Citrus Sinensis ID: 017240

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-----
MEYYCLGARNFAAMAVSPFPTGRTRRKALRVRTKQSAVDCNHSSYKVTARATSNNAGSESCVAVKEEDYIKAGGSQLVFVQMQQNKSMDKQSKLADKLPPISIGNGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGRVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKLLEYEEWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHDHSRGRLTHEQSNENISMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTFFRLPKWY
ccEEEcccccccHHcccccccccccHHHHHccccccccccccccccccccccccccccccEEEcccccHHHcccccccHHHccccccccccccccccccccccccccEEEEEEcccHHHHHHHHHHHHcccEEEEEcccccccccccccHHHHHcccccccccccccccEEEEcccccEEEcccEEEEcHHHHHHHHHHHHHHcccEEEcccEEEEEEccccEEEEEEccccEEEEEEEEEcccccccccEEEcccccccccccccccccccccccccccccccccEEEEEEEccccccHHHHHHHHHHcccccccccccccHHHHHHcccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHccccccc
ccEEEEcHHHHHHHHHcccccccccHHHHHHHcccccHccccccEEEEEEEcEccccccEEEEEcHHHHEEcccccEcccccccccccccccccccccccccccccEEEEEEEcccHHHHHHHHHHHHcccEEEEEccccccccccEEEHHHHHHccHHHHHHHcccccEEEEccccccEccccccEEcHHHHHHHHHHHHHHcccEEEEcEEEEEEEccccccccccccccHHHHHHHHHHccccEEEEEEEccEEEEccccccccccccEEEEccccccccHHHHHHHHHHHHcccccHHHEHHEccccccHcccccccccHHHHHcccccccccccccccEEEEHcHHHHHcccHHHHHHHHHHHHcccccc
meyyclgarnfaamavspfptgrtrRKALRVRtkqsavdcnhssykvtaratsnnagsescvavkeedyikagGSQLVFVQMQQNKsmdkqskladklppisigngiLDLVVIGCGPAGLALAAESAKLGlnvgligpdlpftnnygvweDEFRDLGLEGCIEHVWrdtvvyidedepiligraYGRVSRHLLHEELLRRCVESGVSYLSSKVEsitestsghrlvacehdmivpcrlatvasgaasgklleyeewsyipvggslpnteqrNLAFGAaasmvhpatgySVVRSLSEAPNYASAIAYILKhdhsrgrltheqsneNISMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTFFRLPKWY
MEYYClgarnfaamavspfptgrtrrkalrvrtkqsavdcnhssykvtaratsnnagsescVAVKEEDYIKAGGSQLVFVQMQQNKSMDKQSKLADKLPPISIGNGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGRVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKLLEYEEWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHDHSRGRLTHEQSNENISMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTFFRLPKWY
MEYYCLGARNFAAMAVSPFPTGRTRRKALRVRTKQSAVDCNHSSYKVTARATSNNAGSESCVAVKEEDYIKAGGSQLVFVQMQQNKSMDKQSKLADKLPPISIGNGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGRVSrhllheellrrCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKLLEYEEWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHDHSRGRLTHEQSNENISMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTFFRLPKWY
**YYCLGARNFAAMAVSPF*****************************************CVAVKEEDYIKAGGSQLVFV******************PPISIGNGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGRVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKLLEYEEWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHD**************ISMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTFFRLPKW*
***YC*GARNFAAMAVSPFPTGR***********************************************KAGGSQLVF*******************PPISIGNGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGRVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKLLEYEEWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHDHS**************MQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTFFRLPKWY
MEYYCLGARNFAAMAVSPFPTG*******************HSSYKVT************CVAVKEEDYIKAGGSQLVFVQMQ**********LADKLPPISIGNGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGRVSRHLLHEELLRRCVESGV***************GHRLVACEHDMIVPCRLATVASGAASGKLLEYEEWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHDHSRGRLTHEQSNENISMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTFFRLPKWY
*EYYCLGARNFAAMAVSPFPTGRTRRKALRVRTKQSAVDCNHSSYKVTARATSNNAGSESCVAVKEEDYIKAGGSQLVFVQMQQNKSMDKQSKLADKLPPISIGNGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGRVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKLLEYEEWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHDHSRGR****QSNENISMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTFFRLPKWY
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MEYYCLGARNFAAMAVSPFPTGRTRRKALRVRTKQSAVDCNHSSYKVTARATSNNAGSESCVAVKEEDYIKAGGSQLVFVQMQQNKSMDKQSKLADKLPPISIGNGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGRVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKLLEYEEWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHDHSRGRLTHEQSNENISMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTFFRLPKWY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query375 2.2.26 [Sep-21-2011]
Q38932 524 Lycopene epsilon cyclase, yes no 0.874 0.625 0.543 1e-101
O65837 526 Lycopene epsilon cyclase, N/A no 0.653 0.465 0.658 3e-93
Q40424503 Lycopene beta cyclase, ch N/A no 0.32 0.238 0.437 2e-23
Q43415498 Lycopene beta cyclase, ch N/A no 0.32 0.240 0.429 5e-23
Q9M424 498 Neoxanthin synthase, chlo N/A no 0.464 0.349 0.369 7e-23
Q38933501 Lycopene beta cyclase, ch no no 0.325 0.243 0.425 1e-22
Q43503500 Lycopene beta cyclase, ch N/A no 0.32 0.24 0.429 2e-22
Q43578500 Lycopene beta cyclase, ch N/A no 0.32 0.24 0.437 1e-21
Q9SEA0 503 Capsanthin/capsorubin syn no no 0.384 0.286 0.377 8e-20
Q42435 498 Capsanthin/capsorubin syn N/A no 0.386 0.291 0.390 3e-19
>sp|Q38932|LCYE_ARATH Lycopene epsilon cyclase, chloroplastic OS=Arabidopsis thaliana GN=LUT2 PE=1 SV=2 Back     alignment and function desciption
 Score =  368 bits (944), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 205/377 (54%), Positives = 249/377 (66%), Gaps = 49/377 (12%)

Query: 5   CLGARNFAAMAVSPFPTGRTRRKALRVRTKQSAVDCNHSSYKVTARATSNNAGSESCVAV 64
           C+GARNFAAMAVS FP+   RRK   V  + S  +       V A    ++  SESCVAV
Sbjct: 3   CVGARNFAAMAVSTFPSWSCRRK-FPVVKRYSYRNIRFGLCSVRASGGGSSG-SESCVAV 60

Query: 65  KE-----EDYIKAGGSQLVFVQMQQNKSMDKQSKLADKLPPISIGNGILDLVVIGCGPAG 119
           +E     ED++KAGGS+++FVQMQQNK MD+QSKL DKLPPISIG+G LDLVVIGCGPAG
Sbjct: 61  REDFADEEDFVKAGGSEILFVQMQQNKDMDEQSKLVDKLPPISIGDGALDLVVIGCGPAG 120

Query: 120 LALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPI 179
           LALAAESAKLGL VGLIGPDLPFTNNYGVWEDEF DLGL+ CIEHVWR+T+VY+D+D+PI
Sbjct: 121 LALAAESAKLGLKVGLIGPDLPFTNNYGVWEDEFNDLGLQKCIEHVWRETIVYLDDDKPI 180

Query: 180 LIGRAYGRVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLA 239
            IGRAYGRVSR LLHEELLRRCVESGVSYLSSKV+SITE++ G RLVAC+ + ++PCRLA
Sbjct: 181 TIGRAYGRVSRRLLHEELLRRCVESGVSYLSSKVDSITEASDGLRLVACDDNNVIPCRLA 240

Query: 240 TVASGAASGKLLEYEEWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPN 299
           TVASGAASGKLL+YE      VGG                  V   T Y V   +  +P 
Sbjct: 241 TVASGAASGKLLQYE------VGG----------------PRVCVQTAYGVEVEVENSPY 278

Query: 300 YASAIAYILKHDHSRGRLTHEQSNENISMQAWNTLWPQERKRQRAFF------------- 346
               + ++   D++  ++       ++  +    L+     + R FF             
Sbjct: 279 DPDQMVFMDYRDYTNEKV------RSLEAEYPTFLYAMPMTKSRLFFEETCLASKDVMPF 332

Query: 347 -LFGLALILQLDIEGIR 362
            L    L+L+LD  GIR
Sbjct: 333 DLLKTKLMLRLDTLGIR 349
Catalyzes the single epsilon-cyclization reaction which converts lycopene to delta-carotene and neurosporene to alpha-zeacarotene. Required for lutein biosynthesis.
Arabidopsis thaliana (taxid: 3702)
EC: 5EC: .EC: 5EC: .EC: 1EC: .EC: 1EC: 8
>sp|O65837|LCYE_SOLLC Lycopene epsilon cyclase, chloroplastic OS=Solanum lycopersicum GN=CRTL-E-1 PE=2 SV=1 Back     alignment and function description
>sp|Q40424|LCYB_NARPS Lycopene beta cyclase, chloroplastic/chromoplastic OS=Narcissus pseudonarcissus GN=LCY1 PE=2 SV=1 Back     alignment and function description
>sp|Q43415|LCYB_CAPAN Lycopene beta cyclase, chloroplastic/chromoplastic OS=Capsicum annuum GN=LCY1 PE=2 SV=1 Back     alignment and function description
>sp|Q9M424|NXS_SOLTU Neoxanthin synthase, chloroplastic OS=Solanum tuberosum GN=NXS PE=1 SV=1 Back     alignment and function description
>sp|Q38933|LCYB_ARATH Lycopene beta cyclase, chloroplastic OS=Arabidopsis thaliana GN=LCY1 PE=2 SV=1 Back     alignment and function description
>sp|Q43503|LCYB_SOLLC Lycopene beta cyclase, chloroplastic OS=Solanum lycopersicum GN=LCY1 PE=1 SV=1 Back     alignment and function description
>sp|Q43578|LCYB_TOBAC Lycopene beta cyclase, chloroplastic OS=Nicotiana tabacum GN=LCY1 PE=1 SV=1 Back     alignment and function description
>sp|Q9SEA0|CCS_CITSI Capsanthin/capsorubin synthase, chromoplast OS=Citrus sinensis GN=CCS PE=3 SV=1 Back     alignment and function description
>sp|Q42435|CCS_CAPAN Capsanthin/capsorubin synthase, chromoplast OS=Capsicum annuum GN=CCS PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query375
92109236 529 lycopene epsilon-cyclase [Citrus unshiu] 0.677 0.480 0.992 1e-146
255546153 508 Lycopene epsilon cyclase, chloroplast pr 0.757 0.559 0.626 1e-103
301349920 532 lycopene epsilon cyclase [Camellia sinen 0.661 0.466 0.743 1e-102
357449933 531 Lycopene epsilon cyclase [Medicago trunc 0.661 0.467 0.722 1e-99
124361148 529 NAD-binding site [Medicago truncatula] 0.661 0.468 0.722 1e-99
297793217 529 hypothetical protein ARALYDRAFT_918865 [ 0.661 0.468 0.721 2e-99
15242019 524 lycopene epsilon cyclase [Arabidopsis th 0.874 0.625 0.543 3e-99
225444859 529 PREDICTED: lycopene epsilon cyclase, chl 0.829 0.587 0.585 2e-98
1399181 524 lycopene epsilon cyclase [Arabidopsis th 0.874 0.625 0.541 2e-98
399158072 530 lycopene epsilon-cyclase 1 [Vitis vinife 0.685 0.484 0.703 4e-97
>gi|92109236|dbj|BAE93359.1| lycopene epsilon-cyclase [Citrus unshiu] Back     alignment and taxonomy information
 Score =  523 bits (1346), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 252/254 (99%), Positives = 253/254 (99%)

Query: 1   MEYYCLGARNFAAMAVSPFPTGRTRRKALRVRTKQSAVDCNHSSYKVTARATSNNAGSES 60
           MEYYCLGARNFAAMAVSPFPTGR RRKALRV+TKQSAVDCNHSSYKVTARATSNNAGSES
Sbjct: 1   MEYYCLGARNFAAMAVSPFPTGRARRKALRVKTKQSAVDCNHSSYKVTARATSNNAGSES 60

Query: 61  CVAVKEEDYIKAGGSQLVFVQMQQNKSMDKQSKLADKLPPISIGNGILDLVVIGCGPAGL 120
           CVAVKEEDYIKAGGSQLVFVQMQQNKSMDKQSKLADKLPPISIGNGILDLVVIGCGPAGL
Sbjct: 61  CVAVKEEDYIKAGGSQLVFVQMQQNKSMDKQSKLADKLPPISIGNGILDLVVIGCGPAGL 120

Query: 121 ALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPIL 180
           ALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPIL
Sbjct: 121 ALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPIL 180

Query: 181 IGRAYGRVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLAT 240
           IGRAYGRVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLAT
Sbjct: 181 IGRAYGRVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLAT 240

Query: 241 VASGAASGKLLEYE 254
           VASGAASGKLLEYE
Sbjct: 241 VASGAASGKLLEYE 254

Source: Citrus unshiu

Species: Citrus unshiu

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255546153|ref|XP_002514136.1| Lycopene epsilon cyclase, chloroplast precursor, putative [Ricinus communis] gi|223546592|gb|EEF48090.1| Lycopene epsilon cyclase, chloroplast precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|301349920|gb|ADK74376.1| lycopene epsilon cyclase [Camellia sinensis var. assamica] Back     alignment and taxonomy information
>gi|357449933|ref|XP_003595243.1| Lycopene epsilon cyclase [Medicago truncatula] gi|355484291|gb|AES65494.1| Lycopene epsilon cyclase [Medicago truncatula] Back     alignment and taxonomy information
>gi|124361148|gb|ABN09120.1| NAD-binding site [Medicago truncatula] Back     alignment and taxonomy information
>gi|297793217|ref|XP_002864493.1| hypothetical protein ARALYDRAFT_918865 [Arabidopsis lyrata subsp. lyrata] gi|297310328|gb|EFH40752.1| hypothetical protein ARALYDRAFT_918865 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15242019|ref|NP_200513.1| lycopene epsilon cyclase [Arabidopsis thaliana] gi|27735211|sp|Q38932.2|LCYE_ARATH RecName: Full=Lycopene epsilon cyclase, chloroplastic; AltName: Full=Protein LUTEIN DEFICIENT 2; Flags: Precursor gi|9049486|gb|AAF82389.1|AF117257_1 lycopene epsilon cyclase [Arabidopsis thaliana] gi|8777443|dbj|BAA97033.1| lycopene epsilon cyclase [Arabidopsis thaliana] gi|14532800|gb|AAK64181.1| putative lycopene epsilon cyclase [Arabidopsis thaliana] gi|19310743|gb|AAL85102.1| putative lycopene epsilon cyclase [Arabidopsis thaliana] gi|332009453|gb|AED96836.1| lycopene epsilon cyclase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|225444859|ref|XP_002281164.1| PREDICTED: lycopene epsilon cyclase, chloroplastic [Vitis vinifera] Back     alignment and taxonomy information
>gi|1399181|gb|AAB53336.1| lycopene epsilon cyclase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|399158072|gb|AFP28798.1| lycopene epsilon-cyclase 1 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query375
TAIR|locus:2164590 524 LUT2 "LUTEIN DEFICIENT 2" [Ara 0.661 0.473 0.686 2.2e-137
TAIR|locus:2076319501 LYC "lycopene cyclase" [Arabid 0.325 0.243 0.440 3.4e-41
UNIPROTKB|Q9M424 498 NXS "Neoxanthin synthase, chlo 0.464 0.349 0.358 2.7e-38
TAIR|locus:2164590 LUT2 "LUTEIN DEFICIENT 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 873 (312.4 bits), Expect = 2.2e-137, Sum P(2) = 2.2e-137
 Identities = 175/255 (68%), Positives = 204/255 (80%)

Query:     5 CLGARNFAAMAVSPFPTGRTRRKALRVRTKQSAVDCNHSSYKVTARATSNNAGSESCVAV 64
             C+GARNFAAMAVS FP+   RRK   V+ + S  +       V A     ++GSESCVAV
Sbjct:     3 CVGARNFAAMAVSTFPSWSCRRKFPVVK-RYSYRNIRFGLCSVRASG-GGSSGSESCVAV 60

Query:    65 KE-----EDYIKAGGSQLVFVQMQQNKSMDKQSKLADKLPPISIGNGILDLVVIGCGPAG 119
             +E     ED++KAGGS+++FVQMQQNK MD+QSKL DKLPPISIG+G LDLVVIGCGPAG
Sbjct:    61 REDFADEEDFVKAGGSEILFVQMQQNKDMDEQSKLVDKLPPISIGDGALDLVVIGCGPAG 120

Query:   120 LALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPI 179
             LALAAESAKLGL VGLIGPDLPFTNNYGVWEDEF DLGL+ CIEHVWR+T+VY+D+D+PI
Sbjct:   121 LALAAESAKLGLKVGLIGPDLPFTNNYGVWEDEFNDLGLQKCIEHVWRETIVYLDDDKPI 180

Query:   180 LIGRAYGRVSXXXXXXXXXXXCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLA 239
              IGRAYGRVS           CVESGVSYLSSKV+SITE++ G RLVAC+ + ++PCRLA
Sbjct:   181 TIGRAYGRVSRRLLHEELLRRCVESGVSYLSSKVDSITEASDGLRLVACDDNNVIPCRLA 240

Query:   240 TVASGAASGKLLEYE 254
             TVASGAASGKLL+YE
Sbjct:   241 TVASGAASGKLLQYE 255
GO:0009507 "chloroplast" evidence=ISM;TAS
GO:0009765 "photosynthesis, light harvesting" evidence=TAS
GO:0016117 "carotenoid biosynthetic process" evidence=IEA;IMP;RCA
GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA
GO:0016123 "xanthophyll biosynthetic process" evidence=IGI
GO:0010103 "stomatal complex morphogenesis" evidence=RCA
GO:0016120 "carotene biosynthetic process" evidence=IGI
GO:0045435 "lycopene epsilon cyclase activity" evidence=IGI;TAS
TAIR|locus:2076319 LYC "lycopene cyclase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q9M424 NXS "Neoxanthin synthase, chloroplastic" [Solanum tuberosum (taxid:4113)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q38932LCYE_ARATH5, ., 5, ., 1, ., 1, 80.54370.87460.6259yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
scaffold_802265.1
annotation not avaliable (529 aa)
(Arabidopsis lyrata)
Predicted Functional Partners:
fgenesh2_kg.3__459__AT3G04870.2
annotation not avaliable (561 aa)
   • •• 0.740
fgenesh2_kg.1__658__AT1G06820.1
annotation not avaliable (590 aa)
   • •• 0.695
scaffold_601772.1
annotation not avaliable (421 aa)
   •  • 0.672
fgenesh2_kg.4__1248__AT2G32640.2
annotation not avaliable (383 aa)
   • •• 0.532
fgenesh2_kg.7__2923__AT4G14210.1
At4g14210-like protein (569 aa)
     •• 0.470
fgenesh2_kg.1__870__AT1G08550.1
annotation not avaliable (455 aa)
   •  • 0.451
fgenesh2_kg.8__2713__AT5G67030.1
annotation not avaliable (667 aa)
   •  • 0.425
scaffold_104192.1
annotation not avaliable (265 aa)
   •  • 0.418

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query375
PLN02697 529 PLN02697, PLN02697, lycopene epsilon cyclase 1e-148
PLN02697529 PLN02697, PLN02697, lycopene epsilon cyclase 1e-79
pfam05834 374 pfam05834, Lycopene_cycl, Lycopene cyclase protein 1e-53
TIGR01790 388 TIGR01790, carotene-cycl, lycopene cyclase family 2e-50
pfam05834374 pfam05834, Lycopene_cycl, Lycopene cyclase protein 2e-44
TIGR01790388 TIGR01790, carotene-cycl, lycopene cyclase family 1e-42
PLN02463 447 PLN02463, PLN02463, lycopene beta cyclase 2e-35
PLN02463447 PLN02463, PLN02463, lycopene beta cyclase 2e-32
COG0644 396 COG0644, FixC, Dehydrogenases (flavoproteins) [Ene 8e-08
COG1249 454 COG1249, Lpd, Pyruvate/2-oxoglutarate dehydrogenas 3e-05
COG0654387 COG0654, UbiH, 2-polyprenyl-6-methoxyphenol hydrox 6e-05
PRK06370 463 PRK06370, PRK06370, mercuric reductase; Validated 3e-04
pfam07992283 pfam07992, Pyr_redox_2, Pyridine nucleotide-disulp 4e-04
PRK09126 392 PRK09126, PRK09126, hypothetical protein; Provisio 4e-04
PRK05249 461 PRK05249, PRK05249, soluble pyridine nucleotide tr 0.001
PRK06292 460 PRK06292, PRK06292, dihydrolipoamide dehydrogenase 0.002
TIGR01350 460 TIGR01350, lipoamide_DH, dihydrolipoamide dehydrog 0.003
>gnl|CDD|215375 PLN02697, PLN02697, lycopene epsilon cyclase Back     alignment and domain information 
 Score =  428 bits (1102), Expect = e-148
 Identities = 191/265 (72%), Positives = 213/265 (80%), Gaps = 15/265 (5%)

Query: 5   CLGARNFAAMAVSPFPTGRTRRKALRVRTKQSAVDCNHSSYKVTARAT-SNNAGSESCVA 63
           CLGARNFAAMAVS  P   +RR+    R        +      T  AT    +GSESCV 
Sbjct: 3   CLGARNFAAMAVSTSPGWSSRRRRPVRRGNDVR---SSRGLSCTVVATRGGKSGSESCVV 59

Query: 64  VK-----EEDYIKAGGSQLVFVQMQQNKSMDKQSKLADKLPPISIGNGILDLVVIGCGPA 118
           V      EEDYIKAGGS+L+FVQMQ NKSMD+QSK+ADKLPPISIG+G LDLVVIGCGPA
Sbjct: 60  VDEEFADEEDYIKAGGSELLFVQMQANKSMDEQSKIADKLPPISIGDGTLDLVVIGCGPA 119

Query: 119 GLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEP 178
           GLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEF+DLGLE CIEHVWRDT+VY+D+D+P
Sbjct: 120 GLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFKDLGLEDCIEHVWRDTIVYLDDDKP 179

Query: 179 ILIGRAYGRVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRL 238
           I+IGRAYGRVSR LLHEELLRRCVESGVSYLSSKV+ ITE++ G RLVACE   ++PCRL
Sbjct: 180 IMIGRAYGRVSRTLLHEELLRRCVESGVSYLSSKVDRITEASDGLRLVACEDGRVIPCRL 239

