Citrus Sinensis ID: 017220

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-----
Protein Sequence
MKPQPDVQGHPGTMMAFQEDYVVNNELQGHCFQGFDKCEDSASGLHNPTVGISGLTTQLDYSHLIFRQELENLLLDGVNGTEECEKDIGPNSLPIIHPPPSAFMGPKCALWDCTRPALGSELFEDYCSNFHATLAVSEDSPGLTPVLRPGGINLKDSLLFNAVNARAQGKRVGIPHCEGAATTKSPWNATELFDLALLEGETIREWLFFDKHRKAFESGTRKQRSLPDHSGRGWHESRKLVMKEFGGQKRSYYMDPQPSDGLEWHLYEYEIIGFDAYALYRLEVKLASEKKSPKVKVTKDSLADLQKKMGRLTADVPVDNKSSFKGKIETNGKVDSANVNSSQNEMTSATEILHHGSSSPYKYLADNSADYYHKY
Secondary Structure (PSIPRED)
ccccccccccccccEEEHHHHHccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHcccccHHHHHccccccccccccccccHHHHHHHHHHHHccccccccccccccccccEEEEEEEEccccEEEEEEEEEEEccccccccccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccHHHEEHccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccEccccccccccHHHHHHcccHHHHHHHccccccccccEEccccccccccHHHHHHHHHHcccccccccccccccccccccccHHccEEEccccHHHHHHHcccccccccccccccccccccccccccccHHHHHHHccccccEEccccccccccEEEEEEEEEcccccEEEEEEEEEEcccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccc
Coil and Loop (DISEMBL)
mkpqpdvqghpgtmmaFQEDYVVnnelqghcfqgfdkcedsasglhnptvgisglttqldySHLIFRQELENLLLdgvngteecekdigpnslpiihpppsafmgpkcalwdctrpalgseLFEDYCSNFHAtlavsedspgltpvlrpgginlkdsllFNAVNAraqgkrvgiphcegaattkspwnaTELFDLALLEGETIREWLFFDKHRKafesgtrkqrslpdhsgrgwhESRKLVMKEfggqkrsyymdpqpsdglewhlYEYEIIGFDAYALYRLEVKLAsekkspkvkvTKDSLADLQKKMGrltadvpvdnkssfkgkietngkvdsanvnssqneMTSATEIlhhgssspykyladnsadyyhky
Flexible Loop (DISEMBL)
mkpqpdvqghpgTMMAFQEDYVVNNELQGHCFQGFDKCEDSASGLHNPTVGISGLTTQLDYSHLIFRQELENLLLDGVNGTEECEKDIGPNSLPIIHPPPSAFMGPKCALWDCTRPALGSELFEDYCSNFHATLAVSEDSPGLTPVLRPGGINLKDSLLFNAVNARAQGKRVGIPHCegaattkspwnATELFDLALLEGETIREWLFFDKHRKafesgtrkqrslpdhsgrgwhesrKLVMKEFGGQKRSYYMDPQPSDGLEWHLYEYEIIGFDAYALYRLEVKLasekkspkvkvtkDSLADLQkkmgrltadvpvdnkssfkgkietngkvdsanvnSSQNEMTSATEIlhhgssspykyladnsaDYYHKY
Low Complexity Region (SEG)
MKPQPDVQGHPGTMMAFQEDYVVNNELQGHCFQGFDKCEDSASGLHNPTVGISGLTTQLDYSHLIFRQELENLLLDGVNGTEECEKDIGPNSLPIIHPPPSAFMGPKCALWDCTRPALGSELFEDYCSNFHATLAVSEDSPGLTPVLRPGGINLKDSLLFNAVNARAQGKRVGIPHCEGAATTKSPWNATELFDLALLEGETIREWLFFDKHRKAFESGTRKQRSLPDHSGRGWHESRKLVMKEFGGQKRSYYMDPQPSDGLEWHLYEYEIIGFDAYALYRLEVKLASEKKSPKVKVTKDSLADLQKKMGRLTADVPVDNKSSFKGKIETNGKVDSANVNSSQNEMTSATEILHHGSSSPYKYLADNSADYYHKY
Disordered region (IsUnstruct)
**************MAFQEDYVVNNELQGHCFQGFDKCEDSASGLHNPTVGISGLTTQLDYSHLIFRQELENLLLDGVNGTEECEKDIGPNSLPIIHPPPSAFMGPKCALWDCTRPALGSELFEDYCSNFHATLAVSEDSPGLTPVLRPGGINLKDSLLFNAVNARAQGKRVGIPHCEGAATTKSPWNATELFDLALLEGETIREWLFFDKHR**********************************************DGLEWHLYEYEIIGFDAYALYRLEVKL*****************************************************************************************
Disordered Region (DISOPRED)
**********PGTMMAFQEDYVVNNELQGHCFQGFDKCEDSASGLHNPTVGISGLTTQLDYSHLIFRQELENLLLDGVNGTEECEKDIGPNSLPIIHPPPSAFMGPKCALWDCTRPALGSELFEDYCSNFHATLAVSEDSPGLTPVLRPGGINLKDSLLFNAVNARAQGKRVGIPHCEGAATTKSPWNATELFDLALLEGETIREWLFFDKHR*****************GRGWHESRKLVMKEFGGQKRSYYMDPQPSDGLEWHLYEYEIIGFDAYALYRLE*************************MG*******************************SQNEMTSATEILHHGSSSPYKYLADNS*DYYH**
Disordered Region (DISEMBL)
*********HPGTMMAFQEDYVVNNELQGHCFQGFDKCEDSASGLHNPTVGISGLTTQLDYSHLIFRQELENLLLDGVNGTEECEKDIGPNSLPIIHPPPSAFMGPKCALWDCTRPALGSELFEDYCSNFHATLAVSEDSPGLTPVLRPGGINLKDSLLFNAVNARAQGKRVGIPHCEGAATTKSPWNATELFDLALLEGETIREWLFFDKHRKAF*****************WHESRKLVMKEFGGQKRSYYMDPQPSDGLEWHLYEYEIIGFDAYALYRLEVKLASEK********KDSLADLQKKMGRLTADVPVDNKSSFKGKIETNGKVDSANVNSSQNEMTSATEILHHGSSSPYKYLADNSADYYHKY
Disordered Region (DISPRO)
*****DVQGHPGTMMAFQEDYVVNNELQGHCFQGFDKCEDSASGLHNPTVGISGLTTQLDYSHLIFRQELENLLLDGVNGTEECEKDIGPNSLPIIHPPPSAFMGPKCALWDCTRPALGSELFEDYCSNFHATLAVSEDSPGLTPVLRPGGINLKDSLLFNAVNARAQGKRVGIPHCEGAATTKSPWNATELFDLALLEGETIREWLFFDKHRKA********RSLPDHSGRGWHESRKLVMKEFGGQKRSYYMDPQPSDGLEWHLYEYEIIGFDAYALYRLEVKLAS***********************L*************************************TEILHHGSSSPYKYLADNSADYYHK*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKPQPDVQGHPGTMMAFQEDYVVNNELQGHCFQGFDKCEDSASGLHNPTVGISGLTTQLDYSHLIFRQELENLLLDGVNGTEECEKDIGPNSLPIIHPPPSAFMGPKCALWDCTRPALGSELFEDYCSNFHATLAVSEDSPGLTPVLRPGGINLKDSLLFNAVNARAQGKRVGIPHCEGAATTKSPWNATELFDLALLEGETIREWLFFDKHRKAFESGTRKQRSLPDHSGRGWHESRKLVMKEFGGQKRSYYMDPQPSDGLEWHLYEYEIIGFDAYALYRLEVKLASEKKSPKVKVTKDSLADLQKKMGRLTADVPVDNKSSFKGKIETNGKVDSANVNSSQNEMTSATEILHHGSSSPYKYLADNSADYYHKY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	375	2.2.26 [Sep-21-2011]
Q9SGQ0	486	Transcription factor VOZ1	yes	no	0.965	0.744	0.527	1e-101
Q9SLB9	450	Transcription factor VOZ2	no	no	0.797	0.664	0.581	6e-97

