Citrus Sinensis ID: 017308

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370---
Protein Sequence
MDTECWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTGKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGIYDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETASSTLTCGYSICWNKSGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKNRLLQVFLSLKHESKIRCLAADISYRELKVVLIFWI
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHHHcccccccccccccEEEEEEEEEEccccEEEEEEccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEcccccEEEccccEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccccHHHHHHHHHHHHHHHHHHcccccccEEcEEEEcccccccccHHHHHHHHHHHHHcccccccccccccEEEccEEEEcccccccccccccccccccccccEEEEcccccEEEEcccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEEcccccEEEEEEEccccccccccccccccEEccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEccccccEEEcccEEEEEEEEcccccccccccccccccccccccccccccccccccEEccccccccccccccccccccccEEEEccHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEccccccccccccHHHHHHHHHHHHHHHccccccccEccccEEccccccccccccccccccccccccEEEEEEcccEEEEEcccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
mdtecwgdevSKKVLWQYKslpkkgkpqgrEVTVLAAFLISSPSKDLEVVALGTGtkcigrsllsphgdivndSHAEIVARRALLRFFYTEVLNKqkcsngieglrdDVFNNflfelgptgkyrfregWQLHLYISqlpcgdaslsschsaprnffsregnslssvdelngfkdgIYDSLQHIgrvqrkpgrgdttlsvsCSDKIARWNAVGVQGALLSYFLQpvylssitvgrspntsedfpleehlKRSLYdrilplseelsspfqvnkpiflaasvppeefqhsetasstltcgysicwnksglheVILGttgrkqgtsakgalspstqsslcKNRLLQVFLSLKHESKIRCLAADISYRELKVVLIFWI
Flexible Loop (DISEMBL)
mdtecwgdevskkVLWQYkslpkkgkpqgrEVTVLAAFLISSPSKDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTGKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGIYDSLQHigrvqrkpgrgdttLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETASSTLTCGYSICWNKSGLHEVILGTTGRKQGTSAKgalspstqsslCKNRLLQVFLSLKHEskirclaadisyrELKVVLIFWI
Low Complexity Region (SEG)
MDTECWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTGKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGIYDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETASSTLTCGYSICWNKSGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKNRLLQVFLSLKHESKIRCLAADISYRELKVVLIFWI
Disordered region (IsUnstruct)
****CWGDEVSKKVLWQYKSL********REVTVLAAFLISSPSKDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTGKYRFREGWQLHLYISQLPCGDASLSSC********************LNGFKDGIYDSLQHIGRVQ******DTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSITVG****************RSLYDRILPL*******FQVNKPIFLAA**************STLTCGYSICWNKSGLHEVILGTT*******************LCKNRLLQVFLSLKHESKIRCLAADISYRELKVVLIFW*
Disordered Region (DISOPRED)
****CWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQK*******************LGPTGKYRFREGWQLHLYISQLPCGDASLSSCHSAPR************************DSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASV*******************SICWNKSGLHEVILGTTGRKQGTSAK*ALSPSTQSSLCKNRLLQVFLSLKHESK**CLAADISYRELKVVLIFWI
Disordered Region (DISEMBL)
********EVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTGKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGIYDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVP************TLTCGYSICWNKSGLHEVILGTTG*****************SLCKNRLLQVFLSLKHESKIRCLAADISYRELKVVLIFWI
Disordered Region (DISPRO)
MDTECWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCS************NFLFELGPTGKYRFREGWQLHLYISQLPCGDASLSS*****************************YDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEE*********TLTCGYSICWNKSGLHEVILGTT****************QSSLCKNRLLQVFLSLKHESKIRCLAADISYRELKVVLIFWI
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDTECWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTGKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGIYDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETASSTLTCGYSICWNKSGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKNRLLQVFLSLKHESKIRCLAADISYRELKVVLIFWI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	373	2.2.26 [Sep-21-2011]
Q9V3R6	394	tRNA-specific adenosine d	yes	no	0.831	0.786	0.338	7e-35
P51400	711	Double-stranded RNA-speci	yes	no	0.782	0.410	0.311	9e-33
Q91ZS8	711	Double-stranded RNA-speci	yes	no	0.782	0.410	0.308	2e-32
Q9NS39	739	Double-stranded RNA-speci	no	no	0.758	0.382	0.326	1e-31
P78563	741	Double-stranded RNA-speci	no	no	0.806	0.406	0.304	4e-31
Q9JI20	745	Double-stranded RNA-speci	no	no	0.758	0.379	0.310	4e-28
P55265	1226	Double-stranded RNA-speci	no	no	0.664	0.202	0.306	2e-27
P97616	746	Double-stranded RNA-speci	no	no	0.766	0.383	0.313	3e-27
Q9NII1	676	Double-stranded RNA-speci	no	no	0.750	0.414	0.287	3e-27
Q99MU3	1178	Double-stranded RNA-speci	no	no	0.670	0.212	0.305	4e-27

>sp|Q9V3R6|ADAT1_DROME tRNA-specific adenosine deaminase 1 OS=Drosophila melanogaster GN=adat PE=2 SV=1

 Score =  148 bits (373), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 118/349 (33%), Positives = 174/349 (49%), Gaps = 39/349 (11%)

Query: 9   EVSKKVLWQYKSLPKKGKPQGREVTVLAAFL-ISSPSKDLEVVALGTGTKCIGRSLLSPH 67
           E+++  L +++SLPK GKP   + T+LA  +  +  ++  ++V+LG GTKCIG S L P+
Sbjct: 11  EIAELCLKKFESLPKTGKPTANQWTILAGIVEFNRNTEACQLVSLGCGTKCIGESKLCPN 70

Query: 68  GDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVF--NNFLFELGPTGKYRF 125
           G I+NDSHAE++ARR  LRF Y E+  KQ          D +F  N+ L        Y  
Sbjct: 71  GLILNDSHAEVLARRGFLRFLYQEL--KQ----------DRIFHWNSTL------STYDM 112

Query: 126 REGWQLHLYISQLPCGDAS-LSSCHSAPRNFFSREGNSLSSVDELNGFKDGIYDS--LQH 182
            E  + H   +Q PCGDA  L     A R    R       V         + D   LQ 
Sbjct: 113 DEHVEFHFLSTQTPCGDACILEEEQPAARAKRQRLDEDSEMVYTGAKLISDLSDDPMLQT 172

Query: 183 IGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFL-QPVYLSSITVGRSPNTSED 241
            G ++ KPGRG+ TLS+SCSDKIARWN +GVQGALL   + +P+Y SS+      N   D
Sbjct: 173 PGALRTKPGRGERTLSMSCSDKIARWNVIGVQGALLDVLISKPIYFSSL------NFCCD 226

Query: 242 FPLEEHLKRSLYDRILPLSEELSSPFQVNKP-IFLAASVPPEEFQHSETASSTLTCGYSI 300
               E L+R+++ R    + +  + FQ  +P I +   +  E  Q S+   S       +
Sbjct: 227 DAQLESLERAIFKRFDCRTFK-HTRFQPQRPQINIDPGIRFEFSQRSDWQPSP----NGL 281

Query: 301 CWNK--SGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKNRLLQVFLSL 347
            W++    L    +   G++QG + K   +     ++ K +L   FL L
Sbjct: 282 IWSQVPEELRPYEISVNGKRQGVTKKKMKTSQAALAISKYKLFLTFLEL 330

Specifically deaminates adenosine-37 to inosine in tRNA-Ala.
Drosophila melanogaster (taxid: 7227)
EC: 3EC: .EC: 5EC: .EC: 4EC: .EC: -

>sp|P51400|RED1_RAT Double-stranded RNA-specific editase 1 OS=Rattus norvegicus GN=Adarb1 PE=1 SV=1

 Score =  141 bits (355), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 104/334 (31%), Positives = 164/334 (49%), Gaps = 42/334 (12%)

Query: 4   ECWGDEVSKKVLWQYKSLPKK-GKPQGREVTVLAAFLISSPS--KDLEVVALGTGTKCIG 60
           +   D VS+ VL ++  L      P  R   VL+  ++++ +  KD +V+++ TGTKCI 
Sbjct: 321 QVLADAVSRLVLGKFSDLTDNFSSPHARR-KVLSGVVMTTGTDVKDAKVISVSTGTKCIN 379

Query: 61  RSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPT 120
              +S  G  +ND HAEI++RR+LLRF Y ++   +   N  E  +  +     F+    
Sbjct: 380 GEYMSDRGLALNDCHAEIISRRSLLRFLYAQL---ELYLNNKEDQKKSI-----FQKSER 431

Query: 121 GKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGIYDSL 180
           G +R ++  Q HLYIS  PCGDA + S H       + + + L+   + +  +       
Sbjct: 432 GGFRLKDTVQFHLYISTSPCGDARIFSPHEPVLEGMAPDSHQLTEPADRHPNRKARGQLR 491

Query: 181 QHI------------GRVQRKPG--RGDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVY 226
             I              +Q   G  +G+  L++SCSDKIARWN VG+QGALLS F++P+Y
Sbjct: 492 TKIESGEGTIPVRSNASIQTWDGVLQGERLLTMSCSDKIARWNVVGIQGALLSIFVEPIY 551

Query: 227 LSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQH 286
            SSI +G            +HL R++Y RI  + E+L   + +NKP+    S       +
Sbjct: 552 FSSIILG-------SLYHGDHLSRAMYQRISNI-EDLPPLYTLNKPLLSGIS-------N 596

Query: 287 SETASSTLTCGYSICWNKSGLH-EVILGTTGRKQ 319
           +E         +S+ W       EVI  TTG+ +
Sbjct: 597 AEARQPGKAPNFSVNWTVGDTAIEVINATTGKDE 630

Editing of the messenger RNAs for glutamate receptor (GluR) subunits by site-selective adenosine deamination. Edits both the GluR-B Q/R and R/G sites efficiently but converts the adenosine in hotspot1 much less efficiently.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 5

EC: .

EC: -

EC: .

EC: -

>sp|Q91ZS8|RED1_MOUSE Double-stranded RNA-specific editase 1 OS=Mus musculus GN=Adarb1 PE=1 SV=1

 Score =  140 bits (352), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 164/334 (49%), Gaps = 42/334 (12%)

Query: 4   ECWGDEVSKKVLWQYKSLPKK-GKPQGREVTVLAAFLISSPS--KDLEVVALGTGTKCIG 60
           +   D VS+ VL ++  L      P  R   VL+  ++++ +  KD +V+++ TGTKCI 
Sbjct: 321 QVLADAVSRLVLGKFSDLTDNFSSPHARR-KVLSGVVMTTGTDVKDAKVISVSTGTKCIN 379

Query: 61  RSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPT 120
              +S  G  +ND HAEI++RR+LLRF Y ++   +   N  E  +  +     F+    
Sbjct: 380 GEYMSDRGLALNDCHAEIISRRSLLRFLYAQL---ELYLNNKEDQKKSI-----FQKSER 431

Query: 121 GKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGIYDSL 180
           G +R ++  Q HLYIS  PCGDA + S H       + + + L+   + +  +       
Sbjct: 432 GGFRLKDTVQFHLYISTSPCGDARIFSPHEPVLEGMTPDSHQLTEPADRHPNRKARGQLR 491

Query: 181 QHI------------GRVQRKPG--RGDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVY 226
             I              +Q   G  +G+  L++SCSDKIARWN VG+QG+LLS F++P+Y
Sbjct: 492 TKIESGEGTIPVRSNASIQTWDGVLQGERLLTMSCSDKIARWNVVGIQGSLLSIFVEPIY 551

Query: 227 LSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQH 286
            SSI +G            +HL R++Y RI  + E+L   + +NKP+    S       +
Sbjct: 552 FSSIILG-------SLYHGDHLSRAMYQRISNI-EDLPPLYTLNKPLLSGIS-------N 596

Query: 287 SETASSTLTCGYSICWN-KSGLHEVILGTTGRKQ 319
           +E         +S+ W       EVI  TTG+ +
Sbjct: 597 AEARQPGKAPNFSVNWTVGDATIEVINATTGKDE 630

Editing of the messenger RNAs for glutamate receptor (GluR) subunits by site-selective adenosine deamination. Edits both the GluR-B Q/R and R/G sites efficiently but converts the adenosine in hotspot1 much less efficiently.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 5

EC: .

EC: -

EC: .

EC: -

>sp|Q9NS39|RED2_HUMAN Double-stranded RNA-specific editase B2 OS=Homo sapiens GN=ADARB2 PE=1 SV=1

 Score =  137 bits (345), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/328 (32%), Positives = 161/328 (49%), Gaps = 45/328 (13%)

Query: 6   WGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISS--PSKDLEVVALGTGTKCIGRSL 63
           + D +S+ V  +++ +     P       LA  +++    ++  +VVAL +GTKCI    
Sbjct: 361 FADSISQLVTQKFREVTTDLTPMHARHKALAGIVMTKGLDARQAQVVALSSGTKCISGEH 420

Query: 64  LSPHGDIVNDSHAEIVARRALLRFFYTEV---LNKQKCSNGIEGLRDDVFNNFLFELGPT 120
           LS  G +VND HAE+VARRA L F YT++   L+K+         R+D   +    L   
Sbjct: 421 LSDQGLVVNDCHAEVVARRAFLHFLYTQLELHLSKR---------REDSERSIFVRLK-E 470

Query: 121 GKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGIYDSL 180
           G YR RE    HLY+S  PCGDA L S +    +  S    S   V +  G      +S 
Sbjct: 471 GGYRLRENILFHLYVSTSPCGDARLHSPYEITTDLHS----SKHLVRKFRGHLRTKIESG 526

Query: 181 QHIGRVQRKPGR---------GDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSIT 231
           +    V R P           G+  +++SC+DKIARWN +G+QGALLS+F++PVYL SI 
Sbjct: 527 EGTVPV-RGPSAVQTWDGVLLGEQLITMSCTDKIARWNVLGLQGALLSHFVEPVYLQSIV 585

Query: 232 VGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETAS 291
           VG   +T        HL R +  R+  +  +L + ++ N+P+    S        +E   
Sbjct: 586 VGSLHHTG-------HLARVMSHRMEGVG-QLPASYRHNRPLLSGVS-------DAEARQ 630

Query: 292 STLTCGYSICW-NKSGLHEVILGTTGRK 318
              +  +S+ W   S   E+I  TTGR+
Sbjct: 631 PGKSPPFSMNWVVGSADLEIINATTGRR 658

Does not act on glutamate receptor or on serotonin receptor subtype 2C. Capable of binding to dsRNA but also to ssRNA.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 5

EC: .

EC: -

EC: .

