Citrus Sinensis ID: 017343

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370---
Protein Sequence
MVSFKEFWTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDKDDDQPCAEIVDEEALGNKDFEDEASCSQRTAGGSSKTRDASKHKSAASGIGENLLLENKNEGYDDALGKKS
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHEEcccccccccccccccHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHEEccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccHHHHccccc
Coil and Loop (DISEMBL)
mvsfkefwTKKTLLGLGLGQFLSLLITstgfssselarkginaptsqsfFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFsdvhagdrgsgssprkgDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIysggdkdddqpcaeivdeealgnkdfedeascsqrtaggssktrdaskhksaasgigenlllenknegyddalgkks
Flexible Loop (DISEMBL)
MVSFKEFWTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSdvhagdrgsgssprkGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDKDDDQPCAEIVDEealgnkdfedeascsqrtaggssktrdaskhksaasgigenlllenknegyddalgkks
Low Complexity Region (SEG)
MVSFKEFWTKKTllglglgqflsllITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKItgvvvcvaglvtvIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDKDDDQPCAEIVDEEALGNKDFEDEASCSQRTAGGSSKTRDASKHKSAASGIGENLLLENKNEGYDDALGKKS
Disordered region (IsUnstruct)
***FKEFWTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHA************DALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGG*************************************************************************
Disordered Region (DISOPRED)
**S**E*WTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIY****************************************************************************
Disordered Region (DISEMBL)
MVSFKEFWTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHA***********GDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDKDDDQPCAEIVDEEALGNKDFED*************************SGIGENLLLENKNEGY********
Disordered Region (DISPRO)
MVSFKEFWTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGG*************************************************************************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVSFKEFWTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDKDDDQPCAEIVDEEALGNKDFEDEASCSQRTAGGSSKTRDASKHKSAASGIGENLLLENKNEGYDDALGKKS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	373	2.2.26 [Sep-21-2011]
Q8IXU6	374	Solute carrier family 35	yes	no	0.809	0.807	0.425	1e-65
Q5T1Q4	408	Solute carrier family 35	no	no	0.828	0.757	0.391	3e-65
Q8BGK5	408	Solute carrier family 35	yes	no	0.828	0.757	0.394	5e-65
Q7TML3	375	Solute carrier family 35	no	no	0.812	0.808	0.418	1e-63
Q0V9U2	391	Solute carrier family 35	yes	no	0.785	0.749	0.373	2e-57
O59785	505	Uncharacterized solute ca	yes	no	0.764	0.564	0.401	3e-52

>sp|Q8IXU6|S35F2_HUMAN Solute carrier family 35 member F2 OS=Homo sapiens GN=SLC35F2 PE=1 SV=1

 Score =  250 bits (638), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 132/310 (42%), Positives = 193/310 (62%), Gaps = 8/310 (2%)

Query: 6   EFWTKKTLLGLGLGQFLSLLITSTGFSSSELA-RKGINAPTSQSFFNYVLLAIVYGSLML 64
           + +T   L  + LGQ LSL I  T  +S  LA R  +N P  QSF NY LL ++Y  ++ 
Sbjct: 33  KLFTWNILKTIALGQMLSLCICGTAITSQYLAERYKVNTPMLQSFINYCLLFLIYTVMLA 92

Query: 65  YRRQP------LKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLT 118
           +R         LK KW+ Y++LGL DVE N+++V+AYQYT+LTSV LLDC+ IP +M L+
Sbjct: 93  FRSGSDNLLVILKRKWWKYILLGLADVEANYVIVRAYQYTTLTSVQLLDCFGIPVLMALS 152

Query: 119 WIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAG-DRGSGSSPRKGDALVIAGATLYAVS 177
           W  L  +YR      V VC+ G+ T++ +D+ AG +  SGS    GD LV+ GA+LYA+S
Sbjct: 153 WFILHARYRVIHFIAVAVCLLGVGTMVGADILAGREDNSGSDVLIGDILVLLGASLYAIS 212

Query: 178 NVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAM 237
           NV EE++VKK  R E +  +GLFG IIS +Q+ I+E K++ SIHW    AL F  +AL M
Sbjct: 213 NVCEEYIVKKLSRQEFLGMVGLFGTIISGIQLLIVEYKDIASIHWDWKIALLFVAFALCM 272

Query: 238 FLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIY 297
           F  YSF+P+++K   AT +NL +LT+D++++ + +  +  K   LY ++F  + VG I+Y
Sbjct: 273 FCLYSFMPLVIKVTSATSVNLGILTADLYSLFVGLFLFGYKFSGLYILSFTVIMVGFILY 332

Query: 298 SGGDKDDDQP 307
                   +P
Sbjct: 333 CSTPTRTAEP 342

Putative solute transporter.
Homo sapiens (taxid: 9606)

>sp|Q5T1Q4|S35F1_HUMAN Solute carrier family 35 member F1 OS=Homo sapiens GN=SLC35F1 PE=2 SV=2

 Score =  249 bits (635), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 128/327 (39%), Positives = 199/327 (60%), Gaps = 18/327 (5%)

Query: 5   KEFWTKKTLLGLGLGQFLSLLITSTGFSSSELARK-GINAPTSQSFFNYVLLAIVYGSLM 63
           ++   ++ L+ + LGQ LSLLI   G +S  L+     N P  QSF NY+LL +VY + +
Sbjct: 53  RKVLNREMLISVALGQVLSLLICGIGLTSKYLSEDFHANTPVFQSFLNYILLFLVYTTTL 112

Query: 64  LYRRQP------LKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFL 117
             R+        L+ +W+ Y+ILGLID+E N+LVVKAYQYT+LTS+ LLDC+ IP V+ L
Sbjct: 113 AVRQGEENLLAILRRRWWKYMILGLIDLEANYLVVKAYQYTTLTSIQLLDCFVIPVVILL 172

Query: 118 TWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAG-DRGSGSSPRKGDALVIAGATLYAV 176
           +W FL  +Y+     G+VVC+ G+  ++ +DV  G  +G+G +   GD LV+ GATLY +
Sbjct: 173 SWFFLLIRYKAVHFIGIVVCILGMGCMVGADVLVGRHQGAGENKLVGDLLVLGGATLYGI 232

Query: 177 SNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALA 236
           SNV EE++++   R+E +  +GLFG   S +Q++I+E KEL  + W     L + G++  
Sbjct: 233 SNVWEEYIIRTLSRVEFLGMIGLFGAFFSGIQLAIMEHKELLKVPWDWQIGLLYVGFSAC 292

Query: 237 MFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLII 296
           MF  YSF+P+++K   AT +NLSLLT+D++++   +  +H K   LY ++F  + +GL++
Sbjct: 293 MFGLYSFMPVVIKKTSATSVNLSLLTADLYSLFCGLFLFHYKFSGLYLLSFFTILIGLVL 352

Query: 297 YSGGD----------KDDDQPCAEIVD 313
           YS             K    P   +VD
Sbjct: 353 YSSTSTYIAQDPRVYKQFRNPSGPVVD 379

Putative solute transporter.

Homo sapiens (taxid: 9606)

>sp|Q8BGK5|S35F1_MOUSE Solute carrier family 35 member F1 OS=Mus musculus GN=Slc35f1 PE=2 SV=1

 Score =  248 bits (633), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 129/327 (39%), Positives = 198/327 (60%), Gaps = 18/327 (5%)

Query: 5   KEFWTKKTLLGLGLGQFLSLLITSTGFSSSELARK-GINAPTSQSFFNYVLLAIVYGSLM 63
           ++   ++ L+ + LGQ LSLL+   G +S  LA     N P  QSF NY+LL +VY + +
Sbjct: 53  RKVLNREMLISVALGQVLSLLVCGIGLTSKYLAEDFHANTPVFQSFLNYILLFLVYTTTL 112

Query: 64  LYRRQP------LKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFL 117
             R+        L+ +W+ Y+ILGLID+E N+LVVKAYQYT+LTSV LLDC+ IP V+ L
Sbjct: 113 AVRQGEENLLAILRRRWWKYMILGLIDLEANYLVVKAYQYTTLTSVQLLDCFVIPVVILL 172

Query: 118 TWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAG-DRGSGSSPRKGDALVIAGATLYAV 176
           +W FL  +Y+     G+VVC+ G+  ++ +DV  G  +G+G +   GD LV+ GATLY +
Sbjct: 173 SWFFLLIRYKAVHFIGIVVCILGMGCMVGADVLVGRHQGAGENKLVGDLLVLGGATLYGI 232

Query: 177 SNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALA 236
           SNV EE +++   R+E +  +GLFG   S +Q++I+E KEL  + W     L + G++  
Sbjct: 233 SNVWEESIIRTLSRVEFLGMIGLFGAFFSGIQLAIMEHKELLKVPWDWQIGLLYVGFSAC 292

Query: 237 MFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLII 296
           MF  YSF+P+++K   AT +NLSLLT+D++++   +  +H K   LY ++F  + +GL++
Sbjct: 293 MFGLYSFMPVVIKKTSATSVNLSLLTADLYSLFCGLFLFHYKFSGLYLLSFFTILIGLVL 352

Query: 297 YSGGD----------KDDDQPCAEIVD 313
           YS             K    P   +VD
Sbjct: 353 YSSTSTYIAQDPRVYKQFRNPSGPVVD 379

Putative solute transporter.

Mus musculus (taxid: 10090)

>sp|Q7TML3|S35F2_MOUSE Solute carrier family 35 member F2 OS=Mus musculus GN=Slc35f2 PE=2 SV=2

 Score =  244 bits (622), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 130/311 (41%), Positives = 192/311 (61%), Gaps = 8/311 (2%)

Query: 5   KEFWTKKTLLGLGLGQFLSLLITSTGFSSSELARK-GINAPTSQSFFNYVLLAIVYGSLM 63
           ++ +T   L  + LGQ LSL I  T  +S  LA K  +N P  QSF NY LL +VY  ++
Sbjct: 32  RKLFTWDILKTIALGQMLSLCICGTAITSQYLAEKYRVNTPMLQSFINYCLLFLVYTLML 91

Query: 64  LYRR------QPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFL 117
            ++       + L+ KW+ Y +LGL DVE N+L+V+AYQYT+LTSV LLDC+ IP +M L
Sbjct: 92  AFQSGSDNLLEILRRKWWKYTLLGLADVEANYLIVRAYQYTTLTSVQLLDCFGIPVLMAL 151

Query: 118 TWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAG-DRGSGSSPRKGDALVIAGATLYAV 176
           +W  L+ +Y+      V VC+ G+ T++ +D+ AG +  SGS    GD LV+ GA+LYAV
Sbjct: 152 SWFILRARYKVIHFIAVFVCLLGVGTMVGADILAGREDNSGSDVLIGDILVLLGASLYAV 211

Query: 177 SNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALA 236
           SNV EE++VKK  R E +  +GLFG IIS +Q+ I+E K++  I W    AL F  +AL 
Sbjct: 212 SNVCEEYIVKKLSRQEFLGMVGLFGTIISGIQLLIVEYKDIARIQWDWKIALLFVAFALC 271

Query: 237 MFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLII 296
           MF  YSF+P+++K   AT +NL +LT+D++++   +  +  K   LY ++F  + VG I+
Sbjct: 272 MFCLYSFMPLVIKVTSATSVNLGILTADLYSLFFGLFLFEYKFSGLYILSFTVIMVGFIL 331

Query: 297 YSGGDKDDDQP 307
           Y        +P
Sbjct: 332 YCSTPTRTVEP 342

Putative solute transporter.

Mus musculus (taxid: 10090)

>sp|Q0V9U2|S35F2_XENTR Solute carrier family 35 member F2 OS=Xenopus tropicalis GN=slc35f2 PE=2 SV=2

 Score =  223 bits (567), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 114/305 (37%), Positives = 181/305 (59%), Gaps = 12/305 (3%)

Query: 5   KEFWTKKTLLGLGLGQFLSLLITSTGFSSSELARK-GINAPTSQSFFNYVLLAIVYGSLM 63
           +  ++++ LL + LGQ LSLLI     +S  L+     N P  QSF NY+LL +VY + +
Sbjct: 32  RNVFSREMLLSVALGQVLSLLICGIRLTSKYLSEDFHANTPLFQSFLNYILLFLVYTTTL 91

Query: 64  LYRRQP------LKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFL 117
             R+        LK +W+ Y+ LG+ID+E  +LVVKA+QYT+  S+ LL+C+ IP V+ L
Sbjct: 92  AVRQGEENLLAILKRRWWKYMFLGIIDIEATYLVVKAHQYTTFISIQLLNCFVIPVVILL 151

Query: 118 TWIFLKTKYRYKKITGVVVCVAGLVTVIFSDV-----HAGDRGSGSSPRKGDALVIAGAT 172
           +W FL  +Y+     G + C+ G+  +  +DV       GD   G S   GD LV+ GAT
Sbjct: 152 SWFFLLVRYKVLHFIGAIACILGIGCMAGADVLMGRQQKGDFYPGDSKLIGDVLVLGGAT 211

Query: 173 LYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFG 232
           LY +S+V +E++V+   R+EL+  +GLFG   S +Q++I+E KEL  + W     L + G
Sbjct: 212 LYGISSVCQEYIVRNLSRVELLGMIGLFGSFFSGIQLAIMEHKELLKVPWDWQIGLLYVG 271

Query: 233 YALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAV 292
           +   MF  YSF+P+++K   AT +NLS+LT++++     +  +H K   LY ++F  + +
Sbjct: 272 FTACMFGLYSFMPVVIKKTSATAINLSMLTAELYTFFCGLFLFHYKFSGLYLLSFFTILL 331

Query: 293 GLIIY 297
           GL+ Y
Sbjct: 332 GLVFY 336

Putative solute transporter.

Xenopus tropicalis (taxid: 8364)

>sp|O59785|YCN8_SCHPO Uncharacterized solute carrier family 35 member C320.08 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC320.08 PE=1 SV=1

 Score =  206 bits (524), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 121/301 (40%), Positives = 168/301 (55%), Gaps = 16/301 (5%)

Query: 5   KEFWTKKTLLGLGLGQFLSLLITSTGFSSSELARKGI-NAPTSQSFFNYVLLAIVYGSLM 63
           K FW     +   LGQ LSL IT+T   +  ++  GI N P  Q+F  Y LL +VY    
Sbjct: 139 KRFW-----IVFFLGQVLSLCITATNTFNGYMS--GISNIPAFQTFLVYALLTLVYTPYT 191

Query: 64  LYR-------RQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMF 116
           ++R           +  W Y +I    DVEGN+ VV AYQYT++ S  LLD W    V+ 
Sbjct: 192 VFRMGFKKYFEMIFRHGWKY-IIFAFFDVEGNYFVVLAYQYTNMLSASLLDSWATVAVVI 250

Query: 117 LTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAV 176
           L++IFLK +Y + +I GVV C+ GLV ++ SDV +    S  +P  GD  +I GAT Y V
Sbjct: 251 LSFIFLKVRYHWSQILGVVACIGGLVLLVVSDVISRGDYSAVNPGLGDGYMIIGATCYGV 310

Query: 177 SNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALA 236
           SN  EE+   K     ++  L L+G IIS +Q  I +R  L ++HW++       G+ L 
Sbjct: 311 SNTLEEYFASKLPLYVVIGQLSLYGSIISIIQTFIFDRHHLYTLHWTSEMGGYLAGFILV 370

Query: 237 MFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLII 296
           MFL YS  PIL + + AT  N+SLLTSD W+++I I  +   V WLY IAF  + +GL +
Sbjct: 371 MFLLYSLAPILFRMSSATFYNISLLTSDFWSLVIGIHVFGYHVYWLYPIAFVLIILGLFV 430

Query: 297 Y 297
           Y
Sbjct: 431 Y 431

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	373
255579398	398	conserved hypothetical protein [Ricinus	0.989	0.927	0.743	1e-158
388515617	346	unknown [Lotus japonicus]	0.906	0.976	0.736	1e-150
388521913	346	unknown [Lotus japonicus]	0.906	0.976	0.733	1e-149
356569103	346	PREDICTED: solute carrier family 35 memb	0.908	0.979	0.760	1e-149
363807970	343	uncharacterized protein LOC100805326 [Gl	0.895	0.973	0.762	1e-148
255645683	346	unknown [Glycine max]	0.908	0.979	0.754	1e-148
357501455	344	Solute carrier family 35 member F1 [Medi	0.908	0.985	0.738	1e-147
356534508	329	PREDICTED: solute carrier family 35 memb	0.879	0.996	0.751	1e-146
225433778	357	PREDICTED: solute carrier family 35 memb	0.932	0.974	0.712	1e-145
224065016	307	predicted protein [Populus trichocarpa]	0.801	0.973	0.826	1e-139

>gi|255579398|ref|XP_002530543.1| conserved hypothetical protein [Ricinus communis] gi|223529905|gb|EEF31834.1| conserved hypothetical protein [Ricinus communis]

 Score =  564 bits (1453), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 278/374 (74%), Positives = 319/374 (85%), Gaps = 5/374 (1%)

Query: 2   VSFKEFWTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGS 61
           ++FKEF TKKTL+GL LGQFLSLLIT+TGF+SSEL++KGINAPTSQSF NYVLLAIVYG 
Sbjct: 26  MTFKEFCTKKTLIGLALGQFLSLLITATGFTSSELSKKGINAPTSQSFLNYVLLAIVYGG 85

Query: 62  LMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIF 121
           +MLYR+Q LKAKWYYY+ILGL+DVE NFLVVKAYQYTS+TSVMLLDCW+IP VM LTWIF
Sbjct: 86  VMLYRKQKLKAKWYYYVILGLVDVEANFLVVKAYQYTSITSVMLLDCWSIPSVMLLTWIF 145

Query: 122 LKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVSE 181
           L TKYR+KKI GVVVCVAGLV ++FSDVH+ DR +GS+PRKGDALVIAGATLYAVSNVSE
Sbjct: 146 LHTKYRFKKIAGVVVCVAGLVMIVFSDVHSADRSAGSNPRKGDALVIAGATLYAVSNVSE 205

Query: 182 EFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFY 241
           EFLVK ADRIELM+ LG FG I+SA+QISILER EL+SI WSAGAALPFFG+ALAMFLFY
Sbjct: 206 EFLVKNADRIELMSLLGFFGAIVSAIQISILERSELKSIQWSAGAALPFFGFALAMFLFY 265

Query: 242 SFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGD 301
           SFVP+LLK NG+TMLNLSLLTSDMWAVLIRI AYH+KVDW+Y++AFAAV +GLIIYSGGD
Sbjct: 266 SFVPVLLKINGSTMLNLSLLTSDMWAVLIRIFAYHDKVDWMYYVAFAAVVIGLIIYSGGD 325

Query: 302 KDDDQPCAEIVDEEALGNKDFEDE---ASCSQRTAGGSSKTRDASKHKSAASGIGENLLL 358
           K++D   A++ DEEA   K  ++E    S S  T  GSSKT D+SK   A++ I E    
Sbjct: 326 KEEDHR-ADVADEEAKQIKHLDEEGAAGSHSYTTLAGSSKTGDSSKQDLASASIQEREEK 384

Query: 359 ENKNEGYDDALGKK 372
           EN N G  +A GKK
Sbjct: 385 ENHNSG-KEAQGKK 397

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388515617|gb|AFK45870.1| unknown [Lotus japonicus]

 Score =  536 bits (1381), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 251/341 (73%), Positives = 294/341 (86%), Gaps = 3/341 (0%)

Query: 2   VSFKEFWTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGS 61
           + F++FWT+  L+GLGLGQFLSLLITSTGF+SSELA+KGINAPTSQSF NYV L IVYGS
Sbjct: 3   MDFRKFWTRNMLIGLGLGQFLSLLITSTGFTSSELAKKGINAPTSQSFLNYVFLVIVYGS 62

Query: 62  LMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIF 121
           ++LYRR+PLKAKWYYY+ILGL+DVE NFLVVKAYQYTSLTSVMLLDCW+IPCVM LTWIF
Sbjct: 63  ILLYRRKPLKAKWYYYIILGLVDVEANFLVVKAYQYTSLTSVMLLDCWSIPCVMLLTWIF 122

Query: 122 LKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVSE 181
           LKTKYR+ KITGV+VC+AGLV V+FSDVHAGDR  GS+PRKGD +V AGATLYA+SNVSE
Sbjct: 123 LKTKYRFLKITGVIVCIAGLVLVVFSDVHAGDRAGGSNPRKGDTIVFAGATLYAISNVSE 182

Query: 182 EFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFY 241
           EFL+K ADR+ELM  LGLFGGI+SA+QIS+LER EL+SIHWSAGAALPF G+++AMF+FY
Sbjct: 183 EFLIKNADRVELMGMLGLFGGIVSAIQISVLERNELKSIHWSAGAALPFVGFSVAMFMFY 242

Query: 242 SFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGD 301
           S VP+LLK NG+TMLNLSLLTSDMWAV+IRI AYHEKVDW+YF+AF AV VG++IYSGGD
Sbjct: 243 SLVPVLLKINGSTMLNLSLLTSDMWAVVIRIFAYHEKVDWMYFVAFGAVTVGILIYSGGD 302

Query: 302 KDDDQ---PCAEIVDEEALGNKDFEDEASCSQRTAGGSSKT 339
           KD+D+   P     D   +   +     + S+ T  GSSKT
Sbjct: 303 KDEDEDQHPLNSAEDPPRIKQDEEAKSGNSSRGTGAGSSKT 343

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388521913|gb|AFK49018.1| unknown [Lotus japonicus]

 Score =  535 bits (1378), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 250/341 (73%), Positives = 294/341 (86%), Gaps = 3/341 (0%)

Query: 2   VSFKEFWTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGS 61
           + F++FWT+  L+GLGLGQFLSLLITSTGF+SSELA+KGINAPTSQSF NYV L IVYGS
Sbjct: 3   MDFRKFWTRNMLIGLGLGQFLSLLITSTGFTSSELAKKGINAPTSQSFLNYVFLVIVYGS 62

Query: 62  LMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIF 121
           ++LYRR+PLKAKWYYY+ILGL+DVE NFLVVKAYQYTSLTSVMLLDCW+IPCVM LTWIF
Sbjct: 63  ILLYRRKPLKAKWYYYIILGLVDVEANFLVVKAYQYTSLTSVMLLDCWSIPCVMLLTWIF 122

Query: 122 LKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVSE 181
           LKTKYR+ KITGV+VC+AGLV V+FSD+HAGDR  GS+PRKGDA+V AGATLYA+SNVSE
Sbjct: 123 LKTKYRFLKITGVIVCIAGLVLVVFSDIHAGDRAGGSNPRKGDAIVFAGATLYAISNVSE 182

Query: 182 EFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFY 241
           EFL+K ADR+ELM  LGLFGGI+SA+QIS+LER EL+SIHWSAGAALPF G+++AMF+FY
Sbjct: 183 EFLIKNADRVELMGMLGLFGGIVSAIQISVLERNELKSIHWSAGAALPFVGFSVAMFMFY 242

Query: 242 SFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGD 301
           S VP+LLK NG+TMLNL LLTSDMWAV+IRI AYHEKVDW+YF+AF AV VG++IYSGGD
Sbjct: 243 SLVPVLLKINGSTMLNLPLLTSDMWAVVIRIFAYHEKVDWMYFVAFGAVTVGILIYSGGD 302

Query: 302 KDDDQ---PCAEIVDEEALGNKDFEDEASCSQRTAGGSSKT 339
           KD+D+   P     D   +   +     + S+ T  GSSKT
Sbjct: 303 KDEDEDQHPLNSAEDPPRIKQDEEAKSGNSSRGTGAGSSKT 343

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356569103|ref|XP_003552745.1| PREDICTED: solute carrier family 35 member F1-like [Glycine max]

 Score =  533 bits (1372), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 260/342 (76%), Positives = 296/342 (86%), Gaps = 3/342 (0%)

Query: 1   MVSFKEFWTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYG 60
           M  F   WT  TL+GLGLGQFLSLLITSTGF+SS+LA+KGINAPTSQSF NYV L++VYG
Sbjct: 2   MFDFGRIWTPNTLIGLGLGQFLSLLITSTGFTSSQLAKKGINAPTSQSFLNYVFLSLVYG 61

Query: 61  SLMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWI 120
           +++LYRR+ LKAKWYYY+ILGL+DVE NFLVVKAYQYTSLTSVMLLDCW+IP VM LTW+
Sbjct: 62  TILLYRRKALKAKWYYYIILGLVDVEANFLVVKAYQYTSLTSVMLLDCWSIPSVMLLTWL 121

Query: 121 FLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVS 180
           FLKTKYR+KKITGVVVCVAGLV V+FSDVH+GDR  GS+PRKGD LVIAGATLYA+SNVS
Sbjct: 122 FLKTKYRFKKITGVVVCVAGLVLVVFSDVHSGDRAGGSNPRKGDLLVIAGATLYAISNVS 181

Query: 181 EEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLF 240
           EEFLVK ADR+ELMA LGL GGIISA+QISILER EL+SIHWSA AALPF G+A+AMF+F
Sbjct: 182 EEFLVKNADRVELMAMLGLSGGIISAIQISILERNELKSIHWSAEAALPFVGFAVAMFMF 241

Query: 241 YSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGG 300
           YS VP+LLK NG+TMLNLSLLTSDMWAVLIRI AYHEKVDW+YF++F AV +GLIIYSGG
Sbjct: 242 YSLVPVLLKINGSTMLNLSLLTSDMWAVLIRIFAYHEKVDWMYFVSFGAVTIGLIIYSGG 301

Query: 301 DKDDDQ--PCAEIVDEEALGNKDFE-DEASCSQRTAGGSSKT 339
           D D+DQ  P A IVD      +D E +  + S+ TA GSSKT
Sbjct: 302 DIDEDQHPPNAAIVDLGPAVKQDEEANSGNHSKGTAAGSSKT 343

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363807970|ref|NP_001242713.1| uncharacterized protein LOC100805326 [Glycine max] gi|255639600|gb|ACU20094.1| unknown [Glycine max]

 Score =  532 bits (1371), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 257/337 (76%), Positives = 293/337 (86%), Gaps = 3/337 (0%)

Query: 6   EFWTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLY 65
           + WT+ TL+GLGLGQFLSLLITSTGF+SSELA+KGINAPTSQSF NYV   +VYG+++LY
Sbjct: 4   QIWTRNTLIGLGLGQFLSLLITSTGFTSSELAKKGINAPTSQSFLNYVFSTLVYGTVLLY 63

Query: 66  RRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTK 125
           RR+ LKAKWYYY+ILGL+DVE NFLVVKAYQYTSLTSVMLLDCW+IP VM LTW+FLKTK
Sbjct: 64  RRKALKAKWYYYIILGLVDVEANFLVVKAYQYTSLTSVMLLDCWSIPSVMLLTWLFLKTK 123

Query: 126 YRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVSEEFLV 185
           YR+KKITGVVVCVAGLV V+FSDVH+GDR  GS+PRKGD LVIAGATLYA+SNVSEEFLV
Sbjct: 124 YRFKKITGVVVCVAGLVLVVFSDVHSGDRAGGSNPRKGDLLVIAGATLYAISNVSEEFLV 183

Query: 186 KKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVP 245
           K ADR+ELMA LGL GGIISA+QISILER EL+SIHWSA AALPF G+A+AMF+FYS VP
Sbjct: 184 KSADRVELMAMLGLSGGIISAIQISILERNELKSIHWSAKAALPFVGFAVAMFMFYSLVP 243

Query: 246 ILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDKDDD 305
           +LLK NG+TMLNLSLLTSDMWAVLIRI AYHEKVDW+YF++F AV +GLIIYSGGD+DDD
Sbjct: 244 VLLKINGSTMLNLSLLTSDMWAVLIRIFAYHEKVDWMYFVSFGAVTIGLIIYSGGDRDDD 303

Query: 306 Q--PCAEIVDEEALGNKDFE-DEASCSQRTAGGSSKT 339
           Q  P A I D      +D E +  + S+  A GSSKT
Sbjct: 304 QHPPNAAIDDHRPAVKQDEEANSGNHSKGAAAGSSKT 340

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255645683|gb|ACU23335.1| unknown [Glycine max]

 Score =  530 bits (1366), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 258/342 (75%), Positives = 292/342 (85%), Gaps = 3/342 (0%)