>sp|Q9SGQ0|VOZ1_ARATH Transcription factor VOZ1 OS=Arabidopsis thaliana GN=VOZ1 PE=1 SV=1

 Score =  370 bits (949), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 203/385 (52%), Positives = 242/385 (62%), Gaps = 23/385 (5%)

Query: 2   KPQP-DVQGHPGTMMAFQEDYVVNNELQGHCFQGFDKCEDSASGLHNPTVGISGLTTQLD 60
           KP+P D     G    FQ  Y +      H     D C+D +    N   G + L     
Sbjct: 109 KPEPADQNLEAGKAAVFQRGYNLVQGKSEHGLPLVDNCKDLSLAAGNNFDGTAPLEYHQQ 168

Query: 61  YSHLIFRQELENLLLDGVNGTEECEKDIGP----NSLPIIHPPPSAFMGPKCALWDCTRP 116
           Y     +QE E     G N         GP    N +P I PPPSAF+GPKCALWDC RP
Sbjct: 169 YD---LQQEFEPNFNGGFNNCPSYGVVEGPIHISNFIPTICPPPSAFLGPKCALWDCPRP 225

Query: 117 ALGSELFEDYCSNFHATLAVSEDSPGLTPVLRPGGINLKDSLLFNAVNARAQGKRVGIPH 176
           A G + F+DYCS+FHA LA +E  PG+ PV+RPGGI LKD LLF A++A+A GK VGIP 
Sbjct: 226 AQGFDWFQDYCSSFHAALAFNEGPPGMNPVVRPGGIGLKDGLLFAALSAKAGGKDVGIPE 285

Query: 177 CEGAATTKSPWNATELFDLALLEGETIREWLFFDKHRKAFESGTRKQRSLPDHSGRGWHE 236
           CEGAAT KSPWNA ELFDL +LE ET+REWLFFDK R+AFESG RKQRSLPD++GRGWHE
Sbjct: 286 CEGAATAKSPWNAPELFDLTVLESETLREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHE 345

Query: 237 SRKLVMKEFGGQKRSYYMDPQPSDGLEWHLYEYEIIGFDAYALYRLEVKLASEKKSPKVK 296
           SRK +M EFGG KRSYYMDPQP    EWHLYEYEI   DA ALYRLE+KL   KK+ K K
Sbjct: 346 SRKQIMVEFGGLKRSYYMDPQPLHHFEWHLYEYEINKCDACALYRLELKLVDGKKTSKGK 405

Query: 297 VTKDSLADLQKKMGRLTADVPVD---------NKSSFKGKIETNGKVDSANVNSSQNEMT 347
           V+ DS+ADLQK+MGRLTA+ P +         NK   KG+ + + KV + NV   QN + 
Sbjct: 406 VSNDSVADLQKQMGRLTAEFPPENNTTNTTNNNKRCIKGRPKVSTKVATGNV---QNTVE 462

Query: 348 SATEILHHGSSSPYKYLADNSADYY 372
            A +   +G    + YL  N +DYY
Sbjct: 463 QAND---YGVGEEFNYLVGNLSDYY 484

Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SLB9|VOZ2_ARATH Transcription factor VOZ2 OS=Arabidopsis thaliana GN=VOZ2 PE=1 SV=2

 Score =  354 bits (909), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 178/306 (58%), Positives = 223/306 (72%), Gaps = 7/306 (2%)

Query: 19  EDYVVNNELQG----HCFQGFDKCEDSASGLHNPTVGIS-GLTTQLDYSHLIFRQELENL 73
           ED + + E  G    + ++GFD   +SA   H+  +  +  +T+Q DY     RQEL+N 
Sbjct: 136 EDALNSTETHGQQLHYGYEGFDPSINSAPDFHDQKLSSNLDITSQYDYIFSEVRQELDNS 195

Query: 74  LLDGVNGTEECEKDIGPNSLPIIHPPPSAFMGPKCALWDCTRPALGSELFEDYCSNFHAT 133
               ++ +EE +     ++   +  PPSAF+GPKCALWDCTRPA GSE + DYCSN+H T
Sbjct: 196 PSTKLDSSEEIDNFAEFSTPSSVRVPPSAFLGPKCALWDCTRPAQGSEWYLDYCSNYHGT 255

Query: 134 LAVSEDSPGLTPVLRPGGINLKDSLLFNAVNARAQGKRVGIPHCEGAATTKSPWNATELF 193
           LA++EDSPG  PVLRPGGI+LKD+LL +A+ A+ QGK VGIP CEGA  TK PWNA ELF
Sbjct: 256 LALNEDSPGTAPVLRPGGISLKDNLLIDALRAKTQGKNVGIPVCEGAVNTKCPWNAAELF 315

Query: 194 DLALLEGETIREWLFFDKHRKAFESGTRKQRSLPDHSGRGWHESRKLVMKEFGGQKRSYY 253
            L L+EGETIREWLFFDK R+A++SG RKQRSLPD+SGRGWHESRK +MKE  GQKRSYY
Sbjct: 316 HLELVEGETIREWLFFDKPRRAYDSGNRKQRSLPDYSGRGWHESRKQLMKEQEGQKRSYY 375

Query: 254 MDPQPSDGLEWHLYEYEIIGFDAYALYRLEVKLASEKKSPKVKVTKDSLADLQKKMG--R 311
           MDPQP    EWHL+EY+I   DA ALYRLE+K+ + KKSPK K++KD LADLQKKMG  +
Sbjct: 376 MDPQPPGPFEWHLFEYQINESDACALYRLELKVGNGKKSPKGKISKDPLADLQKKMGQFK 435

Query: 312 LTADVP 317
           + +D P
Sbjct: 436 VASDKP 441

Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ1 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Binds as a dimer to the palindromic sequence 5'-GCGTNNNNNNNACGC-3'. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	375
147801138	503	hypothetical protein VITISV_019063 [Viti	0.992	0.739	0.626	1e-129
302143373	480	unnamed protein product [Vitis vinifera]	0.986	0.770	0.627	1e-129
225443564	485	PREDICTED: uncharacterized protein LOC10	0.978	0.756	0.599	1e-121
297740447	484	unnamed protein product [Vitis vinifera]	0.978	0.758	0.599	1e-121
359485265	458	PREDICTED: uncharacterized protein LOC10	0.885	0.724	0.650	1e-120
255563002	484	conserved hypothetical protein [Ricinus	0.984	0.762	0.570	1e-115
224146515	449	predicted protein [Populus trichocarpa]	0.88	0.734	0.635	1e-115
356521424	477	PREDICTED: uncharacterized protein LOC10	0.970	0.763	0.568	1e-113
295841593	483	MdVOZ1 [Malus x domestica]	0.986	0.766	0.56	1e-113
224122038	438	predicted protein [Populus trichocarpa]	0.858	0.735	0.617	1e-112

>gi|147801138|emb|CAN71043.1| hypothetical protein VITISV_019063 [Vitis vinifera]

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 237/378 (62%), Positives = 274/378 (72%), Gaps = 6/378 (1%)

Query: 1   MKPQPDVQG-HPGTMMAFQEDYVVNNELQGHCFQGFDKCEDSASGLHNPTVGISGLTTQL 59
           +KP+PDVQ    G  MAFQEDY+VN+  Q HC  GFD+C+ SA GL N       +TTQ 
Sbjct: 128 LKPEPDVQSLQAGNSMAFQEDYLVNHASQDHCLLGFDQCKGSAFGLQNTVANNLEMTTQS 187

Query: 60  DYSHLIFRQELENLLLDGVNGTEECEKDIGPNS---LPIIHPPPSAFMGPKCALWDCTRP 116
           DY+     Q+ ++ L  G  G   C +D  PN    LP I PPPSAF+GPKCALWDC RP
Sbjct: 188 DYNQFDMHQDFDHELFIGPMGL--CGQDGVPNIPGLLPNICPPPSAFLGPKCALWDCPRP 245