EC: -

>sp|P78563|RED1_HUMAN Double-stranded RNA-specific editase 1 OS=Homo sapiens GN=ADARB1 PE=1 SV=1

 Score =  135 bits (341), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 174/388 (44%), Gaps = 87/388 (22%)

Query: 4   ECWGDEVSKKVLWQYKSLPKK-GKPQGREVTVLAAFLISSPS--KDLEVVALGTGTKCIG 60
           +   D VS+ VL ++  L      P  R   VLA  ++++ +  KD +V+++ TGTKCI 
Sbjct: 321 QVLADAVSRLVLGKFGDLTDNFSSPHARR-KVLAGVVMTTGTDVKDAKVISVSTGTKCIN 379

Query: 61  RSLLSPHGDIVNDSHAEIVARRALLRFFYTEV---LNKQKCSNGIEGLRDDVFNNFLFEL 117
              +S  G  +ND HAEI++RR+LLRF YT++   LN +           D     +F+ 
Sbjct: 380 GEYMSDRGLALNDCHAEIISRRSLLRFLYTQLELYLNNK-----------DDQKRSIFQK 428

Query: 118 GPTGKYRFREGWQLHLYISQLPCGDASLSSCHSA---PRNFFSREGNSLSSVDELNGFKD 174
              G +R +E  Q HLYIS  PCGDA + S H         +++ G    +   L     
Sbjct: 429 SERGGFRLKENVQFHLYISTSPCGDARIFSPHEPILEGSRSYTQAGVQWCNHGSLQPRPP 488

Query: 175 GIY-----DSLQHIGRVQ---RKPGR------------GDTTLSV--------------- 199
           G+       + Q  G  +   R P R            G+ T+ V               
Sbjct: 489 GLLSDPSTSTFQGAGTTEPADRHPNRKARGQLRTKIESGEGTIPVRSNASIQTWDGVLQG 548

Query: 200 ------SCSDKIARWNAVGVQGALLSYFLQPVYLSSITVGRSPNTSEDFPLEEHLKRSLY 253
                 SCSDKIARWN VG+QG+LLS F++P+Y SSI +G            +HL R++Y
Sbjct: 549 ERLLTMSCSDKIARWNVVGIQGSLLSIFVEPIYFSSIILG-------SLYHGDHLSRAMY 601

Query: 254 DRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETASSTLTCGYSICWN-KSGLHEVIL 312
            RI  + E+L   + +NKP+    S       ++E         +S+ W       EVI 
Sbjct: 602 QRISNI-EDLPPLYTLNKPLLSGIS-------NAEARQPGKAPNFSVNWTVGDSAIEVIN 653

Query: 313 GTTGRKQGTSAKGALSPSTQSSLCKNRL 340
            TTG+ +   A         S LCK+ L
Sbjct: 654 ATTGKDELGRA---------SRLCKHAL 672

Editing of the messenger RNAs for glutamate receptor (GluR) subunits by site-selective adenosine deamination. Edits both the GluR-B Q/R and R/G sites efficiently but converts the adenosine in hotspot1 much less efficiently.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 5

EC: .

EC: -

EC: .

EC: -

>sp|Q9JI20|RED2_MOUSE Double-stranded RNA-specific editase B2 OS=Mus musculus GN=Adarb2 PE=2 SV=2

 Score =  125 bits (315), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 102/328 (31%), Positives = 157/328 (47%), Gaps = 45/328 (13%)

Query: 6   WGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISS--PSKDLEVVALGTGTKCIGRSL 63
           + D VS+ V  +++ L             LA  +++    +K  +V+ L +GTKCI    
Sbjct: 367 FADSVSQLVTQKFRELTVGLTSVYARHKTLAGIVMTKGLDTKQAQVIVLSSGTKCISGEH 426

Query: 64  LSPHGDIVNDSHAEIVARRALLRFFYTEV---LNKQKCSNGIEGLRDDVFNNFLFELGPT 120
           +S  G +VND HAEIVARRA L F Y+++   L+K +         +D   +    L   
Sbjct: 427 ISDQGLVVNDCHAEIVARRAFLHFLYSQLELHLSKHQ---------EDPERSIFIRL-KE 476

Query: 121 GKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGIYDSL 180
           G YR RE    HLY+S  PCGDA ++S    P    +   +S   V +  G      +S 
Sbjct: 477 GGYRLRENILFHLYVSTSPCGDARVNS----PYEITTDLNSSKHIVRKFRGHLRTKIESG 532

Query: 181 QHIGRVQRKPGR---------GDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSIT 231
           +    V R P           G+  +++SC+DKIA WN +G+QGALL +F++PVYL SI 
Sbjct: 533 EGTVPV-RGPSAVQTWDGILLGEQLITMSCTDKIASWNVLGLQGALLCHFIEPVYLHSII 591

Query: 232 VGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETAS 291
           VG   +T        HL R +  R+  +  +L + ++ N+P+    S       H+E   
Sbjct: 592 VGSLHHTG-------HLARVMSHRMEGIG-QLPASYRQNRPLLSGVS-------HAEARQ 636

Query: 292 STLTCGYSICW-NKSGLHEVILGTTGRK 318
              +  +S  W   S   E+I  TTG++
Sbjct: 637 PGKSPHFSANWVVGSADLEIINATTGKR 664

Does not act on glutamate receptor or on serotonin receptor subtype 2C. Capable of binding to dsRNA but also to ssRNA.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 5

EC: .

EC: -

EC: .

EC: -

>sp|P55265|DSRAD_HUMAN Double-stranded RNA-specific adenosine deaminase OS=Homo sapiens GN=ADAR PE=1 SV=4

 Score =  124 bits (310), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 149/320 (46%), Gaps = 72/320 (22%)

Query: 34   VLAAFLISSPSKDLEVV-ALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEV 92
            +LAA ++   S+D+ VV +LGTG +C+    LS  G+ VND HAEI++RR  +RF Y+E+
Sbjct: 868  ILAAIIMKKDSEDMGVVVSLGTGNRCVKGDSLSLKGETVNDCHAEIISRRGFIRFLYSEL 927

Query: 93   L--NKQKCSNGIEGLRDDVFNNFLFELGPTG-KYRFREGWQLHLYISQLPCGDASLSSCH 149
            +  N Q   + I            FE    G K + ++    HLYIS  PCGD +L    
Sbjct: 928  MKYNSQTAKDSI------------FEPAKGGEKLQIKKTVSFHLYISTAPCGDGALFDKS 975

Query: 150  SAPRNFFSREGNSLSSVDELNGFKDGIYDSLQHIGRVQRKPGRGDTTLSV---------- 199
             + R   S E                ++++ +  G+++ K   G+ T+ V          
Sbjct: 976  CSDRAMESTESRHYP-----------VFENPKQ-GKLRTKVENGEGTIPVESSDIVPTWD 1023

Query: 200  -----------SCSDKIARWNAVGVQGALLSYFLQPVYLSSITVGRSPNTSEDFPLEEHL 248
                       SCSDKI RWN +G+QGALL++FLQP+YL S+T+G           + HL
Sbjct: 1024 GIRLGERLRTMSCSDKILRWNVLGLQGALLTHFLQPIYLKSVTLGY-------LFSQGHL 1076

Query: 249  KRSLYDRIL----PLSEELSSPFQVNKPIFLAASVPPEEFQHSETASST----LTCGYSI 300
             R++  R+        + L  PF VN P     S+   + Q  +T  ++    L  GY +
Sbjct: 1077 TRAICCRVTRDGSAFEDGLRHPFIVNHPKVGRVSIYDSKRQSGKTKETSVNWCLADGYDL 1136

Query: 301  CWNKSGLHEVILGTTGRKQG 320
                    E++ GT G   G
Sbjct: 1137 --------EILDGTRGTVDG 1148

Converts multiple adenosines to inosines and creates I/U mismatched base pairs in double-helical RNA substrates without apparent sequence specificity. Has been found to modify more frequently adenosines in AU-rich regions, probably due to the relative ease of melting A/U base pairs as compared to G/C pairs. Functions to modify viral RNA genomes and may be responsible for hypermutation of certain negative-stranded viruses. Edits the messenger RNAs for glutamate receptor (GLUR) subunits by site-selective adenosine deamination. Produces low-level editing at the GLUR-B Q/R site, but edits efficiently at the R/G site and HOTSPOT1. Binds to short interfering RNAs (siRNA) without editing them and suppresses siRNA-mediated RNA interference. Binds to ILF3/NF90 and up-regulates ILF3-mediated gene expression.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 5

EC: .

EC: 4

EC: .

EC: -

>sp|P97616|RED2_RAT Double-stranded RNA-specific editase B2 OS=Rattus norvegicus GN=Adarb2 PE=2 SV=1

 Score =  122 bits (307), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 153/325 (47%), Gaps = 39/325 (12%)

Query: 6   WGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISS--PSKDLEVVALGTGTKCIGRSL 63
           + D VS+ V  +++ L             LA  +++    +K  +V+ L +GTKCI    
Sbjct: 368 FADSVSQLVTQKFRELTVGLTSVYARHKTLAGIVMTKGLDTKQAQVIVLSSGTKCISGEH 427

Query: 64  LSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTGKY 123
           +S  G +VND HAEIVARRA L F YT++  +   S   E     +F          G Y
Sbjct: 428 ISDQGLVVNDCHAEIVARRAFLHFLYTQL--ELHLSKHQEDPERSIFIRV-----KEGGY 480

Query: 124 RFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGIYDSLQHI 183
           R RE    HLY+S  PCGDA L+S    P        +S   V +  G      +S +  
Sbjct: 481 RLRENILFHLYVSTSPCGDARLNS----PYEITIDLNSSKHIVRKFRGHLRTKIESGEGT 536

Query: 184 GRVQRKPGR---------GDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSITVGR 234
             V R P           G+  +++SC+DKIA WN +G+QGALL +F++PVYL SI VG 
Sbjct: 537 VPV-RGPSAVQTWDGILLGEQLVTMSCTDKIASWNVLGLQGALLCHFIEPVYLHSIIVGS 595

Query: 235 SPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETASSTL 294
             +T        HL R +  R+  +  +L + ++ N+P+    S       ++E      
Sbjct: 596 LHHTG-------HLARVMSHRMEGIG-QLPASYRQNRPLLSGVS-------NAEARQPGK 640

Query: 295 TCGYSICW-NKSGLHEVILGTTGRK 318
           +  +S  W   S   E+I  TTG++
Sbjct: 641 SPHFSANWVVGSADLEIINATTGKR 665

Does not act on glutamate receptor or on serotonin receptor subtype 2C. Capable of binding to dsRNA but also to ssRNA.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 5

EC: .

EC: -

EC: .

EC: -

>sp|Q9NII1|ADAR_DROME Double-stranded RNA-specific editase Adar OS=Drosophila melanogaster GN=Adar PE=1 SV=2

 Score =  122 bits (307), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 153/337 (45%), Gaps = 57/337 (16%)

Query: 4   ECWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSK--DLEVVALGTGTKCIGR 61
           +   D + + VL ++  + K  +   R   VLA  +++      + +V+++ TGTKC+  
Sbjct: 300 QIHADTIGRLVLEKFMEVIKGQEAYSRR-KVLAGIVMTENMNFCEAKVISVSTGTKCVSG 358

Query: 62  SLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTG 121
             +S +G ++NDSHAEIV+RR LL++ Y ++  +   +   + +       F+       
Sbjct: 359 EHMSVNGAVLNDSHAEIVSRRCLLKYLYAQLDLQCNQATAYQSI-------FVRNTDGQY 411

Query: 122 KYRFREGWQLHLYISQLPCGDASLSSCHSAPR------NFFSR--------EGNSLSSVD 167
            Y+ + G   HLYI+  PCGDA + S H          N  +R         G     V 
Sbjct: 412 PYKLKSGVHFHLYINTAPCGDARIFSPHENDTGVDKHPNRKARGQLRTKIESGEGTIPVK 471

Query: 168 ELNGFK--DGIYDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFLQPV 225
             +G +  DG+               +G   L++SCSDKIARWN VG+QG+LLS  ++PV
Sbjct: 472 SSDGIQTWDGVL--------------QGQRLLTMSCSDKIARWNIVGIQGSLLSSIIEPV 517

Query: 226 YLSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKP-IFLAASVPPEEF 284
           YL SI +G            EH+ R++  RI    + L  P+ +NKP + L  S  P   
Sbjct: 518 YLHSIVLG-------SLLHPEHMYRAVCGRIEKSIQGLPPPYHLNKPRLALVTSAEPR-- 568

Query: 285 QHSETASSTLTCGYSICWNKSGLH-EVILGTTGRKQG 320
                 +      + I W       EV+   TGR  G
Sbjct: 569 ------NQAKAPNFGINWTIGDTELEVVNSLTGRTIG 599

Has A-to-I RNA editing activity on extended dsRNA: edits RNA-binding protein Rnp4F. A-to-I editing of pre-mRNAs acts predominantly through nervous system targets to affect adult nervous system integrity, function and behavior. Essential for adaptation to environmental stresses, such as oxygen deprivation, and for the prevention of premature neuronal degeneration, through the editing of ion channels as targets.

Drosophila melanogaster (taxid: 7227)

EC: 3

EC: .

EC: 5

EC: .

EC: -

EC: .

EC: -

>sp|Q99MU3|DSRAD_MOUSE Double-stranded RNA-specific adenosine deaminase OS=Mus musculus GN=Adar PE=1 SV=2

 Score =  122 bits (306), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 147/318 (46%), Gaps = 68/318 (21%)

Query: 34   VLAAFLISSPSKDLEVV-ALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEV 92
            +LAA ++    +D+ VV +LGTG +C+    LS  G+ VND HAEI++RR  +RF Y+E+
Sbjct: 817  ILAAIIMKRDPEDMGVVVSLGTGNRCVKGDSLSLKGETVNDCHAEIISRRGFIRFLYSEL 876

Query: 93   LNKQKCSNGIEGLRDDVFNNFLFELGPTG-KYRFREGWQLHLYISQLPCGDASLSSCHSA 151
            +                  N +FEL   G K + ++    HLYIS  PCGD +L     +
Sbjct: 877  MK----------YNHHTAKNSIFELARGGEKLQIKKTVSFHLYISTAPCGDGALFDKSCS 926

Query: 152  PRNFFSREGNSLSSVDELNGFKDGIYDSLQHIGRVQRKPGRGDTTLSV------------ 199
             R   S E                ++++ +  G+++ K   G+ T+ V            
Sbjct: 927  DRAVESTESRHYP-----------VFENPKQ-GKLRTKVENGEGTIPVESSDIVPTWDGI 974

Query: 200  ---------SCSDKIARWNAVGVQGALLSYFLQPVYLSSITVGRSPNTSEDFPLEEHLKR 250
                     SCSDKI RWN +G+QGALL++FLQPVYL S+T+G           + HL R
Sbjct: 975  RLGERLRTMSCSDKILRWNVLGLQGALLTHFLQPVYLKSVTLGY-------LFSQGHLTR 1027

Query: 251  SLYDRIL----PLSEELSSPFQVNKPIFLAASVPPEEFQHSETASST----LTCGYSICW 302
            ++  R+        + L  PF VN P     SV   + Q  +T  ++    +  GY +  
Sbjct: 1028 AICCRVTRDGKAFEDGLRYPFIVNHPKVGRVSVYDSKRQSGKTKETSVNWCMADGYDL-- 1085

Query: 303  NKSGLHEVILGTTGRKQG 320
                  E++ GT G   G
Sbjct: 1086 ------EILDGTRGTVDG 1097

Converts multiple adenosines to inosines and creates I/U mismatched base pairs in double-helical RNA substrates without apparent sequence specificity. Has been found to modify more frequently adenosines in AU-rich regions, probably due to the relative ease of melting A/U base pairs as compared to G/C pairs. Functions to modify viral RNA genomes and may be responsible for hypermutation of certain negative-stranded viruses (By similarity). Binds to short interfering RNAs (siRNA) without editing them and suppresses siRNA-mediated RNA interference. Binds to ILF3/NF90 and up-regulates ILF3-mediated gene expression.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 5

EC: .