Query: 1   MVSFKEFWTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYG 60
           M  F   WT+ TL+GLGLGQFLSLLITSTGF+SSELA+KGINAPTSQSF NYV L +VYG
Sbjct: 2   MFDFARIWTRNTLIGLGLGQFLSLLITSTGFTSSELAKKGINAPTSQSFLNYVFLTLVYG 61

Query: 61  SLMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWI 120
           +++LYRR+ LKAKWYYY+ILGL+DVE NFLVVKAYQYTSLTSVMLLDCW+IP VM LTW+
Sbjct: 62  TVLLYRRKALKAKWYYYIILGLVDVEANFLVVKAYQYTSLTSVMLLDCWSIPSVMLLTWL 121

Query: 121 FLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVS 180
           FLKTKYR+KKITGVVVCVAGLV V+FSDVH+GDR  GS+PRKGD LVIAGATLYA+SNVS
Sbjct: 122 FLKTKYRFKKITGVVVCVAGLVLVVFSDVHSGDRAGGSNPRKGDLLVIAGATLYAISNVS 181

Query: 181 EEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLF 240
           EEFLVK ADR+ELMA LGL GGIISA+QISILER EL+SIHWSA AALPF G+A+AMF+F
Sbjct: 182 EEFLVKSADRVELMAMLGLSGGIISAIQISILERNELKSIHWSAEAALPFVGFAVAMFMF 241

Query: 241 YSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGG 300
           YS VP+LLK NG+ MLNL LLTSDMWAVLIRI AYHEKVDW+YF++F AV +GLIIYSGG
Sbjct: 242 YSLVPVLLKINGSIMLNLFLLTSDMWAVLIRIFAYHEKVDWMYFVSFGAVTIGLIIYSGG 301

Query: 301 DKDDDQ--PCAEIVDEEALGNKDFEDEASCSQRTAG-GSSKT 339
           D+DDDQ  P A I D      +D E  +    + AG GSSKT
Sbjct: 302 DRDDDQHPPNAAIDDHRPAVKQDEEANSGNHSKGAGAGSSKT 343

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357501455|ref|XP_003621016.1| Solute carrier family 35 member F1 [Medicago truncatula] gi|355496031|gb|AES77234.1| Solute carrier family 35 member F1 [Medicago truncatula]

 Score =  527 bits (1358), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 251/340 (73%), Positives = 294/340 (86%), Gaps = 1/340 (0%)

Query: 1   MVSFKEFWTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYG 60
           ++  K++WTK TL+GL LGQFLSLLIT+TGF+SS+LA+KGINAPTSQSF NYV L I+YG
Sbjct: 2   IIDIKKYWTKNTLIGLALGQFLSLLITATGFASSDLAKKGINAPTSQSFLNYVFLMIIYG 61

Query: 61  SLMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWI 120
           +++LYRR+PLKAKWYYY++LGL+DVE NFLVVKAYQYTSLTSVMLLDCW+IPCVM LTWI
Sbjct: 62  TILLYRRKPLKAKWYYYILLGLVDVEANFLVVKAYQYTSLTSVMLLDCWSIPCVMLLTWI 121

Query: 121 FLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVS 180
           FLKTKYR+KKITGV+VC+AGLV V+FSDVHAGDR  GS+PR GD LVIAGATLYA SNVS
Sbjct: 122 FLKTKYRFKKITGVIVCIAGLVLVVFSDVHAGDRAGGSNPRLGDVLVIAGATLYAFSNVS 181

Query: 181 EEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLF 240
           EEFLVK ADR ELMA LGLFGGIISA+QI+ILER EL+SIHWSAGAA PFFG+++AMFLF
Sbjct: 182 EEFLVKNADREELMAMLGLFGGIISAIQIAILERNELKSIHWSAGAAFPFFGFSVAMFLF 241

Query: 241 YSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGG 300
           YS VP+LLK NG+TMLNLSLLTSDMW+VLIRI AYHEKVDW+Y++AF AV +G++IYS G
Sbjct: 242 YSLVPVLLKLNGSTMLNLSLLTSDMWSVLIRIFAYHEKVDWMYYLAFGAVVIGIVIYSIG 301

Query: 301 DKDDDQPCAEIVDEEALGNKDFE-DEASCSQRTAGGSSKT 339
             D+DQ  A  V+E     +D E   A+ S+    GSSKT
Sbjct: 302 FGDEDQNPANAVEEPVAIRQDEEASSATHSKGNVSGSSKT 341

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356534508|ref|XP_003535795.1| PREDICTED: solute carrier family 35 member F1-like [Glycine max]

 Score =  524 bits (1349), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 248/330 (75%), Positives = 289/330 (87%), Gaps = 2/330 (0%)

Query: 1   MVSFKEFWTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYG 60
           M +F++FW++KTLLGL LGQFLSLLITSTGF+SS LA+KGINAPTSQSF NYV LAIVYG
Sbjct: 1   MATFEQFWSRKTLLGLALGQFLSLLITSTGFTSSLLAKKGINAPTSQSFLNYVFLAIVYG 60

Query: 61  SLMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWI 120
            ++LYRR+ LKAKWYYY++LGL+DVE NFLVVKAYQYTSLTSVMLLDCW+IPCVM  TWI
Sbjct: 61  IIVLYRREALKAKWYYYILLGLVDVEANFLVVKAYQYTSLTSVMLLDCWSIPCVMLFTWI 120

Query: 121 FLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVS 180
           FLKTKY +KK+TGVVVC+AGLV V+FSDVHAGDR  GS+P  GD LVIAGATLYAVSNVS
Sbjct: 121 FLKTKYGFKKVTGVVVCIAGLVLVVFSDVHAGDRAGGSNPSIGDILVIAGATLYAVSNVS 180

Query: 181 EEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLF 240
           EEFLVK ADR+ELMA LGLFGGIISA+QISILER EL+SIHWSAGA LPF G+A+AMF+F
Sbjct: 181 EEFLVKNADRVELMAMLGLFGGIISAIQISILERNELKSIHWSAGAVLPFVGFAVAMFMF 240

Query: 241 YSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGG 300
           YS VP+LLK NG+TMLNLSLLTSDMWAVLIRI AYHEKVDW+Y++AF AV VGLIIYSGG
Sbjct: 241 YSLVPVLLKINGSTMLNLSLLTSDMWAVLIRIFAYHEKVDWMYYVAFGAVVVGLIIYSGG 300

Query: 301 DKDDDQPCAEIVDEEALGNKDFEDEASCSQ 330
           D D++Q    + ++ +   +  ++EA+  +
Sbjct: 301 DGDENQDPHHVAEDAS--QRQHDEEATSGK 328

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225433778|ref|XP_002271925.1| PREDICTED: solute carrier family 35 member F1 [Vitis vinifera] gi|297745172|emb|CBI39164.3| unnamed protein product [Vitis vinifera]

 Score =  521 bits (1341), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 250/351 (71%), Positives = 296/351 (84%), Gaps = 3/351 (0%)

Query: 1   MVSFKEFWTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYG 60
           M+S KEFWTKKTL+GLGLGQFLSLLITSTGFSSSELAR+GIN PTSQSF NYVLLAIVYG
Sbjct: 1   MLSSKEFWTKKTLVGLGLGQFLSLLITSTGFSSSELARRGINVPTSQSFLNYVLLAIVYG 60

Query: 61  SLMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWI 120
             M+ R++ LKAKWYYY++L L+DVE NFLVVKAYQYTS+TSVMLLDC+TIPCV+  T  
Sbjct: 61  ITMILRKRALKAKWYYYVVLALVDVEANFLVVKAYQYTSITSVMLLDCFTIPCVIIFTRF 120

Query: 121 FLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVS 180
           FLKTKYR KK+TG  +C+AG+V VIFSDVHA DR  G+SP KGD LVIAG+ LYAVSNVS
Sbjct: 121 FLKTKYRIKKLTGASICIAGIVIVIFSDVHASDRAGGNSPLKGDLLVIAGSILYAVSNVS 180

Query: 181 EEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLF 240
           EEFLVK ADR+ELMA LG FG I+SA+QISILER EL+SI WSAGAALPF G++ AMF+F
Sbjct: 181 EEFLVKSADRVELMALLGSFGAIVSAIQISILERNELKSIRWSAGAALPFVGFSAAMFMF 240

Query: 241 YSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGG 300
           YS VP+LLK +G+ MLNLSLLTSDMWAV IRI AYH+KVDW+YFIAFAAV +GL+IYSGG
Sbjct: 241 YSLVPVLLKLSGSAMLNLSLLTSDMWAVFIRIFAYHQKVDWMYFIAFAAVVIGLVIYSGG 300

Query: 301 DKDDDQPCAEIVDEEALGNKDFEDEA---SCSQRTAGGSSKTRDASKHKSA 348
           DKDD+Q  A++ DE+A  ++ F++EA   + +Q +  G S+  D++K  SA
Sbjct: 301 DKDDEQHTADVADEDAERSRHFDEEAGPGNSNQSSMAGGSRIGDSNKDDSA 351

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224065016|ref|XP_002301631.1| predicted protein [Populus trichocarpa] gi|222843357|gb|EEE80904.1| predicted protein [Populus trichocarpa]

 Score =  500 bits (1288), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 247/299 (82%), Positives = 273/299 (91%)

Query: 1   MVSFKEFWTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYG 60
           M+SFKEFWTKKTL+ LGLGQFLSLLITSTGFSSSELAR+GINAPTSQSF NYV LAIVYG
Sbjct: 1   MLSFKEFWTKKTLVALGLGQFLSLLITSTGFSSSELARRGINAPTSQSFLNYVFLAIVYG 60

Query: 61  SLMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWI 120
           S+M YR+Q LKAKWYYY IL L+DVE NFLVVKAYQYTS+TSVMLLDCW+IP VM LTW 
Sbjct: 61  SIMFYRKQALKAKWYYYAILSLVDVEANFLVVKAYQYTSITSVMLLDCWSIPSVMVLTWF 120

Query: 121 FLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVS 180
           FL TKYR+KKI GV VCVAGLV V+FSDVH GDR  GS+PRKGDALVIAGATLYA+SNVS
Sbjct: 121 FLSTKYRFKKIAGVAVCVAGLVMVVFSDVHTGDRSGGSNPRKGDALVIAGATLYAISNVS 180

Query: 181 EEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLF 240
           EEFLVK ADR+ELM+ LG FG IISA+QISILER E++SIHWSAGAALPFFG+++AMFLF
Sbjct: 181 EEFLVKNADRVELMSLLGFFGAIISAIQISILERNEVKSIHWSAGAALPFFGFSVAMFLF 240

Query: 241 YSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSG 299
           YS VPILLK +G+TMLNLSLLTSDMWAV+IRI AYHEKVDW+YF+AFAAVAVGLI+YSG
Sbjct: 241 YSLVPILLKISGSTMLNLSLLTSDMWAVVIRIFAYHEKVDWMYFVAFAAVAVGLIVYSG 299

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	373
TAIR|locus:2081262	333	AT3G59340 "AT3G59340" [Arabido	0.823	0.921	0.633	6.7e-104
TAIR|locus:2081212	339	AT3G59320 "AT3G59320" [Arabido	0.857	0.943	0.595	1.2e-97
TAIR|locus:2081197	363	AT3G59310 "AT3G59310" [Arabido	0.621	0.639	0.656	2.7e-77
DICTYBASE|DDB_G0287003	417	DDB_G0287003 "solute carrier f	0.895	0.800	0.382	1.3e-61
UNIPROTKB|Q8IXU6	374	SLC35F2 "Solute carrier family	0.729	0.727	0.421	2.5e-56
UNIPROTKB|Q5T1Q4	408	SLC35F1 "Solute carrier family	0.731	0.669	0.395	9.9e-55
MGI|MGI:1919272	375	Slc35f2 "solute carrier family	0.729	0.725	0.414	1.3e-54
MGI|MGI:2139810	408	Slc35f1 "solute carrier family	0.731	0.669	0.398	1.6e-54
WB|WBGene00022270	429	Y73E7A.3 [Caenorhabditis elega	0.750	0.652	0.406	7e-54
ASPGD|ASPL0000029133	399	AN5236 [Emericella nidulans (t	0.801	0.749	0.340	5.6e-45

TAIR|locus:2081262 AT3G59340 "AT3G59340" [Arabidopsis thaliana (taxid:3702)]

 Score = 1029 (367.3 bits), Expect = 6.7e-104, P = 6.7e-104
 Identities = 197/311 (63%), Positives = 236/311 (75%)

Query:     9 TKKTXXXXXXXXXXXXXITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQ 68
             TKKT              TS  F+SSELARKGINAPTSQ+F +Y LLA+VYG +MLYRR 
Sbjct:    13 TKKTLIGLGLGQILSLLCTSNAFTSSELARKGINAPTSQTFLSYTLLAVVYGGIMLYRRP 72

Query:    69 PLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRY 128
              +K KWY+Y +L L+DVEGNFLVVKA QYTS+TS+MLLDCW IPCV+ LTW+FLKTKYR 
Sbjct:    73 TIKGKWYHYFLLALVDVEGNFLVVKANQYTSITSIMLLDCWAIPCVLVLTWMFLKTKYRL 132

Query:   129 KKIXXXXXXXXXXXXXIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVSEEFLVKKA 188
              KI             +FSDVHAG R  GS+P KGD LV+AGATLYAVSN +EEFLVK A
Sbjct:   133 MKISGVFICIAGVVMVLFSDVHAGSRAGGSNPVKGDFLVLAGATLYAVSNTTEEFLVKNA 192

Query:   189 DRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPILL 248
             D +ELM F+GLFG IISA+Q++I E+ EL++IHWSA A  PF  +A+ MFLFYS +PILL
Sbjct:   193 DTVELMTFMGLFGAIISAIQVAIFEQGELKAIHWSADAVFPFLRFAITMFLFYSLLPILL 252

Query:   249 KTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDKDDDQPC 308
             +TNG+TM  LSLLTSDMWAVLIRI AYHEKVDWLY++AFA  A+GLIIYS  +KD+++  
Sbjct:   253 RTNGSTMFTLSLLTSDMWAVLIRIFAYHEKVDWLYYLAFATTAIGLIIYSMKEKDEEEER 312

Query:   309 AE----IVDEE 315
              E    ++DEE
Sbjct:   313 EEQRKKLLDEE 323

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2081212 AT3G59320 "AT3G59320" [Arabidopsis thaliana (taxid:3702)]

 Score = 970 (346.5 bits), Expect = 1.2e-97, P = 1.2e-97
 Identities = 193/324 (59%), Positives = 232/324 (71%)

Query:     3 SFKEFWTKKTXXXXXXXXXXXXXITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSL 62
             +F E  TKKT              T     +SE+ARKGI+APTSQ+F  YV LAIVYG +
Sbjct:     5 NFNEMKTKKTLIGLGLGQIISLLSTLIASIASEIARKGISAPTSQTFLGYVSLAIVYGGI 64

Query:    63 MLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFL 122
             MLYRR  +K KWY+Y +L ++DVE NFLVVKA+Q TS+TS+MLLDCW IPCV+ LTW+FL
Sbjct:    65 MLYRRSAIKVKWYHYFLLAVVDVEANFLVVKAFQNTSMTSIMLLDCWAIPCVLVLTWVFL 124

Query:   123 KTKYRYKKIXXXXXXXXXXXXXIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVSEE 182
             KT+YR  KI             +FSDVHAGDR  GS+P KGD LVIAGATLYAVSNV+EE
Sbjct:   125 KTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNVTEE 184

Query:   183 FLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYS 242
             FLVK AD  ELMAFLGLFG II+A+QISI ER  +++I WS  A L + G AL +FLFY+
Sbjct:   185 FLVKNADVTELMAFLGLFGAIIAAIQISIFERGAVRAIQWSTEAILLYIGGALGLFLFYT 244

Query:   243 FVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDK 302
              + IL+K NG+TM NLSLLTSDMWA+LIR   YHEKVDWLYF+AFA  A GLIIYS  +K
Sbjct:   245 LITILIKNNGSTMFNLSLLTSDMWAILIRTFGYHEKVDWLYFLAFATTATGLIIYSMKEK 304

Query:   303 DDD-QPCAEIVDEEALGNKDFEDE 325
             D++ Q   E+V E     K F++E
Sbjct:   305 DEEEQRSGEVVSER---RKLFDEE 325

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2081197 AT3G59310 "AT3G59310" [Arabidopsis thaliana (taxid:3702)]

 Score = 778 (278.9 bits), Expect = 2.7e-77, P = 2.7e-77
 Identities = 153/233 (65%), Positives = 172/233 (73%)

Query:     5 KEFWTKKTXXXXXXXXXXXXXITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLML 64
             KE  TKKT              TS GF+SSELARKGIN PTSQ F NYVLLAIVYGS+ML
Sbjct:     6 KEIRTKKTLIGLGLGQLLSLLATSNGFTSSELARKGINVPTSQCFLNYVLLAIVYGSIML 65

Query:    65 YRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKT 124
             YRR  +KAKWYYY +L  +DVE NFLVVKAYQYTSLTSVMLLDCW IPCV+ LTW +LKT
Sbjct:    66 YRRSDIKAKWYYYFLLAFVDVEANFLVVKAYQYTSLTSVMLLDCWAIPCVLVLTWFYLKT 125

Query:   125 KYRYKKIXXXXXXXXXXXXXIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVSEEFL 184
             KYR  KI             +FSDVHAGDR  GS+P KGD LV+AGATLYAVSN SEEFL
Sbjct:   126 KYRLMKISGVFICIVGVFMVVFSDVHAGDRAGGSNPVKGDFLVLAGATLYAVSNTSEEFL 185

Query:   185 VKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAM 237
             VK AD +ELM FLG FG IISA+Q+SILER EL++IHWS GA + F   A+++
Sbjct:   186 VKNADTVELMTFLGFFGAIISAIQVSILERDELKAIHWSTGA-VGFLAMAISI 237

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

DICTYBASE|DDB_G0287003 DDB_G0287003 "solute carrier family 35 member protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 630 (226.8 bits), Expect = 1.3e-61, P = 1.3e-61
 Identities = 132/345 (38%), Positives = 206/345 (59%)

Query:    26 ITSTGFSSSELARK-GINAPTSQSFFNYVLLAIVYGSLMLYRR----QPLKAKWYYYLIL 80
             I  TG  S  L +K G+N PT+QS  NY+LL  VY  L+L +R    + +K K  Y+  L
Sbjct:    41 IAGTGIFSQLLVKKYGVNIPTTQSLLNYILLC-VY-LLVLVKRGVLWETIKTKSIYFAPL 98

Query:    81 GLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKIXXXXXXXXX 140
              L+D+E N++VVKAYQYT++TSVMLLDC+TIPCV+ L+ IFLKT++ +  I         
Sbjct:    99 ALVDLEANYIVVKAYQYTTITSVMLLDCFTIPCVVVLSRIFLKTRFTFVHIIAVLIALAG 158

Query:   141 XXXXIFSDVHAGDRGSG-SSPRKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGL 199
                 + SD+  G+  +G S+P  GD L +A +  YA+SNV +E  VKK DR+  +A +GL
Sbjct:   159 MAILVVSDIIEGESANGGSNPLLGDFLCLASSVCYAISNVGQEATVKKYDRVTYLAMIGL 218

Query:   200 FGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPILLKTNGATMLNLS 259
             +G I   +QI+ILER EL ++ WS G      G+AL +F+ YSF P +++  GAT++NLS
Sbjct:   219 YGSIFCGIQIAILERNELATMAWSGGVVGYIVGFALCLFIMYSFTPTMMEIAGATVMNLS 278

Query:   260 LLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYS-GGDKDDDQPCAEIVDEEALG 318
             LLTSDM+ +++ I  +   + WLYF++F  +   L+IY+             +++ +   
Sbjct:   279 LLTSDMFGIIVAIFVFDRDLSWLYFLSFFVIVSALVIYNLSAPHVKSSEVQNLINNDNSN 338

Query:   319 NKDFEDEASCSQRTAGGSSKTRDASKHKSAASGIGENLLLENKNE 363
             N +  +  + S   +  S+   +++ + S  +    NL+L+N +E
Sbjct:   339 NNNISNYNNGSLNDS--SNNNNNSNNNSSDLTNSSTNLILDNGDE 381

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

UNIPROTKB|Q8IXU6 SLC35F2 "Solute carrier family 35 member F2" [Homo sapiens (taxid:9606)]

 Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
 Identities = 118/280 (42%), Positives = 172/280 (61%)

Query:    26 ITSTGFSSSELA-RKGINAPTSQSFFNYVLLAIVYGSLMLYRRQP------LKAKWYYYL 78
             I  T  +S  LA R  +N P  QSF NY LL ++Y  ++ +R         LK KW+ Y+
Sbjct:    53 ICGTAITSQYLAERYKVNTPMLQSFINYCLLFLIYTVMLAFRSGSDNLLVILKRKWWKYI 112

Query:    79 ILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKIXXXXXXX 138
             +LGL DVE N+++V+AYQYT+LTSV LLDC+ IP +M L+W  L  +YR           
Sbjct:   113 LLGLADVEANYVIVRAYQYTTLTSVQLLDCFGIPVLMALSWFILHARYRVIHFIAVAVCL 172

Query:   139 XXXXXXIFSDVHAG-DRGSGSSPRKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFL 197
                   + +D+ AG +  SGS    GD LV+ GA+LYA+SNV EE++VKK  R E +  +
Sbjct:   173 LGVGTMVGADILAGREDNSGSDVLIGDILVLLGASLYAISNVCEEYIVKKLSRQEFLGMV 232

Query:   198 GLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPILLKTNGATMLN 257
             GLFG IIS +Q+ I+E K++ SIHW    AL F  +AL MF  YSF+P+++K   AT +N
Sbjct:   233 GLFGTIISGIQLLIVEYKDIASIHWDWKIALLFVAFALCMFCLYSFMPLVIKVTSATSVN 292

Query:   258 LSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIY 297
             L +LT+D++++ + +  +  K   LY ++F  + VG I+Y
Sbjct:   293 LGILTADLYSLFVGLFLFGYKFSGLYILSFTVIMVGFILY 332

GO:0006810 "transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|Q5T1Q4 SLC35F1 "Solute carrier family 35 member F1" [Homo sapiens (taxid:9606)]

 Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
 Identities = 111/281 (39%), Positives = 171/281 (60%)

Query:    26 ITSTGFSSSELARK-GINAPTSQSFFNYVLLAIVYGSLMLYRRQP------LKAKWYYYL 78
             I   G +S  L+     N P  QSF NY+LL +VY + +  R+        L+ +W+ Y+
Sbjct:    74 ICGIGLTSKYLSEDFHANTPVFQSFLNYILLFLVYTTTLAVRQGEENLLAILRRRWWKYM 133

Query:    79 ILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKIXXXXXXX 138
             ILGLID+E N+LVVKAYQYT+LTS+ LLDC+ IP V+ L+W FL  +Y+           
Sbjct:   134 ILGLIDLEANYLVVKAYQYTTLTSIQLLDCFVIPVVILLSWFFLLIRYKAVHFIGIVVCI 193

Query:   139 XXXXXXIFSDVHAG-DRGSGSSPRKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFL 197
                   + +DV  G  +G+G +   GD LV+ GATLY +SNV EE++++   R+E +  +
Sbjct:   194 LGMGCMVGADVLVGRHQGAGENKLVGDLLVLGGATLYGISNVWEEYIIRTLSRVEFLGMI 253

Query:   198 GLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPILLKTNGATMLN 257
             GLFG   S +Q++I+E KEL  + W     L + G++  MF  YSF+P+++K   AT +N
Sbjct:   254 GLFGAFFSGIQLAIMEHKELLKVPWDWQIGLLYVGFSACMFGLYSFMPVVIKKTSATSVN 313

Query:   258 LSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYS 298
             LSLLT+D++++   +  +H K   LY ++F  + +GL++YS
Sbjct:   314 LSLLTADLYSLFCGLFLFHYKFSGLYLLSFFTILIGLVLYS 354

GO:0006810 "transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:1919272 Slc35f2 "solute carrier family 35, member F2" [Mus musculus (taxid:10090)]

 Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
 Identities = 116/280 (41%), Positives = 170/280 (60%)

Query:    26 ITSTGFSSSELARK-GINAPTSQSFFNYVLLAIVYGSLMLYRR------QPLKAKWYYYL 78
             I  T  +S  LA K  +N P  QSF NY LL +VY  ++ ++       + L+ KW+ Y 
Sbjct:    53 ICGTAITSQYLAEKYRVNTPMLQSFINYCLLFLVYTLMLAFQSGSDNLLEILRRKWWKYT 112

Query:    79 ILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKIXXXXXXX 138
             +LGL DVE N+L+V+AYQYT+LTSV LLDC+ IP +M L+W  L+ +Y+           
Sbjct:   113 LLGLADVEANYLIVRAYQYTTLTSVQLLDCFGIPVLMALSWFILRARYKVIHFIAVFVCL 172

Query:   139 XXXXXXIFSDVHAG-DRGSGSSPRKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFL 197
                   + +D+ AG +  SGS    GD LV+ GA+LYAVSNV EE++VKK  R E +  +
Sbjct:   173 LGVGTMVGADILAGREDNSGSDVLIGDILVLLGASLYAVSNVCEEYIVKKLSRQEFLGMV 232

Query:   198 GLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPILLKTNGATMLN 257
             GLFG IIS +Q+ I+E K++  I W    AL F  +AL MF  YSF+P+++K   AT +N
Sbjct:   233 GLFGTIISGIQLLIVEYKDIARIQWDWKIALLFVAFALCMFCLYSFMPLVIKVTSATSVN 292

Query:   258 LSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIY 297
             L +LT+D++++   +  +  K   LY ++F  + VG I+Y
Sbjct:   293 LGILTADLYSLFFGLFLFEYKFSGLYILSFTVIMVGFILY 332

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0006810 "transport" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:2139810 Slc35f1 "solute carrier family 35, member F1" [Mus musculus (taxid:10090)]

 Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
 Identities = 112/281 (39%), Positives = 170/281 (60%)

Query:    26 ITSTGFSSSELARK-GINAPTSQSFFNYVLLAIVYGSLMLYRRQP------LKAKWYYYL 78
             +   G +S  LA     N P  QSF NY+LL +VY + +  R+        L+ +W+ Y+
Sbjct:    74 VCGIGLTSKYLAEDFHANTPVFQSFLNYILLFLVYTTTLAVRQGEENLLAILRRRWWKYM 133

Query:    79 ILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKIXXXXXXX 138
             ILGLID+E N+LVVKAYQYT+LTSV LLDC+ IP V+ L+W FL  +Y+           
Sbjct:   134 ILGLIDLEANYLVVKAYQYTTLTSVQLLDCFVIPVVILLSWFFLLIRYKAVHFIGIVVCI 193

Query:   139 XXXXXXIFSDVHAG-DRGSGSSPRKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFL 197
                   + +DV  G  +G+G +   GD LV+ GATLY +SNV EE +++   R+E +  +
Sbjct:   194 LGMGCMVGADVLVGRHQGAGENKLVGDLLVLGGATLYGISNVWEESIIRTLSRVEFLGMI 253

Query:   198 GLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPILLKTNGATMLN 257
             GLFG   S +Q++I+E KEL  + W     L + G++  MF  YSF+P+++K   AT +N
Sbjct:   254 GLFGAFFSGIQLAIMEHKELLKVPWDWQIGLLYVGFSACMFGLYSFMPVVIKKTSATSVN 313

Query:   258 LSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYS 298
             LSLLT+D++++   +  +H K   LY ++F  + +GL++YS
Sbjct:   314 LSLLTADLYSLFCGLFLFHYKFSGLYLLSFFTILIGLVLYS 354

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0006810 "transport" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

WB|WBGene00022270 Y73E7A.3 [Caenorhabditis elegans (taxid:6239)]

 Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
 Identities = 120/295 (40%), Positives = 177/295 (60%)

Query:    26 ITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQP------LKAKWYYYLI 79
             +  TG SS  L  + +NAP +Q+F NY LL  VY   +  +         L+ + + YLI
Sbjct:    74 LCGTGVSSQLLVNQNVNAPAAQAFSNYFLLCFVYCISLACKNDENGLVVVLRKRGWRYLI 133

Query:    80 LGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKIXXXXXXXX 139
             L +IDVE N+++VKAYQYT+LTSV LLDC TIP V+FL+W+FL  +Y    I        
Sbjct:   134 LAIIDVEANYMIVKAYQYTNLTSVQLLDCATIPTVLFLSWLFLSVRYLASHILGVTICII 193