Query: 239 ATVASGAASGKLLEYEEWSYIPVGG 263
           ATVASGAASG+LL+YE      VGG
Sbjct: 240 ATVASGAASGRLLQYE------VGG 258

Length = 529
>gnl|CDD|215375 PLN02697, PLN02697, lycopene epsilon cyclase Back     alignment and domain information
>gnl|CDD|218770 pfam05834, Lycopene_cycl, Lycopene cyclase protein Back     alignment and domain information
>gnl|CDD|130850 TIGR01790, carotene-cycl, lycopene cyclase family protein Back     alignment and domain information
>gnl|CDD|218770 pfam05834, Lycopene_cycl, Lycopene cyclase protein Back     alignment and domain information
>gnl|CDD|130850 TIGR01790, carotene-cycl, lycopene cyclase family protein Back     alignment and domain information
>gnl|CDD|178082 PLN02463, PLN02463, lycopene beta cyclase Back     alignment and domain information
>gnl|CDD|178082 PLN02463, PLN02463, lycopene beta cyclase Back     alignment and domain information
>gnl|CDD|223717 COG0644, FixC, Dehydrogenases (flavoproteins) [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|224169 COG1249, Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|223727 COG0654, UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] Back     alignment and domain information
>gnl|CDD|235787 PRK06370, PRK06370, mercuric reductase; Validated Back     alignment and domain information
>gnl|CDD|219686 pfam07992, Pyr_redox_2, Pyridine nucleotide-disulphide oxidoreductase Back     alignment and domain information
>gnl|CDD|236385 PRK09126, PRK09126, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|235373 PRK05249, PRK05249, soluble pyridine nucleotide transhydrogenase; Provisional Back     alignment and domain information
>gnl|CDD|235774 PRK06292, PRK06292, dihydrolipoamide dehydrogenase; Validated Back     alignment and domain information
>gnl|CDD|233368 TIGR01350, lipoamide_DH, dihydrolipoamide dehydrogenase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 375
PLN02697529 lycopene epsilon cyclase 100.0
PLN02463447 lycopene beta cyclase 100.0
TIGR01790388 carotene-cycl lycopene cyclase family protein. Thi 99.97
PF05834374 Lycopene_cycl: Lycopene cyclase protein; InterPro: 99.96
TIGR02023388 BchP-ChlP geranylgeranyl reductase. This model rep 99.95
PLN00093450 geranylgeranyl diphosphate reductase; Provisional 99.95
TIGR02028398 ChlP geranylgeranyl reductase. This model represen 99.95
COG0644396 FixC Dehydrogenases (flavoproteins) [Energy produc 99.94
PRK08020391 ubiF 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquin 99.93
PRK08013400 oxidoreductase; Provisional 99.93
PRK05714405 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hy 99.93
COG0654387 UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and 99.93
PRK08773392 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hy 99.92
PRK10015429 oxidoreductase; Provisional 99.92
PRK07494388 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisio 99.92
PRK08849384 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hy 99.92
TIGR01789370 lycopene_cycl lycopene cyclase. This model represe 99.92
PRK06185407 hypothetical protein; Provisional 99.92
PRK07333403 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisio 99.91
PRK06617374 2-octaprenyl-6-methoxyphenyl hydroxylase; Validate 99.91
PRK08850405 2-octaprenyl-6-methoxyphenol hydroxylase; Validate 99.91
TIGR01989437 COQ6 Ubiquinone biosynthesis mono0xygenase COQ6. T 99.91
PRK10157428 putative oxidoreductase FixC; Provisional 99.91
PF01494356 FAD_binding_3: FAD binding domain; InterPro: IPR00 99.91
PRK06834 488 hypothetical protein; Provisional 99.9
PRK07364415 2-octaprenyl-6-methoxyphenyl hydroxylase; Validate 99.9
TIGR01988385 Ubi-OHases Ubiquinone biosynthesis hydroxylase, Ub 99.9
PRK09126392 hypothetical protein; Provisional 99.9
PRK06996398 hypothetical protein; Provisional 99.9
PRK07045388 putative monooxygenase; Reviewed 99.9
PRK06183 538 mhpA 3-(3-hydroxyphenyl)propionate hydroxylase; Va 99.9
PRK07190 487 hypothetical protein; Provisional 99.9
PRK07608388 ubiquinone biosynthesis hydroxylase family protein 99.89
TIGR01984382 UbiH 2-polyprenyl-6-methoxyphenol 4-hydroxylase. T 99.89
PRK08244 493 hypothetical protein; Provisional 99.89
PRK11445351 putative oxidoreductase; Provisional 99.89
PRK08243392 4-hydroxybenzoate 3-monooxygenase; Validated 99.89
TIGR02032295 GG-red-SF geranylgeranyl reductase family. This mo 99.89
PRK07588391 hypothetical protein; Provisional 99.89
PRK05732395 2-octaprenyl-6-methoxyphenyl hydroxylase; Validate 99.89
PRK06184 502 hypothetical protein; Provisional 99.88
PRK07538 413 hypothetical protein; Provisional 99.87
TIGR02360390 pbenz_hydroxyl 4-hydroxybenzoate 3-monooxygenase. 99.87
PRK08132 547 FAD-dependent oxidoreductase; Provisional 99.86
PRK06753373 hypothetical protein; Provisional 99.86
PRK08294 634 phenol 2-monooxygenase; Provisional 99.86
PRK08163396 salicylate hydroxylase; Provisional 99.86
PRK06126 545 hypothetical protein; Provisional 99.86
PRK06847375 hypothetical protein; Provisional 99.85
PLN02985514 squalene monooxygenase 99.85
PTZ00367 567 squalene epoxidase; Provisional 99.85
PRK06475 400 salicylate hydroxylase; Provisional 99.85
PRK05868372 hypothetical protein; Validated 99.84
PRK07236 386 hypothetical protein; Provisional 99.8
TIGR03219 414 salicylate_mono salicylate 1-monooxygenase. Member 99.79
PLN02927 668 antheraxanthin epoxidase/zeaxanthin epoxidase 99.78
KOG2614420 consensus Kynurenine 3-monooxygenase and related f 99.75
PF04820454 Trp_halogenase: Tryptophan halogenase; InterPro: I 99.73
PRK08255 765 salicylyl-CoA 5-hydroxylase; Reviewed 99.7
PRK04176257 ribulose-1,5-biphosphate synthetase; Provisional 99.7
KOG1298509 consensus Squalene monooxygenase [Lipid transport 99.7
COG1635262 THI4 Ribulose 1,5-bisphosphate synthetase, convert 99.69
KOG3855481 consensus Monooxygenase involved in coenzyme Q (ub 99.68
TIGR00292254 thiazole biosynthesis enzyme. This enzyme is invol 99.68
COG2081 408 Predicted flavoproteins [General function predicti 99.63
PF13738203 Pyr_redox_3: Pyridine nucleotide-disulphide oxidor 99.61
KOG2415 621 consensus Electron transfer flavoprotein ubiquinon 99.61
PF03486 409 HI0933_like: HI0933-like protein; InterPro: IPR004 99.59
PF01946230 Thi4: Thi4 family; PDB: 1RP0_A 3FPZ_B 3JSK_K. 99.57
COG0492305 TrxB Thioredoxin reductase [Posttranslational modi 99.56
PLN02172 461 flavin-containing monooxygenase FMO GS-OX 99.53
PRK05192 618 tRNA uridine 5-carboxymethylaminomethyl modificati 99.52
TIGR01292300 TRX_reduct thioredoxin-disulfide reductase. This m 99.51
COG2072 443 TrkA Predicted flavoprotein involved in K+ transpo 99.5
PRK15317517 alkyl hydroperoxide reductase subunit F; Provision 99.47
PRK12779 944 putative bifunctional glutamate synthase subunit b 99.47
PF01266358 DAO: FAD dependent oxidoreductase; InterPro: IPR00 99.46
TIGR03143 555 AhpF_homolog putative alkyl hydroperoxide reductas 99.46
PF01134 392 GIDA: Glucose inhibited division protein A; InterP 99.45
PRK12831464 putative oxidoreductase; Provisional 99.45
PF00743 531 FMO-like: Flavin-binding monooxygenase-like; Inter 99.45
PLN02661357 Putative thiazole synthesis 99.44
TIGR03140515 AhpF alkyl hydroperoxide reductase, F subunit. Thi 99.42
TIGR00136 617 gidA glucose-inhibited division protein A. GidA, t 99.39
PRK10262321 thioredoxin reductase; Provisional 99.38
TIGR03329460 Phn_aa_oxid putative aminophosphonate oxidoreducta 99.38
PRK11259376 solA N-methyltryptophan oxidase; Provisional 99.38
KOG1399 448 consensus Flavin-containing monooxygenase [Seconda 99.38
PRK05249 461 soluble pyridine nucleotide transhydrogenase; Prov 99.38
PRK06116 450 glutathione reductase; Validated 99.36
PRK11728393 hydroxyglutarate oxidase; Provisional 99.36
TIGR01424 446 gluta_reduc_2 glutathione-disulfide reductase, pla 99.36
PRK12775 1006 putative trifunctional 2-polyprenylphenol hydroxyl 99.35
TIGR01377380 soxA_mon sarcosine oxidase, monomeric form. Sarcos 99.35
COG0579429 Predicted dehydrogenase [General function predicti 99.35
PRK06416 462 dihydrolipoamide dehydrogenase; Reviewed 99.34
PRK05976 472 dihydrolipoamide dehydrogenase; Validated 99.34
PRK06467 471 dihydrolipoamide dehydrogenase; Reviewed 99.34
PRK09754396 phenylpropionate dioxygenase ferredoxin reductase 99.33
PRK09853 1019 putative selenate reductase subunit YgfK; Provisio 99.33
PRK06116450 glutathione reductase; Validated 99.32
PRK12810471 gltD glutamate synthase subunit beta; Reviewed 99.32
TIGR01421 450 gluta_reduc_1 glutathione-disulfide reductase, ani 99.32
PTZ00383497 malate:quinone oxidoreductase; Provisional 99.32
PRK14694 468 putative mercuric reductase; Provisional 99.31
PRK06481 506 fumarate reductase flavoprotein subunit; Validated 99.31
PRK05249461 soluble pyridine nucleotide transhydrogenase; Prov 99.31
PRK11101 546 glpA sn-glycerol-3-phosphate dehydrogenase subunit 99.3
TIGR03315 1012 Se_ygfK putative selenate reductase, YgfK subunit. 99.3
PTZ00058 561 glutathione reductase; Provisional 99.29
PLN02507 499 glutathione reductase 99.29
TIGR01316449 gltA glutamate synthase (NADPH), homotetrameric. T 99.29
TIGR01373407 soxB sarcosine oxidase, beta subunit family, heter 99.29
PRK12778752 putative bifunctional 2-polyprenylphenol hydroxyla 99.29
TIGR01350461 lipoamide_DH dihydrolipoamide dehydrogenase. The m 99.29
PRK12769654 putative oxidoreductase Fe-S binding subunit; Revi 99.29
TIGR01421450 gluta_reduc_1 glutathione-disulfide reductase, ani 99.29
PRK00711416 D-amino acid dehydrogenase small subunit; Validate 99.28
PRK06115 466 dihydrolipoamide dehydrogenase; Reviewed 99.28
PRK01747662 mnmC bifunctional tRNA (mnm(5)s(2)U34)-methyltrans 99.28
PRK13369 502 glycerol-3-phosphate dehydrogenase; Provisional 99.28
PLN02546 558 glutathione reductase 99.27
COG1249 454 Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, 99.27
PTZ00318424 NADH dehydrogenase-like protein; Provisional 99.27
PRK06416462 dihydrolipoamide dehydrogenase; Reviewed 99.27
COG1249454 Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, 99.27
COG1252405 Ndh NADH dehydrogenase, FAD-containing subunit [En 99.26
PRK06370 463 mercuric reductase; Validated 99.26
PRK06327 475 dihydrolipoamide dehydrogenase; Validated 99.26
PLN02507499 glutathione reductase 99.26
PF00890417 FAD_binding_2: FAD binding domain of the Pfam fami 99.26
PRK04965377 NADH:flavorubredoxin oxidoreductase; Provisional 99.26
PRK08010 441 pyridine nucleotide-disulfide oxidoreductase; Prov 99.26
PRK13748 561 putative mercuric reductase; Provisional 99.25
TIGR01424446 gluta_reduc_2 glutathione-disulfide reductase, pla 99.25
TIGR01423486 trypano_reduc trypanothione-disulfide reductase. T 99.24
PF12831 428 FAD_oxidored: FAD dependent oxidoreductase; PDB: 3 99.24
TIGR01318467 gltD_gamma_fam glutamate synthase small subunit fa 99.24
PRK07251 438 pyridine nucleotide-disulfide oxidoreductase; Prov 99.24
COG3634520 AhpF Alkyl hydroperoxide reductase, large subunit 99.24
PRK07818466 dihydrolipoamide dehydrogenase; Reviewed 99.24
PRK12409410 D-amino acid dehydrogenase small subunit; Provisio 99.23
PRK07818 466 dihydrolipoamide dehydrogenase; Reviewed 99.23
TIGR03364365 HpnW_proposed FAD dependent oxidoreductase TIGR033 99.23
PRK06567 1028 putative bifunctional glutamate synthase subunit b 99.23
PRK07845466 flavoprotein disulfide reductase; Reviewed 99.23
TIGR03385427 CoA_CoA_reduc CoA-disulfide reductase. Members of 99.22
PRK12266 508 glpD glycerol-3-phosphate dehydrogenase; Reviewed 99.22
TIGR02053463 MerA mercuric reductase. This model represents the 99.22
COG0493457 GltD NADPH-dependent glutamate synthase beta chain 99.21
PRK06370463 mercuric reductase; Validated 99.21
PRK06327475 dihydrolipoamide dehydrogenase; Validated 99.2
PRK07846451 mycothione reductase; Reviewed 99.2
PRK07804 541 L-aspartate oxidase; Provisional 99.2
KOG2820399 consensus FAD-dependent oxidoreductase [General fu 99.2
PRK11749457 dihydropyrimidine dehydrogenase subunit A; Provisi 99.2
PRK08010441 pyridine nucleotide-disulfide oxidoreductase; Prov 99.19
PRK06912 458 acoL dihydrolipoamide dehydrogenase; Validated 99.19
PTZ00153 659 lipoamide dehydrogenase; Provisional 99.18
PRK07251438 pyridine nucleotide-disulfide oxidoreductase; Prov 99.18
TIGR00275 400 flavoprotein, HI0933 family. The model when search 99.18
TIGR02053 463 MerA mercuric reductase. This model represents the 99.18
PRK06452 566 sdhA succinate dehydrogenase flavoprotein subunit; 99.18
PRK08274 466 tricarballylate dehydrogenase; Validated 99.18
PRK05976472 dihydrolipoamide dehydrogenase; Validated 99.18
PRK06912458 acoL dihydrolipoamide dehydrogenase; Validated 99.17
PLN00128 635 Succinate dehydrogenase [ubiquinone] flavoprotein 99.17
PRK08401 466 L-aspartate oxidase; Provisional 99.17
TIGR01350 461 lipoamide_DH dihydrolipoamide dehydrogenase. The m 99.17
TIGR01423 486 trypano_reduc trypanothione-disulfide reductase. T 99.16
PRK14727 479 putative mercuric reductase; Provisional 99.16
PRK09078 598 sdhA succinate dehydrogenase flavoprotein subunit; 99.16
PRK09564444 coenzyme A disulfide reductase; Reviewed 99.16
PRK12814652 putative NADPH-dependent glutamate synthase small 99.16
TIGR01813 439 flavo_cyto_c flavocytochrome c. This model describ 99.15
PRK07845 466 flavoprotein disulfide reductase; Reviewed 99.15
TIGR03452452 mycothione_red mycothione reductase. Mycothiol, a 99.15
PRK09231 582 fumarate reductase flavoprotein subunit; Validated 99.15
PTZ00139 617 Succinate dehydrogenase [ubiquinone] flavoprotein 99.15
PRK14727479 putative mercuric reductase; Provisional 99.15
PRK06292 460 dihydrolipoamide dehydrogenase; Validated 99.14
PLN02464 627 glycerol-3-phosphate dehydrogenase 99.14
TIGR01812 566 sdhA_frdA_Gneg succinate dehydrogenase or fumarate 99.14
PLN02546558 glutathione reductase 99.14
PRK06175 433 L-aspartate oxidase; Provisional 99.14
COG0665387 DadA Glycine/D-amino acid oxidases (deaminating) [ 99.14
TIGR00551 488 nadB L-aspartate oxidase. L-aspartate oxidase is t 99.13
PRK14989 847 nitrite reductase subunit NirD; Provisional 99.13
PRK13512438 coenzyme A disulfide reductase; Provisional 99.12
PRK14694468 putative mercuric reductase; Provisional 99.12
PRK07121 492 hypothetical protein; Validated 99.12
PRK07057 591 sdhA succinate dehydrogenase flavoprotein subunit; 99.12
TIGR01438 484 TGR thioredoxin and glutathione reductase selenopr 99.11
PRK06467471 dihydrolipoamide dehydrogenase; Reviewed 99.11
PRK06115466 dihydrolipoamide dehydrogenase; Reviewed 99.11
PTZ00058561 glutathione reductase; Provisional 99.11
TIGR02374 785 nitri_red_nirB nitrite reductase [NAD(P)H], large 99.11
PRK06069 577 sdhA succinate dehydrogenase flavoprotein subunit; 99.1
PRK13748561 putative mercuric reductase; Provisional 99.1
PRK07846 451 mycothione reductase; Reviewed 99.1
PRK07573 640 sdhA succinate dehydrogenase flavoprotein subunit; 99.1
PF0007080 Pyr_redox: Pyridine nucleotide-disulphide oxidored 99.1
PRK08205 583 sdhA succinate dehydrogenase flavoprotein subunit; 99.1
PTZ00052 499 thioredoxin reductase; Provisional 99.1
TIGR01320 483 mal_quin_oxido malate:quinone-oxidoreductase. This 99.1
PRK08958 588 sdhA succinate dehydrogenase flavoprotein subunit; 99.1
PRK06292460 dihydrolipoamide dehydrogenase; Validated 99.09
PF13454156 NAD_binding_9: FAD-NAD(P)-binding 99.09
PRK05257 494 malate:quinone oxidoreductase; Validated 99.09
TIGR03169364 Nterm_to_SelD pyridine nucleotide-disulfide oxidor 99.09
PRK05945 575 sdhA succinate dehydrogenase flavoprotein subunit; 99.08
PRK08071 510 L-aspartate oxidase; Provisional 99.08
PRK06263 543 sdhA succinate dehydrogenase flavoprotein subunit; 99.08
PRK12809 639 putative oxidoreductase Fe-S binding subunit; Revi 99.08
PRK08641 589 sdhA succinate dehydrogenase flavoprotein subunit; 99.07
PRK06854 608 adenylylsulfate reductase subunit alpha; Validated 99.07
PTZ00052499 thioredoxin reductase; Provisional 99.07
PRK13339 497 malate:quinone oxidoreductase; Reviewed 99.06
PRK09754 396 phenylpropionate dioxygenase ferredoxin reductase 99.06
PRK09897 534 hypothetical protein; Provisional 99.06
PRK07803 626 sdhA succinate dehydrogenase flavoprotein subunit; 99.06
TIGR01438484 TGR thioredoxin and glutathione reductase selenopr 99.05
PLN02815 594 L-aspartate oxidase 99.05
PRK05329422 anaerobic glycerol-3-phosphate dehydrogenase subun 99.04
PRK08275 554 putative oxidoreductase; Provisional 99.04
TIGR01176 580 fum_red_Fp fumarate reductase, flavoprotein subuni 99.04
PRK12771564 putative glutamate synthase (NADPH) small subunit; 99.04
PF07992201 Pyr_redox_2: Pyridine nucleotide-disulphide oxidor 99.03
PRK07395 553 L-aspartate oxidase; Provisional 99.03
PRK08626 657 fumarate reductase flavoprotein subunit; Provision 99.03
TIGR01292300 TRX_reduct thioredoxin-disulfide reductase. This m 99.01
TIGR01372 985 soxA sarcosine oxidase, alpha subunit family, hete 99.01
COG0445 621 GidA Flavin-dependent tRNA uridine 5-carboxymethyl 99.01
PRK09564 444 coenzyme A disulfide reductase; Reviewed 99.0
TIGR03378419 glycerol3P_GlpB glycerol-3-phosphate dehydrogenase 98.99
COG0578 532 GlpA Glycerol-3-phosphate dehydrogenase [Energy pr 98.99
TIGR01317 485 GOGAT_sm_gam glutamate synthases, NADH/NADPH, smal 98.99
PRK12844 557 3-ketosteroid-delta-1-dehydrogenase; Reviewed 98.99
PLN02852 491 ferredoxin-NADP+ reductase 98.99
PRK07512 513 L-aspartate oxidase; Provisional 98.98
TIGR03452 452 mycothione_red mycothione reductase. Mycothiol, a 98.98
KOG1335 506 consensus Dihydrolipoamide dehydrogenase [Energy p 98.97
PRK13984604 putative oxidoreductase; Provisional 98.97
PRK09077 536 L-aspartate oxidase; Provisional 98.96
PRK12845 564 3-ketosteroid-delta-1-dehydrogenase; Reviewed 98.96
TIGR01811 603 sdhA_Bsu succinate dehydrogenase or fumarate reduc 98.96
PRK12842 574 putative succinate dehydrogenase; Reviewed 98.96
PRK07843 557 3-ketosteroid-delta-1-dehydrogenase; Reviewed 98.96
PRK06134 581 putative FAD-binding dehydrogenase; Reviewed 98.95
TIGR01316449 gltA glutamate synthase (NADPH), homotetrameric. T 98.95
COG1148622 HdrA Heterodisulfide reductase, subunit A and rela 98.95
KOG0404322 consensus Thioredoxin reductase [Posttranslational 98.94
PRK13512 438 coenzyme A disulfide reductase; Provisional 98.94
PRK04965 377 NADH:flavorubredoxin oxidoreductase; Provisional 98.94
PRK10262321 thioredoxin reductase; Provisional 98.94
PRK12770352 putative glutamate synthase subunit beta; Provisio 98.94
TIGR03169 364 Nterm_to_SelD pyridine nucleotide-disulfide oxidor 98.93
PRK12834 549 putative FAD-binding dehydrogenase; Reviewed 98.93
PTZ00153659 lipoamide dehydrogenase; Provisional 98.92
PRK11749457 dihydropyrimidine dehydrogenase subunit A; Provisi 98.92
KOG0399 2142 consensus Glutamate synthase [Amino acid transport 98.92
PRK12835 584 3-ketosteroid-delta-1-dehydrogenase; Reviewed 98.92
TIGR03140515 AhpF alkyl hydroperoxide reductase, F subunit. Thi 98.91
PTZ00318 424 NADH dehydrogenase-like protein; Provisional 98.91
PRK12839 572 hypothetical protein; Provisional 98.91
COG3380331 Predicted NAD/FAD-dependent oxidoreductase [Genera 98.9
TIGR02374 785 nitri_red_nirB nitrite reductase [NAD(P)H], large 98.89
KOG2853509 consensus Possible oxidoreductase [General functio 98.87
PRK12837 513 3-ketosteroid-delta-1-dehydrogenase; Provisional 98.87
PRK14989 847 nitrite reductase subunit NirD; Provisional 98.87
PRK12831464 putative oxidoreductase; Provisional 98.85
COG1233487 Phytoene dehydrogenase and related proteins [Secon 98.85
PTZ00306 1167 NADH-dependent fumarate reductase; Provisional 98.84
PRK12843 578 putative FAD-binding dehydrogenase; Reviewed 98.84
TIGR02061 614 aprA adenosine phosphosulphate reductase, alpha su 98.84
COG0446415 HcaD Uncharacterized NAD(FAD)-dependent dehydrogen 98.83
PF06039 488 Mqo: Malate:quinone oxidoreductase (Mqo); InterPro 98.83
TIGR02730493 carot_isom carotene isomerase. Members of this fam 98.82
PF13434341 K_oxygenase: L-lysine 6-monooxygenase (NADPH-requi 98.82
PRK12770352 putative glutamate synthase subunit beta; Provisio 98.81
PRK05335 436 tRNA (uracil-5-)-methyltransferase Gid; Reviewed 98.8
TIGR02485 432 CobZ_N-term precorrin 3B synthase CobZ. CobZ is es 98.79
COG0029 518 NadB Aspartate oxidase [Coenzyme metabolism] 98.79
KOG0405 478 consensus Pyridine nucleotide-disulphide oxidoredu 98.79
PRK13800 897 putative oxidoreductase/HEAT repeat-containing pro 98.78
TIGR00137 433 gid_trmFO tRNA:m(5)U-54 methyltransferase. This mo 98.78
PRK15317517 alkyl hydroperoxide reductase subunit F; Provision 98.77
KOG2311 679 consensus NAD/FAD-utilizing protein possibly invol 98.76
KOG4716 503 consensus Thioredoxin reductase [Posttranslational 98.76
PRK12778752 putative bifunctional 2-polyprenylphenol hydroxyla 98.73
PRK07233434 hypothetical protein; Provisional 98.73
KOG2844 856 consensus Dimethylglycine dehydrogenase precursor 98.72
PTZ00188 506 adrenodoxin reductase; Provisional 98.71
COG4529 474 Uncharacterized protein conserved in bacteria [Fun 98.7
COG1252 405 Ndh NADH dehydrogenase, FAD-containing subunit [En 98.7
COG1053 562 SdhA Succinate dehydrogenase/fumarate reductase, f 98.69
KOG1336478 consensus Monodehydroascorbate/ferredoxin reductas 98.68
TIGR02734502 crtI_fam phytoene desaturase. Phytoene is converte 98.67
TIGR03143 555 AhpF_homolog putative alkyl hydroperoxide reductas 98.65
KOG2404 477 consensus Fumarate reductase, flavoprotein subunit 98.63
KOG1335506 consensus Dihydrolipoamide dehydrogenase [Energy p 98.61
PLN02612567 phytoene desaturase 98.6
PRK13977 576 myosin-cross-reactive antigen; Provisional 98.59
KOG2495491 consensus NADH-dehydrogenase (ubiquinone) [Energy 98.59
PRK11883 451 protoporphyrinogen oxidase; Reviewed 98.56
KOG2852380 consensus Possible oxidoreductase [General functio 98.56
COG2509 486 Uncharacterized FAD-dependent dehydrogenases [Gene 98.54
PRK12779 944 putative bifunctional glutamate synthase subunit b 98.51
PTZ00363443 rab-GDP dissociation inhibitor; Provisional 98.51
KOG1800 468 consensus Ferredoxin/adrenodoxin reductase [Nucleo 98.49
PRK13984604 putative oxidoreductase; Provisional 98.49
TIGR02731453 phytoene_desat phytoene desaturase. Plants and cya 98.49
PRK09853 1019 putative selenate reductase subunit YgfK; Provisio 98.48
PF1345068 NAD_binding_8: NAD(P)-binding Rossmann-like domain 98.47
PRK12775 1006 putative trifunctional 2-polyprenylphenol hydroxyl 98.43
COG1232 444 HemY Protoporphyrinogen oxidase [Coenzyme metaboli 98.43
COG3075421 GlpB Anaerobic glycerol-3-phosphate dehydrogenase 98.41
PRK12416463 protoporphyrinogen oxidase; Provisional 98.4
TIGR01372 985 soxA sarcosine oxidase, alpha subunit family, hete 98.38
COG3573 552 Predicted oxidoreductase [General function predict 98.38
PRK12809639 putative oxidoreductase Fe-S binding subunit; Revi 98.35
TIGR01317485 GOGAT_sm_gam glutamate synthases, NADH/NADPH, smal 98.34
COG1231 450 Monoamine oxidase [Amino acid transport and metabo 98.31
KOG2665453 consensus Predicted FAD-dependent oxidoreductase [ 98.31
TIGR03197381 MnmC_Cterm tRNA U-34 5-methylaminomethyl-2-thiouri 98.28
TIGR03315 1012 Se_ygfK putative selenate reductase, YgfK subunit. 98.24
KOG1346659 consensus Programmed cell death 8 (apoptosis-induc 98.16
KOG0042 680 consensus Glycerol-3-phosphate dehydrogenase [Ener 98.14
KOG0405478 consensus Pyridine nucleotide-disulphide oxidoredu 98.11
KOG0029 501 consensus Amine oxidase [Secondary metabolites bio 98.1
PRK07208 479 hypothetical protein; Provisional 98.05
PF08491276 SE: Squalene epoxidase; InterPro: IPR013698 This d 98.04
COG0492305 TrxB Thioredoxin reductase [Posttranslational modi 98.02
PLN02576 496 protoporphyrinogen oxidase 98.02
TIGR00031 377 UDP-GALP_mutase UDP-galactopyranose mutase. The ge 98.01
COG2907 447 Predicted NAD/FAD-binding protein [General functio 97.99
TIGR02733492 desat_CrtD C-3',4' desaturase CrtD. Members of thi 97.99
COG3349 485 Uncharacterized conserved protein [Function unknow 97.94
PLN02268 435 probable polyamine oxidase 97.93
KOG1336 478 consensus Monodehydroascorbate/ferredoxin reductas 97.93
TIGR00562 462 proto_IX_ox protoporphyrinogen oxidase. This prote 97.92
PF00732296 GMC_oxred_N: GMC oxidoreductase; InterPro: IPR0001 97.9
COG3486 436 IucD Lysine/ornithine N-monooxygenase [Secondary m 97.89
KOG4254 561 consensus Phytoene desaturase [Coenzyme transport 97.89
COG1251 793 NirB NAD(P)H-nitrite reductase [Energy production 97.88
COG1206 439 Gid NAD(FAD)-utilizing enzyme possibly involved in 97.85
COG0562 374 Glf UDP-galactopyranose mutase [Cell envelope biog 97.81
KOG3923342 consensus D-aspartate oxidase [Amino acid transpor 97.81
KOG2495 491 consensus NADH-dehydrogenase (ubiquinone) [Energy 97.81
PRK02106 560 choline dehydrogenase; Validated 97.78
TIGR02462 544 pyranose_ox pyranose oxidase. Pyranose oxidase (al 97.76
TIGR03377 516 glycerol3P_GlpA glycerol-3-phosphate dehydrogenase 97.75
KOG3851 446 consensus Sulfide:quinone oxidoreductase/flavo-bin 97.72
PLN02568 539 polyamine oxidase 97.72
PLN02529 738 lysine-specific histone demethylase 1 97.71
PLN02676487 polyamine oxidase 97.69
TIGR02732474 zeta_caro_desat carotene 7,8-desaturase. Carotene 97.62
PF13434341 K_oxygenase: L-lysine 6-monooxygenase (NADPH-requi 97.57
PLN02328 808 lysine-specific histone demethylase 1 homolog 97.57
KOG2960328 consensus Protein involved in thiamine biosynthesi 97.56
COG1251 793 NirB NAD(P)H-nitrite reductase [Energy production 97.55
KOG2755334 consensus Oxidoreductase [General function predict 97.54
TIGR03862 376 flavo_PP4765 uncharacterized flavoprotein, PP_4765 97.51
PLN02487569 zeta-carotene desaturase 97.49
TIGR02352337 thiamin_ThiO glycine oxidase ThiO. This family con 97.47
KOG4716503 consensus Thioredoxin reductase [Posttranslational 97.38
PLN02852491 ferredoxin-NADP+ reductase 97.37
TIGR01810 532 betA choline dehydrogenase. This enzyme is a membe 97.26
COG2303 542 BetA Choline dehydrogenase and related flavoprotei 97.25
PLN03000 881 amine oxidase 97.24
PLN02785 587 Protein HOTHEAD 97.22
PRK01438 480 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 97.22
PRK05675 570 sdhA succinate dehydrogenase flavoprotein subunit; 97.21
COG0446 415 HcaD Uncharacterized NAD(FAD)-dependent dehydrogen 97.19
PF00996438 GDI: GDP dissociation inhibitor; InterPro: IPR0182 97.17
PLN02976 1713 amine oxidase 97.11
KOG1276 491 consensus Protoporphyrinogen oxidase [Coenzyme tra 97.07
TIGR03385 427 CoA_CoA_reduc CoA-disulfide reductase. Members of 97.06
KOG0685 498 consensus Flavin-containing amine oxidase [Coenzym 97.01
PLN02172461 flavin-containing monooxygenase FMO GS-OX 96.62
COG3634520 AhpF Alkyl hydroperoxide reductase, large subunit 96.61
PRK06567 1028 putative bifunctional glutamate synthase subunit b 96.59
KOG1346 659 consensus Programmed cell death 8 (apoptosis-induc 96.56
PF06100500 Strep_67kDa_ant: Streptococcal 67 kDa myosin-cross 96.47
KOG1238 623 consensus Glucose dehydrogenase/choline dehydrogen 96.3
PF01210157 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate 96.16
PF00743531 FMO-like: Flavin-binding monooxygenase-like; Inter 96.08
PF02737180 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind 95.83
COG0569225 TrkA K+ transport systems, NAD-binding component [ 95.44
PF03721185 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen 95.42
PRK02705 459 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 95.39
KOG0404322 consensus Thioredoxin reductase [Posttranslational 95.38
PF02558151 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: 95.28
PRK06249313 2-dehydropantoate 2-reductase; Provisional 94.96
PRK07819286 3-hydroxybutyryl-CoA dehydrogenase; Validated 94.91
TIGR01470205 cysG_Nterm siroheme synthase, N-terminal domain. T 94.87
PRK06129308 3-hydroxyacyl-CoA dehydrogenase; Validated 94.82
PRK06719157 precorrin-2 dehydrogenase; Validated 94.8
PRK14106 450 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 94.79
PRK04148134 hypothetical protein; Provisional 94.79
PF13241103 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ 94.68
TIGR01816 565 sdhA_forward succinate dehydrogenase, flavoprotein 94.4
PRK06718202 precorrin-2 dehydrogenase; Reviewed 94.33
PRK05708305 2-dehydropantoate 2-reductase; Provisional 94.17
TIGR02354200 thiF_fam2 thiamine biosynthesis protein ThiF, fami 94.17
PF13738203 Pyr_redox_3: Pyridine nucleotide-disulphide oxidor 94.14
PRK08293287 3-hydroxybutyryl-CoA dehydrogenase; Validated 94.12
PRK07066321 3-hydroxybutyryl-CoA dehydrogenase; Validated 94.1
PRK09260288 3-hydroxybutyryl-CoA dehydrogenase; Validated 94.04
COG3486436 IucD Lysine/ornithine N-monooxygenase [Secondary m 93.97
PRK12921305 2-dehydropantoate 2-reductase; Provisional 93.91
PF13478136 XdhC_C: XdhC Rossmann domain; PDB: 3ON5_A 2WE8_B 2 93.83
PF00899135 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a 93.76
KOG03992142 consensus Glutamate synthase [Amino acid transport 93.74
PRK06035291 3-hydroxyacyl-CoA dehydrogenase; Validated 93.72
PRK06522304 2-dehydropantoate 2-reductase; Reviewed 93.71
PRK07530292 3-hydroxybutyryl-CoA dehydrogenase; Validated 93.67
PF02254116 TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg 93.59
PF01262168 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal 93.58
PF01488135 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; 93.53
PRK05808282 3-hydroxybutyryl-CoA dehydrogenase; Validated 93.42
TIGR00518370 alaDH alanine dehydrogenase. The family of known L 93.42
PRK09424509 pntA NAD(P) transhydrogenase subunit alpha; Provis 93.34
PRK15116268 sulfur acceptor protein CsdL; Provisional 93.23
PRK12475338 thiamine/molybdopterin biosynthesis MoeB-like prot 93.18
cd00401413 AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado 93.12
TIGR02356202 adenyl_thiF thiazole biosynthesis adenylyltransfer 93.08
cd05292308 LDH_2 A subgroup of L-lactate dehydrogenases. L-la 92.98
PF01593450 Amino_oxidase: Flavin containing amine oxidoreduct 92.97
cd01483143 E1_enzyme_family Superfamily of activating enzymes 92.93
PRK14620326 NAD(P)H-dependent glycerol-3-phosphate dehydrogena 92.87
PRK08229341 2-dehydropantoate 2-reductase; Provisional 92.69
PRK07688339 thiamine/molybdopterin biosynthesis ThiF/MoeB-like 92.64
TIGR02355240 moeB molybdopterin synthase sulfurylase MoeB. This 92.61
COG1004 414 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en 92.59
PRK06130311 3-hydroxybutyryl-CoA dehydrogenase; Validated 92.55
cd01487174 E1_ThiF_like E1_ThiF_like. Member of superfamily o 92.54
PRK14618328 NAD(P)H-dependent glycerol-3-phosphate dehydrogena 92.45
PRK05690245 molybdopterin biosynthesis protein MoeB; Provision 92.39
COG0686371 Ald Alanine dehydrogenase [Amino acid transport an 92.34
KOG4405 547 consensus GDP dissociation inhibitor [Signal trans 92.27
PRK08328231 hypothetical protein; Provisional 92.22
cd00757228 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 92.19
COG5044 434 MRS6 RAB proteins geranylgeranyltransferase compon 92.19
PLN02545295 3-hydroxybutyryl-CoA dehydrogenase 92.14
PLN03209 576 translocon at the inner envelope of chloroplast su 92.12
PRK11064 415 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro 92.11
PRK14619308 NAD(P)H-dependent glycerol-3-phosphate dehydrogena 92.1
TIGR03026 411 NDP-sugDHase nucleotide sugar dehydrogenase. All o 92.07
PRK12549284 shikimate 5-dehydrogenase; Reviewed 91.97
TIGR03736244 PRTRC_ThiF PRTRC system ThiF family protein. A nov 91.94
PRK08644212 thiamine biosynthesis protein ThiF; Provisional 91.93
TIGR02964246 xanthine_xdhC xanthine dehydrogenase accessory pro 91.83
TIGR02733 492 desat_CrtD C-3',4' desaturase CrtD. Members of thi 91.82
TIGR01763305 MalateDH_bact malate dehydrogenase, NAD-dependent. 91.81
PRK00094325 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr 91.72
PF00056141 Ldh_1_N: lactate/malate dehydrogenase, NAD binding 91.58
PRK07417279 arogenate dehydrogenase; Reviewed 91.46
cd01080168 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of 91.41
PRK00066315 ldh L-lactate dehydrogenase; Reviewed 91.41
COG1063350 Tdh Threonine dehydrogenase and related Zn-depende 91.33
cd00755231 YgdL_like Family of activating enzymes (E1) of ubi 91.32
PRK05562223 precorrin-2 dehydrogenase; Provisional 91.08
TIGR00936406 ahcY adenosylhomocysteinase. This enzyme hydrolyze 91.03
TIGR00561511 pntA NAD(P) transhydrogenase, alpha subunit. In so 91.02
TIGR02279 503 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase Pa 90.98
PRK04308 445 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 90.91
PF01593 450 Amino_oxidase: Flavin containing amine oxidoreduct 90.89
PRK08223287 hypothetical protein; Validated 90.89
PRK02472 447 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 90.86
COG0493457 GltD NADPH-dependent glutamate synthase beta chain 90.75
PRK08268 507 3-hydroxy-acyl-CoA dehydrogenase; Validated 90.7
cd05291306 HicDH_like L-2-hydroxyisocapronate dehydrogenases 90.64
cd01492197 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit 90.61
cd05311226 NAD_bind_2_malic_enz NAD(P) binding domain of mali 90.54
PRK07531 495 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe 90.49
cd01485198 E1-1_like Ubiquitin activating enzyme (E1), repeat 90.44
cd01075200 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l 90.27
PRK06223307 malate dehydrogenase; Reviewed 90.23
PRK11730 715 fadB multifunctional fatty acid oxidation complex 90.17
PLN02353 473 probable UDP-glucose 6-dehydrogenase 90.15
PRK03369 488 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 90.15
PRK05476425 S-adenosyl-L-homocysteine hydrolase; Provisional 90.13
TIGR03467419 HpnE squalene-associated FAD-dependent desaturase. 90.1
TIGR01915219 npdG NADPH-dependent F420 reductase. This model re 90.08
PTZ00082321 L-lactate dehydrogenase; Provisional 90.07
PF03446163 NAD_binding_2: NAD binding domain of 6-phosphogluc 90.03
PRK08306296 dipicolinate synthase subunit A; Reviewed 90.01
PRK09496 453 trkA potassium transporter peripheral membrane com 90.0
cd01484234 E1-2_like Ubiquitin activating enzyme (E1), repeat 89.96
TIGR02437 714 FadB fatty oxidation complex, alpha subunit FadB. 89.92
PRK06153393 hypothetical protein; Provisional 89.91
cd01078194 NAD_bind_H4MPT_DH NADP binding domain of methylene 89.86
PRK12548289 shikimate 5-dehydrogenase; Provisional 89.82
PRK10669558 putative cation:proton antiport protein; Provision 89.7
PRK15057 388 UDP-glucose 6-dehydrogenase; Provisional 89.7
PRK01710 458 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 89.64
COG1748 389 LYS9 Saccharopine dehydrogenase and related protei 89.58
cd01488291 Uba3_RUB Ubiquitin activating enzyme (E1) subunit 89.43
cd05293312 LDH_1 A subgroup of L-lactate dehydrogenases. L-la 89.42
>PLN02697 lycopene epsilon cyclase Back     alignment and domain information 
Probab=100.00  E-value=8.6e-51  Score=403.84  Aligned_cols=365  Identities=79%  Similarity=1.243  Sum_probs=301.8