EC: 4

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	373
225454148	453	PREDICTED: tRNA-specific adenosine deami	0.981	0.807	0.632	1e-134
224127616	380	predicted protein [Populus trichocarpa]	0.887	0.871	0.675	1e-128
255541540	443	protein with unknown function [Ricinus c	0.981	0.826	0.628	1e-124
356506269	407	PREDICTED: tRNA-specific adenosine deami	0.938	0.859	0.635	1e-120
357497385	413	Double-stranded RNA-specific adenosine d	0.941	0.849	0.606	1e-119
449441482	406	PREDICTED: tRNA-specific adenosine deami	0.943	0.866	0.616	1e-118
297842944	399	predicted protein [Arabidopsis lyrata su	0.991	0.927	0.574	1e-114
186478036	420	Adenosine-deaminase (editase) domain-con	0.970	0.861	0.593	1e-114
356522634	384	PREDICTED: tRNA-specific adenosine deami	0.898	0.872	0.624	1e-111
8671846	435	Contains similarity to RNA adenosine dea	0.989	0.848	0.545	1e-110

>gi|225454148|ref|XP_002273023.1| PREDICTED: tRNA-specific adenosine deaminase 1 [Vitis vinifera] gi|297745247|emb|CBI40327.3| unnamed protein product [Vitis vinifera]

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 255/403 (63%), Positives = 299/403 (74%), Gaps = 37/403 (9%)

Query: 1   MDTE-CWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCI 59
           +D+E  WG++VS+KVL  YKSLPKKGKPQGREVTVLAAFL SSPS+DLEVVALGTGTKCI
Sbjct: 15  LDSEKTWGEQVSEKVLSVYKSLPKKGKPQGREVTVLAAFLTSSPSQDLEVVALGTGTKCI 74

Query: 60  GRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVL------NKQKCSNGIEGLRDDVFNNF 113
           GRS LSPHGDIVNDSHAE++ARRAL+RFFYTE+       N+   + G E L  D   N 
Sbjct: 75  GRSRLSPHGDIVNDSHAEVIARRALMRFFYTEIQSLLTISNRHTHNYGSEQLEGDDITNM 134

Query: 114 LFELGPTG----KYRFREGWQLHLYISQLPCGDASLSSCHSAPRNF-------------- 155
           LF L   G    K   R GW+LHLYISQLPCGDASLS    + R+F              
Sbjct: 135 LFHLDSDGPGQRKITMRAGWKLHLYISQLPCGDASLSLPLFSLRSFALINGDLPSSVSEN 194

Query: 156 --FSREGNSLSSVDELNG-FKDGIY---------DSLQHIGRVQRKPGRGDTTLSVSCSD 203
                + +SLS++D+  G F D            +  Q IG +QRKPGRGDTTLSVSCSD
Sbjct: 195 DSMDEQTDSLSNLDDFTGDFLDASMKNNVGSFSGNGSQIIGMIQRKPGRGDTTLSVSCSD 254

Query: 204 KIARWNAVGVQGALLSYFLQPVYLSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEEL 263
           KIARWN +GVQGALLSYFLQPVYLSSITVG S  + + FPLE++L+R+LY+R LPLS++L
Sbjct: 255 KIARWNVLGVQGALLSYFLQPVYLSSITVGESHTSPKIFPLEDNLRRALYNRALPLSDKL 314

Query: 264 SSPFQVNKPIFLAASVPPEEFQHSETASSTLTCGYSICWNKSGLHEVILGTTGRKQGTSA 323
            SPFQVN+P+F  A +PP+EFQHSETA++TLTCGYSICWNKSGLHEVILGTTGRKQGTSA
Sbjct: 315 KSPFQVNQPLFWKAPIPPKEFQHSETATTTLTCGYSICWNKSGLHEVILGTTGRKQGTSA 374

Query: 324 KGALSPSTQSSLCKNRLLQVFLSLKHESKIRCLAADISYRELK 366
           KGAL  ST+ SLCK RLL+VFL L H++ I   A ++SYRELK
Sbjct: 375 KGALYASTEPSLCKKRLLEVFLLLMHKTSIESPANEVSYRELK 417

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127616|ref|XP_002320118.1| predicted protein [Populus trichocarpa] gi|222860891|gb|EEE98433.1| predicted protein [Populus trichocarpa]

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 242/358 (67%), Positives = 286/358 (79%), Gaps = 27/358 (7%)

Query: 18  YKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAE 77
           YKSLPKKGKPQG EVTVLA+FL+SSPS++LEVVALGTGTKC+GRSLLS  GDI+NDSHAE
Sbjct: 4   YKSLPKKGKPQGCEVTVLASFLLSSPSQELEVVALGTGTKCVGRSLLSNRGDILNDSHAE 63

Query: 78  IVARRALLRFF--YTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTG----KYRFREGWQL 131
           I+ARRAL+RF   + E++ + K ++G         +N++FEL   G    K++ REGWQL
Sbjct: 64  IIARRALIRFITIFGELM-QVKINDG---------SNWIFELEQRGCSEEKFKLREGWQL 113

Query: 132 HLYISQLPCGDASLSSCHSAPRNFFSREGN---SLSSVDELNGFKDGIYDSLQHIGRVQR 188
           HLYISQLPCGDAS+SS  S  RN F+REG+   SLS     NG         Q  G VQR
Sbjct: 114 HLYISQLPCGDASVSSLLSPARNVFTREGDLPPSLSGRLSTNGS--------QISGMVQR 165

Query: 189 KPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSITVGRSPNTSEDFPLEEHL 248
           KPGRGDTTLSVSCSDKIARWN VGVQGALLSYFLQPVYLSS+TVG+S N+ ++F LE+HL
Sbjct: 166 KPGRGDTTLSVSCSDKIARWNVVGVQGALLSYFLQPVYLSSVTVGQSSNSPKNFCLEDHL 225

Query: 249 KRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETASSTLTCGYSICWNKSGLH 308
           KR+L+DRILPLS EL SPF ++KP+F AA  PP EF+H++TA  TLTCGYSICW+KSG+H
Sbjct: 226 KRALHDRILPLSNELVSPFHLDKPLFYAAPEPPMEFKHADTALVTLTCGYSICWSKSGMH 285

Query: 309 EVILGTTGRKQGTSAKGALSPSTQSSLCKNRLLQVFLSLKHESKIRCLAADISYRELK 366
           EV+LGTTGRKQGTSAKGALSP+T SSLCK RLL+VFL+LK E + +C A DISYRELK
Sbjct: 286 EVVLGTTGRKQGTSAKGALSPATMSSLCKKRLLEVFLTLKQEFQSKCPAKDISYRELK 343

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255541540|ref|XP_002511834.1| protein with unknown function [Ricinus communis] gi|223549014|gb|EEF50503.1| protein with unknown function [Ricinus communis]

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 235/374 (62%), Positives = 287/374 (76%), Gaps = 8/374 (2%)

Query: 1   MDTECWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIG 60
           M++  WG++VS+KV+  Y SL KKGKPQGREVTVL++FLISSPS++LEV++LGTGTKC+G
Sbjct: 1   MESGSWGEKVSEKVISLYNSLQKKGKPQGREVTVLSSFLISSPSQELEVISLGTGTKCLG 60

Query: 61  RSLLSPHGDIVNDSHAEIVARRALLRFFYTEV--LNKQKCSNGIEGLRDDVFNNFLFEL- 117
           RS LSP GDIVNDSHAEI+ARRAL+RFFY+E+  L      +G E  + D   N LF+L 
Sbjct: 61  RSQLSPRGDIVNDSHAEIIARRALMRFFYSEIRRLTDTFNKHGREQFQSDDVGNCLFDLE 120

Query: 118 ---GPTGKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSR--EGNSLSSVDELNGF 172
                  K++ R GWQLHLYISQLPCGDAS+SS     RN F    +G   SS++ L   
Sbjct: 121 QDCSSQLKFKLRAGWQLHLYISQLPCGDASVSSPLLYMRNTFGTLPQGKLNSSMEVLEDS 180

Query: 173 KDGIYDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSITV 232
           +    +  +  G VQRKPGRGD TLSVSCSDKIARWN +GVQGALLSY LQP+YLSSITV
Sbjct: 181 EGNNAEGSEIGGSVQRKPGRGDATLSVSCSDKIARWNVLGVQGALLSYLLQPIYLSSITV 240

Query: 233 GRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETASS 292
           G+SPN+SE F LE  L+ SL DRILPLS +L +PFQVNKP+F +A VPP EFQH++TA +
Sbjct: 241 GQSPNSSEHFQLENCLQLSLCDRILPLSNKLIAPFQVNKPLFCSAPVPPREFQHADTALA 300

Query: 293 TLTCGYSICWNKSGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKNRLLQVFLSLKHESK 352
            LTCGYSICWNKSGLHEV+LGTTGR+QGTSAKGALSPST+S LCK ++L++FL L+ + +
Sbjct: 301 NLTCGYSICWNKSGLHEVVLGTTGRRQGTSAKGALSPSTRSFLCKKQVLEMFLILREDMQ 360

Query: 353 IRCLAADISYRELK 366
                 +ISYRELK
Sbjct: 361 HEDRDKEISYRELK 374

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356506269|ref|XP_003521909.1| PREDICTED: tRNA-specific adenosine deaminase 1-like [Glycine max]

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 235/370 (63%), Positives = 280/370 (75%), Gaps = 20/370 (5%)

Query: 6   WGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSLLS 65
           WG  VS+KVL  Y SLPKKGKPQGREVTVLA+FL+SSPS DL+VVA+GTGTKC+GRSLL 
Sbjct: 13  WGKRVSEKVLSFYTSLPKKGKPQGREVTVLASFLLSSPSNDLKVVAMGTGTKCLGRSLLR 72

Query: 66  PHGDIVNDSHAEIVARRALLRFFYTEVLN----KQKCSNGIEGLRDDVFNNFLFELGP-- 119
             GD+V+DSHAE++ARRAL+RFFYT++ +    K   SNG +  + D  N+  FEL P  
Sbjct: 73  TCGDVVHDSHAEVIARRALIRFFYTQIQHLTGSKHAPSNGGKRFKLDDGNS-PFELDPGC 131

Query: 120 --TGKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGIY 177
              GKY  ++ W+LH+YISQLPCGDASLS   S        E +S S +           
Sbjct: 132 LNKGKYSLKKDWKLHMYISQLPCGDASLSWQVSPLETAVLGESDSTSPLG---------- 181

Query: 178 DSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQG-ALLSYFLQPVYLSSITVGRSP 236
           + L+  G VQRKP RGDTTLSVSCSDKIARW+  GVQG ALLSYFLQPVYLSSITVG   
Sbjct: 182 NGLKQKGMVQRKPSRGDTTLSVSCSDKIARWSVAGVQGVALLSYFLQPVYLSSITVGLPL 241

Query: 237 NTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETASSTLTC 296
           +  E+F LE+ LKR+LY+R+LPLS EL+SPF VN+PIF AA VPP++FQ SE+A++TLTC
Sbjct: 242 DILENFRLEDSLKRALYERMLPLSNELTSPFLVNQPIFHAAPVPPKDFQQSESAANTLTC 301

Query: 297 GYSICWNKSGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKNRLLQVFLSLKHESKIRCL 356
           GYSICWN+ GLH+VI+GTTGRKQGTSAKGAL PSTQSSLCK RLL+VFLSL  E+ I  L
Sbjct: 302 GYSICWNECGLHDVIMGTTGRKQGTSAKGALYPSTQSSLCKKRLLEVFLSLGPENLIGSL 361

Query: 357 AADISYRELK 366
              I+YRELK
Sbjct: 362 PNGITYRELK 371

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357497385|ref|XP_003618981.1| Double-stranded RNA-specific adenosine deaminase [Medicago truncatula] gi|355493996|gb|AES75199.1| Double-stranded RNA-specific adenosine deaminase [Medicago truncatula]

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 230/379 (60%), Positives = 275/379 (72%), Gaps = 28/379 (7%)

Query: 5   CWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSLL 64
           C    VS+KV+  Y SLPKKGKPQGREVTVLAAFL+SSPS +L+VVALGTGTKCIGRS+L
Sbjct: 10  CLDQSVSEKVISLYNSLPKKGKPQGREVTVLAAFLLSSPSNELKVVALGTGTKCIGRSML 69

Query: 65  SPHGDIVNDSHAEIVARRALLRFFYTEVL------NKQKCSNGIEGLRDDVFNNFLFELG 118
            P+GD+V+DSHAE++ARRAL+RFFYT++       +K   SNG +  + D  NN  FE+ 
Sbjct: 70  RPYGDVVHDSHAEVIARRALIRFFYTQIQRLSEPSSKSAPSNGAKRFKVDD-NNLAFEVD 128

Query: 119 P----TGKYRFREGWQLHLYISQLPC-------GDASLSSCHSAPRNFFSREGNSLSSVD 167
                  KY  R GW+LH+YISQLPC       GDASLSS  +   +    E        
Sbjct: 129 EGCLDKRKYTLRSGWKLHMYISQLPCNLIPHFRGDASLSSLVTPLESVPLGE-------- 180

Query: 168 ELNGFKDGIYDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYL 227
             NG      +S + IG VQRKPGRGDTTLSVSCSDKIARWN VG+QGALLSYFLQPVYL
Sbjct: 181 --NGPHSSSVNSSKQIGMVQRKPGRGDTTLSVSCSDKIARWNVVGIQGALLSYFLQPVYL 238

Query: 228 SSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHS 287
           SSITVG    + E+F  E++LKR+LYDRI+ L   L+SPF VN+P+F AA VPP +F  S
Sbjct: 239 SSITVGLPHTSPENFQFEDNLKRALYDRIVHLENALTSPFLVNQPLFQAAPVPPNDFLQS 298

Query: 288 ETASSTLTCGYSICWNKSGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKNRLLQVFLSL 347
           E++++ LTCGYSICWN+ GLHEV LGTTGRKQGTSAKGAL PST+SSLCK RLL+VFL L
Sbjct: 299 ESSANNLTCGYSICWNECGLHEVTLGTTGRKQGTSAKGALYPSTESSLCKKRLLEVFLPL 358