Query:   140 XXXXXIFSDVHAGDRGS---GSSPRKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAF 196
                  I++D   GD+G+   GS+   GD L +A A +YA+ NV+EEFLVK+  R E +  
Sbjct:   194 GIACVIWADA-LGDKGALDGGSNKVLGDILCLAAAVMYAICNVAEEFLVKQHSRTEYLGM 252

Query:   197 LGLFGGIISAVQISILERKELQSIHWSAGAALPFFG-YALAMFLFYSFVPILLKTNGATM 255
             LGLFG I+S VQ ++ E++ L  I W  G  + +F  +A +MF+FYS V ++L+   A M
Sbjct:   253 LGLFGCIVSGVQTAVFEQEALSKIVWD-GTIVSYFALFAFSMFIFYSLVTVVLQKTSALM 311

Query:   256 LNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGD---KDDDQP 307
              NLS LT+D +++L  I  + +   +LYF++F    +G +IYS  +   +D D+P
Sbjct:   312 FNLSTLTADFYSLLFGIFMFKDTFHYLYFVSFIVCIIGSVIYSMKETQVRDADEP 366

GO:0016020 "membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

ASPGD|ASPL0000029133 AN5236 [Emericella nidulans (taxid:162425)]

 Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
 Identities = 105/308 (34%), Positives = 157/308 (50%)

Query:     4 FKEFWTKKTXXXXXXXXXXXXXITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLM 63
             F  F TK+               T T   ++ LA K  N P  Q+FFNY LL I++ S  
Sbjct:    52 FAYFRTKEFYVTLLLGQFLAIANTGTNTFNTLLANKNTNIPAFQTFFNYSLLNIIFTSYT 111

Query:    64 LYRR------QPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFL 117
             +Y+       + L  + + Y+IL   DVEGN+ +V AY+YT++ S  L++ W I  V+ +
Sbjct:   112 IYKYGIKGWFEMLWKRGWKYIILSFCDVEGNYFMVLAYEYTTMMSAQLINFWAIVVVVVV 171

Query:   118 TWIFLKTKYRYKKIXXXXXXXXXXXXXIFSDVHAGDRG---SGSSPRKGDALVIAGATLY 174
             +++FL+ +Y   ++             I SD   G  G   S  +  KGD   + GA+ Y
Sbjct:   172 SFLFLRVRYHISQVLGILICIGGMGILIASDHIQGTNGGDISRGNQIKGDLFALLGASFY 231

Query:   175 AVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYA 234
              ++N  EEF V  A   E++  +G FG II+ VQ +I +RK +Q  HW         GY 
Sbjct:   232 GLANTGEEFFVSTAPVYEVIGQMGFFGMIINGVQAAIFDRKSIQHAHWDGQVGGYLTGYT 291

Query:   235 LAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGL 294
             L + +FYS  P+L +   A   N+SLLT + W V+I I  +H  V W+Y IAF  + VG 
Sbjct:   292 LCLSIFYSTAPLLFRLASAAFFNISLLTMNFWGVIIGIRVFHYSVHWMYPIAFVLIIVGQ 351

Query:   295 IIYSGGDK 302
             ++Y  G K
Sbjct:   352 LVYYLGRK 359

GO:0008150 "biological_process" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8IXU6	S35F2_HUMAN	No assigned EC number	0.4258	0.8096	0.8074	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	373
pfam06027	336	pfam06027, DUF914, Eukaryotic protein of unknown f	1e-156
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	4e-09
TIGR00950	260	TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Tran	1e-04
pfam08449	303	pfam08449, UAA, UAA transporter family	0.001

>gnl|CDD|218861 pfam06027, DUF914, Eukaryotic protein of unknown function (DUF914)

 Score =  441 bits (1136), Expect = e-156
 Identities = 177/306 (57%), Positives = 216/306 (70%), Gaps = 7/306 (2%)

Query: 9   TKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR- 67
           TK+TL+GL LGQ LSL IT T  +S  LA KG+NAP  Q+F NY LL +VY  ++ +RR 
Sbjct: 9   TKRTLIGLALGQILSLCITGTATTSQYLAEKGVNAPAFQTFLNYALLFLVYTGILAFRRG 68

Query: 68  -----QPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFL 122
                  +K KW+ Y+IL LIDVE N+LVVKAYQYT+LTSV LLDCW IP V+ L+W FL
Sbjct: 69  EKNLLVIIKRKWWKYIILALIDVEANYLVVKAYQYTNLTSVQLLDCWAIPVVLVLSWFFL 128

Query: 123 KTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRG-SGSSPRKGDALVIAGATLYAVSNVSE 181
           K +YR   I GVV+C+ G+V V+ SDV AG R   GS+P  GD LV+AGATLYAVSNV+E
Sbjct: 129 KVRYRASHILGVVICILGVVCVVGSDVLAGRRAYGGSNPVLGDILVLAGATLYAVSNVTE 188

Query: 182 EFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFY 241
           EFLVKK  R E +  LGLFG IIS +Q +I ERK L  IHW     L F G+AL MFL Y
Sbjct: 189 EFLVKKLSRTEFLGMLGLFGAIISGIQTAIFERKALYKIHWDWEIGLLFAGFALCMFLLY 248

Query: 242 SFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGD 301
           S +PIL+K   ATM NLSLLTSD W++LI I  +H KV WLYF+AFA + +GLIIYS  +
Sbjct: 249 SLMPILIKKTSATMFNLSLLTSDFWSLLIGIFLFHYKVSWLYFLAFATIIIGLIIYSMKE 308

Query: 302 KDDDQP 307
            D+ + 
Sbjct: 309 TDEAEA 314

This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as being putative membrane proteins. Length = 336

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 56.8 bits (137), Expect = 4e-09
 Identities = 55/291 (18%), Positives = 108/291 (37%), Gaps = 18/291 (6%)

Query: 21  FLSLLITSTGFSSSELARKGINAPTSQSFFNYV-------LLAIVYGSLMLYRRQPLKAK 73
            L+LL+    +  S +A K          F          LL +    L     +P    
Sbjct: 9   LLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRP 68

Query: 74  WYYYLILGLI-DVEGNFLVVKAYQYTSL-TSVMLLDCWTIPCVMFLTWIFLKTKYRYKKI 131
           W   L+L L+       L+  A +YTS   + +++    +   +    + L  +    +I
Sbjct: 69  WLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQI 128

Query: 132 TGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVSEEFLVKKADRI 191
            G+++ +AG++ ++         G G     G  L +A A L+A+     + L +     
Sbjct: 129 LGILLALAGVLLILLGGG-----GGGILSLLGLLLALAAALLWALYTALVKRLSRLGPVT 183

Query: 192 ELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPILLKTN 251
             +    L   ++  +         + S  W     L  F   LA  L+Y      L+  
Sbjct: 184 LALLLQLLLALLLLLLFFLSGFGAPILSRAWLLLLYLGVFSTGLAYLLWY----YALRLL 239

Query: 252 GATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDK 302
           GA+++ L  L   ++A L+ +    E +     +  A V +G+++ S   +
Sbjct: 240 GASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLRAR 290

Length = 292

>gnl|CDD|233205 TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Transporter

 Score = 43.1 bits (102), Expect = 1e-04
 Identities = 55/257 (21%), Positives = 94/257 (36%), Gaps = 14/257 (5%)

Query: 42  NAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLT 101
             P   + F  ++ A++    +L RR PLK      L+  L       L   A +   + 
Sbjct: 15  QVPLYFAVFRRLIFALLLLLPLLRRRPPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVG 74

Query: 102 SVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPR 161
              LL       V  L+ +  K + R   +   V+ +AG V ++ SD      G+ S   
Sbjct: 75  EAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAV-LLLSD------GNLSINP 127

Query: 162 KGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLF--GGIISAVQISILERK-ELQ 218
            G  L +     +A+  V  + LVKK     L     +   G ++       L    +  
Sbjct: 128 AGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQAL 187

Query: 219 SIHWSAGAALPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEK 278
           S+ W A   L   G ALA FL+       L     +  ++  L   + A+L+ +    E 
Sbjct: 188 SLQWGALLYLGLIGTALAYFLWNK----GLTLVDPSAASILALAEPLVALLLGLLILGET 243

Query: 279 VDWLYFIAFAAVAVGLI 295
           +     I  A +   ++
Sbjct: 244 LSLPQLIGGALIIAAVL 260

[Transport and binding proteins, Amino acids, peptides and amines]. Length = 260

>gnl|CDD|219846 pfam08449, UAA, UAA transporter family

 Score = 40.3 bits (95), Expect = 0.001
 Identities = 45/264 (17%), Positives = 96/264 (36%), Gaps = 13/264 (4%)

Query: 49  FFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDC 108
           F    L+ ++Y  L    +   K     Y+++       + L  +A +Y S  + ++   
Sbjct: 40  FLFISLVGLLYLLLFKKLKPR-KIPLKTYVLIVATFFLSSVLNNEALKYISYPTHVIFKS 98

Query: 109 W-TIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSD--VHAGDRGSGSSPRKGDA 165
              IP VM L  +    +Y   +    ++   G++    +        + +  S   G A
Sbjct: 99  CKLIP-VMILGILIYGKRYSSLQYLSALLITLGVIIFTLASAKDSKNSKLTTFSDNVGIA 157

Query: 166 LVIAGATLYAVSNVSEEFLVKK--ADRIELMAFLGLFGGIISAVQISILERKELQSIHWS 223
           L+     + A++  ++E L KK      E+M +  L       + +  +    L S   S
Sbjct: 158 LLFGALLMDALTGNTQEKLYKKYGKHSKEMMFYSHLLSLPFFLLGLLDIRTGLLFS-AES 216

Query: 224 AGAALPFF-----GYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEK 278
                P         +L  ++   FV  L+   GA  + L        ++L+ +  +   
Sbjct: 217 FCLRHPSVLFYLLLNSLTQYVGQFFVFYLISEFGALTVTLVTTLRKFVSLLLSVLLFGNP 276

Query: 279 VDWLYFIAFAAVAVGLIIYSGGDK 302
           +    ++    V +G+ +Y+   K
Sbjct: 277 LTLQQWLGTLLVFLGIFLYAYLKK 300

This family includes transporters with a specificity for UDP-N-acetylglucosamine. Length = 303

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	373
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	100.0
KOG2766	336	consensus Predicted membrane protein [Function unk	100.0
PLN00411	358	nodulin MtN21 family protein; Provisional	100.0
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.97
PRK11272	292	putative DMT superfamily transporter inner membran	99.97
PRK11689	295	aromatic amino acid exporter; Provisional	99.97
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.96
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.96
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.96
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.96
PRK15430	296	putative chloramphenical resistance permease RarD;	99.95
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.92
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.92
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.9
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.9
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.9
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.89
KOG2765	416	consensus Predicted membrane protein [Function unk	99.89
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.87
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.82
COG2962	293	RarD Predicted permeases [General function predict	99.82
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.81
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.81
KOG1581	327	consensus UDP-galactose transporter related protei	99.79
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.79
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.76
KOG1580	337	consensus UDP-galactose transporter related protei	99.73
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.64
KOG1582	367	consensus UDP-galactose transporter related protei	99.6
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.55
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.48
COG2510	140	Predicted membrane protein [Function unknown]	99.47
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.46
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	99.44
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.37
COG2510	140	Predicted membrane protein [Function unknown]	99.35
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	99.32
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.2
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.18
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.17
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	99.15
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.03
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.97
PRK15430	296	putative chloramphenical resistance permease RarD;	98.93
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.87
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.85
PLN00411	358	nodulin MtN21 family protein; Provisional	98.7
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	98.68
PRK11689	295	aromatic amino acid exporter; Provisional	98.67
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.65
PRK11272	292	putative DMT superfamily transporter inner membran	98.63
KOG2922	335	consensus Uncharacterized conserved protein [Funct	98.61
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.6
PRK13499	345	rhamnose-proton symporter; Provisional	98.59
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.51
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.47
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.46
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.28
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.22
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.21
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.21
COG2962	293	RarD Predicted permeases [General function predict	98.2
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.17
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	98.11
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.99
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.97
COG0697	292	RhaT Permeases of the drug/metabolite transporter	97.97
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.78
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.77
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	97.7
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.66
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	97.65
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.58
KOG4510	346	consensus Permease of the drug/metabolite transpor	97.55
PRK11431	105	multidrug efflux system protein; Provisional	97.49
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	97.47
COG2076	106	EmrE Membrane transporters of cations and cationic	97.45
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.37
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.37
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.31
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.28
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.2
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	97.13
PRK11431	105	multidrug efflux system protein; Provisional	97.12
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.09
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.09
COG2076	106	EmrE Membrane transporters of cations and cationic	96.99
KOG1581	327	consensus UDP-galactose transporter related protei	96.88
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.7
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	96.66
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.44
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	96.35
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.2
KOG1580	337	consensus UDP-galactose transporter related protei	96.05
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	96.0
PRK13499	345	rhamnose-proton symporter; Provisional	95.99
KOG2765	416	consensus Predicted membrane protein [Function unk	95.86
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	95.6
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	95.4
KOG4831	125	consensus Unnamed protein [Function unknown]	94.2
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	94.07
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	93.52
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	92.55
KOG1582	367	consensus UDP-galactose transporter related protei	91.88
KOG2922	335	consensus Uncharacterized conserved protein [Funct	91.53
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	91.18
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	90.32
PRK02237	109	hypothetical protein; Provisional	90.05
KOG1443	349	consensus Predicted integral membrane protein [Fun	89.35
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	89.23
KOG3912	372	consensus Predicted integral membrane protein [Gen	87.63
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	85.17
PF04342	108	DUF486: Protein of unknown function, DUF486; Inter	82.59
COG1742	109	Uncharacterized conserved protein [Function unknow	82.37
PF05297	381	Herpes_LMP1: Herpesvirus latent membrane protein 1	81.41
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	81.23
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	80.66

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=100.00  E-value=1.1e-39  Score=293.33  Aligned_cols=305  Identities=54%  Similarity=0.896  Sum_probs=279.8

Q ss_pred             hhh-hHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc------ccCccchHH
Q 017343            4 FKE-FWTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR------QPLKAKWYY   76 (373)
Q Consensus         4 ~~~-~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~------~~~~~~~~~   76 (373)
                      .|. .++|+.++.+++|++++++.++++..++.+.+.+...|.+++++.+++..++..+...+|+      ...+++||+
T Consensus         2 ~~~~~~~~~~~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~   81 (334)
T PF06027_consen    2 FKSFLFTRRFWIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWK   81 (334)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHH
Confidence            455 4899999999999999999999999999999988889999999999998888887766665      236788999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCC-
Q 017343           77 YLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRG-  155 (373)
Q Consensus        77 ~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~-  155 (373)
                      +++++++...+|++.+.|++|++.+.++++..+..+++++++++++|+|+++.|++|++++++|++++...|...++++ 
T Consensus        82 y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~  161 (334)
T PF06027_consen   82 YFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSS  161 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999887654433 


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHH
Q 017343          156 SGSSPRKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYAL  235 (373)
Q Consensus       156 ~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (373)
                      .+.+...|++++++|+++||+++++.|+..++.|+..+.++..+++.++..+....+|..++...+|++.....+++..+
T Consensus       162 ~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~  241 (334)
T PF06027_consen  162 SGSNPILGDLLALLGAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYAL  241 (334)
T ss_pred             CCCccchhHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHH
Confidence            56678999999999999999999999999999999999999999999999998888998888888898887788889999


Q ss_pred             HHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCCCCCCCcc
Q 017343          236 AMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDKDDDQPC  308 (373)
Q Consensus       236 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~~~~  308 (373)
                      +.+.+|...+.+++..+|+..++...+..+++++++++++|+++++..++|.++|++|.++|+..+++.++++
T Consensus       242 ~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~~~~~  314 (334)
T PF06027_consen  242 CLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPEEEAR  314 (334)
T ss_pred             HHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCcccccc
Confidence            9999999999999999999999999999999999999999999999999999999999999998776554444

Some of the sequences in this family are annotated as putative membrane proteins.

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=100.00  E-value=7.4e-34  Score=235.80  Aligned_cols=301  Identities=67%  Similarity=1.155  Sum_probs=274.1

Q ss_pred             chhhhH-HHHHHHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhcccCccchHHHHHHH
Q 017343            3 SFKEFW-TKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILG   81 (373)
Q Consensus         3 ~~~~~~-~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g   81 (373)
                      +.++++ +|+.++++.+|+.+++|.++....++.++.++.+.|..++|..+.+-+++..+++.+|++..+..|+++++++
T Consensus         6 ~~~eik~tkk~li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~~~~~~~~hYilla   85 (336)
T KOG2766|consen    6 NFNEIKSTKKTLIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRRKYIKAKWRHYILLA   85 (336)
T ss_pred             hHHHhhhchhhhheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhhHHHHHHHHHhhhee
Confidence            344444 8999999999999999999999999999998899999999999999999999999999888888899999999


Q ss_pred             HHHHHHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCCCCCCc
Q 017343           82 LIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPR  161 (373)
Q Consensus        82 ~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~  161 (373)
                      +...-+|++...|+||++.+.++++-.-..+.+.+++|+++|.|.++.++.|+++|++|++++..+|.+.++..++.++.
T Consensus        86 ~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~  165 (336)
T KOG2766|consen   86 FVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPV  165 (336)
T ss_pred             EEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999988888889999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHH
Q 017343          162 KGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFY  241 (373)
Q Consensus       162 ~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (373)
                      .|+++.++++-+||..++..+.+.|+.|..+++....++|+++..+- .+++.......+|++. ...++.+.++++++|
T Consensus       166 ~GD~lvi~GATlYaVSNv~EEflvkn~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~tl~w~~~-i~~yl~f~L~MFllY  243 (336)
T KOG2766|consen  166 KGDFLVIAGATLYAVSNVSEEFLVKNADRVELMGFLGLFGAIISAIQ-FIFERHHVSTLHWDSA-IFLYLRFALTMFLLY  243 (336)
T ss_pred             cCcEEEEecceeeeeccccHHHHHhcCcHHHHHHHHHHHHHHHHHHH-HhhhccceeeEeehHH-HHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999777 6777777777778744 344555889999999


Q ss_pred             HHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCCCCCCCc
Q 017343          242 SFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDKDDDQP  307 (373)
Q Consensus       242 ~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~~~  307 (373)
                      ...+.+++..+++..++...++-.+++++  ..||-+.+|...+..+.+..|.++|..+++.+++.
T Consensus       244 sl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~re~~~~e~  307 (336)
T KOG2766|consen  244 SLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTREKDEEEL  307 (336)
T ss_pred             HhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeeccccCcHhh
Confidence            99999999999999999999999999988  56888899999999999999999997655544333

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=100.00  E-value=5e-31  Score=242.63  Aligned_cols=291  Identities=14%  Similarity=0.124  Sum_probs=222.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc---ccC---ccchHHHHHHHH
Q 017343            9 TKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR---QPL---KAKWYYYLILGL   82 (373)
Q Consensus         9 ~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~---~~~---~~~~~~~~~~g~   82 (373)
                      +||+.+.++.++.+=++.+....++|...+.+ .+|..+.++|+.+++++++++.+.++   +.+   ++.+..+.+.|+
T Consensus         8 ~~~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G-~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~   86 (358)
T PLN00411          8 WRREAVFLTAMLATETSVVGISTLFKVATSKG-LNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGF   86 (358)
T ss_pred             hhhccchHHHHHHHHHHHHHHHHHHHHHHHCC-CCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHH
Confidence            45577888888888899999999999998755 46788999999999999988865432   222   334456777788


Q ss_pred             HHHHHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHH------hccccceeeeehhhhheecceeeeeccCccC----
Q 017343           83 IDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIF------LKTKYRYKKITGVVVCVAGLVTVIFSDVHAG----  152 (373)
Q Consensus        83 ~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~------l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~----  152 (373)
                      ++...+.+++.|++|+++++++++.++.|+++.++++++      +|||+++++++|++++++|+.++...+....    
T Consensus        87 ~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~  166 (358)
T PLN00411         87 LGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVAS  166 (358)
T ss_pred             HHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccccc
Confidence            774446688999999999999999999999999999999      6999999999999999999998775322100    


Q ss_pred             -------------CCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhccCChh-HHHHHHHHHHHHHHHHHHHHhhccccc
Q 017343          153 -------------DRGSGSSPRKGDALVIAGATLYAVSNVSEEFLVKKADRI-ELMAFLGLFGGIISAVQISILERKELQ  218 (373)
Q Consensus       153 -------------~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (373)
                                   ......+...|++++++++++|++|++++|+..++.++. ..+++++.++.+...+.....+..+..
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~  246 (358)
T PLN00411        167 SPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPS  246 (358)
T ss_pred             ccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcc
Confidence                         000112224699999999999999999999998887654 566777777777665655554432211


Q ss_pred             c--ccccccch-hHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhh
Q 017343          219 S--IHWSAGAA-LPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLI  295 (373)
Q Consensus       219 ~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~  295 (373)
                      .  ..++...+ ..+.+. .+. +.|....+.+++.++..+++..+++|+++++++++++||++++.+++|+++|+.|++
T Consensus       247 ~~~~~~~~~~~~i~y~~i-~t~-lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~  324 (358)
T PLN00411        247 VWIIHFDITLITIVTMAI-ITS-VYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFY  324 (358)
T ss_pred             cceeccchHHHHHHHHHH-HHH-HHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHH
Confidence            1  11222221 222232 222 344566677799999999999999999999999999999999999999999999999


Q ss_pred             eeecCCC
Q 017343          296 IYSGGDK  302 (373)
Q Consensus       296 l~~~~~~  302 (373)
                      +..+.++
T Consensus       325 l~~~~~~  331 (358)
T PLN00411        325 AVMWGKA  331 (358)
T ss_pred             HHHhhhh
Confidence            9876443

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.97  E-value=3.9e-30  Score=234.59  Aligned_cols=276  Identities=9%  Similarity=0.071  Sum_probs=214.7

Q ss_pred             HHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHH--hc--ccCccchHHHHHHHHHHHHHHHHHHHHHh
Q 017343           21 FLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLY--RR--QPLKAKWYYYLILGLIDVEGNFLVVKAYQ   96 (373)
Q Consensus        21 ~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~--~~--~~~~~~~~~~~~~g~~~~~~~~~~~~al~   96 (373)
                      .+-++.......+|+..+ .+.+|..++++|+.++.+.+.+....  ++  +..+++++..+..|+++.....+.+.+++
T Consensus         9 ~w~~~~~~~~~~NK~~l~-~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~   87 (302)
T TIGR00817         9 LWYFLNVYFNIYNKKLLN-VFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHVTSNVSLS   87 (302)
T ss_pred             HHHHHHHHHHHHHHHHHh-hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            334444444556666665 46789999999999988776655211  11  34566788889999998666889999999


Q ss_pred             ccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCCCCCCchhhHHHHHHHHHHHH
Q 017343           97 YTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAV  176 (373)
Q Consensus        97 ~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~  176 (373)
                      |+++++++++.++.|+++++++++++|||++++++++++++++|+++....+        ......|++++++++++|++
T Consensus        88 ~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~--------~~~~~~G~~~~l~a~~~~a~  159 (302)
T TIGR00817        88 KVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTE--------LSFNWAGFLSAMISNITFVS  159 (302)
T ss_pred             hccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCc--------ccccHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999998764321        22235799999999999999


Q ss_pred             HHHHHHHHhc--cCChhHHHHHHHHHHHHHHHHHHHHhhccccccccc-------cccchh--HHHHHHHHHHHHHHHHH
Q 017343          177 SNVSEEFLVK--KADRIELMAFLGLFGGIISAVQISILERKELQSIHW-------SAGAAL--PFFGYALAMFLFYSFVP  245 (373)
Q Consensus       177 ~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~--~~~~~~~~~~~~~~~~~  245 (373)
                      +.++.||..+  +.|+...+.++...+.+.+.|.....++.+....++       ......  .+.....+...+|....
T Consensus       160 ~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (302)
T TIGR00817       160 RNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAF  239 (302)
T ss_pred             HHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999888  789999999999999988888776555432111111       111111  11222224445555555


Q ss_pred             HHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCCCCCC
Q 017343          246 ILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDKDDD  305 (373)
Q Consensus       246 ~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~  305 (373)
                      ..+++.++.+.++..+++|+++++++++++||+++..+++|+++++.|++++++.+++++
T Consensus       240 ~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~~~  299 (302)
T TIGR00817       240 MLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQKP  299 (302)
T ss_pred             HHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhccCc
Confidence            678999999999999999999999999999999999999999999999999987654433

specificities overlap.