Query: 117 ALGSELFEDYCSNFHATLAVSEDSPGLTPVLRPGGINLKDSLLFNAVNARAQGKRVGIPH 176
           A GSE  +DYCS+FHA+LA++E  PG+TPVLRPGGI LKD  LF A++A+ QGK VGIP 
Sbjct: 246 AQGSEWCQDYCSSFHASLALNEGPPGMTPVLRPGGIGLKDGPLFAALSAKTQGKDVGIPE 305

Query: 177 CEGAATTKSPWNATELFDLALLEGETIREWLFFDKHRKAFESGTRKQRSLPDHSGRGWHE 236
           CEGAAT+KSPWNA ELFDL++LEGE IREWLFFDK R+AFESG RKQRSLPD+SGRGWHE
Sbjct: 306 CEGAATSKSPWNAPELFDLSVLEGEIIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHE 365

Query: 237 SRKLVMKEFGGQKRSYYMDPQPSDGLEWHLYEYEIIGFDAYALYRLEVKLASEKKSPKVK 296
           SRK VMKEFGG KRSYYMDPQP    EWHLYEYEI   DA ALYRLE+KL   KKSPK K
Sbjct: 366 SRKQVMKEFGGLKRSYYMDPQPLTCFEWHLYEYEINHCDACALYRLELKLVDGKKSPKGK 425

Query: 297 VTKDSLADLQKKMGRLTADVPVDNKSSFKGKIETNGKVDSANVNSSQNEMTSATEILHHG 356
           V  DSLADLQK+MGRLTA+ P D K S KG+ + N KV + N+ S+ N MT   E   +G
Sbjct: 426 VINDSLADLQKQMGRLTAEFPTDVKRSTKGRTKVNKKVGARNIYSAPNLMTPTAETFSYG 485

Query: 357 SSSPYKYLADNSADYYHK 374
            S  Y YL +N ADYY K
Sbjct: 486 LSGSYNYLPENLADYYGK 503

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302143373|emb|CBI21934.3| unnamed protein product [Vitis vinifera]

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 236/376 (62%), Positives = 273/376 (72%), Gaps = 6/376 (1%)

Query: 1   MKPQPDVQG-HPGTMMAFQEDYVVNNELQGHCFQGFDKCEDSASGLHNPTVGISGLTTQL 59
           +KP+PDVQ    G  MAFQEDY+VN+  Q HC  GFD+C+ SA GL N       +TTQ 
Sbjct: 79  LKPEPDVQSLQAGNSMAFQEDYLVNHASQDHCLLGFDQCKGSAFGLQNTVANNLEMTTQS 138

Query: 60  DYSHLIFRQELENLLLDGVNGTEECEKDIGPNS---LPIIHPPPSAFMGPKCALWDCTRP 116
           DY+     Q+ ++ L  G  G   C +D  PN    LP I PPPSAF+GPKCALWDC RP
Sbjct: 139 DYNQFDMHQDFDHELFIGPMGL--CGQDGVPNIPGLLPNICPPPSAFLGPKCALWDCPRP 196

Query: 117 ALGSELFEDYCSNFHATLAVSEDSPGLTPVLRPGGINLKDSLLFNAVNARAQGKRVGIPH 176
           A GSE  +DYCS+FHA+LA++E  PG+TPVLRPGGI LKD  LF A++A+ QGK VGIP 
Sbjct: 197 AQGSEWCQDYCSSFHASLALNEGPPGMTPVLRPGGIGLKDGPLFAALSAKTQGKDVGIPE 256

Query: 177 CEGAATTKSPWNATELFDLALLEGETIREWLFFDKHRKAFESGTRKQRSLPDHSGRGWHE 236
           CEGAAT+KSPWNA ELFDL++LEGE IREWLFFDK R+AFESG RKQRSLPD+SGRGWHE
Sbjct: 257 CEGAATSKSPWNAPELFDLSVLEGEIIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHE 316

Query: 237 SRKLVMKEFGGQKRSYYMDPQPSDGLEWHLYEYEIIGFDAYALYRLEVKLASEKKSPKVK 296
           SRK VMKEFGG KRSYYMDPQP    EWHLYEYEI   DA ALYRLE+KL   KKSPK K
Sbjct: 317 SRKQVMKEFGGLKRSYYMDPQPLTCFEWHLYEYEINHCDACALYRLELKLVDGKKSPKGK 376

Query: 297 VTKDSLADLQKKMGRLTADVPVDNKSSFKGKIETNGKVDSANVNSSQNEMTSATEILHHG 356
           V  DSLADLQK+MGRLTA+ P D K S KG+ + N KV + N+ S+ N MT   E   +G
Sbjct: 377 VINDSLADLQKQMGRLTAEFPTDVKRSTKGRTKVNKKVGARNIYSAPNLMTPTAETFSYG 436

Query: 357 SSSPYKYLADNSADYY 372
            S  Y YL +N ADYY
Sbjct: 437 LSGSYNYLPENLADYY 452

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225443564|ref|XP_002273268.1| PREDICTED: uncharacterized protein LOC100243518 [Vitis vinifera]

 Score =  439 bits (1130), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 226/377 (59%), Positives = 266/377 (70%), Gaps = 10/377 (2%)

Query: 2   KPQPDVQGHP-GTMMAFQEDYVVNNELQGHCFQGFDKCEDSASGLHNPTVGISGL--TTQ 58
           KP+PD QGH  G  + FQE Y  N   Q H FQ  D+C+ S SG HN  +G+  L   TQ
Sbjct: 111 KPEPDAQGHQIGASVLFQERY--NKGPQEHGFQLVDQCKISPSGAHN--MGVHNLEGATQ 166

Query: 59  LDYSHLIFRQELENLLLDGVNGTEECEKDIGPNS---LPIIHPPPSAFMGPKCALWDCTR 115
           LDY     +Q+ E     G +GT  C +D  P+    LP I  PPSAF+GPKCALWDC R
Sbjct: 167 LDYRQFDLQQDFEQNFFAGYDGTGLCGEDAMPHISSFLPSICLPPSAFLGPKCALWDCPR 226

Query: 116 PALGSELFEDYCSNFHATLAVSEDSPGLTPVLRPGGINLKDSLLFNAVNARAQGKRVGIP 175
           PA G +  ++YCS+FHATLA+SE  PG+TPVLRPGGI LKD LLF A++A+ QGK VGIP
Sbjct: 227 PAQGMDWCQNYCSSFHATLALSEGPPGMTPVLRPGGIGLKDGLLFAALSAKVQGKDVGIP 286

Query: 176 HCEGAATTKSPWNATELFDLALLEGETIREWLFFDKHRKAFESGTRKQRSLPDHSGRGWH 235
            CEGAAT KSPWNA ELFDL++LEGETIREWLFFDK R+AFESG RKQRSLPD+SGRGWH
Sbjct: 287 ECEGAATAKSPWNAPELFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWH 346

Query: 236 ESRKLVMKEFGGQKRSYYMDPQPSDGLEWHLYEYEIIGFDAYALYRLEVKLASEKKSPKV 295
           ESRK VM E+GG KRSYYMDPQP +  EWHLYEYEI   DA ALYRLE+KL   KKS K 
Sbjct: 347 ESRKQVMNEYGGLKRSYYMDPQPLNHFEWHLYEYEISKCDACALYRLELKLVDGKKSSKA 406

Query: 296 KVTKDSLADLQKKMGRLTADVPVDNKSSFKGKIETNGKVDSANVNSSQNEMTSATEILHH 355
           K T DS+ADLQK+MGRLTA+ P+DNK S KG+ + N K    +V S+ N +    +   +
Sbjct: 407 KATTDSVADLQKQMGRLTAEFPLDNKRSVKGRTKINMKDGVGDVYSTPNRVGPPNQQGDY 466