Q ss_pred             CccccccccccccccccccCCCccchhhhhhcccccccccCCCCccccceeecc-----CCCCcccccc-----Cccchh
Q 017240            1 MEYYCLGARNFAAMAVSPFPTGRTRRKALRVRTKQSAVDCNHSSYKVTARATSN-----NAGSESCVAV-----KEEDYI   70 (375)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~-----~~~~~~   70 (375)
                      ||  |+|++|+++||++++|.++.++|+.+.+....  ...     ....++|.     ..+++.|+..     ++++++
T Consensus         1 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (529)
T PLN02697          1 ME--CLGARNFAAMAVSTSPGWSSRRRRPVRRGNDV--RSS-----RGLSCTVVATRGGKSGSESCVVVDEEFADEEDYI   71 (529)
T ss_pred             CC--cccccchhheeeeccCCcCcccccccccccch--hhc-----cCceEEEeeccCcCcCCcceeeeccccccHhhhh
Confidence            99  99999999999999999887777764333222  111     11123332     2577888876     677899


Q ss_pred             hcCCcccccccccCCcchhcccccccCCCCCCCCCCcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcH
Q 017240           71 KAGGSQLVFVQMQQNKSMDKQSKLADKLPPISIGNGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWE  150 (375)
Q Consensus        71 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~  150 (375)
                      +.++.+..++++++.+++.+|+++.+++++++.....+||+||||||||+++|+.|++.|++|+|||+..++.+++|+|.
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DVvIVGaGPAGLalA~~Lak~Gl~V~LIe~~~p~~~n~GvW~  151 (529)
T PLN02697         72 KAGGSELLFVQMQANKSMDEQSKIADKLPPISIGDGTLDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWE  151 (529)
T ss_pred             hccccchhHHHHHhcCCccccccccccCCCCCcccCcccEEEECcCHHHHHHHHHHHhCCCcEEEecCcccCCCccccch
Confidence            99999999999999999999999999999998556779999999999999999999999999999999988889999999


Q ss_pred             HHHHhcCCchhhhhhcccceEEeCCCCCeeecCCceeecHHHHHHHHHHHHHHCCceEEEEEEEEEEEcCCceEEEEecC
Q 017240          151 DEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGRVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEH  230 (375)
Q Consensus       151 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~V~~~~  230 (375)
                      +.++.+++.+.+.+.|....++++.......+.+|+.+++..|.+.|.+.+.+.|+++++++|+++..++++...+.+.+
T Consensus       152 ~~l~~lgl~~~i~~~w~~~~v~~~~~~~~~~~~~Yg~V~R~~L~~~Ll~~a~~~GV~~~~~~V~~I~~~~~~~~vv~~~d  231 (529)
T PLN02697        152 DEFKDLGLEDCIEHVWRDTIVYLDDDKPIMIGRAYGRVSRTLLHEELLRRCVESGVSYLSSKVDRITEASDGLRLVACED  231 (529)
T ss_pred             hHHHhcCcHHHHHhhcCCcEEEecCCceeeccCcccEEcHHHHHHHHHHHHHhcCCEEEeeEEEEEEEcCCcEEEEEEcC
Confidence            99999999888888999888888766665667888899999999999999999999988889999987766333455667


Q ss_pred             CeEEecCEEEEccCCCCccccc---------c------------------------------------------------
Q 017240          231 DMIVPCRLATVASGAASGKLLE---------Y------------------------------------------------  253 (375)
Q Consensus       231 g~~i~a~~vI~A~G~~s~~~~~---------~------------------------------------------------  253 (375)
                      |.++.|+.||+|+|.+|..+.+         +                                                
T Consensus       232 G~~i~A~lVI~AdG~~S~rl~~~~~~~~~~~~Q~a~Gi~ve~~~~~~d~~~~vlMD~r~~~~~~~~~~~~~~p~FlYvlP  311 (529)
T PLN02697        232 GRVIPCRLATVASGAASGRLLQYEVGGPRVCVQTAYGVEVEVENNPYDPSLMVFMDYRDYFKEKVSHLEAEYPTFLYAMP  311 (529)
T ss_pred             CcEEECCEEEECCCcChhhhhccccCCCCcccEEEEEEEEEecCCCCCcchheeeccccccccccccccCCCceEEEEee
Confidence            7789999999999998842200         0                                                


Q ss_pred             --------------------------------------------cCceeeecCCCCCccCCCEEEEccCCCCCCCCChHH
Q 017240          254 --------------------------------------------EEWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYS  289 (375)
Q Consensus       254 --------------------------------------------~~~~~~p~~~~~~~~~~~v~liGdaa~~~~p~~G~G  289 (375)
                                                                  .+++.+|++++++...++++.|||+|+++||+||||
T Consensus       312 ~~~~~~~VE~T~l~~~~~l~~~~l~~~L~~~l~~~Gi~~~~i~~~E~g~iPm~g~~~~~~~~vl~vG~AAG~vhPsTGy~  391 (529)
T PLN02697        312 MSSTRVFFEETCLASKDAMPFDLLKKRLMSRLETMGIRILKTYEEEWSYIPVGGSLPNTEQKNLAFGAAASMVHPATGYS  391 (529)
T ss_pred             cCCCeEEEEEeeeccCCCCCHHHHHHHHHHHHHhCCCCcceEEEEEeeeecCCCCCcccCCCeeEeehhhcCCCCchhhh
Confidence                                                        123445555555566789999999999999999999


Q ss_pred             HHHHHhhHHHHHHHHHHHHhcCCCccccccccchhHHHHHHHHhhCchhhHHHHHHHHHhHHHHhcCCHHHHHHHHHHhh
Q 017240          290 VVRSLSEAPNYASAIAYILKHDHSRGRLTHEQSNENISMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTFF  369 (375)
Q Consensus       290 i~~al~~a~~~a~~i~~~l~~~~~~~~L~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~f~~~~  369 (375)
                      +..++..|+.+|++|+++++.++...... .........+.|..+|+.++.+++.++.||++++..++++++++||++||
T Consensus       392 v~~~l~~A~~~A~~ia~~l~~~~~~~~~~-~~~~~~~~l~~~~~lw~~e~~r~~~~~~~g~~~l~~l~~~~~~~ff~~ff  470 (529)
T PLN02697        392 VVRSLSEAPKYASVIARILKNVSSGGKLG-TSNSSNISMQAWNTLWPQERKRQRAFFLFGLALILQLDTEGIRTFFVTFF  470 (529)
T ss_pred             HHHHHHhHHHHHHHHHHHhhCCccccccc-cccchHHHHHHHHHhChHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence            99999999999999999998664211110 01144678899999999999999999999999999999999999999999


Q ss_pred             cCCCCC
Q 017240          370 RLPKWY  375 (375)
Q Consensus       370 ~l~~~~  375 (375)
                      +||+++
T Consensus       471 ~L~~~~  476 (529)
T PLN02697        471 RLPKWM  476 (529)
T ss_pred             CCCHHH
Confidence            999874