Query: 348 KHESKIRCLAADISYRELK 366
           + E   + L  DI+YRELK
Sbjct: 359 REEFLAKSLDDDITYRELK 377

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449441482|ref|XP_004138511.1| PREDICTED: tRNA-specific adenosine deaminase 1-like [Cucumis sativus] gi|449518611|ref|XP_004166330.1| PREDICTED: tRNA-specific adenosine deaminase 1-like [Cucumis sativus]

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 230/373 (61%), Positives = 278/373 (74%), Gaps = 21/373 (5%)

Query: 4   ECWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPS-KDLEVVALGTGTKCIGRS 62
           E WG+ +S+KVL  Y +LPKKGKPQGREVTVLAAFL+SSPS +DLEVVALGTGTKC+GRS
Sbjct: 9   ERWGETISEKVLSVYNTLPKKGKPQGREVTVLAAFLLSSPSPQDLEVVALGTGTKCLGRS 68

Query: 63  LLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIE-----GLRDDVFNNFLF-- 115
            LS +GD+VNDSHAE+VARRAL+RFFYT++ ++ + ++  E      +R D  NNFL   
Sbjct: 69  QLSSNGDVVNDSHAEVVARRALMRFFYTQIYHQSQSNSESEHHKTKKMRCDNVNNFLLQI 128

Query: 116 --ELGPTGKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFK 173
             E G   KY  R+ W+LHLYISQLPCGDAS     SA R+  +R  N    +     F 
Sbjct: 129 DEEAGAERKYVMRKCWKLHLYISQLPCGDAS----SSATRDVQARSDNVAPCL-----FD 179

Query: 174 DGIYDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSITVG 233
            G  D  Q IG VQRKPGRGDTTLSVSCSDKIARWN  G+QGALLSYFLQPV+LSSITVG
Sbjct: 180 KG--DDSQCIGSVQRKPGRGDTTLSVSCSDKIARWNVAGLQGALLSYFLQPVFLSSITVG 237

Query: 234 RSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETASST 293
            SP+ +++  +E  LK ++ DR+   S EL +P +VN+P+F  A +PP+EFQHSE+A +T
Sbjct: 238 LSPHNAKNCIVEGLLKSAVCDRVQLFSNELMNPLKVNQPLFCTAPIPPKEFQHSESALNT 297

Query: 294 LTCGYSICWNKSGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKNRLLQVFLSLKHESKI 353
           +TCGYSI WNKSGLHEVILGTTGRKQG SAKGA  PST+SSLCK RLL++F SLK E   
Sbjct: 298 ITCGYSIYWNKSGLHEVILGTTGRKQGASAKGAQYPSTESSLCKKRLLEMFWSLKSECTT 357

Query: 354 RCLAADISYRELK 366
           +  + DISYR LK
Sbjct: 358 KFPSTDISYRTLK 370

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297842944|ref|XP_002889353.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297335195|gb|EFH65612.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 224/390 (57%), Positives = 275/390 (70%), Gaps = 20/390 (5%)

Query: 4   ECWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSL 63
           E WG+ VS+KV+  Y SLPKKGKPQGREVTVL+AFL+SSPS+DL+V+ALGTGTKC+ RSL
Sbjct: 3   EDWGERVSEKVVSAYMSLPKKGKPQGREVTVLSAFLVSSPSQDLKVIALGTGTKCVSRSL 62

Query: 64  LSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNG---IEGLRDDVFNNFLFELGPT 120
           LSP GDIVNDSHAE+VARRAL+RFFY+E+   Q  S+     +  R D   + + E   +
Sbjct: 63  LSPRGDIVNDSHAEVVARRALIRFFYSEIQGMQLTSDKSSEAKRQRLDCETSSVLESADS 122

Query: 121 G-----KYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSRE------------GNSL 163
                 KY+ + G  LH+YISQLPCG AS SS   A +   S +            G+S 
Sbjct: 123 SCPGEVKYKLKSGCHLHMYISQLPCGYASTSSPFYALKKIPSTQVDDSFLVQASDIGSSR 182

Query: 164 SSVDELNGFKDGIYDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFLQ 223
            S     G      +  Q    VQRKPGRG+TTLSVSCSDKIARWN +GVQGALL   LQ
Sbjct: 183 HSDVPQIGSNSHTGNGSQVADMVQRKPGRGETTLSVSCSDKIARWNVLGVQGALLCQVLQ 242

Query: 224 PVYLSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEE 283
           PVY+S+ITVG+S +   +F L +HL+RSLY+RILPLS++L + F++NKP+F  A V P E
Sbjct: 243 PVYISTITVGQSLHIPGNFSLADHLRRSLYERILPLSDDLLTSFRLNKPLFFVAPVIPSE 302

Query: 284 FQHSETASSTLTCGYSICWNKSGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKNRLLQV 343
           FQHSETA +TLTCGYS+CWN SGLHEVILGTTGRKQGTSAKGAL PSTQSS+CK RLL++
Sbjct: 303 FQHSETAQATLTCGYSLCWNYSGLHEVILGTTGRKQGTSAKGALYPSTQSSICKQRLLEL 362

Query: 344 FLSLKHESKIRCLAADISYRELKVVLIFWI 373
           FL   H  +     +  SYRELKV ++  +
Sbjct: 363 FLKETHGHERESSKSKKSYRELKVRVMLIL 392

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|186478036|ref|NP_171681.3| Adenosine-deaminase (editase) domain-containing protein [Arabidopsis thaliana] gi|332189211|gb|AEE27332.1| Adenosine-deaminase (editase) domain-containing protein [Arabidopsis thaliana]

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 228/384 (59%), Positives = 274/384 (71%), Gaps = 22/384 (5%)

Query: 4   ECWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSL 63
           E WG  VS+KV+  Y SLPKKGKPQGREVTVL+AFL+SSPS+D +V+ALGTGTKC+  SL
Sbjct: 3   EDWGKTVSEKVISAYMSLPKKGKPQGREVTVLSAFLVSSPSQDPKVIALGTGTKCVSGSL 62

Query: 64  LSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCS---NGIEGLRDDVFNNFLFELGPT 120
           LSP GDIVNDSHAE+VARRAL+RFFY+E+   Q  S   N  +  R D   + + E   +
Sbjct: 63  LSPRGDIVNDSHAEVVARRALIRFFYSEIQRMQLTSGKSNEAKRQRIDSETSSILESADS 122

Query: 121 G-----KYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSRE-GNSL----------- 163
                 KY+ + G  LHLYISQLPCG AS SS   A +   S +  +SL           
Sbjct: 123 SCPGEVKYKLKSGCLLHLYISQLPCGYASTSSPLYALKKIPSTQVDDSLLVQASDICSSR 182

Query: 164 -SSVDELNGFKDGIYDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFL 222
            S V E+ G      +  Q    VQRKPGRG+TTLSVSCSDKIARWN +GVQGALL   L
Sbjct: 183 HSDVPEI-GSNSNKGNGSQVADMVQRKPGRGETTLSVSCSDKIARWNVLGVQGALLYQVL 241

Query: 223 QPVYLSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPE 282
           QPVY+S+ITVG+S ++ ++F L +HL+RSLY+RILPLS+EL + F++NKP+F  A VPP 
Sbjct: 242 QPVYISTITVGQSLHSPDNFSLADHLRRSLYERILPLSDELLTSFRLNKPLFFVAPVPPS 301

Query: 283 EFQHSETASSTLTCGYSICWNKSGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKNRLLQ 342
           EFQHSETA +TLTCGYS+CWN SGLHEVILGTTGRKQGTSAKGAL PSTQSS+CK RLL+
Sbjct: 302 EFQHSETAQATLTCGYSLCWNYSGLHEVILGTTGRKQGTSAKGALYPSTQSSICKQRLLE 361

Query: 343 VFLSLKHESKIRCLAADISYRELK 366
           +FL   H  K     +  SYRELK
Sbjct: 362 LFLKETHGHKRESSKSKKSYRELK 385

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356522634|ref|XP_003529951.1| PREDICTED: tRNA-specific adenosine deaminase 1-like [Glycine max]

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 226/362 (62%), Positives = 265/362 (73%), Gaps = 27/362 (7%)

Query: 6   WGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSLLS 65
           WG  VS+KVL  Y SLPKKGKPQGREVTVLAAFL+SSPS DL+VVA+GTGTKCIGRSLL 
Sbjct: 13  WGKRVSEKVLSFYASLPKKGKPQGREVTVLAAFLLSSPSNDLKVVAMGTGTKCIGRSLLR 72

Query: 66  PHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGP-TGKYR 124
             GD+V+DSHAE++ARRAL+RFFYT++ +  + S+               +  P  G  R
Sbjct: 73  TCGDVVHDSHAEVIARRALMRFFYTQIQHLTESSS---------------KHAPGNGGKR 117

Query: 125 FREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGIYDSLQHIG 184
           F+   + HL     P GDASLS   S        E +S S +D  NG K          G
Sbjct: 118 FKLD-EDHLPFEWDPGGDASLSFHVSPLETVVLGESDSTSPLD--NGSKQK--------G 166

Query: 185 RVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSITVGRSPNTSEDFPL 244
            VQRKPGRGDTTLSVSCSDKIARWN VGVQGALLSYFLQPVYLSSITVG   N  E+F L
Sbjct: 167 MVQRKPGRGDTTLSVSCSDKIARWNVVGVQGALLSYFLQPVYLSSITVGLPLNIPENFRL 226

Query: 245 EEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETASSTLTCGYSICWNK 304
           E++LKR+LY+RI PL  EL+SPF VN+PIF AA VPP++FQ SE+A++TLTCGYSI WN+
Sbjct: 227 EDNLKRALYERIPPLLNELTSPFLVNQPIFHAAPVPPKDFQQSESAANTLTCGYSIGWNE 286

Query: 305 SGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKNRLLQVFLSLKHESKIRCLAADISYRE 364
            GLH++I+GTTGRKQGTSAKGAL PSTQSSLCK RLL+VFLSL+ E+ I  L   I+YRE
Sbjct: 287 CGLHDIIMGTTGRKQGTSAKGALYPSTQSSLCKKRLLEVFLSLRPENLISSLPNGITYRE 346

Query: 365 LK 366
           LK
Sbjct: 347 LK 348

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|8671846|gb|AAF78409.1|AC009273_15 Contains similarity to RNA adenosine deaminase gene, exon 15 from Homo sapiens gb|U75503. It contains the adenosine-deaminase (editase) domain PF|02137 [Arabidopsis thaliana]

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 229/420 (54%), Positives = 277/420 (65%), Gaps = 51/420 (12%)

Query: 4   ECWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSL 63
           E WG  VS+KV+  Y SLPKKGKPQGREVTVL+AFL+SSPS+D +V+ALGTGTKC+  SL
Sbjct: 3   EDWGKTVSEKVISAYMSLPKKGKPQGREVTVLSAFLVSSPSQDPKVIALGTGTKCVSGSL 62

Query: 64  LSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCS---NGIEGLRDDVFNNFLFELGPT 120
           LSP GDIVNDSHAE+VARRAL+RFFY+E+   Q  S   N  +  R D   + + E   +
Sbjct: 63  LSPRGDIVNDSHAEVVARRALIRFFYSEIQRMQLTSGKSNEAKRQRIDSETSSILESADS 122

Query: 121 G-----KYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSRE-GNSL----------- 163
                 KY+ + G  LHLYISQLPCG AS SS   A +   S +  +SL           
Sbjct: 123 SCPGEVKYKLKSGCLLHLYISQLPCGYASTSSPLYALKKIPSTQVDDSLLVQASDICSSR 182

Query: 164 -SSVDELNGFKDGIYDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFL 222
            S V E+ G      +  Q    VQRKPGRG+TTLSVSCSDKIARWN +GVQGALL   L
Sbjct: 183 HSDVPEI-GSNSNKGNGSQVADMVQRKPGRGETTLSVSCSDKIARWNVLGVQGALLYQVL 241

Query: 223 QPVYLSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPE 282
           QPVY+S+ITVG+S ++ ++F L +HL+RSLY+RILPLS+EL + F++NKP+F  A VPP 
Sbjct: 242 QPVYISTITVGQSLHSPDNFSLADHLRRSLYERILPLSDELLTSFRLNKPLFFVAPVPPS 301

Query: 283 EFQHSETASSTLTCG-----------------------------YSICWNKSGLHEVILG 313
           EFQHSETA +TLTCG                             YS+CWN SGLHEVILG
Sbjct: 302 EFQHSETAQATLTCGLVFNTLPHMTCVSFLCFLKGGVIYLLALRYSLCWNYSGLHEVILG 361

Query: 314 TTGRKQGTSAKGALSPSTQSSLCKNRLLQVFLSLKHESKIRCLAADISYRELKVVLIFWI 373
           TTGRKQGTSAKGAL PSTQSS+CK RLL++FL   H  K     +  SYRELKV  +  +
Sbjct: 362 TTGRKQGTSAKGALYPSTQSSICKQRLLELFLKETHGHKRESSKSKKSYRELKVCAMLIL 421

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	373
TAIR|locus:2198185	420	TAD1 "ortholog of yeast Tad1"	0.654	0.580	0.600	6.9e-115
ZFIN|ZDB-GENE-070410-64	466	adat1 "adenosine deaminase, tR	0.348	0.278	0.435	2.8e-42
UNIPROTKB|Q28FE8	472	adat1 "tRNA-specific adenosine	0.482	0.381	0.343	8.2e-41
DICTYBASE|DDB_G0278943	545	DDB_G0278943 "adenosine deamin	0.378	0.258	0.385	2.1e-38
UNIPROTKB|Q5ZI16	503	ADAT1 "tRNA-specific adenosine	0.418	0.310	0.385	4.9e-36
UNIPROTKB|F1N0T4	721	ADARB1 "Uncharacterized protei	0.764	0.395	0.353	1.2e-34
ZFIN|ZDB-GENE-000627-2	720	adarb1a "adenosine deaminase,	0.766	0.397	0.329	5.2e-34
RGD|1591020	498	Adat1 "adenosine deaminase, tR	0.442	0.331	0.326	5.3e-34
UNIPROTKB|G5E9B4	729	ADARB1 "Double-stranded RNA-sp	0.761	0.389	0.342	5.4e-34
ZFIN|ZDB-GENE-030219-15	728	adarb1b "adenosine deaminase,	0.769	0.394	0.333	6.9e-34

TAIR|locus:2198185 TAD1 "ortholog of yeast Tad1" [Arabidopsis thaliana (taxid:3702)]

 Score = 727 (261.0 bits), Expect = 6.9e-115, Sum P(2) = 6.9e-115
 Identities = 155/258 (60%), Positives = 185/258 (71%)

Query:   122 KYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSRE-GNSL------------SSVDE 168
             KY+ + G  LHLYISQLPCG AS SS   A +   S +  +SL            S V E
Sbjct:   129 KYKLKSGCLLHLYISQLPCGYASTSSPLYALKKIPSTQVDDSLLVQASDICSSRHSDVPE 188

