Citrus Sinensis ID: 017260

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370----
Protein Sequence
MKRKVVYQQQQKFNYKWKRKVFAAILLGFCFGSLVLMQCQYTRIMSLRPRFVQKPKIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGTTRSIYFLDRQVNDSIQVDWGGASMIEAERILLRHALADPFNDRFVFLSDSCIPLYNFSYTYNYIMSTSTSFVDSFADTKEGRYNPKMAPVIPVHNWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCKRKSLPEFWREHSFPADPSKEHNCIPDEHYVQTLLAQEGLEGELTRRSLTYSSWDLSSSKDHERRGWHPATYKYADATPLLIQSIKEIDNIYYETEHRREWCSDKGKPSSCFLFARKFTRPAALRLLTMSVLGANSNEAIRESKHAK
Secondary Structure (PSIPRED)
cccccccccccEEEEHHHHHHHHHHHHHHHHHcHHHHHccccHHccccccccccccEEEEEEEccccccHHHHHHHHccccccEEEEEEccccccccccccccccccccEEccccccccccccHHHHHHHHHHHHHccccccEEEEEcccccccccHHHHHHHHHccccccEEccccccccccccccccccccccccccccHHHccHHHHHHHcccccccHHHHHHHccccccHHHHcccccccccccccccccHHHHHHHHHHcccccccccccEEEEccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccHHHHHccccc
Secondary Structure Prediction (SSPRO)
ccccEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEEccccccHHHHHHHHHccccccEEEEEEccccccccccccccccccccccccccEEEcccccHHHHHHHHHHHHHccccccEEEEEEcccccccccHHHHHHHHcccccHHHcccccccccccccccccccHHHHccccEEEEEEHHHHHHHHHcccHHHHHHHHcccccccccccccccccHHccccccccccccccEEEEEccccccccccEEEEEEcccccccccccccccccccccccccHHHHHHHHccccEEEEccccccEcccccccccHEHHHHHccHHHHHHHHHHHHHHcccccccccccccc
Coil and Loop (DISEMBL)
MKRKVVYQQQQKFNYKWKRKVFAAILLGFCFGSLVLMQCQYTrimslrprfvqkpkIAFLFIARNRLPLEMVWDkffkgeesrfsiyvhsrpgflfskgttrSIYFLDRQvndsiqvdwggaSMIEAERILLRHAladpfndrfvflsdsciplynfsytynyimststsfvdsfadtkegrynpkmapvipvhnwrkgsqwAVLTRKHAEIVVndttvfpmfqqhckrkslpefwrehsfpadpskehncipdehYVQTLLAQeglegeltrrsltysswdlssskdherrgwhpatykyadatpLLIQSIKEIDNIYyetehrrewcsdkgkpsscflfaRKFTRPAALRLLTMSVLGANSNEAIRESKHAK
Flexible Loop (DISEMBL)
mkrkvvyqqqqkfnykwkRKVFAAILLGFCFGSLVLMQCQYTRIMSLRPRFVQKPKIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGTTRSIYFLDRQVNDSIQVDWGGASMIEAERILLRHALADPFNDRFVFLSDSCIPLYNFSYTYNYIMSTSTSFVDSFADTKEGRYNPkmapvipvhnwrKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCKRKSLPEFWREHSFPADPSKEHNCIPDEHYVQTLLAQEGLEGELTRRSLTysswdlssskdherrgwhpatykyadatplLIQSIKEIDNIYYETEHrrewcsdkgkpSSCFLFARKFTRPAALRLLTmsvlgansneaireskhak
Low Complexity Region (SEG)
MKRKVVYQQQQKFNYKWKRKVFAAILLGFCFGSLVLMQCQYTRIMSLRPRFVQKPKIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGTTRSIYFLDRQVNDSIQVDWGGASMIEAERILLRHALADPFNDRFVFLSDSCIPLYNFSYTYNYIMSTSTSFVDSFADTKEGRYNPKMAPVIPVHNWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCKRKSLPEFWREHSFPADPSKEHNCIPDEHYVQTLLAQEGLEGELTRRsltysswdlsssKDHERRGWHPATYKYADATPLLIQSIKEIDNIYYETEHRREWCSDKGKPSSCFLFARKFTRPAALRLLTMSVLGANSNEAIRESKHAK
Disordered region (IsUnstruct)
*****VYQQQQKFNYKWKRKVFAAILLGFCFGSLVLMQCQYTRIMSLRPRFVQKPKIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGTTRSIYFLDRQVNDSIQVDWGGASMIEAERILLRHALADPFNDRFVFLSDSCIPLYNFSYTYNYIMSTSTSFVDSFADTKEGRYNPKMAPVIPVHNWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCKRKSLPEFWREH**********NCIPDEHYVQTLLAQEGLEGELTRRSLTYSSW**********RGWHPATYKYADATPLLIQSIKEIDNIYYETEHRREWCSDKGKPSSCFLFARKFTRPAALRLLTMSVLG**************
Disordered Region (DISOPRED)
***********KFNYKWKRKVFAAILLGFCFGSLVLMQCQ****************IAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGTTRSIYFLDRQVNDSIQVDWGGASMIEAERILLRHALADPFNDRFVFLSDSCIPLYNFSYTYNYIMSTSTSFVDSFADTKEGRYNPKMAPVIPVHNWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCKRKSLPEFWREHSFPADPSKEHNCIPDEHYVQTLLAQEGLEGELTRRSLTYSSWDLSSSKDHERRGWHPATYKYADATPLLIQSIKEIDNIYYETEHRREWCSDKGKPSSCFLFARKFTRPAALRLLTMSVLGANSN**********
Disordered Region (DISEMBL)
MKRKVVYQQQQKFNYKWKRKVFAAILLGFCFGSLVLMQCQYTRIMSLRPRFVQKPKIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGTTRSIYFLDRQVNDSIQVDWGGASMIEAERILLRHALADPFNDRFVFLSDSCIPLYNFSYTYNYIMSTSTSFVDSFADTKEGRYNPKMAPVIPVHNWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCKRKSLPEFWREHSFPADPSKEHNCIPDEHYVQTLLAQEGLEGELTRRSLTYSSWD*********RGWHPATYKYADATPLLIQSIKEIDNIYYETEHRREWCSDKGKPSSCFLFARKFTRPAALRLLTMSVLGANSNE*********
Disordered Region (DISPRO)
**RKVVYQQQQKFNYKWKRKVFAAILLGFCFGSLVLMQCQYTRIMSLRPRFVQKPKIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGTTRSIYFLDRQVNDSIQVDWGGASMIEAERILLRHALADPFNDRFVFLSDSCIPLYNFSYTYNYIMSTSTSFVDSFADTKEGRYNPKMAPVIPVHNWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCKRKSLPEFWREHSFPADPSKEHNCIPDEHYVQTLLAQEGLEGELTRRSLTYSSWDLS********GWHPATYKYADATPLLIQSIKEIDNIYYETEHRREWCSDKGKPSSCFLFARKFTRPAALRLLTMSVLGANS***********
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKRKVVYQQQQKFNYKWKRKVFAAILLGFCFGSLVLMQCQYTRIMSLRPRFVQKPKIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGTTRSIYFLDRQVNDSIQVDWGGASMIEAERILLRHALADPFNDRFVFLSDSCIPLYNFSYTYNYIMSTSTSFVDSFADTKEGRYNPKMAPVIPVHNWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCKRKSLPEFWREHSFPADPSKEHNCIPDEHYVQTLLAQEGLEGELTRRSLTYSSWDLSSSKDHERRGWHPATYKYADATPLLIQSIKEIDNIYYETEHRREWCSDKGKPSSCFLFARKFTRPAALRLLTMSVLGANSNEAIRESKHAK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	374
225452380	367	PREDICTED: uncharacterized protein LOC10	0.959	0.978	0.790	1e-172
449450078	366	PREDICTED: uncharacterized protein LOC10	0.957	0.978	0.770	1e-166
356511696	364	PREDICTED: uncharacterized protein LOC10	0.946	0.972	0.747	1e-164
297811585	369	hypothetical protein ARALYDRAFT_909422 [	0.951	0.964	0.744	1e-162
224060092	358	predicted protein [Populus trichocarpa]	0.836	0.874	0.859	1e-162
356573337	365	PREDICTED: uncharacterized protein LOC10	0.949	0.972	0.739	1e-161
42567851	377	Core-2/I-branching beta-1,6-N-acetylgluc	0.951	0.944	0.722	1e-160
51968788	377	putative protein [Arabidopsis thaliana]	0.951	0.944	0.719	1e-159
296087625	324	unnamed protein product [Vitis vinifera]	0.844	0.975	0.823	1e-157
357520047	363	BC10 protein [Medicago truncatula] gi|35	0.906	0.933	0.757	1e-155

>gi|225452380|ref|XP_002275670.1| PREDICTED: uncharacterized protein LOC100259507 [Vitis vinifera]

 Score =  612 bits (1577), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 287/363 (79%), Positives = 322/363 (88%), Gaps = 4/363 (1%)

Query: 8   QQQQKFNYKWKRKVFAAILLGFCFGSLVLMQCQYTRI---MSLRPRFVQKPKIAFLFIAR 64
           +++QK  YKWKR +FA +LLGFCFGSLVL+Q QY+RI    S+   F+Q+PKIAFLFIAR
Sbjct: 2   KRKQKSQYKWKRNLFAMLLLGFCFGSLVLLQTQYSRIRMFASMPSPFLQRPKIAFLFIAR 61

Query: 65  NRLPLEMVWDKFFKGE-ESRFSIYVHSRPGFLFSKGTTRSIYFLDRQVNDSIQVDWGGAS 123
           NRLPL++VWD FF+ E E++FSI+VHSRPGFL +K TTRS+YFL+RQ+NDSIQVDWG AS
Sbjct: 62  NRLPLDVVWDAFFRDEKENKFSIFVHSRPGFLLNKATTRSVYFLNRQLNDSIQVDWGEAS 121

Query: 124 MIEAERILLRHALADPFNDRFVFLSDSCIPLYNFSYTYNYIMSTSTSFVDSFADTKEGRY 183
           MI+AERILLR AL DP N+RFVFLSDSCIPLYNFSY Y+YIMSTSTSFVDSFADTKEGRY
Sbjct: 122 MIQAERILLRSALLDPLNERFVFLSDSCIPLYNFSYIYDYIMSTSTSFVDSFADTKEGRY 181

Query: 184 NPKMAPVIPVHNWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCKRKSLPEFWREHSFPA 243
           NPKM PVIPVHNWRKGSQW VLTRKHA+IVV D TVFPMFQQHCKRKSLPEFWR+H  PA
Sbjct: 182 NPKMDPVIPVHNWRKGSQWVVLTRKHAQIVVEDDTVFPMFQQHCKRKSLPEFWRDHPLPA 241

Query: 244 DPSKEHNCIPDEHYVQTLLAQEGLEGELTRRSLTYSSWDLSSSKDHERRGWHPATYKYAD 303
           D SKEHNCIPDEHYVQTLLAQEG E E+TRRSLT+SSWDLSSSKD ER+GWHP TYK++D
Sbjct: 242 DASKEHNCIPDEHYVQTLLAQEGFEEEITRRSLTHSSWDLSSSKDRERKGWHPLTYKFSD 301

Query: 304 ATPLLIQSIKEIDNIYYETEHRREWCSDKGKPSSCFLFARKFTRPAALRLLTMSVLGANS 363
           ATP+LIQSIK+IDNIYYETE+RREWC+ KGKP+ CFLFARKFTRPAALRLL MS LGA  
Sbjct: 302 ATPMLIQSIKDIDNIYYETEYRREWCTSKGKPAPCFLFARKFTRPAALRLLNMSALGAFH 361

