

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.06  E-value=2.8e-05  Score=64.24  Aligned_cols=117  Identities=21%  Similarity=0.162  Sum_probs=90.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017167           22 LHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQG  101 (376)
Q Consensus        22 g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  101 (376)
                      ++++++++.++-+...++.|...++ .+....... . .    ..... .           ......+..|++...++..
T Consensus         3 ~~~~i~~sv~l~~~gQl~~K~g~~~-~g~~~~~~~-~-~----~~~~~-~-----------~~p~~~i~lgl~~~~la~~   63 (129)
T PRK02971          3 GYLWGLASVLLASVAQLSLKWGMSR-LPLLSHAWD-F-I----AALLA-F-----------GLALRAVLLGLAGYALSML   63 (129)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhh-CCCccchhH-H-H----HHHHH-H-----------hccHHHHHHHHHHHHHHHH
Confidence            6788889999999999999999875 554432221 1 0    00000 0           0002367788888889999


Q ss_pred             HHHHhcccCCccceeecccchhHHHHHHHHH--HhhccccccccCccceeehHhHHHHhHhhhh
Q 017167          102 FYLLGLENTSPTFASAIQNSVPAITFLMAAI--FRIEKVRLDRKDGIAKVVGTLFCVAGATVIT  163 (376)
Q Consensus       102 ~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l--~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~  163 (376)
                      ++.+++++.|++.+..+.+..+.++.+.++.  ++||++++      .+++|+++.++|++++.
T Consensus        64 ~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~------~~~iGi~lIi~GV~lv~  121 (129)
T PRK02971         64 CWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSL------KKTLGVACIMLGVWLIN  121 (129)
T ss_pred             HHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCH------HHHHHHHHHHHHHHHhc
Confidence            9999999999999999999998888888884  89999999      59999999999999986

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.93  E-value=5.8e-05  Score=69.68  Aligned_cols=134  Identities=21%  Similarity=0.199  Sum_probs=95.9

Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHH
Q 017167           17 PEKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGI   96 (376)
Q Consensus        17 ~~~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   96 (376)
                      .+..+++..++.+++.|..+..+.|..   +.+++...+-..+--.+....+..+. ++   +...|..++-++.|++. 
T Consensus       134 ~~~~kgi~~Ll~stigy~~Y~~~~~~~---~~~~~~~~lPqaiGm~i~a~i~~~~~-~~---~~~~k~~~~nil~G~~w-  205 (269)
T PF06800_consen  134 SNMKKGILALLISTIGYWIYSVIPKAF---HVSGWSAFLPQAIGMLIGAFIFNLFS-KK---PFFEKKSWKNILTGLIW-  205 (269)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHhc---CCChhHhHHHHHHHHHHHHHHHhhcc-cc---cccccchHHhhHHHHHH-
Confidence            456789999999999999999998873   47887766655444444334443332 11   12223345567777774 


Q ss_pred             HHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHh
Q 017167           97 TANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGAT  160 (376)
Q Consensus        97 ~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~  160 (376)
                      .+++.+++.+.+..+.+.+-.+..+..+...+-+.+++||+-+.|+.  ....+|.++.++|.+
T Consensus       206 ~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~--~~~~~G~~Liv~G~i  267 (269)
T PF06800_consen  206 GIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEM--IYTLIGLILIVIGAI  267 (269)
T ss_pred             HHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhH--HHHHHHHHHHHHhhh
Confidence            78999999999999999999999999999999999999999777421  123345555555544

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=97.81  E-value=4.1e-05  Score=71.25  Aligned_cols=275  Identities=15%  Similarity=0.118  Sum_probs=163.2

Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHH
Q 017167           17 PEKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGI   96 (376)
Q Consensus        17 ~~~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   96 (376)
                      .+...|.++.+.+.+..|.+..+-|+...+ ...   ..               .+. ++.+..-.++  +..+.|.+.+
T Consensus        17 ~d~~~G~~LaissS~~Ig~sfilkKkgl~r-~~~---~~---------------~ra-~~gg~~yl~~--~~Ww~G~ltm   74 (335)
T KOG2922|consen   17 SDNIIGLVLAISSSIFIGSSFILKKKGLKR-AGA---SG---------------LRA-GEGGYGYLKE--PLWWAGMLTM   74 (335)
T ss_pred             cCceeeeeehhhccEEEeeehhhhHHHHHH-Hhh---hc---------------ccc-cCCCcchhhh--HHHHHHHHHH
Confidence            345778999999999999999999987764 111   00               111 1111111122  3445677778


Q ss_pred             HHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccCCcccCCCCC
Q 017167           97 TANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPP  176 (376)
Q Consensus        97 ~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~~~~~  176 (376)
                      .++...-|.|+.+.|++..+++..+.-++.++++..+++||+++      ...+|+.++++|-.++.. ..+.++.    
T Consensus        75 ~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~------~g~lGc~l~v~Gst~iV~-haP~e~~----  143 (335)
T KOG2922|consen   75 IVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNL------LGILGCVLCVVGSTTIVI-HAPKEQE----  143 (335)
T ss_pred             HHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHH------hhhhheeEEecccEEEEE-ecCcccc----
Confidence            88999999999999999999999999999999999999999999      699999999999999974 3332211    


Q ss_pred             CCCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHH--------
Q 017167          177 LNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFM--------  248 (376)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------  248 (376)
                           ..   +.-..... ..+..+..-..+.++..+   +-....+   .++ ....+..|..+.+.+..+        
T Consensus       144 -----i~---t~~el~~~-~~~~~Fliy~~~iil~~~---il~~~~~---p~~-g~tnilvyi~i~s~iGS~tV~svKal  207 (335)
T KOG2922|consen  144 -----IE---SVEEVWEL-ATEPGFLVYVIIIILIVL---ILIFFYA---PRY-GQTNILVYIGICSLIGSLTVMSVKAL  207 (335)
T ss_pred             -----cc---cHHHHHHH-hcCccHHHHHHHHHHHHH---HHheeec---ccc-cccceeehhhHhhhhcceeeeeHHHH
Confidence                 00   00000000 011112111111111111   1111111   122 233444444444433211        


Q ss_pred             HHH--HHhhcCcccccccCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchh-HHHHHHHHHHHHhCCccc--
Q 017167          249 IIA--AIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPV-QTLVVAIMASFALGEEFY--  323 (376)
Q Consensus       249 ~~~--~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l-~pv~a~l~~~l~l~e~~~--  323 (376)
                      ..+  ....+. .+.  ..+.-|..++.... +...-....++|++.-+++.++++.+. -..++++.+.++++|--.  
T Consensus       208 g~aiklt~~g~-~ql--~~~~ty~~~l~~~~-~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~  283 (335)
T KOG2922|consen  208 GIAIKLTFSGN-NQL--FYPLTWIFLLVVAT-CVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQD  283 (335)
T ss_pred             HHHHHHHhcCC-ccc--ccHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            111  111111 121  12333444444333 345555667899999999888877664 455667778888877632  


Q ss_pred             ----cccccchhhhhhhhhhccccc
Q 017167          324 ----LGGYVPATSPARSILLPNRWM  344 (376)
Q Consensus       324 ----~~~~iG~~lI~~gi~l~~~~~  344 (376)
                          ....+|...++.|+++.++.+
T Consensus       284 ~~~i~~~~~Gf~ti~~G~flL~~~k  308 (335)
T KOG2922|consen  284 ALDIAGELCGFVTIFLGIFLLHRTK  308 (335)
T ss_pred             HHHHHHHHHhHHHhhheeeEeeeec
Confidence                235689999999999987533

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.69  E-value=0.00048  Score=65.50  Aligned_cols=138  Identities=14%  Similarity=0.167  Sum_probs=112.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCchHHHHHHHHHHHHHHHHHHHh--hhh-ccC---CCCCHHHHHHHHHHH
Q 017167           20 LQLHLAMVALQFGYAGFHVVSRAALNM-GISKLVFPVYRNIIAFLLLLPFAYF--LEK-KER---PAMTLNFALQFILLA   92 (376)
Q Consensus        20 ~~g~~~~lla~~~~g~~~~~~k~~~~~-~~~~~~~~~~r~~~a~l~l~~~~~~--~~~-~~~---~~~~~~~~~~~~~~g   92 (376)
                      ..|+.+++++.++-|.....-+...++ +.++.+..++...++.+...+....  .+. .+.   ....+..+..++...
T Consensus       153 ~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s  232 (303)
T PF08449_consen  153 ALGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFS  232 (303)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHH
Confidence            349999999999999999999998864 6889999999999999888877766  211 110   011223445556666