>PLN02463 lycopene beta cyclase Back     alignment and domain information
>TIGR01790 carotene-cycl lycopene cyclase family protein Back     alignment and domain information
>PF05834 Lycopene_cycl: Lycopene cyclase protein; InterPro: IPR008671 This family consists of lycopene beta and epsilon cyclase proteins Back     alignment and domain information
>TIGR02023 BchP-ChlP geranylgeranyl reductase Back     alignment and domain information
>PLN00093 geranylgeranyl diphosphate reductase; Provisional Back     alignment and domain information
>TIGR02028 ChlP geranylgeranyl reductase Back     alignment and domain information
>COG0644 FixC Dehydrogenases (flavoproteins) [Energy production and conversion] Back     alignment and domain information
>PRK08020 ubiF 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed Back     alignment and domain information
>PRK08013 oxidoreductase; Provisional Back     alignment and domain information
>PRK05714 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional Back     alignment and domain information
>COG0654 UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] Back     alignment and domain information
>PRK08773 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Validated Back     alignment and domain information
>PRK10015 oxidoreductase; Provisional Back     alignment and domain information
>PRK07494 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisional Back     alignment and domain information
>PRK08849 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional Back     alignment and domain information
>TIGR01789 lycopene_cycl lycopene cyclase Back     alignment and domain information
>PRK06185 hypothetical protein; Provisional Back     alignment and domain information
>PRK07333 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisional Back     alignment and domain information
>PRK06617 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated Back     alignment and domain information
>PRK08850 2-octaprenyl-6-methoxyphenol hydroxylase; Validated Back     alignment and domain information
>TIGR01989 COQ6 Ubiquinone biosynthesis mono0xygenase COQ6 Back     alignment and domain information
>PRK10157 putative oxidoreductase FixC; Provisional Back     alignment and domain information
>PF01494 FAD_binding_3: FAD binding domain; InterPro: IPR002938 Monooxygenases incorporate one hydroxyl group into substrates and are found in many metabolic pathways Back     alignment and domain information
>PRK06834 hypothetical protein; Provisional Back     alignment and domain information
>PRK07364 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated Back     alignment and domain information
>TIGR01988 Ubi-OHases Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family Back     alignment and domain information
>PRK09126 hypothetical protein; Provisional Back     alignment and domain information
>PRK06996 hypothetical protein; Provisional Back     alignment and domain information
>PRK07045 putative monooxygenase; Reviewed Back     alignment and domain information
>PRK06183 mhpA 3-(3-hydroxyphenyl)propionate hydroxylase; Validated Back     alignment and domain information
>PRK07190 hypothetical protein; Provisional Back     alignment and domain information
>PRK07608 ubiquinone biosynthesis hydroxylase family protein; Provisional Back     alignment and domain information
>TIGR01984 UbiH 2-polyprenyl-6-methoxyphenol 4-hydroxylase Back     alignment and domain information
>PRK08244 hypothetical protein; Provisional Back     alignment and domain information
>PRK11445 putative oxidoreductase; Provisional Back     alignment and domain information
>PRK08243 4-hydroxybenzoate 3-monooxygenase; Validated Back     alignment and domain information
>TIGR02032 GG-red-SF geranylgeranyl reductase family Back     alignment and domain information
>PRK07588 hypothetical protein; Provisional Back     alignment and domain information
>PRK05732 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated Back     alignment and domain information
>PRK06184 hypothetical protein; Provisional Back     alignment and domain information
>PRK07538 hypothetical protein; Provisional Back     alignment and domain information
>TIGR02360 pbenz_hydroxyl 4-hydroxybenzoate 3-monooxygenase Back     alignment and domain information
>PRK08132 FAD-dependent oxidoreductase; Provisional Back     alignment and domain information
>PRK06753 hypothetical protein; Provisional Back     alignment and domain information
>PRK08294 phenol 2-monooxygenase; Provisional Back     alignment and domain information
>PRK08163 salicylate hydroxylase; Provisional Back     alignment and domain information
>PRK06126 hypothetical protein; Provisional Back     alignment and domain information
>PRK06847 hypothetical protein; Provisional Back     alignment and domain information
>PLN02985 squalene monooxygenase Back     alignment and domain information
>PTZ00367 squalene epoxidase; Provisional Back     alignment and domain information
>PRK06475 salicylate hydroxylase; Provisional Back     alignment and domain information
>PRK05868 hypothetical protein; Validated Back     alignment and domain information
>PRK07236 hypothetical protein; Provisional Back     alignment and domain information
>TIGR03219 salicylate_mono salicylate 1-monooxygenase Back     alignment and domain information
>PLN02927 antheraxanthin epoxidase/zeaxanthin epoxidase Back     alignment and domain information
>KOG2614 consensus Kynurenine 3-monooxygenase and related flavoprotein monooxygenases [Energy production and conversion; General function prediction only] Back     alignment and domain information
>PF04820 Trp_halogenase: Tryptophan halogenase; InterPro: IPR006905 Tryptophan halogenase catalyses the chlorination of tryptophan to form 7-chlorotryptophan Back     alignment and domain information
>PRK08255 salicylyl-CoA 5-hydroxylase; Reviewed Back     alignment and domain information
>PRK04176 ribulose-1,5-biphosphate synthetase; Provisional Back     alignment and domain information
>KOG1298 consensus Squalene monooxygenase [Lipid transport and metabolism] Back     alignment and domain information
>COG1635 THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG3855 consensus Monooxygenase involved in coenzyme Q (ubiquinone) biosynthesis [Coenzyme transport and metabolism; Energy production and conversion] Back     alignment and domain information
>TIGR00292 thiazole biosynthesis enzyme Back     alignment and domain information
>COG2081 Predicted flavoproteins [General function prediction only] Back     alignment and domain information
>PF13738 Pyr_redox_3: Pyridine nucleotide-disulphide oxidoreductase; PDB: 3D1C_A 4A9W_B 2YLX_A 2YM2_A 2YLW_A 2YLR_A 2YM1_A 2YLS_A 1W4X_A 2YLT_A Back     alignment and domain information
>KOG2415 consensus Electron transfer flavoprotein ubiquinone oxidoreductase [Energy production and conversion] Back     alignment and domain information
>PF03486 HI0933_like: HI0933-like protein; InterPro: IPR004792 This is a family of conserved hypothetical proteins that may include proteins with a dinucleotide-binding motif (Rossman fold), including oxidoreductases and dehydrogenases Back     alignment and domain information
>PF01946 Thi4: Thi4 family; PDB: 1RP0_A 3FPZ_B 3JSK_K Back     alignment and domain information
>COG0492 TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PLN02172 flavin-containing monooxygenase FMO GS-OX Back     alignment and domain information
>PRK05192 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; Validated Back     alignment and domain information
>TIGR01292 TRX_reduct thioredoxin-disulfide reductase Back     alignment and domain information
>COG2072 TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional Back     alignment and domain information
>PRK12779 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional Back     alignment and domain information
>PF01266 DAO: FAD dependent oxidoreductase; InterPro: IPR006076 This entry includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase (1 Back     alignment and domain information
>TIGR03143 AhpF_homolog putative alkyl hydroperoxide reductase F subunit Back     alignment and domain information
>PF01134 GIDA: Glucose inhibited division protein A; InterPro: IPR002218 GidA is a tRNA modification enzyme found in bacteria and mitochondria Back     alignment and domain information
>PRK12831 putative oxidoreductase; Provisional Back     alignment and domain information
>PF00743 FMO-like: Flavin-binding monooxygenase-like; InterPro: IPR020946 Flavin-containing monooxygenases (FMOs) constitute a family of xenobiotic-metabolising enzymes [] Back     alignment and domain information
>PLN02661 Putative thiazole synthesis Back     alignment and domain information
>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit Back     alignment and domain information
>TIGR00136 gidA glucose-inhibited division protein A Back     alignment and domain information
>PRK10262 thioredoxin reductase; Provisional Back     alignment and domain information
>TIGR03329 Phn_aa_oxid putative aminophosphonate oxidoreductase Back     alignment and domain information
>PRK11259 solA N-methyltryptophan oxidase; Provisional Back     alignment and domain information
>KOG1399 consensus Flavin-containing monooxygenase [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PRK05249 soluble pyridine nucleotide transhydrogenase; Provisional Back     alignment and domain information
>PRK06116 glutathione reductase; Validated Back     alignment and domain information
>PRK11728 hydroxyglutarate oxidase; Provisional Back     alignment and domain information
>TIGR01424 gluta_reduc_2 glutathione-disulfide reductase, plant Back     alignment and domain information
>PRK12775 putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein; Provisional Back     alignment and domain information
>TIGR01377 soxA_mon sarcosine oxidase, monomeric form Back     alignment and domain information
>COG0579 Predicted dehydrogenase [General function prediction only] Back     alignment and domain information
>PRK06416 dihydrolipoamide dehydrogenase; Reviewed Back     alignment and domain information
>PRK05976 dihydrolipoamide dehydrogenase; Validated Back     alignment and domain information
>PRK06467 dihydrolipoamide dehydrogenase; Reviewed Back     alignment and domain information
>PRK09754 phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional Back     alignment and domain information
>PRK09853 putative selenate reductase subunit YgfK; Provisional Back     alignment and domain information
>PRK06116 glutathione reductase; Validated Back     alignment and domain information
>PRK12810 gltD glutamate synthase subunit beta; Reviewed Back     alignment and domain information
>TIGR01421 gluta_reduc_1 glutathione-disulfide reductase, animal/bacterial Back     alignment and domain information
>PTZ00383 malate:quinone oxidoreductase; Provisional Back     alignment and domain information
>PRK14694 putative mercuric reductase; Provisional Back     alignment and domain information
>PRK06481 fumarate reductase flavoprotein subunit; Validated Back     alignment and domain information
>PRK05249 soluble pyridine nucleotide transhydrogenase; Provisional Back     alignment and domain information
>PRK11101 glpA sn-glycerol-3-phosphate dehydrogenase subunit A; Provisional Back     alignment and domain information
>TIGR03315 Se_ygfK putative selenate reductase, YgfK subunit Back     alignment and domain information
>PTZ00058 glutathione reductase; Provisional Back     alignment and domain information
>PLN02507 glutathione reductase Back     alignment and domain information
>TIGR01316 gltA glutamate synthase (NADPH), homotetrameric Back     alignment and domain information
>TIGR01373 soxB sarcosine oxidase, beta subunit family, heterotetrameric form Back     alignment and domain information
>PRK12778 putative bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta; Provisional Back     alignment and domain information
>TIGR01350 lipoamide_DH dihydrolipoamide dehydrogenase Back     alignment and domain information
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed Back     alignment and domain information
>TIGR01421 gluta_reduc_1 glutathione-disulfide reductase, animal/bacterial Back     alignment and domain information
>PRK00711 D-amino acid dehydrogenase small subunit; Validated Back     alignment and domain information
>PRK06115 dihydrolipoamide dehydrogenase; Reviewed Back     alignment and domain information
>PRK01747 mnmC bifunctional tRNA (mnm(5)s(2)U34)-methyltransferase/FAD-dependent cmnm(5)s(2)U34 oxidoreductase; Reviewed Back     alignment and domain information
>PRK13369 glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>PLN02546 glutathione reductase Back     alignment and domain information
>COG1249 Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] Back     alignment and domain information
>PTZ00318 NADH dehydrogenase-like protein; Provisional Back     alignment and domain information
>PRK06416 dihydrolipoamide dehydrogenase; Reviewed Back     alignment and domain information
>COG1249 Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] Back     alignment and domain information
>COG1252 Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] Back     alignment and domain information
>PRK06370 mercuric reductase; Validated Back     alignment and domain information
>PRK06327 dihydrolipoamide dehydrogenase; Validated Back     alignment and domain information
>PLN02507 glutathione reductase Back     alignment and domain information
>PF00890 FAD_binding_2: FAD binding domain of the Pfam family Back     alignment and domain information
>PRK04965 NADH:flavorubredoxin oxidoreductase; Provisional Back     alignment and domain information
>PRK08010 pyridine nucleotide-disulfide oxidoreductase; Provisional Back     alignment and domain information
>PRK13748 putative mercuric reductase; Provisional Back     alignment and domain information
>TIGR01424 gluta_reduc_2 glutathione-disulfide reductase, plant Back     alignment and domain information
>TIGR01423 trypano_reduc trypanothione-disulfide reductase Back     alignment and domain information
>PF12831 FAD_oxidored: FAD dependent oxidoreductase; PDB: 3ADA_A 1VRQ_A 1X31_A 3AD9_A 3AD8_A 3AD7_A 2GAG_A 2GAH_A Back     alignment and domain information
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial Back     alignment and domain information
>PRK07251 pyridine nucleotide-disulfide oxidoreductase; Provisional Back     alignment and domain information
>COG3634 AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK07818 dihydrolipoamide dehydrogenase; Reviewed Back     alignment and domain information
>PRK12409 D-amino acid dehydrogenase small subunit; Provisional Back     alignment and domain information
>PRK07818 dihydrolipoamide dehydrogenase; Reviewed Back     alignment and domain information
>TIGR03364 HpnW_proposed FAD dependent oxidoreductase TIGR03364 Back     alignment and domain information
>PRK06567 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Validated Back     alignment and domain information
>PRK07845 flavoprotein disulfide reductase; Reviewed Back     alignment and domain information
>TIGR03385 CoA_CoA_reduc CoA-disulfide reductase Back     alignment and domain information
>PRK12266 glpD glycerol-3-phosphate dehydrogenase; Reviewed Back     alignment and domain information
>TIGR02053 MerA mercuric reductase Back     alignment and domain information
>COG0493 GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] Back     alignment and domain information
>PRK06370 mercuric reductase; Validated Back     alignment and domain information
>PRK06327 dihydrolipoamide dehydrogenase; Validated Back     alignment and domain information
>PRK07846 mycothione reductase; Reviewed Back     alignment and domain information
>PRK07804 L-aspartate oxidase; Provisional Back     alignment and domain information
>KOG2820 consensus FAD-dependent oxidoreductase [General function prediction only] Back     alignment and domain information
>PRK11749 dihydropyrimidine dehydrogenase subunit A; Provisional Back     alignment and domain information
>PRK08010 pyridine nucleotide-disulfide oxidoreductase; Provisional Back     alignment and domain information
>PRK06912 acoL dihydrolipoamide dehydrogenase; Validated Back     alignment and domain information
>PTZ00153 lipoamide dehydrogenase; Provisional Back     alignment and domain information
>PRK07251 pyridine nucleotide-disulfide oxidoreductase; Provisional Back     alignment and domain information
>TIGR00275 flavoprotein, HI0933 family Back     alignment and domain information
>TIGR02053 MerA mercuric reductase Back     alignment and domain information
>PRK06452 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PRK08274 tricarballylate dehydrogenase; Validated Back     alignment and domain information
>PRK05976 dihydrolipoamide dehydrogenase; Validated Back     alignment and domain information
>PRK06912 acoL dihydrolipoamide dehydrogenase; Validated Back     alignment and domain information
>PLN00128 Succinate dehydrogenase [ubiquinone] flavoprotein subunit Back     alignment and domain information
>PRK08401 L-aspartate oxidase; Provisional Back     alignment and domain information
>TIGR01350 lipoamide_DH dihydrolipoamide dehydrogenase Back     alignment and domain information
>TIGR01423 trypano_reduc trypanothione-disulfide reductase Back     alignment and domain information
>PRK14727 putative mercuric reductase; Provisional Back     alignment and domain information
>PRK09078 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PRK09564 coenzyme A disulfide reductase; Reviewed Back     alignment and domain information
>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional Back     alignment and domain information
>TIGR01813 flavo_cyto_c flavocytochrome c Back     alignment and domain information
>PRK07845 flavoprotein disulfide reductase; Reviewed Back     alignment and domain information
>TIGR03452 mycothione_red mycothione reductase Back     alignment and domain information
>PRK09231 fumarate reductase flavoprotein subunit; Validated Back     alignment and domain information
>PTZ00139 Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional Back     alignment and domain information
>PRK14727 putative mercuric reductase; Provisional Back     alignment and domain information
>PRK06292 dihydrolipoamide dehydrogenase; Validated Back     alignment and domain information
>PLN02464 glycerol-3-phosphate dehydrogenase Back     alignment and domain information
>TIGR01812 sdhA_frdA_Gneg succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup Back     alignment and domain information
>PLN02546 glutathione reductase Back     alignment and domain information
>PRK06175 L-aspartate oxidase; Provisional Back     alignment and domain information
>COG0665 DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR00551 nadB L-aspartate oxidase Back     alignment and domain information
>PRK14989 nitrite reductase subunit NirD; Provisional Back     alignment and domain information
>PRK13512 coenzyme A disulfide reductase; Provisional Back     alignment and domain information
>PRK14694 putative mercuric reductase; Provisional Back     alignment and domain information
>PRK07121 hypothetical protein; Validated Back     alignment and domain information
>PRK07057 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>TIGR01438 TGR thioredoxin and glutathione reductase selenoprotein Back     alignment and domain information
>PRK06467 dihydrolipoamide dehydrogenase; Reviewed Back     alignment and domain information
>PRK06115 dihydrolipoamide dehydrogenase; Reviewed Back     alignment and domain information
>PTZ00058 glutathione reductase; Provisional Back     alignment and domain information
>TIGR02374 nitri_red_nirB nitrite reductase [NAD(P)H], large subunit Back     alignment and domain information
>PRK06069 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PRK13748 putative mercuric reductase; Provisional Back     alignment and domain information
>PRK07846 mycothione reductase; Reviewed Back     alignment and domain information
>PRK07573 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ] Back     alignment and domain information
>PRK08205 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PTZ00052 thioredoxin reductase; Provisional Back     alignment and domain information
>TIGR01320 mal_quin_oxido malate:quinone-oxidoreductase Back     alignment and domain information
>PRK08958 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PRK06292 dihydrolipoamide dehydrogenase; Validated Back     alignment and domain information
>PF13454 NAD_binding_9: FAD-NAD(P)-binding Back     alignment and domain information
>PRK05257 malate:quinone oxidoreductase; Validated Back     alignment and domain information
>TIGR03169 Nterm_to_SelD pyridine nucleotide-disulfide oxidoreductase family protein Back     alignment and domain information
>PRK05945 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PRK08071 L-aspartate oxidase; Provisional Back     alignment and domain information
>PRK06263 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed Back     alignment and domain information
>PRK08641 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PRK06854 adenylylsulfate reductase subunit alpha; Validated Back     alignment and domain information
>PTZ00052 thioredoxin reductase; Provisional Back     alignment and domain information
>PRK13339 malate:quinone oxidoreductase; Reviewed Back     alignment and domain information
>PRK09754 phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional Back     alignment and domain information
>PRK09897 hypothetical protein; Provisional Back     alignment and domain information
>PRK07803 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>TIGR01438 TGR thioredoxin and glutathione reductase selenoprotein Back     alignment and domain information
>PLN02815 L-aspartate oxidase Back     alignment and domain information
>PRK05329 anaerobic glycerol-3-phosphate dehydrogenase subunit B; Validated Back     alignment and domain information
>PRK08275 putative oxidoreductase; Provisional Back     alignment and domain information
>TIGR01176 fum_red_Fp fumarate reductase, flavoprotein subunit Back     alignment and domain information
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional Back     alignment and domain information
>PF07992 Pyr_redox_2: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR023753 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ] Back     alignment and domain information
>PRK07395 L-aspartate oxidase; Provisional Back     alignment and domain information
>PRK08626 fumarate reductase flavoprotein subunit; Provisional Back     alignment and domain information
>TIGR01292 TRX_reduct thioredoxin-disulfide reductase Back     alignment and domain information
>TIGR01372 soxA sarcosine oxidase, alpha subunit family, heterotetrameric form Back     alignment and domain information
>COG0445 GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PRK09564 coenzyme A disulfide reductase; Reviewed Back     alignment and domain information
>TIGR03378 glycerol3P_GlpB glycerol-3-phosphate dehydrogenase, anaerobic, B subunit Back     alignment and domain information
>COG0578 GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] Back     alignment and domain information
>TIGR01317 GOGAT_sm_gam glutamate synthases, NADH/NADPH, small subunit Back     alignment and domain information
>PRK12844 3-ketosteroid-delta-1-dehydrogenase; Reviewed Back     alignment and domain information
>PLN02852 ferredoxin-NADP+ reductase Back     alignment and domain information
>PRK07512 L-aspartate oxidase; Provisional Back     alignment and domain information
>TIGR03452 mycothione_red mycothione reductase Back     alignment and domain information
>KOG1335 consensus Dihydrolipoamide dehydrogenase [Energy production and conversion] Back     alignment and domain information
>PRK13984 putative oxidoreductase; Provisional Back     alignment and domain information
>PRK09077 L-aspartate oxidase; Provisional Back     alignment and domain information
>PRK12845 3-ketosteroid-delta-1-dehydrogenase; Reviewed Back     alignment and domain information
>TIGR01811 sdhA_Bsu succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup Back     alignment and domain information
>PRK12842 putative succinate dehydrogenase; Reviewed Back     alignment and domain information
>PRK07843 3-ketosteroid-delta-1-dehydrogenase; Reviewed Back     alignment and domain information
>PRK06134 putative FAD-binding dehydrogenase; Reviewed Back     alignment and domain information
>TIGR01316 gltA glutamate synthase (NADPH), homotetrameric Back     alignment and domain information
>COG1148 HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] Back     alignment and domain information
>KOG0404 consensus Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK13512 coenzyme A disulfide reductase; Provisional Back     alignment and domain information
>PRK04965 NADH:flavorubredoxin oxidoreductase; Provisional Back     alignment and domain information
>PRK10262 thioredoxin reductase; Provisional Back     alignment and domain information
>PRK12770 putative glutamate synthase subunit beta; Provisional Back     alignment and domain information
>TIGR03169 Nterm_to_SelD pyridine nucleotide-disulfide oxidoreductase family protein Back     alignment and domain information
>PRK12834 putative FAD-binding dehydrogenase; Reviewed Back     alignment and domain information
>PTZ00153 lipoamide dehydrogenase; Provisional Back     alignment and domain information
>PRK11749 dihydropyrimidine dehydrogenase subunit A; Provisional Back     alignment and domain information
>KOG0399 consensus Glutamate synthase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK12835 3-ketosteroid-delta-1-dehydrogenase; Reviewed Back     alignment and domain information
>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit Back     alignment and domain information
>PTZ00318 NADH dehydrogenase-like protein; Provisional Back     alignment and domain information
>PRK12839 hypothetical protein; Provisional Back     alignment and domain information
>COG3380 Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] Back     alignment and domain information
>TIGR02374 nitri_red_nirB nitrite reductase [NAD(P)H], large subunit Back     alignment and domain information
>KOG2853 consensus Possible oxidoreductase [General function prediction only] Back     alignment and domain information
>PRK12837 3-ketosteroid-delta-1-dehydrogenase; Provisional Back     alignment and domain information
>PRK14989 nitrite reductase subunit NirD; Provisional Back     alignment and domain information
>PRK12831 putative oxidoreductase; Provisional Back     alignment and domain information
>COG1233 Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PTZ00306 NADH-dependent fumarate reductase; Provisional Back     alignment and domain information
>PRK12843 putative FAD-binding dehydrogenase; Reviewed Back     alignment and domain information
>TIGR02061 aprA adenosine phosphosulphate reductase, alpha subunit Back     alignment and domain information
>COG0446 HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] Back     alignment and domain information
>PF06039 Mqo: Malate:quinone oxidoreductase (Mqo); InterPro: IPR006231 The membrane-associated enzyme, malate:quinone-oxidoreductase, is an alternative to the better-known NAD-dependent malate dehydrogenase as part of the TCA cycle Back     alignment and domain information
>TIGR02730 carot_isom carotene isomerase Back     alignment and domain information
>PF13434 K_oxygenase: L-lysine 6-monooxygenase (NADPH-requiring); PDB: 3S61_B 3S5W_B Back     alignment and domain information
>PRK12770 putative glutamate synthase subunit beta; Provisional Back     alignment and domain information
>PRK05335 tRNA (uracil-5-)-methyltransferase Gid; Reviewed Back     alignment and domain information
>TIGR02485 CobZ_N-term precorrin 3B synthase CobZ Back     alignment and domain information
>COG0029 NadB Aspartate oxidase [Coenzyme metabolism] Back     alignment and domain information
>KOG0405 consensus Pyridine nucleotide-disulphide oxidoreductase [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional Back     alignment and domain information
>TIGR00137 gid_trmFO tRNA:m(5)U-54 methyltransferase Back     alignment and domain information
>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional Back     alignment and domain information
>KOG2311 consensus NAD/FAD-utilizing protein possibly involved in translation [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG4716 consensus Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK12778 putative bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta; Provisional Back     alignment and domain information
>PRK07233 hypothetical protein; Provisional Back     alignment and domain information
>KOG2844 consensus Dimethylglycine dehydrogenase precursor [Amino acid transport and metabolism] Back     alignment and domain information
>PTZ00188 adrenodoxin reductase; Provisional Back     alignment and domain information
>COG4529 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>COG1252 Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] Back     alignment and domain information
>COG1053 SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] Back     alignment and domain information
>KOG1336 consensus Monodehydroascorbate/ferredoxin reductase [General function prediction only] Back     alignment and domain information
>TIGR02734 crtI_fam phytoene desaturase Back     alignment and domain information
>TIGR03143 AhpF_homolog putative alkyl hydroperoxide reductase F subunit Back     alignment and domain information
>KOG2404 consensus Fumarate reductase, flavoprotein subunit [Energy production and conversion] Back     alignment and domain information
>KOG1335 consensus Dihydrolipoamide dehydrogenase [Energy production and conversion] Back     alignment and domain information
>PLN02612 phytoene desaturase Back     alignment and domain information
>PRK13977 myosin-cross-reactive antigen; Provisional Back     alignment and domain information
>KOG2495 consensus NADH-dehydrogenase (ubiquinone) [Energy production and conversion] Back     alignment and domain information
>PRK11883 protoporphyrinogen oxidase; Reviewed Back     alignment and domain information
>KOG2852 consensus Possible oxidoreductase [General function prediction only] Back     alignment and domain information
>COG2509 Uncharacterized FAD-dependent dehydrogenases [General function prediction only] Back     alignment and domain information
>PRK12779 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional Back     alignment and domain information
>PTZ00363 rab-GDP dissociation inhibitor; Provisional Back     alignment and domain information
>KOG1800 consensus Ferredoxin/adrenodoxin reductase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK13984 putative oxidoreductase; Provisional Back     alignment and domain information
>TIGR02731 phytoene_desat phytoene desaturase Back     alignment and domain information
>PRK09853 putative selenate reductase subunit YgfK; Provisional Back     alignment and domain information
>PF13450 NAD_binding_8: NAD(P)-binding Rossmann-like domain; PDB: 3KA7_A 1V0J_D 3INR_B 3KYB_B 3GF4_A 2BI8_A 3INT_B 1WAM_A 2BI7_A 3MJ4_G Back     alignment and domain information
>PRK12775 putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein; Provisional Back     alignment and domain information
>COG1232 HemY Protoporphyrinogen oxidase [Coenzyme metabolism] Back     alignment and domain information
>COG3075 GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK12416 protoporphyrinogen oxidase; Provisional Back     alignment and domain information
>TIGR01372 soxA sarcosine oxidase, alpha subunit family, heterotetrameric form Back     alignment and domain information
>COG3573 Predicted oxidoreductase [General function prediction only] Back     alignment and domain information
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed Back     alignment and domain information
>TIGR01317 GOGAT_sm_gam glutamate synthases, NADH/NADPH, small subunit Back     alignment and domain information
>COG1231 Monoamine oxidase [Amino acid transport and metabolism] Back     alignment and domain information
>KOG2665 consensus Predicted FAD-dependent oxidoreductase [Function unknown] Back     alignment and domain information
>TIGR03197 MnmC_Cterm tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain Back     alignment and domain information
>TIGR03315 Se_ygfK putative selenate reductase, YgfK subunit Back     alignment and domain information
>KOG1346 consensus Programmed cell death 8 (apoptosis-inducing factor) [Signal transduction mechanisms] Back     alignment and domain information
>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion] Back     alignment and domain information
>KOG0405 consensus Pyridine nucleotide-disulphide oxidoreductase [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>KOG0029 consensus Amine oxidase [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PRK07208 hypothetical protein; Provisional Back     alignment and domain information
>PF08491 SE: Squalene epoxidase; InterPro: IPR013698 This domain is found in squalene epoxidase (SE) and related proteins which are found in taxonomically diverse groups of eukaryotes and also in bacteria Back     alignment and domain information
>COG0492 TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PLN02576 protoporphyrinogen oxidase Back     alignment and domain information
>TIGR00031 UDP-GALP_mutase UDP-galactopyranose mutase Back     alignment and domain information
>COG2907 Predicted NAD/FAD-binding protein [General function prediction only] Back     alignment and domain information
>TIGR02733 desat_CrtD C-3',4' desaturase CrtD Back     alignment and domain information
>COG3349 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PLN02268 probable polyamine oxidase Back     alignment and domain information
>KOG1336 consensus Monodehydroascorbate/ferredoxin reductase [General function prediction only] Back     alignment and domain information
>TIGR00562 proto_IX_ox protoporphyrinogen oxidase Back     alignment and domain information
>PF00732 GMC_oxred_N: GMC oxidoreductase; InterPro: IPR000172 The glucose-methanol-choline (GMC) oxidoreductases are FAD flavoproteins oxidoreductases [, ] Back     alignment and domain information
>COG3486 IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>KOG4254 consensus Phytoene desaturase [Coenzyme transport and metabolism] Back     alignment and domain information
>COG1251 NirB NAD(P)H-nitrite reductase [Energy production and conversion] Back     alignment and domain information
>COG1206 Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>COG0562 Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>KOG3923 consensus D-aspartate oxidase [Amino acid transport and metabolism] Back     alignment and domain information
>KOG2495 consensus NADH-dehydrogenase (ubiquinone) [Energy production and conversion] Back     alignment and domain information
>PRK02106 choline dehydrogenase; Validated Back     alignment and domain information
>TIGR02462 pyranose_ox pyranose oxidase Back     alignment and domain information
>TIGR03377 glycerol3P_GlpA glycerol-3-phosphate dehydrogenase, anaerobic, A subunit Back     alignment and domain information
>KOG3851 consensus Sulfide:quinone oxidoreductase/flavo-binding protein [Energy production and conversion] Back     alignment and domain information
>PLN02568 polyamine oxidase Back     alignment and domain information
>PLN02529 lysine-specific histone demethylase 1 Back     alignment and domain information
>PLN02676 polyamine oxidase Back     alignment and domain information
>TIGR02732 zeta_caro_desat carotene 7,8-desaturase Back     alignment and domain information
>PF13434 K_oxygenase: L-lysine 6-monooxygenase (NADPH-requiring); PDB: 3S61_B 3S5W_B Back     alignment and domain information
>PLN02328 lysine-specific histone demethylase 1 homolog Back     alignment and domain information
>KOG2960 consensus Protein involved in thiamine biosynthesis and DNA damage tolerance [General function prediction only] Back     alignment and domain information
>COG1251 NirB NAD(P)H-nitrite reductase [Energy production and conversion] Back     alignment and domain information
>KOG2755 consensus Oxidoreductase [General function prediction only] Back     alignment and domain information
>TIGR03862 flavo_PP4765 uncharacterized flavoprotein, PP_4765 family Back     alignment and domain information
>PLN02487 zeta-carotene desaturase Back     alignment and domain information
>TIGR02352 thiamin_ThiO glycine oxidase ThiO Back     alignment and domain information
>KOG4716 consensus Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PLN02852 ferredoxin-NADP+ reductase Back     alignment and domain information
>TIGR01810 betA choline dehydrogenase Back     alignment and domain information
>COG2303 BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] Back     alignment and domain information
>PLN03000 amine oxidase Back     alignment and domain information
>PLN02785 Protein HOTHEAD Back     alignment and domain information
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>PRK05675 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>COG0446 HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] Back     alignment and domain information
>PF00996 GDI: GDP dissociation inhibitor; InterPro: IPR018203 Rab proteins constitute a family of small GTPases that serve a regulatory role in vesicular membrane traffic [, ]; C-terminal geranylgeranylation is crucial for their membrane association and function Back     alignment and domain information
>PLN02976 amine oxidase Back     alignment and domain information
>KOG1276 consensus Protoporphyrinogen oxidase [Coenzyme transport and metabolism] Back     alignment and domain information
>TIGR03385 CoA_CoA_reduc CoA-disulfide reductase Back     alignment and domain information
>KOG0685 consensus Flavin-containing amine oxidase [Coenzyme transport and metabolism] Back     alignment and domain information
>PLN02172 flavin-containing monooxygenase FMO GS-OX Back     alignment and domain information
>COG3634 AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK06567 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Validated Back     alignment and domain information
>KOG1346 consensus Programmed cell death 8 (apoptosis-inducing factor) [Signal transduction mechanisms] Back     alignment and domain information
>PF06100 Strep_67kDa_ant: Streptococcal 67 kDa myosin-cross-reactive antigen like family ; InterPro: IPR010354 Members of this family are thought to have structural features in common with the beta chain of the class II antigens, as well as myosin, and may play an important role in the pathogenesis [] Back     alignment and domain information
>KOG1238 consensus Glucose dehydrogenase/choline dehydrogenase/mandelonitrile lyase (GMC oxidoreductase family) [General function prediction only] Back     alignment and domain information
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate Back     alignment and domain information
>PF00743 FMO-like: Flavin-binding monooxygenase-like; InterPro: IPR020946 Flavin-containing monooxygenases (FMOs) constitute a family of xenobiotic-metabolising enzymes [] Back     alignment and domain information
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1 Back     alignment and domain information
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ] Back     alignment and domain information
>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>KOG0404 consensus Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1 Back     alignment and domain information
>PRK06249 2-dehydropantoate 2-reductase; Provisional Back     alignment and domain information
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain Back     alignment and domain information
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated Back     alignment and domain information
>PRK06719 precorrin-2 dehydrogenase; Validated Back     alignment and domain information
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>PRK04148 hypothetical protein; Provisional Back     alignment and domain information
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B Back     alignment and domain information
>TIGR01816 sdhA_forward succinate dehydrogenase, flavoprotein subunit, E Back     alignment and domain information
>PRK06718 precorrin-2 dehydrogenase; Reviewed Back     alignment and domain information
>PRK05708 2-dehydropantoate 2-reductase; Provisional Back     alignment and domain information
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 Back     alignment and domain information
>PF13738 Pyr_redox_3: Pyridine nucleotide-disulphide oxidoreductase; PDB: 3D1C_A 4A9W_B 2YLX_A 2YM2_A 2YLW_A 2YLR_A 2YM1_A 2YLS_A 1W4X_A 2YLT_A Back     alignment and domain information
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>COG3486 IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK12921 2-dehydropantoate 2-reductase; Provisional Back     alignment and domain information
>PF13478 XdhC_C: XdhC Rossmann domain; PDB: 3ON5_A 2WE8_B 2WE7_A Back     alignment and domain information
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP Back     alignment and domain information
>KOG0399 consensus Glutamate synthase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated Back     alignment and domain information
>PRK06522 2-dehydropantoate 2-reductase; Reviewed Back     alignment and domain information
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus Back     alignment and domain information
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1 Back     alignment and domain information
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases Back     alignment and domain information
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>TIGR00518 alaDH alanine dehydrogenase Back     alignment and domain information
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional Back     alignment and domain information
>PRK15116 sulfur acceptor protein CsdL; Provisional Back     alignment and domain information
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional Back     alignment and domain information
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) Back     alignment and domain information
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E Back     alignment and domain information
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases Back     alignment and domain information
>PF01593 Amino_oxidase: Flavin containing amine oxidoreductase This is a subset of the Pfam family; InterPro: IPR002937 This entry consists of various amine oxidases, including maize polyamine oxidase (PAO) [], L-amino acid oxidases (LAO) and various flavin containing monoamine oxidases (MAO) Back     alignment and domain information
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins Back     alignment and domain information
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>PRK08229 2-dehydropantoate 2-reductase; Provisional Back     alignment and domain information
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated Back     alignment and domain information
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB Back     alignment and domain information
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>cd01487 E1_ThiF_like E1_ThiF_like Back     alignment and domain information
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional Back     alignment and domain information
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism] Back     alignment and domain information
>KOG4405 consensus GDP dissociation inhibitor [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PRK08328 hypothetical protein; Provisional Back     alignment and domain information
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA Back     alignment and domain information
>COG5044 MRS6 RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase Back     alignment and domain information
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional Back     alignment and domain information
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional Back     alignment and domain information
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase Back     alignment and domain information
>PRK12549 shikimate 5-dehydrogenase; Reviewed Back     alignment and domain information
>TIGR03736 PRTRC_ThiF PRTRC system ThiF family protein Back     alignment and domain information
>PRK08644 thiamine biosynthesis protein ThiF; Provisional Back     alignment and domain information
>TIGR02964 xanthine_xdhC xanthine dehydrogenase accessory protein XdhC Back     alignment and domain information
>TIGR02733 desat_CrtD C-3',4' desaturase CrtD Back     alignment and domain information
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent Back     alignment and domain information
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated Back     alignment and domain information
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] Back     alignment and domain information
>PRK07417 arogenate dehydrogenase; Reviewed Back     alignment and domain information
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase Back     alignment and domain information
>PRK00066 ldh L-lactate dehydrogenase; Reviewed Back     alignment and domain information
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] Back     alignment and domain information
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E Back     alignment and domain information
>PRK05562 precorrin-2 dehydrogenase; Provisional Back     alignment and domain information
>TIGR00936 ahcY adenosylhomocysteinase Back     alignment and domain information
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit Back     alignment and domain information
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC Back     alignment and domain information
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>PF01593 Amino_oxidase: Flavin containing amine oxidoreductase This is a subset of the Pfam family; InterPro: IPR002937 This entry consists of various amine oxidases, including maize polyamine oxidase (PAO) [], L-amino acid oxidases (LAO) and various flavin containing monoamine oxidases (MAO) Back     alignment and domain information
>PRK08223 hypothetical protein; Validated Back     alignment and domain information
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>COG0493 GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] Back     alignment and domain information
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated Back     alignment and domain information
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases Back     alignment and domain information
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 Back     alignment and domain information
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2 Back     alignment and domain information
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated Back     alignment and domain information
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like Back     alignment and domain information
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase Back     alignment and domain information
>PRK06223 malate dehydrogenase; Reviewed Back     alignment and domain information
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed Back     alignment and domain information
>PLN02353 probable UDP-glucose 6-dehydrogenase Back     alignment and domain information
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional Back     alignment and domain information
>TIGR03467 HpnE squalene-associated FAD-dependent desaturase Back     alignment and domain information
>TIGR01915 npdG NADPH-dependent F420 reductase Back     alignment and domain information
>PTZ00082 L-lactate dehydrogenase; Provisional Back     alignment and domain information
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 Back     alignment and domain information
>PRK08306 dipicolinate synthase subunit A; Reviewed Back     alignment and domain information
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed Back     alignment and domain information
>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like Back     alignment and domain information
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB Back     alignment and domain information
>PRK06153 hypothetical protein; Provisional Back     alignment and domain information
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase Back     alignment and domain information
>PRK12548 shikimate 5-dehydrogenase; Provisional Back     alignment and domain information
>PRK10669 putative cation:proton antiport protein; Provisional Back     alignment and domain information
>PRK15057 UDP-glucose 6-dehydrogenase; Provisional Back     alignment and domain information
>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] Back     alignment and domain information
>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3 Back     alignment and domain information
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query375
3nix_A 421 Flavoprotein/dehydrogenase; structural genomics, P 3e-08
3cgv_A 397 Geranylgeranyl reductase related protein; NP_39399 3e-07
3i3l_A 591 Alkylhalidase CMLS; flavin-dependent halogenase, c 4e-06
3e1t_A 512 Halogenase; flavoprotein; HET: FAD; 2.05A {Chondro 6e-06
3atr_A 453 Conserved archaeal protein; saturating double bond 2e-05
2x3n_A 399 Probable FAD-dependent monooxygenase; oxidoreducta 2e-05
1zk7_A 467 HGII, reductase, mercuric reductase; mercuric ION 4e-04
3c4a_A 381 Probable tryptophan hydroxylase VIOD; alpha-beta p 4e-04
1onf_A 500 GR, grase, glutathione reductase; oxidoreductase; 5e-04
3dgh_A 483 TRXR-1, thioredoxin reductase 1, mitochondrial; ox 9e-04
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii} Length = 421 Back     alignment and structure
 Score = 54.0 bits (130), Expect = 3e-08
 Identities = 30/186 (16%), Positives = 54/186 (29%), Gaps = 35/186 (18%)