Query: 364 NEA 366
            E 
Sbjct: 362 GET 364

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449450078|ref|XP_004142791.1| PREDICTED: uncharacterized protein LOC101222566 [Cucumis sativus] gi|449483780|ref|XP_004156689.1| PREDICTED: uncharacterized LOC101222566 [Cucumis sativus]

 Score =  591 bits (1524), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 282/366 (77%), Positives = 313/366 (85%), Gaps = 8/366 (2%)

Query: 1   MKRKVVYQQQQKFNYKWKRKVFAAILLGFCFGSLVLMQCQYTRIM-----SLRPRFVQKP 55
           MK+KV    Q+K  +KW+RK+   +L  FCFGSLV+MQ +Y R+M      L P+    P
Sbjct: 1   MKQKVA---QRKALFKWRRKLAFVLLFVFCFGSLVMMQSRYGRVMMLASLHLHPQSAHGP 57

Query: 56  KIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGTTRSIYFLDRQVNDSI 115
           K+AFLFIARNRLPL++VWD FF+  E++FSI+VHSRPGFLF+K TTRS YFL+RQVNDSI
Sbjct: 58  KVAFLFIARNRLPLDIVWDVFFQEGENKFSIFVHSRPGFLFNKATTRSTYFLNRQVNDSI 117

Query: 116 QVDWGGASMIEAERILLRHALADPFNDRFVFLSDSCIPLYNFSYTYNYIMSTSTSFVDSF 175
           QVDWG ASMIEAERILLRHAL D  N RFVFLSDSC+PLYNFSYTY+Y+MSTSTSFVDSF
Sbjct: 118 QVDWGEASMIEAERILLRHALTDSSNQRFVFLSDSCVPLYNFSYTYDYVMSTSTSFVDSF 177

Query: 176 ADTKEGRYNPKMAPVIPVHNWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCKRKSLPEF 235
           ADTKEGRYNPKM PVIPV NWRKGSQW VLTRKHA++VV D TVFPMFQQHCKRKSLPEF
Sbjct: 178 ADTKEGRYNPKMDPVIPVQNWRKGSQWVVLTRKHAKVVVKDITVFPMFQQHCKRKSLPEF 237

Query: 236 WREHSFPADPSKEHNCIPDEHYVQTLLAQEGLEGELTRRSLTYSSWDLSSSKDHERRGWH 295
           WR+  FP DPSKEHNCIPDEHYVQTLLAQEGLE ELTRRSLTYS+WDLS SKDHERR WH
Sbjct: 238 WRDRPFPNDPSKEHNCIPDEHYVQTLLAQEGLEEELTRRSLTYSAWDLSYSKDHERRNWH 297

Query: 296 PATYKYADATPLLIQSIKEIDNIYYETEHRREWCSDKGKPSSCFLFARKFTRPAALRLLT 355
           P TYK++DAT  LIQSIK IDNIYYETE+RREWC+ KGKPS CFLFARKFTRPAALRLL 
Sbjct: 298 PVTYKFSDATLDLIQSIKGIDNIYYETEYRREWCTSKGKPSRCFLFARKFTRPAALRLLN 357

Query: 356 MSVLGA 361
           MS+LG 
Sbjct: 358 MSLLGV 363

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356511696|ref|XP_003524559.1| PREDICTED: uncharacterized protein LOC100791308 [Glycine max]

 Score =  585 bits (1508), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 276/369 (74%), Positives = 319/369 (86%), Gaps = 15/369 (4%)

Query: 1   MKRKVVYQQQQKFNYKWKRKVFAAILLGFCFGSLVLMQCQYTRI---MSLRPRFV----- 52
           MKRKVV        +KWK+K+FA IL+ FC GSL+ MQ +Y  +   +SL+ RFV     
Sbjct: 1   MKRKVV-------QHKWKKKLFALILVVFCLGSLLFMQTRYHHVAGLVSLQHRFVSEPEV 53

Query: 53  QKPKIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGTTRSIYFLDRQVN 112
           Q PK+AFLFIARNRLPLEMVWD FF+G + +FSI+VH RPGFL +K TTRS YFL+RQVN
Sbjct: 54  QGPKVAFLFIARNRLPLEMVWDAFFRGGDRKFSIFVHCRPGFLLNKATTRSPYFLNRQVN 113

Query: 113 DSIQVDWGGASMIEAERILLRHALADPFNDRFVFLSDSCIPLYNFSYTYNYIMSTSTSFV 172
           DS+QV+WG +SMIEAER+LLRHAL+DP NDRFVFLSDSCIPLYNFSYTY+YIMSTSTSFV
Sbjct: 114 DSVQVEWGESSMIEAERVLLRHALSDPLNDRFVFLSDSCIPLYNFSYTYDYIMSTSTSFV 173

Query: 173 DSFADTKEGRYNPKMAPVIPVHNWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCKRKSL 232
           DSFADTKEGRYNPKM PVIPV+NWRKGSQWAVLTRKHA++VV D TVFPMFQ++CK+K L
Sbjct: 174 DSFADTKEGRYNPKMDPVIPVYNWRKGSQWAVLTRKHAKVVVEDETVFPMFQRYCKKKPL 233

Query: 233 PEFWREHSFPADPSKEHNCIPDEHYVQTLLAQEGLEGELTRRSLTYSSWDLSSSKDHERR 292
           PEFWR H  PAD SK HNCIPDEHYVQTLLAQ+GLE E+TRRSLT++SWD+S+S++HERR
Sbjct: 234 PEFWRAHYIPADTSKVHNCIPDEHYVQTLLAQKGLEEEITRRSLTHTSWDISNSREHERR 293

Query: 293 GWHPATYKYADATPLLIQSIKEIDNIYYETEHRREWCSDKGKPSSCFLFARKFTRPAALR 352
           GWHP TYKY+DATP+L++ +KEIDNIYYETE+RREWCS KGKPS+CFLFARKFTR AALR
Sbjct: 294 GWHPVTYKYSDATPMLLKFVKEIDNIYYETEYRREWCSSKGKPSTCFLFARKFTRTAALR 353

Query: 353 LLTMSVLGA 361
           LL MSVLG 
Sbjct: 354 LLNMSVLGV 362

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297811585|ref|XP_002873676.1| hypothetical protein ARALYDRAFT_909422 [Arabidopsis lyrata subsp. lyrata] gi|297319513|gb|EFH49935.1| hypothetical protein ARALYDRAFT_909422 [Arabidopsis lyrata subsp. lyrata]

 Score =  578 bits (1491), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 271/364 (74%), Positives = 312/364 (85%), Gaps = 8/364 (2%)

Query: 1   MKRKVVYQQQQKFNYKWKRKVFAAILLGFCFGSLVLMQCQYTRIMS-----LRPRFVQKP 55
           MK+KV    QQK  Y+WKRKV+A ++  FC G+ V +Q ++  I +      +PR  QKP
Sbjct: 1   MKKKV---SQQKLLYRWKRKVYATLMFAFCLGTFVFIQARFNGITASLDSLKKPRLDQKP 57

Query: 56  KIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGTTRSIYFLDRQVNDSI 115
           +IAFLFIARNRLPLE+VWD FF+GE+ +FSIYVHSRPGF+ S+ TTRS +FLDRQVNDSI
Sbjct: 58  QIAFLFIARNRLPLELVWDAFFQGEDGKFSIYVHSRPGFVLSEATTRSKFFLDRQVNDSI 117

Query: 116 QVDWGGASMIEAERILLRHALADPFNDRFVFLSDSCIPLYNFSYTYNYIMSTSTSFVDSF 175
           QVDWG ++MIEAER+LLRHAL DPFN RFVFLSDSCIPLY+FSYTYNYIMST TSFVDSF
Sbjct: 118 QVDWGESTMIEAERVLLRHALRDPFNHRFVFLSDSCIPLYSFSYTYNYIMSTPTSFVDSF 177

Query: 176 ADTKEGRYNPKMAPVIPVHNWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCKRKSLPEF 235
           ADTK+ RYNP+M P+IPVHNWRKGSQW VL RKHAEIVVNDT+VFPMFQQHC+RKSLPEF
Sbjct: 178 ADTKDSRYNPRMNPIIPVHNWRKGSQWVVLNRKHAEIVVNDTSVFPMFQQHCRRKSLPEF 237

Query: 236 WREHSFPADPSKEHNCIPDEHYVQTLLAQEGLEGELTRRSLTYSSWDLSSSKDHERRGWH 295
           WR+   PA+  KEHNCIPDEHYVQTLL+Q+G++ ELTRRSLT+S+WDLSSSK +ERRGWH
Sbjct: 238 WRDRPVPAEGWKEHNCIPDEHYVQTLLSQKGVDSELTRRSLTHSAWDLSSSKSNERRGWH 297

Query: 296 PATYKYADATPLLIQSIKEIDNIYYETEHRREWCSDKGKPSSCFLFARKFTRPAALRLLT 355
           P TYK++DATP LIQSIK IDNI YETE+RREWCS KGKPS CFLFARKFTRPAALRLL 
Sbjct: 298 PMTYKFSDATPDLIQSIKGIDNINYETEYRREWCSHKGKPSPCFLFARKFTRPAALRLLR 357

Query: 356 MSVL 359
            S+L
Sbjct: 358 ESIL 361

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224060092|ref|XP_002300039.1| predicted protein [Populus trichocarpa] gi|222847297|gb|EEE84844.1| predicted protein [Populus trichocarpa]

 Score =  578 bits (1490), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 270/314 (85%), Positives = 292/314 (92%), Gaps = 1/314 (0%)

Query: 44  IMSLRPRF-VQKPKIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGTTR 102
           + SLR  F VQKPKIAFLFIARNRLPL+M+WD FFKG+ESRFSI+VHSRPGFLF+K  TR
Sbjct: 31  LASLRSHFIVQKPKIAFLFIARNRLPLDMLWDAFFKGQESRFSIFVHSRPGFLFNKANTR 90

Query: 103 SIYFLDRQVNDSIQVDWGGASMIEAERILLRHALADPFNDRFVFLSDSCIPLYNFSYTYN 162
           S YFL+RQVNDSIQVDWGGASMIEAERILLRHAL DP N+RFVFLSDSCIPLYNFSYTY+
Sbjct: 91  SEYFLNRQVNDSIQVDWGGASMIEAERILLRHALVDPLNERFVFLSDSCIPLYNFSYTYD 150

Query: 163 YIMSTSTSFVDSFADTKEGRYNPKMAPVIPVHNWRKGSQWAVLTRKHAEIVVNDTTVFPM 222
           YIMSTSTSFVDSFADTKEGRYNPKMAP++PV+NWRKGSQW VLTRKHAE+VVNDTTVFPM
Sbjct: 151 YIMSTSTSFVDSFADTKEGRYNPKMAPLVPVYNWRKGSQWVVLTRKHAEVVVNDTTVFPM 210

Query: 223 FQQHCKRKSLPEFWREHSFPADPSKEHNCIPDEHYVQTLLAQEGLEGELTRRSLTYSSWD 282
           FQQHCKR+SLPEFWR+H  PAD S EHNCIPDEHYVQTLLA+EGLEGE+TRRSLT+SSWD
Sbjct: 211 FQQHCKRRSLPEFWRDHPIPADTSMEHNCIPDEHYVQTLLAREGLEGEITRRSLTHSSWD 270