Query:   169 LNGFKDGIYDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLS 228
             + G      +  Q    VQRKPGRG+TTLSVSCSDKIARWN +GVQGALL   LQPVY+S
Sbjct:   189 I-GSNSNKGNGSQVADMVQRKPGRGETTLSVSCSDKIARWNVLGVQGALLYQVLQPVYIS 247

Query:   229 SITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSE 288
             +ITVG+S ++ ++F L +HL+RSLY+RILPLS+EL + F++NKP+F  A VPP EFQHSE
Sbjct:   248 TITVGQSLHSPDNFSLADHLRRSLYERILPLSDELLTSFRLNKPLFFVAPVPPSEFQHSE 307

Query:   289 TASSTLTCGYSICWNKSGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKNRLLQVFLSLK 348
             TA +TLTCGYS+CWN SGLHEVILGTTGRKQGTSAKGAL PSTQSS+CK RLL++FL   
Sbjct:   308 TAQATLTCGYSLCWNYSGLHEVILGTTGRKQGTSAKGALYPSTQSSICKQRLLELFLKET 367

Query:   349 HESKIRCLAADISYRELK 366
             H  K     +  SYRELK
Sbjct:   368 HGHKRESSKSKKSYRELK 385

GO:0003723 "RNA binding" evidence=IEA;ISS

GO:0004000 "adenosine deaminase activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006396 "RNA processing" evidence=IEA;ISS

ZFIN|ZDB-GENE-070410-64 adat1 "adenosine deaminase, tRNA-specific 1" [Danio rerio (taxid:7955)]

 Score = 254 (94.5 bits), Expect = 2.8e-42, Sum P(2) = 2.8e-42
 Identities = 64/147 (43%), Positives = 87/147 (59%)

Query:     6 WG-DEVSKKVLWQYKSLPKKGKPQ-GREVTVLAAFL-ISS-PSKDL---EVVALGTGTKC 58
             W  DE++      +  LPK+GKP+ GRE T+LAA + I+  P +     +VV+LGTGTKC
Sbjct:     2 WSPDEIASLCYNHFNKLPKRGKPESGREWTLLAAVIQITDCPEQKTVQKQVVSLGTGTKC 61

Query:    59 IGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELG 118
             IGRS +S  GD++NDSHAE++ARR  +R+  TE L K      + G   DVF        
Sbjct:    62 IGRSAMSMKGDVLNDSHAEVIARRGSVRYL-TEQLLK-----AVRGQSSDVF----CAGS 111

Query:   119 PTGKYRFREGWQLHLYISQLPCGDASL 145
               GK+R + G     + SQ PCGDAS+
Sbjct:   112 EKGKWRLKAGVSFLFFTSQTPCGDASI 138

GO:0004000 "adenosine deaminase activity" evidence=IEA

GO:0006396 "RNA processing" evidence=IEA

GO:0003723 "RNA binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|Q28FE8 adat1 "tRNA-specific adenosine deaminase 1" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 275 (101.9 bits), Expect = 8.2e-41, Sum P(2) = 8.2e-41
 Identities = 67/195 (34%), Positives = 110/195 (56%)

Query:   183 IGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFLQ-PVYLSSITVGRSPNTSED 241
             +G ++ KPGRGD T+S+SCSDK+ARWN +G QGALL +FLQ P+YLS++ VG+ P  S+D
Sbjct:   253 VGVLRIKPGRGDRTMSMSCSDKMARWNVLGCQGALLMHFLQQPIYLSAVVVGKCP-FSQD 311

Query:   242 FPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSET---ASSTLT-CG 297
                   ++R+LY+R   +   L   F++N+   + + +  +  +H+ T   A+  L  CG
Sbjct:   312 A-----MERALYNRCHKVLS-LPCAFRLNRVQIIQSDLEFQHGRHALTKKDATRKLVPCG 365

Query:   298 YSICWNKSGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKNRLLQVFLSLKHESKIRCLA 357
              ++ W+    H + +   G +QGT+ K   SP  +S +CK  +   F  L      +  +
Sbjct:   366 AAVSWSAVPHHPLDVTANGYRQGTTRKAIGSPQCRSRICKAEIFNTFRELVQRLSEKQRS 425

Query:   358 ADISYRELKVVLIFW 372
               +S + LK    +W
Sbjct:   426 ESLSSQGLKT---YW 437

GO:0003723 "RNA binding" evidence=ISS

GO:0008033 "tRNA processing" evidence=ISS

GO:0008251 "tRNA-specific adenosine deaminase activity" evidence=ISS

DICTYBASE|DDB_G0278943 DDB_G0278943 "adenosine deaminase acting on tRNA 1" [Dictyostelium discoideum (taxid:44689)]

 Score = 238 (88.8 bits), Expect = 2.1e-38, Sum P(3) = 2.1e-38
 Identities = 59/153 (38%), Positives = 87/153 (56%)

Query:    19 KSLPKKGKPQGREVTVLAAFLI---SSPSKDL-EVVALGTGTKCIGRSLLSPHGDIVNDS 74
             K L KKGKP   E TVLA  ++   ++ S ++ +V++LGTG +C+G+S LS  GD++NDS
Sbjct:    23 KKLIKKGKPISGEWTVLATLVLVVENTSSYEIKQVLSLGTGNRCLGKSSLSNQGDVLNDS 82

Query:    75 HAEIVARRALLRFFYTEVLN--KQKCSNGIE---GLRDDVFNNFLFEL-GPTGKYRFREG 128
             HAEI+ +R+  +F Y E+LN  + K  N I       D   NN   +  G       ++G
Sbjct:    83 HAEIICKRSFQKFCYNEILNLLQSKYYNSILFNIEYHDSNNNNKDNDNNGSLPTISIKKG 142

Query:   129 WQLHLYISQLPCGDASLSSC--HSAPRNFFSRE 159
               LH Y++Q PCGD S+      + P NF  +E
Sbjct:   143 HSLHFYVNQTPCGDCSIFPFKKETQPENFIEKE 175

GO:0006396 "RNA processing" evidence=IEA

GO:0004000 "adenosine deaminase activity" evidence=IEA

GO:0003723 "RNA binding" evidence=IEA;ISS

GO:0005575 "cellular_component" evidence=ND

GO:0008251 "tRNA-specific adenosine deaminase activity" evidence=ISS

GO:0008033 "tRNA processing" evidence=IEA;ISS

GO:0006400 "tRNA modification" evidence=ISS

GO:0046872 "metal ion binding" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

UNIPROTKB|Q5ZI16 ADAT1 "tRNA-specific adenosine deaminase 1" [Gallus gallus (taxid:9031)]

 Score = 251 (93.4 bits), Expect = 4.9e-36, Sum P(2) = 4.9e-36
 Identities = 67/174 (38%), Positives = 98/174 (56%)

Query:   183 IGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFLQ-PVYLSSITVGRSPNTSED 241
             +G ++ KPGRGD T S+SCSDK+ARWN +G QGALL +FLQ PVYLS++ VG+ P +   
Sbjct:   282 VGLLRVKPGRGDRTCSMSCSDKLARWNVLGCQGALLMHFLQYPVYLSAVIVGKCPYS--- 338

Query:   242 FPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEE----FQHSETASST--LT 295
                +E ++R++ +R   +S  L   F   +   L + +  E      Q  +T+S    + 
Sbjct:   339 ---QEAMQRAVIERCRHISL-LPDGFLTQEVQLLQSDLQFEHSRQAIQEGQTSSKRKLVP 394

Query:   296 CGYSICWNKSGLHEVILGTT--GRKQGTSAKGALSPSTQSSLCKNRLLQVFLSL 347
             C  +I W  S + E  L  T  G +QGT+ KG  SP ++S +CK  L   F  L
Sbjct:   395 CSAAISW--SAVPEGPLDVTSDGFRQGTTKKGIGSPQSRSKICKVELFHEFQKL 446

GO:0046872 "metal ion binding" evidence=IEA

GO:0003723 "RNA binding" evidence=ISS

GO:0008033 "tRNA processing" evidence=ISS

GO:0008251 "tRNA-specific adenosine deaminase activity" evidence=ISS

UNIPROTKB|F1N0T4 ADARB1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 383 (139.9 bits), Expect = 1.2e-34, P = 1.2e-34
 Identities = 115/325 (35%), Positives = 174/325 (53%)

Query:     8 DEVSKKVLWQYKSLPKK-GKPQGREVTVLAAFLISSPS--KDLEVVALGTGTKCIGRSLL 64
             D V++ VL ++  L      P  R   VLA  ++++ +  KD +V+++ TGTKCI    +
Sbjct:   343 DAVARLVLDKFGDLTDSFASPHARR-KVLAGIVMTTGTDVKDAKVISISTGTKCINGEYM 401

Query:    65 SPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTGKYR 124
             S  G  +ND HAEI+ARR+LLRF YT++    K SN     +DD   + +FE    G ++
Sbjct:   402 SDRGLALNDCHAEIIARRSLLRFLYTQLEIYLK-SNS----KDDQKRS-IFEKSERGGFK 455

Query:   125 FREGWQLHLYISQLPCGDASLSSCHS------APRNFFSREGNSLSSVDELNGFKDGIYD 178
              +E  Q HLYIS  PCGDA + S H       A R+   +    L +  E +G  +G   
Sbjct:   456 LKENVQFHLYISTSPCGDARIFSPHEPILEEPADRHPNRKARGQLRTKIE-SG--EGTIP 512

Query:   179 SLQHIGRVQRKPG--RGDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSITVGRSP 236
              ++    VQ   G  +G+  L++SCSDK+ARWN VG+QG+LLS F++P+Y SSI +G   
Sbjct:   513 -VRSNASVQTWDGVLQGERLLTMSCSDKMARWNVVGIQGSLLSIFVEPIYFSSIILGSLY 571

Query:   237 NTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETASSTLTC 296
             +        +HL R++Y RI  + E+L   + +NKP+    S       ++E        
Sbjct:   572 HG-------DHLSRAMYQRISNI-EDLPPLYTLNKPLLSGIS-------NAEARQPGKAP 616

Query:   297 GYSICWN--KSGLHEVILGTTGRKQ 319
              +S+ W    S L EVI  TTG+ +
Sbjct:   617 NFSVNWTVGDSAL-EVINATTGKDE 640

GO:0051726 "regulation of cell cycle" evidence=IEA

GO:0045070 "positive regulation of viral genome replication" evidence=IEA

GO:0044387 "negative regulation of protein kinase activity by regulation of protein phosphorylation" evidence=IEA

GO:0030336 "negative regulation of cell migration" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0006396 "RNA processing" evidence=IEA

GO:0006382 "adenosine to inosine editing" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0003726 "double-stranded RNA adenosine deaminase activity" evidence=IEA

GO:0003725 "double-stranded RNA binding" evidence=IEA

ZFIN|ZDB-GENE-000627-2 adarb1a "adenosine deaminase, RNA-specific, B1a" [Danio rerio (taxid:7955)]

 Score = 377 (137.8 bits), Expect = 5.2e-34, P = 5.2e-34
 Identities = 105/319 (32%), Positives = 165/319 (51%)

Query:     8 DEVSKKVLWQYKSLPKK-GKPQGREVTVLAAFLISSPSK--DLEVVALGTGTKCIGRSLL 64
             D VS+ V+ ++  L      P  R   VLA  ++++     D +V+ + TGTKCI    +
Sbjct:   344 DAVSRLVVDKFSELTDNFSSPHARR-KVLAGVVMTTGKDVMDAQVICVTTGTKCINGEYM 402

Query:    65 SPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTGKYR 124
             S  G  +ND HAEI+ARR+L+R+ Y ++  +   S+  E     +F  +  E G    YR
Sbjct:   403 SDRGLALNDCHAEIIARRSLIRYLYNQL--EYFLSDSTEEHEKSIFR-WCSEHG----YR 455

Query:   125 FREGWQLHLYISQLPCGDASLSSCHSA-PRNFFSREGNSLSSVDELNGFKDGIYD-SLQH 182
              ++  Q HLYIS  PCGDA + S H A   +   R  N  +        + G     ++ 
Sbjct:   456 LKDDIQFHLYISTSPCGDARIFSPHEAGAEDQGDRHPNRKARGQLRTKIESGEGTIPVRT 515

Query:   183 IGRVQRKPG--RGDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSITVGRSPNTSE 240
                +Q   G  +G+  L++SCSDKIARWN +GVQG+LLSYF +P+Y SS+ +G   +   
Sbjct:   516 SNTIQTWDGVLQGERLLTMSCSDKIARWNVIGVQGSLLSYFTEPIYFSSLILGSLYHA-- 573

Query:   241 DFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETASSTLTCGYSI 300
                  +HL R++Y RI  + +++  PF++N+P+    S       ++E         +S+
Sbjct:   574 -----DHLSRAMYQRIADM-DDIPPPFRINRPLLSGIS-------NTEARQPGKAPNFSV 620

Query:   301 CWN--KSGLHEVILGTTGR 317
              W     GL E+I  TTG+
Sbjct:   621 NWTVGDQGL-EIINATTGK 638

GO:0003723 "RNA binding" evidence=IEA

GO:0006396 "RNA processing" evidence=IEA

GO:0003725 "double-stranded RNA binding" evidence=IEA

GO:0004000 "adenosine deaminase activity" evidence=IEA

RGD|1591020 Adat1 "adenosine deaminase, tRNA-specific 1" [Rattus norvegicus (taxid:10116)]

 Score = 230 (86.0 bits), Expect = 5.3e-34, Sum P(2) = 5.3e-34
 Identities = 60/184 (32%), Positives = 97/184 (52%)

Query:   183 IGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFLQ-PVYLSSITVGRSPNTSED 241
             +G ++ KPGRGD T S+SCSDK+ARWN +G QGALL +FL+ P+YLS++ +G+ P +   
Sbjct:   275 VGLLRVKPGRGDRTCSMSCSDKMARWNVLGCQGALLMHFLEKPIYLSAVVIGQCPYS--- 331

Query:   242 FPLEEHLKRSLYDR-----ILPLSEELSS-PFQVNKPIFLAASVPPEEFQHSETASSTLT 295
                +E ++R+L  R     +LP   E+     Q +  +F  +       +  ++    + 
Sbjct:   332 ---QEAMRRALTGRCQETLVLPRGFEVQELKIQQSSLLFEQSRCAVHR-KRGDSPGRLVP 387

Query:   296 CGYSICWNKSGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKNRLLQVFLSLKHESKIRC 355
             CG +I W+      + +   G  QGT+ K   SP  +S + K  L + F  L     + C
Sbjct:   388 CGAAISWSAVPQQPLDVTANGFPQGTTKKEIGSPRARSRISKVELFRSFQKL-----LSC 442

Query:   356 LAAD 359
             +A D
Sbjct:   443 IAED 446

GO:0003723 "RNA binding" evidence=IEA;ISO

GO:0008033 "tRNA processing" evidence=IEA;ISO

GO:0008251 "tRNA-specific adenosine deaminase activity" evidence=IEA;ISO

UNIPROTKB|G5E9B4 ADARB1 "Double-stranded RNA-specific editase 1" [Homo sapiens (taxid:9606)]