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.97  E-value=8.9e-29  Score=224.29  Aligned_cols=282  Identities=16%  Similarity=0.122  Sum_probs=213.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc--ccCccchHHHHHHHHHHHH
Q 017343            9 TKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR--QPLKAKWYYYLILGLIDVE   86 (373)
Q Consensus         9 ~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~g~~~~~   86 (373)
                      .|+-+...+......++|++++...|...+  ..+|..++++|+.++.++++++...++  ...++++......|.++..
T Consensus         3 ~~~~~~~~~~~~~~~~iWg~~~~~~K~~~~--~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~   80 (292)
T PRK11272          3 FRQLLPLFGALFALYIIWGSTYLVIRIGVE--SWPPLMMAGVRFLIAGILLLAFLLLRGHPLPTLRQWLNAALIGLLLLA   80 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHhhHHHHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHH
Confidence            455555666777888999999999998764  678999999999999999888766554  2345566677777877654


Q ss_pred             H-HHHHHHHH-hccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCCCCCCchhh
Q 017343           87 G-NFLVVKAY-QYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGD  164 (373)
Q Consensus        87 ~-~~~~~~al-~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~  164 (373)
                      . +.+++.+. ++++++.++++.++.|+++++++++ +|||++++++++++++++|+.++..++.       ......|+
T Consensus        81 ~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~-------~~~~~~G~  152 (292)
T PRK11272         81 VGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGN-------LSGNPWGA  152 (292)
T ss_pred             HHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcc-------cccchHHH
Confidence            4 77778888 9999999999999999999999985 6999999999999999999998865321       11234799


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHH
Q 017343          165 ALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFV  244 (373)
Q Consensus       165 ~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (373)
                      +++++++++||.+.+..||..++ ++...+.++..++.+.+.+.....+.......+...+....+.+.. +....+...
T Consensus       153 l~~l~a~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~-~s~~~~~l~  230 (292)
T PRK11272        153 ILILIASASWAFGSVWSSRLPLP-VGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVF-GSIIAISAY  230 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCC-cchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHH-HHHHHHHHH
Confidence            99999999999999999997543 3455667777777777655544333221111111122222233322 222333444


Q ss_pred             HHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCCC
Q 017343          245 PILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDK  302 (373)
Q Consensus       245 ~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  302 (373)
                      .+..++.++..++...+++|+++++++++++||+++..+++|+++++.|+++.++.++
T Consensus       231 ~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~  288 (292)
T PRK11272        231 MYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY  288 (292)
T ss_pred             HHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            5556999999999999999999999999999999999999999999999999876443

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.97  E-value=1e-28  Score=224.15  Aligned_cols=278  Identities=13%  Similarity=0.094  Sum_probs=202.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhcccCccchHHHHHHHHHHHHH-HHHHH
Q 017343           14 LGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEG-NFLVV   92 (373)
Q Consensus        14 ~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~   92 (373)
                      +.++++....++|++++...|...+  ..+|..+.++|+.++.+++.++..  ++..++.+++..+.+.++... +.+++
T Consensus         4 ~~~l~~l~a~~~Wg~~~~~~k~~~~--~~~P~~~~~~R~~~a~l~l~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~   79 (295)
T PRK11689          4 KATLIGLIAILLWSTMVGLIRGVSE--SLGPVGGAAMIYSVSGLLLLLTVG--FPRLRQFPKRYLLAGGLLFVSYEICLA   79 (295)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHc--cCChHHHHHHHHHHHHHHHHHHcc--ccccccccHHHHHHHhHHHHHHHHHHH
Confidence            3456677888999999999998764  578999999999999988876532  222233344455555555555 66667


Q ss_pred             HHHhc----cchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCC-C--CCCCCCchhhH
Q 017343           93 KAYQY----TSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGD-R--GSGSSPRKGDA  165 (373)
Q Consensus        93 ~al~~----~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~-~--~~~~~~~~G~~  165 (373)
                      .+++|    .+++.++++.++.|+++.+++++++|||++++++++++++++|++++..++..... +  .+..+...|++
T Consensus        80 ~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~  159 (295)
T PRK11689         80 LSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYG  159 (295)
T ss_pred             HHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHH
Confidence            77754    67788899999999999999999999999999999999999999999875421100 0  01112346999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHH
Q 017343          166 LVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVP  245 (373)
Q Consensus       166 l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (373)
                      ++++++++||+|.++.||..++.++.....   ..+.+.+.+.... ++......++..+....+.+  ++....|....
T Consensus       160 ~~l~aa~~~A~~~v~~k~~~~~~~~~~~~~---~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~~--~~t~~~~~l~~  233 (295)
T PRK11689        160 LAFIGAFIWAAYCNVTRKYARGKNGITLFF---ILTALALWIKYFL-SPQPAMVFSLPAIIKLLLAA--AAMGFGYAAWN  233 (295)
T ss_pred             HHHHHHHHHHHHHHHHhhccCCCCchhHHH---HHHHHHHHHHHHH-hcCccccCCHHHHHHHHHHH--HHHHHHHHHHH
Confidence            999999999999999999887777765432   2223333232222 22211112222222222333  23344456667


Q ss_pred             HHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCC
Q 017343          246 ILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGD  301 (373)
Q Consensus       246 ~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  301 (373)
                      +.+++.++..++...+++|+++++++++++||+++..+++|+++|+.|+++....+
T Consensus       234 ~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~  289 (295)
T PRK11689        234 VGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLAT  289 (295)
T ss_pred             HHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhH
Confidence            77799999999999999999999999999999999999999999999998876544

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.96  E-value=2.5e-27  Score=215.55  Aligned_cols=274  Identities=15%  Similarity=0.108  Sum_probs=198.1

Q ss_pred             HHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhcccCccchHHHHHHHHHHHHH-HHHHHHHH
Q 017343           17 GLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEG-NFLVVKAY   95 (373)
Q Consensus        17 ~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~al   95 (373)
                      ++.+..+++|+.++...|...+  ..+|..++++|+.++++.++++..++    +.+++.....|++.... ..+++.++
T Consensus         7 l~~l~~~~~Wg~~~~~~k~~~~--~~~p~~~~~~R~~~a~~~l~~~~~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~   80 (299)
T PRK11453          7 VLALLVVVVWGLNFVVIKVGLH--NMPPLMLAGLRFMLVAFPAIFFVARP----KVPLNLLLGYGLTISFGQFAFLFCAI   80 (299)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHh--cCCHHHHHHHHHHHHHHHHHHHhcCC----CCchHHHHHHHHHHHHHHHHHHHHHH
Confidence            3456778999999999998764  57899999999999887666554322    22344455556655555 45667888


Q ss_pred             hc-cchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCCCCCCchhhHHHHHHHHHH
Q 017343           96 QY-TSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLY  174 (373)
Q Consensus        96 ~~-~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~  174 (373)
                      +| .+++.++++.++.|+++.+++++++|||++++++++++++++|+.++..++.+     ....+..|++++++++++|
T Consensus        81 ~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~-----~~~~~~~G~~l~l~aal~~  155 (299)
T PRK11453         81 NFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLN-----GQHVAMLGFMLTLAAAFSW  155 (299)
T ss_pred             HhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCC-----CcchhHHHHHHHHHHHHHH
Confidence            88 68899999999999999999999999999999999999999999998864321     1122347999999999999


Q ss_pred             HHHHHHHHHHhccCChh---HHHHHHHHHHHHHHHHHHHHhhcccc-----ccccccccchhHHHHHHHHHHHHHHHHHH
Q 017343          175 AVSNVSEEFLVKKADRI---ELMAFLGLFGGIISAVQISILERKEL-----QSIHWSAGAALPFFGYALAMFLFYSFVPI  246 (373)
Q Consensus       175 a~~~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (373)
                      +++.++.|+..++.++.   ....+.+..+.+...+.....+....     ...++..+....+++.+.+ ...|.....
T Consensus       156 a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t-~~~~~l~~~  234 (299)
T PRK11453        156 ACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVAT-IVGYGIWGT  234 (299)
T ss_pred             HHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence            99999999986654432   33445555544433333333332211     1112222222333332222 223344455


Q ss_pred             HHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCCC
Q 017343          247 LLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDK  302 (373)
Q Consensus       247 ~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  302 (373)
                      .+++.++...+...+++|+++.+++++++||+++..+++|++++++|+++..+.++
T Consensus       235 ~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~  290 (299)
T PRK11453        235 LLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR  290 (299)
T ss_pred             HHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence            56899999999999999999999999999999999999999999999998766443

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.96  E-value=4.3e-27  Score=213.30  Aligned_cols=275  Identities=15%  Similarity=0.077  Sum_probs=207.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc-ccCccchHHHHHHHHHHHHHHH
Q 017343           11 KTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR-QPLKAKWYYYLILGLIDVEGNF   89 (373)
Q Consensus        11 ~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~   89 (373)
                      .+.+++.+.++..++|+.++.+.|...+  ..+|..+.++|++++.++++++...++ +..+++++..+..|++....+.
T Consensus         9 ~~~~~~~~~~la~~~~~~~~~~~K~~~~--~~~~~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   86 (293)
T PRK10532          9 PVWLPILLLLIAMASIQSGASLAKSLFP--LVGAPGVTALRLALGTLILIAIFKPWRLRFAKEQRLPLLFYGVSLGGMNY   86 (293)
T ss_pred             ccchHHHHHHHHHHHHHhhHHHHHHHHH--HcCHHHHHHHHHHHHHHHHHHHHhHHhccCCHHHHHHHHHHHHHHHHHHH
Confidence            3477788888899999999999998875  468899999999999988887764433 3445677777788887666688


Q ss_pred             HHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCCCCCCchhhHHHHH
Q 017343           90 LVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIA  169 (373)
Q Consensus        90 ~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~l~l~  169 (373)
                      +++++++|++++.++++.++.|+++.+++    +||+++  +.++.++++|+.++..++.+.     +.....|++++++
T Consensus        87 ~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~--~~~~~i~~~Gv~li~~~~~~~-----~~~~~~G~ll~l~  155 (293)
T PRK10532         87 LFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVD--FVWVVLAVLGLWFLLPLGQDV-----SHVDLTGAALALG  155 (293)
T ss_pred             HHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHH--HHHHHHHHHHHheeeecCCCc-----ccCChHHHHHHHH
Confidence            88999999999999999999999998876    356554  455677889999887543211     2223579999999


Q ss_pred             HHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHHHHHh
Q 017343          170 GATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPILLK  249 (373)
Q Consensus       170 a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (373)
                      ++++|++|.+..|+..++.++... .+...++++++.+.....+..  ...++..+....+++. ++....|....+.++
T Consensus       156 aa~~~a~~~v~~r~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~l~lgv-~~t~~~~~l~~~~~~  231 (293)
T PRK10532        156 AGACWAIYILSGQRAGAEHGPATV-AIGSLIAALIFVPIGALQAGE--ALWHWSILPLGLAVAI-LSTALPYSLEMIALT  231 (293)
T ss_pred             HHHHHHHHHHHHHHHhccCCchHH-HHHHHHHHHHHHHHHHHccCc--ccCCHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence            999999999999999877777665 455566666665544332211  1112222111223332 223333345556669


Q ss_pred             hcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCCC
Q 017343          250 TNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDK  302 (373)
Q Consensus       250 ~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  302 (373)
                      +.++..+++..+++|+++.+++++++||+++..+++|+++|++|++...+..+
T Consensus       232 ~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~  284 (293)
T PRK10532        232 RLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIR  284 (293)
T ss_pred             hcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCC
Confidence            99999999999999999999999999999999999999999999999876543

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.96  E-value=6.9e-27  Score=216.24  Aligned_cols=280  Identities=12%  Similarity=0.040  Sum_probs=215.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc-c---c--CccchHHHHHHHHHHH
Q 017343           12 TLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR-Q---P--LKAKWYYYLILGLIDV   85 (373)
Q Consensus        12 ~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~-~---~--~~~~~~~~~~~g~~~~   85 (373)
                      .++...+...+-.+.......+|.+.+ ....|+.++++|++++.++...+...+. +   .  .+..++..+..|+++.
T Consensus        47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~-~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~  125 (350)
T PTZ00343         47 KWKLALLFLTWYALNVLYVVDNKLALN-MLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHL  125 (350)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence            344545444454555555555665554 3434999999999999876655433211 1   1  1335678889999998


Q ss_pred             HHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCCCCCCchhhH
Q 017343           86 EGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDA  165 (373)
Q Consensus        86 ~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~  165 (373)
                      ..+...+.|+++++++.++++.++.|+++++++++++|||++++++++++++++|+++....+.        .....|++
T Consensus       126 ~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~--------~~~~~G~~  197 (350)
T PTZ00343        126 FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKEL--------HFTWLAFW  197 (350)
T ss_pred             HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccc--------hhHHHHHH
Confidence            8877788999999999999999999999999999999999999999999999999999885332        22357999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhccC-------ChhHHHHHHHHHHHHHHHHHHHHhhcccccc------cccccc----chh
Q 017343          166 LVIAGATLYAVSNVSEEFLVKKA-------DRIELMAFLGLFGGIISAVQISILERKELQS------IHWSAG----AAL  228 (373)
Q Consensus       166 l~l~a~~~~a~~~v~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~----~~~  228 (373)
                      ++++|++++++++++.|+..++.       ++.....++.+.++++++|.....|......      .++...    .+.
T Consensus       198 ~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~  277 (350)
T PTZ00343        198 CAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIF  277 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHH
Confidence            99999999999999999988643       4555667778889888888776565421110      011111    111


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecC
Q 017343          229 PFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGG  300 (373)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~  300 (373)
                      .++..++.++++|...+..+++.++...++..+++|+++++++++++||++++.+++|+++++.|+++|++.
T Consensus       278 ~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~  349 (350)
T PTZ00343        278 KIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLF  349 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence            233456667777777778899999999999999999999999999999999999999999999999998753

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.96  E-value=8.7e-27  Score=208.34  Aligned_cols=257  Identities=18%  Similarity=0.160  Sum_probs=199.4

Q ss_pred             HHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhcccCccchHHHHHHHHHHHHH-HHHHHHHHhccchhHHH
Q 017343           26 ITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEG-NFLVVKAYQYTSLTSVM  104 (373)
Q Consensus        26 ~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~al~~~~~~~~~  104 (373)
                      |+.++...|...+ +..+|....+.|++.+.+++.++...+  ..+++++.....|.++... +.+++.|++|+++++++
T Consensus         1 Wg~~~~~~k~~~~-~~~~~~~~~~~r~~~~~l~l~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~   77 (260)
T TIGR00950         1 WGTTGVVIGQYLE-GQVPLYFAVFRRLIFALLLLLPLLRRR--PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAA   77 (260)
T ss_pred             CcchHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHhc--cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhH
Confidence            6778888888765 356788888999888888777765544  4556677778888877666 78889999999999999


Q ss_pred             HhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHH
Q 017343          105 LLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVSEEFL  184 (373)
Q Consensus       105 ~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~  184 (373)
                      ++.++.|+++++++.+++|||+++++++++.++++|+.++..++.       ......|+++++.++++|+.+.++.|+.
T Consensus        78 ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~-------~~~~~~G~~~~l~a~~~~a~~~~~~k~~  150 (260)
T TIGR00950        78 LLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGN-------LSINPAGLLLGLGSGISFALGTVLYKRL  150 (260)
T ss_pred             HHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCc-------ccccHHHHHHHHHHHHHHHHHHHHHhHH
Confidence            999999999999999999999999999999999999999875431       2234689999999999999999999998


Q ss_pred             hccCCh--hHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 017343          185 VKKADR--IELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLT  262 (373)
Q Consensus       185 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~  262 (373)
                      .++.++  .....+.+.++.+++.+.....+...  ..+...+....+.+ .++....+....+..++.++..++...++
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~~~~~s~~~~~  227 (260)
T TIGR00950       151 VKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP--QALSLQWGALLYLG-LIGTALAYFLWNKGLTLVDPSAASILALA  227 (260)
T ss_pred             hhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC--CcchHHHHHHHHHH-HHHHHHHHHHHHHHHhcCCchHHHHHHHH
Confidence            877774  34555677788777766654433221  11111111122222 22222333444556699999999999999


Q ss_pred             HHHHHHHHHHHHhcccccHHHHHHHHHHHHHhh
Q 017343          263 SDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLI  295 (373)
Q Consensus       263 ~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~  295 (373)
                      +|+++++++++++||+++..+++|+++++.|+.
T Consensus       228 ~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~  260 (260)
T TIGR00950       228 EPLVALLLGLLILGETLSLPQLIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence            999999999999999999999999999999863

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.95  E-value=2.2e-26  Score=208.99  Aligned_cols=272  Identities=14%  Similarity=0.080  Sum_probs=195.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhcc--c---CccchH--HHHHHH
Q 017343            9 TKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQ--P---LKAKWY--YYLILG   81 (373)
Q Consensus         9 ~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~--~---~~~~~~--~~~~~g   81 (373)
                      .+++.++.++..+.+++|+..+...|...   ..+|..++++|++++.+++.++...+++  .   ..++++  .....+
T Consensus         3 ~~~~~~g~~~~l~a~~~wg~~~~~~k~~~---~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (296)
T PRK15430          3 AKQTRQGVLLALAAYFIWGIAPAYFKLIY---YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVS   79 (296)
T ss_pred             chhhhhHHHHHHHHHHHHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHH
Confidence            34567889999999999999999998752   3679999999999999877776544321  1   011122  223355


Q ss_pred             HHHHHH-HHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCCCCCC
Q 017343           82 LIDVEG-NFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSP  160 (373)
Q Consensus        82 ~~~~~~-~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~  160 (373)
                      .++... +.++++|++++++++++++.++.|+++++++++++|||+++++|++++++++|++++..++.        +. 
T Consensus        80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~--------~~-  150 (296)
T PRK15430         80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFG--------SL-  150 (296)
T ss_pred             HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcC--------Cc-
Confidence            555554 88999999999999999999999999999999999999999999999999999999875321        11 


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhccCC--hhHHHHHHHHHHHHHHHHHHHHhhcccccccccccc-chhHHHHHHHHH
Q 017343          161 RKGDALVIAGATLYAVSNVSEEFLVKKAD--RIELMAFLGLFGGIISAVQISILERKELQSIHWSAG-AALPFFGYALAM  237 (373)
Q Consensus       161 ~~G~~l~l~a~~~~a~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  237 (373)
                         ..++++++++|++|.++.|+..++..  ....+.+...++.+...+   ..+.. ......... .+..+...++..
T Consensus       151 ---~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~g~~t  223 (296)
T PRK15430        151 ---PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFA---IADSS-TSHMGQNPMSLNLLLIAAGIVT  223 (296)
T ss_pred             ---cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHH---HccCC-cccccCCcHHHHHHHHHHHHHH
Confidence               15688899999999999998754322  223334444444433211   11111 111111111 112222212223


Q ss_pred             HHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeec
Q 017343          238 FLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSG  299 (373)
Q Consensus       238 ~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  299 (373)
                      ...+.+..+..++.++..++...+++|+++++++++++||++++.+++|+++|+.|+.+...
T Consensus       224 ~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~  285 (296)
T PRK15430        224 TVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVM  285 (296)
T ss_pred             HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            34445667777999999999999999999999999999999999999999999888776653

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.92  E-value=6.9e-24  Score=191.34  Aligned_cols=268  Identities=15%  Similarity=0.114  Sum_probs=183.0

Q ss_pred             HHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHh--c---ccCccchHHHHHHHH-HHHHHHH
Q 017343           16 LGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYR--R---QPLKAKWYYYLILGL-IDVEGNF   89 (373)
Q Consensus        16 ~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~--~---~~~~~~~~~~~~~g~-~~~~~~~   89 (373)
                      +.+.++.+++++......|...++  .++.  .+++.....+++.++...+  +   +..+++++.....+. .+.....
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~--~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADK--EPDF--LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFL   78 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCc--hhHH--HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHH
Confidence            456777888888888888855432  2333  4666666777777765543  1   233344454444444 4445588


Q ss_pred             HHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCCCCCCchhhHHHHH
Q 017343           90 LVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIA  169 (373)
Q Consensus        90 ~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~l~l~  169 (373)
                      +++.|+++.+++.++++.++.|+++.+++++++|||+++++|+|+.++++|++++..++..       .....|+.++++
T Consensus        79 ~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~-------~~~~~g~~~~l~  151 (281)
T TIGR03340        79 GLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFA-------QHRRKAYAWALA  151 (281)
T ss_pred             HHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccccc-------ccchhHHHHHHH
Confidence            8899999999999999999999999999999999999999999999999999988764321       122368889999


Q ss_pred             HHHHHHHHHHHHHHHhccCChhH----HHHHHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHH
Q 017343          170 GATLYAVSNVSEEFLVKKADRIE----LMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVP  245 (373)
Q Consensus       170 a~~~~a~~~v~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (373)
                      ++++|++|.+..|+..++.++..    .+.+......+...+.....+........+.. ....+.+ ++.....|....
T Consensus       152 aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~s~l~~~l~~  229 (281)
T TIGR03340       152 AALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSMFPYARQI-LPSATLG-GLMIGGAYALVL  229 (281)
T ss_pred             HHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhccchhhhHHHH-HHHHHHH-HHHHHHHHHHHH
Confidence            99999999999987655444332    22222222211111111111111110111111 1112222 222233334555


Q ss_pred             HHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhhe
Q 017343          246 ILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLII  296 (373)
Q Consensus       246 ~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l  296 (373)
                      +.+++.++...+...+++|+++.+++++++||+++..+++|++++++|+++
T Consensus       230 ~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       230 WAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            666899999999999999999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.92  E-value=1.9e-22  Score=183.75  Aligned_cols=280  Identities=20%  Similarity=0.218  Sum_probs=221.6

Q ss_pred             HHHHHHHhhHHHHhccCC--CcHHHHHHHHHHHHHHHHHHHHHhc--ccCccchHHHHHHHHHHHHHHHHHHHHHhccch
Q 017343           25 LITSTGFSSSELARKGIN--APTSQSFFNYVLLAIVYGSLMLYRR--QPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSL  100 (373)
Q Consensus        25 ~~~~~~~~~~~l~~~~~~--~p~~~~~~r~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~  100 (373)
                      ..+..+.....+.+..+.  .|..+++..+....++..+.....+  +..+.+++.++..+++......+.+.|++|++.
T Consensus        11 ~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~   90 (303)
T PF08449_consen   11 GCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPKSRKIPLKKYAILSFLFFLASVLSNAALKYISY   90 (303)
T ss_pred             HHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccCCCcChHHHHHHHHHHHHHHHHHHHHHHHhCCh
Confidence            334455666666655444  4899999999988877766544433  566788899999999999999999999999999


Q ss_pred             hHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCCC--CCCchhhHHHHHHHHHHHHHH
Q 017343          101 TSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSG--SSPRKGDALVIAGATLYAVSN  178 (373)
Q Consensus       101 ~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~--~~~~~G~~l~l~a~~~~a~~~  178 (373)
                      +...+++++.|+++++++.+++|+|++++++.++++..+|+++....+.........  .+...|+++.+.+.++.++..
T Consensus        91 p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~  170 (303)
T PF08449_consen   91 PTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTG  170 (303)
T ss_pred             HHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999877543332211  222359999999999999999


Q ss_pred             HHHHHHhcc--CChhHHHHHHHHHHHHHHHHHHHHhh--cc-cccc-ccccccchhHHHHHHHHHHHHHHHHHHHHhhcc
Q 017343          179 VSEEFLVKK--ADRIELMAFLGLFGGIISAVQISILE--RK-ELQS-IHWSAGAALPFFGYALAMFLFYSFVPILLKTNG  252 (373)
Q Consensus       179 v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (373)
                      +++++..++  .++.+.+++..+++.++..+.....+  .. +... ....+..+..++...++............++.+
T Consensus       171 ~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g~~~i~~~~~~~~  250 (303)
T PF08449_consen  171 VYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALGQFFIFYLIKKFS  250 (303)
T ss_pred             HHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            999999874  45888999999999998876665522  11 1111 112222334444455555555566667779999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCCCCC
Q 017343          253 ATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDKDD  304 (373)
Q Consensus       253 a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~  304 (373)
                      +...+++..++.+++++++++++++++++.+|+|.++++.|..++.+.++++
T Consensus       251 al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~  302 (303)
T PF08449_consen  251 ALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK  302 (303)
T ss_pred             chhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence            9999999999999999999999999999999999999999999999876654

; GO: 0055085 transmembrane transport

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.90  E-value=1.5e-21  Score=177.17  Aligned_cols=280  Identities=20%  Similarity=0.225  Sum_probs=197.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc---ccCccchHHHHHHHHHHHH
Q 017343           10 KKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR---QPLKAKWYYYLILGLIDVE   86 (373)
Q Consensus        10 ~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~g~~~~~   86 (373)
                      ++...+.....+.++.|+......+...+. ..++....+.|...+.+.+.+....++   ...+.+++...+.+.++..
T Consensus         3 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (292)
T COG0697           3 RALLLGLLALLLWGLLWGLSFIALKLAVES-LDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLA   81 (292)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCChHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHH
Confidence            344556666667778888888888877653 345566667798888887444443332   2222223445555555555


Q ss_pred             H-HHHHHHHHhccchhHHHHhhcchhhHHHHHHH-HHhccccceeeeehhhhheecceeeeeccCccCCCCCCCCCchhh
Q 017343           87 G-NFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTW-IFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGD  164 (373)
Q Consensus        87 ~-~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~-~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~  164 (373)
                      . ..+++.++++++++.++++.++.|+++.++++ +++|||++++++++++++++|++++..++.....    . ...|+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~----~-~~~g~  156 (292)
T COG0697          82 LPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGI----L-SLLGL  156 (292)
T ss_pred             HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchh----H-HHHHH
Confidence            5 88889999999999999999999999999997 7779999999999999999999999987653110    0 46899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccCChhHHHH-HHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHH
Q 017343          165 ALVIAGATLYAVSNVSEEFLVKKADRIELMA-FLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSF  243 (373)
Q Consensus       165 ~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (373)
                      .+++.++++++++.+..|+.. +.++..... ++.. ..... .........+ .+..+..+....+.+..... ..+..
T Consensus       157 ~~~l~a~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~-i~~~~  231 (292)
T COG0697         157 LLALAAALLWALYTALVKRLS-RLGPVTLALLLQLL-LALLL-LLLFFLSGFG-APILSRAWLLLLYLGVFSTG-LAYLL  231 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHH-HHHHH-HHHHHhcccc-ccCCHHHHHHHHHHHHHHHH-HHHHH
Confidence            999999999999999999987 666655555 3333 22211 1111111111 11111112222222222221 23344


Q ss_pred             HHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecC
Q 017343          244 VPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGG  300 (373)
Q Consensus       244 ~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~  300 (373)
                      .....+..++...+...+++|++++++++++++|+++..+++|+++++.|+++...+
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         232 WYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            455569999999999999999999999999999999999999999999999998765

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.90  E-value=6.8e-23  Score=182.34  Aligned_cols=278  Identities=13%  Similarity=0.179  Sum_probs=227.4

Q ss_pred             HHHHHHHHHHHHHhhHHHHhc-cCCCcHHHHHHHHHHHHHHHHHHHHHhc-c----cCccchHHHHHHHHHHHHHHHHHH
Q 017343           19 GQFLSLLITSTGFSSSELARK-GINAPTSQSFFNYVLLAIVYGSLMLYRR-Q----PLKAKWYYYLILGLIDVEGNFLVV   92 (373)
Q Consensus        19 ~~~~~l~~~~~~~~~~~l~~~-~~~~p~~~~~~r~~~~~~~l~~~~~~~~-~----~~~~~~~~~~~~g~~~~~~~~~~~   92 (373)
                      ..++..+.......+|+..+. ++..|.+++.++..++.+.+......+. +    ..+..++..+.+|++...+.++.+
T Consensus        22 ~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~~~~~v~~n  101 (316)
T KOG1441|consen   22 FAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVFCISHVLGN  101 (316)
T ss_pred             HHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHHHHHHHhcc
Confidence            333333334444456766655 7889999999988888877766544443 1    234678899999999999999999


Q ss_pred             HHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCCCCCCchhhHHHHHHHH
Q 017343           93 KAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGAT  172 (373)
Q Consensus        93 ~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~l~l~a~~  172 (373)
                      .|+.+.+++.+++++.+.|+++.++++++.+|+.++..+.+++....||.+....+.        .-+..|.+.++++.+
T Consensus       102 ~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~--------~fn~~G~i~a~~s~~  173 (316)
T KOG1441|consen  102 VSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTEL--------SFNLFGFISAMISNL  173 (316)
T ss_pred             hhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccc--------cccHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999998553        345699999999999


Q ss_pred             HHHHHHHHHHHHhc----cCChhHHHHHHHHHHHHHHH-HHHHHhhcccc---ccccccccchhHHHHHHHHHHHHHHHH
Q 017343          173 LYAVSNVSEEFLVK----KADRIELMAFLGLFGGIISA-VQISILERKEL---QSIHWSAGAALPFFGYALAMFLFYSFV  244 (373)
Q Consensus       173 ~~a~~~v~~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (373)
                      ..++.+++.++..+    +.|+.+++.++..++.++++ |.....++...   ...+|+......++.. ++.+..|...
T Consensus       174 ~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-v~~f~~Nls~  252 (316)
T KOG1441|consen  174 AFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLLNS-VLAFLLNLSA  252 (316)
T ss_pred             HHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHHHH-HHHHHHHHHH
Confidence            99999999999984    46799999999999999998 55555454433   2223443333333333 7788889999


Q ss_pred             HHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCCCCCC
Q 017343          245 PILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDKDDD  305 (373)
Q Consensus       245 ~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~  305 (373)
                      +.++.+++|...++.+.++-++.++.++++|+++.|+.+.+|+++.+.|+++|++.+.+++
T Consensus       253 f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~  313 (316)
T KOG1441|consen  253 FLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEK  313 (316)
T ss_pred             HHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhh
Confidence            9999999999999999999999999999999999999999999999999999998665443

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.90  E-value=4.8e-25  Score=184.70  Aligned_cols=284  Identities=15%  Similarity=0.198  Sum_probs=214.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc---ccCccchHHHHHHHHHHHHH
Q 017343           11 KTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR---QPLKAKWYYYLILGLIDVEG   87 (373)
Q Consensus        11 ~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~g~~~~~~   87 (373)
                      ....++.+..+..++-.++....+.+    ...|..+.-.|++.-.++..+...+++   .-++...+.++++|+.|+.+
T Consensus        35 ~p~~gl~l~~vs~ff~~~~vv~t~~~----e~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R~~LiLRg~mG~tg  110 (346)
T KOG4510|consen   35 KPNLGLLLLTVSYFFNSCMVVSTKVL----ENDPMELASFRLLVRMLITYPCLIYYMQPVIGPEGKRKWLILRGFMGFTG  110 (346)
T ss_pred             CCccCceehhhHHHHhhHHHhhhhhh----ccChhHhhhhhhhhehhhhheEEEEEeeeeecCCCcEEEEEeehhhhhhH
Confidence            33445555444433333333333333    346888888887777766666655554   12333344577889999999


Q ss_pred             HHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCC------CCCCCc
Q 017343           88 NFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRG------SGSSPR  161 (373)
Q Consensus        88 ~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~------~~~~~~  161 (373)
                      .++.|+|++|++.+.++++.+.+|+++.+++++++|||.++...++..+.+.||++++.+..--+++.      +...+.
T Consensus       111 vmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~  190 (346)
T KOG4510|consen  111 VMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDI  190 (346)
T ss_pred             HHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccC
Confidence            99999999999999999999999999999999999999999999999999999999998765333322      223456


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHH
Q 017343          162 KGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFY  241 (373)
Q Consensus       162 ~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (373)
                      .|.+.++.+.++.|...++.|++.|+.+....+.|..+++.+...+.....+...+|+-..++   ++++-.++..+..+
T Consensus       191 ~gt~aai~s~lf~asvyIilR~iGk~~h~~msvsyf~~i~lV~s~I~~~~ig~~~lP~cgkdr---~l~~~lGvfgfigQ  267 (346)
T KOG4510|consen  191 PGTVAAISSVLFGASVYIILRYIGKNAHAIMSVSYFSLITLVVSLIGCASIGAVQLPHCGKDR---WLFVNLGVFGFIGQ  267 (346)
T ss_pred             CchHHHHHhHhhhhhHHHHHHHhhccccEEEEehHHHHHHHHHHHHHHhhccceecCccccce---EEEEEehhhhhHHH
Confidence            899999999999999999999999999988778888888888776665544433333222222   22222233445566


Q ss_pred             HHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCC
Q 017343          242 SFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGD  301 (373)
Q Consensus       242 ~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  301 (373)
                      .+....++...|...++..++..+++.++.+++|||.||++.|+|+++++.+.+.....+
T Consensus       268 IllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~k  327 (346)
T KOG4510|consen  268 ILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKK  327 (346)
T ss_pred             HHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHH
Confidence            677777899999999999999999999999999999999999999999999988766533

>TIGR00688 rarD rarD protein

Probab=99.89  E-value=1.8e-21  Score=173.41  Aligned_cols=242  Identities=14%  Similarity=-0.021  Sum_probs=168.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc---------c-cCccc-hHHHHHHHH
Q 017343           14 LGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR---------Q-PLKAK-WYYYLILGL   82 (373)
Q Consensus        14 ~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~---------~-~~~~~-~~~~~~~g~   82 (373)
                      +|.++..+.+++|+..+.+.|.+.   ..+|.+++++|++++.+++.+++..++         + ..+++ +......|+
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~~---~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   78 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLLK---PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL   78 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHhc---cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH
Confidence            467788889999999999999842   368999999999999988776543221         1 11222 223555666


Q ss_pred             HHHHHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCCCCCCch
Q 017343           83 IDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRK  162 (373)
Q Consensus        83 ~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~  162 (373)
                      +....+.+++.|++++++++++++.++.|+++++++++++|||+++++|++++++++|++++..++.        ..   
T Consensus        79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~--------~~---  147 (256)
T TIGR00688        79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKG--------SL---  147 (256)
T ss_pred             HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcC--------Cc---
Confidence            6666688999999999999999999999999999999999999999999999999999998765321        11   


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccccc-ccchhHHHHHHHHHHHHH
Q 017343          163 GDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWS-AGAALPFFGYALAMFLFY  241 (373)
Q Consensus       163 G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  241 (373)
                       ..++++++++|++|.+..|+..++ +....... ......+..+.....+.......+.. .+.+..+.+. . ....|
T Consensus       148 -~~~~l~aa~~~a~~~i~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~-~-t~i~~  222 (256)
T TIGR00688       148 -PWEALVLAFSFTAYGLIRKALKNT-DLAGFCLE-TLSLMPVAIYYLLQTDFATVQQTNPFPIWLLLVLAGL-I-TGTPL  222 (256)
T ss_pred             -hHHHHHHHHHHHHHHHHHhhcCCC-CcchHHHH-HHHHHHHHHHHHHHhccCcccccCchhHHHHHHHHHH-H-HHHHH
Confidence             146789999999999999987543 32222211 11111121111111111111111111 2222333332 2 33455


Q ss_pred             HHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHH
Q 017343          242 SFVPILLKTNGATMLNLSLLTSDMWAVLIRIGA  274 (373)
Q Consensus       242 ~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~  274 (373)
                      .+....+++.++..++...+++|+++.++++++
T Consensus       223 ~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       223 LAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            666777899999999999999999999999864

This uncharacterized protein is predicted to have many membrane-spanning domains.