Query: 356 GSSSPYKYLADNSADYY 372
           G   PY YL +N  DYY
Sbjct: 467 GVGGPYDYLVENLGDYY 483

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740447|emb|CBI30629.3| unnamed protein product [Vitis vinifera]

 Score =  439 bits (1130), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 226/377 (59%), Positives = 266/377 (70%), Gaps = 10/377 (2%)

Query: 2   KPQPDVQGHP-GTMMAFQEDYVVNNELQGHCFQGFDKCEDSASGLHNPTVGISGL--TTQ 58
           KP+PD QGH  G  + FQE Y  N   Q H FQ  D+C+ S SG HN  +G+  L   TQ
Sbjct: 110 KPEPDAQGHQIGASVLFQERY--NKGPQEHGFQLVDQCKISPSGAHN--MGVHNLEGATQ 165

Query: 59  LDYSHLIFRQELENLLLDGVNGTEECEKDIGPNS---LPIIHPPPSAFMGPKCALWDCTR 115
           LDY     +Q+ E     G +GT  C +D  P+    LP I  PPSAF+GPKCALWDC R
Sbjct: 166 LDYRQFDLQQDFEQNFFAGYDGTGLCGEDAMPHISSFLPSICLPPSAFLGPKCALWDCPR 225

Query: 116 PALGSELFEDYCSNFHATLAVSEDSPGLTPVLRPGGINLKDSLLFNAVNARAQGKRVGIP 175
           PA G +  ++YCS+FHATLA+SE  PG+TPVLRPGGI LKD LLF A++A+ QGK VGIP
Sbjct: 226 PAQGMDWCQNYCSSFHATLALSEGPPGMTPVLRPGGIGLKDGLLFAALSAKVQGKDVGIP 285

Query: 176 HCEGAATTKSPWNATELFDLALLEGETIREWLFFDKHRKAFESGTRKQRSLPDHSGRGWH 235
            CEGAAT KSPWNA ELFDL++LEGETIREWLFFDK R+AFESG RKQRSLPD+SGRGWH
Sbjct: 286 ECEGAATAKSPWNAPELFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWH 345

Query: 236 ESRKLVMKEFGGQKRSYYMDPQPSDGLEWHLYEYEIIGFDAYALYRLEVKLASEKKSPKV 295
           ESRK VM E+GG KRSYYMDPQP +  EWHLYEYEI   DA ALYRLE+KL   KKS K 
Sbjct: 346 ESRKQVMNEYGGLKRSYYMDPQPLNHFEWHLYEYEISKCDACALYRLELKLVDGKKSSKA 405

Query: 296 KVTKDSLADLQKKMGRLTADVPVDNKSSFKGKIETNGKVDSANVNSSQNEMTSATEILHH 355
           K T DS+ADLQK+MGRLTA+ P+DNK S KG+ + N K    +V S+ N +    +   +
Sbjct: 406 KATTDSVADLQKQMGRLTAEFPLDNKRSVKGRTKINMKDGVGDVYSTPNRVGPPNQQGDY 465

Query: 356 GSSSPYKYLADNSADYY 372
           G   PY YL +N  DYY
Sbjct: 466 GVGGPYDYLVENLGDYY 482

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359485265|ref|XP_002278626.2| PREDICTED: uncharacterized protein LOC100262658 [Vitis vinifera]

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 220/338 (65%), Positives = 252/338 (74%), Gaps = 6/338 (1%)

Query: 1   MKPQPDVQG-HPGTMMAFQEDYVVNNELQGHCFQGFDKCEDSASGLHNPTVGISGLTTQL 59
           +KP+PDVQ    G  MAFQEDY+VN+  Q HC  GFD+C+ SA GL N       +TTQ 
Sbjct: 109 LKPEPDVQSLQAGNSMAFQEDYLVNHASQDHCLLGFDQCKGSAFGLQNTVANNLEMTTQS 168

Query: 60  DYSHLIFRQELENLLLDGVNGTEECEKDIGPNS---LPIIHPPPSAFMGPKCALWDCTRP 116
           DY+     Q+ ++ L  G  G   C +D  PN    LP I PPPSAF+GPKCALWDC RP
Sbjct: 169 DYNQFDMHQDFDHELFIGPMGL--CGQDGVPNIPGLLPNICPPPSAFLGPKCALWDCPRP 226

Query: 117 ALGSELFEDYCSNFHATLAVSEDSPGLTPVLRPGGINLKDSLLFNAVNARAQGKRVGIPH 176
           A GSE  +DYCS+FHA+LA++E  PG+TPVLRPGGI LKD  LF A++A+ QGK VGIP 
Sbjct: 227 AQGSEWCQDYCSSFHASLALNEGPPGMTPVLRPGGIGLKDGPLFAALSAKTQGKDVGIPE 286

Query: 177 CEGAATTKSPWNATELFDLALLEGETIREWLFFDKHRKAFESGTRKQRSLPDHSGRGWHE 236
           CEGAAT+KSPWNA ELFDL++LEGE IREWLFFDK R+AFESG RKQRSLPD+SGRGWHE
Sbjct: 287 CEGAATSKSPWNAPELFDLSVLEGEIIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHE 346

Query: 237 SRKLVMKEFGGQKRSYYMDPQPSDGLEWHLYEYEIIGFDAYALYRLEVKLASEKKSPKVK 296
           SRK VMKEFGG KRSYYMDPQP    EWHLYEYEI   DA ALYRLE+KL   KKSPK K
Sbjct: 347 SRKQVMKEFGGLKRSYYMDPQPLTCFEWHLYEYEINHCDACALYRLELKLVDGKKSPKGK 406

Query: 297 VTKDSLADLQKKMGRLTADVPVDNKSSFKGKIETNGKV 334
           V  DSLADLQK+MGRLTA+ P D K S KG+ + N KV
Sbjct: 407 VINDSLADLQKQMGRLTAEFPTDVKRSTKGRTKVNKKV 444

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255563002|ref|XP_002522505.1| conserved hypothetical protein [Ricinus communis] gi|223538196|gb|EEF39805.1| conserved hypothetical protein [Ricinus communis]

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 215/377 (57%), Positives = 257/377 (68%), Gaps = 8/377 (2%)

Query: 3   PQPDVQGHP---GTMMAFQEDYVVNNELQGHCFQGFDKCEDSASGLHNPTVGISGLTTQL 59
           P+P+   H    G  + FQE++ VN   Q H F   D+C++S SG+H   V       QL
Sbjct: 107 PKPEPNDHSLQIGNNVVFQEEFGVNQGQQNHSFPFVDQCKESPSGVHGMVVNNLEGGAQL 166

Query: 60  DYSHLIFRQELENLLLDGVNGTEECEKDIGPNS---LPIIHPPPSAFMGPKCALWDCTRP 116
           ++ H    Q  E+      N T+ C +D  P     LP I PPPSAF+GPKCALWDC RP
Sbjct: 167 EFHHFDLSQNYESNFYADFNSTDLCAEDGVPQVSGYLPSICPPPSAFLGPKCALWDCPRP 226

Query: 117 ALGS-ELFEDYCSNFHATLAVSEDSPGLTPVLRPGGINLKDSLLFNAVNARAQGKRVGIP 175
           A G  +  +DYCS+FH  LA++E  PG++PVLRPGGI LKD LLF A++A+AQGK VGIP
Sbjct: 227 AQGGLDWCQDYCSSFHHALALNEGPPGMSPVLRPGGIGLKDGLLFAALSAKAQGKDVGIP 286

Query: 176 HCEGAATTKSPWNATELFDLALLEGETIREWLFFDKHRKAFESGTRKQRSLPDHSGRGWH 235
            CEGAAT KSPWNA ELFDL++LEGETIREWLFFDK R+AFESG RKQRSLPD+SGRGWH
Sbjct: 287 ECEGAATAKSPWNAPELFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWH 346