Q ss_pred             HHHHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhh
Q 017167           93 LVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITL  164 (376)
Q Consensus        93 ~~~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~  164 (376)
                      +.+ .+++.+.+.-.++.++...+++..+--+++.+++.+++++++++      .+|+|+++.+.|..+-..
T Consensus       233 ~~~-~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~------~~~~G~~lv~~g~~~~~~  297 (303)
T PF08449_consen  233 LTG-ALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSP------LQWIGIVLVFAGIFLYSY  297 (303)
T ss_pred             HHH-HHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCCh------HHHHHHHHhHHHHHHHHH
Confidence            665 57777888889999999999999999999999999999999999      699999999999998763

; GO: 0055085 transmembrane transport

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.59  E-value=0.00056  Score=57.20  Aligned_cols=132  Identities=14%  Similarity=0.102  Sum_probs=100.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCcccccccCCchhHHHHHHHHHHHHHH
Q 017167          204 GCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIA  283 (376)
Q Consensus       204 G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~  283 (376)
                      ..++++.++..-++...++.++.++..++....+..+..|.+.+.....+.++.  .........|+..+ .|++ ....
T Consensus         2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w~~l-GG~l-G~~~   77 (138)
T PF04657_consen    2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWWAYL-GGLL-GVFF   77 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChHHhc-cHHH-HHHH
Confidence            357889999999999999999888875689999999999999988877766543  22222222333333 5555 7777


Q ss_pred             HHHHHHHHhcCCceeee-ecchhHHHHHHHHHHH----HhCCccccccccchhhhhhhhhh
Q 017167          284 FAVQIWCIDRGGPVFVA-VYQPVQTLVVAIMASF----ALGEEFYLGGYVPATSPARSILL  339 (376)
Q Consensus       284 ~~l~~~al~~~~a~~~s-~~~~l~pv~a~l~~~l----~l~e~~~~~~~iG~~lI~~gi~l  339 (376)
                      ..+.....++.+++... ....-|.+.++++|.+    .-++++++.+++|..+++.|+++
T Consensus        78 V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   78 VLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            88888999999987665 4455677888888886    34566999999999999999875

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.45  E-value=0.00042  Score=56.27  Aligned_cols=69  Identities=10%  Similarity=0.122  Sum_probs=59.3

Q ss_pred             HHHHHHHHHHHHHHHHhcCCceeeeec-chhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhccccc
Q 017167          276 GVVASGIAFAVQIWCIDRGGPVFVAVY-QPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPNRWM  344 (376)
Q Consensus       276 g~~~~~~~~~l~~~al~~~~a~~~s~~-~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~~~~  344 (376)
                      .+.+.+++++++..++|+.+.+.+=.+ ..+..+.+.+.+++++||++++.+++|.++|++|++..+...
T Consensus        36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            344578899999999999998766544 568889999999999999999999999999999999987533

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.28  E-value=0.00042  Score=55.50  Aligned_cols=68  Identities=9%  Similarity=0.076  Sum_probs=58.3

Q ss_pred             HHHHHHHHHHHHHHHhcCCceeeee-cchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhccccc
Q 017167          277 VVASGIAFAVQIWCIDRGGPVFVAV-YQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPNRWM  344 (376)
Q Consensus       277 ~~~~~~~~~l~~~al~~~~a~~~s~-~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~~~~  344 (376)
                      +++.++++.++..++|+.+.+.+=. ...+..+.+.+.+++++||++++.+++|..+|+.|+++.+...
T Consensus        37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            4457888999999999998866543 3667888999999999999999999999999999999987544

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=97.21  E-value=0.00088  Score=53.61  Aligned_cols=110  Identities=10%  Similarity=0.135  Sum_probs=76.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017167           27 VALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFYLLG  106 (376)
Q Consensus        27 lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a  106 (376)
                      ++.+++||..+++.|...+. .++..-.. |..-... .   . .        .+++..     ..+.....+...|++.
T Consensus         2 l~Vg~~WG~Tnpfik~g~~~-~~~~~~~~-~~~~~~~-~---L-l--------~n~~y~-----ipf~lNq~GSv~f~~~   61 (113)
T PF10639_consen    2 LLVGILWGCTNPFIKRGSSG-LEKVKASL-QLLQEIK-F---L-L--------LNPKYI-----IPFLLNQSGSVLFFLL   61 (113)
T ss_pred             eeehHHhcCchHHHHHHHhh-cCCccchH-HHHHHHH-H---H-H--------HhHHHH-----HHHHHHHHHHHHHHHH
Confidence            35678999999999999873 55544331 2111111 1   0 0        112221     1333345677889999


Q ss_pred             cccCCccceeec-ccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhh
Q 017167          107 LENTSPTFASAI-QNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVI  162 (376)
Q Consensus       107 l~~~~~~~a~ii-~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li  162 (376)
                      +.+.+.+.+.++ +++.=++|++.++++.+|..++      ..++|+.+.+.|+.+.
T Consensus        62 L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~------~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   62 LGSADLSLAVPIANSLAFVFTALTGWLLGEEVISR------RTWLGMALILAGVALC  112 (113)
T ss_pred             HhcCCceeeehHHhHHHHHHHHHHHHHhcCcccch------hHHHHHHHHHcCeeee
Confidence            999999999999 5788899999998887777777      4899999999998754

Many members are annotated as potential transmembrane proteins.

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.14  E-value=0.0011  Score=62.93  Aligned_cols=118  Identities=14%  Similarity=0.089  Sum_probs=88.4

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCcccccccCCchhHHHHHHHHH
Q 017167          199 KNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVV  278 (376)
Q Consensus       199 ~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~  278 (376)
                      .++.+|..+++.++++.+.+..++|+..++.++ .....-..        ....        +  .++. |    +.|..
T Consensus         3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~-~~~~~~~~--------~~~~--------l--~~~~-W----~~G~~   58 (300)
T PF05653_consen    3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPR-GSLRAGSG--------GRSY--------L--RRPL-W----WIGLL   58 (300)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccccccch--------hhHH--------H--hhHH-H----HHHHH
Confidence            457899999999999999999999998766532 11000000        0000        0  0111 1    12333


Q ss_pred             HHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhc
Q 017167          279 ASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLP  340 (376)
Q Consensus       279 ~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~  340 (376)
                      ..+++..+.+.++...+++.++++..+..+++.+++..++||+++..+++|.++++.|..+.
T Consensus        59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~li  120 (300)
T PF05653_consen   59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLI  120 (300)
T ss_pred             HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheee
Confidence            35667778889999999999999999999999999999999999999999999999998774

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.09  E-value=0.0025  Score=50.88  Aligned_cols=63  Identities=10%  Similarity=0.067  Sum_probs=55.6

Q ss_pred             HHHHHHHHHHHHHhcCCceee-eecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhcc
Q 017167          279 ASGIAFAVQIWCIDRGGPVFV-AVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPN  341 (376)
Q Consensus       279 ~~~~~~~l~~~al~~~~a~~~-s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~  341 (376)
                      +..+++++...++|+.+.+.+ ++...+..+.+.+.+++++||++++.+++|.++|+.|++..+
T Consensus        44 ~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         44 AVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            468899999999999987544 566678889999999999999999999999999999999864

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.05  E-value=0.015  Score=55.95  Aligned_cols=146  Identities=15%  Similarity=0.097  Sum_probs=96.2

Q ss_pred             ccchHHHHHHHHHHHHHHHHH-------HHHHHHHhcCCCchHHHHHHHH---HHHHH-HHHHHHhh--hhccC-----C
Q 017167           17 PEKLQLHLAMVALQFGYAGFH-------VVSRAALNMGISKLVFPVYRNI---IAFLL-LLPFAYFL--EKKER-----P   78 (376)
Q Consensus        17 ~~~~~g~~~~lla~~~~g~~~-------~~~k~~~~~~~~~~~~~~~r~~---~a~l~-l~~~~~~~--~~~~~-----~   78 (376)
                      .+..+|+..++++.+.++...       +..+.+.+.+.++.....-.+.   ++..+ ...++...  ++++.     .
T Consensus       170 ~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~  249 (345)
T PRK13499        170 FNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADF  249 (345)
T ss_pred             cchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhc
Confidence            456889999999999999999       6666655556777766655555   33333 33333322  11111     1


Q ss_pred             CCC----HHHHHHHHHHHHHHHHHHHHHHHHhcccCCccceee---cccchh-HHHHHHHHHHhhccccccccCccceee
Q 017167           79 AMT----LNFALQFILLALVGITANQGFYLLGLENTSPTFASA---IQNSVP-AITFLMAAIFRIEKVRLDRKDGIAKVV  150 (376)
Q Consensus        79 ~~~----~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~i---i~~~~P-l~~~lla~l~l~e~~~~~~~~~~~~~i  150 (376)
                      +.+    .+.....++.|+.- .+++.+|..+-+..+.+.+.+   +....+ ++..+-+. ++||+-+..||.-+.-++
T Consensus       250 ~~~~~~~~~n~l~~~l~G~~W-~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~  327 (345)
T PRK13499        250 SLAKPLLITNVLLSALAGVMW-YLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSL  327 (345)
T ss_pred             cccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHH
Confidence            112    22222235555554 688888999888887766665   664444 55555555 699998876777778899