Query: 283 LSSSKDHERRGWHPATYKYADATPLLIQSIKEIDNIYYETEHRREWCSDKGKPSSCFLFA 342
           LSSSKD ERRGWHP TYK++DATP LIQSIK+IDNIYYETE+RREWCS KGKPS CFLFA
Sbjct: 271 LSSSKDPERRGWHPVTYKFSDATPTLIQSIKDIDNIYYETEYRREWCSSKGKPSRCFLFA 330

Query: 343 RKFTRPAALRLLTM 356
           RKFTRPAA RLL M
Sbjct: 331 RKFTRPAAFRLLNM 344

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356573337|ref|XP_003554818.1| PREDICTED: uncharacterized protein LOC100776366 [Glycine max]

 Score =  575 bits (1482), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 273/369 (73%), Positives = 316/369 (85%), Gaps = 14/369 (3%)

Query: 1   MKRKVVYQQQQKFNYKWKRKVFAAILLGFCFGSLVLMQCQYTRI---MSLRPRFV----- 52
           MKR  + Q      +KWK+K+FA IL+ FC GSL+ MQ +Y  +   +SL+ RFV     
Sbjct: 1   MKRNKLVQ------HKWKKKLFALILVVFCLGSLLFMQTRYHHVAGLVSLQHRFVSEPEV 54

Query: 53  QKPKIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGTTRSIYFLDRQVN 112
           Q PKIAFLFIARNRLPLEMVWD FF+G +S+FSI+VH RPGFL +K TTRS YFL+RQVN
Sbjct: 55  QGPKIAFLFIARNRLPLEMVWDAFFRGGDSKFSIFVHCRPGFLLNKATTRSPYFLNRQVN 114

Query: 113 DSIQVDWGGASMIEAERILLRHALADPFNDRFVFLSDSCIPLYNFSYTYNYIMSTSTSFV 172
           DS+QV+WG ASMIEAER+LLRHAL+DP NDRFVFLSDSCIPLYNFSYTY+YIMSTSTSFV
Sbjct: 115 DSVQVEWGEASMIEAERVLLRHALSDPLNDRFVFLSDSCIPLYNFSYTYDYIMSTSTSFV 174

Query: 173 DSFADTKEGRYNPKMAPVIPVHNWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCKRKSL 232
           DSFADTKEGRYNPKM PVIPV+NWRKGSQW VLTRKHA++VV D TVF MFQ++CK+K L
Sbjct: 175 DSFADTKEGRYNPKMDPVIPVYNWRKGSQWGVLTRKHAKVVVEDETVFLMFQRYCKKKPL 234

Query: 233 PEFWREHSFPADPSKEHNCIPDEHYVQTLLAQEGLEGELTRRSLTYSSWDLSSSKDHERR 292
           PEFWR H  PAD SK HNCIPDEHYVQTLLAQ+GLE E+TRRSLT++SWD+S+S++++RR
Sbjct: 235 PEFWRAHYIPADTSKVHNCIPDEHYVQTLLAQKGLEEEITRRSLTHTSWDISNSREYDRR 294

Query: 293 GWHPATYKYADATPLLIQSIKEIDNIYYETEHRREWCSDKGKPSSCFLFARKFTRPAALR 352
           GWHP TYKY+DATP+L+  IKEIDNIY+ETE+RREWCS KGKPS+CFLFARKFTR AALR
Sbjct: 295 GWHPVTYKYSDATPMLLNFIKEIDNIYFETEYRREWCSSKGKPSTCFLFARKFTRTAALR 354

Query: 353 LLTMSVLGA 361
           LL MSVLG 
Sbjct: 355 LLNMSVLGV 363

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42567851|ref|NP_196959.2| Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana] gi|209863160|gb|ACI88738.1| At5g14550 [Arabidopsis thaliana] gi|332004663|gb|AED92046.1| Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana]

 Score =  570 bits (1470), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 268/371 (72%), Positives = 310/371 (83%), Gaps = 15/371 (4%)

Query: 1   MKRKVVYQQQQKFNYKWKRKVFAAILLGFCFGSLVLMQCQYTRIMSL------------R 48
           MK+KV    QQK  Y+WKRKV+A ++  FCFG+ V +Q ++  I +             +
Sbjct: 1   MKKKV---SQQKLLYRWKRKVYATLMFAFCFGTFVFIQARFASIQARFNRISASLDSLKK 57

Query: 49  PRFVQKPKIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGTTRSIYFLD 108
           PR  Q+P+IAFLFIARNRLPLE VWD FFKGE+ +FSIYVHSRPGF+ ++ TTRS YFLD
Sbjct: 58  PRLDQRPQIAFLFIARNRLPLEFVWDAFFKGEDGKFSIYVHSRPGFVLNEATTRSKYFLD 117

Query: 109 RQVNDSIQVDWGGASMIEAERILLRHALADPFNDRFVFLSDSCIPLYNFSYTYNYIMSTS 168
           RQ+NDSIQVDWG ++MIEAER+LLRHAL D FN RFVFLSDSCIPLY+FSYTYNYIMST 
Sbjct: 118 RQLNDSIQVDWGESTMIEAERVLLRHALRDSFNHRFVFLSDSCIPLYSFSYTYNYIMSTP 177

Query: 169 TSFVDSFADTKEGRYNPKMAPVIPVHNWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCK 228
           TSFVDSFADTK+ RYNP+M P+IPV NWRKGSQW VL RKHAEIVVNDT+VFPMFQQHC+
Sbjct: 178 TSFVDSFADTKDSRYNPRMNPIIPVRNWRKGSQWVVLNRKHAEIVVNDTSVFPMFQQHCR 237

Query: 229 RKSLPEFWREHSFPADPSKEHNCIPDEHYVQTLLAQEGLEGELTRRSLTYSSWDLSSSKD 288
           RKSLPEFWR+   PA+  KEHNCIPDEHYVQTLL+Q+G++ ELTRRSLT+S+WDLSSSK 
Sbjct: 238 RKSLPEFWRDRPVPAEGWKEHNCIPDEHYVQTLLSQKGVDSELTRRSLTHSAWDLSSSKS 297

Query: 289 HERRGWHPATYKYADATPLLIQSIKEIDNIYYETEHRREWCSDKGKPSSCFLFARKFTRP 348
           +ERRGWHP TYK++DATP LIQSIK IDNI YETE+RREWCS KGKPS CFLFARKFTRP
Sbjct: 298 NERRGWHPMTYKFSDATPDLIQSIKGIDNINYETEYRREWCSSKGKPSPCFLFARKFTRP 357

Query: 349 AALRLLTMSVL 359
           AALRLL  ++L
Sbjct: 358 AALRLLRETIL 368

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|51968788|dbj|BAD43086.1| putative protein [Arabidopsis thaliana]

 Score =  568 bits (1463), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 267/371 (71%), Positives = 309/371 (83%), Gaps = 15/371 (4%)

Query: 1   MKRKVVYQQQQKFNYKWKRKVFAAILLGFCFGSLVLMQCQYTRIMSL------------R 48
           MK+KV    QQK  Y+WKRKV+A ++  FCFG+ V +Q ++  I +             +
Sbjct: 1   MKKKV---SQQKLLYRWKRKVYATLMFAFCFGTFVFIQARFASIQARFNRISASLDSLKK 57

Query: 49  PRFVQKPKIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGTTRSIYFLD 108
           PR  Q+P+IAFLFIARNRLPLE VWD FFKGE+ +FSIYVHSRPGF+ ++ TTRS YFLD
Sbjct: 58  PRLDQRPQIAFLFIARNRLPLEFVWDAFFKGEDGKFSIYVHSRPGFVLNEATTRSKYFLD 117

Query: 109 RQVNDSIQVDWGGASMIEAERILLRHALADPFNDRFVFLSDSCIPLYNFSYTYNYIMSTS 168
           RQ+NDSIQVDWG ++MIEAER+LLRHAL D FN RFVFLSDSCIPLY+FSYTYNYIMST 
Sbjct: 118 RQLNDSIQVDWGESTMIEAERVLLRHALRDSFNHRFVFLSDSCIPLYSFSYTYNYIMSTP 177

Query: 169 TSFVDSFADTKEGRYNPKMAPVIPVHNWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCK 228
           TSFVDSFADTK+ RYNP+M P+IPV NWRKGSQW VL RKHAEIVVNDT+VFPMFQQHC+
Sbjct: 178 TSFVDSFADTKDSRYNPRMNPIIPVRNWRKGSQWVVLNRKHAEIVVNDTSVFPMFQQHCR 237

Query: 229 RKSLPEFWREHSFPADPSKEHNCIPDEHYVQTLLAQEGLEGELTRRSLTYSSWDLSSSKD 288
           RKSLPEFWR+   PA+  KEHNCIPDEHYVQTLL+Q+G++ ELTRRSLT+S+WDLSSSK 
Sbjct: 238 RKSLPEFWRDRPVPAEGWKEHNCIPDEHYVQTLLSQKGVDSELTRRSLTHSAWDLSSSKS 297

Query: 289 HERRGWHPATYKYADATPLLIQSIKEIDNIYYETEHRREWCSDKGKPSSCFLFARKFTRP 348
           +ERRGWHP TYK++DATP LIQSIK IDN  YETE+RREWCS KGKPS CFLFARKFTRP
Sbjct: 298 NERRGWHPMTYKFSDATPDLIQSIKGIDNNNYETEYRREWCSSKGKPSPCFLFARKFTRP 357

Query: 349 AALRLLTMSVL 359
           AALRLL  ++L
Sbjct: 358 AALRLLRETIL 368

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296087625|emb|CBI34881.3| unnamed protein product [Vitis vinifera]

 Score =  560 bits (1444), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 261/317 (82%), Positives = 288/317 (90%), Gaps = 1/317 (0%)

Query: 51  FVQKPKIAFLFIARNRLPLEMVWDKFFKGE-ESRFSIYVHSRPGFLFSKGTTRSIYFLDR 109
           F+Q+PKIAFLFIARNRLPL++VWD FF+ E E++FSI+VHSRPGFL +K TTRS+YFL+R
Sbjct: 5   FLQRPKIAFLFIARNRLPLDVVWDAFFRDEKENKFSIFVHSRPGFLLNKATTRSVYFLNR 64

Query: 110 QVNDSIQVDWGGASMIEAERILLRHALADPFNDRFVFLSDSCIPLYNFSYTYNYIMSTST 169
           Q+NDSIQVDWG ASMI+AERILLR AL DP N+RFVFLSDSCIPLYNFSY Y+YIMSTST
Sbjct: 65  QLNDSIQVDWGEASMIQAERILLRSALLDPLNERFVFLSDSCIPLYNFSYIYDYIMSTST 124

Query: 170 SFVDSFADTKEGRYNPKMAPVIPVHNWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCKR 229
           SFVDSFADTKEGRYNPKM PVIPVHNWRKGSQW VLTRKHA+IVV D TVFPMFQQHCKR
Sbjct: 125 SFVDSFADTKEGRYNPKMDPVIPVHNWRKGSQWVVLTRKHAQIVVEDDTVFPMFQQHCKR 184

Query: 230 KSLPEFWREHSFPADPSKEHNCIPDEHYVQTLLAQEGLEGELTRRSLTYSSWDLSSSKDH 289
           KSLPEFWR+H  PAD SKEHNCIPDEHYVQTLLAQEG E E+TRRSLT+SSWDLSSSKD 
Sbjct: 185 KSLPEFWRDHPLPADASKEHNCIPDEHYVQTLLAQEGFEEEITRRSLTHSSWDLSSSKDR 244