Query: 236 ESRKLVMKEFGGQKRSYYMDPQPSDGLEWHLYEYEIIGFDAYALYRLEVKLASEKKSPKV 295
           ESRK VM EFGG KRSYYMDPQP +  EWHLYEYEI   DA ALYRLE+K    KK  K 
Sbjct: 347 ESRKQVMNEFGGLKRSYYMDPQPLNTFEWHLYEYEINKCDACALYRLELKAVDGKKGAKG 406

Query: 296 KVTKDSLADLQKKMGRLTADVPVDNKSSFKGKIETNGKVDSANVNSSQNEMTSATEILHH 355
           K+T +S+ADLQK+MGRLTA+ P DNK S KG+ + + KV   NV S+ N +    E   +
Sbjct: 407 KITNESVADLQKQMGRLTAEFPSDNKRSVKGRTKVSVKVGVGNVYSTTNRVVPTNETYDY 466

Query: 356 GSSSPYKYLADNSADYY 372
               PY YL DN  DYY
Sbjct: 467 -ELGPYNYLVDNLGDYY 482

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224146515|ref|XP_002326034.1| predicted protein [Populus trichocarpa] gi|222862909|gb|EEF00416.1| predicted protein [Populus trichocarpa]

 Score =  420 bits (1079), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 211/332 (63%), Positives = 247/332 (74%), Gaps = 2/332 (0%)

Query: 2   KPQPDVQG-HPGTMMAFQEDYVVNNELQGHCFQGFDKCEDSASGLHNPTVGISGLTTQLD 60
           +P+P+ Q  + G +  FQ++Y+VN+  Q   FQGF +  + +SGL N  V    +TT LD
Sbjct: 114 QPEPNFQNLNLGNLTTFQDEYLVNSHSQELGFQGFHQ-PNGSSGLQNVAVSDPDITTLLD 172

Query: 61  YSHLIFRQELENLLLDGVNGTEECEKDIGPNSLPIIHPPPSAFMGPKCALWDCTRPALGS 120
                  +E +     G N T+EC  +   N+L  I PPPSAFMGPKCALWDCTRPA G+
Sbjct: 173 CHQFTLDEEFDPGHFVGTNDTKECGINSESNNLQYISPPPSAFMGPKCALWDCTRPAQGA 232

Query: 121 ELFEDYCSNFHATLAVSEDSPGLTPVLRPGGINLKDSLLFNAVNARAQGKRVGIPHCEGA 180
           E  EDYCS+FHATLA++E  PG+TPVLRP GINLKD+LLF+A+ A+ QGK VGIP CEGA
Sbjct: 233 EWCEDYCSSFHATLALNEGPPGMTPVLRPRGINLKDNLLFDALTAKMQGKNVGIPQCEGA 292

Query: 181 ATTKSPWNATELFDLALLEGETIREWLFFDKHRKAFESGTRKQRSLPDHSGRGWHESRKL 240
           A  KSPWNA ELFDL+LLEGETIREWLFFDK R+AF+SG RKQRSLPD+SGRGWHESRK 
Sbjct: 293 AVMKSPWNAAELFDLSLLEGETIREWLFFDKPRRAFDSGNRKQRSLPDYSGRGWHESRKQ 352

Query: 241 VMKEFGGQKRSYYMDPQPSDGLEWHLYEYEIIGFDAYALYRLEVKLASEKKSPKVKVTKD 300
           VMKE GG+K+SYYMDPQP    EWHLYEYEI   DA ALYRLE KLA  KK+PK KV+KD
Sbjct: 353 VMKELGGKKKSYYMDPQPPGCHEWHLYEYEINNCDACALYRLEFKLADGKKTPKGKVSKD 412

Query: 301 SLADLQKKMGRLTADVPVDNKSSFKGKIETNG 332
           SL DLQKKMGRLTA V  DN  S KGK  T+G
Sbjct: 413 SLVDLQKKMGRLTAVVTADNSPSDKGKTNTSG 444

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356521424|ref|XP_003529356.1| PREDICTED: uncharacterized protein LOC100798565 [Glycine max]

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 213/375 (56%), Positives = 257/375 (68%), Gaps = 11/375 (2%)

Query: 2   KPQPDVQG-HPGTMMAFQEDYVVNNELQGHCFQGFDKCEDSASGLHNPTVGISGLTTQLD 60
           KP+P+ Q    G  + FQE        Q H F   D+C+ S S + N     +     L+
Sbjct: 108 KPEPNDQTLQAGGKVMFQEGQ------QQHYFPLVDECKHSTSSVQN-VAANNPDGHALE 160

Query: 61  YSHLIFRQELENLLLDGVNGTEECEKDIGP---NSLPIIHPPPSAFMGPKCALWDCTRPA 117
           Y      Q+ ++ L  G NGT  CE+D  P   + LP I PPPSAF+GPKCALWDC RPA
Sbjct: 161 YHQFDLHQDYDHGLYTGFNGTGYCEEDAIPHISSYLPSICPPPSAFLGPKCALWDCPRPA 220

Query: 118 LGSELFEDYCSNFHATLAVSEDSPGLTPVLRPGGINLKDSLLFNAVNARAQGKRVGIPHC 177
            G +  +DYCS+FHA LA++E  PG+ PVLRPGGI LKD+LLF A++A+AQGK VGIP C
Sbjct: 221 QGLDWCQDYCSSFHAALALNEGPPGMAPVLRPGGIGLKDNLLFAALSAKAQGKDVGIPEC 280

Query: 178 EGAATTKSPWNATELFDLALLEGETIREWLFFDKHRKAFESGTRKQRSLPDHSGRGWHES 237
           EGAAT KSPWNA ELFDL++LEGETIREWLFFDK R+AFESG RKQRSLPD+SGRGWHES
Sbjct: 281 EGAATAKSPWNAPELFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHES 340

Query: 238 RKLVMKEFGGQKRSYYMDPQPSDGLEWHLYEYEIIGFDAYALYRLEVKLASEKKSPKVKV 297
           RK VM EFGG KRSYYMDPQP +  EWHLYEYEI   DA ALYRLE+KL   KK+ K K 
Sbjct: 341 RKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEISKCDACALYRLELKLVDGKKNSKTKA 400

Query: 298 TKDSLADLQKKMGRLTADVPVDNKSSFKGKIETNGKVDSANVNSSQNEMTSATEILHHGS 357
             DS+ADLQK+MGRL+A+ P DNK + KG+ + N KV    V  + + +T       +G 
Sbjct: 401 ANDSVADLQKQMGRLSAEFPHDNKRAAKGRAKINAKVGIGGVYPASHRVTPLNGTYEYGL 460

Query: 358 SSPYKYLADNSADYY 372
           ++PY YL DN  DYY
Sbjct: 461 AAPYDYLVDNMGDYY 475

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|295841593|dbj|BAJ07177.1| MdVOZ1 [Malus x domestica]

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 210/375 (56%), Positives = 251/375 (66%), Gaps = 5/375 (1%)

Query: 2   KPQPDVQG-HPGTMMAFQEDYVVNNELQGHCFQGFDKCEDSASGLHNPTVGISGLTTQLD 60
           K +P+ Q    G  + F E + VN   Q H F   D+C+ S SG+ N    + G   QLD
Sbjct: 108 KSEPNDQNLQVGESLVFHEGFSVNQGQQEHAFPLADQCKSSPSGVRNAVNNLEG-ANQLD 166

Query: 61  YSHLIFRQELENLLLDGVNGTEECEKDI---GPNSLPIIHPPPSAFMGPKCALWDCTRPA 117
           Y      Q+ E       +GT    +DI       LP I PPPSAF+GPKCALWDC RPA
Sbjct: 167 YHQFELHQDFEQSFYPCFHGTALRGEDILSQASTYLPSIFPPPSAFLGPKCALWDCPRPA 226

Query: 118 LGSELFEDYCSNFHATLAVSEDSPGLTPVLRPGGINLKDSLLFNAVNARAQGKRVGIPHC 177
            G + + DYCS+FHA LA++E  PG+ PVLRPGGI LKD LLF A++A+AQGK VGIP C
Sbjct: 227 QGLDWWLDYCSSFHAALALNEGPPGMGPVLRPGGIGLKDGLLFAALSAKAQGKGVGIPEC 286