Q ss_pred             hHhHHHHhHhhhhh
Q 017167          151 GTLFCVAGATVITL  164 (376)
Q Consensus       151 gi~l~~~Gv~li~~  164 (376)
                      |+++.++|..++.+
T Consensus       328 G~vliI~g~~lig~  341 (345)
T PRK13499        328 GCVVIILAANIVGL  341 (345)
T ss_pred             HHHHHHHHHHHHhh
Confidence            99999999999864

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.02  E-value=0.0042  Score=51.95  Aligned_cols=130  Identities=12%  Similarity=0.086  Sum_probs=95.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017167           23 HLAMVALQFGYAGFHVVSRAALNMGIS-KLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQG  101 (376)
Q Consensus        23 ~~~~lla~~~~g~~~~~~k~~~~~~~~-~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  101 (376)
                      .++.+++..+-+....+...+.++ .+ |+...++.+..+++.+..+....++++....+ +..+|...-|+++ ...-.
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~-~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~-~~p~w~~lGG~lG-~~~V~   79 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKA-LGSPLVASFISFGVGFILLLIILLITGRPSLASLS-SVPWWAYLGGLLG-VFFVL   79 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-hCccHHHHHHHHHHHHHHHHHHHHHhcccccchhc-cCChHHhccHHHH-HHHHH
Confidence            466778888888888888887775 65 99999999999999998888876654333222 2234555577777 57788


Q ss_pred             HHHHhcccCCccceeeccc-chhHHHHHHHHH----HhhccccccccCccceeehHhHHHHhHhh
Q 017167          102 FYLLGLENTSPTFASAIQN-SVPAITFLMAAI----FRIEKVRLDRKDGIAKVVGTLFCVAGATV  161 (376)
Q Consensus       102 ~~~~al~~~~~~~a~ii~~-~~Pl~~~lla~l----~l~e~~~~~~~~~~~~~igi~l~~~Gv~l  161 (376)
                      +..+.+++++++.+..+.- -+-+...++..+    .-++|+++      .+.+|+.+.++|+.+
T Consensus        80 ~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~------~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   80 SNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSL------RRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCH------HHHHHHHHHHHHHhC
Confidence            8889999999988886655 455555666663    34456666      699999999999864

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.00  E-value=0.0042  Score=52.15  Aligned_cols=140  Identities=14%  Similarity=0.109  Sum_probs=98.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCcccccccCCchhHHHHHHHHHHHH
Q 017167          202 TLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASG  281 (376)
Q Consensus       202 ~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~  281 (376)
                      .+..++++.++.+-.+..-...++.+...+|....+..+..|++.+..+..+.+ ...++.......||. ...|++ .+
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~-~~~~~a~~~~~pwW~-~~GG~l-Ga   80 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQ-GHPGLAAVASAPWWA-WIGGLL-GA   80 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhc-CCCchhhccCCchHH-HHccch-hh
Confidence            467788999999999999999998888767888889999999988888777643 333333222223333 333443 33


Q ss_pred             HHHHHHHHHHhcCCc-eeeeecchhHHHHHHHHHHHHhC----Cccccccccchhhhhhhhhhccccc
Q 017167          282 IAFAVQIWCIDRGGP-VFVAVYQPVQTLVVAIMASFALG----EEFYLGGYVPATSPARSILLPNRWM  344 (376)
Q Consensus       282 ~~~~l~~~al~~~~a-~~~s~~~~l~pv~a~l~~~l~l~----e~~~~~~~iG~~lI~~gi~l~~~~~  344 (376)
                      +-...-....++.++ ........-|-+.++++|.+=+.    .+++...++|.+++++|+++.++++
T Consensus        81 ~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~~  148 (150)
T COG3238          81 IFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRFG  148 (150)
T ss_pred             hhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcccc
Confidence            333334455666665 44556667788888888876554    5599999999999999977766554

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=96.99  E-value=0.0035  Score=59.70  Aligned_cols=141  Identities=13%  Similarity=0.169  Sum_probs=113.2

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCchHHHHHHHHHHHHHHHHHHHhhhh---ccCCCCCHHHHHHHHHH
Q 017167           18 EKLQLHLAMVALQFGYAGFHVVSRAALNM---GISKLVFPVYRNIIAFLLLLPFAYFLEK---KERPAMTLNFALQFILL   91 (376)
Q Consensus        18 ~~~~g~~~~lla~~~~g~~~~~~k~~~~~---~~~~~~~~~~r~~~a~l~l~~~~~~~~~---~~~~~~~~~~~~~~~~~   91 (376)
                      +...|-++.++++++||.+.++.|.-.++   ..+-..+-.+-.++..++++|..+....   .+..-++..+...++..
T Consensus       244 ~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~  323 (416)
T KOG2765|consen  244 RPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFN  323 (416)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHh
Confidence            45789999999999999999999987754   2566666667777778888876665432   22333445566777888


Q ss_pred             HHHHHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhh
Q 017167           92 ALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITL  164 (376)
Q Consensus        92 g~~~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~  164 (376)
                      ++++..++..+|..|.-.+++-.+++-+..+-..+.+...++-+.++++      ..++|.+..++|-+++.+
T Consensus       324 ~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~------~~iiGsi~Ifv~Fv~vn~  390 (416)
T KOG2765|consen  324 NLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSA------LYIIGSIPIFVGFVIVNI  390 (416)
T ss_pred             hHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCH------HHHHHHHHHHHHHhheec
Confidence            9999999999999999999999999888888888888888887777777      799999999999998864

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=96.83  E-value=0.0017  Score=59.68  Aligned_cols=103  Identities=13%  Similarity=0.073  Sum_probs=80.6

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhcccccc
Q 017167          266 GGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPNRWMS  345 (376)
Q Consensus       266 ~~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~~~~~  345 (376)
                      ..+...+..-+++ ..+...+.+.++++.+|+...++..+..+++.++++++++++.+..||++..+.+.|+.+.+....
T Consensus        14 ~~~~~~~~vPA~l-Y~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~   92 (244)
T PF04142_consen   14 PKDTLKLAVPALL-YAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSS   92 (244)
T ss_pred             HHHHHHHHHHHHH-HHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCc
Confidence            3445555666665 788889999999999999999999999999999999999999999999999999999999864322


Q ss_pred             cc---------------chhhHHHHHHhHhhhcccccee
Q 017167          346 TC---------------MLSFWIQMFVCLTAICSGPQFT  369 (376)
Q Consensus       346 ~~---------------~~~~~~~~~~~~~~~~~~~~~~  369 (376)
                      ..               +....+=...+.++.|||=+.-
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agV  131 (244)
T PF04142_consen   93 QSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGV  131 (244)
T ss_pred             cccccccccccccccccchhHhHHHHHHHHHHHHHHHHH
Confidence            21               2233444455566677775543

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=96.78  E-value=0.0027  Score=51.62  Aligned_cols=66  Identities=23%  Similarity=0.207  Sum_probs=57.9

Q ss_pred             HHHHHHHHHHHHHHhcccCCccceeecc-cchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhh
Q 017167           92 ALVGITANQGFYLLGLENTSPTFASAIQ-NSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT  163 (376)
Q Consensus        92 g~~~~~~~~~~~~~al~~~~~~~a~ii~-~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~  163 (376)
                      .+....++..++..++++.|.+.+-.+. ...-+.+++++++++||++++      .+++|+.+.++|++.+-
T Consensus        36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~------~~~~gi~lIi~GVi~l~  102 (120)
T PRK10452         36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSL------MKIAGLTTLVAGIVLIK  102 (120)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCH------HHHHHHHHHHHHHHHhh
Confidence            4444567889999999999999888774 588899999999999999999      59999999999999885

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=96.76  E-value=0.003  Score=59.93  Aligned_cols=138  Identities=14%  Similarity=0.207  Sum_probs=111.7

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCchHHHHHHHHHHHHHHH-HHHHhhhhccC-----CCCCHHHHHHH
Q 017167           18 EKLQLHLAMVALQFGYAGFHVVSRAALN---MGISKLVFPVYRNIIAFLLLL-PFAYFLEKKER-----PAMTLNFALQF   88 (376)
Q Consensus        18 ~~~~g~~~~lla~~~~g~~~~~~k~~~~---~~~~~~~~~~~r~~~a~l~l~-~~~~~~~~~~~-----~~~~~~~~~~~   88 (376)
                      =++.|...++++.+..+...++.|..+.   ...+++.+..+..-.+...++ |+....+....     ...+...+. .
T Consensus       160 fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~-~  238 (316)
T KOG1441|consen  160 FNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLI-L  238 (316)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHH-H
Confidence            3578999999999999999999999983   258999999999999999888 88766443222     123333333 3