Query: 109 DLVVIGCGPAGLALAAESAKLGLNVGLI-----------GPDLPFTNNYGVWEDEFRDLG 157
           D++VIG GPAG   A+   K G  V ++              LP    +        + G
Sbjct: 7   DVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEH------LDEAG 60

Query: 158 LEGCIE-----------HVWRDTVVYIDEDEPILIGRAYG-RVSRHLLHEELLRRCVESG 205
               ++            V    +   +  +    G  +  +V R    + L       G
Sbjct: 61  FLDAVKAQGFQQKFGAKFVRGKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQG 120

Query: 206 VSYL-SSKVESITESTSGHRLVACEHD---MIVPCRLATVASGAAS--GKLLEYEEWSYI 259
           V       V  I    +       + +     +  R    ASG      ++   ++ S  
Sbjct: 121 VDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGRVIPRMFGLDKPSGF 180

Query: 260 PVGGSL 265
               +L
Sbjct: 181 ESRRTL 186
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae} Length = 591 Back     alignment and structure
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus} Length = 512 Back     alignment and structure
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A* Length = 453 Back     alignment and structure
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa} Length = 399 Back     alignment and structure
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A* Length = 467 Back     alignment and structure
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472} Length = 381 Back     alignment and structure
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Length = 500 Back     alignment and structure
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A* Length = 483 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query375
3oz2_A397 Digeranylgeranylglycerophospholipid reductase; str 99.97
3cgv_A397 Geranylgeranyl reductase related protein; NP_39399 99.94
3atr_A453 Conserved archaeal protein; saturating double bond 99.92
3rp8_A407 Flavoprotein monooxygenase; FAD-binding protein, o 99.91
3nix_A421 Flavoprotein/dehydrogenase; structural genomics, P 99.91
3fmw_A 570 Oxygenase; mithramycin, baeyer-villiger, flavin bi 99.9
3e1t_A 512 Halogenase; flavoprotein; HET: FAD; 2.05A {Chondro 99.9
4hb9_A412 Similarities with probable monooxygenase; flavin, 99.9
3ihg_A 535 RDME; flavoenzyme, anthracycline, polyketide biosy 99.9
2qa2_A 499 CABE, polyketide oxygenase CABE; FAD, angucycline, 99.9
2qa1_A 500 PGAE, polyketide oxygenase PGAE; FAD, angucycline, 99.89
1k0i_A394 P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, h 99.89
3i3l_A 591 Alkylhalidase CMLS; flavin-dependent halogenase, c 99.89
2x3n_A399 Probable FAD-dependent monooxygenase; oxidoreducta 99.86
2r0c_A 549 REBC; flavin adenine dinucleotide, monooxygenase, 99.85
2gmh_A 584 Electron transfer flavoprotein-ubiquinone oxidored 99.84
3c96_A 410 Flavin-containing monooxygenase; FAD, oxidoreducta 99.84
2dkh_A 639 3-hydroxybenzoate hydroxylase; flavoprotein, monoo 99.84
1pn0_A 665 Phenol 2-monooxygenase; two dimers, TLS refinement 99.84
2xdo_A398 TETX2 protein; tetracycline degradation, tigecycli 99.84
2vou_A 397 2,6-dihydroxypyridine hydroxylase; oxidoreductase, 99.82
3alj_A379 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; 99.81
2aqj_A 538 Tryptophan halogenase, pRNA; flavin-dependent halo 99.79
2pyx_A526 Tryptophan halogenase; structural genomics, JOI fo 99.79
2e4g_A550 Tryptophan halogenase; flavin-binding, rebeccamyci 99.77
2weu_A511 Tryptophan 5-halogenase; regioselectivity, antifun 99.76
3c4a_A381 Probable tryptophan hydroxylase VIOD; alpha-beta p 99.74
2ywl_A180 Thioredoxin reductase related protein; uncharacter 99.71
4fk1_A304 Putative thioredoxin reductase; structural genomic 99.65
2cul_A232 Glucose-inhibited division protein A-related PROT 99.63
2bry_A 497 NEDD9 interacting protein with calponin homology a 99.63
4gcm_A312 TRXR, thioredoxin reductase; FAD/NAD-linked reduct 99.62
4a5l_A314 Thioredoxin reductase; oxidoreductase, redox metab 99.6
3ihm_A 430 Styrene monooxygenase A; rossman fold, anti-parall 99.6
4a9w_A357 Monooxygenase; baeyer-villiger, FAD, oxidoreductas 99.58
3v76_A 417 Flavoprotein; structural genomics, PSI-biology, NE 99.57
1yvv_A336 Amine oxidase, flavin-containing; oxidoreductase, 99.54
2zbw_A335 Thioredoxin reductase; redox protein, oxidoreducta 99.52
3fbs_A297 Oxidoreductase; structural genomics, PSI2, MCSG, p 99.52
3gwf_A 540 Cyclohexanone monooxygenase; flavoprotein biocatal 99.52
3ab1_A 360 Ferredoxin--NADP reductase; oxidoreductase, electr 99.52
4ap3_A 549 Steroid monooxygenase; oxidoreductase, baeyer-vill 99.5
3dme_A369 Conserved exported protein; structural genomics, P 99.5
2i0z_A 447 NAD(FAD)-utilizing dehydrogenases; structural geno 99.5
1qo8_A 566 Flavocytochrome C3 fumarate reductase; oxidoreduct 99.5
1y56_B382 Sarcosine oxidase; dehydrogenase, protein-protein 99.5
3d1c_A369 Flavin-containing putative monooxygenase; NP_37310 99.49
2gv8_A 447 Monooxygenase; FMO, FAD, NADPH, cofactor complex, 99.49
3ces_A 651 MNMG, tRNA uridine 5-carboxymethylaminomethyl modi 99.49
2zxi_A 637 TRNA uridine 5-carboxymethylaminomethyl modificat 99.48
3lzw_A332 Ferredoxin--NADP reductase 2; ferredoxin reductase 99.48
3ps9_A676 TRNA 5-methylaminomethyl-2-thiouridine biosynthes 99.48
3nlc_A 549 Uncharacterized protein VP0956; FAD-binding protei 99.48
1w4x_A 542 Phenylacetone monooxygenase; baeyer-villiger, FAD; 99.47
3f8d_A323 Thioredoxin reductase (TRXB-3); redox protein, nuc 99.46
2uzz_A372 N-methyl-L-tryptophan oxidase; N-methyltryptophan 99.46
2gag_B405 Heterotetrameric sarcosine oxidase beta-subunit; f 99.46
2q0l_A311 TRXR, thioredoxin reductase; bacterial thiredoxin 99.46
2q7v_A325 Thioredoxin reductase; rossman fold, FAD, flavopro 99.46
2gqf_A 401 Hypothetical protein HI0933; structural genomics, 99.45
3jsk_A344 Cypbp37 protein; octameric thiazole synthase, bios 99.45
1rp0_A284 ARA6, thiazole biosynthetic enzyme; protein ligand 99.45
3uox_A 545 Otemo; baeyer-villiger monooxygenase, oxidoreducta 99.45
3dje_A438 Fructosyl amine: oxygen oxidoreductase; fructosyl- 99.45
3pvc_A689 TRNA 5-methylaminomethyl-2-thiouridine biosynthes 99.44
1y0p_A 571 Fumarate reductase flavoprotein subunit; flavocyto 99.44
2xve_A 464 Flavin-containing monooxygenase; oxidoreductase; H 99.44
3nyc_A381 D-arginine dehydrogenase; FAD, imino-arginine, oxi 99.44
2gf3_A389 MSOX, monomeric sarcosine oxidase; flavoprotein ox 99.43
2oln_A397 NIKD protein; flavoprotein, rossmann fold, oxidore 99.43
3itj_A338 Thioredoxin reductase 1; disulfide B flavoprotein, 99.43
1ryi_A382 Glycine oxidase; flavoprotein, protein-inhibitor c 99.42
1vdc_A333 NTR, NADPH dependent thioredoxin reductase; hypoth 99.42
1fl2_A310 Alkyl hydroperoxide reductase subunit F; reactive 99.41
3cp8_A 641 TRNA uridine 5-carboxymethylaminomethyl modificati 99.4
3cty_A319 Thioredoxin reductase; FAD, oxidoreductase, flavin 99.4
2gjc_A326 Thiazole biosynthetic enzyme, mitochondrial; gluta 99.4
1hyu_A521 AHPF, alkyl hydroperoxide reductase subunit F; thi 99.38
3kkj_A336 Amine oxidase, flavin-containing; oxidoreductase, 99.38
2a87_A335 TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TL 99.38
2yqu_A455 2-oxoglutarate dehydrogenase E3 component; lipoami 99.37
1ges_A450 Glutathione reductase; oxidoreductase(flavoenzyme) 99.37
1trb_A320 Thioredoxin reductase; oxidoreductase(flavoenzyme) 99.37
1d4d_A 572 Flavocytochrome C fumarate reductase; oxidoreducta 99.36
2eq6_A464 Pyruvate dehydrogenase complex, dihydrolipoamide d 99.34
3s5w_A 463 L-ornithine 5-monooxygenase; class B flavin depend 99.34
3c4n_A405 Uncharacterized protein DR_0571; alpha-beta protei 99.34
2vdc_G 456 Glutamate synthase [NADPH] small chain; oxidoreduc 99.32
2qcu_A 501 Aerobic glycerol-3-phosphate dehydrogenase; glycer 99.32
1v59_A478 Dihydrolipoamide dehydrogenase; 2-oxoacid dehydrog 99.32
2r9z_A463 Glutathione amide reductase; NAD, FAD, substrate s 99.31
3hyw_A 430 Sulfide-quinone reductase; monotopic membrane prot 99.31
3da1_A 561 Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9 99.31
4at0_A 510 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidore 99.3
3r9u_A315 Thioredoxin reductase; structural genomics, center 99.3
1ebd_A455 E3BD, dihydrolipoamide dehydrogenase; redox-active 99.3
2hqm_A479 GR, grase, glutathione reductase; glutathione redu 99.29
3axb_A448 Putative oxidoreductase; dinucleotide-binding fold 99.29
1mo9_A523 ORF3; nucleotide binding motifs, nucleotide bindin 99.28
2wdq_A 588 Succinate dehydrogenase flavoprotein subunit; succ 99.28
1fec_A490 Trypanothione reductase; redox-active center, oxid 99.28
3fg2_P404 Putative rubredoxin reductase; ferredoxin reductas 99.28
2wpf_A495 Trypanothione reductase; oxidoreductase, trypanoso 99.27
3lxd_A415 FAD-dependent pyridine nucleotide-disulphide oxido 99.27
3iwa_A472 FAD-dependent pyridine nucleotide-disulphide oxido 99.27
3o0h_A484 Glutathione reductase; ssgcid, structur genomics, 99.26
3klj_A 385 NAD(FAD)-dependent dehydrogenase, NIRB-family (N- 99.26
1pj5_A 830 N,N-dimethylglycine oxidase; channelling, FAD bind 99.26
1zmd_A474 Dihydrolipoyl dehydrogenase; lipoamide dehydrogena 99.26
3ntd_A 565 FAD-dependent pyridine nucleotide-disulphide oxido 99.26
1onf_A500 GR, grase, glutathione reductase; oxidoreductase; 99.26
1q1r_A431 Putidaredoxin reductase; glutathione reductase fol 99.26
4dna_A463 Probable glutathione reductase; structural genomic 99.26
1ojt_A482 Surface protein; redox-active center, glycolysis, 99.26
1xdi_A499 RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno fun 99.26
1nhp_A447 NADH peroxidase; oxidoreductase (H2O2(A)); HET: FA 99.25
2v3a_A384 Rubredoxin reductase; alkane degradation, NADH oxi 99.25
2a8x_A464 Dihydrolipoyl dehydrogenase, E3 component of alpha 99.25
2h88_A 621 Succinate dehydrogenase flavoprotein subunit; comp 99.24
3cgb_A480 Pyridine nucleotide-disulfide oxidoreductase, CLA; 99.24
3vrd_B 401 FCCB subunit, flavocytochrome C flavin subunit; su 99.24
3urh_A 491 Dihydrolipoyl dehydrogenase; PSI-biology, structur 99.24
2cdu_A452 NADPH oxidase; flavoenzyme, oxidoreductase; HET: F 99.23
1trb_A320 Thioredoxin reductase; oxidoreductase(flavoenzyme) 99.23
2qae_A468 Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystin 99.23
3l8k_A 466 Dihydrolipoyl dehydrogenase; redox-active center, 99.23
1chu_A 540 Protein (L-aspartate oxidase); flavoenzyme, NAD bi 99.23
1dxl_A470 Dihydrolipoamide dehydrogenase; oxidoreductase, mu 99.23
2bc0_A490 NADH oxidase; flavoprotein, pyridine nucleotide di 99.22
3urh_A491 Dihydrolipoyl dehydrogenase; PSI-biology, structur 99.22
3dk9_A478 Grase, GR, glutathione reductase; flavoenzyme, nic 99.22
1lvl_A458 Dihydrolipoamide dehydrogenase; oxidoreductase; HE 99.21
3ef6_A410 Toluene 1,2-dioxygenase system ferredoxin--NAD(+) 99.21
3o0h_A 484 Glutathione reductase; ssgcid, structur genomics, 99.21
2gqw_A408 Ferredoxin reductase; flavoprotein, oxidoreductase 99.21
3oc4_A452 Oxidoreductase, pyridine nucleotide-disulfide FAM; 99.21
4eqs_A437 Coenzyme A disulfide reductase; oxidoreductase; HE 99.21
4b1b_A 542 TRXR, thioredoxin reductase; oxidoreductase, FAD, 99.2
4b63_A 501 L-ornithine N5 monooxygenase; oxidoreductase, side 99.2
1v59_A 478 Dihydrolipoamide dehydrogenase; 2-oxoacid dehydrog 99.2
4g6h_A502 Rotenone-insensitive NADH-ubiquinone oxidoreducta 99.2
2e5v_A 472 L-aspartate oxidase; archaea, oxidoreductase; HET: 99.2
1kf6_A 602 Fumarate reductase flavoprotein; respiration, fuma 99.2
3ics_A 588 Coenzyme A-disulfide reductase; pyridine nucleotid 99.2
3ic9_A492 Dihydrolipoamide dehydrogenase; APC62701, colwelli 99.2
3lad_A476 Dihydrolipoamide dehydrogenase; oxidoreductase; HE 99.2
3qfa_A 519 Thioredoxin reductase 1, cytoplasmic; protein-prot 99.2
3cty_A319 Thioredoxin reductase; FAD, oxidoreductase, flavin 99.2
2qae_A 468 Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystin 99.2
2a8x_A 464 Dihydrolipoyl dehydrogenase, E3 component of alpha 99.2
1dxl_A 470 Dihydrolipoamide dehydrogenase; oxidoreductase, mu 99.19
1ojt_A 482 Surface protein; redox-active center, glycolysis, 99.19
1zk7_A467 HGII, reductase, mercuric reductase; mercuric ION 99.19
1zmd_A 474 Dihydrolipoyl dehydrogenase; lipoamide dehydrogena 99.19
1zk7_A 467 HGII, reductase, mercuric reductase; mercuric ION 99.19
3dgz_A 488 Thioredoxin reductase 2; oxidoreductase, rossmann, 99.19
3itj_A338 Thioredoxin reductase 1; disulfide B flavoprotein, 99.19
3oc4_A 452 Oxidoreductase, pyridine nucleotide-disulfide FAM; 99.18
3lad_A 476 Dihydrolipoamide dehydrogenase; oxidoreductase; HE 99.18
3qj4_A342 Renalase; FAD/NAD(P)-binding rossmann fold superfa 99.17
1ebd_A 455 E3BD, dihydrolipoamide dehydrogenase; redox-active 99.16
3kd9_A 449 Coenzyme A disulfide reductase; PSI-II, NYSGXRC, o 99.16
1fl2_A310 Alkyl hydroperoxide reductase subunit F; reactive 99.16
3ka7_A425 Oxidoreductase; structural genomics, PSI-2, protei 99.15
2rgh_A 571 Alpha-glycerophosphate oxidase; flavoprotein oxida 99.15
2bs2_A 660 Quinol-fumarate reductase flavoprotein subunit A; 99.15
3ab1_A360 Ferredoxin--NADP reductase; oxidoreductase, electr 99.15
4b1b_A542 TRXR, thioredoxin reductase; oxidoreductase, FAD, 99.14
4dna_A 463 Probable glutathione reductase; structural genomic 99.14
4dgk_A501 Phytoene dehydrogenase; the FAD/NAD(P)-binding ros 99.14
2q0l_A311 TRXR, thioredoxin reductase; bacterial thiredoxin 99.14
2bc0_A 490 NADH oxidase; flavoprotein, pyridine nucleotide di 99.14
3fpz_A326 Thiazole biosynthetic enzyme; FAD, mitochondrion, 99.13
3dgh_A483 TRXR-1, thioredoxin reductase 1, mitochondrial; ox 99.13
3ef6_A 410 Toluene 1,2-dioxygenase system ferredoxin--NAD(+) 99.13
2zbw_A335 Thioredoxin reductase; redox protein, oxidoreducta 99.13
3ic9_A 492 Dihydrolipoamide dehydrogenase; APC62701, colwelli 99.13
3i6d_A470 Protoporphyrinogen oxidase; protein-inhibitor comp 99.12
1xhc_A367 NADH oxidase /nitrite reductase; southe collaborat 99.11
3nrn_A421 Uncharacterized protein PF1083; alpha-beta protein 99.11
3dk9_A 478 Grase, GR, glutathione reductase; flavoenzyme, nic 99.11
1gte_A 1025 Dihydropyrimidine dehydrogenase; electron transfer 99.11
2yqu_A 455 2-oxoglutarate dehydrogenase E3 component; lipoami 99.11
3r9u_A315 Thioredoxin reductase; structural genomics, center 99.11
3cgb_A 480 Pyridine nucleotide-disulfide oxidoreductase, CLA; 99.11
3gyx_A 662 Adenylylsulfate reductase; oxidoreductase; HET: FA 99.1
3dgz_A488 Thioredoxin reductase 2; oxidoreductase, rossmann, 99.1
3kd9_A449 Coenzyme A disulfide reductase; PSI-II, NYSGXRC, o 99.1
3f8d_A323 Thioredoxin reductase (TRXB-3); redox protein, nuc 99.1
2q7v_A325 Thioredoxin reductase; rossman fold, FAD, flavopro 99.09
1m6i_A493 Programmed cell death protein 8; apoptosis, AIF, o 99.09
3ics_A 588 Coenzyme A-disulfide reductase; pyridine nucleotid 99.09
1jnr_A 643 Adenylylsulfate reductase; oxidoreductase; HET: FA 99.09
3dgh_A 483 TRXR-1, thioredoxin reductase 1, mitochondrial; ox 99.09
1xhc_A 367 NADH oxidase /nitrite reductase; southe collaborat 99.08
1lvl_A 458 Dihydrolipoamide dehydrogenase; oxidoreductase; HE 99.08
1q1r_A 431 Putidaredoxin reductase; glutathione reductase fol 99.08
3sx6_A 437 Sulfide-quinone reductase, putative; sulfide:quino 99.07
2hqm_A 479 GR, grase, glutathione reductase; glutathione redu 99.07
3lxd_A 415 FAD-dependent pyridine nucleotide-disulphide oxido 99.06
1xdi_A 499 RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno fun 99.05
3ntd_A 565 FAD-dependent pyridine nucleotide-disulphide oxido 99.05
1fec_A 490 Trypanothione reductase; redox-active center, oxid 99.03
2r9z_A 463 Glutathione amide reductase; NAD, FAD, substrate s 99.03
3fbs_A297 Oxidoreductase; structural genomics, PSI2, MCSG, p 99.03
3d1c_A369 Flavin-containing putative monooxygenase; NP_37310 99.03
1vdc_A333 NTR, NADPH dependent thioredoxin reductase; hypoth 99.02
2v3a_A 384 Rubredoxin reductase; alkane degradation, NADH oxi 99.02
1onf_A 500 GR, grase, glutathione reductase; oxidoreductase; 99.01
1ges_A 450 Glutathione reductase; oxidoreductase(flavoenzyme) 99.01
3lzw_A332 Ferredoxin--NADP reductase 2; ferredoxin reductase 99.01
2eq6_A 464 Pyruvate dehydrogenase complex, dihydrolipoamide d 99.01
2wpf_A 495 Trypanothione reductase; oxidoreductase, trypanoso 99.0
2x8g_A 598 Thioredoxin glutathione reductase; redox-active ce 99.0
3l8k_A466 Dihydrolipoyl dehydrogenase; redox-active center, 98.99
3g3e_A351 D-amino-acid oxidase; FAD, flavoprotein, oxidoredu 98.99
1c0p_A363 D-amino acid oxidase; alpha-beta-alpha motif, flav 98.98
1nhp_A 447 NADH peroxidase; oxidoreductase (H2O2(A)); HET: FA 98.98
3h28_A 430 Sulfide-quinone reductase; monotopic membrane prot 98.98
3qfa_A519 Thioredoxin reductase 1, cytoplasmic; protein-prot 98.98
2cdu_A 452 NADPH oxidase; flavoenzyme, oxidoreductase; HET: F 98.98
2x8g_A598 Thioredoxin glutathione reductase; redox-active ce 98.97
3k7m_X431 6-hydroxy-L-nicotine oxidase; enantiomeric substra 98.97
2gqw_A 408 Ferredoxin reductase; flavoprotein, oxidoreductase 98.96
3fg2_P 404 Putative rubredoxin reductase; ferredoxin reductas 98.96
1hyu_A521 AHPF, alkyl hydroperoxide reductase subunit F; thi 98.96
3nks_A477 Protoporphyrinogen oxidase; FAD containing protein 98.96
1mo9_A 523 ORF3; nucleotide binding motifs, nucleotide bindin 98.95
3h8l_A 409 NADH oxidase; membrane protein, complete form, ros 98.95
4gde_A 513 UDP-galactopyranose mutase; flavin adenine dinucle 98.94
2gag_A 965 Heterotetrameric sarcosine oxidase alpha-subunit; 98.94
2a87_A335 TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TL 98.94
4eqs_A 437 Coenzyme A disulfide reductase; oxidoreductase; HE 98.94
3iwa_A 472 FAD-dependent pyridine nucleotide-disulphide oxido 98.93
2ivd_A 478 PPO, PPOX, protoporphyrinogen oxidase; porphyrin b 98.9
2vvm_A495 Monoamine oxidase N; FAD, peroxisome, flavoprotein 98.9
3klj_A385 NAD(FAD)-dependent dehydrogenase, NIRB-family (N- 98.89
1lqt_A 456 FPRA; NADP+ derivative, oxidoreductase, structural 98.89
1y56_A 493 Hypothetical protein PH1363; dehydrogenase, protei 98.87
3k30_A690 Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP bi 98.87