Query: 178 EGAATTKSPWNATELFDLALLEGETIREWLFFDKHRKAFESGTRKQRSLPDHSGRGWHES 237
           EGAAT KSPWNA E FDL++LEGE IREWLFFDK R+AFESG RKQRSLPD++GRGWHES
Sbjct: 287 EGAATAKSPWNAPEFFDLSVLEGEIIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHES 346

Query: 238 RKLVMKEFGGQKRSYYMDPQPSDGLEWHLYEYEIIGFDAYALYRLEVKLASEKKSPKVKV 297
           RK VM EFGG KRSYYMDPQP +  EWHLYEYEI   DA ALYRLE+KL   KK+ K K+
Sbjct: 347 RKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEINKCDACALYRLELKLVDGKKNSKSKL 406

Query: 298 TKDSLADLQKKMGRLTADVPVDNKSSFKGKIETNGKVDSANVNSSQNEMTSATEILHHGS 357
           T DS+ADLQK+MGRL+A+ P DNK + KG+ + N KV   NV  + N   +      +  
Sbjct: 407 TNDSVADLQKQMGRLSAEFPSDNKRTVKGRAKVNAKVSVGNVYYAPNRGATTNGTFDYEI 466

Query: 358 SSPYKYLADNSADYY 372
            +PY YL DN   YY
Sbjct: 467 GAPYDYLVDNVNGYY 481

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224122038|ref|XP_002330715.1| predicted protein [Populus trichocarpa] gi|222872319|gb|EEF09450.1| predicted protein [Populus trichocarpa]

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 205/332 (61%), Positives = 238/332 (71%), Gaps = 10/332 (3%)

Query: 1   MKPQPDVQG-HPGTMMAFQEDYVVNNELQGHCFQGFDKCEDSASGLHNPTVGISGLTTQL 59
           M+P+P+ Q  +PG +  FQ          G  FQGF +   SASGL N  V    +TT L
Sbjct: 113 MQPEPNFQNLNPGNLTTFQ---------HGLGFQGFHQPNSSASGLQNVVVSAPDITTLL 163

Query: 60  DYSHLIFRQELENLLLDGVNGTEECEKDIGPNSLPIIHPPPSAFMGPKCALWDCTRPALG 119
           D       +E +  L  G N  EEC K+   N+L  I PPPSAFMGPKCALWDCTRPA  
Sbjct: 164 DCQQFTLDEEFDPGLFGGTNDIEECGKNAESNNLQYISPPPSAFMGPKCALWDCTRPAQV 223

Query: 120 SELFEDYCSNFHATLAVSEDSPGLTPVLRPGGINLKDSLLFNAVNARAQGKRVGIPHCEG 179
           +E  EDYCS+FHATLA++E  PG+ PVLRP GINLKD+LLF+A+ A+ QGK VGIP CEG
Sbjct: 224 AEWLEDYCSSFHATLALNEGPPGMAPVLRPRGINLKDNLLFDALIAKMQGKNVGIPQCEG 283

Query: 180 AATTKSPWNATELFDLALLEGETIREWLFFDKHRKAFESGTRKQRSLPDHSGRGWHESRK 239
           AA  KSPWNA ELFDL+LL+GETIREWLFFDK R+AF+SG RKQRSLPD++GRGWHESRK
Sbjct: 284 AAVMKSPWNAAELFDLSLLDGETIREWLFFDKPRRAFDSGNRKQRSLPDYNGRGWHESRK 343

Query: 240 LVMKEFGGQKRSYYMDPQPSDGLEWHLYEYEIIGFDAYALYRLEVKLASEKKSPKVKVTK 299
            VMKE GGQK+SYYMDPQP    EWHL+EYEI   D  ALYRLE+KL + K+SPK KV+K
Sbjct: 344 QVMKELGGQKKSYYMDPQPPGCHEWHLFEYEINKCDLCALYRLELKLTNGKRSPKGKVSK 403

Query: 300 DSLADLQKKMGRLTADVPVDNKSSFKGKIETN 331
           D LADLQKKMGRLTA V  DN    KGK   +
Sbjct: 404 DPLADLQKKMGRLTAVVTADNGPPLKGKTNAD 435

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	375
TAIR|locus:2018738	486	VOZ1 "AT1G28520" [Arabidopsis	0.957	0.738	0.530	2.2e-96
TAIR|locus:2053786	450	VOZ2 "AT2G42400" [Arabidopsis	0.794	0.662	0.589	1.7e-91

TAIR|locus:2018738 VOZ1 "AT1G28520" [Arabidopsis thaliana (taxid:3702)]

 Score = 958 (342.3 bits), Expect = 2.2e-96, P = 2.2e-96
 Identities = 206/388 (53%), Positives = 245/388 (63%)

Query:     2 KPQPDVQG-HPGTMMAFQEDYVVNNELQGHCFQGF---DKCEDSASGLHNPTVGISGLTT 57
             KP+P  Q    G    FQ  Y   N +QG    G    D C+D +    N   G + L  
Sbjct:   109 KPEPADQNLEAGKAAVFQRGY---NLVQGKSEHGLPLVDNCKDLSLAAGNNFDGTAPLEY 165

Query:    58 QLDYSHLIFRQELENLLLDGVNGTEECEKDIGP----NSLPIIHPPPSAFMGPKCALWDC 113
                Y     +QE E     G N         GP    N +P I PPPSAF+GPKCALWDC
Sbjct:   166 HQQYD---LQQEFEPNFNGGFNNCPSYGVVEGPIHISNFIPTICPPPSAFLGPKCALWDC 222

Query:   114 TRPALGSELFEDYCSNFHATLAVSEDSPGLTPVLRPGGINLKDSLLFNAVNARAQGKRVG 173
              RPA G + F+DYCS+FHA LA +E  PG+ PV+RPGGI LKD LLF A++A+A GK VG
Sbjct:   223 PRPAQGFDWFQDYCSSFHAALAFNEGPPGMNPVVRPGGIGLKDGLLFAALSAKAGGKDVG 282

Query:   174 IPHCEGAATTKSPWNATELFDLALLEGETIREWLFFDKHRKAFESGTRKQRSLPDHSGRG 233
             IP CEGAAT KSPWNA ELFDL +LE ET+REWLFFDK R+AFESG RKQRSLPD++GRG
Sbjct:   283 IPECEGAATAKSPWNAPELFDLTVLESETLREWLFFDKPRRAFESGNRKQRSLPDYNGRG 342

Query:   234 WHESRKLVMKEFGGQKRSYYMDPQPSDGLEWHLYEYEIIGFDAYALYRLEVKLASEKKSP 293
             WHESRK +M EFGG KRSYYMDPQP    EWHLYEYEI   DA ALYRLE+KL   KK+ 
Sbjct:   343 WHESRKQIMVEFGGLKRSYYMDPQPLHHFEWHLYEYEINKCDACALYRLELKLVDGKKTS 402

Query:   294 KVKVTKDSLADLQKKMGRLTADVPVDN---------KSSFKGKIETNGKVDSANVNSSQN 344
             K KV+ DS+ADLQK+MGRLTA+ P +N         K   KG+ + + KV + NV   QN
Sbjct:   403 KGKVSNDSVADLQKQMGRLTAEFPPENNTTNTTNNNKRCIKGRPKVSTKVATGNV---QN 459

Query:   345 EMTSATEILHHGSSSPYKYLADNSADYY 372
              +  A +   +G    + YL  N +DYY
Sbjct:   460 TVEQAND---YGVGEEFNYLVGNLSDYY 484

GO:0005575 "cellular_component" evidence=ND

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0009610 "response to symbiotic fungus" evidence=RCA

GO:0005515 "protein binding" evidence=IPI

GO:0048574 "long-day photoperiodism, flowering" evidence=IMP

GO:0048578 "positive regulation of long-day photoperiodism, flowering" evidence=IMP