Query: 290 ERRGWHPATYKYADATPLLIQSIKEIDNIYYETEHRREWCSDKGKPSSCFLFARKFTRPA 349
           ER+GWHP TYK++DATP+LIQSIK+IDNIYYETE+RREWC+ KGKP+ CFLFARKFTRPA
Sbjct: 245 ERKGWHPLTYKFSDATPMLIQSIKDIDNIYYETEYRREWCTSKGKPAPCFLFARKFTRPA 304

Query: 350 ALRLLTMSVLGANSNEA 366
           ALRLL MS LGA   E 
Sbjct: 305 ALRLLNMSALGAFHGET 321

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357520047|ref|XP_003630312.1| BC10 protein [Medicago truncatula] gi|355524334|gb|AET04788.1| BC10 protein [Medicago truncatula]

 Score =  554 bits (1427), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 262/346 (75%), Positives = 301/346 (86%), Gaps = 7/346 (2%)

Query: 22  FAAILLG-FCFGSLVLMQCQYTRIM---SLRPRFV---QKPKIAFLFIARNRLPLEMVWD 74
           FA IL+   CFGSL+ MQ +YT ++   SL+ + V   QKPKIAFLFIARNRLPLE+VWD
Sbjct: 15  FALILVVVLCFGSLLFMQMRYTHVLGLVSLQHQLVSQVQKPKIAFLFIARNRLPLELVWD 74

Query: 75  KFFKGEESRFSIYVHSRPGFLFSKGTTRSIYFLDRQVNDSIQVDWGGASMIEAERILLRH 134
            FF+G ++ FSI+VH RPGF+ ++ TTRS YFL+RQVNDSIQ+DWG ASMIEAERILLRH
Sbjct: 75  AFFRGGDNNFSIFVHPRPGFVLNEATTRSSYFLNRQVNDSIQIDWGEASMIEAERILLRH 134

Query: 135 ALADPFNDRFVFLSDSCIPLYNFSYTYNYIMSTSTSFVDSFADTKEGRYNPKMAPVIPVH 194
           AL DP NDRFVFLSDSCIPLYNFSYTY+YIMST TSFVDSFADTK GRYNPKM PVIPV+
Sbjct: 135 ALDDPLNDRFVFLSDSCIPLYNFSYTYDYIMSTPTSFVDSFADTKGGRYNPKMDPVIPVY 194

Query: 195 NWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCKRKSLPEFWREHSFPADPSKEHNCIPD 254
           NWRKGSQWAVLTRKHA++VV D TVFPMFQ+ CK+K LPEFWR+   PAD SK HNCIPD
Sbjct: 195 NWRKGSQWAVLTRKHAKVVVEDDTVFPMFQKFCKKKPLPEFWRDQVIPADTSKIHNCIPD 254

Query: 255 EHYVQTLLAQEGLEGELTRRSLTYSSWDLSSSKDHERRGWHPATYKYADATPLLIQSIKE 314
           EHYVQTLLAQ+ LE ELTRRS+T+++WD+S+S+D ERRGWHP TYK++DATP+LI+ IKE
Sbjct: 255 EHYVQTLLAQKDLEKELTRRSVTHTAWDISNSRDRERRGWHPVTYKFSDATPMLIKFIKE 314

Query: 315 IDNIYYETEHRREWCSDKGKPSSCFLFARKFTRPAALRLLTMSVLG 360
           IDNIYYETE+RREWC+ KGKPS+CFLFARKFTR AALRLL MSVLG
Sbjct: 315 IDNIYYETEYRREWCTSKGKPSTCFLFARKFTRTAALRLLNMSVLG 360

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	374
TAIR|locus:2222637	377	AT5G14550 [Arabidopsis thalian	0.951	0.944	0.700	4.8e-142
TAIR|locus:2008890	383	AT1G11940 [Arabidopsis thalian	0.922	0.900	0.483	2.8e-89
TAIR|locus:504956294	378	AT1G62305 [Arabidopsis thalian	0.807	0.798	0.543	2.6e-86
TAIR|locus:2165605	388	AT5G57270 [Arabidopsis thalian	0.529	0.510	0.440	1.3e-51
TAIR|locus:2128181	376	AT4G31350 [Arabidopsis thalian	0.542	0.539	0.394	3.7e-50
TAIR|locus:2012748	412	AT1G10280 [Arabidopsis thalian	0.486	0.441	0.439	6.8e-49
TAIR|locus:2181442	411	AT5G16170 [Arabidopsis thalian	0.483	0.440	0.468	3.7e-48
TAIR|locus:2059040	394	AT2G19160 [Arabidopsis thalian	0.526	0.5	0.426	7.7e-48
TAIR|locus:2202324	408	AT1G68390 [Arabidopsis thalian	0.497	0.455	0.389	1.1e-46
TAIR|locus:2126525	401	AT4G30060 [Arabidopsis thalian	0.529	0.493	0.395	4.7e-46

TAIR|locus:2222637 AT5G14550 [Arabidopsis thaliana (taxid:3702)]

 Score = 1389 (494.0 bits), Expect = 4.8e-142, P = 4.8e-142
 Identities = 260/371 (70%), Positives = 299/371 (80%)

Query:     1 MKRKVVYQQQQKFNYKWKRKVFAAILLGFCFGSLVLMQCQYTRIM--------SL----R 48
             MK+KV    QQK  Y+WKRKV+A ++  FCFG+ V +Q ++  I         SL    +
Sbjct:     1 MKKKV---SQQKLLYRWKRKVYATLMFAFCFGTFVFIQARFASIQARFNRISASLDSLKK 57

Query:    49 PRFVQKPKIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGTTRSIYFLD 108
             PR  Q+P+IAFLFIARNRLPLE VWD FFKGE+ +FSIYVHSRPGF+ ++ TTRS YFLD
Sbjct:    58 PRLDQRPQIAFLFIARNRLPLEFVWDAFFKGEDGKFSIYVHSRPGFVLNEATTRSKYFLD 117

Query:   109 RQVNDSIQVDWGGASMIEAERILLRHALADPFNDRFVFLSDSCIPLYNFSYTYNYIMSTS 168
             RQ+NDSIQVDWG ++MIEAER+LLRHAL D FN RFVFLSDSCIPLY+FSYTYNYIMST 
Sbjct:   118 RQLNDSIQVDWGESTMIEAERVLLRHALRDSFNHRFVFLSDSCIPLYSFSYTYNYIMSTP 177

Query:   169 TSFVDSFADTKEGRYNPKMAPVIPVHNWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCK 228
             TSFVDSFADTK+ RYNP+M P+IPV NWRKGSQW VL RKHAEIVVNDT+VFPMFQQHC+
Sbjct:   178 TSFVDSFADTKDSRYNPRMNPIIPVRNWRKGSQWVVLNRKHAEIVVNDTSVFPMFQQHCR 237

Query:   229 RKSLPEFWREHSFPADPSKEHNCIPDEHYVQTLLAQEGLEGELTRRXXXXXXXXXXXXKD 288
             RKSLPEFWR+   PA+  KEHNCIPDEHYVQTLL+Q+G++ ELTRR            K 
Sbjct:   238 RKSLPEFWRDRPVPAEGWKEHNCIPDEHYVQTLLSQKGVDSELTRRSLTHSAWDLSSSKS 297

Query:   289 HERRGWHPATYKYADATPLLIQSIKEIDNIYYETEHRREWCSDKGKPSSCFLFARKFTRP 348
             +ERRGWHP TYK++DATP LIQSIK IDNI YETE+RREWCS KGKPS CFLFARKFTRP
Sbjct:   298 NERRGWHPMTYKFSDATPDLIQSIKGIDNINYETEYRREWCSSKGKPSPCFLFARKFTRP 357

Query:   349 AALRLLTMSVL 359
             AALRLL  ++L
Sbjct:   358 AALRLLRETIL 368

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0007623 "circadian rhythm" evidence=RCA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2008890 AT1G11940 [Arabidopsis thaliana (taxid:3702)]

 Score = 891 (318.7 bits), Expect = 2.8e-89, P = 2.8e-89
 Identities = 175/362 (48%), Positives = 235/362 (64%)

Query:    20 KVFAAILLGFCFGSLVLMQCQYTRIMSLR-PRFV------------QKPKIAFLFIARNR 66
             K+  A  +  C  +L+ +Q QY    +L  P  V             +PK+AFLF+AR  
Sbjct:    25 KLVIAFSVALCLLALLRIQLQYNSFTTLSFPLSVARSQTPLHKYSGDRPKLAFLFLARRD 84

Query:    67 LPLEMVWDKFFKG-EESRFSIYVHSRPGFLFSKGTTRSIYFLDRQVNDSIQVDWGGASMI 125
             LPL+ +WD+FFKG + + FSIY+HS PGF+F++ TTRS YF +RQ+N+SI+V WG +SMI
Sbjct:    85 LPLDFMWDRFFKGVDHANFSIYIHSVPGFVFNEETTRSQYFYNRQLNNSIKVVWGESSMI 144

Query:   126 EAERILLRHALADPFNDRFVFLSDSCIPLYNFSYTYNYIMSTSTSFVDSFADTKEGRYNP 185
             EAER+LL  AL D  N RFV LSD C PLY+F Y Y Y++S+  SFVDSF  TKE RY+ 
Sbjct:   145 EAERLLLASALEDHSNQRFVLLSDRCAPLYDFGYIYKYLISSPRSFVDSFLHTKETRYSV 204

Query:   186 KMAPVIPVHNWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCKRKSLPEFWREHSFPADP 245
             KM+PVIP   WRKGSQW  L R HAE++VND  VFP+F++ CKR   P      ++    
Sbjct:   205 KMSPVIPEEKWRKGSQWIALIRSHAEVIVNDGIVFPVFKEFCKR--CPPLGTNEAWLFLK 262

Query:   246 SKEHNCIPDEHYVQTLLAQEGLEGELTRRXXXXXXXXXXXXKDHERRGWHPATYKYADAT 305
              K  NCIPDEHYVQTLL  +GLE E+ RR            K +E + WHP T+   ++ 
Sbjct:   263 QKRRNCIPDEHYVQTLLTMQGLESEMERRTVTYTVWNVSGTK-YEAKSWHPVTFTLENSG 321

Query:   306 PLLIQSIKEIDNIYYETEHRREWCSDKGKPSSCFLFARKFTRPAALRLLTMSVLGANSNE 365
             P  I+ IK+ID++YYE+E R EWC    KP  CFLFARKFT  AA+R+++  ++G+++N+
Sbjct:   322 PEEIKEIKKIDHVYYESESRTEWCKADSKPVPCFLFARKFTNEAAMRIVSEGLIGSSANK 381

Query:   366 AI 367
              +
Sbjct:   382 TL 383

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:504956294 AT1G62305 [Arabidopsis thaliana (taxid:3702)]

 Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
 Identities = 167/307 (54%), Positives = 212/307 (69%)

Query:    54 KPKIAFLFIARNRLPLEMVWDKFFKGEESR-FSIYVHSRPGFLFSKGTTRSIYFLDRQVN 112
             +PK+AFLF+AR  LPL+ +WD+FFK  + R FSIYVHS PGF+F + +TRS +F +RQ+ 
Sbjct:    67 RPKLAFLFLARRDLPLDFLWDRFFKSADQRNFSIYVHSIPGFVFDESSTRSHFFYNRQLK 126

Query:   113 DSIQVDWGGASMIEAERILLRHALADPFNDRFVFLSDSCIPLYNFSYTYNYIMSTSTSFV 172
             +SI+V WG +SMI AER+LL  AL DP N RFV LSDSC+PLY+F Y Y Y++S+  SFV
Sbjct:   127 NSIEVVWGESSMIAAERLLLASALEDPSNQRFVLLSDSCVPLYDFGYIYRYLVSSPKSFV 186