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhh
Q 017167           89 ILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT  163 (376)
Q Consensus        89 ~~~g~~~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~  163 (376)
                      ....++. ...+...|..+.+++|-+-++....-=.++...++++++|++++      .+..|+.++++|+.+-.
T Consensus       239 ~~~sv~~-f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~------~n~~G~~iai~Gv~~Y~  306 (316)
T KOG1441|consen  239 LLNSVLA-FLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTF------LNALGYAIAILGVFLYS  306 (316)
T ss_pred             HHHHHHH-HHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCch------hhHHHHHHHHHHHHHHH
Confidence            3444555 56778899999999999999999888888999999999999999      69999999999999875

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.75  E-value=0.0017  Score=51.14  Aligned_cols=64  Identities=11%  Similarity=0.105  Sum_probs=56.8

Q ss_pred             HHHHHHHHHHHHHhcCCcee-eeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhccc
Q 017167          279 ASGIAFAVQIWCIDRGGPVF-VAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPNR  342 (376)
Q Consensus       279 ~~~~~~~l~~~al~~~~a~~-~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~~  342 (376)
                      +..+++.+...++|+.+.+. -++......+.+.+.++++|||+.++.+++|..++++|++..+.
T Consensus        39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL  103 (106)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence            46788999999999998744 46778888999999999999999999999999999999998764

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.70  E-value=0.003  Score=50.06  Aligned_cols=66  Identities=18%  Similarity=0.142  Sum_probs=57.3

Q ss_pred             HHHHHHHHHHHHHHHhcCCceee-eecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhccc
Q 017167          277 VVASGIAFAVQIWCIDRGGPVFV-AVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPNR  342 (376)
Q Consensus       277 ~~~~~~~~~l~~~al~~~~a~~~-s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~~  342 (376)
                      +++..+++++...++|+.+.+.+ ++...+..+.+.+.+++++||++++.+++|..+|+.|++..+.
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            33478899999999999987543 5667788899999999999999999999999999999998753

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=96.60  E-value=0.0031  Score=50.48  Aligned_cols=66  Identities=20%  Similarity=0.209  Sum_probs=56.0

Q ss_pred             HHHHHHHHHHHHHHhcccCCccceeec-ccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhh
Q 017167           92 ALVGITANQGFYLLGLENTSPTFASAI-QNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT  163 (376)
Q Consensus        92 g~~~~~~~~~~~~~al~~~~~~~a~ii-~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~  163 (376)
                      .+.+..++..++..++++.|.+.+-.+ ....-+.+.+++++++||++++      .+++|+.+.++|++++-
T Consensus        36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~------~~~~gi~lIi~GVi~l~  102 (110)
T PRK09541         36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDL------PAIIGMMLICAGVLVIN  102 (110)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCH------HHHHHHHHHHHHHHHHh
Confidence            344456778888889999999888766 4577788899999999999999      69999999999999995

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.55  E-value=0.015  Score=46.39  Aligned_cols=62  Identities=16%  Similarity=0.119  Sum_probs=53.6

Q ss_pred             HHHHHHHHHHHhcccCCccceeec-ccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhh
Q 017167           95 GITANQGFYLLGLENTSPTFASAI-QNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVI  162 (376)
Q Consensus        95 ~~~~~~~~~~~al~~~~~~~a~ii-~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li  162 (376)
                      +..+++.+...+++++|.+.+-.+ ....-+.+++.+++++||++++      .+++++.+.+.|++.+
T Consensus        44 ~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~------~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         44 AVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNR------KGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCH------HHHHHHHHHHHHHHHh
Confidence            345788888899999999888766 4477788899999999999999      6999999999999986

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.47  E-value=0.011  Score=47.24  Aligned_cols=109  Identities=5%  Similarity=-0.070  Sum_probs=77.0

Q ss_pred             HHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCcccccccCCchhHHHHHHHHHHHHHHHHHHHH
Q 017167          210 GHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIW  289 (376)
Q Consensus       210 ~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~  289 (376)
                      +-+++|+..+-+.||..++.+ +..-.. +.......     ++             ..|-.++  ....+..+-..|++
T Consensus         3 ~Vg~~WG~Tnpfik~g~~~~~-~~~~~~-~~~~~~~~-----Ll-------------~n~~y~i--pf~lNq~GSv~f~~   60 (113)
T PF10639_consen    3 LVGILWGCTNPFIKRGSSGLE-KVKASL-QLLQEIKF-----LL-------------LNPKYII--PFLLNQSGSVLFFL   60 (113)
T ss_pred             eehHHhcCchHHHHHHHhhcC-CccchH-HHHHHHHH-----HH-------------HhHHHHH--HHHHHHHHHHHHHH
Confidence            457899999999999988774 222221 21111111     11             0111111  22335666778899


Q ss_pred             HHhcCCceeeeec-chhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhc
Q 017167          290 CIDRGGPVFVAVY-QPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLP  340 (376)
Q Consensus       290 al~~~~a~~~s~~-~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~  340 (376)
                      .+.+.+-+.+.++ +.+.-+++++.++++.+|..+...++|+.+|+.|+.++
T Consensus        61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            9999999999988 69999999999988777778989999999999999874

Many members are annotated as potential transmembrane proteins.

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.43  E-value=0.0034  Score=48.71  Aligned_cols=57  Identities=19%  Similarity=0.278  Sum_probs=35.8

Q ss_pred             HHHHHHHHHHHHHHHhcCCceee-eecchhHHHHHHHHHHHHhCCccccccccchhhh
Q 017167          277 VVASGIAFAVQIWCIDRGGPVFV-AVYQPVQTLVVAIMASFALGEEFYLGGYVPATSP  333 (376)
Q Consensus       277 ~~~~~~~~~l~~~al~~~~a~~~-s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI  333 (376)
                      +.+.++++.++.+++|+.+.+.+ .+...+..+...+.+.+++||++++.+++|..+|
T Consensus        36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            33578899999999999998887 4556799999999999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=96.36  E-value=0.22  Score=47.40  Aligned_cols=297  Identities=14%  Similarity=0.057  Sum_probs=173.8

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhh-hcc----CCCCCHHHHHHHHHHHH
Q 017167           19 KLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLE-KKE----RPAMTLNFALQFILLAL   93 (376)
Q Consensus        19 ~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~-~~~----~~~~~~~~~~~~~~~g~   93 (376)
                      -..|+++..++.++-|..++-.|...+  .+ +|..+.-..+-.-+..|+....- -++    ....+...+.+..+.|+
T Consensus         5 ii~Gii~h~iGg~~~~sfy~P~kkvk~--Ws-WEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~   81 (344)
T PF06379_consen    5 IILGIIFHAIGGFASGSFYVPFKKVKG--WS-WESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGV   81 (344)
T ss_pred             HHHHHHHHHHHHHHhhhhccchhhcCC--cc-HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHH
Confidence            467899999999999999999998654  33 44444444444444555543321 111    12345567778888888


Q ss_pred             HHHHHHHHHHHHhcccCCccceeec-ccchhHHHHHHHHHHhhcc--ccccccCccceeehHhHHHHhHhhhhhccCCcc
Q 017167           94 VGITANQGFYLLGLENTSPTFASAI-QNSVPAITFLMAAIFRIEK--VRLDRKDGIAKVVGTLFCVAGATVITLYKGPTI  170 (376)
Q Consensus        94 ~~~~~~~~~~~~al~~~~~~~a~ii-~~~~Pl~~~lla~l~l~e~--~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~  170 (376)
                      +- .++...|=.+++|++.+...-+ ..+..++-.++-.++.++-  + .....+...++|++++++|+.+... .|...
T Consensus        82 lW-GIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l-~~~~~g~~vL~Gv~v~LiGIai~g~-AG~~K  158 (344)
T PF06379_consen   82 LW-GIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDEL-LATPSGQIVLLGVAVCLIGIAICGK-AGSMK  158 (344)
T ss_pred             HH-hcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCccccc-ccCCCchhhhhHHHHHHHHHHHHhH-HHHhh
Confidence            86 7899999999999998876643 5566677777766664421  1 1111234678899999999999963 34322


Q ss_pred             cCCCCCCCCCCCCCcchhhhccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhh---h---hC-CCcc----hhHHHH
Q 017167          171 YSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVL---K---KY-PARL----SVTAYT  239 (376)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~---~---~~-~~~~----~~~~~~  239 (376)
                      +...+.                +  ..+.+..+|+..++++++..+..++-.....   +   +. .++.    ......
T Consensus       159 e~~~~~----------------~--~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv  220 (344)
T PF06379_consen  159 EKELGE----------------E--AKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVV  220 (344)
T ss_pred             hhhhcc----------------c--hhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhh
Confidence            111000                0  0346677999999999998888776532211   0   00 0111    122223