TAIR|locus:2053786 VOZ2 "AT2G42400" [Arabidopsis thaliana (taxid:3702)]

 Score = 912 (326.1 bits), Expect = 1.7e-91, P = 1.7e-91
 Identities = 181/307 (58%), Positives = 224/307 (72%)

Query:    19 EDYVVNNELQG---HC-FQGFDKCEDSASGLHNPTVGIS-GLTTQLDYSHLIFRQELENL 73
             ED + + E  G   H  ++GFD   +SA   H+  +  +  +T+Q DY     RQEL+N 
Sbjct:   136 EDALNSTETHGQQLHYGYEGFDPSINSAPDFHDQKLSSNLDITSQYDYIFSEVRQELDNS 195

Query:    74 LLDGVNGTEECEKDIGPNSLPI-IHPPPSAFMGPKCALWDCTRPALGSELFEDYCSNFHA 132
                 ++ +EE + +    S P  +  PPSAF+GPKCALWDCTRPA GSE + DYCSN+H 
Sbjct:   196 PSTKLDSSEEID-NFAEFSTPSSVRVPPSAFLGPKCALWDCTRPAQGSEWYLDYCSNYHG 254

Query:   133 TLAVSEDSPGLTPVLRPGGINLKDSLLFNAVNARAQGKRVGIPHCEGAATTKSPWNATEL 192
             TLA++EDSPG  PVLRPGGI+LKD+LL +A+ A+ QGK VGIP CEGA  TK PWNA EL
Sbjct:   255 TLALNEDSPGTAPVLRPGGISLKDNLLIDALRAKTQGKNVGIPVCEGAVNTKCPWNAAEL 314

Query:   193 FDLALLEGETIREWLFFDKHRKAFESGTRKQRSLPDHSGRGWHESRKLVMKEFGGQKRSY 252
             F L L+EGETIREWLFFDK R+A++SG RKQRSLPD+SGRGWHESRK +MKE  GQKRSY
Sbjct:   315 FHLELVEGETIREWLFFDKPRRAYDSGNRKQRSLPDYSGRGWHESRKQLMKEQEGQKRSY 374

Query:   253 YMDPQPSDGLEWHLYEYEIIGFDAYALYRLEVKLASEKKSPKVKVTKDSLADLQKKMG-- 310
             YMDPQP    EWHL+EY+I   DA ALYRLE+K+ + KKSPK K++KD LADLQKKMG  
Sbjct:   375 YMDPQPPGPFEWHLFEYQINESDACALYRLELKVGNGKKSPKGKISKDPLADLQKKMGQF 434

Query:   311 RLTADVP 317
             ++ +D P
Sbjct:   435 KVASDKP 441


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.133   0.406    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      375       375   0.00088  117 3  11 23  0.45    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  617 (66 KB)
  Total size of DFA:  269 KB (2142 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  33.48u 0.12s 33.60t   Elapsed:  00:00:01
  Total cpu time:  33.48u 0.12s 33.60t   Elapsed:  00:00:01
  Start:  Fri May 10 22:27:27 2013   End:  Fri May 10 22:27:28 2013

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0048574 "long-day photoperiodism, flowering" evidence=IMP

GO:0048578 "positive regulation of long-day photoperiodism, flowering" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SGQ0	VOZ1_ARATH	No assigned EC number	0.5272	0.9653	0.7448	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00018680001 SubName- Full=Chromosome chr12 scaffold_18, whole genome shotgun sequence; (484 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	375
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	94.78

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=94.78  E-value=0.00094  Score=54.27  Aligned_cols=100  Identities=24%  Similarity=0.563  Sum_probs=53.8

Q ss_pred             HHHHhhhcCcccC----cccccCCcccCCCCChhhhhhhhhccchhhhhhhhhhhhhhhhhcccccccCCCCCCCCChhh
Q 017220          161 NAVNARAQGKRVG----IPHCEGAATTKSPWNATELFDLALLEGETIREWLFFDKHRKAFESGTRKQRSLPDHSGRGWHE  236 (375)
Q Consensus       161 aAL~Ak~qGk~VG----IP~CeGAat~KsPWNA~elFdl~~legEtiREWLFFDkpRRAfeSGnRKQRslPDy~GRGWHE  236 (375)
                      .-|..|+.|...-    |++|  -.-+..||.-|+.++.    ++  +||+||=+.++....|+|+.|+-.   |=-||.
T Consensus        17 ~yL~~k~~g~~~~~~~~i~~~--Diy~~~P~~L~~~~~~----~~--~~~yFF~~~~~~~~~~~r~~R~~~---~G~Wk~   85 (129)
T PF02365_consen   17 HYLRPKILGEPLPCEDVIHDV--DIYSAHPWELPAKFKG----GD--EEWYFFSPRKKKYPNGGRPNRVTG---GGYWKS   85 (129)
T ss_dssp             CTHHHHHTT-HHCS-CHSEE----GGGS-GGGCHHHSSS-----S--SEEEEEEE----------S-EEET---TEEEEE
T ss_pred             HHHHHHhcCCCCCcccceeec--ccCccChHHhhhhccC----CC--ceEEEEEecccccCCccccccccc---ceEEee
Confidence            4577778777522    4444  5667799988852222    22  399999999999999999999755   444997


Q ss_pred             hHH--HHHH---HhcCcccc--cccCCCC-CCCcceeeEEEEe
Q 017220          237 SRK--LVMK---EFGGQKRS--YYMDPQP-SDGLEWHLYEYEI  271 (375)
Q Consensus       237 SRK--qvMk---e~gGlKrS--YYMDPQP-~~~~EWHlyEYei  271 (375)
                      +.+  .|+.   ..-|.||+  ||.-.++ ...-.|-|.||.|
T Consensus        86 ~g~~~~i~~~~g~~iG~k~~l~f~~~~~~~~~kt~W~M~EY~L  128 (129)
T PF02365_consen   86 TGKEKPIKDPGGKVIGFKKTLVFYSGKSPNGKKTGWVMHEYSL  128 (129)
T ss_dssp             ECEEEEEEE-TTCEEEEEEEEEEEESSTTS-EEEEEEEEEEEE
T ss_pred             cccccccccccceeeeeEEEEEEEeccCCCCCcCCeEEEEEEe
Confidence            665  3333   23456664  6643333 3356899999987

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	375
1ut7_A	171	No apical meristem protein; transcription regulati	96.26
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	92.66

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=96.26  E-value=0.0011  Score=57.19  Aligned_cols=126  Identities=25%  Similarity=0.487  Sum_probs=76.9

Q ss_pred             CCchhhHH-HHHhhhcCcccC---cccccCCcccCCCCChhhhhhhhhccchhhhhhhhhhhhhhhhhcccccccCCCCC
Q 017220          154 LKDSLLFN-AVNARAQGKRVG---IPHCEGAATTKSPWNATELFDLALLEGETIREWLFFDKHRKAFESGTRKQRSLPDH  229 (375)
Q Consensus       154 LKDg~LFa-AL~Ak~qGk~VG---IP~CeGAat~KsPWNA~elFdl~~legEtiREWLFFDkpRRAfeSGnRKQRslPDy  229 (375)
                      -.|--|.. -|..|+.|...-   |+++.  .-...||+=|+..   . .|+  +||+||-.-.|....|.|..|.--  
T Consensus        25 PTDeELv~~YL~~K~~g~~~~~~~I~e~D--iy~~~Pw~Lp~~~---~-~g~--~ewyFFs~r~~k~~~g~R~~R~t~--   94 (171)
T 1ut7_A           25 PTDEELMVQYLCRKAAGYDFSLQLIAEID--LYKFDPWVLPNKA---L-FGE--KEWYFFSPRDRKYPNGSRPNRVAG--   94 (171)
T ss_dssp             CCHHHHHHHTHHHHHTTCCCSSCCSEECC--GGGSCGGGHHHHS---S-SCS--SEEEEEEECCC-------CCEEET--
T ss_pred             CChHHHHHHHHHHHhcCCCCCCCeEeecc--cccCChhHhhchh---h-cCC--ccEEEEeccccccCCCCcccccCC--
Confidence            35666665 488999998765   44443  4567899877753   2 344  799999988889999999999751  