Query:   173 DSFADTKEGRYNPKMAPVIPVHNWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCKRKSL 232
             DSF D K+ RY  KM PVI    WRKGSQW  L R HAE++VND TVFP+FQ+ CKR SL
Sbjct:   187 DSFLD-KDNRYTMKMFPVIRKEKWRKGSQWISLIRSHAEVIVNDDTVFPVFQKFCKR-SL 244

Query:   233 PEFWREHSFPADPSKEHNCIPDEHYVQTLLAQEGLEGELTRRXXXXXXXXXXXXKDHERR 292
             P   R++       + HNCIPDEHYVQTLL   GLE E+ RR            K  E +
Sbjct:   245 PLDPRKNWLYLK-KRRHNCIPDEHYVQTLLTMRGLENEMERRTVTYTTWNLSAKKA-EAK 302

Query:   293 GWHPATYKYADATPLLIQSIKEIDNIYYETEHRREWCSDKGKPSSCFLFARKFTRPAALR 352
              WHP T+   +  P  I+ IK+I+++YYE+E+R EWC    KP  CFLFARKFTR AA+R
Sbjct:   303 SWHPLTFTSDNCGPEEIEGIKKINHVYYESEYRTEWCRANSKPVPCFLFARKFTRGAAMR 362

Query:   353 LLTMSVL 359
             LL+  ++
Sbjct:   363 LLSEGLI 369

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2165605 AT5G57270 [Arabidopsis thaliana (taxid:3702)]

 Score = 440 (159.9 bits), Expect = 1.3e-51, Sum P(2) = 1.3e-51
 Identities = 97/220 (44%), Positives = 132/220 (60%)

Query:    44 IMSLRPRFVQKPKIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGTTRS 103
             I+ L P    K KIAF+F+    LP E +WDKFF+G+E RFSIY+H  P  L     +R 
Sbjct:    86 ILRLPPALTAKSKIAFMFLTPGTLPFEKLWDKFFQGQEGRFSIYIH--PSRLRPVHISR- 142

Query:   104 IYFLDRQVNDSIQVDWGGASMIEAERILLRHALADPFNDRFVFLSDSCIPLYNFSYTYNY 163
              +F DR+++ S  V WG  SM++AER LL +AL DP N  FV LS+SCIPL+ F YTY Y
Sbjct:   143 -HFSDREIH-SDHVTWGRISMVDAERRLLANALEDPDNQHFVLLSESCIPLHTFDYTYRY 200

Query:   164 IMSTSTSFVDSFADTKE---GRYNPKMAPVIPVHNWRKGSQWAVLTRKHAEIVVNDTTVF 220
             +M  + SF+DSF D      GR+   M P IP  ++RKG+QW  + R+HA IV+ D   +
Sbjct:   201 LMHANVSFIDSFEDLGPHGTGRHMDHMLPEIPRQDFRKGAQWFTMKRQHAVIVMADGLYY 260

Query:   221 PMFQQHCKRKSLPEFWREHSFPADPSKEHNCIPDEHYVQT 260
               F+++C+    P          + +K  NCI DEHY+ T
Sbjct:   261 SKFREYCR----PG--------VEANK--NCIADEHYLPT 286

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2128181 AT4G31350 [Arabidopsis thaliana (taxid:3702)]

 Score = 413 (150.4 bits), Expect = 3.7e-50, Sum P(2) = 3.7e-50
 Identities = 90/228 (39%), Positives = 131/228 (57%)

Query:    38 QCQYTRIMSLRPRFVQKPKIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFS 97
             Q     IM+L       PK+AF+F+    LP E +W+ FF+G E++FS+YVH+      S
Sbjct:    71 QVVMNEIMNLPQSKTANPKLAFMFLTPGTLPFEPLWEMFFRGHENKFSVYVHASKK---S 127

Query:    98 KGTTRSIYFLDRQVNDSIQVDWGGASMIEAERILLRHALADPFNDRFVFLSDSCIPLYNF 157
                T S YF+ R ++ S +V WG  SM++AER LL HAL DP N  F+ LSDSC+PL++F
Sbjct:   128 PVHTSS-YFVGRDIH-SHKVAWGQISMVDAERRLLAHALVDPDNQHFILLSDSCVPLFDF 185

Query:   158 SYTYNYIMSTSTSFVDSFADTK---EGRYNPKMAPVIPVHNWRKGSQWAVLTRKHAEIVV 214
             +Y YN+++  + SF+D F D      GRY+  M P +   ++RKGSQW  + R+HA +V+
Sbjct:   186 NYIYNHLIFANLSFIDCFEDPGPHGSGRYSQHMLPEVEKKDFRKGSQWFSMKRRHAIVVM 245

Query:   215 NDTTVFPMFQQHCKRKSLPEFWREHSFPADPSKE-HNCIPDEHYVQTL 261
              D+  +  F+ +C+                P+ E  NC  DEHY  TL
Sbjct:   246 ADSLYYTKFKLYCR----------------PNMEGRNCYADEHYFPTL 277

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2012748 AT1G10280 [Arabidopsis thaliana (taxid:3702)]

 Score = 434 (157.8 bits), Expect = 6.8e-49, Sum P(2) = 6.8e-49
 Identities = 84/191 (43%), Positives = 126/191 (65%)

Query:    55 PKIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGTTRSIYFLDRQVNDS 114
             PK+AF+F+ R  LP+  +W+KFFKG E   S+YVH+ PG+      +R   F DRQ+  S
Sbjct:   142 PKVAFMFLTRGPLPMLPLWEKFFKGNEKYLSVYVHTPPGY--DMNVSRDSPFYDRQI-PS 198

Query:   115 IQVDWGGASMIEAERILLRHALADPFNDRFVFLSDSCIPLYNFSYTYNYIMSTSTSFVDS 174
              +V+WG   + +AE+ LL +AL D  N+RFV LS+SC+P+YNFS  Y Y+++++ SFVDS
Sbjct:   199 QRVEWGSPLLTDAEKRLLANALLDFSNERFVLLSESCVPVYNFSTVYTYLINSAYSFVDS 258

Query:   175 FAD-TK--EGRYNPKMAPVIPVHNWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCKRKS 231
             + + T+   GRY+ KM P I +H+WRKGSQW  + RK A  +++D+  + +F+Q C+   
Sbjct:   259 YDEPTRYGRGRYSRKMLPDIKLHHWRKGSQWFEVNRKIAIYIISDSKYYSLFKQFCRPAC 318

Query:   232 LPEFWREHSFP 242
              P+   EH  P
Sbjct:   319 YPD---EHYIP 326

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2181442 AT5G16170 [Arabidopsis thaliana (taxid:3702)]

 Score = 428 (155.7 bits), Expect = 3.7e-48, Sum P(2) = 3.7e-48
 Identities = 89/190 (46%), Positives = 122/190 (64%)

Query:    56 KIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGTTRSIYFLDRQVNDSI 115
             K+AF+F+   RLPL  +W+KFF+G E  +SIYVH+ P F  S   T S+++  R++  S 
Sbjct:   136 KVAFMFMTGGRLPLAGLWEKFFEGHEGFYSIYVHTNPSFQDSFPET-SVFY-SRRI-PSQ 192

Query:   116 QVDWGGASMIEAERILLRHALADPFNDRFVFLSDSCIPLYNFSYTYNYIMSTSTSFVDSF 175
              V WG +SM++AE+ LL +AL D  N RFV LSDSCIPLYNF+  Y+Y+  T+ SF+ SF
Sbjct:   193 PVYWGTSSMVDAEKRLLANALLDESNQRFVLLSDSCIPLYNFTTIYDYLTGTNLSFIGSF 252

Query:   176 ADTKE---GRYNPKMAPVIPVHNWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCKRKSL 232
              D ++   GRYN  M P I + +WRKGSQW   TR+ A  ++ DT  + +F QHCK    
Sbjct:   253 DDPRKSGRGRYNHTMYPHINITHWRKGSQWFETTRELALHIIEDTVYYKIFDQHCKP--- 309

Query:   233 PEFWREHSFP 242
             P +  EH  P
Sbjct:   310 PCYMDEHYIP 319

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2059040 AT2G19160 [Arabidopsis thaliana (taxid:3702)]

 Score = 412 (150.1 bits), Expect = 7.7e-48, Sum P(2) = 7.7e-48
 Identities = 96/225 (42%), Positives = 134/225 (59%)

Query:    42 TRIMSLRPRFVQKP-KIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGT 100
             + I+S  PR ++K  KIAF+F+    LP E +WD FF+G E +FS+Y+H+      SK T
Sbjct:    92 SEILS-SPRVIKKSSKIAFMFLTPGTLPFEKLWDLFFQGHEGKFSVYIHA------SKDT 144

Query:   101 T--RSIYFLDRQVNDSIQVDWGGASMIEAERILLRHALADPFNDRFVFLSDSCIPLYNFS 158
                 S YFL+R++  S +V WG  SMI+AER LL +AL DP N +FV LSDSC+PL +F 
Sbjct:   145 PVHTSRYFLNREIR-SDEVVWGRISMIDAERRLLTNALRDPENQQFVLLSDSCVPLRSFE 203

Query:   159 YTYNYIMSTSTSFVDSFADTKE---GRYNPKMAPVIPVHNWRKGSQWAVLTRKHAEIVVN 215
             Y YNY+M ++ S+VD F D      GR+   M P IP  ++RKG+QW  + R+HA + V 
Sbjct:   204 YMYNYMMHSNVSYVDCFDDPGPHGTGRHMDHMLPEIPREDFRKGAQWFSMKRQHAVVTVA 263

Query:   216 DTTVFPMFQQHCKRKSLPEFWREHSFPADPSKEHNCIPDEHYVQT 260
             D   +  F+ +C     P          + +K  NCI DEHY+ T
Sbjct:   264 DNLYYSKFRDYCG----PG--------VEGNK--NCIADEHYLPT 294

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2202324 AT1G68390 [Arabidopsis thaliana (taxid:3702)]

 Score = 393 (143.4 bits), Expect = 1.1e-46, Sum P(3) = 1.1e-46
 Identities = 76/195 (38%), Positives = 120/195 (61%)

Query:    51 FVQKPKIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGTTRSIYFLDRQ 110
             F + PK+AF+F+ +  LPL  +W++FF+G E  F+IYVHS P +  ++       F  R 
Sbjct:   133 FPRTPKVAFMFMTKGHLPLARLWERFFRGHEGLFTIYVHSYPSY--NQSDPEDSVFRGRH 190

Query:   111 VNDSIQVDWGGASMIEAERILLRHALADPFNDRFVFLSDSCIPLYNFSYTYNYIMSTSTS 170
             +  S +VDWG  +M+EAE+ LL +AL D  N+RFV LS+SCIPL+NF+  Y+Y+++++ +
Sbjct:   191 I-PSKRVDWGYVNMVEAEQRLLANALLDISNERFVLLSESCIPLFNFTTVYSYLINSTQT 249

Query:   171 FVDSF---ADTKEGRYNPKMAPVIPVHNWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHC 227
              V+S+        GRY+P M P + + +WRKGSQW  + R  A  +++D   +P+F  +C
Sbjct:   250 HVESYDQLGGVGRGRYSPLMQPHVQLRHWRKGSQWIEVDRAMALEIISDRIYWPLFYSYC 309