3lov_A475 Protoporphyrinogen oxidase; structural genomics, J 98.86
1s3e_A 520 Amine oxidase [flavin-containing] B; human monoami 98.84
1m6i_A 493 Programmed cell death protein 8; apoptosis, AIF, o 98.82
1ps9_A671 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel 98.81
4g6h_A 502 Rotenone-insensitive NADH-ubiquinone oxidoreducta 98.79
2yg5_A 453 Putrescine oxidase; oxidoreductase, flavin; HET: F 98.79
2vdc_G456 Glutamate synthase [NADPH] small chain; oxidoreduc 98.79
3h8l_A409 NADH oxidase; membrane protein, complete form, ros 98.78
3h28_A430 Sulfide-quinone reductase; monotopic membrane prot 98.76
1cjc_A 460 Protein (adrenodoxin reductase); flavoenzyme, MAD 98.76
3s5w_A463 L-ornithine 5-monooxygenase; class B flavin depend 98.75
3sx6_A437 Sulfide-quinone reductase, putative; sulfide:quino 98.75
3p1w_A475 Rabgdi protein; GDI RAB, malaria, structural genom 98.73
1gte_A 1025 Dihydropyrimidine dehydrogenase; electron transfer 98.7
1o94_A729 Tmadh, trimethylamine dehydrogenase; electron tran 98.68
4gut_A776 Lysine-specific histone demethylase 1B; histone de 98.68
4a9w_A357 Monooxygenase; baeyer-villiger, FAD, oxidoreductas 98.66
3g5s_A 443 Methylenetetrahydrofolate--tRNA-(uracil-5-)- methy 98.66
2gag_A 965 Heterotetrameric sarcosine oxidase alpha-subunit; 98.62
1cjc_A460 Protein (adrenodoxin reductase); flavoenzyme, MAD 98.57
3k30_A690 Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP bi 98.56
1b37_A472 Protein (polyamine oxidase); flavin-dependent amin 98.49
1lqt_A456 FPRA; NADP+ derivative, oxidoreductase, structural 98.44
1ps9_A671 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel 98.39
3q9t_A 577 Choline dehydrogenase and related flavoproteins; g 98.31
2bcg_G453 Secretory pathway GDP dissociation inhibitor; RABG 98.24
1o94_A729 Tmadh, trimethylamine dehydrogenase; electron tran 98.22
2e1m_A376 L-glutamate oxidase; L-amino acid oxidase, FAD, L- 98.21
2xve_A464 Flavin-containing monooxygenase; oxidoreductase; H 98.19
2b9w_A 424 Putative aminooxidase; isomerase, conjugated linol 98.18
3hdq_A397 UDP-galactopyranose mutase; substrate and inhibito 98.16
1rsg_A 516 FMS1 protein; FAD binding motif, oxidoreductase; H 98.16
3gwf_A540 Cyclohexanone monooxygenase; flavoprotein biocatal 98.15
2gv8_A447 Monooxygenase; FMO, FAD, NADPH, cofactor complex, 98.15
2jae_A 489 L-amino acid oxidase; oxidoreductase, dimerisation 98.15
1v0j_A 399 UDP-galactopyranose mutase; flavoprotein, isomeras 98.11
1i8t_A367 UDP-galactopyranose mutase; rossman fold, FAD, con 98.04
1sez_A 504 Protoporphyrinogen oxidase, mitochondrial; FAD-bin 98.0
2iid_A 498 L-amino-acid oxidase; flavoenzyme, FAD binding dom 97.98
1y56_A493 Hypothetical protein PH1363; dehydrogenase, protei 97.93
4dsg_A 484 UDP-galactopyranose mutase; rossmann fold, flavin 97.93
1d5t_A433 Guanine nucleotide dissociation inhibitor; ultra-h 97.93
3pl8_A 623 Pyranose 2-oxidase; substrate complex, H167A mutan 97.92
2bi7_A 384 UDP-galactopyranose mutase; FAD, flavoprotein, iso 97.92
1kdg_A 546 CDH, cellobiose dehydrogenase; GMC oxidoreductase, 97.85
3uox_A545 Otemo; baeyer-villiger monooxygenase, oxidoreducta 97.83
4a5l_A314 Thioredoxin reductase; oxidoreductase, redox metab 97.81
3t37_A 526 Probable dehydrogenase; BET alpha beta fold, ADP b 97.78
2z3y_A 662 Lysine-specific histone demethylase 1; chromatin, 97.69
1ju2_A 536 HydroxynitrIle lyase; flavin, GMC oxidoreductase, 97.64
2xag_A 852 Lysine-specific histone demethylase 1; amine oxida 97.62
3qvp_A 583 Glucose oxidase; oxidoreductase; HET: NAG BMA MAN 97.6
4ap3_A549 Steroid monooxygenase; oxidoreductase, baeyer-vill 97.56
1n4w_A 504 CHOD, cholesterol oxidase; flavoenzyme, steroid me 97.5
4gcm_A312 TRXR, thioredoxin reductase; FAD/NAD-linked reduct 97.5
1coy_A 507 Cholesterol oxidase; oxidoreductase(oxygen recepto 97.46
1gpe_A 587 Protein (glucose oxidase); oxidoreductase(flavopro 97.44
3fim_B 566 ARYL-alcohol oxidase; AAO, lignin degradation, oxi 97.41
2jbv_A 546 Choline oxidase; alcohol oxidation, flavoenyzme ox 97.39
3ayj_A 721 Pro-enzyme of L-phenylalanine oxidase; amino acid 97.3
4fk1_A304 Putative thioredoxin reductase; structural genomic 97.28
1vg0_A 650 RAB proteins geranylgeranyltransferase component A 97.08
1w4x_A542 Phenylacetone monooxygenase; baeyer-villiger, FAD; 97.08
4b63_A501 L-ornithine N5 monooxygenase; oxidoreductase, side 96.62
2g1u_A155 Hypothetical protein TM1088A; structural genomics, 96.3
3fwz_A140 Inner membrane protein YBAL; TRKA-N domain, E.coli 96.25
1lss_A140 TRK system potassium uptake protein TRKA homolog; 96.24
3llv_A141 Exopolyphosphatase-related protein; NAD(P)-binding 95.89
3hyw_A430 Sulfide-quinone reductase; monotopic membrane prot 95.76
3ic5_A118 Putative saccharopine dehydrogenase; structural ge 95.68
1id1_A153 Putative potassium channel protein; RCK domain, E. 95.67
1f0y_A302 HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive 95.56
3vrd_B401 FCCB subunit, flavocytochrome C flavin subunit; su 95.24
2hmt_A144 YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane 95.2
3c85_A183 Putative glutathione-regulated potassium-efflux S 95.13
3l4b_C218 TRKA K+ channel protien TM1088B; potassium channel 94.96
3ado_A319 Lambda-crystallin; L-gulonate 3-dehydrogenase, str 94.88
3dfz_A223 SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase 94.65
1pzg_A331 LDH, lactate dehydrogenase; apicomplexa, APAD, tet 94.32
4e12_A283 Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 94.29
3i83_A320 2-dehydropantoate 2-reductase; structural genomics 94.27
3k96_A356 Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA 94.15
4dio_A405 NAD(P) transhydrogenase subunit alpha PART 1; stru 94.14
1jw9_B249 Molybdopterin biosynthesis MOEB protein; MOEB: mod 94.11
2bcg_G 453 Secretory pathway GDP dissociation inhibitor; RABG 94.07
1ks9_A291 KPA reductase;, 2-dehydropantoate 2-reductase; PAN 94.04
1lld_A319 L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N 94.02
2dpo_A319 L-gulonate 3-dehydrogenase; structural genomics, N 93.91
2raf_A209 Putative dinucleotide-binding oxidoreductase; NP_7 93.9
2y0c_A 478 BCEC, UDP-glucose dehydrogenase; oxidoreductase, c 93.87
2ew2_A316 2-dehydropantoate 2-reductase, putative; alpha-str 93.81
3ghy_A335 Ketopantoate reductase protein; oxidoreductase, NA 93.8
3hn2_A312 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, str 93.79
4g65_A 461 TRK system potassium uptake protein TRKA; structur 93.78
1kyq_A274 Met8P, siroheme biosynthesis protein Met8; homodim 93.76
3g0o_A303 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine 93.71
3vtf_A 444 UDP-glucose 6-dehydrogenase; two discrete alpha/be 93.7
3p2y_A381 Alanine dehydrogenase/pyridine nucleotide transhy; 93.53
3lk7_A 451 UDP-N-acetylmuramoylalanine--D-glutamate ligase; a 93.49
2x5o_A 439 UDP-N-acetylmuramoylalanine--D-glutamate ligase; A 93.49
3pid_A 432 UDP-glucose 6-dehydrogenase; rossmann fold, oxidor 93.4
3tl2_A315 Malate dehydrogenase; center for structural genomi 93.3
3gg2_A 450 Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd 93.29
2qyt_A317 2-dehydropantoate 2-reductase; APC81190, porphyrom 93.26
3l9w_A 413 Glutathione-regulated potassium-efflux system Pro 93.13
2v6b_A304 L-LDH, L-lactate dehydrogenase; oxidoreductase, ra 93.12
3l6d_A306 Putative oxidoreductase; structural genomics, prot 93.1
3doj_A310 AT3G25530, dehydrogenase-like protein; gamma-hydro 93.05
1y6j_A318 L-lactate dehydrogenase; southeast collaboratory f 93.04
3k6j_A 460 Protein F01G10.3, confirmed by transcript evidenc; 93.02
1x13_A401 NAD(P) transhydrogenase subunit alpha; NAD(H)-bind 92.94
1d5t_A 433 Guanine nucleotide dissociation inhibitor; ultra-h 92.92
1l7d_A384 Nicotinamide nucleotide transhydrogenase, subunit 92.91
1bg6_A359 N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L 92.91
3g17_A294 Similar to 2-dehydropantoate 2-reductase; structur 92.91
2ewd_A317 Lactate dehydrogenase,; protein-substrate_cofactor 92.85
2hjr_A328 Malate dehydrogenase; malaria, structural genomics 92.84
3g79_A 478 NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; 92.84
3pqe_A326 L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas 92.76
3mog_A 483 Probable 3-hydroxybutyryl-COA dehydrogenase; struc 92.76
3oj0_A144 Glutr, glutamyl-tRNA reductase; structural genomic 92.71
3hwr_A318 2-dehydropantoate 2-reductase; YP_299159.1, PANE/A 92.7
1zcj_A 463 Peroxisomal bifunctional enzyme; peroxisomal multi 92.66
4a7p_A 446 UDP-glucose dehydrogenase; oxidoreductase, carbohy 92.64
1zej_A293 HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural 92.61
1z82_A335 Glycerol-3-phosphate dehydrogenase; TM0378, struct 92.57
1pjc_A361 Protein (L-alanine dehydrogenase); oxidoreductase, 92.57
1mv8_A 436 GMD, GDP-mannose 6-dehydrogenase; rossman fold, do 92.52
3eag_A326 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME 92.51
3pef_A287 6-phosphogluconate dehydrogenase, NAD-binding; gam 92.49
3h8v_A292 Ubiquitin-like modifier-activating enzyme 5; rossm 92.43
3ego_A307 Probable 2-dehydropantoate 2-reductase; structural 92.33
2uyy_A316 N-PAC protein; long-chain dehydrogenase, cytokine; 92.31
1txg_A335 Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid 92.28
3dtt_A245 NADP oxidoreductase; structural genomics, joint ce 92.2
1guz_A310 Malate dehydrogenase; oxidoreductase, tricarboxyli 92.2
1t2d_A322 LDH-P, L-lactate dehydrogenase; ternary complex, o 92.17
3ggo_A314 Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b 92.14
4dll_A320 2-hydroxy-3-oxopropionate reductase; structural ge 92.13
2vns_A215 Metalloreductase steap3; metal-binding, transmembr 92.07
3dfu_A232 Uncharacterized protein from 6-phosphogluconate de 92.06
2a9f_A398 Putative malic enzyme ((S)-malate:NAD+ oxidoreduct 92.03
3rui_A340 Ubiquitin-like modifier-activating enzyme ATG7; au 92.03
1nyt_A271 Shikimate 5-dehydrogenase; alpha/beta domains, WID 91.96
2eez_A369 Alanine dehydrogenase; TTHA0216, structural genomi 91.87
1zud_1251 Adenylyltransferase THIF; thiamin, thiazole, prote 91.74
3qha_A296 Putative oxidoreductase; seattle structural genomi 91.71
4ffl_A363 PYLC; amino acid, biosynthesis of pyrrolysine, iso 91.68
1a5z_A319 L-lactate dehydrogenase; oxidoreductase, glycolysi 91.65
2f1k_A279 Prephenate dehydrogenase; tyrosine synthesis, X-RA 91.64
3gvi_A324 Malate dehydrogenase; NAD, oxidoreductase, tricarb 91.56
3ktd_A341 Prephenate dehydrogenase; structural genomics, joi 91.56
4huj_A220 Uncharacterized protein; PSI-biology, nysgrc, stru 91.56
3phh_A269 Shikimate dehydrogenase; shikimate pathway, helico 91.53
3qsg_A312 NAD-binding phosphogluconate dehydrogenase-like P; 91.53
2vhw_A377 Alanine dehydrogenase; NAD, secreted, oxidoreducta 91.44
3pdu_A287 3-hydroxyisobutyrate dehydrogenase family protein; 91.42
3c24_A286 Putative oxidoreductase; YP_511008.1, structural g 91.34
2h78_A302 Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 91.27
1dlj_A 402 UDP-glucose dehydrogenase; rossmann fold, ternary 91.27
1oju_A294 MDH, malate dehydrogenase; hyperthermophilic, oxid 91.18
1jay_A212 Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma 91.1
1vl6_A388 Malate oxidoreductase; TM0542, NAD-dependent malic 91.1
2pv7_A298 T-protein [includes: chorismate mutase (EC 5.4.99 91.09
4e21_A358 6-phosphogluconate dehydrogenase (decarboxylating; 91.07
3ond_A488 Adenosylhomocysteinase; plant protein, enzyme-subs 91.06
1ur5_A309 Malate dehydrogenase; oxidoreductase, tricarboxyli 91.05
4gwg_A 484 6-phosphogluconate dehydrogenase, decarboxylating; 90.93
1yqg_A263 Pyrroline-5-carboxylate reductase; structural geno 90.91
1pjq_A 457 CYSG, siroheme synthase; rossman fold, nucleotide 90.89
3p7m_A321 Malate dehydrogenase; putative dehydrogenase, enzy 90.88
2rcy_A262 Pyrroline carboxylate reductase; malaria, structur 90.84
1evy_A366 Glycerol-3-phosphate dehydrogenase; rossmann fold, 90.82
2egg_A297 AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff 90.8
3ldh_A330 Lactate dehydrogenase; oxidoreductase, CHOH donor, 90.75
2aef_A234 Calcium-gated potassium channel MTHK; rossmann fol 90.72
2gf2_A296 Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct 90.67
1hyh_A309 L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2 90.61
1vpd_A299 Tartronate semialdehyde reductase; structural geno 90.51
2g5c_A281 Prephenate dehydrogenase; TYRA, oxidoreductase; HE 90.5
4ezb_A317 Uncharacterized conserved protein; structural geno 90.45
3d1l_A266 Putative NADP oxidoreductase BF3122; structural ge 90.42
3h5n_A353 MCCB protein; ubiquitin-activating enzyme, microci 90.29
3nep_X314 Malate dehydrogenase; halophIle, molecular adpatat 90.22
2zyd_A 480 6-phosphogluconate dehydrogenase, decarboxylating; 90.18
2i6t_A303 Ubiquitin-conjugating enzyme E2-like isoform A; L- 90.1
3d0o_A317 L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly 90.1
1y8q_A346 Ubiquitin-like 1 activating enzyme E1A; SUMO, hete 90.04
2wtb_A 725 MFP2, fatty acid multifunctional protein (ATMFP2); 90.02
4gsl_A615 Ubiquitin-like modifier-activating enzyme ATG7; ub 90.01
3vku_A326 L-LDH, L-lactate dehydrogenase; rossmann fold, NAD 90.0
2pgd_A 482 6-phosphogluconate dehydrogenase; oxidoreductase ( 89.99
1pgj_A 478 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; o 89.95
2p4q_A 497 6-phosphogluconate dehydrogenase, decarboxylating; 89.9
1yj8_A375 Glycerol-3-phosphate dehydrogenase; SGPP, structur 89.89
2cvz_A289 Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; 89.88
3vh1_A598 Ubiquitin-like modifier-activating enzyme ATG7; au 89.85
2hk9_A275 Shikimate dehydrogenase; shikimate pathway, drug d 89.78
3cky_A301 2-hydroxymethyl glutarate dehydrogenase; rossmann 89.76
1ldn_A316 L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA 89.76
3c7a_A 404 Octopine dehydrogenase; L) stereospecific opine de 89.75
2izz_A322 Pyrroline-5-carboxylate reductase 1; amino-acid bi 89.75
3don_A277 Shikimate dehydrogenase; alpha-beta structure, ros 89.73
3ojo_A 431 CAP5O; rossmann fold, complex with cofactor NAD an 89.73
3ew7_A221 LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend 89.63
1p77_A272 Shikimate 5-dehydrogenase; NADPH, oxidoreductase; 89.59
3tri_A280 Pyrroline-5-carboxylate reductase; amino acid bios 89.56
4gx0_A565 TRKA domain protein; membrane protein, ION channel 89.54
3ce6_A494 Adenosylhomocysteinase; protein-substrate complex, 89.54
3d4o_A293 Dipicolinate synthase subunit A; NP_243269.1, stru 89.54
3jyo_A283 Quinate/shikimate dehydrogenase; enzyme-cofactor c 89.51
2ahr_A259 Putative pyrroline carboxylate reductase; pyrrolin 89.51
1i36_A264 Conserved hypothetical protein MTH1747; NADP bindi 89.5
1x0v_A354 GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase 89.47
2o3j_A 481 UDP-glucose 6-dehydrogenase; structural genomics, 89.47
2rir_A300 Dipicolinate synthase, A chain; structural genomic 89.44
3gpi_A286 NAD-dependent epimerase/dehydratase; structural ge 89.44
3u62_A253 Shikimate dehydrogenase; shikimate pathway, oxidor 89.43
3h2s_A224 Putative NADH-flavin reductase; Q03B84, NESG, LCR1 89.42
1np3_A338 Ketol-acid reductoisomerase; A DEEP figure-OF-eigh 89.42
3gvp_A435 Adenosylhomocysteinase 3; protein CO-factor comple 89.17
4aj2_A331 L-lactate dehydrogenase A chain; oxidoreductase-in 89.15
2q3e_A 467 UDP-glucose 6-dehydrogenase; hexamer, structural g 89.14
3gt0_A247 Pyrroline-5-carboxylate reductase; structural geno 89.11
2d5c_A263 AROE, shikimate 5-dehydrogenase; substrate, dimer, 89.1
1wdk_A 715 Fatty oxidation complex alpha subunit; alpha2BETA2 89.1
2we8_A386 Xanthine dehydrogenase; oxidoreductase; 2.30A {Myc 89.07
3orq_A377 N5-carboxyaminoimidazole ribonucleotide synthetas; 89.05
3tnl_A315 Shikimate dehydrogenase; structural genomics, cent 88.77
1yb4_A295 Tartronic semialdehyde reductase; structural genom 88.76
1tt5_B 434 Ubiquitin-activating enzyme E1C isoform 1; cell cy 88.74
3e8x_A236 Putative NAD-dependent epimerase/dehydratase; stru 88.69
2iz1_A 474 6-phosphogluconate dehydrogenase, decarboxylating; 88.56
3pwz_A272 Shikimate dehydrogenase 3; alpha-beta, oxidoreduct 88.55
1nvt_A287 Shikimate 5'-dehydrogenase; structural genomics, P 88.54
1gpj_A404 Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro 88.4
3ius_A286 Uncharacterized conserved protein; APC63810, silic 88.3
3fi9_A343 Malate dehydrogenase; structural genomics, oxidore 88.23
1vg0_A650 RAB proteins geranylgeranyltransferase component A 88.22
1leh_A364 Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi 88.16
1b8p_A329 Protein (malate dehydrogenase); oxidoreductase; 1. 88.11
2d4a_B308 Malate dehydrogenase; archaea, hyperthermophIle, o 88.05
2zqz_A326 L-LDH, L-lactate dehydrogenase; oxidoreductase, ro 88.02
1ez4_A318 Lactate dehydrogenase; rossmann fold, oxidoreducta 88.02
1lu9_A287 Methylene tetrahydromethanopterin dehydrogenase; a 87.64
1kjq_A 391 GART 2, phosphoribosylglycinamide formyltransferas 87.62
3q2o_A 389 Phosphoribosylaminoimidazole carboxylase, ATPase; 87.61
1npy_A271 Hypothetical shikimate 5-dehydrogenase-like protei 87.42
3t4e_A312 Quinate/shikimate dehydrogenase; structural genomi 87.41
3fbt_A282 Chorismate mutase and shikimate 5-dehydrogenase fu 87.36
3o8q_A281 Shikimate 5-dehydrogenase I alpha; structural geno 87.36
2x0j_A294 Malate dehydrogenase; oxidoreductase, hyperthermop 87.32
4e4t_A 419 Phosphoribosylaminoimidazole carboxylase, ATPase; 87.16
1hdo_A206 Biliverdin IX beta reductase; foetal metabolism, H 87.07
4b4o_A298 Epimerase family protein SDR39U1; isomerase; HET: 86.85
2dbq_A334 Glyoxylate reductase; D-3-phosphoglycerate dehydro 86.84
3zwc_A 742 Peroxisomal bifunctional enzyme; beta oxidation pa 86.82
3two_A348 Mannitol dehydrogenase; cinnamyl-alcohol dehydroge 86.68
3vps_A321 TUNA, NAD-dependent epimerase/dehydratase; tunicam 86.6
3h9u_A436 Adenosylhomocysteinase; NAD CO-factor complex, str 86.6
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum} Back     alignment and structure
Probab=99.97  E-value=4.5e-29  Score=240.36  Aligned_cols=254  Identities=15%  Similarity=0.155  Sum_probs=182.9