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.89  E-value=3.2e-21  Score=169.62  Aligned_cols=223  Identities=21%  Similarity=0.257  Sum_probs=186.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCC
Q 017343           77 YLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGS  156 (373)
Q Consensus        77 ~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~  156 (373)
                      .+....+.+..++.++.||.+++++..+++.+++.+|+..++.++..||++..+.+++++.+.|+++++..+..++++..
T Consensus       162 sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~  241 (416)
T KOG2765|consen  162 SLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLP  241 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCC
Confidence            34556677777999999999999999999999999999999999999999999999999999999999998876665556


Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHHHHhccC----ChhHHHHHHHHHHHHHHHHHHHHhhccccccccccc------cc
Q 017343          157 GSSPRKGDALVIAGATLYAVSNVSEEFLVKKA----DRIELMAFLGLFGGIISAVQISILERKELQSIHWSA------GA  226 (373)
Q Consensus       157 ~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~  226 (373)
                      .....+|.++++++++.||+|.++.||...+.    |.-.+.++.+++..+++.|...+.+....+.++.+.      ..
T Consensus       242 a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv  321 (416)
T KOG2765|consen  242 ASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVV  321 (416)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeee
Confidence            66778999999999999999999999987655    344577888888888888877776655444443332      22


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCCCC
Q 017343          227 ALPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDKD  303 (373)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~  303 (373)
                      ...+++.+++-++|-.+.    -.+++.++.+.+.++.+++++.+.++-|..+++.+++|.+.|++|.++.++....
T Consensus       322 ~~~ligtvvSDylW~~a~----~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~~  394 (416)
T KOG2765|consen  322 FNNLIGTVVSDYLWAKAV----LLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSEN  394 (416)
T ss_pred             HhhHHHHHHHHHHHHHHH----HhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccccc
Confidence            233667777777775554    6788999999999999999999999999999999999999999999999986543

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.87  E-value=1.3e-19  Score=151.28  Aligned_cols=264  Identities=17%  Similarity=0.068  Sum_probs=206.7

Q ss_pred             HHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc-ccCccchHHHHHHHHHHHHHHHHHHHHHhccchhH
Q 017343           24 LLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR-QPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTS  102 (373)
Q Consensus        24 l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~  102 (373)
                      +.......+.|.+.  ....|.-.+.+|..++.++++.+++..+ +..+++|...+..|+.....|.++|.+++.+|.+.
T Consensus        22 vsiq~Gas~Ak~LF--P~vG~~g~t~lRl~~aaLIll~l~RPwr~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGi   99 (292)
T COG5006          22 VSIQSGASFAKSLF--PLVGAAGVTALRLAIAALILLALFRPWRRRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGI   99 (292)
T ss_pred             HHHHhhHHHHHHHc--cccChhhHHHHHHHHHHHHHHHHhhHHHhccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchh
Confidence            33444445555555  3566889999999999999988776544 77788899999999988888999999999999999


Q ss_pred             HHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHH
Q 017343          103 VMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVSEE  182 (373)
Q Consensus       103 ~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~  182 (373)
                      +..+.++.|+.+.+++.    +  +.+..+.+.+++.|+.++.-.+...     ...+..|..+++.++.||++|.+..+
T Consensus       100 AVAiEF~GPL~vA~~~s----R--r~~d~vwvaLAvlGi~lL~p~~~~~-----~~lDp~Gv~~Al~AG~~Wa~YIv~G~  168 (292)
T COG5006         100 AVAIEFTGPLAVALLSS----R--RLRDFVWVALAVLGIWLLLPLGQSV-----WSLDPVGVALALGAGACWALYIVLGQ  168 (292)
T ss_pred             hhhhhhccHHHHHHHhc----c--chhhHHHHHHHHHHHHhheeccCCc-----CcCCHHHHHHHHHHhHHHHHHHHHcc
Confidence            99999999999987653    2  3345556666778888877533211     23345999999999999999999999


Q ss_pred             HHhccCChhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhH-HHHHHHHHHHHHHHHHHHHhhcchhHHHHHHH
Q 017343          183 FLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALP-FFGYALAMFLFYSFVPILLKTNGATMLNLSLL  261 (373)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~  261 (373)
                      |..+..+...-+..-+.+++++..|+.....+..+    +++..... +...+++...-|.+....+++.+....+....
T Consensus       169 r~g~~~~g~~g~a~gm~vAaviv~Pig~~~ag~~l----~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlS  244 (292)
T COG5006         169 RAGRAEHGTAGVAVGMLVAALIVLPIGAAQAGPAL----FSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLS  244 (292)
T ss_pred             hhcccCCCchHHHHHHHHHHHHHhhhhhhhcchhh----cChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHH
Confidence            99887777788888888888888777653333221    22222222 33345567778888888999999999999999


Q ss_pred             HHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCCCCC
Q 017343          262 TSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDKDD  304 (373)
Q Consensus       262 ~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~  304 (373)
                      +||.++.+.|++++||.+|+.||+|+++|+.+..-..+..|++
T Consensus       245 LePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~~  287 (292)
T COG5006         245 LEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARKP  287 (292)
T ss_pred             hhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCCC
Confidence            9999999999999999999999999999999998777655443

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.82  E-value=2.1e-18  Score=155.73  Aligned_cols=271  Identities=13%  Similarity=0.060  Sum_probs=185.1

Q ss_pred             HHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhcccC---ccchHHHHHHHHHHHHHHHHH
Q 017343           15 GLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQPL---KAKWYYYLILGLIDVEGNFLV   91 (373)
Q Consensus        15 ~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~   91 (373)
                      ++++.++.+++|++.+...|...  +. ++.+..  |..++.+++..+....+.+.   +..+..-.+.|+....++.++
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~--g~-~~~~~~--~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~l~G~~w~ig~~~~   76 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG--GG-PYSQTL--GTTFGALILSIAIAIFVLPEFWALSIFLVGLLSGAFWALGQINQ   76 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC--CC-HHHHHH--HHHHHHHHHHHHHHHHhCCcccccHHHHHHHHHHHHHHhhhhhH
Confidence            46677888899999999999765  32 333333  66666666554433322111   112222334444455558999


Q ss_pred             HHHHhccchhHHHHhhc-chhhHHHHHHHHHhccccceee----eehhhhheecceeeeeccCccCCCCCCCCCchhhHH
Q 017343           92 VKAYQYTSLTSVMLLDC-WTIPCVMFLTWIFLKTKYRYKK----ITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDAL  166 (373)
Q Consensus        92 ~~al~~~~~~~~~~i~~-~~p~~~~ll~~~~l~e~~~~~~----~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~l  166 (373)
                      +.|.++++++.+..+.+ +.+++..+++.+++|||.++++    ++|++++++|++++...+.+..+++...+...|+++
T Consensus        77 ~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~~  156 (290)
T TIGR00776        77 FKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGILL  156 (290)
T ss_pred             HHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHHH
Confidence            99999999999999988 8888888999999999999999    999999999999987754321110000233579999


Q ss_pred             HHHHHHHHHHHHHHHHHHhccCChhHHHHHHHH---HHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHH
Q 017343          167 VIAGATLYAVSNVSEEFLVKKADRIELMAFLGL---FGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSF  243 (373)
Q Consensus       167 ~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (373)
                      +++++++|++|.+..|..  +.+|....+.+..   .++++.....  ....   +..........+.|..  ....|..
T Consensus       157 ~l~sg~~y~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~Gi~--~~ia~~~  227 (290)
T TIGR00776       157 LLMSTIGYLVYVVVAKAF--GVDGLSVLLPQAIGMVIGGIIFNLGH--ILAK---PLKKYAILLNILPGLM--WGIGNFF  227 (290)
T ss_pred             HHHHHHHHHHHHHHHHHc--CCCcceehhHHHHHHHHHHHHHHHHH--hccc---chHHHHHHHHHHHHHH--HHHHHHH
Confidence            999999999999999975  4788877444443   3333322222  1001   1111111111222221  2233333


Q ss_pred             HHHHHh-hcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHH----HHHHHHHHHhheeec
Q 017343          244 VPILLK-TNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYF----IAFAAVAVGLIIYSG  299 (373)
Q Consensus       244 ~~~~~~-~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~----~G~~li~~g~~l~~~  299 (373)
                      .....+ +.++...+...+.+|+.+.+++++++||..+..++    +|+++++.|+.+...
T Consensus       228 y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       228 YLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             HHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence            334446 89999999999999999999999999999999999    999999999987643

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.82  E-value=1.8e-18  Score=148.62  Aligned_cols=271  Identities=16%  Similarity=0.094  Sum_probs=195.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc-----ccCccchHHH--HHHHH
Q 017343           10 KKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR-----QPLKAKWYYY--LILGL   82 (373)
Q Consensus        10 ~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~-----~~~~~~~~~~--~~~g~   82 (373)
                      |+..+|+++++...++|+......|.+.   ..++.++...|.+.+..+++..+...+     +...++++.+  +..+.
T Consensus         3 ~~~~~Gil~~l~Ay~lwG~lp~y~kll~---~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a   79 (293)
T COG2962           3 KDSRKGILLALLAYLLWGLLPLYFKLLE---PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTA   79 (293)
T ss_pred             CcccchhHHHHHHHHHHHHHHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHH
Confidence            5567899999999999999999999886   567889999999988877766543322     1112222222  22333


Q ss_pred             HHHHHHHH-HHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCCCCCCc
Q 017343           83 IDVEGNFL-VVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPR  161 (373)
Q Consensus        83 ~~~~~~~~-~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~  161 (373)
                      +.+..|+. +.+|.++..+-++++=++.+|++.++++.+++|||+++.||+++.++.+||...+...+        +-+ 
T Consensus        80 ~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g--------~lp-  150 (293)
T COG2962          80 LLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLG--------SLP-  150 (293)
T ss_pred             HHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcC--------CCc-
Confidence            33444554 45999999999999999999999999999999999999999999999999999887442        122 


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhH--HHHHHH--HH
Q 017343          162 KGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALP--FFGYAL--AM  237 (373)
Q Consensus       162 ~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~  237 (373)
                         ..++.=++.|++|..+-|+.  +.|+.+-.....+.-...........+..+......++..+..  ..|.+.  ..
T Consensus       151 ---wval~la~sf~~Ygl~RK~~--~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~aG~vTavpL  225 (293)
T COG2962         151 ---WVALALALSFGLYGLLRKKL--KVDALTGLTLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLLVLAGLVTAVPL  225 (293)
T ss_pred             ---HHHHHHHHHHHHHHHHHHhc--CCchHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHhhHHHHHHH
Confidence               34566688999999877664  4666666655555555555444444443321011122222222  233222  23


Q ss_pred             HHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCC
Q 017343          238 FLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGD  301 (373)
Q Consensus       238 ~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  301 (373)
                      .++    ...-++.+-.+.++.+|.+|..-.+++++++||+++..++...+.|-+|++++..+.
T Consensus       226 ~lf----~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~  285 (293)
T COG2962         226 LLF----AAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDG  285 (293)
T ss_pred             HHH----HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            333    333489999999999999999999999999999999999999999999999988643

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.81  E-value=2.9e-17  Score=145.24  Aligned_cols=286  Identities=15%  Similarity=0.130  Sum_probs=211.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhHHHHhcc--CCCcHHHHHHHHHHHHHHHHHHHHHh-----c----------ccCccchHH
Q 017343           14 LGLGLGQFLSLLITSTGFSSSELARKG--INAPTSQSFFNYVLLAIVYGSLMLYR-----R----------QPLKAKWYY   76 (373)
Q Consensus        14 ~~~~l~~~~~l~~~~~~~~~~~l~~~~--~~~p~~~~~~r~~~~~~~l~~~~~~~-----~----------~~~~~~~~~   76 (373)
                      .-.+..++..+-+++.-...++..+.+  ...|...+++--.+-.++....+...     +          ...+++..+
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk   94 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK   94 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence            344444566677777777777776543  23456667666666665555443332     1          112234456


Q ss_pred             HHHHHHHHHHHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCC---
Q 017343           77 YLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGD---  153 (373)
Q Consensus        77 ~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~---  153 (373)
                      +.+.+++...-|.++|.++.+.+++.+++..++..+.++++..+++++|++++||.++++.++|+.++..+.....+   
T Consensus        95 ~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~  174 (345)
T KOG2234|consen   95 VSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKS  174 (345)
T ss_pred             HHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccC
Confidence            77888888888889999999999999999999999999999999999999999999999999999999843322211   


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhccC--ChhHHHHHHHHHHHHHHHHHHHHhhcccccc----ccccccch
Q 017343          154 RGSGSSPRKGDALVIAGATLYAVSNVSEEFLVKKA--DRIELMAFLGLFGGIISAVQISILERKELQS----IHWSAGAA  227 (373)
Q Consensus       154 ~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~  227 (373)
                      .....+...|....+.+++..++..++.+|.+|+.  +.+..+...+.+|.++.+...+..++.....    ..|+...|
T Consensus       175 ~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~vw  254 (345)
T KOG2234|consen  175 ESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIVW  254 (345)
T ss_pred             CCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHHHH
Confidence            12355678999999999999999999999999754  4666777788888888877666665553321    12333333


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCCCC
Q 017343          228 LPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDKD  303 (373)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~  303 (373)
                      ...+....+..    ....+.++.+...-.....+..+++.+.++.+++.+||....+|+.+++.++.+|...+++
T Consensus       255 ~vVl~~a~gGL----lvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~  326 (345)
T KOG2234|consen  255 LVVLLNAVGGL----LVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPAR  326 (345)
T ss_pred             HHHHHHhccch----hHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCcc
Confidence            33333333322    2234458889888888888889999999999999999999999999999999999855543

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.81  E-value=5.5e-18  Score=145.43  Aligned_cols=285  Identities=15%  Similarity=0.169  Sum_probs=209.5

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc-----ccCccchHHHH-
Q 017343            5 KEFWTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR-----QPLKAKWYYYL-   78 (373)
Q Consensus         5 ~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~-----~~~~~~~~~~~-   78 (373)
                      ++.++.++..-+.+.+.+.++.-+.-...++..+ .+..|.+++.++.++-.++-....+.++     .+..-.|..++ 
T Consensus         7 ~~~~~~~rV~~L~lVl~yY~~Si~Ltf~~~~~~~-~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr   85 (349)
T KOG1443|consen    7 DNQFLMNRVLTLALVLLYYFLSIGLTFYFKWLTK-NFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLR   85 (349)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHH
Confidence            3444444444444433333333333222333322 6788999999998887776555433322     12233444433 


Q ss_pred             ---HHHHHHHHHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCC
Q 017343           79 ---ILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRG  155 (373)
Q Consensus        79 ---~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~  155 (373)
                         ..|+.......+.+++++|++.+.+++.++.+++|+.+++.+|.-||+++.-...++++.+|+++++..+.      
T Consensus        86 ~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsT------  159 (349)
T KOG1443|consen   86 RLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKST------  159 (349)
T ss_pred             HhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEeccc------
Confidence               55665555588999999999999999999999999999999999999999999999999999999998653      


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHHHHhccC-----ChhHHHHHHHHHHHHHHHHHHHHhhccccccc------ccc-
Q 017343          156 SGSSPRKGDALVIAGATLYAVSNVSEEFLVKKA-----DRIELMAFLGLFGGIISAVQISILERKELQSI------HWS-  223 (373)
Q Consensus       156 ~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~-  223 (373)
                        +-...|..+..++.++.++...+.+.++++.     +|...++.......+.+++..+.+|+......      .-. 
T Consensus       160 --qf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~  237 (349)
T KOG1443|consen  160 --QFNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTG  237 (349)
T ss_pred             --ceeehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCcc
Confidence              2346899999999999999999999888654     48888898888888888888888887733210      011 


Q ss_pred             --ccchhHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheee
Q 017343          224 --AGAALPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYS  298 (373)
Q Consensus       224 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~  298 (373)
                        ......+.+.+...++.-...+.++.+++....++.+..+-+.+.+++.++.+|.++...|+|..+...|+.++.
T Consensus       238 ~~~rv~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~  314 (349)
T KOG1443|consen  238 LILRVIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHR  314 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhc
Confidence              111122333344455555566667788999999999999999999999999999999999999999999999983

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.79  E-value=2.7e-17  Score=141.34  Aligned_cols=264  Identities=14%  Similarity=0.158  Sum_probs=212.1

Q ss_pred             cCCCcHHHHHHHHHHHHHHHHHHHHHhc--ccCccchHHHHHHHHHHHHHHHHHHHHHhccchhHHHHhhcchhhHHHHH
Q 017343           40 GINAPTSQSFFNYVLLAIVYGSLMLYRR--QPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFL  117 (373)
Q Consensus        40 ~~~~p~~~~~~r~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll  117 (373)
                      .+.+|.++++.+.+.+.++-..++..++  ...+.+|+++...++.+.....|.|.|++|++.....+-+++..+.++++
T Consensus        47 rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlm  126 (327)
T KOG1581|consen   47 RFEHSLFLVFCQRLVALLVSYAMLKWWKKELSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLM  126 (327)
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHhcccccCCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHH
Confidence            4678899999999888887766554443  56678999999999999999999999999999999999999999999999


Q ss_pred             HHHHhccccceeeeehhhhheecceeeeeccCccC-CCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhcc--CChhHHH
Q 017343          118 TWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAG-DRGSGSSPRKGDALVIAGATLYAVSNVSEEFLVKK--ADRIELM  194 (373)
Q Consensus       118 ~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~-~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~--~~~~~~~  194 (373)
                      +.++.|+|++..+++..++..+|+.+....+.... ......+...|..+.....++.++.+..+.++.++  .+++.++
T Consensus       127 g~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM  206 (327)
T KOG1581|consen  127 GTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMM  206 (327)
T ss_pred             HHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHH
Confidence            99999999999999999999999999987654332 22244577899999999999999999999999874  4688999


Q ss_pred             HHHHHHHHHHHHHHHHHhhcccccccc---ccccchhHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHH
Q 017343          195 AFLGLFGGIISAVQISILERKELQSIH---WSAGAALPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIR  271 (373)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~  271 (373)
                      ++..+++++..... ++..+...+...   .++..+.-++....+....+..+...+++.++.+...++.++-+++++++
T Consensus       207 ~~vNLf~~i~~~~~-li~qg~~~~av~F~~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS  285 (327)
T KOG1581|consen  207 FGVNLFSAILNGTY-LILQGHLLPAVSFIKEHPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLS  285 (327)
T ss_pred             HHHHHHHHHHHHHh-hhcCCCCchHHHHHHcChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHH
Confidence            99999999988554 343333222221   22233333333334434444555666799999999999999999999999


Q ss_pred             HHHhcccccHHHHHHHHHHHHHhheeecCCCCC
Q 017343          272 IGAYHEKVDWLYFIAFAAVAVGLIIYSGGDKDD  304 (373)
Q Consensus       272 ~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~  304 (373)
                      .+.+|++++..|+.|..+++.|+.+-...++++
T Consensus       286 ~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~~  318 (327)
T KOG1581|consen  286 CIVFGHPLSSEQWLGVLIVFGGIFLEILLKKKK  318 (327)
T ss_pred             HHHhCCccchhhccCeeeehHHHHHHHHHHHhc
Confidence            999999999999999999999998876655443

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.79  E-value=8.6e-18  Score=142.29  Aligned_cols=260  Identities=23%  Similarity=0.266  Sum_probs=204.4

Q ss_pred             cCCCcHHHHHHHHHHHHHHHHHHHHHhc---------------ccC--ccchHHHHHHHHHHHHHHHHHHHHHhccchhH
Q 017343           40 GINAPTSQSFFNYVLLAIVYGSLMLYRR---------------QPL--KAKWYYYLILGLIDVEGNFLVVKAYQYTSLTS  102 (373)
Q Consensus        40 ~~~~p~~~~~~r~~~~~~~l~~~~~~~~---------------~~~--~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~  102 (373)
                      ++++|+.++..-++--++++..+...|.               ...  +-+...++..+++...+..+.|.++.+++++.
T Consensus        35 gfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lfl~Pal~Di~gsslm~vgL~lTsASs  114 (372)
T KOG3912|consen   35 GFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLFLPPALCDIAGSSLMYVGLNLTSASS  114 (372)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcceecChHHHHHhhhHHHHHHHHHhhHHH
Confidence            5788999988888888788877755443               011  22233455679999999999999999999999


Q ss_pred             HHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCC--CCCCCchhhHHHHHHHHHHHHHHHH
Q 017343          103 VMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRG--SGSSPRKGDALVIAGATLYAVSNVS  180 (373)
Q Consensus       103 ~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~--~~~~~~~G~~l~l~a~~~~a~~~v~  180 (373)
                      .+++.....+|+.+++..+++++++.+||+|+....+|++.+...|.....+.  +.++...|+++.+.+-+.-|...++
T Consensus       115 fQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s~iitGdllIiiaqiivaiQ~v~  194 (372)
T KOG3912|consen  115 FQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYSSIITGDLLIIIAQIIVAIQMVC  194 (372)
T ss_pred             HHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCccccccchhhhHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999998876544333  2356678999999999999999999


Q ss_pred             HHHHhccC--ChhHHHHHHHHHHHHHHHHHHHHhh----ccccc---cc---cc---------cccchhHHHHHHHHHHH
Q 017343          181 EEFLVKKA--DRIELMAFLGLFGGIISAVQISILE----RKELQ---SI---HW---------SAGAALPFFGYALAMFL  239 (373)
Q Consensus       181 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~---~~---~~---------~~~~~~~~~~~~~~~~~  239 (373)
                      .+|..++.  +|....+|..++|.++.........    +.++.   +-   +|         .+...+.+.+..++...
T Consensus       195 Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAf  274 (372)
T KOG3912|consen  195 EEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAF  274 (372)
T ss_pred             HHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhheee
Confidence            99998755  5999999999999665543332221    11111   00   11         12223334555666556


Q ss_pred             HHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeec
Q 017343          240 FYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSG  299 (373)
Q Consensus       240 ~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  299 (373)
                      ||.....+.+..+++.-.+.-.++..+--++++.+..|.++..|+.|.++.+.|+++|+.
T Consensus       275 fNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY~~  334 (372)
T KOG3912|consen  275 FNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILYNQ  334 (372)
T ss_pred             eeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            677777778999999999999999999999999999999999999999999999999974

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.76  E-value=7.1e-17  Score=141.05  Aligned_cols=218  Identities=18%  Similarity=0.175  Sum_probs=171.3

Q ss_pred             cCccchHHHHHHHHHHHHHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeecc
Q 017343           69 PLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSD  148 (373)
Q Consensus        69 ~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~  148 (373)
                      ..+++..++.+.+++....|.+.+.++++++++..+++.++..+++++++++++|+|++++||.++++.++|++++...+
T Consensus        12 ~~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~   91 (244)
T PF04142_consen   12 KSPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSS   91 (244)
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCC
Confidence            34566778889999999999999999999999999999999999999999999999999999999999999999998766


Q ss_pred             CccCCCC---------CCCCCchhhHHHHHHHHHHHHHHHHHHHHhccC--ChhHHHHHHHHHHHHHHHHHHHHhhcccc
Q 017343          149 VHAGDRG---------SGSSPRKGDALVIAGATLYAVSNVSEEFLVKKA--DRIELMAFLGLFGGIISAVQISILERKEL  217 (373)
Q Consensus       149 ~~~~~~~---------~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (373)
                      ....+..         ...+...|.++.++++++.++..++.+|..|+.  +.+..+...++++.++.++.....++.+.
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~  171 (244)
T PF04142_consen   92 SQSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAI  171 (244)
T ss_pred             ccccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence            5432111         123457999999999999999999999999866  45667778888888887666545444322


Q ss_pred             ccc----cccccchhHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHH
Q 017343          218 QSI----HWSAGAALPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAV  290 (373)
Q Consensus       218 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li  290 (373)
                      .+.    .++++.+..++...++.    .....++|+.+...-+.....+.+++.+.++++|+.+++....+|+.++
T Consensus       172 ~~~g~f~G~~~~~~~~i~~~a~gG----llva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V  244 (244)
T PF04142_consen  172 SESGFFHGYSWWVWIVIFLQAIGG----LLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV  244 (244)
T ss_pred             ccCCchhhcchHHHHHHHHHHHhh----HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence            211    23333333222222222    2334556999999999999999999999999999999999999998753

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.73  E-value=2.9e-17  Score=135.64  Aligned_cols=257  Identities=14%  Similarity=0.153  Sum_probs=197.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhc--ccCccchHHHHHHHHHHHHHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHh
Q 017343           45 TSQSFFNYVLLAIVYGSLMLYRR--QPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFL  122 (373)
Q Consensus        45 ~~~~~~r~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l  122 (373)
                      ..++|+...+-.++.=+++..|+  +..+.+-+.++..++-........+.|++|++.....+-.++.|+-+++++.++.
T Consensus        54 laLVf~qC~~N~vfAkvl~~ir~~~~~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~  133 (337)
T KOG1580|consen   54 LALVFFQCTANTVFAKVLFLIRKKTEIDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFA  133 (337)
T ss_pred             HHHHHHHHHHHHHHHHhheeecccccccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhh
Confidence            44556666665555433333333  4556667778887887777788899999999999999999999999999999999