Q ss_pred             HHHHHHHHHHHHHHhh---cCc---ccccccCC---chhHHHHHHHHHHHHHHHHHHHHHHhcCCce----eeeecchhH
Q 017167          240 CFFGLIQFMIIAAIFE---RNL---DAWIFHNG---GEVFSILYAGVVASGIAFAVQIWCIDRGGPV----FVAVYQPVQ  306 (376)
Q Consensus       240 ~~~~~~~~~~~~~~~~---~~~---~~~~~~~~---~~~~~ll~~g~~~~~~~~~l~~~al~~~~a~----~~s~~~~l~  306 (376)
                      +.-|.+..+.+.++..   .+.   .+.....+   .+...-++.|++ =...+.+|-.+-.+.++.    --.+.+.+.
T Consensus       221 ~~GGf~tN~~yc~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~l-Wy~qfffYg~G~s~lg~~~~~~sW~i~ma~~  299 (344)
T PF06379_consen  221 LWGGFITNLIYCLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVL-WYSQFFFYGMGESKLGASGPFSSWAIHMALI  299 (344)
T ss_pred             hhhHHHHHHHHHHHHHhhcCCCccccccccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCccccHHHHHHHHHH
Confidence            3344444454444321   111   11111111   233333444443 345566666666666643    233677788


Q ss_pred             HHHHHHHHHHHhCCc------cccccccchhhhhhhhhhcc
Q 017167          307 TLVVAIMASFALGEE------FYLGGYVPATSPARSILLPN  341 (376)
Q Consensus       307 pv~a~l~~~l~l~e~------~~~~~~iG~~lI~~gi~l~~  341 (376)
                      .+++-+.+.+ ++|-      +-..-++|.++++.++.++-
T Consensus       300 vl~snvwGl~-lkEWKg~s~kt~~vl~~G~~vlI~s~~ivG  339 (344)
T PF06379_consen  300 VLFSNVWGLI-LKEWKGASKKTIRVLVLGIAVLILSVVIVG  339 (344)
T ss_pred             HHHHHHHHHH-HHHhccCCcccHHHHHHHHHHHHHHHHHHh
Confidence            8888888865 6664      22334678888888877754

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.32  E-value=0.013  Score=46.23  Aligned_cols=65  Identities=23%  Similarity=0.205  Sum_probs=55.9

Q ss_pred             HHHHHHHHHHHHHhcccCCccceeec-ccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhh
Q 017167           93 LVGITANQGFYLLGLENTSPTFASAI-QNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT  163 (376)
Q Consensus        93 ~~~~~~~~~~~~~al~~~~~~~a~ii-~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~  163 (376)
                      +.+..+++.+...|++++|.+.+-.+ ...-.+.+++.+++++||+++.      .+++++.+.++|++.+-
T Consensus        37 ~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~------~~~~gl~LiiaGvi~Lk  102 (106)
T COG2076          37 IVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSL------IKLLGLALILAGVIGLK  102 (106)
T ss_pred             HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCH------HHHHHHHHHHHHHHHhh
Confidence            33356788889999999999888755 5678889999999999999999      69999999999999884

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.04  E-value=0.01  Score=47.08  Aligned_cols=65  Identities=11%  Similarity=0.102  Sum_probs=55.9

Q ss_pred             HHHHHHHHHHHHHhcccCCccceeec-ccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhh
Q 017167           93 LVGITANQGFYLLGLENTSPTFASAI-QNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT  163 (376)
Q Consensus        93 ~~~~~~~~~~~~~al~~~~~~~a~ii-~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~  163 (376)
                      +.+...++.+...++++.|.+.+-.+ ....-+.+++++++++||++++      .+++++.+.+.|++.+-
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~------~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASP------ARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCH------HHHHHHHHHHHHHHhhh
Confidence            33456788889999999999888766 4488889999999999999999      69999999999999884

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=95.66  E-value=0.0016  Score=58.63  Aligned_cols=145  Identities=16%  Similarity=0.198  Sum_probs=98.5

Q ss_pred             CcccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 017167            9 STRRMCSVPEKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQF   88 (376)
Q Consensus         9 ~~~~~~~~~~~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~   88 (376)
                      ++++.++.++-.+|...++.+.+.|-.+.+..+...-++.+...--..-++++++.   +...   +. .+...|..+.-
T Consensus       140 ~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~v~g~saiLPqAiGMv~~ali---~~~~---~~-~~~~~K~t~~n  212 (288)
T COG4975         140 NNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLFDVDGLSAILPQAIGMVIGALI---LGFF---KM-EKRFNKYTWLN  212 (288)
T ss_pred             ccccccChHhhhhheeeeeeeccceeeeEeeeccccccchhhhhHHHHHHHHHHHH---Hhhc---cc-ccchHHHHHHH
Confidence            33444555666788888888888888777777654322344433333333333332   2211   21 22344555667


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhh
Q 017167           89 ILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT  163 (376)
Q Consensus        89 ~~~g~~~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~  163 (376)
                      +.-|+.. +.++.++++|-+..+.+.+=.+..+.-+...+-+.+++|||-+.|+..  .-++|+++.++|+.++.
T Consensus       213 ii~G~~W-a~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~--~v~iGiilivvgai~lg  284 (288)
T COG4975         213 IIPGLIW-AIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMV--YVIIGIILIVVGAILLG  284 (288)
T ss_pred             HhhHHHH-HhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhh--hhhhhHHHHHHHhhhhh
Confidence            7778775 789999999999999999999999999999999999999998875322  44567777777777764

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=95.59  E-value=0.048  Score=50.24  Aligned_cols=196  Identities=11%  Similarity=0.004  Sum_probs=116.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017167           22 LHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQG  101 (376)
Q Consensus        22 g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  101 (376)
                      |++..+++.+++|.+.+-.|..- . -|++.+.++......+.-+.+....+   .++    ...+.++-|.+. +.++.
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~-~-gDg~~fQw~~~~~i~~~g~~v~~~~~---~p~----f~p~amlgG~lW-~~gN~   70 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFD-T-GDGFFFQWVMCSGIFLVGLVVNLILG---FPP----FYPWAMLGGALW-ATGNI   70 (254)
T ss_pred             CchhHHHHHHHhcccceeeEecc-C-CCcHHHHHHHHHHHHHHHHHHHHhcC---CCc----ceeHHHhhhhhh-hcCce
Confidence            45678999999999999999753 3 57887777777666655555544422   222    223445555654 78899


Q ss_pred             HHHHhcccCCccceeecccchhHHHH-HHHHH-HhhccccccccCccceeehHhHHHHhHhhhhhccCCcccC-----CC
Q 017167          102 FYLLGLENTSPTFASAIQNSVPAITF-LMAAI-FRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYS-----PA  174 (376)
Q Consensus       102 ~~~~al~~~~~~~a~ii~~~~Pl~~~-lla~l-~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~~~~~~-----~~  174 (376)
                      +-.-.++.++.+.+..+-.+.-+.+- ..+.+ +++++...- +...+.++|++++++|..+...-+.+..+.     ++
T Consensus        71 ~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~-~~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~~  149 (254)
T PF07857_consen   71 LVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVP-SSPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEET  149 (254)
T ss_pred             eehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceecccccccc-chhHHHHHHHHHHHHHHHheeeecCCCCCcccccccc
Confidence            99999999999999988776554443 33332 454443321 234578889999999988876433333111     11


Q ss_pred             CCCCCCCCCCcc---hhhhccccC--CCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhh
Q 017167          175 PPLNQIQPDSLT---STIFLSLGD--AKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKK  228 (376)
Q Consensus       175 ~~~~~~~~~~~~---~~~~~~~~~--~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~  228 (376)
                      +...++.++..+   ++...+..+  +.......|..+++++++.|+...+=.....++
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~  208 (254)
T PF07857_consen  150 PLSIEDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDH  208 (254)
T ss_pred             ccccccccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHhC
Confidence            111111111000   111111110  011235679999999999999887766655444

The region concerned is approximately 280 residues long.