 Score = 377 (137.8 bits), Expect = 5.4e-34, P = 5.4e-34
 Identities = 111/324 (34%), Positives = 172/324 (53%)

Query:     8 DEVSKKVLWQYKSLPKK-GKPQGREVTVLAAFLISSPS--KDLEVVALGTGTKCIGRSLL 64
             D VS+ VL ++  L      P  R   VLA  ++++ +  KD +V+++ TGTKCI    +
Sbjct:   353 DAVSRLVLGKFGDLTDNFSSPHARR-KVLAGVVMTTGTDVKDAKVISVSTGTKCINGEYM 411

Query:    65 SPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTGKYR 124
             S  G  +ND HAEI++RR+LLRF YT++  +   +N     +DD   + +F+    G +R
Sbjct:   412 SDRGLALNDCHAEIISRRSLLRFLYTQL--ELYLNN-----KDDQKRS-IFQKSERGGFR 463

Query:   125 FREGWQLHLYISQLPCGDASLSSCHS------APRNFFSREGNSLSSVDELNGFKDGIYD 178
              +E  Q HLYIS  PCGDA + S H       A R+   +    L +  E +G  +G   
Sbjct:   464 LKENVQFHLYISTSPCGDARIFSPHEPILEEPADRHPNRKARGQLRTKIE-SG--EGTIP 520

Query:   179 SLQHIGRVQRKPG--RGDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSITVGRSP 236
              ++    +Q   G  +G+  L++SCSDKIARWN VG+QG+LLS F++P+Y SSI +G   
Sbjct:   521 -VRSNASIQTWDGVLQGERLLTMSCSDKIARWNVVGIQGSLLSIFVEPIYFSSIILGSLY 579

Query:   237 NTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETASSTLTC 296
             +        +HL R++Y RI  + E+L   + +NKP+    S       ++E        
Sbjct:   580 HG-------DHLSRAMYQRISNI-EDLPPLYTLNKPLLSGIS-------NAEARQPGKAP 624

Query:   297 GYSICWNKS-GLHEVILGTTGRKQ 319
              +S+ W       EVI  TTG+ +
Sbjct:   625 NFSVNWTVGDSAIEVINATTGKDE 648

GO:0003725 "double-stranded RNA binding" evidence=IEA

GO:0004000 "adenosine deaminase activity" evidence=IEA

GO:0006396 "RNA processing" evidence=IEA

ZFIN|ZDB-GENE-030219-15 adarb1b "adenosine deaminase, RNA-specific, B1b" [Danio rerio (taxid:7955)]

 Score = 376 (137.4 bits), Expect = 6.9e-34, P = 6.9e-34
 Identities = 106/318 (33%), Positives = 163/318 (51%)

Query:     8 DEVSKKVLWQYKSLPKK-GKPQGREVTVLAAFLISSPS--KDLEVVALGTGTKCIGRSLL 64
             D VS+ V+ ++  L      P  R   VLA  ++++ +  KD +V+ + TGTKCI    +
Sbjct:   352 DAVSRLVVDKFSELTDNFTSPHARR-KVLAGVVMTTGTDVKDAQVICVSTGTKCINGEYM 410

Query:    65 SPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTGKYR 124
             S  G  +ND HAEI+ARR+L+R+ Y ++  +   SN  E  +  +F     +    G YR
Sbjct:   411 SDRGLALNDCHAEIIARRSLIRYLYMQL--EHFLSNNKEEHQKSIF----MQCEKRG-YR 463

Query:   125 FREGWQLHLYISQLPCGDASLSSCHSAP-RNFFSREGNSLSSVDELNGFKDGIYD-SLQH 182
              ++  Q HLYIS  PCGDA + S H A   +   R  N  +        + G     ++ 
Sbjct:   464 LKDSVQFHLYISTSPCGDARIFSPHEAGVEDQGDRHPNRKARGQLRTKIESGEGTIPVRS 523

Query:   183 IGRVQRKPG--RGDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSITVGRSPNTSE 240
                +Q   G  +G+  L++SCSDKIARWN VG+QG+L+SYF +P+Y SSI +G   +   
Sbjct:   524 SNTIQTWDGVLQGERLLTMSCSDKIARWNVVGIQGSLMSYFSEPIYFSSIILGSLYHA-- 581

Query:   241 DFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETASSTLTCGYSI 300
                  +HL R++Y RI  + E+L   F +N+P+    S       ++E         +S+
Sbjct:   582 -----DHLSRAMYQRIADI-EDLPQQFSLNRPLLSGIS-------NAEARQPGKAPNFSV 628

Query:   301 CWNKSGLH-EVILGTTGR 317
              W       EVI  TTG+
Sbjct:   629 NWTVGDQALEVINATTGK 646

GO:0003725 "double-stranded RNA binding" evidence=IEA

GO:0004000 "adenosine deaminase activity" evidence=IEA

GO:0003723 "RNA binding" evidence=IEA

GO:0006396 "RNA processing" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.5.4	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	373
pfam02137	329	pfam02137, A_deamin, Adenosine-deaminase (editase)	2e-98
smart00552	374	smart00552, ADEAMc, tRNA-specific and double-stran	3e-94

>gnl|CDD|216895 pfam02137, A_deamin, Adenosine-deaminase (editase) domain

 Score =  295 bits (756), Expect = 2e-98
 Identities = 125/325 (38%), Positives = 164/325 (50%), Gaps = 35/325 (10%)

Query: 51  ALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVF 110
           +LGTGTKC+G   LS  GDI++D HAEI+ARR  LRF Y ++L         EG    +F
Sbjct: 1   SLGTGTKCLGGEHLSNDGDILHDCHAEILARRGFLRFLYEQLLLLNS-----EGKESSIF 55

Query: 111 NNFLFELGPTGKYRFREGWQLHLYISQLPCGDASLSSCHSA-------PRNFFSREGNSL 163
                     GK+R + G  LHLYIS  PCGDAS+ S           P +  +R+    
Sbjct: 56  E----RGIEEGKFRLKPGVSLHLYISTAPCGDASIFSPAEGLLDSELEPDSHPNRQARGQ 111

Query: 164 SSVDELNGFKDGIYDSLQHIGRVQRKPGR--GDTTLSVSCSDKIARWNAVGVQGALLSYF 221
                  G   G        G V+ KPGR  G+ TLS+SCSDK+ARWN +GVQGALLS+F
Sbjct: 112 LRTKIERG--RGTIPVKGSDGVVRTKPGRLDGERTLSMSCSDKLARWNVLGVQGALLSHF 169

Query: 222 LQPVYLSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPP 281
           ++P+YLSSI +G   ++      +EHL+R+   R+  L   L  PF VN P F  +S   
Sbjct: 170 IEPIYLSSIVLGSLNHS------QEHLERAFCGRLEGLLSSLPLPFLVNHPEFSLSS--- 220

Query: 282 EEFQHSETASSTLTCGYSICWNKSGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKNRLL 341
                 ET   T     S+ W+     EV+    GRK GT+ K  LS    S LCK  L 
Sbjct: 221 ----KDETRQKTKPSPLSLNWSLGDDIEVLDALNGRKNGTTPKP-LSKGGPSRLCKAALF 275

Query: 342 QVFLSLKHESKIRCLAADISYRELK 366
             F  L  + K + +    +Y E K
Sbjct: 276 ARFKKLLKKLK-KEVLLAKTYAEAK 299

Adenosine deaminases acting on RNA (ADARs) can deaminate adenosine to form inosine. In long double-stranded RNA, this process is non-specific; it occurs site-specifically in RNA transcripts. The former is important in defence against viruses, whereas the latter may affect splicing or untranslated regions. They are primarily nuclear proteins, but a longer isoform of ADAR1 is found predominantly in the cytoplasm. ADARs are derived from the Tad1-like tRNA deaminases that are present across eukaryotes. These in turn belong to the nucleotide/nucleic acid deaminase superfamily and are characterized by a distinct insert between the two conserved cysteines that are involved in binding zinc. Length = 329

>gnl|CDD|214718 smart00552, ADEAMc, tRNA-specific and double-stranded RNA adenosine deaminase (RNA-specific editase)

 Score =  286 bits (733), Expect = 3e-94
 Identities = 142/377 (37%), Positives = 196/377 (51%), Gaps = 56/377 (14%)

Query: 6   WGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDL-EVVALGTGTKCIGRSLL 64
            GDE+S+ VL ++ SLPK GKP  RE T+LA  ++++   +  +VV+LGTGTKCI    L
Sbjct: 2   TGDEISQLVLEKFGSLPKIGKPGLREWTILAGVVMTNGMDNEKQVVSLGTGTKCISGEKL 61

Query: 65  SPHGDIVNDSHAEIVARRALLRFFYTEVLN-KQKCSNGIEGLRDDVFNNFLFELGPTG-K 122
           SP+G ++ND HAEI+ARR  LRF Y+E+        + I            FE    G K
Sbjct: 62  SPNGLVLNDCHAEILARRGFLRFLYSELQLFNSSSEDSI------------FEKNKEGGK 109

Query: 123 YRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGIYDSLQH 182
           Y+ +     HLYIS LPCGDAS+ S     +N  S+              K     +   
Sbjct: 110 YKLKSNVLFHLYISTLPCGDASIFSPLEPLKNDDSKH-------PVRKNIKRSKLRTKIE 162

Query: 183 IGR----------VQRKPGR--GDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSI 230
           IG           VQ   G   G+  LS+SCSDKIARWN +GVQGALLS+F++P+YLSSI
Sbjct: 163 IGEGTVPVRSSDIVQTWDGIGDGERLLSMSCSDKIARWNVLGVQGALLSHFIEPIYLSSI 222

Query: 231 TVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETA 290
            +G+S  ++      EHL+R+LY R+ PL     +PF+VN+P+    SV        +TA
Sbjct: 223 VLGKSLYSA------EHLERALYGRLDPLDGLP-TPFRVNRPLISLVSVADF---QRQTA 272

Query: 291 SSTLTCGYSICWNK-SGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKNRLLQVFLSLKH 349
            S      S+ W++     E++ G TG+ Q +         + S LCK  L ++F  L  
Sbjct: 273 KSPNF---SVNWSQGDESLEILNGLTGKTQKSL-------GSPSRLCKKALFRLFQKL-C 321

Query: 350 ESKIRCLAADISYRELK 366
               R     ISY E K
Sbjct: 322 SKLKRDDLLHISYAEAK 338

Length = 374

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	373
smart00552	374	ADEAMc tRNA-specific and double-stranded RNA adeno	100.0
KOG2777	542	consensus tRNA-specific adenosine deaminase 1 [RNA	100.0
PF02137	343	A_deamin: Adenosine-deaminase (editase) domain; In	100.0

>smart00552 ADEAMc tRNA-specific and double-stranded RNA adenosine deaminase (RNA-specific editase)

Probab=100.00  E-value=1.3e-89  Score=683.75  Aligned_cols=328  Identities=43%  Similarity=0.674  Sum_probs=264.3

Q ss_pred             chHHHHHHHHHHHHhcCCCCCCCCCCCcceEEEEEEeeCC-CCeEEEEEecCCCcccCCcCCCCCCcccchHHHHHHHHH
Q 017308            5 CWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPS-KDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRA   83 (373)
Q Consensus         5 ~~ad~ia~~v~~~y~~L~~~gkp~~~ewtvlA~iVl~~~~-~~~~vVslgTGtKc~~~~~l~~~G~~lhD~HAEVLARR~   83 (373)
                      .|||+||++|+++|++||++|||..+||||||||||+.+. ++++||||||||||+|+++++.+|++|||||||||||||
T Consensus         1 ~~~d~Ia~~v~~~y~~L~k~~kp~~~e~tvLA~iV~~~~~~~~~~vvslgTGtKc~~~~~~~~~G~~lhD~HAEVlArR~   80 (374)
T smart00552        1 DTGDEISQLVLEKFGSLPKIGKPGLREWTILAGVVMTNGMDNEKQVVSLGTGTKCISGEKLSPNGLVLNDCHAEILARRG   80 (374)
T ss_pred             CHHHHHHHHHHHHHHhhhhcCCCCCCCceeEEEEEEEecCCCceEEEEEecCccccchhhhccCCCEEEeCCHHHHHHHH
Confidence            3799999999999999999999999999999999999874 379999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhccCCCCcccccCCCcCeeeeeCCCC-ceEeeCCcEEEEEeccCCCCccccccccCCCCCCCCc----
Q 017308           84 LLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTG-KYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSR----  158 (373)
Q Consensus        84 f~r~Ly~el~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~Lk~~v~lhlYiS~~PCGDAsi~~~~~~~~~~~~~----  158 (373)
                      |+||||+||+.+.+.          . ...||+..+++ +|+||+||+||||||++|||||||+.+.....+....    
T Consensus        81 f~r~l~~el~~~~~~----------~-~~sif~~~~~~~~~~Lk~~v~lhlYiS~~PCGdAs~~~~~~~~~~~~~~~~~~  149 (374)
T smart00552       81 FLRFLYSELQLFNSS----------S-EDSIFEKNKEGGKYKLKSNVLFHLYISTLPCGDASIFSPLEPLKNDDSKHPVR  149 (374)
T ss_pred             HHHHHHHHHHHHhcc----------C-CCceEEECCCCCceEeCCCcEEEEEeccCCccccccccccccccccccccccc
Confidence            999999999987532          1 34578876544 9999999999999999999999999776433221000    


Q ss_pred             ----CCCCCCccccCCCccccccccccccceeecCCCCC--CcceeechhhHHHHHHHhhhhhhhhhcccccceeceEEe
Q 017308          159 ----EGNSLSSVDELNGFKDGIYDSLQHIGRVQRKPGRG--DTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSITV  232 (373)
Q Consensus       159 ----~~~~~~~~~~~~g~~~~~~~~~~~~g~vrtKPgrg--d~t~smSCSDKl~rWnvlGlQGaLLS~~~ePiylssivi  232 (373)
                          .+........++|+.     +++..|+|||||||+  ++|+||||||||+||||||||||||||||+||||++|||
T Consensus       150 ~~~~~~~~~~~~~~~~g~~-----~~~~~~~vrtkpgr~~~~~t~smSCSDKlarwnvlGlQGaLls~~i~PiYlssivv  224 (374)
T smart00552      150 KNIKRSKLRTKIEIGEGTV-----PVRSSDIVQTWDGIGDGERLLSMSCSDKIARWNVLGVQGALLSHFIEPIYLSSIVL  224 (374)
T ss_pred             cccccccccccccccCCcc-----cccccCccccCCCCCCCCcccccchhHHHHHHHHhhcchHHHHHHhhhhhheeEEe
Confidence                011111122333432     366789999999999  569999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcchHHHHhhhhhcccccccccCCCCceeccceEEeccCCCcccccCccccCCCCCcccEEeeCCCC-ceeE
Q 017308          233 GRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETASSTLTCGYSICWNKSGL-HEVI  311 (373)
Q Consensus       233 g~~~~~~~~~~~~~~l~RAl~~Rl~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~si~W~~~~~-~Evi  311 (373)
                      |....      .+++|+|||++|+.++ ..+|.+|.+++|++...+  ..+|. .  ...+.+ ..|++|+.++. .|++
T Consensus       225 g~~~~------~~~~l~Ra~~~R~~~~-~~l~~~~~~~~p~~~~~~--~~~~~-~--~~~~s~-~~Sl~W~~~~~~~ev~  291 (374)
T smart00552      225 GKSLY------SAEHLERALYGRLDPL-DGLPTPFRVNRPLISLVS--VADFQ-R--QTAKSP-NFSVNWSQGDESLEIL  291 (374)
T ss_pred             cCccC------CHHHHHHHHHhhhccc-ccCCCccccccceeeccC--ccccc-c--cCCCCC-CCeEEEEeCCCcEEEE
Confidence            96432      2479999999999877 578999999999986533  33451 1  111222 34899997765 8999