Q ss_pred             CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCC----CCCcCcHHHHHhcCCchhh---hhhcccceEEeCCCCC
Q 017240          106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFT----NNYGVWEDEFRDLGLEGCI---EHVWRDTVVYIDEDEP  178 (375)
Q Consensus       106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~----~~~g~~~~~l~~~g~~~~~---~~~~~~~~~~~~~~~~  178 (375)
                      ++|||+||||||+|+++|+.|+++|++|+|||+.+..+    +..+++...++.+++....   ...+....++.+....
T Consensus         3 e~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~   82 (397)
T 3oz2_A            3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKR   82 (397)
T ss_dssp             EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSS
T ss_pred             CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCce
Confidence            35999999999999999999999999999999876543    2334567778888765432   2222222333332221


Q ss_pred             -ee-----ecCCce-eecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEec-CC--eEEecCEEEEccCCCC
Q 017240          179 -IL-----IGRAYG-RVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACE-HD--MIVPCRLATVASGAAS  247 (375)
Q Consensus       179 -~~-----~~~~~~-~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~-~g--~~i~a~~vI~A~G~~s  247 (375)
                       ..     .....+ .+++..+.+.|.+.+.+.|++++ ++.|+++..+++....+... ++  .+++||+||+|||.+|
T Consensus        83 ~~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S  162 (397)
T 3oz2_A           83 PIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFES  162 (397)
T ss_dssp             CEEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred             EeeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEEeEEEeCCcccc
Confidence             11     112223 68999999999999999999999 99999998877744444332 33  4799999999999998


Q ss_pred             cccccc--------------------------------------------------------------------------
Q 017240          248 GKLLEY--------------------------------------------------------------------------  253 (375)
Q Consensus       248 ~~~~~~--------------------------------------------------------------------------  253 (375)
                      .+....                                                                          
T Consensus       163 ~vr~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~vg~~~~~~~~~~~~~~~~~l  242 (397)
T 3oz2_A          163 EFGRWAGLKSVILARNDIISALQYRMINVDVDPDYTDFYLGSIAPAGYIWVFPKGEGMANVGIGSSINWIHNRFELKNYL  242 (397)
T ss_dssp             HHHHHHTCGGGCCCGGGEEEEEEEEEESCCCCTTEEEEECSTTSTTEEEEEEEEETTEEEEEEEEETTTSCSHHHHHHHH
T ss_pred             HHHHHcCCCcccccceeeeeeEEEEeeccccCcccceeeeeccCCCceEEEeecccceeEEEEeeccchhhhhhhHHHHH
Confidence            653110                                                                          


Q ss_pred             -----------c------CceeeecCC-CCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHHHHhcCCC-c
Q 017240          254 -----------E------EWSYIPVGG-SLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHDHS-R  314 (375)
Q Consensus       254 -----------~------~~~~~p~~~-~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~~l~~~~~-~  314 (375)
                                 .      ....+|... ..+...++++++|||||.++|.+|+|++.|+.+|..+|++|.++++.++. .
T Consensus       243 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~G~Gi~~A~~~g~~~A~~i~~~l~~~~~~~  322 (397)
T 3oz2_A          243 DRFIENHPGLKKGQDIQLVTGGVSVSKVKMPITMPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIESNDYSP  322 (397)
T ss_dssp             HHHHHTCHHHHTSEEEEEEEEEEECCCCCSCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCCSH
T ss_pred             HHHHHhCccccccceeeeeeccccccCcccceeeeeEEEcccccccCCCCcchhHHHHHHHHHHHHHHHHHHHHcCCccH
Confidence                       0      000111111 12345679999999999999999999999999999999999999987652 2


Q ss_pred             cccccccchhHHHHHHHHhhCchhhHHHHHHHHHhHHHHhcCCHHHHHHHHHHhhc
Q 017240          315 GRLTHEQSNENISMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTFFR  370 (375)
Q Consensus       315 ~~L~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~f~~~~~  370 (375)
                      .       ..+.|++.|+..|..+......+++    .+..++++.++++++.+..
T Consensus       323 ~-------~L~~Ye~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~  367 (397)
T 3oz2_A          323 Q-------MMQKYEKLIKERFERKHLRNWVAKE----KLAMLSDDTLDKLVDIVSE  367 (397)
T ss_dssp             H-------HHHHHHHHHHHHHHHHHHHHHHHHH----HHHTCCHHHHHHHHHHHTT
T ss_pred             H-------HHHHHHHHHHHHHHHHHHHHHHHHH----HHHhCCHHHHHHHHHHHhH
Confidence            3       3458999998888777666666555    7788899888888876543
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A* Back     alignment and structure
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A* Back     alignment and structure
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii} Back     alignment and structure
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus} Back     alignment and structure
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus} Back     alignment and structure
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens} Back     alignment and structure
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens} Back     alignment and structure
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces} Back     alignment and structure
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces} Back     alignment and structure
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ... Back     alignment and structure
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae} Back     alignment and structure
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa} Back     alignment and structure
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A* Back     alignment and structure
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A* Back     alignment and structure
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A* Back     alignment and structure
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A* Back     alignment and structure
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A* Back     alignment and structure
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A* Back     alignment and structure
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2 Back     alignment and structure
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A* Back     alignment and structure
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A* Back     alignment and structure
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina} Back     alignment and structure
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A Back     alignment and structure
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A* Back     alignment and structure
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472} Back     alignment and structure
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A* Back     alignment and structure
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C* Back     alignment and structure
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7 Back     alignment and structure
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A* Back     alignment and structure
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp} Back     alignment and structure
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A* Back     alignment and structure
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida} Back     alignment and structure
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia} Back     alignment and structure
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti} Back     alignment and structure
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus} Back     alignment and structure
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens} Back     alignment and structure
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A* Back     alignment and structure
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum} Back     alignment and structure
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A* Back     alignment and structure
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis} Back     alignment and structure
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1 Back     alignment and structure
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 Back     alignment and structure
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii} Back     alignment and structure
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus} Back     alignment and structure
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A* Back     alignment and structure
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A Back     alignment and structure
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A* Back     alignment and structure
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A* Back     alignment and structure
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A* Back     alignment and structure
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus} Back     alignment and structure
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A* Back     alignment and structure
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A* Back     alignment and structure
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli} Back     alignment and structure
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B* Back     alignment and structure
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A* Back     alignment and structure
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans} Back     alignment and structure
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1 Back     alignment and structure
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa} Back     alignment and structure
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6 Back     alignment and structure
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A* Back     alignment and structure
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A* Back     alignment and structure
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A* Back     alignment and structure
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A* Back     alignment and structure
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A* Back     alignment and structure
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A* Back     alignment and structure
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A* Back     alignment and structure
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A* Back     alignment and structure
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A* Back     alignment and structure
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A* Back     alignment and structure
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A* Back     alignment and structure
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 Back     alignment and structure
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum} Back     alignment and structure
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum} Back     alignment and structure
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A* Back     alignment and structure
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A Back     alignment and structure
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV} Back     alignment and structure
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis} Back     alignment and structure
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A* Back     alignment and structure
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A* Back     alignment and structure
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A* Back     alignment and structure
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A* Back     alignment and structure
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A* Back     alignment and structure
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A* Back     alignment and structure
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1} Back     alignment and structure
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense} Back     alignment and structure
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A* Back     alignment and structure
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A* Back     alignment and structure
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A* Back     alignment and structure
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A* Back     alignment and structure
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans} Back     alignment and structure
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A* Back     alignment and structure
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni} Back     alignment and structure
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Back     alignment and structure
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae} Back     alignment and structure
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A* Back     alignment and structure
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A* Back     alignment and structure
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A* Back     alignment and structure
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A* Back     alignment and structure
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris} Back     alignment and structure
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A* Back     alignment and structure
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans} Back     alignment and structure
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris} Back     alignment and structure
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae} Back     alignment and structure
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum} Back     alignment and structure
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A* Back     alignment and structure
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A* Back     alignment and structure
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A* Back     alignment and structure
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Back     alignment and structure
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A* Back     alignment and structure
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti} Back     alignment and structure
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A* Back     alignment and structure
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1 Back     alignment and structure
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A* Back     alignment and structure
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A* Back     alignment and structure
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A* Back     alignment and structure
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ... Back     alignment and structure
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A* Back     alignment and structure
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A* Back     alignment and structure
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti} Back     alignment and structure
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis} Back     alignment and structure
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A* Back     alignment and structure
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi} Back     alignment and structure
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus} Back     alignment and structure
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A* Back     alignment and structure
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Back     alignment and structure
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A* Back     alignment and structure
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti} Back     alignment and structure
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ... Back     alignment and structure
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Back     alignment and structure
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A* Back     alignment and structure
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae} Back     alignment and structure
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A* Back     alignment and structure
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis} Back     alignment and structure
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A* Back     alignment and structure
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum} Back     alignment and structure
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A* Back     alignment and structure
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A* Back     alignment and structure
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A* Back     alignment and structure
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii} Back     alignment and structure
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A* Back     alignment and structure
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A* Back     alignment and structure
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea} Back     alignment and structure
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A* Back     alignment and structure
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A* Back     alignment and structure
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum} Back     alignment and structure
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi} Back     alignment and structure
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A* Back     alignment and structure
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Back     alignment and structure
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A* Back     alignment and structure
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A* Back     alignment and structure
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A* Back     alignment and structure
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A* Back     alignment and structure
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A* Back     alignment and structure
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A* Back     alignment and structure
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis} Back     alignment and structure
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A* Back     alignment and structure
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens} Back     alignment and structure
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Back     alignment and structure
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii} Back     alignment and structure
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 Back     alignment and structure
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei} Back     alignment and structure
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A* Back     alignment and structure
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A* Back     alignment and structure
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum} Back     alignment and structure
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum} Back     alignment and structure
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti} Back     alignment and structure
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis} Back     alignment and structure
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A* Back     alignment and structure
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae} Back     alignment and structure
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A* Back     alignment and structure
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A* Back     alignment and structure
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus} Back     alignment and structure
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea} Back     alignment and structure
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis} Back     alignment and structure
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Back     alignment and structure
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus} Back     alignment and structure
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ... Back     alignment and structure
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A* Back     alignment and structure
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A* Back     alignment and structure
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni} Back     alignment and structure
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A* Back     alignment and structure
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas} Back     alignment and structure
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A* Back     alignment and structure
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii} Back     alignment and structure
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A* Back     alignment and structure
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans} Back     alignment and structure
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A* Back     alignment and structure
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A* Back     alignment and structure
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A* Back     alignment and structure
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A* Back     alignment and structure
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Back     alignment and structure
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Back     alignment and structure
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A* Back     alignment and structure
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A* Back     alignment and structure
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae} Back     alignment and structure
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans} Back     alignment and structure
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1 Back     alignment and structure
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A* Back     alignment and structure
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A* Back     alignment and structure
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A* Back     alignment and structure
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens} Back     alignment and structure
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus} Back     alignment and structure
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A* Back     alignment and structure
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A* Back     alignment and structure
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Back     alignment and structure
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A* Back     alignment and structure
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A* Back     alignment and structure
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A* Back     alignment and structure
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A* Back     alignment and structure
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A* Back     alignment and structure
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus} Back     alignment and structure
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A* Back     alignment and structure
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A* Back     alignment and structure
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A* Back     alignment and structure
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A* Back     alignment and structure
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis} Back     alignment and structure
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A* Back     alignment and structure
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A* Back     alignment and structure
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A* Back     alignment and structure
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris} Back     alignment and structure
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A Back     alignment and structure
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens} Back     alignment and structure
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A* Back     alignment and structure
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A* Back     alignment and structure
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A* Back     alignment and structure
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A* Back     alignment and structure
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis} Back     alignment and structure
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A* Back     alignment and structure
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris} Back     alignment and structure
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A* Back     alignment and structure
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G* Back     alignment and structure
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum} Back     alignment and structure
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A* Back     alignment and structure
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii} Back     alignment and structure
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex} Back     alignment and structure
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum} Back     alignment and structure
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ... Back     alignment and structure
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A* Back     alignment and structure
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 Back     alignment and structure
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A* Back     alignment and structure
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A* Back     alignment and structure
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense} Back     alignment and structure
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A* Back     alignment and structure
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A* Back     alignment and structure
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A* Back     alignment and structure
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A* Back     alignment and structure
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7} Back     alignment and structure
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A* Back     alignment and structure
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A* Back     alignment and structure
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A* Back     alignment and structure
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia} Back     alignment and structure
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A* Back     alignment and structure
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A* Back     alignment and structure
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A* Back     alignment and structure
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex} Back     alignment and structure
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A* Back     alignment and structure
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A* Back     alignment and structure
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 Back     alignment and structure
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae} Back     alignment and structure
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G* Back     alignment and structure
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A* Back     alignment and structure
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP} Back     alignment and structure
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A* Back     alignment and structure
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A* Back     alignment and structure
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A* Back     alignment and structure
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A* Back     alignment and structure
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A* Back     alignment and structure
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A* Back     alignment and structure
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A* Back     alignment and structure
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis} Back     alignment and structure
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7 Back     alignment and structure
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5 Back     alignment and structure
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A* Back     alignment and structure
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii} Back     alignment and structure
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A* Back     alignment and structure
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A Back     alignment and structure
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ... Back     alignment and structure
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A* Back     alignment and structure
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A* Back     alignment and structure
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A* Back     alignment and structure
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A* Back     alignment and structure
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti} Back     alignment and structure
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A Back     alignment and structure
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A* Back     alignment and structure
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A Back     alignment and structure
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A* Back     alignment and structure
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A* Back     alignment and structure
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A* Back     alignment and structure
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp} Back     alignment and structure
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A* Back     alignment and structure
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1 Back     alignment and structure
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii} Back     alignment and structure
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A* Back     alignment and structure
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A* Back     alignment and structure
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C* Back     alignment and structure
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R* Back     alignment and structure
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A* Back     alignment and structure
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A* Back     alignment and structure
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* Back     alignment and structure
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} Back     alignment and structure
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 Back     alignment and structure
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} Back     alignment and structure
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A* Back     alignment and structure
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} Back     alignment and structure
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 Back     alignment and structure
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A* Back     alignment and structure
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A* Back     alignment and structure
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* Back     alignment and structure
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} Back     alignment and structure
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} Back     alignment and structure
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A* Back     alignment and structure
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium} Back     alignment and structure
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* Back     alignment and structure
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* Back     alignment and structure
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus} Back     alignment and structure
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii} Back     alignment and structure
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} Back     alignment and structure
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* Back     alignment and structure
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G* Back     alignment and structure
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A* Back     alignment and structure
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T* Back     alignment and structure
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1} Back     alignment and structure
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A* Back     alignment and structure
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} Back     alignment and structure
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum} Back     alignment and structure
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens} Back     alignment and structure
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} Back     alignment and structure
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1 Back     alignment and structure
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} Back     alignment and structure
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum} Back     alignment and structure
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} Back     alignment and structure
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae} Back     alignment and structure
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A* Back     alignment and structure
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A* Back     alignment and structure
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} Back     alignment and structure
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} Back     alignment and structure
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis} Back     alignment and structure
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* Back     alignment and structure
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} Back     alignment and structure
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} Back     alignment and structure
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} Back     alignment and structure
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 Back     alignment and structure
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans} Back     alignment and structure
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* Back     alignment and structure
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A Back     alignment and structure
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* Back     alignment and structure
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 Back     alignment and structure
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Back     alignment and structure
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A Back     alignment and structure
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum} Back     alignment and structure
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1} Back     alignment and structure
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* Back     alignment and structure
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli} Back     alignment and structure
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} Back     alignment and structure
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha} Back     alignment and structure
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus} Back     alignment and structure
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea} Back     alignment and structure
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus} Back     alignment and structure
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima} Back     alignment and structure
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A Back     alignment and structure
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A* Back     alignment and structure
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58} Back     alignment and structure
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} Back     alignment and structure
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* Back     alignment and structure
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis} Back     alignment and structure
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens} Back     alignment and structure
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6 Back     alignment and structure
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} Back     alignment and structure
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* Back     alignment and structure
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* Back     alignment and structure
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* Back     alignment and structure
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} Back     alignment and structure
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* Back     alignment and structure
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum} Back     alignment and structure
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes} Back     alignment and structure
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* Back     alignment and structure
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 Back     alignment and structure
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} Back     alignment and structure
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A Back     alignment and structure
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} Back     alignment and structure
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A* Back     alignment and structure
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 Back     alignment and structure
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6 Back     alignment and structure
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* Back     alignment and structure
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032} Back     alignment and structure
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti} Back     alignment and structure
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* Back     alignment and structure
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp} Back     alignment and structure
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* Back     alignment and structure
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} Back     alignment and structure
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} Back     alignment and structure
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A* Back     alignment and structure
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* Back     alignment and structure
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* Back     alignment and structure
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A* Back     alignment and structure
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 Back     alignment and structure
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} Back     alignment and structure
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* Back     alignment and structure
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* Back     alignment and structure
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A Back     alignment and structure
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A* Back     alignment and structure
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A* Back     alignment and structure
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} Back     alignment and structure
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum} Back     alignment and structure
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A* Back     alignment and structure
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} Back     alignment and structure
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 Back     alignment and structure
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A Back     alignment and structure
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A* Back     alignment and structure
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1 Back     alignment and structure
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 Back     alignment and structure
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6 Back     alignment and structure
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti} Back     alignment and structure
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} Back     alignment and structure
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A Back     alignment and structure
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} Back     alignment and structure
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A* Back     alignment and structure
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A Back     alignment and structure
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* Back     alignment and structure
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A* Back     alignment and structure
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana} Back     alignment and structure
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A Back     alignment and structure
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* Back     alignment and structure
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A* Back     alignment and structure
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6 Back     alignment and structure
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae} Back     alignment and structure
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum} Back     alignment and structure
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A* Back     alignment and structure
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A Back     alignment and structure
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A Back     alignment and structure
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri} Back     alignment and structure
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* Back     alignment and structure
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B* Back     alignment and structure
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A* Back     alignment and structure
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* Back     alignment and structure
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A* Back     alignment and structure
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Back     alignment and structure
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* Back     alignment and structure
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} Back     alignment and structure
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A* Back     alignment and structure
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A* Back     alignment and structure
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} Back     alignment and structure
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A Back     alignment and structure
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A Back     alignment and structure
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6 Back     alignment and structure
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A* Back     alignment and structure
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans} Back     alignment and structure
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} Back     alignment and structure
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Back     alignment and structure
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} Back     alignment and structure
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Back     alignment and structure
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6 Back     alignment and structure
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A* Back     alignment and structure
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... Back     alignment and structure
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A Back     alignment and structure
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579} Back     alignment and structure
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A* Back     alignment and structure
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A* Back     alignment and structure
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A Back     alignment and structure
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A Back     alignment and structure
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* Back     alignment and structure
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium} Back     alignment and structure
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B* Back     alignment and structure
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Back     alignment and structure
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A* Back     alignment and structure
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} Back     alignment and structure
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 Back     alignment and structure
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 Back     alignment and structure
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Back     alignment and structure
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} Back     alignment and structure
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R* Back     alignment and structure
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1 Back     alignment and structure
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A Back     alignment and structure
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix} Back     alignment and structure
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* Back     alignment and structure
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 Back     alignment and structure
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Back     alignment and structure
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A* Back     alignment and structure
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A* Back     alignment and structure
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 Back     alignment and structure
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* Back     alignment and structure
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} Back     alignment and structure
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* Back     alignment and structure
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A* Back     alignment and structure
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A Back     alignment and structure
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Back     alignment and structure
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} Back     alignment and structure
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A* Back     alignment and structure
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A* Back     alignment and structure
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Back     alignment and structure
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Back     alignment and structure
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 375
d1k0ia1292 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydr 3e-07
d1onfa1259 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase 9e-07
d1lvla1220 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehyd 3e-06
d1h6va1235 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin 3e-06
d2i0za1251 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {B 4e-06
d1gesa1217 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase 4e-06
d3lada1229 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehyd 5e-06
d3grsa1221 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase 5e-06
d1ojta1229 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide deh 6e-06
d1v59a1233 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehyd 6e-06
d1ebda1223 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehyd 7e-06
d1dxla1221 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehyd 9e-06
d2gqfa1253 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein H 3e-05
d1fl2a1184 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide 4e-05
d1mo9a1261 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketop 5e-05
d1d5ta1336 c.3.1.3 (A:-2-291,A:389-431) Guanine nucleotide di 7e-05
d1aoga1238 c.3.1.5 (A:3-169,A:287-357) Trypanothione reductas 8e-05
d2voua1265 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydr 1e-04
d1feca1240 c.3.1.5 (A:1-169,A:287-357) Trypanothione reductas 1e-04
d3c96a1288 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Ps 2e-04
d1y0pa2308 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 ( 2e-04
d1d4ca2322 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 ( 2e-04
d1qo8a2317 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 ( 3e-04
d2cula1230 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {T 3e-04
d1rp0a1278 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi 3e-04
d1neka2330 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase 3e-04
d2bs2a2336 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wo 4e-04
d2bcgg1297 c.3.1.3 (G:5-301) Guanine nucleotide dissociation 6e-04
d1i8ta1298 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mu 0.001
d1ryia1276 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO { 0.001
d2gf3a1281 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bac 0.002
d2gjca1311 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Th 0.002
d1xdia1233 c.3.1.5 (A:2-161,A:276-348) Dihydrolipoamide dehyd 0.002
d2ivda1347 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen ox 0.003
d2gmha1380 c.3.1.2 (A:4-236,A:336-482) Electron transfer flav 0.004
>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} Length = 292 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 49.2 bits (116), Expect = 3e-07
 Identities = 33/272 (12%), Positives = 65/272 (23%), Gaps = 47/272 (17%)

Query: 109 DLVVIGCGPAGLALAAESAKLGLNVGLI---GPDLPFTNNYGV--------------WED 151
            + +IG GP+GL L     K G++  ++    PD                        + 
Sbjct: 4   QVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDR 63

Query: 152 EFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGRVSRHLLHEELLRRCVESG--VSYL 209
                GL      +         + + +  G+      +  +  +L+      G    Y 
Sbjct: 64  RMARDGLVHEGVEIAFAGQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQ 123

Query: 210 SSKVESITESTSGHRLVACEHD--MIVPCRLATVASGAASGKLLEYEEWSYIPVGGSLPN 267
           +++V           +        + + C       G                       
Sbjct: 124 AAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDGFHGISRQSIPAERMQH------- 176

Query: 268 TEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHDHSRG-------RLTHE 320
              R    G AA +V P     +  + S+       +    +              L   
Sbjct: 177 --GRLFLAGDAAHIVPPTGAKGLNLAASDVSTLYRLLLKAYREGRGELLERYSAICLRRI 234