Query:   228 KRKSLPEFWREHSFP 242
                   +   EH  P
Sbjct:   310 HHGCYAD---EHYIP 321

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2126525 AT4G30060 [Arabidopsis thaliana (taxid:3702)]

 Score = 398 (145.2 bits), Expect = 4.7e-46, Sum P(2) = 4.7e-46
 Identities = 87/220 (39%), Positives = 127/220 (57%)

Query:    44 IMSLRPRFVQKPKIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVHSRPGFLFSKGTTRS 103
             I+S  P   +  KIAF+F+    LP E +WD+FF G E +FS+Y+H+       +    S
Sbjct:    97 ILSSPPVIRKNSKIAFMFLTPGTLPFERLWDRFFLGHEGKFSVYIHASK----ERPVHYS 152

Query:   104 IYFLDRQVNDSIQVDWGGASMIEAERILLRHALADPFNDRFVFLSDSCIPLYNFSYTYNY 163
              YFL+R++  S +V WG  SM++AER LL +AL D  N +FV LSDSC+PL +F Y YNY
Sbjct:   153 RYFLNREIR-SDEVVWGRISMVDAERRLLANALRDTSNQQFVLLSDSCVPLRSFEYIYNY 211

Query:   164 IMSTSTSFVDSFADTKE---GRYNPKMAPVIPVHNWRKGSQWAVLTRKHAEIVVNDTTVF 220
             +M ++ S+VD F D  +   GR+   M P IP  ++RKG+QW  + R+HA   + D+  +
Sbjct:   212 LMHSNLSYVDCFDDPGQHGAGRHMNHMLPEIPKKDFRKGAQWFTMKRQHAVATMADSLYY 271

Query:   221 PMFQQHCKRKSLPEFWREHSFPADPSKEHNCIPDEHYVQT 260
               F+ +C              P   + + NCI DEHY+ T
Sbjct:   272 SKFRDYCG-------------PGIENNK-NCIADEHYLPT 297

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00020688001 SubName- Full=Chromosome chr14 scaffold_21, whole genome shotgun sequence; (377 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	374
pfam02485	242	pfam02485, Branch, Core-2/I-Branching enzyme	5e-75

>gnl|CDD|217062 pfam02485, Branch, Core-2/I-Branching enzyme

 Score =  232 bits (593), Expect = 5e-75
 Identities = 100/271 (36%), Positives = 135/271 (49%), Gaps = 43/271 (15%)

Query: 57  IAFLFIA-RNRLPLEMVWDKFFKGEESRFSIYVHSR-PGFLFSKGTTR-SIYFLDRQVND 113
           IAF+F+  +  LP   +W +FF   ++ + IYV ++ P     +     S +F  R +  
Sbjct: 1   IAFMFLVYKGDLPFLPLWLRFFYHPQNLYCIYVDAKSPSEFKERLRALASCFFNVRVIPK 60

Query: 114 SIQVDWGGASMIEAERILLRHALA-DPFNDRFVFLSDSCIPLYNFSYTYNYIMST--STS 170
           S  V WGG SM++AER LL + L  DP  D FV LS+S IPL  F   Y Y+ S   + S
Sbjct: 61  SEPVTWGGHSMVDAERRLLANLLLLDPSWDYFVLLSESDIPLKTFDELYRYLSSLNGNNS 120

Query: 171 FVDSFADTK---EGRYNPKMAPVIPVHN----WRKGSQWAVLTRKHAEIVVNDTTVFPMF 223
           FV+SF D      GRYNP+M P I + +    WRKGSQW VL+R  AE VV+D   +P+F
Sbjct: 121 FVESFDDPGWKGRGRYNPRMLPEIKLSDLPLKWRKGSQWFVLSRAFAEYVVSDNLYYPLF 180

Query: 224 QQHCKRKSLPEFWREHSFPADPSKEHNCIPDEHYVQTLLAQEG-LEGELTRRSLTYSSWD 282
           + +C                     + C PDEHY  TLL   G        R+LTY  W 
Sbjct: 181 KYYC---------------------NTCYPDEHYFPTLLGMPGHFPNTCVNRTLTYVDWS 219

Query: 283 LSSSKDHERRGWHPATYKYADATPLLIQSIK 313
                   R G HP TY+  D  P  ++ I+
Sbjct: 220 --------RGGCHPKTYRPCDIGPEDLKRIR 242

This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. Length = 242

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	374
PLN03183	421	acetylglucosaminyltransferase family protein; Prov	100.0
PF02485	244	Branch: Core-2/I-Branching enzyme; InterPro: IPR00	100.0
KOG0799	439	consensus Branching enzyme [Carbohydrate transport	99.98

>PLN03183 acetylglucosaminyltransferase family protein; Provisional

Probab=100.00  E-value=1.2e-52  Score=422.25  Aligned_cols=246  Identities=20%  Similarity=0.222  Sum_probs=187.7

Q ss_pred             CCCcEEEEEEeC-CCCC-HHHHHHHHhccCCCceEEEEeeCCCCcccC------CCCc---cceeeccc-cCCccceecC
Q 017260           53 QKPKIAFLFIAR-NRLP-LEMVWDKFFKGEESRFSIYVHSRPGFLFSK------GTTR---SIYFLDRQ-VNDSIQVDWG  120 (374)
Q Consensus        53 ~~~kiAfLilah-~~~~-l~rL~~~~f~~~~~~~~IyIHvD~k~~~~~------~~~~---~~~F~nr~-i~~r~~V~WG  120 (374)
                      .+||+||||++| ++.+ ++||++++| ++  ++.+|||+|++++..+      ....   -..|.|.. +.++..|.||
T Consensus        76 ~~~r~AYLI~~h~~d~~~l~RLL~aLY-hp--rN~y~IHlDkKS~~~er~~l~~~v~~~~~~~~~~NV~vl~k~~~V~WG  152 (421)
T PLN03183         76 KLPRFAYLVSGSKGDLEKLWRTLRALY-HP--RNQYVVHLDLESPAEERLELASRVENDPMFSKVGNVYMITKANLVTYR  152 (421)
T ss_pred             CCCeEEEEEEecCCcHHHHHHHHHHhc-CC--CceEEEEecCCCChHHHHHHHHHhhccchhhccCcEEEEecceeeccC
Confidence            589999999999 6666 999999987 34  4477899999985321      0000   01222322 3678899999


Q ss_pred             CccHHHHHHHHHHHHhc-CCCCCEEEEecCCCccCCChHHH-HHHHhcC-CCccEeeccCCCC---CcccCCc-------
Q 017260          121 GASMIEAERILLRHALA-DPFNDRFVFLSDSCIPLYNFSYT-YNYIMST-STSFVDSFADTKE---GRYNPKM-------  187 (374)
Q Consensus       121 g~SlV~A~l~Ll~~AL~-~~~~d~fvlLSgsD~PL~s~~~I-~~~L~~~-~~sFI~~~~~~~~---~Ry~~~m-------  187 (374)
                      |+|||+|||++|+.+|+ ..+|||||||||+||||+++++| +.|+..+ ++|||++.++.++   .|+.+.+       
T Consensus       153 G~S~V~AtL~~m~~LL~~~~~WDyfinLSGsDyPLkTqdelI~~F~~~nr~~NFI~~~s~~~wk~~~r~~~~i~~pgl~~  232 (421)
T PLN03183        153 GPTMVANTLHACAILLKRSKDWDWFINLSASDYPLVTQDDLIHTFSTLDRNLNFIEHTSQLGWKEEKRAMPLIIDPGLYS  232 (421)
T ss_pred             ChHHHHHHHHHHHHHHhhCCCCCEEEEccCCcccccCHHHHHHHHHhCCCCceeeecccccccchhhhcceEEecCceee
Confidence            99999999999999998 67899999999999999999995 5566664 7999998764332   2222110       


Q ss_pred             -----------CCCCC-ccccccccceeEecHHHHHHhHcCCc-chHHHHHhhhhcCCccccccCCCCCCCCCCCCccCC
Q 017260          188 -----------APVIP-VHNWRKGSQWAVLTRKHAEIVVNDTT-VFPMFQQHCKRKSLPEFWREHSFPADPSKEHNCIPD  254 (374)
Q Consensus       188 -----------~p~ip-~~~~~~GSqW~~LtR~~ae~iv~d~~-~~~~F~~~~k~~~~~~~w~~~~~~~~~~~~~~~~pD  254 (374)
                                 .+.+| ..++++||+||+|||++|+||+...+ ....+..|+                    .++++||
T Consensus       233 ~~ks~~~~~~~~R~~P~~~~lf~GS~W~sLSR~fvey~l~~~dnlpr~ll~y~--------------------~~t~~pd  292 (421)
T PLN03183        233 TNKSDIYWVTPRRSLPTAFKLFTGSAWMVLSRSFVEYCIWGWDNLPRTLLMYY--------------------TNFVSSP  292 (421)
T ss_pred             cccchhhhhhhhccCCccccccCCCceEEecHHHHHHHHhcccchHHHHHHHH--------------------hcCCCCc
Confidence                       12345 36899999999999999999997543 222233333                    3688999


Q ss_pred             hhHHHHHHhcCC-CCCCccCCCeEEEecCCCCCCCCCCCCCCccccccCCCCHHHHHHHhhhccccccccccccccccCC
Q 017260          255 EHYVQTLLAQEG-LEGELTRRSLTYSSWDLSSSKDHERRGWHPATYKYADATPLLIQSIKEIDNIYYETEHRREWCSDKG  333 (374)
Q Consensus       255 E~yfqTlL~ns~-~~~~i~n~~LrYi~W~~~~~~~~~~~~~hP~~~~~~D~~~~~~~~i~~~~~~~~~~~~~~~~c~~~g  333 (374)
                      |+||||+|+|++ |+++++|+|||||+|++       +++.||++|+.+|+     ++|.+                   
T Consensus       293 E~fFqTVl~NS~~f~~t~vn~nLRyI~W~~-------~~~~~P~~l~~~D~-----~~l~~-------------------  341 (421)
T PLN03183        293 EGYFHTVICNVPEFAKTAVNHDLHYISWDN-------PPKQHPHTLSLNDT-----EKMIA-------------------  341 (421)
T ss_pred             hHHHHHHHhhcccccccccCCceeEEecCC-------CCCCCCcccCHHHH-----HHHHh-------------------
Confidence            999999999997 99999999999999995       44569999999998     88873                   


Q ss_pred             CCCccceEEeCCChhhHHHHHhhh
Q 017260          334 KPSSCFLFARKFTRPAALRLLTMS  357 (374)
Q Consensus       334 ~~~~~~lFARKF~~~~~~~Ll~~~  357 (374)
                         ++++|||||+.+  ..+|+++
T Consensus       342 ---S~~lFARKFd~d--~~vl~~I  360 (421)
T PLN03183        342 ---SGAAFARKFRRD--DPVLDKI  360 (421)
T ss_pred             ---CCCccccCCCCC--hHHHHHH
Confidence               788999999975  3444443

>PF02485 Branch: Core-2/I-Branching enzyme; InterPro: IPR003406 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=100.00  E-value=3.2e-48  Score=365.38  Aligned_cols=224  Identities=31%  Similarity=0.512  Sum_probs=148.7