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=95.56  E-value=0.25  Score=47.12  Aligned_cols=162  Identities=13%  Similarity=0.072  Sum_probs=102.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhhCC---CcchhHHHHHHHHHHHHHHHHHHhhcC--------cccccccCCchhHH
Q 017167          203 LGCVYLIGHCLSWSGWLVMQAPVLKKYP---ARLSVTAYTCFFGLIQFMIIAAIFERN--------LDAWIFHNGGEVFS  271 (376)
Q Consensus       203 ~G~~l~l~a~~~~a~~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~  271 (376)
                      .-.+..+...+.++......|...+...   .+.+..+..-+.-.+......+.-+..        ...+....+.+..-
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk   94 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK   94 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence            3444455555555555555555333221   344555555555555544444322101        00111112223333


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhcc---c-----c
Q 017167          272 ILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPN---R-----W  343 (376)
Q Consensus       272 ll~~g~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~---~-----~  343 (376)
                      +..-+++ .++-..+++.++.+.+|+...+...+....+.++..++++++.+..||...++...|+.+++   .     +
T Consensus        95 ~~vPa~i-YalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~  173 (345)
T KOG2234|consen   95 VSVPALI-YALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAK  173 (345)
T ss_pred             HHHHHHH-HHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCcc
Confidence            3333333 56666789999999999999999999999999999999999999999999999999999998   2     1


Q ss_pred             -ccccchhhHHHHHHhHhhhccc
Q 017167          344 -MSTCMLSFWIQMFVCLTAICSG  365 (376)
Q Consensus       344 -~~~~~~~~~~~~~~~~~~~~~~  365 (376)
                       ....++..++=.-++.+..+||
T Consensus       174 ~~~~~~n~~~G~~avl~~c~~Sg  196 (345)
T KOG2234|consen  174 SESSAQNPFLGLVAVLVACFLSG  196 (345)
T ss_pred             CCCcccchhhhHHHHHHHHHHHH
Confidence             3445666677666666666665

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=95.38  E-value=0.14  Score=47.88  Aligned_cols=140  Identities=13%  Similarity=0.120  Sum_probs=112.7

Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCchHHHHHHHHHHHHHHHHHHHhhhhccCC-----CCCHHHHHHHHH
Q 017167           17 PEKLQLHLAMVALQFGYAGFHVVSRAALNM-GISKLVFPVYRNIIAFLLLLPFAYFLEKKERP-----AMTLNFALQFIL   90 (376)
Q Consensus        17 ~~~~~g~~~~lla~~~~g~~~~~~k~~~~~-~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~-----~~~~~~~~~~~~   90 (376)
                      .+...|++++.....+-|..+..-+.+++. ++++....+.-.+...+.-.......+ ..++     +..++-++-.++
T Consensus       168 ~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg-~~~~av~F~~~hp~~~~Di~l  246 (327)
T KOG1581|consen  168 ENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQG-HLLPAVSFIKEHPDVAFDILL  246 (327)
T ss_pred             CCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCC-CCchHHHHHHcChhHHHHHHH
Confidence            467889999999999999988887777764 588888888888888877766654322 2111     334556677778


Q ss_pred             HHHHHHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhh
Q 017167           91 LALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITL  164 (376)
Q Consensus        91 ~g~~~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~  164 (376)
                      ...++ ++++.+.|+-++.-++-.-+.|+.+-=+++.+++-+.++.++++      .+|.|+.+.+.|..+=++
T Consensus       247 ~s~~g-avGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~------~q~~g~~iVFg~i~l~~~  313 (327)
T KOG1581|consen  247 YSTCG-AVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSS------EQWLGVLIVFGGIFLEIL  313 (327)
T ss_pred             HHHhh-hhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccch------hhccCeeeehHHHHHHHH
Confidence            88887 68999999999999998888899999999999999999999999      699999999999887654

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=95.00  E-value=0.27  Score=44.32  Aligned_cols=139  Identities=14%  Similarity=0.039  Sum_probs=97.2

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCchHHHHHHHHHHHHHHHHHHHhhhh-ccCC---CCCHHHHHHHHHHHH
Q 017167           19 KLQLHLAMVALQFGYAGFHVVSRAALNM-GISKLVFPVYRNIIAFLLLLPFAYFLEK-KERP---AMTLNFALQFILLAL   93 (376)
Q Consensus        19 ~~~g~~~~lla~~~~g~~~~~~k~~~~~-~~~~~~~~~~r~~~a~l~l~~~~~~~~~-~~~~---~~~~~~~~~~~~~g~   93 (376)
                      -..|.++++++-.+-|.....-...-.+ .-+.....+.-.+.+.+.+-.-+.+.+. .+..   ..-+..++-+.++++
T Consensus       170 ~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai  249 (337)
T KOG1580|consen  170 FGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAI  249 (337)
T ss_pred             cchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHH
Confidence            3567888888888888877665544332 1223344445555555444333222211 0000   001234566777888


Q ss_pred             HHHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhh
Q 017167           94 VGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITL  164 (376)
Q Consensus        94 ~~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~  164 (376)
                      .+ ++++.+.|.-+.+.+|-..+++..+--.|+.+.+.++++.+++.      ++|+|.++.+.|...=..
T Consensus       250 ~s-~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~------rQwlgtvlVF~aL~~D~~  313 (337)
T KOG1580|consen  250 AS-CLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSG------RQWLGTVLVFSALTADVV  313 (337)
T ss_pred             HH-HhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcH------HHHHHHHHHHHHhhhHhh
Confidence            86 78999999999999999999999999999999999999999999      499999999998877653

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=94.71  E-value=0.17  Score=42.68  Aligned_cols=140  Identities=12%  Similarity=0.036  Sum_probs=90.3

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHH
Q 017167           19 KLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITA   98 (376)
Q Consensus        19 ~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   98 (376)
                      .....++.+.+..+-.....+...+.+..-+|..-.+..+..+.+++..+.+..+++......++..+|...-|+++ ..
T Consensus         3 ~~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lG-a~   81 (150)
T COG3238           3 MYLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLG-AI   81 (150)
T ss_pred             cHHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchh-hh
Confidence            34566777788888888887777777642349999999999999998888887444333232344456677777776 44


Q ss_pred             HHHHHHHhcccCCccceeec-ccchhHHHHHHHHH-HhhccccccccCccceeehHhHHHHhHhhh
Q 017167           99 NQGFYLLGLENTSPTFASAI-QNSVPAITFLMAAI-FRIEKVRLDRKDGIAKVVGTLFCVAGATVI  162 (376)
Q Consensus        99 ~~~~~~~al~~~~~~~a~ii-~~~~Pl~~~lla~l-~l~e~~~~~~~~~~~~~igi~l~~~Gv~li  162 (376)
                      .-..-.....+++++....+ ..-+-+...++..+ +++++   +|..+..+++|+++.++|+.++
T Consensus        82 ~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~---~~~~~~~r~lgi~L~l~gil~~  144 (150)
T COG3238          82 FVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVP---KRPLNLPRILGILLVLAGILLA  144 (150)
T ss_pred             hhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCC---cCCCCHHHHHHHHHHHHHHHHh
Confidence            55555566667766655543 44455555555442 22222   2334447999999999995554

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=94.71  E-value=0.09  Score=40.70  Aligned_cols=56  Identities=23%  Similarity=0.190  Sum_probs=33.3

Q ss_pred             HHHHHHHHHHHHHhcccCCccceeec-ccchhHHHHHHHHHHhhccccccccCccceeehHhH
Q 017167           93 LVGITANQGFYLLGLENTSPTFASAI-QNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLF  154 (376)
Q Consensus        93 ~~~~~~~~~~~~~al~~~~~~~a~ii-~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l  154 (376)
                      +.+..++..++..++++.|.+.+-.+ .....+.+.+.+.+++||+++.      .++.|+.+
T Consensus        36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~------~~~~gi~l   92 (93)
T PF00893_consen   36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSL------SKWLGIGL   92 (93)
T ss_dssp             HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCH------HHHhheee
Confidence            33456788899999999999999766 4588999999999999999999      58888765

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>TIGR00803 nst UDP-galactose transporter

Probab=93.85  E-value=0.076  Score=47.92  Aligned_cols=136  Identities=7%  Similarity=-0.017  Sum_probs=80.7

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHH-HHHHHHHHHHHHhhhhccCCCCC--HHHHHHHHHHHHH
Q 017167           18 EKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRN-IIAFLLLLPFAYFLEKKERPAMT--LNFALQFILLALV   94 (376)
Q Consensus        18 ~~~~g~~~~lla~~~~g~~~~~~k~~~~~~~~~~~~~~~r~-~~a~l~l~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~   94 (376)
                      +...+....+.+.++-+...+..++..+++-.....-.+.. +.+.+.................+  .+.........+.
T Consensus        82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (222)
T TIGR00803        82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIVGLL  161 (222)
T ss_pred             cHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHHHHH
Confidence            34566676777777777888888877654211111111111 11111111111111110000000  0001112222233