Q ss_pred             ccccceeeeehhhhheecceeeeeccCccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhccC--ChhHHHHHHHHH
Q 017343          123 KTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVSEEFLVKKA--DRIELMAFLGLF  200 (373)
Q Consensus       123 ~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~--~~~~~~~~~~~~  200 (373)
                      +++.+|+++..++++++||.+....+...++. ...+...|.++.+++.-..++....+.+..+..  ....++.+..++
T Consensus       134 ~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~-e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~Nlw  212 (337)
T KOG1580|consen  134 HKSYHWRKYCCVLMIVVGVALFMYKENKVGGA-EDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLW  212 (337)
T ss_pred             cccccHHHHHHHHHHHHHHHHhhccccccCCC-cccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHH
Confidence            99999999999999999999999864322221 234456899999999999999999999987644  355789999999


Q ss_pred             HHHHHHHHHHHhhcc-ccccc-cccccchhHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhccc
Q 017343          201 GGIISAVQISILERK-ELQSI-HWSAGAALPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEK  278 (373)
Q Consensus       201 ~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~  278 (373)
                      +.+.+....++.+.. ++..+ +..+..+.-+.+.+++..+.+..++......++...+++..++..++++.+.++|+.+
T Consensus       213 StL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~np  292 (337)
T KOG1580|consen  213 STLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNP  292 (337)
T ss_pred             HHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCc
Confidence            999887666544321 11111 1122233334555566666667777778999999999999999999999999999999


Q ss_pred             ccHHHHHHHHHHHHHhheeecCCC
Q 017343          279 VDWLYFIAFAAVAVGLIIYSGGDK  302 (373)
Q Consensus       279 ~~~~~~~G~~li~~g~~l~~~~~~  302 (373)
                      ++.+||+|.++++.|...-....|
T Consensus       293 ls~rQwlgtvlVF~aL~~D~~~GK  316 (337)
T KOG1580|consen  293 LSGRQWLGTVLVFSALTADVVDGK  316 (337)
T ss_pred             CcHHHHHHHHHHHHHhhhHhhcCC
Confidence            999999999999999877554433

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.64  E-value=2.1e-14  Score=125.35  Aligned_cols=291  Identities=15%  Similarity=0.079  Sum_probs=217.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHH--HHHHHHHHHHHHHHHHHhc----ccCccchHHHHHHH
Q 017343            8 WTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQS--FFNYVLLAIVYGSLMLYRR----QPLKAKWYYYLILG   81 (373)
Q Consensus         8 ~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~--~~r~~~~~~~l~~~~~~~~----~~~~~~~~~~~~~g   81 (373)
                      ..++..+.+..++...+..+..-.++|+... .+..|..+.  ..+.+...+.+...-+.+-    +..++..++++...
T Consensus         6 ~~~~~~~~l~sa~~Y~~sS~lm~vvNK~vls-~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~   84 (314)
T KOG1444|consen    6 GSKKQSSPLLSALFYCLSSILMTVVNKIVLS-SYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVS   84 (314)
T ss_pred             cchhhhhhhHHHHHHHHHHHHHHHHHHHHHh-cCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHH
Confidence            3445556666666666677777777777654 344455544  4777777666555433322    44566777888888


Q ss_pred             HHHHHHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCCCCCCc
Q 017343           82 LIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPR  161 (373)
Q Consensus        82 ~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~  161 (373)
                      ++..+.......+++|.++...+++.+..|+++++....++|.|+++..|.++....+|......+|..        ...
T Consensus        85 ~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~s--------f~~  156 (314)
T KOG1444|consen   85 LLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLS--------FNL  156 (314)
T ss_pred             HHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccce--------ecc
Confidence            887777777779999999999999999999999999999999999999999999999999988887642        234


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhc--cCChhHHHHHHHHHHHHHHHHHHHHhhcccccccc---cc-ccchhHHHHHHH
Q 017343          162 KGDALVIAGATLYAVSNVSEEFLVK--KADRIELMAFLGLFGGIISAVQISILERKELQSIH---WS-AGAALPFFGYAL  235 (373)
Q Consensus       162 ~G~~l~l~a~~~~a~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~  235 (373)
                      .|..+++...++-+.+.++.|+..+  +.+.+.+++|..+.+.....+...+++..+--..+   |. ...+..+...++
T Consensus       157 ~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv  236 (314)
T KOG1444|consen  157 RGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCV  236 (314)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHH
Confidence            6999999999999999999999875  34567788898898888876666666543200111   22 112233333444


Q ss_pred             HHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCCCCCCCc
Q 017343          236 AMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDKDDDQP  307 (373)
Q Consensus       236 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~~~  307 (373)
                      ..+...+......+..++...++++......+.+...++++++.++..++|..+-+.|.++|++.+.++++.
T Consensus       237 ~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~~  308 (314)
T KOG1444|consen  237 MGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKKQ  308 (314)
T ss_pred             HHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhccC
Confidence            444555555666788999999999988888888888888889999999999999999999999877554433

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.60  E-value=1.7e-14  Score=121.95  Aligned_cols=273  Identities=14%  Similarity=0.135  Sum_probs=208.5

Q ss_pred             HHHHHHHHhhHHHHhc-cCC-CcHHHHHHHHHHHHHHHHHHHH-HhcccCccchHHHHHHHHHHHHHHHHHHHHHhccch
Q 017343           24 LLITSTGFSSSELARK-GIN-APTSQSFFNYVLLAIVYGSLML-YRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSL  100 (373)
Q Consensus        24 l~~~~~~~~~~~l~~~-~~~-~p~~~~~~r~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~  100 (373)
                      ++.-..+....+..+. ++. ..|.+++.+++.-..+.+..+. ++.++...+|+.+..++++....+.+.+.++.|...
T Consensus        53 f~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~~k~r~iP~rtY~~la~~t~gtmGLsn~SlgYLNY  132 (367)
T KOG1582|consen   53 FLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQTKRRVIPWRTYVILAFLTVGTMGLSNGSLGYLNY  132 (367)
T ss_pred             HHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEeecccceecchhHhhhhHhhhhhccccCcCccccccC
Confidence            3444445555555554 443 4477787777665444333221 222566778999999999888889999999999999


Q ss_pred             hHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCCCCCCchhhHHHHHHHHHHHHHHHH
Q 017343          101 TSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVS  180 (373)
Q Consensus       101 ~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~  180 (373)
                      ....+.+.+..+-+++.+.++-+.|..+..+++..+..+|+++.+..|...    .++-+..|+.+.-+|.++.|+-.-+
T Consensus       133 PtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~----sPNF~~~Gv~mIsgALl~DA~iGNv  208 (367)
T KOG1582|consen  133 PTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQT----SPNFNLIGVMMISGALLADAVIGNV  208 (367)
T ss_pred             cHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhccccc----CCCcceeeHHHHHHHHHHHHHhhHH
Confidence            999999999999999999999999999999999999999999999977543    2445578999999999999999999


Q ss_pred             HHHHhccCC--hhHHHHHHHHHHHHHHHHHHHHhhcccccccc----ccccchhHHHHHHHHHHHHHHHHHHHHhhcchh
Q 017343          181 EEFLVKKAD--RIELMAFLGLFGGIISAVQISILERKELQSIH----WSAGAALPFFGYALAMFLFYSFVPILLKTNGAT  254 (373)
Q Consensus       181 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  254 (373)
                      +++.++..+  ..++.++.+.+|.++++.+..+.+.. ++.++    -++......+...++.+.........++..++.
T Consensus       209 QEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~-f~a~~fcaehp~~tyGy~~~~s~~gylG~~~VLalI~~fGA~  287 (367)
T KOG1582|consen  209 QEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGEL-FSAWTFCAEHPVRTYGYAFLFSLAGYLGIVFVLALIKLFGAL  287 (367)
T ss_pred             HHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccc-hhhhHHHHhCcHhHHHHHHHHHHHhHhhHHHHHHHHHHhchh
Confidence            999887554  56788999999999887776554432 22221    112123333333444444445555667899999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCC
Q 017343          255 MLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGD  301 (373)
Q Consensus       255 ~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  301 (373)
                      ++..+...+..+++++++++|..++|....-|..+++.|+++..+.+
T Consensus       288 ~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk  334 (367)
T KOG1582|consen  288 IAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK  334 (367)
T ss_pred             HHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence            99999999999999999999999999999999999999999987765

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.55  E-value=1.5e-14  Score=122.59  Aligned_cols=274  Identities=14%  Similarity=0.119  Sum_probs=202.3

Q ss_pred             HHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHh-cccCccchHHHHHHHHHHHHHHHHHHHHHhc-cchhHHH
Q 017343           27 TSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYR-RQPLKAKWYYYLILGLIDVEGNFLVVKAYQY-TSLTSVM  104 (373)
Q Consensus        27 ~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~-~~~~~~~  104 (373)
                      |+.-.....+.+....+-..+++..+++-+.--+++.-.- ..+++.+.+.+++.-..-+..+.+.++|+++ ++...-.
T Consensus        16 csnvv~lE~L~~~~pgsgNLITFaqFlFia~eGlif~skf~~~k~kiplk~Y~i~V~mFF~vnv~NN~al~f~I~~PlHi   95 (330)
T KOG1583|consen   16 CSNVVFLELLVRNEPGSGNLITFAQFLFIATEGLIFTSKFFTVKPKIPLKDYAITVAMFFIVNVTNNYALKFNIPMPLHI   95 (330)
T ss_pred             hchHHHHHHHHHhCCCCeeehHHHHHHHHHHhceeeeccccccCCCCchhhhheehheeeeeeeeccceeeecccceEEE
Confidence            3344445555554444456778887776665544443111 1346666777777666656669999999998 7888888


Q ss_pred             HhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCC---C--------CCCCCchhhHHHHHHHHH
Q 017343          105 LLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDR---G--------SGSSPRKGDALVIAGATL  173 (373)
Q Consensus       105 ~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~---~--------~~~~~~~G~~l~l~a~~~  173 (373)
                      ++.+.+++.+++++++++|+|.+.+|+.++++..+|+++.+.........   +        ......+|+.+...+.+.
T Consensus        96 IfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~  175 (330)
T KOG1583|consen   96 IFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLL  175 (330)
T ss_pred             EEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHH
Confidence            89999999999999999999999999999999999999988744322211   0        112236899999999999


Q ss_pred             HHHHHHHHHHHhccC--ChhHHHHHHHHHHHHHHHHHHH--------Hhhcc--ccccccc-cccchhHHHHHHHHHHHH
Q 017343          174 YAVSNVSEEFLVKKA--DRIELMAFLGLFGGIISAVQIS--------ILERK--ELQSIHW-SAGAALPFFGYALAMFLF  240 (373)
Q Consensus       174 ~a~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--------~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~  240 (373)
                      .|...++++...++.  ++-+.++|.........+...-        ....+  ..+.... -+..+..++..++.++.+
T Consensus       176 sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~C  255 (330)
T KOG1583|consen  176 SAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYFC  255 (330)
T ss_pred             HHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHHHHHHH
Confidence            999999999888765  4778999988887755432110        00000  1111111 133355677788888888


Q ss_pred             HHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecC
Q 017343          241 YSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGG  300 (373)
Q Consensus       241 ~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~  300 (373)
                      ..+...+....++..++++..++..++.+++++.|..+++++.|+|++++..|.+++...
T Consensus       256 ikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~  315 (330)
T KOG1583|consen  256 IKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANV  315 (330)
T ss_pred             HHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            888888889999999999999999999999999999999999999999999999998753

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.48  E-value=2.3e-13  Score=111.85  Aligned_cols=264  Identities=12%  Similarity=0.069  Sum_probs=197.3

Q ss_pred             cCCCcHHHHHHHHHHHHHHHHHHHHHhc-ccCccchHHHHHHHHHHHHHHHHHHHHHhccchhHHHHhhcchhhHHHHHH
Q 017343           40 GINAPTSQSFFNYVLLAIVYGSLMLYRR-QPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLT  118 (373)
Q Consensus        40 ~~~~p~~~~~~r~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~  118 (373)
                      ++.--+.+.+.+.+...+-+..+-+.+- .....+.+.++...++.....+..-.+++|.++..+++..+++.+.++...
T Consensus        33 gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR~t~aK~WfpiSfLLv~MIyt~SKsLqyL~vpiYTiFKNltII~iAygE  112 (309)
T COG5070          33 GFNMNFLLLAVQSLVCVVGLLILKFLRLVEFRLTKAKKWFPISFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGE  112 (309)
T ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHhHhheehhhhhhhcCHHHHHHHHHHhcccceeeeeeeHHHHhccceeehhHhhH
Confidence            6665667777777766665555433332 222445556677777777766777799999999999999999999999999


Q ss_pred             HHHhccccceeeeehhhhheecceeeeeccCccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhccC--ChhHHHHH
Q 017343          119 WIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVSEEFLVKKA--DRIELMAF  196 (373)
Q Consensus       119 ~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~--~~~~~~~~  196 (373)
                      ..++|.|.+-....+.++.++.-+...++|.+.... .....+.|.++...-++..+.+....|+..+-.  .....++|
T Consensus       113 vl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~-~~~~lN~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfY  191 (309)
T COG5070         113 VLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAF-KAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFY  191 (309)
T ss_pred             HHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHH-HhcccCCceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHH
Confidence            999999999999999999888888888876532111 122446899999999999999999999876533  36678999


Q ss_pred             HHHHHHHHHHHHHHHhhcccccc--ccccccchhHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHH
Q 017343          197 LGLFGGIISAVQISILERKELQS--IHWSAGAALPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGA  274 (373)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~  274 (373)
                      ..+.+..++.....++|.+....  .+.........+..+++.+.--++..+..+..+++..++++.++..-..+.|.++
T Consensus       192 nNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvf  271 (309)
T COG5070         192 NNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVF  271 (309)
T ss_pred             hhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhh
Confidence            99999999888888877653321  1222223223333333333333444556789999999999999999999999999


Q ss_pred             hcccccHHHHHHHHHHHHHhheeecCCCCC
Q 017343          275 YHEKVDWLYFIAFAAVAVGLIIYSGGDKDD  304 (373)
Q Consensus       275 ~~e~~~~~~~~G~~li~~g~~l~~~~~~~~  304 (373)
                      |+|+.+...+....+-..+.++|...+.++
T Consensus       272 fdap~nf~si~sillGflsg~iYavaks~k  301 (309)
T COG5070         272 FDAPVNFLSIFSILLGFLSGAIYAVAKSKK  301 (309)
T ss_pred             cCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999888888888765443

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.47  E-value=5.1e-13  Score=100.26  Aligned_cols=129  Identities=16%  Similarity=0.205  Sum_probs=110.0

Q ss_pred             HHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc------ccCccchHHHHHHHHHHHHHHH
Q 017343           16 LGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR------QPLKAKWYYYLILGLIDVEGNF   89 (373)
Q Consensus        16 ~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~------~~~~~~~~~~~~~g~~~~~~~~   89 (373)
                      ++.+++.+++++..-.+.|.-.+  ..+|.+.++.|.....+++..++...+      ...++.|....+.|+.+..+..
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~--~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl   82 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLE--GVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWL   82 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcc--ccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHH
Confidence            45666777788777777776553  557899999999999888888776655      2356777777788888888899


Q ss_pred             HHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeee
Q 017343           90 LVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIF  146 (373)
Q Consensus        90 ~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~  146 (373)
                      +||.|++...++.+..+..++|+++++++++++|||++..+|+|+.++.+|++++..
T Consensus        83 ~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          83 LYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            999999999999999999999999999999999999999999999999999998864

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.46  E-value=1.9e-14  Score=121.85  Aligned_cols=268  Identities=12%  Similarity=0.063  Sum_probs=194.8

Q ss_pred             HHhhHHHHhc---cCCCcHHHHHHHHHHHHHHHHHHHHHhc------cc-----CccchHHHHHHHHHHHHHHHHHHHHH
Q 017343           30 GFSSSELARK---GINAPTSQSFFNYVLLAIVYGSLMLYRR------QP-----LKAKWYYYLILGLIDVEGNFLVVKAY   95 (373)
Q Consensus        30 ~~~~~~l~~~---~~~~p~~~~~~r~~~~~~~l~~~~~~~~------~~-----~~~~~~~~~~~g~~~~~~~~~~~~al   95 (373)
                      -+.+|.+...   ..+.|.+++++..++...+...+-+...      ..     .-+..+....+.++-+.+..+.++.+
T Consensus        44 vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~mI~fnnlcL  123 (347)
T KOG1442|consen   44 VFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFILMISFNNLCL  123 (347)
T ss_pred             hhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheeeeehhccceeh
Confidence            3445655443   5678999999999888877766533221      11     11222345555666555566777899


Q ss_pred             hccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCCCCCCchhhHHHHHHHHHHH
Q 017343           96 QYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYA  175 (373)
Q Consensus        96 ~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a  175 (373)
                      +|++++.+.+=.++..+|+++++++++|+|-+..-..++.+++.|..+=.-.++.     .+.-...|.++++.+.++-|
T Consensus       124 ~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~-----~~~ls~~GvifGVlaSl~vA  198 (347)
T KOG1442|consen  124 KYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGS-----TGTLSWIGVIFGVLASLAVA  198 (347)
T ss_pred             hhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccc-----cCccchhhhHHHHHHHHHHH
Confidence            9999999999999999999999999999999999988888888887665432211     13345799999999999999


Q ss_pred             HHHHHHHHHhccCC--hhHHHHHHHHHHHHHHHHHHHHhhcc-cccc--ccccccchhHHHHHHHHHHHHHHHHHHHHhh
Q 017343          176 VSNVSEEFLVKKAD--RIELMAFLGLFGGIISAVQISILERK-ELQS--IHWSAGAALPFFGYALAMFLFYSFVPILLKT  250 (373)
Q Consensus       176 ~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (373)
                      +..++.||.....+  -+.+++|..+.+.++.+|...+.+.. ....  ..+....|......++..+..++.-..=++.
T Consensus       199 lnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyvTg~QIK~  278 (347)
T KOG1442|consen  199 LNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGYVTGWQIKV  278 (347)
T ss_pred             HHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhheeeEEEEe
Confidence            99999998765443  56788999999988887766554432 1111  1233344444333334333333333333688


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCCC
Q 017343          251 NGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDK  302 (373)
Q Consensus       251 ~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  302 (373)
                      ++|.+.++....+-..-.+++..+++|.-+..-|.|-++++.|...|++.++
T Consensus       279 TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~  330 (347)
T KOG1442|consen  279 TSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKE  330 (347)
T ss_pred             cccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999988553

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=99.44  E-value=1.9e-12  Score=104.62  Aligned_cols=217  Identities=17%  Similarity=0.206  Sum_probs=163.6

Q ss_pred             HHHHHHHHHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCCCC
Q 017343           79 ILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGS  158 (373)
Q Consensus        79 ~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~  158 (373)
                      ...++....|+.+..|++.++++.++.+..+.-.|+.+++++.+|+|+...++++.++++.|++++...|-+      +.
T Consensus        58 PF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~------~a  131 (290)
T KOG4314|consen   58 PFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNE------HA  131 (290)
T ss_pred             ceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccch------hh
Confidence            334455566999999999999999999999999999999999999999999999999999999999976643      55


Q ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHhccCCh---hHHHHHHHHHHHHHHHHHHHHhhcccccccc-ccccchhHHHHHH
Q 017343          159 SPRKGDALVIAGATLYAVSNVSEEFLVKKADR---IELMAFLGLFGGIISAVQISILERKELQSIH-WSAGAALPFFGYA  234 (373)
Q Consensus       159 ~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  234 (373)
                      +.+.|+.+++.+++..++|.+..|+...+.+-   ...+.....+...+...+.++......++.+ .....|.-+.|..
T Consensus       132 ~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~qsFA~~PWG~l~G~A  211 (290)
T KOG4314|consen  132 DEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAFTGVEHLQSFAAAPWGCLCGAA  211 (290)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHhchHHHHHHhhCCchhhhhHH
Confidence            67899999999999999999999998876653   2334444444444443333333322233222 2222234444444


Q ss_pred             HHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCC
Q 017343          235 LAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGD  301 (373)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  301 (373)
                      .-...++...........+...++-+....+.....+.++-+-..+....+|..++++|.++....+
T Consensus       212 ~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~  278 (290)
T KOG4314|consen  212 GLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPE  278 (290)
T ss_pred             HHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheeccc
Confidence            4455666666666677888888888777788888899987777789999999999999999887644

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.37  E-value=3.2e-11  Score=98.63  Aligned_cols=137  Identities=21%  Similarity=0.228  Sum_probs=116.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhcc-------CChhHHHHHHHHHHHHHHHHHHHHhhccccccccc---------cccc
Q 017343          163 GDALVIAGATLYAVSNVSEEFLVKK-------ADRIELMAFLGLFGGIISAVQISILERKELQSIHW---------SAGA  226 (373)
Q Consensus       163 G~~l~l~a~~~~a~~~v~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~  226 (373)
                      |.++++.+.++.+++.++.|+..++       .++..+..+....+.+++.+...+.|+........         ....
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            6789999999999999999998765       36889999999999999999888887764221111         2233


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeec
Q 017343          227 ALPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSG  299 (373)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  299 (373)
                      +..++..++..+.++......+++.++...++...++.+..++.++++++|++|..+++|.++.+.|+++|+|
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            3445556677788889999999999999999999999999999999999999999999999999999999975

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.35  E-value=2.8e-11  Score=90.97  Aligned_cols=136  Identities=15%  Similarity=0.024  Sum_probs=104.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHH
Q 017343          163 GDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYS  242 (373)
Q Consensus       163 G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (373)
                      -.++++++++++++..++.|-..++.||...+....+...+++............. -..+...+..+...+++...-+.
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~-~~~~~k~~lflilSGla~glswl   82 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQAG-GEIGPKSWLFLILSGLAGGLSWL   82 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceecc-cccCcceehhhhHHHHHHHHHHH
Confidence            45789999999999999999999999999999999988888876655544433221 11223333333333344333345


Q ss_pred             HHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeec
Q 017343          243 FVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSG  299 (373)
Q Consensus       243 ~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  299 (373)
                      +.+++++...+..+....-++|++++++++++++|++|..+++|+++|++|.++...
T Consensus        83 ~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          83 LYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            556667888899888888889999999999999999999999999999999998764

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=99.32  E-value=2.4e-10  Score=99.63  Aligned_cols=244  Identities=13%  Similarity=0.128  Sum_probs=163.6

Q ss_pred             CcHHHHHHHHHHHHHHHHHHHHHhcccC---ccchHHHHHHHHHHHHHHHHHHHHHhccchhHHHHhhcch-hhHHHHHH
Q 017343           43 APTSQSFFNYVLLAIVYGSLMLYRRQPL---KAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWT-IPCVMFLT  118 (373)
Q Consensus        43 ~p~~~~~~r~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~-p~~~~ll~  118 (373)
                      +|....+--.+-+.++-+.....+++..   ...+..-++.|++...++.+.+.|+++..++.+.++.... .+.+.+++
T Consensus        11 ~~~~Q~lG~t~Gali~alv~~~~~~p~~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~g   90 (269)
T PF06800_consen   11 KPANQILGTTIGALIFALVVFLFRQPAFSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIG   90 (269)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHH
Confidence            4555554444444444333333343222   2556666777888888899999999999999999998544 45577999


Q ss_pred             HHHhccccceeeee----hhhhheecceeeeeccCccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhccCChhHHH
Q 017343          119 WIFLKTKYRYKKIT----GVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVSEEFLVKKADRIELM  194 (373)
Q Consensus       119 ~~~l~e~~~~~~~~----~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~  194 (373)
                      .++++|..+..+++    ++++.++|+.+....+...+..+...+...|....+.+.+.|..|.+..|.  .+.+++...
T Consensus        91 v~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~--~~~~~~~~~  168 (269)
T PF06800_consen   91 VLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKA--FHVSGWSAF  168 (269)
T ss_pred             HhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHh--cCCChhHhH
Confidence            99999988877764    778889999999887765443223445567999999999999999999775  457777776


Q ss_pred             HHHHHHHHHHHHHHHHHhhccccccccccccchhHHHH--HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHH
Q 017343          195 AFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFG--YALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRI  272 (373)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~  272 (373)
                      .-+.+-..+...+...+.+.....+..|.    ..+.|  ..++.+.++...    +..+....-....+.++++.+.++
T Consensus       169 lPqaiGm~i~a~i~~~~~~~~~~~k~~~~----nil~G~~w~ignl~~~is~----~~~G~a~af~lSQ~~vvIStlgGI  240 (269)
T PF06800_consen  169 LPQAIGMLIGAFIFNLFSKKPFFEKKSWK----NILTGLIWGIGNLFYLISA----QKNGVATAFTLSQLGVVISTLGGI  240 (269)
T ss_pred             HHHHHHHHHHHHHHhhcccccccccchHH----hhHHHHHHHHHHHHHHHhH----HhccchhhhhHHhHHHHHHHhhhh
Confidence            66654444333333322221111112221    22222  223333333333    677777777777788999999999


Q ss_pred             HHhcccccHH----HHHHHHHHHHHhhe
Q 017343          273 GAYHEKVDWL----YFIAFAAVAVGLII  296 (373)
Q Consensus       273 ~~~~e~~~~~----~~~G~~li~~g~~l  296 (373)
                      +++||+=+.+    .++|.++++.|.++
T Consensus       241 ~il~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  241 FILKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             eEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence            9999997755    45688989888765

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.20  E-value=1.2e-10  Score=91.50  Aligned_cols=125  Identities=22%  Similarity=0.299  Sum_probs=93.2

Q ss_pred             HHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHHHHHhhc
Q 017343          172 TLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPILLKTN  251 (373)
Q Consensus       172 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (373)
                      ++||.+.+..|+..++.|+...+.+.+..+.+ ..+.....+..+....+........+.+. ++....+.......++.
T Consensus         1 ~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~   78 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGL-LGTALAYLLYFYALKYI   78 (126)
T ss_pred             ceeeeHHHHHHHHhccCCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhc-cceehHHHHHHHHHHhc
Confidence            47899999999999999999999999999997 55555555443322222222222222222 21223334445556999


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheee
Q 017343          252 GATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYS  298 (373)
Q Consensus       252 ~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~  298 (373)
                      ++...++...++|+++.++++++++|+++..+++|+++++.|+++..
T Consensus        79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   79 SASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999998653

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.18  E-value=1.8e-11  Score=96.40  Aligned_cols=119  Identities=24%  Similarity=0.444  Sum_probs=97.1

Q ss_pred             HHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc-----ccCccchHHHHHHHHHH-HHHHHHHHHHHhc
Q 017343           24 LLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR-----QPLKAKWYYYLILGLID-VEGNFLVVKAYQY   97 (373)
Q Consensus        24 l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~g~~~-~~~~~~~~~al~~   97 (373)
                      ++|+......|...++  .+|...+++|+..+.+ ++++.....     ...++.+......+.++ ...+.+++.++++
T Consensus         1 ~~~a~~~~~~k~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~   77 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKK--ISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKY   77 (126)
T ss_pred             ceeeeHHHHHHHHhcc--CCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHh
Confidence            4678888888888763  6789999999999996 444433222     33445566667777775 5558899999999


Q ss_pred             cchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeee
Q 017343           98 TSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVI  145 (373)
Q Consensus        98 ~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~  145 (373)
                      .+++.++++.++.|+++.+++++++||++++++++|+++++.|++++.
T Consensus        78 ~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   78 ISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999987753

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.17  E-value=4e-11  Score=92.55  Aligned_cols=100  Identities=18%  Similarity=0.443  Sum_probs=83.1

Q ss_pred             HHHHHHHHHHHHHHHHHhc-------ccCccchHHHHHHHHHHH-HHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHH
Q 017343           49 FFNYVLLAIVYGSLMLYRR-------QPLKAKWYYYLILGLIDV-EGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWI  120 (373)
Q Consensus        49 ~~r~~~~~~~l~~~~~~~~-------~~~~~~~~~~~~~g~~~~-~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~  120 (373)
                      .+|+..+.+++..+...++       ...++++......|+++. ..+.+++.|+++.+ +.++++.+++|+++++++++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            4788888888877655543       122355556666688877 55888889999999 58889999999999999999


Q ss_pred             HhccccceeeeehhhhheecceeeeeccC
Q 017343          121 FLKTKYRYKKITGVVVCVAGLVTVIFSDV  149 (373)
Q Consensus       121 ~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~  149 (373)
                      ++|||++++++++++++++|++++..++.
T Consensus        81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~  109 (113)
T PF13536_consen   81 FFKERLSPRRWLAILLILIGVILIAWSDL  109 (113)
T ss_pred             HhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence            99999999999999999999999998765