Q ss_pred             CCCChhhhHH--HHHH--HhcCcccc--cccCCCCCC-CcceeeEEEEeeCc---------ceeeeeeeeeeecccc
Q 017220          230 SGRGWHESRK--LVMK--EFGGQKRS--YYMDPQPSD-GLEWHLYEYEIIGF---------DAYALYRLEVKLASEK  290 (375)
Q Consensus       230 ~GRGWHESRK--qvMk--e~gGlKrS--YYMDPQP~~-~~EWHlyEYein~~---------da~ALYRLE~K~~d~k  290 (375)
                       +==||-.-+  .|+.  ..-|.|++  ||..-.|.+ .-.|-|.||.|...         +...|.|+-.|....+
T Consensus        95 -~G~Wk~tG~~k~I~~~~~~vG~KktLvFy~g~~p~g~kT~WvMhEY~l~~~~~~~~~~~~~~~VlCrv~~k~~~~~  170 (171)
T 1ut7_A           95 -SGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQSSAQ  170 (171)
T ss_dssp             -TEEEEEEEEEEEEEETTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC--------CCEEEEEEEECC----
T ss_pred             -CCEEeccCCCceEEecCcEEEEEEEEEEEcCcCCCCCcCCeEEEEEEcCCCccccCcccCCCEEEEEEEEcCCCCC
Confidence             223765432  1221  23366764  687655543 57899999999754         5788999887765443

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=92.66  E-value=0.063  Score=46.68  Aligned_cols=121  Identities=27%  Similarity=0.521  Sum_probs=74.0

Q ss_pred             CchhhHH-HHHhhhcCcccC---cccccCCcccCCCCChhhhhhhhhccchhhhhhhhhhhhhhhhhcccccccCCCCCC
Q 017220          155 KDSLLFN-AVNARAQGKRVG---IPHCEGAATTKSPWNATELFDLALLEGETIREWLFFDKHRKAFESGTRKQRSLPDHS  230 (375)
Q Consensus       155 KDg~LFa-AL~Ak~qGk~VG---IP~CeGAat~KsPWNA~elFdl~~legEtiREWLFFDkpRRAfeSGnRKQRslPDy~  230 (375)
                      .|--|.. -|.-|+.|...-   |+++.  .-...||+=|+..   . .|+  +||+||-.-.|.+..|.|..|.--   
T Consensus        24 TDeELV~~YL~~K~~g~~~~~~~I~evD--vy~~~Pw~Lp~~~---~-~g~--~ewYFFs~r~~ky~~g~R~nR~t~---   92 (174)
T 3ulx_A           24 TDDELVEHYLCRKAAGQRLPVPIIAEVD--LYKFDPWDLPERA---L-FGA--REWYFFTPRDRKYPNGSRPNRAAG---   92 (174)
T ss_dssp             CHHHHHHHTHHHHHHTCCCSSSCCEECC--GGGSCGGGSGGGC---S-SCS--SEEEEEEECCC-----CCSCEEET---
T ss_pred             CHHHHHHHHHHHHhcCCCCCcCeeeecc--cccCCchhhhhhh---c-cCC--ceEEEEeccccccCCCCCceeecC---
Confidence            4555554 577888887543   44443  3457899877653   2 354  699999877788999999988741   


Q ss_pred             CCChhhhHH--HHHH--HhcCcccc--cccCCCCCC-CcceeeEEEEeeCc--------------ceeeeeeeeeee
Q 017220          231 GRGWHESRK--LVMK--EFGGQKRS--YYMDPQPSD-GLEWHLYEYEIIGF--------------DAYALYRLEVKL  286 (375)
Q Consensus       231 GRGWHESRK--qvMk--e~gGlKrS--YYMDPQP~~-~~EWHlyEYein~~--------------da~ALYRLE~K~  286 (375)
                      +==||-.-+  .|..  ..-|.||+  ||..-.|.+ .-.|-|.||.|...              |...|.|+=.|.
T Consensus        93 ~G~WkatG~dk~I~~~g~~vG~KktLvFy~g~~p~g~kT~WvMhEY~L~~~~~~~~~~~~~~~~~~~wVlCrvf~K~  169 (174)
T 3ulx_A           93 NGYWKATGADKPVAPRGRTLGIKKALVFYAGKAPRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKK  169 (174)
T ss_dssp             TEEEEECSCCEEECCSSSCCEEEEEEEEEESSTTSCEEEEEEEEEEEECSCC-----------CCSSEEEEEEEESC
T ss_pred             CceEccCCCCcEEeeCCcEEEEEEEEEEecCCCCCCCcCCeEEEEEEeCCCCCcccccccCCCCCCCEEEEEEEEcC
Confidence            223664322  2321  23467774  787666543 46799999999764              456777776554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	375
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	93.51

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.51  E-value=0.0033  Score=50.95  Aligned_cols=119  Identities=22%  Similarity=0.465  Sum_probs=67.7

Q ss_pred             CCchhhHHH-HHhhhcCcccC---cccccCCcccCCCCChhhhhhhhhccchhhhhhhhhhhhhhhhhcccccccCCCCC
Q 017220          154 LKDSLLFNA-VNARAQGKRVG---IPHCEGAATTKSPWNATELFDLALLEGETIREWLFFDKHRKAFESGTRKQRSLPDH  229 (375)
Q Consensus       154 LKDg~LFaA-L~Ak~qGk~VG---IP~CeGAat~KsPWNA~elFdl~~legEtiREWLFFDkpRRAfeSGnRKQRslPDy  229 (375)
                      -.|-=|..- |.-|+.|...-   |++|.  .....||.-|+....    |  -.||+||=.=.+...+|.|+.|.-.  
T Consensus        25 PTDeELv~~YL~~Ki~g~~l~~~~I~~~D--vy~~~Pw~Lp~~~~~----~--~~~wyFft~~~~k~~~g~r~~R~~g--   94 (166)
T d1ut7a_          25 PTDEELMVQYLCRKAAGYDFSLQLIAEID--LYKFDPWVLPNKALF----G--EKEWYFFSPRDRKYPNGSRPNRVAG--   94 (166)
T ss_dssp             CCHHHHHHHTHHHHHTTCCCSSCCSEECC--GGGSCGGGHHHHSSS----C--SSEEEEEEECCC-------CCEEET--
T ss_pred             CCcHHHHHHHHHHHHcCCCCCcccceecc--CCcCChhhccchhcc----C--cceEEEEeeeccccCCCCccccccC--
Confidence            357777764 88888886542   55553  446789987765421    2  3579999655566778888888642  


Q ss_pred             CCCChhhhHH-HHHHH---hcCcccc--cccCCCCCCC-cceeeEEEEeeCcc---------eeeeeeee
Q 017220          230 SGRGWHESRK-LVMKE---FGGQKRS--YYMDPQPSDG-LEWHLYEYEIIGFD---------AYALYRLE  283 (375)
Q Consensus       230 ~GRGWHESRK-qvMke---~gGlKrS--YYMDPQP~~~-~EWHlyEYein~~d---------a~ALYRLE  283 (375)
                       |--||-+-+ .++..   --|.||+  ||.--+|.+. -.|.|.||.|....         .++|+|+=
T Consensus        95 -~G~Wk~~g~~~~i~~~g~~vG~kk~l~fy~~~~~~~~~t~W~M~EY~l~~~~~~~~~~~~~~~VLCrI~  163 (166)
T d1ut7a_          95 -SGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIY  163 (166)
T ss_dssp             -TEEEEEEEEEEEEEETTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC--------CCEEEEEEE
T ss_pred             -CCEecccCCCceEecCCcEEEEEEEEEEEecCCCCCCccCeEEEEEecCCcccccCccccCCEEEEEEE
Confidence             224775432 12211   1245664  4765444433 46999999997643         46777773