Q ss_pred             HHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHh
Q 017167           95 GITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGAT  160 (376)
Q Consensus        95 ~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~  160 (376)
                       ...+..+..+.+++.++...+....+.++++.+++.++++|+++.      .++.|+.+.+.|+.
T Consensus       162 -~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~------~~~~g~~lV~~~~~  220 (222)
T TIGR00803       162 -NVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISS------TFYLGAILVFLATF  220 (222)
T ss_pred             -HHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccH------HHHHHHHHHHeeeE
Confidence             356777888999999999999999999999999999999999999      59999999888865

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=92.85  E-value=0.44  Score=43.94  Aligned_cols=142  Identities=18%  Similarity=0.162  Sum_probs=103.4

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCchHHHHHHHHHHHHHHHHHHHhhhh----ccCCCC-CHHHHHHHHHHH
Q 017167           19 KLQLHLAMVALQFGYAGFHVVSRAALNM-GISKLVFPVYRNIIAFLLLLPFAYFLEK----KERPAM-TLNFALQFILLA   92 (376)
Q Consensus        19 ~~~g~~~~lla~~~~g~~~~~~k~~~~~-~~~~~~~~~~r~~~a~l~l~~~~~~~~~----~~~~~~-~~~~~~~~~~~g   92 (376)
                      .+.|.++.+++.+.-+...+..|..... +=--+.+.++..+.+.++++|.+...+.    ...+.. ..+.|....+.|
T Consensus       183 s~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsg  262 (347)
T KOG1442|consen  183 SWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSG  262 (347)
T ss_pred             chhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHH
Confidence            5789999999999999999999976543 2235678999999999999999987643    122233 566666677777


Q ss_pred             HHHHHHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhccC
Q 017167           93 LVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKG  167 (376)
Q Consensus        93 ~~~~~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~~~  167 (376)
                      ++++.++.. -.+-++-++|-+-.+-...-...-.+++..+++|..+.      ..|.+-++.++|-..-..-++
T Consensus       263 lfgF~mgyv-Tg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~------lwwtsn~~vLvgs~~YT~vk~  330 (347)
T KOG1442|consen  263 LFGFAMGYV-TGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSG------LWWTSNIVVLVGSLAYTLVKE  330 (347)
T ss_pred             HHHHHhhhe-eeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhh------heeeeeEEEEehhHHHHHHHH
Confidence            887655443 23345556665444444455566688999999999998      688899999999888765443

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=92.57  E-value=0.6  Score=36.53  Aligned_cols=110  Identities=16%  Similarity=0.276  Sum_probs=71.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCch------HHHHHHHHHHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHHH
Q 017167           25 AMVALQFGYAGFHVVSRAALNMGISKL------VFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITA   98 (376)
Q Consensus        25 ~~lla~~~~g~~~~~~k~~~~~~~~~~------~~~~~r~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   98 (376)
                      -++....+||..+++.|.... +++..      ...+.|-....                ..+++.+..++    ++ -.
T Consensus         7 ~lvaVgllWG~Tnplirrgs~-g~~~v~~~~~k~~~~lqe~~tl----------------~l~w~Y~iPFl----lN-qc   64 (125)
T KOG4831|consen    7 KLVAVGLLWGATNPLIRRGSL-GWDKVKSSSRKIMIALQEMKTL----------------FLNWEYLIPFL----LN-QC   64 (125)
T ss_pred             HHHHHHHHHccccHHHHHHHh-hHhhccCchHHHHHHHHHHHHH----------------HHhHHHHHHHH----HH-Hh
Confidence            366778999999999998875 34322      12222222211                12233322222    12 24


Q ss_pred             HHHHHHHhcccCCccceeeccc-chhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhh
Q 017167           99 NQGFYLLGLENTSPTFASAIQN-SVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVI  162 (376)
Q Consensus        99 ~~~~~~~al~~~~~~~a~ii~~-~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li  162 (376)
                      +..+||.-+++.+.+.++.+.+ +.-.|+++.+..+ +|+...+     ..++|..+.+.|..+.
T Consensus        65 gSaly~~tLa~a~islavpv~nsltfafta~~G~~L-GE~~~g~-----~a~lGt~liv~Gi~Lc  123 (125)
T KOG4831|consen   65 GSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKAL-GEETQGG-----LALLGTSLIVFGIWLC  123 (125)
T ss_pred             hHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHh-ccccccc-----eeehhhhHHhhhhhhe
Confidence            5667889999999999998855 5567777777655 6666665     6899999999998775

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=92.53  E-value=1.3  Score=41.76  Aligned_cols=152  Identities=11%  Similarity=0.050  Sum_probs=96.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCCCcchhHH--HHHHHHHHHHHHHHHHhhcCcccccccCCchhHHHHHHHHHHHHHH
Q 017167          206 VYLIGHCLSWSGWLVMQAPVLKKYPARLSVTA--YTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIA  283 (376)
Q Consensus       206 ~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~  283 (376)
                      .-++.=+++-..-.+..|..+.+++-+.....  +|.+.+.+........---+.++.+......|..+-   ++ ....
T Consensus        15 ~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~---~l-f~~~   90 (314)
T KOG1444|consen   15 LSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVS---LL-FVGM   90 (314)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHH---HH-HHHH
Confidence            33333344444455667887877764544444  888888777665544311122222222333343321   11 1222


Q ss_pred             HHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhccccccccchh--hHHHHHHhHhh
Q 017167          284 FAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPNRWMSTCMLS--FWIQMFVCLTA  361 (376)
Q Consensus       284 ~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~~~~~~~~~~--~~~~~~~~~~~  361 (376)
                      .+.=.+++|+++....+++....|+.+.+.+..++|-+++...+.....+++|.....-....-..-  +|.++-..+++
T Consensus        91 i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~~a  170 (314)
T KOG1444|consen   91 LFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLTTA  170 (314)
T ss_pred             HHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHHHH
Confidence            3344578999999999999999999999999999999999999999999999888865444444443  56665554443

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=92.28  E-value=0.11  Score=48.98  Aligned_cols=136  Identities=13%  Similarity=0.112  Sum_probs=97.5

Q ss_pred             CCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCcccccccCCchhHHHHHHH
Q 017167          197 KGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAG  276 (376)
Q Consensus       197 ~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g  276 (376)
                      ...++..|.++++.+++.-+....+.|+..++.. . .                .  .+.+....... .++   .-|.|
T Consensus        15 ~~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~-~-~----------------~--~ra~~gg~~yl-~~~---~Ww~G   70 (335)
T KOG2922|consen   15 MSSDNIIGLVLAISSSIFIGSSFILKKKGLKRAG-A-S----------------G--LRAGEGGYGYL-KEP---LWWAG   70 (335)
T ss_pred             hccCceeeeeehhhccEEEeeehhhhHHHHHHHh-h-h----------------c--ccccCCCcchh-hhH---HHHHH
Confidence            3466789999999999999999999887766542 1 0                0  01111111111 112   22346


Q ss_pred             HHHHHHHHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhc-cccccccchhhHHHH
Q 017167          277 VVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLP-NRWMSTCMLSFWIQM  355 (376)
Q Consensus       277 ~~~~~~~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~-~~~~~~~~~~~~~~~  355 (376)
                      .+...++-..-+.+.-..+++.++.+..++.+...+++..+++|++++...+|+++.++|-.+. .-.+++.++-..-|+
T Consensus        71 ~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~el  150 (335)
T KOG2922|consen   71 MLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEEV  150 (335)
T ss_pred             HHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccccHHHH
Confidence            6667788888889999999999999999999999999999999999999999999998877664 334444444444444


Q ss_pred             H
Q 017167          356 F  356 (376)
Q Consensus       356 ~  356 (376)
                      .
T Consensus       151 ~  151 (335)
T KOG2922|consen  151 W  151 (335)
T ss_pred             H
Confidence            3

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=90.08  E-value=0.2  Score=43.88  Aligned_cols=76  Identities=12%  Similarity=-0.006  Sum_probs=65.8

Q ss_pred             HHHHHHHHHhcCCceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhccccccccchhhHHHHHHh
Q 017167          283 AFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPNRWMSTCMLSFWIQMFVC  358 (376)
Q Consensus       283 ~~~l~~~al~~~~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~~~~~~~~~~~~~~~~~~  358 (376)
                      +.+.|..++++++|+.++.+...+-.+..+++++++++++...+++...+.+.|++....-..+.+.+.-+-+++.
T Consensus        66 aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a~e~iGi~~AV  141 (290)
T KOG4314|consen   66 ANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHADEIIGIACAV  141 (290)
T ss_pred             CCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhhhhhhhHHHHH
Confidence            4678999999999999999999999999999999999999999999999999999998765556666655555544

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=86.82  E-value=2.2  Score=40.07  Aligned_cols=146  Identities=10%  Similarity=0.056  Sum_probs=100.7