>TIGR00803 nst UDP-galactose transporter

Probab=99.15  E-value=3.8e-10  Score=98.22  Aligned_cols=200  Identities=12%  Similarity=0.038  Sum_probs=111.8

Q ss_pred             HHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCCCCCCchhhHHHHHHH
Q 017343           92 VKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGA  171 (373)
Q Consensus        92 ~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~l~l~a~  171 (373)
                      +.++.+..+...... ....+.++++....++.+.+..+|.++.....|+......+.. .......+...|..+.+.++
T Consensus        17 ~v~l~~~~~~~~~~~-~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~-~~~~~~g~~~~g~~~~l~a~   94 (222)
T TIGR00803        17 LIALGNLLAAGKQVT-QLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSS-AKTLMFGNPVVGLSAVLSAL   94 (222)
T ss_pred             HHHHhcccccceeee-hHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCC-ccccccccHHHHHHHHHHHH
Confidence            333333333333333 3344444444444444444444444444444444444332211 00111234567888889999


Q ss_pred             HHHHHHHHHHHHHhccCCh--hHHHHHHHHHHHHHHHHHHHHhhccccccc----cccccchhHHHHHHHHHHHHHHHHH
Q 017343          172 TLYAVSNVSEEFLVKKADR--IELMAFLGLFGGIISAVQISILERKELQSI----HWSAGAALPFFGYALAMFLFYSFVP  245 (373)
Q Consensus       172 ~~~a~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~  245 (373)
                      ++.++..++.++..++.+.  +..+....+++.+.........+.......    .++...+...+...    ....+..
T Consensus        95 ~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a----~~~~~v~  170 (222)
T TIGR00803        95 LSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIVGLLNV----GGGLCIG  170 (222)
T ss_pred             HHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHHHHHHH----hcCceee
Confidence            9999999999998765432  222222233333322121111111111111    11222222222111    2223355


Q ss_pred             HHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhhee
Q 017343          246 ILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIY  297 (373)
Q Consensus       246 ~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~  297 (373)
                      ..+++.++...++...++++++.++++++|||+++..+++|+.+++.|+++|
T Consensus       171 ~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       171 GVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             ehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            6679999999999999999999999999999999999999999999998775

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.03  E-value=2.2e-09  Score=95.84  Aligned_cols=132  Identities=18%  Similarity=0.186  Sum_probs=104.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc---ccCccchHHHHHHHHHHHH-
Q 017343           11 KTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR---QPLKAKWYYYLILGLIDVE-   86 (373)
Q Consensus        11 ~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~g~~~~~-   86 (373)
                      ....+.++++..+++|+......|...+.....+.....+++.++.+++.++.....   ......|...+..++++.. 
T Consensus       125 ~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (260)
T TIGR00950       125 INPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQALSLQWGALLYLGLIGTAL  204 (260)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHH
Confidence            346788888999999999999999887532222445555788888888887765543   1223344445666776654 


Q ss_pred             HHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecce
Q 017343           87 GNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLV  142 (373)
Q Consensus        87 ~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~  142 (373)
                      +..+++.++++.+++.++++.++.|++++++++++++|+++..+++|+.+.++|+.
T Consensus       205 ~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~  260 (260)
T TIGR00950       205 AYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence            48889999999999999999999999999999999999999999999999998863

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.97  E-value=1.5e-08  Score=91.45  Aligned_cols=269  Identities=13%  Similarity=0.121  Sum_probs=144.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhcccCccchHHHHHHHHH-HHHHH
Q 017343           10 KKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLI-DVEGN   88 (373)
Q Consensus        10 ~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~   88 (373)
                      +....|+.+.+..+++.+....+.|....+....+.     |..-.   ...++      .+..|+    .|++ ...+.
T Consensus         3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~-----~~~~~---~~~~l------~~~~W~----~G~~~~~~g~   64 (300)
T PF05653_consen    3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSL-----RAGSG---GRSYL------RRPLWW----IGLLLMVLGE   64 (300)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-----cccch---hhHHH------hhHHHH----HHHHHHhcch
Confidence            345667788888778877777777765433111000     00000   00000      011222    2332 33447


Q ss_pred             HHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCCCC--------CC
Q 017343           89 FLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGS--------SP  160 (373)
Q Consensus        89 ~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~--------~~  160 (373)
                      .+.+.|+.+.|.+..+++..+..++..+++..++|||++++.+.|+.++++|..++.......++.....        ..
T Consensus        65 ~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~~~l~~~~~~~~  144 (300)
T PF05653_consen   65 ILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHTLDELIALLSQPG  144 (300)
T ss_pred             HHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCCHHHHHHHhcCcc
Confidence            7888999999999999999999999999999999999999999999999999998776443222111000        00


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHH----HHHHH---hhccccccccccccchhHHHHH
Q 017343          161 RKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISA----VQISI---LERKELQSIHWSAGAALPFFGY  233 (373)
Q Consensus       161 ~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~---~~~~~~~~~~~~~~~~~~~~~~  233 (373)
                      .+-.. .+...+...+.....+|.. +.+.........++++....    +...+   .++.  .++ ..+..+..++..
T Consensus       145 fl~y~-~~~~~~~~~L~~~~~~r~g-~~~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~--~~f-~~~~~y~l~~~~  219 (300)
T PF05653_consen  145 FLVYF-ILVLVLILILIFFIKPRYG-RRNILVYISICSLIGSFTVLSAKAISILIKLTFSGD--NQF-TYPLTYLLLLVL  219 (300)
T ss_pred             eehhH-HHHHHHHHHHHHhhcchhc-ccceEEEEEEeccccchhhhHHHHHHHHHHHHhcCc--hhh-hhhHHHHHHHHH
Confidence            11111 1111122222222222221 22222111112222221111    00011   1111  111 112223333333


Q ss_pred             HHHHHHHHHHHHHHHhhcchhHHHH-HHHHHHHHHHHHHHHHhccc--ccH----HHHHHHHHHHHHhheeecCC
Q 017343          234 ALAMFLFYSFVPILLKTNGATMLNL-SLLTSDMWAVLIRIGAYHEK--VDW----LYFIAFAAVAVGLIIYSGGD  301 (373)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~pv~~~l~~~~~~~e~--~~~----~~~~G~~li~~g~~l~~~~~  301 (373)
                      ..+.........+.+++.++..+.. ....-...+++-|.++|+|.  .+.    ...+|..++++|+++....+
T Consensus       220 v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~lL~~~~  294 (300)
T PF05653_consen  220 VVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFLLSSSK  294 (300)
T ss_pred             HHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhheeeccC
Confidence            4444444445566667776665543 34455778888899999976  444    34678999999999987644

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.93  E-value=3.9e-08  Score=89.42  Aligned_cols=139  Identities=10%  Similarity=0.110  Sum_probs=101.6

Q ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhcc-ccccccccccchhHHHHHHHHH
Q 017343          159 SPRKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERK-ELQSIHWSAGAALPFFGYALAM  237 (373)
Q Consensus       159 ~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  237 (373)
                      +...|+++.++++++|+...+..|.. .+.+|.+..++...++.+++.+........ ...+...+...+......++..
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLI   83 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHHH
Confidence            34589999999999999999999764 678999999999999988775554332211 0000000111111111222223


Q ss_pred             HHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheee
Q 017343          238 FLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYS  298 (373)
Q Consensus       238 ~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~  298 (373)
                      ...+.+....+++.++...++..++.|+++.++++++++|+++..+++|+++.++|+++..
T Consensus        84 ~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         84 GGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            3334455566699999999999999999999999999999999999999999999998765

>TIGR00688 rarD rarD protein

Probab=98.87  E-value=9.5e-08  Score=85.06  Aligned_cols=136  Identities=11%  Similarity=0.164  Sum_probs=98.7

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhccc--cccccc-cc-cchhHHHHHHHHH
Q 017343          162 KGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKE--LQSIHW-SA-GAALPFFGYALAM  237 (373)
Q Consensus       162 ~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~-~~~~~~~~~~~~~  237 (373)
                      .|.++.++++++|+...+..|. ..+.||.+..++.++++++++.+.........  .++... .. .....+...++..
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   80 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LKPLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLI   80 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHH
Confidence            4889999999999999999997 56799999999999999887655443332110  011111 11 1111111112223


Q ss_pred             HHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheee
Q 017343          238 FLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYS  298 (373)
Q Consensus       238 ~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~  298 (373)
                      ..++.+.....++.++..+++..++.|+++.++++++++|+++.++++|.++.++|+++..
T Consensus        81 ~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        81 GFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             HHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence            3333444555688999999999999999999999999999999999999999999998754

This uncharacterized protein is predicted to have many membrane-spanning domains.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.85  E-value=9.9e-08  Score=86.16  Aligned_cols=132  Identities=11%  Similarity=0.020  Sum_probs=92.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhh-ccccccccccccchhHHHHHHHHHHHHHH
Q 017343          164 DALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILE-RKELQSIHWSAGAALPFFGYALAMFLFYS  242 (373)
Q Consensus       164 ~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (373)
                      .++.++++++++...++.|+..++.++..  .+....++++..+...... ...++..+..+  +......++....++.
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~   78 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKEPDFL--WWALLAHSVLLTPYGLWYLAQVGWSRLPATF--WLLLAISAVANMVYFL   78 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCchhHHH--HHHHHHHHHHHHHHHHHhcccCCCCCcchhh--HHHHHHHHHHHHHHHH
Confidence            46889999999999999998887765543  4444555555544443221 11111111111  2222223333445555


Q ss_pred             HHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeec
Q 017343          243 FVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSG  299 (373)
Q Consensus       243 ~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  299 (373)
                      ......++.++...+...++.|+++.++++++++|+++.++++|+++++.|+++...
T Consensus        79 ~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~  135 (281)
T TIGR03340        79 GLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL  135 (281)
T ss_pred             HHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence            666677999999999999999999999999999999999999999999999987654

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.70  E-value=1.1e-07  Score=88.16  Aligned_cols=135  Identities=13%  Similarity=0.147  Sum_probs=95.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhcccCcc------chH--HHHHHHHHH
Q 017343           13 LLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKA------KWY--YYLILGLID   84 (373)
Q Consensus        13 ~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~------~~~--~~~~~g~~~   84 (373)
                      ..|.++.+..+++|+......+...+ ++.++...+++...+..+.+.+...........      ...  ..+..++..
T Consensus       188 ~lG~~l~l~aa~~wa~~~il~~~~~~-~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~y~~i~t  266 (358)
T PLN00411        188 LIGGALLTIQGIFVSVSFILQAHIMS-EYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITLITIVTMAIIT  266 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH-HcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHHHHHHHHHHHH
Confidence            45777788888899888888887654 344445556666665555444332221111111      111  122233333


Q ss_pred             HHHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeecc
Q 017343           85 VEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSD  148 (373)
Q Consensus        85 ~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~  148 (373)
                      ..+..++++++++.+++.+++..++.|++.+++++++++|+++..+++|.+++++|+.++....
T Consensus       267 ~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~  330 (358)
T PLN00411        267 SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGK  330 (358)
T ss_pred             HHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhh
Confidence            3347778899999999999999999999999999999999999999999999999999988643

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=98.68  E-value=6.2e-10  Score=93.42  Aligned_cols=272  Identities=14%  Similarity=0.102  Sum_probs=169.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc-ccCccchHHHHHHHHHHHHHHHHHH
Q 017343           14 LGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR-QPLKAKWYYYLILGLIDVEGNFLVV   92 (373)
Q Consensus        14 ~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~   92 (373)
                      ..++++++-++.|++...++....    ..|..++.--.+-+.++-+...+... ......+..-++.|++..+++...+
T Consensus         2 ~~~liaL~P~l~WGsip~v~~k~G----G~p~qQ~lGtT~GALifaiiv~~~~~p~~T~~~~iv~~isG~~Ws~GQ~~Qf   77 (288)
T COG4975           2 MDLLIALLPALGWGSIPLVANKFG----GKPYQQTLGTTLGALIFAIIVFLFVSPELTLTIFIVGFISGAFWSFGQANQF   77 (288)
T ss_pred             hhHHHHHHHHHHhcccceeeeecC----CChhHhhhhccHHHHHHHHHHheeecCccchhhHHHHHHhhhHhhhhhhhhh
Confidence            356777888889998887766542    35666665554444444444333333 3333444455566777777899999


Q ss_pred             HHHhccchhHHHHhhcchhhHHH-HHHHHHhccccceeee----ehhhhheecceeeeeccCccCCCCCCCCCchhhHHH
Q 017343           93 KAYQYTSLTSVMLLDCWTIPCVM-FLTWIFLKTKYRYKKI----TGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALV  167 (373)
Q Consensus        93 ~al~~~~~~~~~~i~~~~p~~~~-ll~~~~l~e~~~~~~~----~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~l~  167 (373)
                      .|.++.+++.+.++..-.-+.-. +++.+.++|..+..+.    +++++.+.|+.+-...+.+..+.+..++.-.|....
T Consensus        78 ka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~~~~n~kkgi~~L  157 (288)
T COG4975          78 KAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEENPSNLKKGIVIL  157 (288)
T ss_pred             hheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccccccChHhhhhheeee
Confidence            99999999999999877666655 9999999998888764    678888999999999776444444556666899999


Q ss_pred             HHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhc-cccccccccccchhHHHHHHHHHHHHHHHHHH
Q 017343          168 IAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILER-KELQSIHWSAGAALPFFGYALAMFLFYSFVPI  246 (373)
Q Consensus       168 l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (373)
                      +.+.+.|-.|.+..+...  .+.+....-+.. +.++..+..-.... .......|........  ...+...+..+.  
T Consensus       158 ~iSt~GYv~yvvl~~~f~--v~g~saiLPqAi-GMv~~ali~~~~~~~~~~~K~t~~nii~G~~--Wa~GNl~ml~a~--  230 (288)
T COG4975         158 LISTLGYVGYVVLFQLFD--VDGLSAILPQAI-GMVIGALILGFFKMEKRFNKYTWLNIIPGLI--WAIGNLFMLLAA--  230 (288)
T ss_pred             eeeccceeeeEeeecccc--ccchhhhhHHHH-HHHHHHHHHhhcccccchHHHHHHHHhhHHH--HHhhHHHHHHhh--
Confidence            999999999999887643  444443333322 22222222222221 1111222211111111  111122221222  


Q ss_pred             HHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHH----HHHHHHHHHHhheee
Q 017343          247 LLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLY----FIAFAAVAVGLIIYS  298 (373)
Q Consensus       247 ~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~----~~G~~li~~g~~l~~  298 (373)
                        +..+..+.-....+..+++.+-++++++|+=|..+    ++|.++++.|.++..
T Consensus       231 --~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg  284 (288)
T COG4975         231 --QKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLG  284 (288)
T ss_pred             --hhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhh
Confidence              23333332223334488889999999999988776    468888888877654

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.67  E-value=1e-06  Score=80.19  Aligned_cols=133  Identities=11%  Similarity=0.065  Sum_probs=96.2

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhHH--HHHHHHHHH
Q 017343          162 KGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPF--FGYALAMFL  239 (373)
Q Consensus       162 ~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  239 (373)
                      .+.+++++++++|+...+..|...++.+|....++.+..+.+++.+..   ..+.....   .......  ++......+
T Consensus         4 ~~~l~~l~a~~~Wg~~~~~~k~~~~~~~P~~~~~~R~~~a~l~l~~~~---~~~~~~~~---~~~~~~~~~l~~~~~~~~   77 (295)
T PRK11689          4 KATLIGLIAILLWSTMVGLIRGVSESLGPVGGAAMIYSVSGLLLLLTV---GFPRLRQF---PKRYLLAGGLLFVSYEIC   77 (295)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHc---cccccccc---cHHHHHHHhHHHHHHHHH
Confidence            567889999999999999999999999999999999999888775432   11111111   1111111  111112222


Q ss_pred             HHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecC
Q 017343          240 FYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGG  300 (373)
Q Consensus       240 ~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~  300 (373)
                      ++....+.....++...++..++.|+++.++++++++|+++..+++|+++.++|+++....
T Consensus        78 ~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~  138 (295)
T PRK11689         78 LALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGG  138 (295)
T ss_pred             HHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecC
Confidence            3333333335567778888899999999999999999999999999999999999887753

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.65  E-value=2.2e-07  Score=84.34  Aligned_cols=133  Identities=11%  Similarity=-0.013  Sum_probs=99.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhcc---cCccchHHHHHHHHHHHHH-H
Q 017343           13 LLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQ---PLKAKWYYYLILGLIDVEG-N   88 (373)
Q Consensus        13 ~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~g~~~~~~-~   88 (373)
                      ..|.++++..+++|+......|...+  ..+|...... ..++.+++.++......   .....+...+..|++.... +
T Consensus       147 ~~G~ll~l~aa~~~a~~~v~~r~~~~--~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~lgv~~t~~~~  223 (293)
T PRK10532        147 LTGAALALGAGACWAIYILSGQRAGA--EHGPATVAIG-SLIAALIFVPIGALQAGEALWHWSILPLGLAVAILSTALPY  223 (293)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhc--cCCchHHHHH-HHHHHHHHHHHHHHccCcccCCHHHHHHHHHHHHHHHHHHH
Confidence            45788888888999988888887754  2345555444 34555556555444321   1112222335667766655 7


Q ss_pred             HHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeecc
Q 017343           89 FLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSD  148 (373)
Q Consensus        89 ~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~  148 (373)
                      .++++++++.+++.++++.++.|++..++++++++|+++..+++|..+.++|++......
T Consensus       224 ~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~  283 (293)
T PRK10532        224 SLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTI  283 (293)
T ss_pred             HHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence            788999999999999999999999999999999999999999999999999998886644

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.63  E-value=1.5e-07  Score=85.45  Aligned_cols=132  Identities=11%  Similarity=-0.090  Sum_probs=100.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc-c----cCccchHHHHHHHHHHHHH
Q 017343           13 LLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR-Q----PLKAKWYYYLILGLIDVEG   87 (373)
Q Consensus        13 ~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~-~----~~~~~~~~~~~~g~~~~~~   87 (373)
                      ..|.++++..+++|+......|...+   .++...+.+.+.++.+.+.++..... .    .....|......++++...
T Consensus       149 ~~G~l~~l~a~~~~a~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~  225 (292)
T PRK11272        149 PWGAILILIASASWAFGSVWSSRLPL---PVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSII  225 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCC---CcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHH
Confidence            45777777778888877777776542   22455667777777777766644332 1    1234455666667765544


Q ss_pred             -HHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeec
Q 017343           88 -NFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFS  147 (373)
Q Consensus        88 -~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~  147 (373)
                       ..+++.++++.+++.++++.++.|++.+++++++++|+++..+++|.++.+.|+++....
T Consensus       226 ~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~  286 (292)
T PRK11272        226 AISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLG  286 (292)
T ss_pred             HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence             888899999999999999999999999999999999999999999999999999887653

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=98.61  E-value=8.4e-07  Score=78.04  Aligned_cols=215  Identities=14%  Similarity=0.177  Sum_probs=122.6

Q ss_pred             HHHHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCCCCC----
Q 017343           84 DVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSS----  159 (373)
Q Consensus        84 ~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~----  159 (373)
                      ...+..+.|.|+.+.|++..+.+..++.+..++++..+++||++....+|+.++++|-.+++.......+.....+    
T Consensus        74 m~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~el~~~  153 (335)
T KOG2922|consen   74 MIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEEVWEL  153 (335)
T ss_pred             HHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccccHHHHHHH
Confidence            3444888899999999999999999999999999999999999999999999999999999875543222110000    


Q ss_pred             -CchhhH-HHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHH----HHH---HHhhccccccccccccchhHH
Q 017343          160 -PRKGDA-LVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISA----VQI---SILERKELQSIHWSAGAALPF  230 (373)
Q Consensus       160 -~~~G~~-l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~~~~~~~~~~~~~  230 (373)
                       ...+.+ +...-.+...+-....+..-...++..+...+.+.|++-..    +..   ..+.+.  .+...+ ..+..+
T Consensus       154 ~~~~~Fliy~~~iil~~~il~~~~~p~~g~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~--~ql~~~-~ty~~~  230 (335)
T KOG2922|consen  154 ATEPGFLVYVIIIILIVLILIFFYAPRYGQTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGN--NQLFYP-LTWIFL  230 (335)
T ss_pred             hcCccHHHHHHHHHHHHHHHheeecccccccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCC--cccccH-HHHHHH
Confidence             001111 01111111111111111111122334444444444422110    000   111111  111111 223333


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcchhHHH-HHHHHHHHHHHHHHHHHhcccc--c----HHHHHHHHHHHHHhheeecCC
Q 017343          231 FGYALAMFLFYSFVPILLKTNGATMLN-LSLLTSDMWAVLIRIGAYHEKV--D----WLYFIAFAAVAVGLIIYSGGD  301 (373)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~pv~~~l~~~~~~~e~~--~----~~~~~G~~li~~g~~l~~~~~  301 (373)
                      +....+.........++++...+..+. +...+-..++++.+.++|.|.-  +    ....+|...++.|+++....+
T Consensus       231 l~~~~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~flL~~~k  308 (335)
T KOG2922|consen  231 LVVATCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFLGIFLLHRTK  308 (335)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhheeeEeeeec
Confidence            333333333334445555666665555 4455667888899999998763  3    335789999999999986543

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.60  E-value=2.4e-06  Score=66.92  Aligned_cols=122  Identities=15%  Similarity=0.063  Sum_probs=83.3

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHH
Q 017343          162 KGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFY  241 (373)
Q Consensus       162 ~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (373)
                      .|.++.+.+.++.+..+++.|+-.++.+....... . ...    ... ..        +...+.+..+.+.++++++|+
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~-~-~~~----~~~-~~--------~p~~~i~lgl~~~~la~~~w~   66 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHAWD-F-IAA----LLA-FG--------LALRAVLLGLAGYALSMLCWL   66 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccchhH-H-HHH----HHH-Hh--------ccHHHHHHHHHHHHHHHHHHH
Confidence            47889999999999999999998876654332211 0 000    000 10        000122344455555565554


Q ss_pred             HHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH--HhcccccHHHHHHHHHHHHHhheeecCCC
Q 017343          242 SFVPILLKTNGATMLNLSLLTSDMWAVLIRIG--AYHEKVDWLYFIAFAAVAVGLIIYSGGDK  302 (373)
Q Consensus       242 ~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~--~~~e~~~~~~~~G~~li~~g~~l~~~~~~  302 (373)
                      ..    +++.+...+.......+++..+.++.  ++||++|+.+++|+++|++|+++.+++++
T Consensus        67 ~a----L~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~  125 (129)
T PRK02971         67 KA----LRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT  125 (129)
T ss_pred             HH----HHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence            44    48888888888777777778777774  79999999999999999999999876443

>PRK13499 rhamnose-proton symporter; Provisional

Probab=98.59  E-value=1.1e-05  Score=73.58  Aligned_cols=284  Identities=13%  Similarity=0.054  Sum_probs=157.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHH----HHHhc------ccCccchHHHHHH
Q 017343           11 KTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSL----MLYRR------QPLKAKWYYYLIL   80 (373)
Q Consensus        11 ~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~----~~~~~------~~~~~~~~~~~~~   80 (373)
                      +...|++...+..+||++.+...|. .+.   -+++..+.-..+..-++.++    +..+.      ..+...+..-++.
T Consensus         4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~---w~wE~~W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~   79 (345)
T PRK13499          4 AIILGIIWHLIGGASSGSFYAPFKK-VKK---WSWETMWSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLF   79 (345)
T ss_pred             hhHHHHHHHHHHHHHhhcccccccc-cCC---CchhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHH
Confidence            4566888888899999999888887 332   12222211111111111221    11111      2344555566677


Q ss_pred             HHHHHHHHHHHHHHHhccchhHHHHhh-cchhhHHHHHHHHHhcccc---cee----eeehhhhheecceeeee----cc
Q 017343           81 GLIDVEGNFLVVKAYQYTSLTSVMLLD-CWTIPCVMFLTWIFLKTKY---RYK----KITGVVVCVAGLVTVIF----SD  148 (373)
Q Consensus        81 g~~~~~~~~~~~~al~~~~~~~~~~i~-~~~p~~~~ll~~~~l~e~~---~~~----~~~~~~l~~~Gv~l~~~----~~  148 (373)
                      |++-..++..++.++++..++.+..+. .++.+...++..++++|-.   +..    -.+|++++++|+++...    .+
T Consensus        80 G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~  159 (345)
T PRK13499         80 GALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKE  159 (345)
T ss_pred             HHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence            888888899999999999999987764 4566677788999988754   322    45788889999999887    44


Q ss_pred             CccCCC-CCCCCCchhhHHHHHHHHHHHHHH-------HHHHHHh-ccCChhHHHHHHHH---HHHHHHHHHHHHh---h
Q 017343          149 VHAGDR-GSGSSPRKGDALVIAGATLYAVSN-------VSEEFLV-KKADRIELMAFLGL---FGGIISAVQISIL---E  213 (373)
Q Consensus       149 ~~~~~~-~~~~~~~~G~~l~l~a~~~~a~~~-------v~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~  213 (373)
                      ....++ +...+...|+++++++.+.+++|.       ...+... ...++......+..   .+.++.-......   .
T Consensus       160 ~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k  239 (345)
T PRK13499        160 RKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAK  239 (345)
T ss_pred             cccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            321111 223456789999999999999999       4443321 22343332222222   3333222211121   1


Q ss_pred             ccccc-cccccc----cchhHHHHHHHHHHHHHH---HHHHHHhhc---chhH-HHHHHHHHHHHHHHHHHHHhccccc-
Q 017343          214 RKELQ-SIHWSA----GAALPFFGYALAMFLFYS---FVPILLKTN---GATM-LNLSLLTSDMWAVLIRIGAYHEKVD-  280 (373)
Q Consensus       214 ~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~---~~~~~~~~~---~a~~-~~~~~~~~pv~~~l~~~~~~~e~~~-  280 (373)
                      ....+ ..+...    .....+++ .++...|+.   .....-...   .+.. -.+.+.+..+++.+.+++ ++|.=+ 
T Consensus       240 ~~~~~~~~~~~~~~~~~~~n~l~~-~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi~-lkE~K~a  317 (345)
T PRK13499        240 NKDLSLKADFSLAKPLLITNVLLS-ALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGLV-LKEWKGA  317 (345)
T ss_pred             CCCcccchhccccchhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhhh-hhhccCC
Confidence            11111 011110    01121111 111111111   111111222   1111 113445667999999995 998855 


Q ss_pred             -----HHHHHHHHHHHHHhheeecC
Q 017343          281 -----WLYFIAFAAVAVGLIIYSGG  300 (373)
Q Consensus       281 -----~~~~~G~~li~~g~~l~~~~  300 (373)
                           ...++|.+++++|.++....
T Consensus       318 ~~k~~~~l~~G~vliI~g~~lig~~  342 (345)
T PRK13499        318 SRRPVRVLSLGCVVIILAANIVGLG  342 (345)
T ss_pred             CccchhHHHHHHHHHHHHHHHHhhc
Confidence                 56688999999998876543

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.51  E-value=9.7e-07  Score=71.96  Aligned_cols=130  Identities=19%  Similarity=0.188  Sum_probs=105.2

Q ss_pred             HHHHHHHHHHHHHHHHHhhHHHHhc-----cCCCcHHHHHHHHHHHHHHHHHHHHHhc--c-------c-------Cccc
Q 017343           15 GLGLGQFLSLLITSTGFSSSELARK-----GINAPTSQSFFNYVLLAIVYGSLMLYRR--Q-------P-------LKAK   73 (373)
Q Consensus        15 ~~~l~~~~~l~~~~~~~~~~~l~~~-----~~~~p~~~~~~r~~~~~~~l~~~~~~~~--~-------~-------~~~~   73 (373)
                      |.++++...++.+.-....+.+.++     ...+|..+..+....+.+++.+......  .       .       ....
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            4567777888888888888887766     4667888888888888888877654432  0       0       1233


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceee
Q 017343           74 WYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTV  144 (373)
Q Consensus        74 ~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~  144 (373)
                      +...+..|++.+..++..+..++++++...+++.....+++.++++++++|+++..+++|+.++++|+++-
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Y  151 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLY  151 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhee
Confidence            44455567777777999999999999999999999999999999999999999999999999999998763