Q ss_pred             ECCCCccCCcCCCCCCCCCCccHHHHHHHHHHHHHhhhhhhhcccCCCCcHHHHHhhc
Q 017308          312 LGTTGRKQGTSAKGALSPSTQSSLCKNRLLQVFLSLKHESKIRCLAADISYRELKVVL  369 (373)
Q Consensus       312 ~~~~G~k~g~~~K~~~~~~~~S~lcK~~l~~~f~~l~~~~~~~~~~~~~tY~e~K~~a  369 (373)
                      +|.+|++++       .++++|+|||++||++|.+|......... ...||.|+|..|
T Consensus       292 ng~~G~~~~-------~~~~~S~lcK~~l~~~f~~l~~~~~~~~~-~~~sY~e~K~~a  341 (374)
T smart00552      292 NGLTGKTQK-------SLGSPSRLCKKALFRLFQKLCSKLKRDDL-LHISYAEAKEAA  341 (374)
T ss_pred             ECcCCeECC-------CCCCccHHHHHHHHHHHHHHHHhhccccc-CcCCHHHHHHhH
Confidence            999999883       25678999999999999999887654433 238999999775

>KOG2777 consensus tRNA-specific adenosine deaminase 1 [RNA processing and modification]

Probab=100.00  E-value=1.4e-81  Score=637.75  Aligned_cols=323  Identities=41%  Similarity=0.636  Sum_probs=262.2

Q ss_pred             chHHHHHHHHHHHHhcCCCCCCCCCCCcceEEEEEEee-CCCCeEEEEEecCCCcccCCcCCCCCCcccchHHHHHHHHH
Q 017308            5 CWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISS-PSKDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRA   83 (373)
Q Consensus         5 ~~ad~ia~~v~~~y~~L~~~gkp~~~ewtvlA~iVl~~-~~~~~~vVslgTGtKc~~~~~l~~~G~~lhD~HAEVLARR~   83 (373)
                      .++|+||++|+++|++|+++|+|..+|||||||||+.. +..+.+||||||||||++++.|+.+|.+|||||||||||||
T Consensus       173 ~~~~~Ia~lv~~kF~~L~k~~kp~~~~~tvLAgvv~~~~~~~~~~VVslgTGtKcv~g~~ls~~G~iLnDcHAEIlARR~  252 (542)
T KOG2777|consen  173 TLGDEIAELVLEKFDELTKNGKPIPREWTVLAGVVMTKRDGEDKKVVSLGTGTKCVSGDKLSPNGLILNDCHAEILARRG  252 (542)
T ss_pred             hHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhhhhcccccccceEEEeeccCcccCcceeCCCCCeeecccHHHHHHHH
Confidence            58999999999999999999999999999999999987 35678999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhccCCCCcccccCCCcCeeeeeCCCC-ceEeeCCcEEEEEeccCCCCccccccccCCCCC-----CCC
Q 017308           84 LLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTG-KYRFREGWQLHLYISQLPCGDASLSSCHSAPRN-----FFS  157 (373)
Q Consensus        84 f~r~Ly~el~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~Lk~~v~lhlYiS~~PCGDAsi~~~~~~~~~-----~~~  157 (373)
                      |+||||+||+.+.+.           ..+.||+..++| +|+||+||.||||||++|||||+++.+.....+     ...
T Consensus       253 llRfLy~eL~l~~~~-----------~~~Sif~~~~~~~~~~LK~nv~fhLYiS~~PCGdA~i~~~~~~~~~~~~~~~~~  321 (542)
T KOG2777|consen  253 LLRFLYSELQLYNSE-----------KKDSIFEKSKEGGKFTLKENVLFHLYISTSPCGDARIFLPSEPATKKLKHVNST  321 (542)
T ss_pred             HHHHHHHHHHHhhcc-----------CCCceeeecCCCCceecCCCcEEEEEecCCCCCchhhhCccccccccCCCCCch
Confidence            999999999998642           134588866554 699999999999999999999999876543222     111


Q ss_pred             cCCCCCCccccCCCccccccccccccceeecCCCC--CCcceeechhhHHHHHHHhhhhhhhhhcccccceeceEEeCCC
Q 017308          158 REGNSLSSVDELNGFKDGIYDSLQHIGRVQRKPGR--GDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSITVGRS  235 (373)
Q Consensus       158 ~~~~~~~~~~~~~g~~~~~~~~~~~~g~vrtKPgr--gd~t~smSCSDKl~rWnvlGlQGaLLS~~~ePiylssivig~~  235 (373)
                      ..+..+..++.++|+.     .++..+.|||||||  |++++||||||||+|||||||||||||||++||||+|||||..
T Consensus       322 ~~~~~~~~~~~g~g~~-----~~~~~~~V~T~~Gr~~ger~~smSCSDKLaRWNVLGvQGALLsh~lePIYlssIvlg~~  396 (542)
T KOG2777|consen  322 RRGQLRTKIESGEGTI-----PVGSPDAVQTKPGRLDGERLLSMSCSDKLARWNVLGVQGALLSHFLEPIYLSSIVLGKS  396 (542)
T ss_pred             hhhccchhhhcccccc-----ccCCCCcccccCCcccCceeeEechHHHHHHHHHHhhHHHHHHHhhccceeeeeEeccc
Confidence            2334444444555553     36678999999999  8899999999999999999999999999999999999999975


Q ss_pred             CCCCCCcchHHHHhhhhhccccc-ccccCCCCceeccceEEeccCCCcccccCccccCCCCCcccEEeeCCC-CceeEEC
Q 017308          236 PNTSEDFPLEEHLKRSLYDRILP-LSEELSSPFQVNKPIFLAASVPPEEFQHSETASSTLTCGYSICWNKSG-LHEVILG  313 (373)
Q Consensus       236 ~~~~~~~~~~~~l~RAl~~Rl~~-~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~si~W~~~~-~~Evi~~  313 (373)
                      .++      .++|.||++.|+.. +. .+|.+|.+|.|.+...+  +.+ +     ++..++++|+||+.++ ..||++.
T Consensus       397 ~~~------~~~L~rAi~~R~~~~~~-~lp~~~~~n~p~~~~v~--~~~-r-----~~~~~~~~slnW~~~~~~~ev~d~  461 (542)
T KOG2777|consen  397 LHS------PEHLSRAIHGRLSNFLG-NLPPPYILNPPLLSRVS--DAE-R-----QPGKMTPFSLNWSLGDYDLEVNDV  461 (542)
T ss_pred             cCC------HHHHHHHHhcccccccC-CCCCceeecCcccccCC--HhH-h-----ccccCCceeeeeecCCcceEeccc
Confidence            443      36999999999988 54 48999999999877642  222 1     2333445899999877 7899888


Q ss_pred             CCCccCCcCCCCCCCCCCccHHHHHHHHHHHHHhhhhhhhcccCCCCcHHHHHhh
Q 017308          314 TTGRKQGTSAKGALSPSTQSSLCKNRLLQVFLSLKHESKIRCLAADISYRELKVV  368 (373)
Q Consensus       314 ~~G~k~g~~~K~~~~~~~~S~lcK~~l~~~f~~l~~~~~~~~~~~~~tY~e~K~~  368 (373)
                      .+|++-+         +.+|||||++||..|..+......... ...+|.+.|..
T Consensus       462 ~~G~~~~---------~~~srlcK~~~~~~~~~l~~~~~~~~~-~~~~y~~ak~~  506 (542)
T KOG2777|consen  462 TTGRTSL---------GSASRLCKASLFEAFRKLHGLLPKLLL-LPLSYGEAKAE  506 (542)
T ss_pred             ccCcccC---------CCccHHHHHHHHHHHHHHHHhhccccc-cchhHHHHHHH
Confidence            8888432         346999999999999999887653332 23345544443

>PF02137 A_deamin: Adenosine-deaminase (editase) domain; InterPro: IPR002466 Editase (3

Probab=100.00  E-value=8.4e-79  Score=602.64  Aligned_cols=304  Identities=40%  Similarity=0.618  Sum_probs=168.2

Q ss_pred             EEecCCCcccCCcCCCCCCcccchHHHHHHHHHHHHHHHHHHHhhhccCCCCcccccCCCcCeeeeeC--CCCceEeeCC
Q 017308           51 ALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELG--PTGKYRFREG  128 (373)
Q Consensus        51 slgTGtKc~~~~~l~~~G~~lhD~HAEVLARR~f~r~Ly~el~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~Lk~~  128 (373)
                      ||||||||+|.++++.+|++||||||||||||||+||||+||+.+......       .....||+..  .+++|+||||
T Consensus         1 SLgTGtKcl~~~~~~~~G~~lhD~HAEVLARR~f~r~L~~el~~~~~~~~~-------~~~~sif~~~~~~~~~~~Lk~~   73 (343)
T PF02137_consen    1 SLGTGTKCLPASKLSSDGRVLHDCHAEVLARRAFLRFLYEELELLLSGGSG-------DKESSIFERNPDGSGKFRLKPG   73 (343)
T ss_dssp             EEEE---B--GGG--TTS-S-SB--HHHHHHHHHHHHHHHHHHHHHH-HH--------HHHHSSEEE-TTSS--EEE-TT
T ss_pred             CccCCCcccCchhcccCCCEEeeCcHHHHHHHHHHHHHHHHHHHHhcCCCc-------cccCceEeecCCCCceeEeCCC
Confidence            799999999999999999999999999999999999999999998643100       0123467654  5679999999


Q ss_pred             cEEEEEeccCCCCccccccccCCCCCC--CCc---CCCCCCccccCCCcc-------ccccccccccceeecCCCCCCcc
Q 017308          129 WQLHLYISQLPCGDASLSSCHSAPRNF--FSR---EGNSLSSVDELNGFK-------DGIYDSLQHIGRVQRKPGRGDTT  196 (373)
Q Consensus       129 v~lhlYiS~~PCGDAsi~~~~~~~~~~--~~~---~~~~~~~~~~~~g~~-------~~~~~~~~~~g~vrtKPgrgd~t  196 (373)
                      |+||||||++|||||||+.+...+.+.  ...   ........ .+.+..       ......++..|++||||||||++
T Consensus        74 v~lhlY~S~~PCGdAsi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~RtKPgrgd~~  152 (343)
T PF02137_consen   74 VKLHLYISQAPCGDASIFPLSSSPWESDPPPESDAQSPLRTKI-TGAKTVPGEPSDPLRGRANYQQLGIVRTKPGRGDRT  152 (343)
T ss_dssp             EEEEEEESS--TTHHHHS-TT--------------TT--EEEE-TSSSEEE--SS----------HHHHH-----TT---
T ss_pred             eEEEEEeccCccCcccccccccccccccccccccccccccccc-CCCcccCCCccccccccccccCCceeeeeccccCCC
Confidence            999999999999999999876521110  000   00000000 011110       11124578899999999999999


Q ss_pred             eeechhhHHHHHHHhhhhhhhhhcccccceeceEEeCCCCCCCCCcchHHHHhhhhhcccccccccCCCCceeccceEEe
Q 017308          197 LSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLA  276 (373)
Q Consensus       197 ~smSCSDKl~rWnvlGlQGaLLS~~~ePiylssivig~~~~~~~~~~~~~~l~RAl~~Rl~~~~~~l~~~~~~~~p~~~~  276 (373)
                      .||||||||++||||||||||||||||||||++||||.++..     .+++|+|||++|+......++.||++++|.+..
T Consensus       153 ~smSCSDKLarW~vlGlQGaLLS~llePiylssivvg~~~~~-----~~~~l~RA~~~R~~~~~~~l~~~~~~~~p~~~~  227 (343)
T PF02137_consen  153 PSMSCSDKLARWNVLGLQGALLSHLLEPIYLSSIVVGDCPKF-----SQEALRRAFCGRLKSLSSRLPPPYRVNPPLIFF  227 (343)
T ss_dssp             EEE-HHHHHHHHHHH-SSHHHHHTTB----EEEEEES--SS-------HHHHHHHHTGGG-TT-----TT------EEE-
T ss_pred             cceecccHHHHHHHhccccccHHHhcccceeeEEEEecCCCC-----CHHHHHhhhhcccccccccCCCCceecCcceee
Confidence            999999999999999999999999999999999999976421     246999999999955556789999999998874


Q ss_pred             ccCCCcccccCccccCCCCCcccEEeeCCCCceeEECCCCccCCcCCCCCCCCCCccHHHHHHHHHHHHHhhhhhhhccc
Q 017308          277 ASVPPEEFQHSETASSTLTCGYSICWNKSGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKNRLLQVFLSLKHESKIRCL  356 (373)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~si~W~~~~~~Evi~~~~G~k~g~~~K~~~~~~~~S~lcK~~l~~~f~~l~~~~~~~~~  356 (373)
                      .+.. .............++++|++|+..+..|+++  +|+++|..+|+...++++|+|||++||+.|.+|...+....+
T Consensus       228 ~~~~-~~~~~~~~~~~~~~s~~Si~W~~~~~~~i~~--~g~k~G~~~k~~~~~~~~S~lck~~l~~~f~~l~~~~~~~~~  304 (343)
T PF02137_consen  228 SSSR-FSDSSASSSEKAKPSNLSINWCASGEEEIEV--NGVKQGRSKKKSPSPKAASRLCKAALFELFLQLLKALNRSDL  304 (343)
T ss_dssp             ------E-SS------S---SEEEEEET-T-SS-EE--EETTTTE-----ETTS---TTSHHHHHHHHHHHHCCS-SS--
T ss_pred             cccc-cccccccccCCCCCCCceEEEEecCCcEEEE--eCCCCCcccccCCCCCccCcccHHHHHHHHHHHHHhhccccC
Confidence            2210 0122233344566789999999855667776  999999988888889999999999999999999877765666


Q ss_pred             CCCCcHHHHHhhcc
Q 017308          357 AADISYRELKVVLI  370 (373)
Q Consensus       357 ~~~~tY~e~K~~a~  370 (373)
                      ....||.++|..|.
T Consensus       305 ~~~~tY~~~K~~a~  318 (343)
T PF02137_consen  305 KSSKTYYEAKRAAS  318 (343)
T ss_dssp             SS--SHHHHHHT-H
T ss_pred             CCcccHHHHHHCHH
Confidence            66679999998763