Query: 321 QSNENISMQAWNTLW--------PQERKRQRA 344
              E  S   W T             ++ Q+ 
Sbjct: 235 WKAERFSW--WMTSVLHRFPDTDAFSQRIQQT 264
>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} Length = 259 Back     information, alignment and structure
>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 220 Back     information, alignment and structure
>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 235 Back     information, alignment and structure
>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} Length = 251 Back     information, alignment and structure
>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]} Length = 217 Back     information, alignment and structure
>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} Length = 229 Back     information, alignment and structure
>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 221 Back     information, alignment and structure
>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} Length = 229 Back     information, alignment and structure
>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 233 Back     information, alignment and structure
>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 223 Back     information, alignment and structure
>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} Length = 221 Back     information, alignment and structure
>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} Length = 253 Back     information, alignment and structure
>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]} Length = 184 Back     information, alignment and structure
>d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} Length = 261 Back     information, alignment and structure
>d1d5ta1 c.3.1.3 (A:-2-291,A:389-431) Guanine nucleotide dissociation inhibitor, GDI {Cow (Bos taurus) [TaxId: 9913]} Length = 336 Back     information, alignment and structure
>d1aoga1 c.3.1.5 (A:3-169,A:287-357) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} Length = 238 Back     information, alignment and structure
>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} Length = 265 Back     information, alignment and structure
>d1feca1 c.3.1.5 (A:1-169,A:287-357) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} Length = 240 Back     information, alignment and structure
>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} Length = 288 Back     information, alignment and structure
>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} Length = 308 Back     information, alignment and structure
>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]} Length = 322 Back     information, alignment and structure
>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} Length = 317 Back     information, alignment and structure
>d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus thermophilus [TaxId: 274]} Length = 230 Back     information, alignment and structure
>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]} Length = 278 Back     information, alignment and structure
>d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase {Escherichia coli [TaxId: 562]} Length = 330 Back     information, alignment and structure
>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]} Length = 336 Back     information, alignment and structure
>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 297 Back     information, alignment and structure
>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 298 Back     information, alignment and structure
>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} Length = 276 Back     information, alignment and structure
>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} Length = 281 Back     information, alignment and structure
>d2gjca1 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Thi4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 311 Back     information, alignment and structure
>d1xdia1 c.3.1.5 (A:2-161,A:276-348) Dihydrolipoamide dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 233 Back     information, alignment and structure
>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} Length = 347 Back     information, alignment and structure
>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]} Length = 380 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query375
d2gmha1380 Electron transfer flavoprotein-ubiquinone oxidored 99.83
d3c96a1288 Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 99.81
d1k0ia1292 p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a 99.81
d2i0za1251 Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] 99.78
d1pn0a1360 Phenol hydroxylase {Soil-living yeast (Trichosporo 99.78
d2voua1265 Dihydroxypyridine hydroxylase DhpH {Arthrobacter n 99.74
d2gqfa1253 Hypothetical protein HI0933 {Haemophilus influenza 99.73
d2gf3a1281 Sarcosine oxidase {Bacillus sp., strain b0618 [Tax 99.68
d1ryia1276 Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} 99.65
d1d4ca2322 Flavocytochrome c3 (respiratory fumarate reductase 99.6
d1y0pa2308 Flavocytochrome c3 (respiratory fumarate reductase 99.59
d1qo8a2317 Flavocytochrome c3 (respiratory fumarate reductase 99.57
d1pj5a2305 N,N-dimethylglycine oxidase {Arthrobacter globifor 99.56
d1w4xa1298 Phenylacetone monooxygenase {Thermobifida fusca [T 99.54
d2bs2a2336 Fumarate reductase {Wolinella succinogenes [TaxId: 99.54
d1dxla1221 Dihydrolipoamide dehydrogenase {Garden pea (Pisum 99.54
d1vdca1192 Thioredoxin reductase {Mouse-ear cress (Arabidopsi 99.53
d1gesa2116 Glutathione reductase {Escherichia coli [TaxId: 56 99.51
d1neka2330 Succinate dehydogenase {Escherichia coli [TaxId: 5 99.51
d2cula1230 GidA-related protein TTHA1897 {Thermus thermophilu 99.48
d3lada1229 Dihydrolipoamide dehydrogenase {Azotobacter vinela 99.48
d1ebda1223 Dihydrolipoamide dehydrogenase {Bacillus stearothe 99.47
d1trba1190 Thioredoxin reductase {Escherichia coli [TaxId: 56 99.45
d1gesa1217 Glutathione reductase {Escherichia coli [TaxId: 56 99.45
d1kf6a2311 Fumarate reductase {Escherichia coli [TaxId: 562]} 99.45
d2gv8a1335 Flavin-dependent monoxygenase SPBP16F5.08c {Schizo 99.44
d1ps9a3179 2,4-dienoyl-CoA reductase, middle domain {Escheric 99.43
d1d5ta1336 Guanine nucleotide dissociation inhibitor, GDI {Co 99.43
d1h6va1235 Mammalian thioredoxin reductase {Rat (Rattus norve 99.41
d1fl2a1184 Alkyl hydroperoxide reductase subunit F (AhpF), C- 99.41
d2ivda1347 Protoporphyrinogen oxidase {Myxococcus xanthus [Ta 99.4
d1feca2117 Trypanothione reductase {Crithidia fasciculata [Ta 99.39
d1q1ra2133 Putidaredoxin reductase {Pseudomonas putida [TaxId 99.39
d3lada2119 Dihydrolipoamide dehydrogenase {Azotobacter vinela 99.38
d1lvla1220 Dihydrolipoamide dehydrogenase {Pseudomonas putida 99.37
d2iida1370 L-aminoacid oxidase {Malayan pit viper (Calloselas 99.37
d1b5qa1347 Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} 99.36
d1onfa2117 Glutathione reductase {Plasmodium falciparum [TaxI 99.36
d1d7ya2121 NADH-dependent ferredoxin reductase, BphA4 {Pseudo 99.36
d1m6ia1213 Apoptosis-inducing factor (AIF) {Human (Homo sapie 99.35
d1mo9a1261 NADH-dependent 2-ketopropyl coenzyme M oxidoreduct 99.34
d2bcgg1297 Guanine nucleotide dissociation inhibitor, GDI {Ba 99.34
d1xhca1167 NADH oxidase /nitrite reductase {Pyrococcus furios 99.33
d2v5za1383 Monoamine oxidase B {Human (Homo sapiens) [TaxId: 99.32
d1m6ia2137 Apoptosis-inducing factor (AIF) {Human (Homo sapie 99.32
d1v59a1233 Dihydrolipoamide dehydrogenase {Baker's yeast (Sac 99.32
d3grsa1221 Glutathione reductase {Human (Homo sapiens) [TaxId 99.31
d1lvla2115 Dihydrolipoamide dehydrogenase {Pseudomonas putida 99.31
d1aoga2117 Trypanothione reductase {Trypanosoma cruzi [TaxId: 99.3
d1xdia1233 Dihydrolipoamide dehydrogenase {Mycobacterium tube 99.29
d1ebda2117 Dihydrolipoamide dehydrogenase {Bacillus stearothe 99.28
d1c0pa1268 D-aminoacid oxidase, N-terminal domain {Rhodotorul 99.28
d1d7ya1183 NADH-dependent ferredoxin reductase, BphA4 {Pseudo 99.27
d1v59a2122 Dihydrolipoamide dehydrogenase {Baker's yeast (Sac 99.27
d1nhpa1198 NADH peroxidase {Enterococcus faecalis [TaxId: 135 99.26
d1mo9a2121 NADH-dependent 2-ketopropyl coenzyme M oxidoreduct 99.26
d1fcda1186 Flavocytochrome c sulfide dehydrogenase, FCSD, fla 99.26
d1ojta1229 Dihydrolipoamide dehydrogenase {Neisseria meningit 99.25
d1ojta2125 Dihydrolipoamide dehydrogenase {Neisseria meningit 99.24
d3grsa2125 Glutathione reductase {Human (Homo sapiens) [TaxId 99.23
d1nhpa2123 NADH peroxidase {Enterococcus faecalis [TaxId: 135 99.21
d1seza1373 Protoporphyrinogen oxidase {Tobacco (Nicotiana tab 99.21
d1xhca2122 NADH oxidase /nitrite reductase {Pyrococcus furios 99.2
d1chua2305 L-aspartate oxidase {Escherichia coli [TaxId: 562] 99.19
d1dxla2123 Dihydrolipoamide dehydrogenase {Garden pea (Pisum 99.17
d1rp0a1278 Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara 99.15
d1onfa1259 Glutathione reductase {Plasmodium falciparum [TaxI 99.14
d1h6va2122 Mammalian thioredoxin reductase {Rat (Rattus norve 99.13
d1q1ra1185 Putidaredoxin reductase {Pseudomonas putida [TaxId 99.11
d1feca1240 Trypanothione reductase {Crithidia fasciculata [Ta 99.11
d1jnra2356 Adenylylsulfate reductase A subunit {Archaeon Arch 99.1
d2gjca1311 Thiazole biosynthetic enzyme Thi4 {Baker's yeast ( 99.02
d1kifa1246 D-aminoacid oxidase, N-terminal domain {Pig (Sus s 98.96
d1aoga1238 Trypanothione reductase {Trypanosoma cruzi [TaxId: 98.95
d1djqa3233 Trimethylamine dehydrogenase, middle domain {Methy 98.77
d1cjca2230 Adrenodoxin reductase of mitochondrial p450 system 98.73
d1gtea4196 Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su 98.71
d1lqta2239 Ferredoxin:NADP reductase FprA {Mycobacterium tube 98.68
d2dw4a2 449 Lysine-specific histone demethylase 1, LSD1 {Human 98.64
d1i8ta1298 UDP-galactopyranose mutase, N-terminal domain {Esc 98.57
d2f5va1 379 Pyranose 2-oxidase {White-rot fungus (Peniophora s 98.45
d1djqa2156 Trimethylamine dehydrogenase, C-terminal domain {M 98.37
d1ps9a2162 2,4-dienoyl-CoA reductase, C-terminal domain {Esch 98.34
d2bi7a1314 UDP-galactopyranose mutase, N-terminal domain {Kle 98.33
d3coxa1370 Cholesterol oxidase of GMC family {Brevibacterium 98.21
d1kdga1360 Flavoprotein domain of flavocytochrome cellobiose 98.17
d1gtea3153 Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su 98.14
d1n4wa1367 Cholesterol oxidase of GMC family {Streptomyces sp 98.11
d1trba2126 Thioredoxin reductase {Escherichia coli [TaxId: 56 98.1
d1fl2a2126 Alkyl hydroperoxide reductase subunit F (AhpF), C- 98.03
d1gpea1391 Glucose oxidase {Penicillium amagasakiense [TaxId: 98.03
d1cf3a1385 Glucose oxidase {Aspergillus niger [TaxId: 5061]} 97.91
d1ju2a1351 Hydroxynitrile lyase {Almond (Prunus dulcis) [TaxI 97.84
d1vdca2130 Thioredoxin reductase {Mouse-ear cress (Arabidopsi 97.4
d1bg6a2184 N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A 96.95
d2jfga193 UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase 96.79
d1e5qa1182 Saccharopine reductase {Rice blast fungus (Magnapo 96.75
d1ks9a2167 Ketopantoate reductase PanE {Escherichia coli [Tax 96.72
d1lssa_132 Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax 96.65
d2gv8a2107 Flavin-dependent monoxygenase SPBP16F5.08c {Schizo 96.49
d1l7da1183 Nicotinamide nucleotide transhydrogenase dI compon 96.34
d1pjca1168 L-alanine dehydrogenase {Phormidium lapideum [TaxI 96.27
d1f0ya2192 Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum 96.26
d1wdka3186 Fatty oxidation complex alpha subunit, middle doma 96.22
d1mv8a2202 GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos 96.18
d2hmva1134 Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} 96.12
d1vg0a1 491 Rab escort protein 1 {Rat (Rattus norvegicus) [Tax 95.81
d1txga2180 Glycerol-3- phosphate dehydrogenase {Archaeoglobus 95.75
d2f1ka2165 Prephenate dehydrogenase TyrA {Synechocystis sp. p 95.65
d2pv7a2152 Prephenate dehydrogenase TyrA {Haemophilus influen 95.5
d1n1ea2189 Glycerol-3- phosphate dehydrogenase {Trypanosome ( 95.47
d1pjqa1113 Siroheme synthase CysG, domain 1 {Salmonella typhi 95.44
d1kyqa1150 Bifunctional dehydrogenase/ferrochelatase Met8p, N 95.35
d1jaya_212 Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae 94.94
d1pzga1154 Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 94.92
d1e3ja2170 Ketose reductase (sorbitol dehydrogenase) {Silverl 94.85
d1kjqa2111 Glycinamide ribonucleotide transformylase PurT, N- 94.71
d1ez4a1146 Lactate dehydrogenase {Lactobacillus pentosus [Tax 94.67
d1pl8a2171 Ketose reductase (sorbitol dehydrogenase) {Human ( 94.64
d1a9xa3127 Carbamoyl phosphate synthetase (CPS), large subuni 94.62
d1dlja2196 UDP-glucose dehydrogenase (UDPGDH) {Streptococcus 94.4
d2pgda2176 6-phosphogluconate dehydrogenase {Sheep (Ovis orie 94.4
d1llua2166 Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax 94.27
d1a9xa4121 Carbamoyl phosphate synthetase (CPS), large subuni 94.2
d1piwa2168 Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas 94.17
d1nyta1170 Shikimate 5-dehydrogenase AroE {Escherichia coli [ 94.14
d1i0za1160 Lactate dehydrogenase {Human (Homo sapiens), heart 94.12
d1ldna1148 Lactate dehydrogenase {Bacillus stearothermophilus 94.11
d1cjca1225 Adrenodoxin reductase of mitochondrial p450 system 94.02
d1id1a_153 Rck domain from putative potassium channel Kch {Es 93.86
d1guza1142 Malate dehydrogenase {Chlorobium vibrioforme [TaxI 93.8
d1vpda2161 Hydroxyisobutyrate dehydrogenase {Salmonella typhi 93.7
d1pgja2178 6-phosphogluconate dehydrogenase {Trypanosoma bruc 93.69
d1jqba2174 Bacterial secondary alcohol dehydrogenase {Clostri 93.68
d1vj0a2182 Hypothetical protein TM0436 {Thermotoga maritima [ 93.55
d1uxja1142 Malate dehydrogenase {Chloroflexus aurantiacus [Ta 93.44
d3etja278 N5-carboxyaminoimidazole ribonucleotide synthetase 93.2
d1npya1167 Shikimate 5-dehydrogenase-like protein HI0607 {Hae 93.19
d1hyha1146 L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La 93.18
d1y6ja1142 Lactate dehydrogenase {Clostridium thermocellum [T 93.16
d1e3ia2174 Alcohol dehydrogenase {Mouse (Mus musculus), class 93.14
d1jw9b_247 Molybdenum cofactor biosynthesis protein MoeB {Esc 93.12
d1llda1143 Lactate dehydrogenase {Bifidobacterium longum, str 93.08
d1uufa2168 Hypothetical protein YahK {Escherichia coli [TaxId 93.05
d2ldxa1159 Lactate dehydrogenase {Mouse (Mus musculus) [TaxId 93.05
d1rjwa2168 Alcohol dehydrogenase {Bacillus stearothermophilus 93.04
d1ojua1142 Malate dehydrogenase {Archaeon Archaeoglobus fulgi 93.03
d1i36a2152 Conserved hypothetical protein MTH1747 {Archaeon M 92.94
d1d1ta2176 Alcohol dehydrogenase {Human (Homo sapiens), diffe 92.93
d1hyea1145 MJ0490, lactate/malate dehydrogenase {Archaeon Met 92.85
d2g5ca2171 Prephenate dehydrogenase TyrA {Aquifex aeolicus [T 92.83
d3cuma2162 Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru 92.72
d1lqta1216 Ferredoxin:NADP reductase FprA {Mycobacterium tube 92.72
d1a5za1140 Lactate dehydrogenase {Thermotoga maritima [TaxId: 92.68
d1kola2195 Formaldehyde dehydrogenase {Pseudomonas putida [Ta 92.54
d1t2da1150 Lactate dehydrogenase {Malaria parasite (Plasmodiu 92.37
d1djqa3233 Trimethylamine dehydrogenase, middle domain {Methy 92.23
d1mlda1144 Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 91.67
d1f8fa2174 Benzyl alcohol dehydrogenase {Acinetobacter calcoa 91.44
d1p0fa2174 Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 91.03
d2ahra2152 Pyrroline-5-carboxylate reductase ProC {Streptococ 90.16
d1yqga2152 Pyrroline-5-carboxylate reductase ProC {Neisseria 89.93
d1cdoa2175 Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI 89.78
d1vi2a1182 Putative shikimate dehydrogenase YdiB {Escherichia 89.76
d1o6za1142 Malate dehydrogenase {Archaeon Haloarcula marismor 89.72
d2jhfa2176 Alcohol dehydrogenase {Horse (Equus caballus) [Tax 89.37
d1p77a1171 Shikimate 5-dehydrogenase AroE {Haemophilus influe 89.0
d1nvta1177 Shikimate 5-dehydrogenase AroE {Archaeon Methanoco 88.82
d1luaa1191 Methylene-tetrahydromethanopterin dehydrogenase {M 88.78
d1w4xa2235 Phenylacetone monooxygenase {Thermobifida fusca [T 88.74
d1hdoa_205 Biliverdin IX beta reductase {Human (Homo sapiens) 88.46
d1qyda_312 Pinoresinol-lariciresinol reductase {Giant arborvi 88.43
d1qyca_307 Phenylcoumaran benzylic ether reductase {Loblolly 88.13
d1gpja2159 Glutamyl tRNA-reductase middle domain {Archaeon Me 87.97
d1li4a1163 S-adenosylhomocystein hydrolase {Human (Homo sapie 87.44
d2cmda1145 Malate dehydrogenase {Escherichia coli [TaxId: 562 87.37
d1h2ba2172 Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ 87.36
d1yovb1 426 UBA3 {Human (Homo sapiens) [TaxId: 9606]} 87.22
d2dt5a2126 Transcriptional repressor Rex, C-terminal domain { 86.34
d1vl0a_281 DTDP-4-dehydrorhamnose reductase RfbD {Clostridium 86.27
d1p3da196 UDP-N-acetylmuramate-alanine ligase MurC {Haemophi 85.9
d1jvba2170 Alcohol dehydrogenase {Archaeon Sulfolobus solfata 85.68
d2fzwa2176 Alcohol dehydrogenase {Human (Homo sapiens), diffe 85.23
d1fjha_257 3-alpha-hydroxysteroid dehydrogenase {Comamonas te 84.84
d5mdha1154 Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 84.78
d3coxa1370 Cholesterol oxidase of GMC family {Brevibacterium 83.87
d1v8ba1163 S-adenosylhomocystein hydrolase {Plasmodium falcip 82.68
d2fy8a1129 Potassium channel-related protein MthK {Archaeon M 82.01
d1n4wa1367 Cholesterol oxidase of GMC family {Streptomyces sp 81.87
d1qp8a1181 Putative formate dehydrogenase {Archaeon Pyrobacul 81.65
d1yb5a2174 Quinone oxidoreductase {Human (Homo sapiens) [TaxI 81.61
d1c1da1201 Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ 81.48
d1uaya_241 Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t 81.47
d1w6ua_294 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H 81.36
d1h5qa_260 Mannitol dehydrogenase {Mushroom (Agaricus bisporu 81.04
d1vjta1193 Putative alpha-glucosidase TM0752 {Thermotoga mari 80.43
>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.83  E-value=6.8e-20  Score=174.13  Aligned_cols=236  Identities=16%  Similarity=0.116  Sum_probs=149.6

Q ss_pred             CCcccEEEECCCHHHHHHHHHHHH------CCCcEEEECCCCCCCCC---Cc-CcHHHHHhcCCchhh-----hhhc-cc
Q 017240          105 NGILDLVVIGCGPAGLALAAESAK------LGLNVGLIGPDLPFTNN---YG-VWEDEFRDLGLEGCI-----EHVW-RD  168 (375)
Q Consensus       105 ~~~~DVvIIGgG~aGl~aA~~La~------~G~~V~liE~~~~~~~~---~g-~~~~~l~~~g~~~~~-----~~~~-~~  168 (375)
                      ..+||||||||||||++||+.|++      .|++|+||||....+..   -+ +....++++.-....     .... ..
T Consensus        30 ~~e~DViIVGgGPAGlsaA~~LA~l~~~~~~Gl~VlllEK~~~pG~k~~~Ggvl~~~~l~~l~p~~~~~~~~~~~~~~~~  109 (380)
T d2gmha1          30 AEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTED  109 (380)
T ss_dssp             EEECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEE
T ss_pred             cccCCEEEECCCHHHHHHHHHHHhhhhhhcCCCEEEEEcCCCCCCCCccccccccHHHHHHHccchhhhccccccceecc
Confidence            446999999999999999999998      89999999998655422   12 233444443211100     0000 11


Q ss_pred             ceEEeCCCCCe---------eecCCceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceE-EEEecC-------
Q 017240          169 TVVYIDEDEPI---------LIGRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHR-LVACEH-------  230 (375)
Q Consensus       169 ~~~~~~~~~~~---------~~~~~~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~-~V~~~~-------  230 (375)
                      ...+.......         ........+.+..+..++.+.+++.|+++. ...+.++..++++.+ .+.+.+       
T Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ae~~g~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~  189 (380)
T d2gmha1         110 RFGILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDG  189 (380)
T ss_dssp             EEEEECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTS
T ss_pred             eEEEeeccccccccccCchhcccccceeehhhHHHHHHHHHHhhccceeeeecceeeeeeccCCceeecccccccccccc
Confidence            11111111110         011112267788999999999999999999 888888887665422 222211       


Q ss_pred             --------CeEEecCEEEEccCCCCccccccc-----CceeeecCC---CCCccCCCEEEEccCCCCCCCCChHHHHHHH
Q 017240          231 --------DMIVPCRLATVASGAASGKLLEYE-----EWSYIPVGG---SLPNTEQRNLAFGAAASMVHPATGYSVVRSL  294 (375)
Q Consensus       231 --------g~~i~a~~vI~A~G~~s~~~~~~~-----~~~~~p~~~---~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al  294 (375)
                              +....++..+++.|.......++.     .....|..+   ......++++++||+|+.++|.+|.|++.||
T Consensus       190 ~~~~~~~~~~~~~~~~~v~~~G~~G~l~k~li~~~~l~~~~~~~~G~~sip~l~~~G~lLVGDAAG~vnP~~g~GI~~Am  269 (380)
T d2gmha1         190 APKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQGGFQSIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAM  269 (380)
T ss_dssp             CEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTTTTSCCCCGGGGCCCCEETTEEECTTTTCCCBTTTTBCHHHHH
T ss_pred             cccccccccccccccEEEEeeeCCCcchHHHHhhhhhccccccccccccccccccCCeeEEeccccccchhhcCCeeeee
Confidence                    135678999999998764432210     111122111   1134577899999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhcCCC-ccccccccchhHHHHHHHHhhC-chhhHHHH
Q 017240          295 SEAPNYASAIAYILKHDHS-RGRLTHEQSNENISMQAWNTLW-PQERKRQR  343 (375)
Q Consensus       295 ~~a~~~a~~i~~~l~~~~~-~~~L~~~~~~~~~~~~~w~~~~-~~~~~~~~  343 (375)
                      .+|..+|+++.+++..++. ...+.   .-...|...|+..| .++....+
T Consensus       270 ~SG~lAAeai~~al~~~~~~~~~~~---~~~~~y~~~~~~s~~~~eL~~~r  317 (380)
T d2gmha1         270 KSGTLAAESIFNQLTSENLQSKTIG---LHVTEYEDNLKNSWVWKELYSVR  317 (380)
T ss_dssp             HHHHHHHHHHHHHHTCCCCCCSSSS---CCCTHHHHHHHTSHHHHHHHHTT
T ss_pred             ccHHHHHHHHHHHHHcCCcccchhh---hhhhhHHHHHHhhHHHHHHHHhh
Confidence            9999999999999987763 22221   01246666666655 23344333
>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]} Back     information, alignment and structure
>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} Back     information, alignment and structure
>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} Back     information, alignment and structure
>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} Back     information, alignment and structure
>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]} Back     information, alignment and structure
>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} Back     information, alignment and structure
>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} Back     information, alignment and structure
>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} Back     information, alignment and structure
>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]} Back     information, alignment and structure
>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} Back     information, alignment and structure
>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1kf6a2 c.3.1.4 (A:0-225,A:358-442) Fumarate reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} Back     information, alignment and structure
>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} Back     information, alignment and structure
>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} Back     information, alignment and structure
>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} Back     information, alignment and structure
>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} Back     information, alignment and structure
>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} Back     information, alignment and structure
>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} Back     information, alignment and structure
>d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} Back     information, alignment and structure
>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} Back     information, alignment and structure
>d1xdia1 c.3.1.5 (A:2-161,A:276-348) Dihydrolipoamide dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} Back     information, alignment and structure
>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} Back     information, alignment and structure
>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} Back     information, alignment and structure
>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} Back     information, alignment and structure
>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1chua2 c.3.1.4 (A:2-237,A:354-422) L-aspartate oxidase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} Back     information, alignment and structure
>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1feca1 c.3.1.5 (A:1-169,A:287-357) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} Back     information, alignment and structure
>d1jnra2 c.3.1.4 (A:2-256,A:402-502) Adenylylsulfate reductase A subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d2gjca1 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Thi4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1aoga1 c.3.1.5 (A:3-169,A:287-357) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} Back     information, alignment and structure
>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} Back     information, alignment and structure
>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} Back     information, alignment and structure
>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} Back     information, alignment and structure
>d1ps9a2 c.3.1.1 (A:466-627) 2,4-dienoyl-CoA reductase, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]} Back     information, alignment and structure
>d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} Back     information, alignment and structure
>d1trba2 c.3.1.5 (A:119-244) Thioredoxin reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1fl2a2 c.3.1.5 (A:326-451) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium amagasakiense [TaxId: 63559]} Back     information, alignment and structure
>d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus niger [TaxId: 5061]} Back     information, alignment and structure
>d1ju2a1 c.3.1.2 (A:1-293,A:464-521) Hydroxynitrile lyase {Almond (Prunus dulcis) [TaxId: 3755]} Back     information, alignment and structure
>d1vdca2 c.3.1.5 (A:118-243) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} Back     information, alignment and structure
>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Back     information, alignment and structure
>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} Back     information, alignment and structure
>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} Back     information, alignment and structure
>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} Back     information, alignment and structure
>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} Back     information, alignment and structure
>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1vg0a1 c.3.1.3 (A:3-444,A:558-606) Rab escort protein 1 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} Back     information, alignment and structure
>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} Back     information, alignment and structure
>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} Back     information, alignment and structure
>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Back     information, alignment and structure
>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} Back     information, alignment and structure
>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} Back     information, alignment and structure
>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} Back     information, alignment and structure
>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1cjca1 c.3.1.1 (A:107-331) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} Back     information, alignment and structure
>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} Back     information, alignment and structure
>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Back     information, alignment and structure
>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} Back     information, alignment and structure
>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} Back     information, alignment and structure
>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Back     information, alignment and structure
>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} Back     information, alignment and structure
>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure
>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Back     information, alignment and structure
>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1lqta1 c.3.1.1 (A:109-324) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Back     information, alignment and structure
>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} Back     information, alignment and structure
>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Back     information, alignment and structure
>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Back     information, alignment and structure
>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} Back     information, alignment and structure
>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Back     information, alignment and structure
>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Back     information, alignment and structure
>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Back     information, alignment and structure
>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} Back     information, alignment and structure
>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Back     information, alignment and structure
>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Back     information, alignment and structure
>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} Back     information, alignment and structure
>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Back     information, alignment and structure
>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]} Back     information, alignment and structure
>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Back     information, alignment and structure
>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Back     information, alignment and structure
>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Back     information, alignment and structure
>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]} Back     information, alignment and structure
>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} Back     information, alignment and structure
>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} Back     information, alignment and structure
>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} Back     information, alignment and structure
>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Back     information, alignment and structure
>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} Back     information, alignment and structure
>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Back     information, alignment and structure
>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Back     information, alignment and structure