Q ss_pred             HHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCcccccccCCchhHH----HHHHHHHHHHHHHHHHHHHHhcC
Q 017167          219 LVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFS----ILYAGVVASGIAFAVQIWCIDRG  294 (376)
Q Consensus       219 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----ll~~g~~~~~~~~~l~~~al~~~  294 (376)
                      ..+.++..++++-|+.++.+++..-.+.....-...+.....  ..++..|..    +.-.|+ ++++=..+-++++++.
T Consensus        32 tf~~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r--~r~~~sw~~~Lr~~aPtal-ata~DIGLSN~sl~yV  108 (349)
T KOG1443|consen   32 TFYFKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPR--ARVVLSWRDYLRRLAPTAL-ATALDIGLSNWSLEYV  108 (349)
T ss_pred             HHHhhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCc--cccCCcHHHHHHHhhhhhh-hhhcccccccceeeee
Confidence            344555555665577777777766655554444433322111  112233332    234455 3677778889999999


Q ss_pred             CceeeeecchhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhccccccccchhhHHHHHHhHhhhcccccee
Q 017167          295 GPVFVAVYQPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPNRWMSTCMLSFWIQMFVCLTAICSGPQFT  369 (376)
Q Consensus       295 ~a~~~s~~~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (376)
                      +.+.-++.-...+++.++++.++-=|++++.-..=..+|.+|+++..-|  ..|--.-+=.++..+..|+|=..+
T Consensus       109 tlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~K--sTqf~i~Gf~lv~~aS~~sGlRW~  181 (349)
T KOG1443|consen  109 TLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYK--STQFNIEGFFLVLAASLLSGLRWA  181 (349)
T ss_pred             eeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEec--ccceeehhHHHHHHHHHhhhhhHH
Confidence            9999999999999999999999999999999998888999999987533  334555566777778888885443

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=80.13  E-value=5  Score=38.46  Aligned_cols=140  Identities=11%  Similarity=0.034  Sum_probs=87.4

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhh-cC-cccccccCCchhHHHHHHH
Q 017167          199 KNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFE-RN-LDAWIFHNGGEVFSILYAG  276 (376)
Q Consensus       199 ~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~ll~~g  276 (376)
                      .+...|+++..+++++.+.+.+=.|| .|+++ -++.-..+.+++.+..-+...... ++ .+.....+...+....+.|
T Consensus         3 ~~ii~Gii~h~iGg~~~~sfy~P~kk-vk~Ws-WEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G   80 (344)
T PF06379_consen    3 SAIILGIIFHAIGGFASGSFYVPFKK-VKGWS-WESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFG   80 (344)
T ss_pred             chHHHHHHHHHHHHHHhhhhccchhh-cCCcc-HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHH
Confidence            44678999999999999998888777 45662 444444455554444322222211 11 1112223344555666667


Q ss_pred             HHHHHHHHHHHHHHHhcCCceee-eecchhHHHHHHHHHHHHhC-------Cccccccccchhhhhhhhhhcc
Q 017167          277 VVASGIAFAVQIWCIDRGGPVFV-AVYQPVQTLVVAIMASFALG-------EEFYLGGYVPATSPARSILLPN  341 (376)
Q Consensus       277 ~~~~~~~~~l~~~al~~~~a~~~-s~~~~l~pv~a~l~~~l~l~-------e~~~~~~~iG~~lI~~gi~l~~  341 (376)
                      ++ =.++-..|-.++||++.+.. ++..-+..+++.++--++.|       ++-....++|.++.++|+.+..
T Consensus        81 ~l-WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g  152 (344)
T PF06379_consen   81 VL-WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICG  152 (344)
T ss_pred             HH-HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHh
Confidence            76 67888889999999987543 34445555555555545433       2234567899999999999975

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=80.04  E-value=4  Score=36.71  Aligned_cols=137  Identities=15%  Similarity=0.185  Sum_probs=100.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc-CCCchHHHHHHHHHHHHHHHHHHHhhhhccCC----CCCHHHHHHHHHHHHHHH
Q 017167           22 LHLAMVALQFGYAGFHVVSRAALNM-GISKLVFPVYRNIIAFLLLLPFAYFLEKKERP----AMTLNFALQFILLALVGI   96 (376)
Q Consensus        22 g~~~~lla~~~~g~~~~~~k~~~~~-~~~~~~~~~~r~~~a~l~l~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~   96 (376)
                      |++.+..-.+.-+..-...|.-.+. ++.-++..++..+++..++..+....+..+..    ..+.....+..+.|+...
T Consensus       156 GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~sv  235 (309)
T COG5070         156 GYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSV  235 (309)
T ss_pred             ceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHh
Confidence            5555665555555666666655442 46678899999999999998888766533221    334445567777787764


Q ss_pred             HHHHHHHHHhcccCCccceeecccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhhc
Q 017167           97 TANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLY  165 (376)
Q Consensus        97 ~~~~~~~~~al~~~~~~~a~ii~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~~  165 (376)
                      + -..+--+.++-++.+.-+....+.-.-.++-+.++++|+.+.      ..+.++++++....+-+..
T Consensus       236 g-iSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf------~si~sillGflsg~iYava  297 (309)
T COG5070         236 G-ISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNF------LSIFSILLGFLSGAIYAVA  297 (309)
T ss_pred             h-hhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhH------HHHHHHHHHHHHHHHHHHH
Confidence            3 344566778888988888888888888999999999999999      6888999888877766543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	376
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.69
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.47
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.28
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.23

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.69  E-value=8e-09  Score=84.96  Aligned_cols=71  Identities=8%  Similarity=0.047  Sum_probs=54.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCceeeeec-chhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhccccc
Q 017167          274 YAGVVASGIAFAVQIWCIDRGGPVFVAVY-QPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPNRWM  344 (376)
Q Consensus       274 ~~g~~~~~~~~~l~~~al~~~~a~~~s~~-~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~~~~  344 (376)
                      ..+++++++++++|.+++++.+++++..+ ..+.|+++.+++++++||++++.+++|.++|++|+++.++..
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            35666799999999999999999999998 899999999999999999999999999999999999987643

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.47  E-value=1.4e-07  Score=74.77  Aligned_cols=72  Identities=8%  Similarity=0.045  Sum_probs=65.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCceeeeec-chhHHHHHHHHHHHHhCCccccccccchhhhhhhhhhcccccc
Q 017167          274 YAGVVASGIAFAVQIWCIDRGGPVFVAVY-QPVQTLVVAIMASFALGEEFYLGGYVPATSPARSILLPNRWMS  345 (376)
Q Consensus       274 ~~g~~~~~~~~~l~~~al~~~~a~~~s~~-~~l~pv~a~l~~~l~l~e~~~~~~~iG~~lI~~gi~l~~~~~~  345 (376)
                      ..++++.++++.++.+++|+.+.+.+..+ ..+.|+.+.+.+++++||++++.+++|..+|+.|+++.++..+
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~~  106 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLSR  106 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCCC
Confidence            35556689999999999999999999888 8999999999999999999999999999999999999876543

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.28  E-value=2.8e-06  Score=67.12  Aligned_cols=68  Identities=18%  Similarity=0.189  Sum_probs=62.5

Q ss_pred             HHHHHHHHHHHHHHHHhcccCCccceeec-ccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhh
Q 017167           90 LLALVGITANQGFYLLGLENTSPTFASAI-QNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT  163 (376)
Q Consensus        90 ~~g~~~~~~~~~~~~~al~~~~~~~a~ii-~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~  163 (376)
                      ..+++...+++.++..++++.|.+.+..+ ..+.|+++++++++++||++++      .+++|+.+.+.|++++.
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~------~~~~Gi~lIi~Gv~~l~  102 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDL------PAIIGMMLICAGVLIIN  102 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCH------HHHHHHHHHHHHHHHHh
Confidence            45666667899999999999999999988 7999999999999999999999      59999999999999986

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.23  E-value=5.5e-07  Score=73.91  Aligned_cols=69  Identities=19%  Similarity=0.206  Sum_probs=53.4

Q ss_pred             HHHHHHHHHHHHHHHHhcccCCccceeec-ccchhHHHHHHHHHHhhccccccccCccceeehHhHHHHhHhhhhh
Q 017167           90 LLALVGITANQGFYLLGLENTSPTFASAI-QNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITL  164 (376)
Q Consensus        90 ~~g~~~~~~~~~~~~~al~~~~~~~a~ii-~~~~Pl~~~lla~l~l~e~~~~~~~~~~~~~igi~l~~~Gv~li~~  164 (376)
                      +.+++...+++.++..++++.|++.+..+ ..+.|++++++++++++|++++      .+++|+.+.++|++++..
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~------~~~~Gi~LIi~GV~ll~~  103 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDL------PAIIGMMLICAGVLIINL  103 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------------CHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCH------HHHHHHHHHHHHHHHHhc
Confidence            56666678899999999999999999998 8999999999999999999999      599999999999999974

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00