5 from EC) are enzymes that alter mRNA by catalyzing the site-selective deamination of adenosine residue into inosine residue. The editase domain contains the active site and binds three Zn atoms []. Several editases share a common global arrangement of domains, from N to C terminus: two 'double-stranded RNA-specific adenosine deaminase' (DRADA) repeat domains (IPR000607 from INTERPRO), followed by three 'double-stranded RNA binding' (DsRBD) domains (IPR001159 from INTERPRO), followed by the editase domain. Other editases have a simplified domains structure with no DRADA_REP and possibly fewer DSRBD domains. Editase that deaminate cytidine are not detected by this signature.; GO: 0003723 RNA binding, 0004000 adenosine deaminase activity, 0006396 RNA processing; PDB: 1ZY7_B.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	373
1zy7_A	403	Crystal Structure Of The Catalytic Domain Of An Ade		2e-35

>pdb|1ZY7|A Chain A, Crystal Structure Of The Catalytic Domain Of An Adenosine Deaminase That Acts On Rna (hadar2) Bound To Inositol Hexakisphosphate (ihp) Length = 403

Iteration: 1
 Score =  145 bits (367), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 116/352 (32%), Positives = 174/352 (49%), Gaps = 55/352 (15%)
Query: 4   ECWGDEVSKKVLWQYKSLPKK-GKPQGREVTVLAAFLISSPS--KDLEVVALGTGTKCIG 60
           +   D VS+ VL ++  L      P  R   VLA  ++++ +  KD +V+++ TGTKCI 
Sbjct: 23  QVLADAVSRLVLGKFGDLTDNFSSPHARR-KVLAGVVMTTGTDVKDAKVISVSTGTKCIN 81
Query: 61  RSLLSPHGDIVNDSHAEIVARRALLRFFYTEV---LNKQKCSNGIEGLRDDVFNNFLFEL 117
              +S  G  +ND HAEI++RR+LLRF YT++   LN +           D     +F+ 
Sbjct: 82  GEYMSDRGLALNDCHAEIISRRSLLRFLYTQLELYLNNK-----------DDQKRSIFQK 130
Query: 118 GPTGKYRFREGWQLHLYISQLPCGDASLSSCHS------APRNFFSREGNSLSSVDELNG 171
              G +R +E  Q HLYIS  PCGDA + S H       A R+   +    L +  E   
Sbjct: 131 SERGGFRLKENVQFHLYISTSPCGDARIFSPHEPILEEPADRHPNRKARGQLRTKIESG- 189
Query: 172 FKDGIYDSLQHIGRVQRKPG--RGDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSS 229
             +G    ++    +Q   G  +G+  L++SCSDKIARWN VG+QG+LLS F++P+Y SS
Sbjct: 190 --EGTI-PVRSNASIQTWDGVLQGERLLTMSCSDKIARWNVVGIQGSLLSIFVEPIYFSS 246
Query: 230 ITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSET 289
           I +G            +HL R++Y RI  + E+L   + +NKP+    S       ++E 
Sbjct: 247 IILG-------SLYHGDHLSRAMYQRISNI-EDLPPLYTLNKPLLSGIS-------NAEA 291
Query: 290 ASSTLTCGYSICWN-KSGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKNRL 340
                   +S+ W       EVI  TTG+ +   A         S LCK+ L
Sbjct: 292 RQPGKAPNFSVNWTVGDSAIEVINATTGKDELGRA---------SRLCKHAL 334
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	373
1zy7_A	403	RNA-specific adenosine deaminase B1, isoform drada	3e-82
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04

>1zy7_A RNA-specific adenosine deaminase B1, isoform drada2A; alpha/beta deaminase motif, zinc coordination, ionsitol hexakisphosphate, hydrolase; HET: IHP; 1.70A {Homo sapiens} Length = 403

 Score =  255 bits (652), Expect = 3e-82
 Identities = 108/374 (28%), Positives = 168/374 (44%), Gaps = 43/374 (11%)

Query: 4   ECWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLIS--SPSKDLEVVALGTGTKCIGR 61
           +   D VS+ VL ++  L            VLA  +++  +  KD +V+++ TGTKCI  
Sbjct: 23  QVLADAVSRLVLGKFGDLTDNFSSPHARRKVLAGVVMTTGTDVKDAKVISVSTGTKCING 82

Query: 62  SLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTG 121
             +S  G  +ND HAEI++RR+LLRF YT++       +  +          +F+    G
Sbjct: 83  EYMSDRGLALNDCHAEIISRRSLLRFLYTQLELYLNNKDDQK--------RSIFQKSERG 134

Query: 122 KYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFS--REGNSLSSVDELNGFKDGIYDS 179
            +R +E  Q HLYIS  PCGDA + S H       +                        
Sbjct: 135 GFRLKENVQFHLYISTSPCGDARIFSPHEPILEEPADRHPNRKARGQLRTKIESGEGTIP 194

Query: 180 LQHIGRVQRKPGR--GDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSITVGRSPN 237
           ++    +Q   G   G+  L++SCSDKIARWN VG+QG+LLS F++P+Y SSI +G   +
Sbjct: 195 VRSNASIQTWDGVLQGERLLTMSCSDKIARWNVVGIQGSLLSIFVEPIYFSSIILGSLYH 254

Query: 238 TSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETASSTLTCG 297
                   +HL R++Y RI  +  +L   + +NKP+            ++E         
Sbjct: 255 -------GDHLSRAMYQRISNIE-DLPPLYTLNKPLL-------SGISNAEARQPGKAPN 299

Query: 298 YSICWNK-SGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKNRLLQVFLSLKHESKIRCL 356
           +S+ W       EVI  TTG+ +   A         S LCK+ L   ++ +  +     L
Sbjct: 300 FSVNWTVGDSAIEVINATTGKDELGRA---------SRLCKHALYCRWMRVHGKVPSHLL 350

Query: 357 AAD----ISYRELK 366
            +       Y E K
Sbjct: 351 RSKITKPNVYHESK 364

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.1 bits (98), Expect = 3e-04
 Identities = 49/282 (17%), Positives = 81/282 (28%), Gaps = 95/282 (33%)

Query: 18  YKSL---PKKGK-PQGREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSLLSPHG----- 68
           +  L   P     P      +L+         D+ VV      K    SL+         
Sbjct: 375 FDRLSVFPPSAHIPTI----LLSLIWFDVIKSDVMVVV----NKLHKYSLVEKQPKESTI 426

Query: 69  ---DIVNDSHAEIVARRALLRFF---YTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTGK 122
               I  +   ++    AL R     Y   + K   S+ +     D    F   +G    
Sbjct: 427 SIPSIYLELKVKLENEYALHRSIVDHYN--IPKTFDSDDLIPPYLD--QYFYSHIG---- 478

Query: 123 YRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGIYDSLQH 182
           +        HL   + P                           + +  F+  ++   + 
Sbjct: 479 H--------HLKNIEHP---------------------------ERMTLFRM-VFLDFRF 502

Query: 183 IGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSITVG-----RSPN 237
           +   ++K  R D+T           WNA G     L       Y   I        R  N
Sbjct: 503 L---EQKI-RHDSTA----------WNASGSILNTLQQL--KFYKPYICDNDPKYERLVN 546

Query: 238 TSEDF--PLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAA 277
              DF   +EE+L  S Y  +L ++  L +    ++ IF  A
Sbjct: 547 AILDFLPKIEENLICSKYTDLLRIA--LMAE---DEAIFEEA 583

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	373
1zy7_A	403	RNA-specific adenosine deaminase B1, isoform drada	100.0

>1zy7_A RNA-specific adenosine deaminase B1, isoform drada2A; alpha/beta deaminase motif, zinc coordination, ionsitol hexakisphosphate, hydrolase; HET: IHP; 1.70A {Homo sapiens}

Probab=100.00  E-value=4.8e-86  Score=662.33  Aligned_cols=330  Identities=34%  Similarity=0.548  Sum_probs=258.4

Q ss_pred             cchHHHHHHHHHHHHhcCCCCCCCCCCCcceEEEEEEeeC--CCCeEEEEEecCCCcccCCcCCCCCCcccchHHHHHHH
Q 017308            4 ECWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSP--SKDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVAR   81 (373)
Q Consensus         4 ~~~ad~ia~~v~~~y~~L~~~gkp~~~ewtvlA~iVl~~~--~~~~~vVslgTGtKc~~~~~l~~~G~~lhD~HAEVLAR   81 (373)
                      ..|||+||++|+++|++||++|||...|||||||||++.+  .++++||||||||||+++++++.+|++|||||||||||
T Consensus        23 ~~~ad~Ia~~v~~~f~~L~~~~kp~~~~~tvLA~iV~~~~~~~~~~~vVslgTGtKc~~~~~~~~~G~vlhD~HAEVlAR  102 (403)
T 1zy7_A           23 QVLADAVSRLVLGKFGDLTDNFSSPHARRKVLAGVVMTTGTDVKDAKVISVSTGTKCINGEYMSDRGLALNDCHAEIISR  102 (403)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTTSGGGCCSCEEEEEEEESSCGGGCEEEEEEECCCBCCGGGCCTTSCSCSBCCHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEEEEEccCCCCceEEEEEcCCCCccCcccccCCCCeeeeCCHHHHHH
Confidence            3689999999999999999999999899999999999975  34799999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhccCCCCcccccCCCcCeeeeeCCCCceEeeCCcEEEEEeccCCCCccccccccCCCCCC-----C
Q 017308           82 RALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTGKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNF-----F  156 (373)
Q Consensus        82 R~f~r~Ly~el~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~Lk~~v~lhlYiS~~PCGDAsi~~~~~~~~~~-----~  156 (373)
                      |||+||||+||+.+....       ++. ...||++.++|+|+||+||+||||||++|||||||+.+.......     +
T Consensus       103 Raf~r~L~~ql~~~~~~~-------~~~-~~sif~~~~~~~~~Lk~~v~lhlY~S~~PCGdAsi~~p~~~~~~~~~~~~~  174 (403)
T 1zy7_A          103 RSLLRFLYTQLELYLNNK-------DDQ-KRSIFQKSERGGFRLKENVQFHLYISTSPCGDARIFSPHEPILEEPADRHP  174 (403)
T ss_dssp             HHHHHHHHHHHHHHHHCH-------HHH-HHCSEEECTTSSEEECTTEEEEEEESSCCTTHHHHC---------------
T ss_pred             HHHHHHHHHHHHHHhccc-------cCC-CCceEEECCCCCeEECCCcEEEEEeccCCCCCcccCCccccccccccccCc
Confidence            999999999998774210       011 235899888889999999999999999999999998765322110     0


Q ss_pred             --CcCCCCCCccccCCCccccccccccccceeecCCC--CCCcceeechhhHHHHHHHhhhhhhhhhcccccceeceEEe
Q 017308          157 --SREGNSLSSVDELNGFKDGIYDSLQHIGRVQRKPG--RGDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSITV  232 (373)
Q Consensus       157 --~~~~~~~~~~~~~~g~~~~~~~~~~~~g~vrtKPg--rgd~t~smSCSDKl~rWnvlGlQGaLLS~~~ePiylssivi  232 (373)
                        ...+.+...++.++|+....     ..+.++|+||  ||++|+||||||||+|||||||||||||||++||||++|||
T Consensus       175 ~~~~~g~lr~k~~~g~g~~p~~-----~~~~~~~~~gvl~g~~t~smSCSDKlarWnvlGlQGaLLs~fi~PiYlssiv~  249 (403)
T 1zy7_A          175 NRKARGQLRTKIESGEGTIPVR-----SNASIQTWDGVLQGERLLTMSCSDKIARWNVVGIQGSLLSIFVEPIYFSSIIL  249 (403)
T ss_dssp             --CCTTCCEEEETTCSSCEECC-----SSCCCCCHHHHHTTCCCEEECHHHHHHHHHHHCSSHHHHHTTBCCCCEEEEEE
T ss_pred             chhhccccceeeccCCCCCCCC-----CcccccccccccccCcceeechHHHHHHHHHhccchHHHhhhcccceeEEEEe
Confidence              01122223333344443211     1233566666  88999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcchHHHHhhhhhcccccccccCCCCceeccceEEeccCCCcccccCccccCCCCCcccEEeeCCC-CceeE
Q 017308          233 GRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETASSTLTCGYSICWNKSG-LHEVI  311 (373)
Q Consensus       233 g~~~~~~~~~~~~~~l~RAl~~Rl~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~si~W~~~~-~~Evi  311 (373)
                      |.+++       .++|+|||++|+..+ ..+|.||++++|.+...+..  +.+     .+..++++|++|+.++ ..||+
T Consensus       250 g~~~~-------~~~l~RA~~~R~~~~-~~lp~~~~~~~p~~~~~~~~--~~r-----~~~~~~~~Si~W~~~~~~~Evi  314 (403)
T 1zy7_A          250 GSLYH-------GDHLSRAMYQRISNI-EDLPPLYTLNKPLLSGISNA--EAR-----QPGKAPNFSVNWTVGDSAIEVI  314 (403)
T ss_dssp             SSCCC-------HHHHHHHHTGGGTTC-CCCCTTCCCCCCEEEECSSC--CCC-----CCSCCCSEEEEEETTCSSCEEE
T ss_pred             CCcCC-------HHHHHHHHHHhhhhh-ccCCCcceecccccccCCcc--ccc-----cCCCCCCeeEEEEcCCCceEEE
Confidence            98753       479999999999875 35799999999998764332  222     1223557899999764 58999


Q ss_pred             ECCCCccCCcCCCCCCCCCCccHHHHHHHHHHHHHhhhhhhhc----ccCCCCcHHHHHhhcc
Q 017308          312 LGTTGRKQGTSAKGALSPSTQSSLCKNRLLQVFLSLKHESKIR----CLAADISYRELKVVLI  370 (373)
Q Consensus       312 ~~~~G~k~g~~~K~~~~~~~~S~lcK~~l~~~f~~l~~~~~~~----~~~~~~tY~e~K~~a~  370 (373)
                      +|.+|++.         ++.+|+|||++||++|.+|...+...    ......||.|+|..|.
T Consensus       315 ~g~tGk~~---------~~~~SrlcK~~l~~~f~~l~~~l~~~~~~~~~~~~~tY~e~K~~a~  368 (403)
T 1zy7_A          315 NATTGKDE---------LGRASRLCKHALYCRWMRVHGKVPSHLLRSKITKPNVYHESKLAAK  368 (403)
T ss_dssp             ETTTTEET---------TSCCCTTSHHHHHHHHHHHHTTSCGGGCSSCCSSCCSHHHHHHTCH
T ss_pred             ECCCCCCC---------cCCcCHHHHHHHHHHHHHHHHHhccccccccCCCccCHHHHHHhhH
Confidence            99999742         34579999999999999998765432    1345679999998763

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00