Q ss_pred             EEEEEEeCC-CCC-HHHHHHHHhccCCCceEEEEeeCCCCcc---c---C-CCCccceeeccccCCccceecCCccHHHH
Q 017260           57 IAFLFIARN-RLP-LEMVWDKFFKGEESRFSIYVHSRPGFLF---S---K-GTTRSIYFLDRQVNDSIQVDWGGASMIEA  127 (374)
Q Consensus        57 iAfLilah~-~~~-l~rL~~~~f~~~~~~~~IyIHvD~k~~~---~---~-~~~~~~~F~nr~i~~r~~V~WGg~SlV~A  127 (374)
                      |||||+||+ +++ +++|++.++ .+++  .+|||+|++++.   +   . .....+++   .+++|+.|.|||+|+|+|
T Consensus         1 iAylil~h~~~~~~~~~l~~~l~-~~~~--~f~iHiD~k~~~~~~~~~~~~~~~~~nv~---~v~~r~~v~WG~~S~v~A   74 (244)
T PF02485_consen    1 IAYLILAHKNDPEQLERLLRLLY-HPDN--DFYIHIDKKSPDYFYEEIKKLISCFPNVH---FVPKRVDVRWGGFSLVEA   74 (244)
T ss_dssp             EEEEEEESS--HHHHHHHHHHH---TTS--EEEEEE-TTS-HHHHHHHHHHHCT-TTEE---E-SS-----TTSHHHHHH
T ss_pred             CEEEEEecCCCHHHHHHHHHHhc-CCCC--EEEEEEcCCCChHHHHHHHHhcccCCcee---ecccccccccCCccHHHH
Confidence            799999988 666 788888875 3444  667999998641   1   1 01112222   246799999999999999


Q ss_pred             HHHHHHHHhc-CCCCCEEEEecCCCccCCChHHHHHHHhcC--CCccEeeccCCCC---CcccCC----cCCCCCccccc
Q 017260          128 ERILLRHALA-DPFNDRFVFLSDSCIPLYNFSYTYNYIMST--STSFVDSFADTKE---GRYNPK----MAPVIPVHNWR  197 (374)
Q Consensus       128 ~l~Ll~~AL~-~~~~d~fvlLSgsD~PL~s~~~I~~~L~~~--~~sFI~~~~~~~~---~Ry~~~----m~p~ip~~~~~  197 (374)
                      ++.||++|++ +++|+|||||||+||||+++++|+++|+.+  +.+|+++...++.   .||.+.    +.+.++..+++
T Consensus        75 ~l~ll~~al~~~~~~~y~~llSg~D~Pl~s~~~i~~~l~~~~~~~~f~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~  154 (244)
T PF02485_consen   75 TLNLLREALKRDGDWDYFILLSGQDYPLKSNEEIHEFLESNNGDNNFIESFSDEDPRESGRYNPRIYDPFRPFFRKRTLY  154 (244)
T ss_dssp             HHHHHHHHHHH-S---EEEEEETTEEESS-HHHHHHHHHHTTT--B---BEE--GGGG-HHHHEEEETTEEEEEEEE--E
T ss_pred             HHHHHHHHHhcCCCCcEEEEcccccccccchHHHHHHHHhcCCCCcceecccccccchhhcceeeeeeeccccccccccc
Confidence            9999999999 889999999999999999999999999996  5788998776532   455543    22223334899


Q ss_pred             cccceeEecHHHHHHhHcCCcchHHHHHhhhhcCCccccccCCCCCCCCCCCCccCChhHHHHHHhcC-CCCCCccCCCe
Q 017260          198 KGSQWAVLTRKHAEIVVNDTTVFPMFQQHCKRKSLPEFWREHSFPADPSKEHNCIPDEHYVQTLLAQE-GLEGELTRRSL  276 (374)
Q Consensus       198 ~GSqW~~LtR~~ae~iv~d~~~~~~F~~~~k~~~~~~~w~~~~~~~~~~~~~~~~pDE~yfqTlL~ns-~~~~~i~n~~L  276 (374)
                      +|||||+|||++|+||+++....+.|+.+|+                    ++++|||+||||||+|+ .+++++.++++
T Consensus       155 ~GSqW~~Ltr~~v~~il~~~~~~~~~~~~~~--------------------~~~~pDE~ffqTll~n~~~~~~~~~~~~~  214 (244)
T PF02485_consen  155 KGSQWFSLTRDFVEYILDDPNYRPKLKKYFR--------------------FSLCPDESFFQTLLNNSGHFKDTIVNRNL  214 (244)
T ss_dssp             EE-S--EEEHHHHHHHHH-HHHHHHHHHHT---------------------TSSSGGGTHHHHH--SSGGG-B-TTTSSS
T ss_pred             ccceeeEeeHHHHHHhhhhHHHHHHHHHhhc--------------------CccCcchhhHHHhhcccchhcccccCCCE
Confidence            9999999999999999988888888887775                    78999999999999999 78889999999


Q ss_pred             EEEecCCCCCCCCCCCCCCccccccCCCCHHHHHHHh
Q 017260          277 TYSSWDLSSSKDHERRGWHPATYKYADATPLLIQSIK  313 (374)
Q Consensus       277 rYi~W~~~~~~~~~~~~~hP~~~~~~D~~~~~~~~i~  313 (374)
                      |||+|+.       ++++||++++..+++++.++.|+
T Consensus       215 r~i~W~~-------~~~~~p~~~~~~~~~~~d~~~~~  244 (244)
T PF02485_consen  215 RYIDWSR-------RGGCHPKTLTICDLGPEDLPWLK  244 (244)
T ss_dssp             EEE-BTG-------T-SS---SSEEEE--GGGHHHH-
T ss_pred             EEEECCC-------CCCCCCCeeeeeeeCHHHHHhhC
Confidence            9999983       57899999999999999998875

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase family 14 GT14 from CAZY, a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme (2.4.1.150 from EC) and core-2 branching enzyme (2.4.1.102 from EC). I-branching enzyme, an integral membrane protein, converts linear into branched poly-N-acetyllactosaminoglycans in the glycosylation pathway, and is responsible for the production of the blood group I-antigen during embryonic development []. Core-2 branching enzyme, also an integral membrane protein, forms crucial side-chain branches in O-glycans in the glycosylation pathway [].; GO: 0008375 acetylglucosaminyltransferase activity, 0016020 membrane; PDB: 3OTK_D 2GAM_A 2GAK_B.

>KOG0799 consensus Branching enzyme [Carbohydrate transport and metabolism]

Probab=99.98  E-value=5.4e-32  Score=275.71  Aligned_cols=224  Identities=19%  Similarity=0.237  Sum_probs=174.3

Q ss_pred             CCCcEEEEEEeCCCCC-HHHHHHHHhccCCCceEEEEeeCCCCccc--CCC-Cccceeecccc-CCccceecCCccHHHH
Q 017260           53 QKPKIAFLFIARNRLP-LEMVWDKFFKGEESRFSIYVHSRPGFLFS--KGT-TRSIYFLDRQV-NDSIQVDWGGASMIEA  127 (374)
Q Consensus        53 ~~~kiAfLilah~~~~-l~rL~~~~f~~~~~~~~IyIHvD~k~~~~--~~~-~~~~~F~nr~i-~~r~~V~WGg~SlV~A  127 (374)
                      .+..+||+.++|++.+ ++|+++++| +|+|.|+  ||+|.+++..  ... .-..+|.|..| +++..|.|||.|+++|
T Consensus       101 ~~~~~a~~~~v~kd~~~verll~aiY-hPqN~yc--ihvD~~s~~~fk~~~~~L~~cf~NV~v~~k~~~v~~~G~s~l~a  177 (439)
T KOG0799|consen  101 KPFPAAFLRVVYKDYEQVERLLQAIY-HPQNVYC--IHVDAKSPPEFRVAMQQLASCFPNVIVLPKRESVTYGGHSILAA  177 (439)
T ss_pred             cccceEEEEeecccHHHHHHHHHHHh-CCcCcce--EEECCCCCHHHHHHHHHHHhcCCceEEeccccceecCCchhhHH
Confidence            3446788888899998 899999999 6888887  9999998532  111 12456666444 4799999999999999


Q ss_pred             HHHHHHHHhc-CCCCCEEEEecCCCccCCChHHHHHHHhc-CCCccEeeccCCCC-----CcccC-----------CcCC
Q 017260          128 ERILLRHALA-DPFNDRFVFLSDSCIPLYNFSYTYNYIMS-TSTSFVDSFADTKE-----GRYNP-----------KMAP  189 (374)
Q Consensus       128 ~l~Ll~~AL~-~~~~d~fvlLSgsD~PL~s~~~I~~~L~~-~~~sFI~~~~~~~~-----~Ry~~-----------~m~p  189 (374)
                      .++||+.+++ ..+|+||++|||+||||+|++||.+.|+. +|.|||++....++     .++.+           .+.+
T Consensus       178 ~l~c~~~Ll~~~~~W~yfinLs~~D~PlkT~~elv~i~~~L~g~N~i~~~~~~~~~~~~~~k~~~~~~~~~~~~s~~~~~  257 (439)
T KOG0799|consen  178 HLNCLADLLKLSGDWDYFINLSNSDYPLKTNDELVRIFKILRGANFVEHTSEIGWKLNRKAKWDIIDLKYFRNKSPLPWV  257 (439)
T ss_pred             HHHHHHHHHhcCCCCceeeeccCCCcccCCHHHHHHHHHHcCCcccccCcccccHHHhcccCCcccccchheecCCCccc
Confidence            9999999998 55799999999999999999999999998 89999998765432     11110           1112


Q ss_pred             CCC-ccccccccceeEecHHHHHHhHcCCcchHHHHHhhhhcCCccccccCCCCCCCCCCCCccCChhHHHHHHhcCCCC
Q 017260          190 VIP-VHNWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCKRKSLPEFWREHSFPADPSKEHNCIPDEHYVQTLLAQEGLE  268 (374)
Q Consensus       190 ~ip-~~~~~~GSqW~~LtR~~ae~iv~d~~~~~~F~~~~k~~~~~~~w~~~~~~~~~~~~~~~~pDE~yfqTlL~ns~~~  268 (374)
                      .+| ..++++||.|++|+|.+|+|++.+... ..+.++++                    +++.|||+||+||++|+ +.
T Consensus       258 ~lp~~~ki~~Gs~~~~LsR~fv~y~i~~~~~-~~ll~~~~--------------------~t~~~dE~f~~Tl~~n~-~~  315 (439)
T KOG0799|consen  258 ILPTALKLFKGSAWVSLSRAFVEYLISGNLP-RTLLMYYN--------------------NTYSPDEGFFHTLQCNP-FG  315 (439)
T ss_pred             cCCCceEEEecceeEEEeHHHHHHHhcCccH-HHHHHHHh--------------------CccCcchhhhHhhhccc-cC
Confidence            345 468999999999999999999998444 34444443                    78999999999999999 76


Q ss_pred             CCccCCC--eEEEecCCCCCCCCCCCCCCccccccCCC
Q 017260          269 GELTRRS--LTYSSWDLSSSKDHERRGWHPATYKYADA  304 (374)
Q Consensus       269 ~~i~n~~--LrYi~W~~~~~~~~~~~~~hP~~~~~~D~  304 (374)
                      ....+.+  +||+.|+... ++  ..+.||..+...|.
T Consensus       316 ~~g~~~~~~lr~~~W~~~~-~~--~~~~~c~~~~~~~~  350 (439)
T KOG0799|consen  316 MPGVFNDECLRYTNWDRKD-VD--PPKQHCHSLTVRDF  350 (439)
T ss_pred             CCCcccchhhcceeccccc-cc--ccccCCcccccccc
Confidence            6666777  9999999633 22  25668888887765

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	374
2gak_A	391	Beta-1,6-N-acetylglucosaminyltransferase; glycopro	2e-25
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-07

>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A* Length = 391

 Score =  104 bits (261), Expect = 2e-25
 Identities = 38/315 (12%), Positives = 84/315 (26%), Gaps = 53/315 (16%)

Query: 53  QKPKIAFLFIARNRLPLEMVWDKFFKGEESRFSIYVH----SRPGFLFSKGTTRSIYFLD 108
               IA+  +  +++  EM+          +    +H    +   FL +     S +   
Sbjct: 82  VGFPIAYSIVVHHKI--EMLDRLLRAIYMPQNFYCIHVDRKAEESFLAAVQGIASCFDNV 139

Query: 109 RQVNDSIQVDWGGASMIEAERILLRHALADPFN-DRFVFLSDSCIPLYNFSYTYNYI-MS 166
              +    V +   + ++A+   ++       N    + L     P+         +  S
Sbjct: 140 FVASQLESVVYASWTRVKADLNCMKDLYRMNANWKYLINLCGMDFPIKTNLEIVRKLKCS 199

Query: 167 TSTSFVDSFADT--------------KEGRYNPKMAPVIPVHN--WRKGSQWAVLTRKHA 210
           T  + +++                       N  +    P        GS + V+TR++ 
Sbjct: 200 TGENNLETEKMPPNKEERWKKRYAVVDGKLTNTGIVKAPPPLKTPLFSGSAYFVVTREYV 259

Query: 211 EIVVNDTTVFPMFQQHCKRKSLPEFWREHSFPADPSKEHNCIPDEHYVQTLLAQEGLEGE 270
             V+ +  +  + +                       +    PDE    T+     + G 
Sbjct: 260 GYVLENENIQKLMEWA---------------------QDTYSPDEFLWATIQRIPEVPGS 298

Query: 271 LTRRSLTYSSWDLSSSKDHERRGWHPATYKYADATPLLIQSIKEIDNIYYETEHRREWCS 330
               +    S     +       W       ++  P    S   + ++         W  
Sbjct: 299 FPSSNKYDLSD---MNAIARFVKWQYFEGDVSNGAPYPPCSGVHVRSVCVFGAGDLSWML 355

Query: 331 DKGKPSSCFLFARKF 345
                    LFA KF
Sbjct: 356 -----RQHHLFANKF 365

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.9 bits (118), Expect = 9e-07
 Identities = 42/248 (16%), Positives = 79/248 (31%), Gaps = 70/248 (28%)

Query: 47  LRPRFVQKPKIAFLFIARN--RLP---LEMVWDKFFKGEESRFSIYVHSRPGFLFSKGTT 101
            R  F +      L +      +P   L ++W    K +       +H     L  K   
Sbjct: 371 YRKMFDR------LSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKY--SLVEKQPK 422

Query: 102 RSIYFL-DRQVNDSIQVDWGGASMIEAERILLRHALADPFNDRFVFLSDSCIPLYNFSYT 160
            S   +    +   ++++    +     R ++ H     +N    F SD  IP Y   Y 
Sbjct: 423 ESTISIPSIYLELKVKLE----NEYALHRSIVDH-----YNIPKTFDSDDLIPPYLDQYF 473

Query: 161 YNYI---MST----------STSFVD-SFADTKEGRYNPKMAPVIPVHNWR-KGSQWAVL 205
           Y++I   +               F+D  F + K  R++           W   GS    L
Sbjct: 474 YSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKI-RHDST--------AWNASGSILNTL 524

Query: 206 T-----RKHAEIVVNDTTVFPMFQQHCKRKSLPEFWREHSFPADPSKEHNCIPDEH--YV 258
                 + +  I  ND    P +++     ++ +F  +         E N I  ++   +
Sbjct: 525 QQLKFYKPY--ICDND----PKYER--LVNAILDFLPKI--------EENLICSKYTDLL 568

Query: 259 QTLLAQEG 266
           +  L  E 
Sbjct: 569 RIALMAED 576

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	374
2gak_A	391	Beta-1,6-N-acetylglucosaminyltransferase; glycopro	100.0

>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A*

Probab=100.00  E-value=1.3e-52  Score=421.18  Aligned_cols=275  Identities=12%  Similarity=0.114  Sum_probs=207.7

Q ss_pred             HHHHHHHHhhhhcccccCCCCCCCCCCcEEEEEEeCCCCC-HHHHHHHHhccCCCceEEEEeeCCCCccc--CCCC-ccc
Q 017260           29 FCFGSLVLMQCQYTRIMSLRPRFVQKPKIAFLFIARNRLP-LEMVWDKFFKGEESRFSIYVHSRPGFLFS--KGTT-RSI  104 (374)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kiAfLilah~~~~-l~rL~~~~f~~~~~~~~IyIHvD~k~~~~--~~~~-~~~  104 (374)
                      .|-......++ .+.++|.+   +.+|||||||++|++++ +++|+++++.   +.+.||||+|++++..  .... ...
T Consensus        62 ~C~~~~~~~~~-~~~pl~~~---e~~~kiAflil~h~d~~~l~rll~~ly~---p~n~y~IHvD~ks~~~~~~~~~~~~~  134 (391)
T 2gak_A           62 DCASFIRTRKY-IVEPLTKE---EVGFPIAYSIVVHHKIEMLDRLLRAIYM---PQNFYCIHVDRKAEESFLAAVQGIAS  134 (391)
T ss_dssp             SHHHHHHHHTC-CCSCSCHH---HHTSCEEEEEEECSCHHHHHHHHHHHCC---TTSEEEEEECTTSCHHHHHHHHHHHH
T ss_pred             Cchhhhhcccc-cCCCCCcc---ccCCCEEEEEEecCCHHHHHHHHHHHhC---CCCeEEEEEeCCCCHHHHHHHHHHHh
Confidence            45544332222 33444443   56799999999999988 8999999762   4457889999997521  1111 123


Q ss_pred             eeecccc-CCccceecCCccHHHHHHHHHHHHhc-CCCCCEEEEecCCCccCCChHHHHHHHhc-CCCccEeeccCCCC-
Q 017260          105 YFLDRQV-NDSIQVDWGGASMIEAERILLRHALA-DPFNDRFVFLSDSCIPLYNFSYTYNYIMS-TSTSFVDSFADTKE-  180 (374)
Q Consensus       105 ~F~nr~i-~~r~~V~WGg~SlV~A~l~Ll~~AL~-~~~~d~fvlLSgsD~PL~s~~~I~~~L~~-~~~sFI~~~~~~~~-  180 (374)
                      +|.|+.| .+|+.|.|||+|||+|+++||+.||+ +++|+|||||||+||||+|+++|++||+. +++|||++..++++ 
T Consensus       135 ~f~NV~v~~~~~~v~WGg~S~v~A~l~ll~~aL~~~~~w~yfilLSgsD~PLkt~~~i~~~l~~~~~~nFIe~~~~~~~~  214 (391)
T 2gak_A          135 CFDNVFVASQLESVVYASWTRVKADLNCMKDLYRMNANWKYLINLCGMDFPIKTNLEIVRKLKCSTGENNLETEKMPPNK  214 (391)
T ss_dssp             TCTTEEECSSCCCCCTTSHHHHHHHHHHHHHHHHHCSCCCEEEEEETTCEESSCHHHHHHHHHHTTTCCBCCBEECCGGG
T ss_pred             cCCCEEEeccCcccccCCchHHHHHHHHHHHHHhcCCCCCEEEEecCCCccccCHHHHHHHHHhcCCCceeeccCCCccc
Confidence            4555554 47999999999999999999999998 55899999999999999999999999998 68999999876543 


Q ss_pred             -Cccc--CC----------cC-CCCC-ccccccccceeEecHHHHHHhHcCCcchHHHHHhhhhcCCccccccCCCCCCC
Q 017260          181 -GRYN--PK----------MA-PVIP-VHNWRKGSQWAVLTRKHAEIVVNDTTVFPMFQQHCKRKSLPEFWREHSFPADP  245 (374)
Q Consensus       181 -~Ry~--~~----------m~-p~ip-~~~~~~GSqW~~LtR~~ae~iv~d~~~~~~F~~~~k~~~~~~~w~~~~~~~~~  245 (374)
                       .|+.  +.          +. +.+| ..++++|||||+|||++|++|++|.. .+.|.+||+                 
T Consensus       215 ~~R~~~~~~~~~~~l~~~~~~k~~~P~~~~~~~GSqW~~LtR~~v~~vl~d~~-~~~~~~~~k-----------------  276 (391)
T 2gak_A          215 EERWKKRYAVVDGKLTNTGIVKAPPPLKTPLFSGSAYFVVTREYVGYVLENEN-IQKLMEWAQ-----------------  276 (391)
T ss_dssp             SHHHHEEEEEETTEEEEEEEECCCCSCSSCCEECCSCCEEEHHHHHHHHHCHH-HHHHHHHHT-----------------
T ss_pred             ccceEeeeeccccceeeecccccCCccccceecccceeEecHHHHHHHHhCCc-HHHHHHHHc-----------------
Confidence             3332  11          11 1234 46899999999999999999999854 567777886                 


Q ss_pred             CCCCCccCChhHHHHHHhcCCCCCC----------ccCCCeEEEecCCCCCCCCCCCCCCcc----------ccccCCCC
Q 017260          246 SKEHNCIPDEHYVQTLLAQEGLEGE----------LTRRSLTYSSWDLSSSKDHERRGWHPA----------TYKYADAT  305 (374)
Q Consensus       246 ~~~~~~~pDE~yfqTlL~ns~~~~~----------i~n~~LrYi~W~~~~~~~~~~~~~hP~----------~~~~~D~~  305 (374)
                         ++|+|||+|||||+.++++.+.          .+++++|||+|+...+.-+ +|+.||.          +|+.+|+ 
T Consensus       277 ---~t~~pDE~ffqTll~~~~~pg~~~~~~~~~~~~~~~~lr~i~W~~~~g~~~-~G~p~p~c~~~~~~~~C~~~~~Dl-  351 (391)
T 2gak_A          277 ---DTYSPDEFLWATIQRIPEVPGSFPSSNKYDLSDMNAIARFVKWQYFEGDVS-NGAPYPPCSGVHVRSVCVFGAGDL-  351 (391)
T ss_dssp             ---TSSSGGGTHHHHHTTSTTSTTCCCSSGGGCBCTTTSSSEEECBTTTCSCGG-GTCSSCCCSSEEETTEEECCGGGH-
T ss_pred             ---CCcCCchhHHHHHhhccCCCCccccccccccccccCceEEEEecccCCccc-cCCCCCCCccceecceeeecHHHH-
Confidence               8999999999999998765443          3478999999985321111 2334676          6777776 


Q ss_pred             HHHHHHHhhhccccccccccccccccCCCCCccceEEeCCChhhHHHHHhhhhc
Q 017260          306 PLLIQSIKEIDNIYYETEHRREWCSDKGKPSSCFLFARKFTRPAALRLLTMSVL  359 (374)
Q Consensus       306 ~~~~~~i~~~~~~~~~~~~~~~~c~~~g~~~~~~lFARKF~~~~~~~Ll~~~~~  359 (374)
                          +.|+                      .+++||||||+++++..|++.++.
T Consensus       352 ----~~l~----------------------~s~~lFARKF~~~~d~~~l~~l~~  379 (391)
T 2gak_A          352 ----SWML----------------------RQHHLFANKFDMDVDPFAIQCLDE  379 (391)
T ss_dssp             ----HHHT----------------------TSCCSEEECCCTTTCHHHHHHHHH
T ss_pred             ----HHHH----------------------hCCCceEEccCCccCHHHHHHHHH
Confidence                7776                      379999999999999999988764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00