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.47  E-value=1.3e-06  Score=79.68  Aligned_cols=136  Identities=13%  Similarity=0.038  Sum_probs=97.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHHhccC-CCcHHHHHHHHHHHHHHHHHHHH-Hhc---------ccCccchHHHHHHH
Q 017343           13 LLGLGLGQFLSLLITSTGFSSSELARKGI-NAPTSQSFFNYVLLAIVYGSLML-YRR---------QPLKAKWYYYLILG   81 (373)
Q Consensus        13 ~~~~~l~~~~~l~~~~~~~~~~~l~~~~~-~~p~~~~~~r~~~~~~~l~~~~~-~~~---------~~~~~~~~~~~~~g   81 (373)
                      ..|.++++..+++|+......|...++.. .......++-.....+.+..... ...         ......|...+..+
T Consensus       142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  221 (299)
T PRK11453        142 MLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLA  221 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHH
Confidence            46888888899999999998888754321 12223334444443333322211 111         11223455566667


Q ss_pred             HHHHHH-HHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeecc
Q 017343           82 LIDVEG-NFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSD  148 (373)
Q Consensus        82 ~~~~~~-~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~  148 (373)
                      ++.... ..+++.++++.+++.++++..+.|++..++++++++|+++..+++|..+.++|+++...+.
T Consensus       222 i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~  289 (299)
T PRK11453        222 FVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL  289 (299)
T ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence            666655 7788899999999999999999999999999999999999999999999999998876644

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.46  E-value=1.3e-05  Score=74.62  Aligned_cols=134  Identities=9%  Similarity=0.078  Sum_probs=92.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccCC-hhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHH
Q 017343          165 ALVIAGATLYAVSNVSEEFLVKKAD-RIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSF  243 (373)
Q Consensus       165 ~l~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (373)
                      .+.+.--.+...+++.+|...+..+ |+.++.++++++.++..+.. .......++.......+..++..++.....+..
T Consensus        52 ~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~llp~gl~~~~~~~~  130 (350)
T PTZ00343         52 LLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYW-ATGFRKIPRIKSLKLFLKNFLPQGLCHLFVHFG  130 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHH-HhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            3444444556677888888889999 99999999999987754433 222221122210011111222222222222333


Q ss_pred             HHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeec
Q 017343          244 VPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSG  299 (373)
Q Consensus       244 ~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  299 (373)
                      ....++..++...+++..++|++++++++++++|+++..+++|.+++++|+.+...
T Consensus       131 ~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~  186 (350)
T PTZ00343        131 AVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASV  186 (350)
T ss_pred             HHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheec
Confidence            44566899999999999999999999999999999999999999999999999764

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.28  E-value=6.5e-07  Score=68.35  Aligned_cols=64  Identities=11%  Similarity=0.021  Sum_probs=57.6

Q ss_pred             HHHHH-HHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeee
Q 017343           83 IDVEG-NFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIF  146 (373)
Q Consensus        83 ~~~~~-~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~  146 (373)
                      ++... .+++..+++..|.+.+..+.++.++++++++++++|||+++++++|+.++++|++++..
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~  109 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS  109 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            44444 77777999999999999999999999999999999999999999999999999987754

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.22  E-value=2.3e-05  Score=60.29  Aligned_cols=59  Identities=15%  Similarity=0.215  Sum_probs=50.0

Q ss_pred             HHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCCC
Q 017343          243 FVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDK  302 (373)
Q Consensus       243 ~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  302 (373)
                      ......++.++ .+.....+.|+++.++++++++|+++..+++|.+++++|+++..+.+.
T Consensus        51 ~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~  109 (113)
T PF13536_consen   51 LFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDL  109 (113)
T ss_pred             HHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence            33444577775 677888899999999999999999999999999999999999887553

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.21  E-value=6.1e-05  Score=68.76  Aligned_cols=123  Identities=8%  Similarity=-0.034  Sum_probs=85.3

Q ss_pred             HHHHHHHHHHHHhcc-CChhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHHHHHhhc
Q 017343          173 LYAVSNVSEEFLVKK-ADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPILLKTN  251 (373)
Q Consensus       173 ~~a~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (373)
                      +...+++++|...++ ..|..++.+.+.++.+...+.. .......++.+...+......+..  ....+......+++.
T Consensus        13 ~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~l~~~   89 (302)
T TIGR00817        13 LNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSW-SSGLPKRLKISSALLKLLLPVAIV--HTIGHVTSNVSLSKV   89 (302)
T ss_pred             HHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHH-HhCCCCCCCCCHHHHHHHHHHHHH--HHHHHHHHHHHHHhc
Confidence            344556778888877 5588888888888876654331 111111122222222222233322  333445556667999


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheee
Q 017343          252 GATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYS  298 (373)
Q Consensus       252 ~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~  298 (373)
                      ++...++...+.|+++.++++++++|+++..+++|.+++++|+++..
T Consensus        90 s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~  136 (302)
T TIGR00817        90 AVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS  136 (302)
T ss_pred             cHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc
Confidence            99999999999999999999999999999999999999999998754

specificities overlap.

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.21  E-value=7.7e-06  Score=74.04  Aligned_cols=131  Identities=11%  Similarity=0.065  Sum_probs=95.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHH---HHHHHHHHHHHHhcccCccchHHHHHHHHHHHHHH
Q 017343           12 TLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYV---LLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEGN   88 (373)
Q Consensus        12 ~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   88 (373)
                      .++|++.+++.++.++......|...    .+|...++....   +..+++.......++...+..+...+.|++...++
T Consensus       150 ~~~Gi~~~l~sg~~y~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~ia~  225 (290)
T TIGR00776       150 FKKGILLLLMSTIGYLVYVVVAKAFG----VDGLSVLLPQAIGMVIGGIIFNLGHILAKPLKKYAILLNILPGLMWGIGN  225 (290)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHcC----CCcceehhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHH
Confidence            46799999999999988888888652    356655433333   33333322221111222334445556788865558


Q ss_pred             HHHHHHHh-ccchhHHHHhhcchhhHHHHHHHHHhccccceeee----ehhhhheecceeeee
Q 017343           89 FLVVKAYQ-YTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKI----TGVVVCVAGLVTVIF  146 (373)
Q Consensus        89 ~~~~~al~-~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~----~~~~l~~~Gv~l~~~  146 (373)
                      .+++.+.+ +.+++.+.++.+..|+...+++++++||+.+++++    +|.++.+.|+.++..
T Consensus       226 ~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       226 FFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             HHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence            88889999 99999999999999999999999999999999999    999999888877643

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.20  E-value=5.1e-05  Score=66.28  Aligned_cols=138  Identities=18%  Similarity=0.161  Sum_probs=100.5

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhcc-ccccccccccchhHHHHHHHHHHH
Q 017343          161 RKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERK-ELQSIHWSAGAALPFFGYALAMFL  239 (373)
Q Consensus       161 ~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  239 (373)
                      ..|+++++.+-+.|+..-.+.| ..+..++.++.++..+++..++.......... ...+....+..+..+.....-...
T Consensus         6 ~~Gil~~l~Ay~lwG~lp~y~k-ll~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~~   84 (293)
T COG2962           6 RKGILLALLAYLLWGLLPLYFK-LLEPLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIGL   84 (293)
T ss_pred             cchhHHHHHHHHHHHHHHHHHH-HHccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence            4799999999999999999987 56789999999999999998886665554332 111111122222222221111112


Q ss_pred             HHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeec
Q 017343          240 FYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSG  299 (373)
Q Consensus       240 ~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  299 (373)
                      -+....+...+..+.-+++-.+++|.+.+++|.++++|+++..|++..++..+|+....+
T Consensus        85 nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~  144 (293)
T COG2962          85 NWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTW  144 (293)
T ss_pred             HHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence            222233445777888899999999999999999999999999999999999999987664

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.17  E-value=8.6e-05  Score=56.69  Aligned_cols=60  Identities=18%  Similarity=0.238  Sum_probs=52.0

Q ss_pred             HHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheee
Q 017343          239 LFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYS  298 (373)
Q Consensus       239 ~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~  298 (373)
                      ..+.....++++.+...+.....+.++++.++++++|||+++..+++|.+++++|+++..
T Consensus        49 l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         49 LAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            344455566688999999888889999999999999999999999999999999998754

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=98.11  E-value=8.2e-05  Score=57.16  Aligned_cols=56  Identities=9%  Similarity=0.191  Sum_probs=44.5

Q ss_pred             HHHhhcchhHHHHH-HHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCC
Q 017343          246 ILLKTNGATMLNLS-LLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGD  301 (373)
Q Consensus       246 ~~~~~~~a~~~~~~-~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  301 (373)
                      ..+++.+..++-.. .-+..+.+.+.++++|+|++|+.+++|+.+|++|+++.+...
T Consensus        49 ~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         49 FAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            33466666555444 345688889999999999999999999999999999986544

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.99  E-value=0.00055  Score=54.42  Aligned_cols=131  Identities=19%  Similarity=0.133  Sum_probs=88.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhccCC-hhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHH
Q 017343          163 GDALVIAGATLYAVSNVSEEFLVKKAD-RIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFY  241 (373)
Q Consensus       163 G~~l~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (373)
                      ..++++.+..+-++...++.++.++.+ |+......+..+.+.+.+...+.+......  .....++.+++..++.... 
T Consensus         2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~--~~~~p~w~~lGG~lG~~~V-   78 (138)
T PF04657_consen    2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSLAS--LSSVPWWAYLGGLLGVFFV-   78 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccch--hccCChHHhccHHHHHHHH-
Confidence            357889999999999999999998876 999999999999999877776666542222  2222233333433332222 


Q ss_pred             HHHHHHHhhcchhHHHH-HHHHHHHHHHHHHHH----HhcccccHHHHHHHHHHHHHhhe
Q 017343          242 SFVPILLKTNGATMLNL-SLLTSDMWAVLIRIG----AYHEKVDWLYFIAFAAVAVGLII  296 (373)
Q Consensus       242 ~~~~~~~~~~~a~~~~~-~~~~~pv~~~l~~~~----~~~e~~~~~~~~G~~li~~g~~l  296 (373)
                      .......++.++..... ...-+.+.+.+++.+    .-.+++++.+++|.+++++|+++
T Consensus        79 ~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   79 LSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            22333346666655554 344556677777775    23477999999999999999864

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.97  E-value=4.8e-05  Score=59.56  Aligned_cols=118  Identities=17%  Similarity=0.172  Sum_probs=80.6

Q ss_pred             HHHHHHHHHHHHHHHHHhhHHHHhc-cCCCcHHHHHHHHHHHHHHHHHHHHHhcccCccchHHHHHHHHHHHHH-HHHHH
Q 017343           15 GLGLGQFLSLLITSTGFSSSELARK-GINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEG-NFLVV   92 (373)
Q Consensus        15 ~~~l~~~~~l~~~~~~~~~~~l~~~-~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~   92 (373)
                      ++++..+..++-+....+-|+-.++ +..+... .  .  ...+..    .      .. ...++..|+..... ..++.
T Consensus         3 ~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~-~--~--~~~~~~----~------~~-p~~~i~lgl~~~~la~~~w~   66 (129)
T PRK02971          3 GYLWGLASVLLASVAQLSLKWGMSRLPLLSHAW-D--F--IAALLA----F------GL-ALRAVLLGLAGYALSMLCWL   66 (129)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhhCCCccchh-H--H--HHHHHH----H------hc-cHHHHHHHHHHHHHHHHHHH
Confidence            4556666666667777777766554 2221111 1  1  111100    0      11 11245556655555 88888


Q ss_pred             HHHhccchhHHHHhhcchhhHHHHHHHH--Hhccccceeeeehhhhheecceeeeecc
Q 017343           93 KAYQYTSLTSVMLLDCWTIPCVMFLTWI--FLKTKYRYKKITGVVVCVAGLVTVIFSD  148 (373)
Q Consensus        93 ~al~~~~~~~~~~i~~~~p~~~~ll~~~--~l~e~~~~~~~~~~~l~~~Gv~l~~~~~  148 (373)
                      .+++..+++.+..+.+..+.++.+.++.  +++|+++..+++|++++++|++++..++
T Consensus        67 ~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~  124 (129)
T PRK02971         67 KALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT  124 (129)
T ss_pred             HHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence            9999999999999999998888888875  8999999999999999999999987643

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=97.97  E-value=0.00069  Score=61.10  Aligned_cols=140  Identities=15%  Similarity=0.173  Sum_probs=93.3

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhcc-CChhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHH
Q 017343          161 RKGDALVIAGATLYAVSNVSEEFLVKK-ADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFL  239 (373)
Q Consensus       161 ~~G~~l~l~a~~~~a~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (373)
                      ..+..+.+..++.|+......+...++ .+...........+.+.. ......+.....+....  .....+...+....
T Consensus         6 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~   82 (292)
T COG0697           6 LLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLL-LPLLLLEPRGLRPALRP--WLLLLLLALLGLAL   82 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHH-HHHHHhhcccccccccc--hHHHHHHHHHHHHH
Confidence            467788888889999999999988776 444445554666565552 22212211101111111  11222222333333


Q ss_pred             HHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHH-HHhcccccHHHHHHHHHHHHHhheeecCCCC
Q 017343          240 FYSFVPILLKTNGATMLNLSLLTSDMWAVLIRI-GAYHEKVDWLYFIAFAAVAVGLIIYSGGDKD  303 (373)
Q Consensus       240 ~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~-~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~  303 (373)
                      .+.......++.++.......++.|++..++++ ++++|+++..++.|..+.+.|+++.......
T Consensus        83 ~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~  147 (292)
T COG0697          83 PFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGG  147 (292)
T ss_pred             HHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCc
Confidence            334444456899999999999999999999997 6679999999999999999999999875544

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.78  E-value=0.0011  Score=60.56  Aligned_cols=139  Identities=11%  Similarity=0.028  Sum_probs=87.8

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhcc-CC-hhHHHHHHHHHHHHHHHHHHHHhhcc-ccccccccccchhHHHHHHHHHH
Q 017343          162 KGDALVIAGATLYAVSNVSEEFLVKK-AD-RIELMAFLGLFGGIISAVQISILERK-ELQSIHWSAGAALPFFGYALAMF  238 (373)
Q Consensus       162 ~G~~l~l~a~~~~a~~~v~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  238 (373)
                      .+.+++-.-+++-+...+....+.++ .+ |...+.+.+..-.++..+....-.+. .....  ....++.++..++.-.
T Consensus        13 ~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~--~~~~~w~y~lla~~Dv   90 (334)
T PF06027_consen   13 IVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKV--LKRPWWKYFLLALLDV   90 (334)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhh--cchhHHHHHHHHHHHH
Confidence            34444444445555555555544432 22 55555555554444443333222111 11111  1112233333345555


Q ss_pred             HHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCCC
Q 017343          239 LFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDK  302 (373)
Q Consensus       239 ~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  302 (373)
                      ..|.......++++.+.+++......++++++++++++++.++.+++|+++.++|+.+....+.
T Consensus        91 ~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~  154 (334)
T PF06027_consen   91 EANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDV  154 (334)
T ss_pred             HHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecc
Confidence            6666777777999999999999999999999999999999999999999999999998887653

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.77  E-value=0.00075  Score=51.17  Aligned_cols=54  Identities=11%  Similarity=0.104  Sum_probs=42.6

Q ss_pred             HhhcchhHHHHH-HHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCC
Q 017343          248 LKTNGATMLNLS-LLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGD  301 (373)
Q Consensus       248 ~~~~~a~~~~~~-~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  301 (373)
                      +++.+...+-.. .-+..+.+.+.++++|+|++++.+++|+.++++|+++.+...
T Consensus        51 l~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         51 LAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            455555554433 335578889999999999999999999999999999986544

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.70  E-value=0.0019  Score=51.32  Aligned_cols=137  Identities=13%  Similarity=0.083  Sum_probs=87.3

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhccCC-hhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHH
Q 017343          161 RKGDALVIAGATLYAVSNVSEEFLVKKAD-RIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFL  239 (373)
Q Consensus       161 ~~G~~l~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (373)
                      .+..++++.+..+-.+..-++.++.+..+ |.......+..|.+.+.....+.+..+......... ++.+.+..++.+.
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~p-wW~~~GG~lGa~~   82 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAP-WWAWIGGLLGAIF   82 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCc-hHHHHccchhhhh
Confidence            46778899999999999999999988766 888888888888888877666644432222112222 3333333333222


Q ss_pred             HHHHHHHHHhhcchhHH-HHHHHHHHHHHHHHHHHHhc----ccccHHHHHHHHHHHHHhheeec
Q 017343          240 FYSFVPILLKTNGATML-NLSLLTSDMWAVLIRIGAYH----EKVDWLYFIAFAAVAVGLIIYSG  299 (373)
Q Consensus       240 ~~~~~~~~~~~~~a~~~-~~~~~~~pv~~~l~~~~~~~----e~~~~~~~~G~~li~~g~~l~~~  299 (373)
                      . ........+.+++.. .....-+.+.+.+++.+=+.    .+++...++|++++++|+++...
T Consensus        83 v-t~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~  146 (150)
T COG3238          83 V-TSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARR  146 (150)
T ss_pred             h-hhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcc
Confidence            2 222222344444444 34444556666777665443    56899999999999999666544

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.66  E-value=0.00035  Score=63.78  Aligned_cols=132  Identities=17%  Similarity=0.206  Sum_probs=107.3

Q ss_pred             HHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHH--hc---------ccCccchHHHHHHHHH
Q 017343           15 GLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLY--RR---------QPLKAKWYYYLILGLI   83 (373)
Q Consensus        15 ~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~--~~---------~~~~~~~~~~~~~g~~   83 (373)
                      |+++..+..++-+..+...+.+.++...++....++...++.+..++....  ..         ...+..+...+...+.
T Consensus       155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~  234 (303)
T PF08449_consen  155 GIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLT  234 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHH
Confidence            888888888899999999988887766677888888888887777666554  22         1223345566677788


Q ss_pred             HHHHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeee
Q 017343           84 DVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIF  146 (373)
Q Consensus        84 ~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~  146 (373)
                      +..+..+.+.-.+..++...+++..+.-+++.+++.+++++++++.+|+|+++.+.|..+-..
T Consensus       235 ~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~  297 (303)
T PF08449_consen  235 GALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSY  297 (303)
T ss_pred             HHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHH
Confidence            888877777778899999999999999999999999999999999999999999999877554

; GO: 0055085 transmembrane transport

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=97.65  E-value=0.00033  Score=59.86  Aligned_cols=130  Identities=10%  Similarity=-0.018  Sum_probs=89.3

Q ss_pred             HHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc-cc--CccchHHHHHHHHHHHHH-HHH
Q 017343           15 GLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR-QP--LKAKWYYYLILGLIDVEG-NFL   90 (373)
Q Consensus        15 ~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~-~~--~~~~~~~~~~~g~~~~~~-~~~   90 (373)
                      |.++......||+..-...+....  ..+...-+..-+.+++++.+|+-.... ..  .+.-...-+..+++.... +.+
T Consensus       149 Gv~~Al~AG~~Wa~YIv~G~r~g~--~~~g~~g~a~gm~vAaviv~Pig~~~ag~~l~~p~ll~laLgvavlSSalPYsL  226 (292)
T COG5006         149 GVALALGAGACWALYIVLGQRAGR--AEHGTAGVAVGMLVAALIVLPIGAAQAGPALFSPSLLPLALGVAVLSSALPYSL  226 (292)
T ss_pred             HHHHHHHHhHHHHHHHHHcchhcc--cCCCchHHHHHHHHHHHHHhhhhhhhcchhhcChHHHHHHHHHHHHhcccchHH
Confidence            444444444455544444333321  344455566778888888888755443 11  122222333445555555 667


Q ss_pred             HHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeee
Q 017343           91 VVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIF  146 (373)
Q Consensus        91 ~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~  146 (373)
                      -..+++..|.....++.++.|.+.++.++++++|++|..||+++...+++..-.+.
T Consensus       227 EmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~l  282 (292)
T COG5006         227 EMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTL  282 (292)
T ss_pred             HHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcccc
Confidence            78999999999999999999999999999999999999999999988877765554

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.58  E-value=0.0027  Score=47.94  Aligned_cols=54  Identities=6%  Similarity=-0.028  Sum_probs=42.1

Q ss_pred             HHHHhhcchhHHHH-HHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheee
Q 017343          245 PILLKTNGATMLNL-SLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYS  298 (373)
Q Consensus       245 ~~~~~~~~a~~~~~-~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~  298 (373)
                      ...+++.+..++-. -.-+-.+.+.+.++++|+|++++.+++|+.+++.|++..+
T Consensus        53 s~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         53 SQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            34446666555533 3345578889999999999999999999999999998864

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=97.55  E-value=7.4e-05  Score=64.16  Aligned_cols=134  Identities=13%  Similarity=0.147  Sum_probs=83.6

Q ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhH---HHHHHH
Q 017343          159 SPRKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALP---FFGYAL  235 (373)
Q Consensus       159 ~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~  235 (373)
                      ..+.|..+..++ .++....+..++.. +.+|.......+++-.++..+.....-..-+.+.  ....+++   +.|+..
T Consensus        35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~-e~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~--g~R~~LiLRg~mG~tg  110 (346)
T KOG4510|consen   35 KPNLGLLLLTVS-YFFNSCMVVSTKVL-ENDPMELASFRLLVRMLITYPCLIYYMQPVIGPE--GKRKWLILRGFMGFTG  110 (346)
T ss_pred             CCccCceehhhH-HHHhhHHHhhhhhh-ccChhHhhhhhhhhehhhhheEEEEEeeeeecCC--CcEEEEEeehhhhhhH
Confidence            446899998888 77777777777665 4556665555544444443332221111100111  1111222   233222


Q ss_pred             HHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCC
Q 017343          236 AMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGD  301 (373)
Q Consensus       236 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  301 (373)
                      .+..     ++.+++.+-.-+.++...+|+++++++|++++|+.|....+|..+.+.|+++..+.+
T Consensus       111 vmlm-----yya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPp  171 (346)
T KOG4510|consen  111 VMLM-----YYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPP  171 (346)
T ss_pred             HHHH-----HHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCC
Confidence            2222     233356666666677777899999999999999999999999999999999988643

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.49  E-value=0.0027  Score=47.64  Aligned_cols=53  Identities=13%  Similarity=0.018  Sum_probs=41.8

Q ss_pred             HHhhcchhHHH-HHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeec
Q 017343          247 LLKTNGATMLN-LSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSG  299 (373)
Q Consensus       247 ~~~~~~a~~~~-~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  299 (373)
                      .+++.+..++- +-.-+-.+.+.+.++++|+|++|+.+++|+.++++|++..+.
T Consensus        49 al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         49 AMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            34555555443 334456888899999999999999999999999999998764

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=97.47  E-value=0.0004  Score=52.50  Aligned_cols=107  Identities=12%  Similarity=0.129  Sum_probs=79.2

Q ss_pred             HHHHHHHHHHHhhHHHHhc--cCCCcHHHHHHHHHHHHHHHHHHHHHhcccCccchHHHHHHHHHHHHHHHHHHHHHhcc
Q 017343           21 FLSLLITSTGFSSSELARK--GINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYT   98 (373)
Q Consensus        21 ~~~l~~~~~~~~~~~l~~~--~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~   98 (373)
                      +++++|+..+.+.|.-.+.  ....+   .  +..-....+           -. .+++.+.=+++..+...|++.+...
T Consensus         3 ~Vg~~WG~Tnpfik~g~~~~~~~~~~---~--~~~~~~~~L-----------l~-n~~y~ipf~lNq~GSv~f~~~L~~~   65 (113)
T PF10639_consen    3 LVGILWGCTNPFIKRGSSGLEKVKAS---L--QLLQEIKFL-----------LL-NPKYIIPFLLNQSGSVLFFLLLGSA   65 (113)
T ss_pred             eehHHhcCchHHHHHHHhhcCCccch---H--HHHHHHHHH-----------HH-hHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            4678999999999988765  22222   1  322222111           11 2345555667888899999999999


Q ss_pred             chhHHHHhh-cchhhHHHHHHHHHhccccceeeeehhhhheecceee
Q 017343           99 SLTSVMLLD-CWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTV  144 (373)
Q Consensus        99 ~~~~~~~i~-~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~  144 (373)
                      +.+.+.++. ++.-+++++.++++.+|..+++.++|+.+.++|+.+.
T Consensus        66 dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   66 DLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             CceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            999999995 7888888899988888888889999999999999875

Many members are annotated as potential transmembrane proteins.

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.45  E-value=0.0037  Score=46.46  Aligned_cols=55  Identities=16%  Similarity=0.164  Sum_probs=42.2

Q ss_pred             HHHhhcchhHH-HHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecC
Q 017343          246 ILLKTNGATML-NLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGG  300 (373)
Q Consensus       246 ~~~~~~~a~~~-~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~  300 (373)
                      ..+++.+..++ ++-.-+-.+.+.+.++++|+|++++.+++|..++++|++..+..
T Consensus        49 ~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          49 LALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             HHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence            33455554444 23344557888899999999999999999999999999987653

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.37  E-value=0.00017  Score=55.50  Aligned_cols=67  Identities=16%  Similarity=0.174  Sum_probs=57.2

Q ss_pred             HHHHHHHHHHHHHHhccchhHHHHhh-cchhhHHHHHHHHHhccccceeeeehhhhheecceeeeecc
Q 017343           82 LIDVEGNFLVVKAYQYTSLTSVMLLD-CWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSD  148 (373)
Q Consensus        82 ~~~~~~~~~~~~al~~~~~~~~~~i~-~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~  148 (373)
                      ++...+.+++..+++++|.+.+..+. ....+.+++++.++++|+++..+++++.++++|++++-..+
T Consensus        38 ~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         38 VMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            33344477788999999999998885 58888899999999999999999999999999998886543

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.37  E-value=0.0014  Score=57.60  Aligned_cols=128  Identities=14%  Similarity=0.099  Sum_probs=83.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHH-HHHHH-hcccCccchHHHHHHHHHHHHH
Q 017343           10 KKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYG-SLMLY-RRQPLKAKWYYYLILGLIDVEG   87 (373)
Q Consensus        10 ~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~-~~~~~-~~~~~~~~~~~~~~~g~~~~~~   87 (373)
                      ++..+++...+..++.+.....+.+.    ...+|+...+-. .+..++-. .+... ++....+..++-.+.|++...+
T Consensus       134 ~~~~kgi~~Ll~stigy~~Y~~~~~~----~~~~~~~~~lPq-aiGm~i~a~i~~~~~~~~~~~k~~~~nil~G~~w~ig  208 (269)
T PF06800_consen  134 SNMKKGILALLISTIGYWIYSVIPKA----FHVSGWSAFLPQ-AIGMLIGAFIFNLFSKKPFFEKKSWKNILTGLIWGIG  208 (269)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHh----cCCChhHhHHHH-HHHHHHHHHHHhhcccccccccchHHhhHHHHHHHHH
Confidence            45566766655555555444444443    334455444322 22222211 11111 3333444556667889998999


Q ss_pred             HHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeee----hhhhheecce
Q 017343           88 NFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKIT----GVVVCVAGLV  142 (373)
Q Consensus        88 ~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~----~~~l~~~Gv~  142 (373)
                      |++++.|.+....+.+..+.++.++...+.+.+++||+-+++++.    |+++.++|.+
T Consensus       209 nl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i  267 (269)
T PF06800_consen  209 NLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI  267 (269)
T ss_pred             HHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence            999999999999999999999999999999999999999988764    4444444443

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.31  E-value=0.0016  Score=59.01  Aligned_cols=119  Identities=13%  Similarity=-0.023  Sum_probs=79.0

Q ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHH
Q 017343          159 SPRKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMF  238 (373)
Q Consensus       159 ~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (373)
                      +...|.++++.++++.+....++|+...+.+....-.-...        ..          .-..+.++..++..+++..
T Consensus         4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~~~~--------~~----------~l~~~~W~~G~~~~~~g~~   65 (300)
T PF05653_consen    4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAGSGG--------RS----------YLRRPLWWIGLLLMVLGEI   65 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccchh--------hH----------HHhhHHHHHHHHHHhcchH
Confidence            45689999999999999999999997654432100000000        00          0000111112222222222


Q ss_pred             HHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeec
Q 017343          239 LFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSG  299 (373)
Q Consensus       239 ~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  299 (373)
                          +....+...++..++....+..++..+++..+++|+++...++|+++++.|..+...
T Consensus        66 ----~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~  122 (300)
T PF05653_consen   66 ----LNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVI  122 (300)
T ss_pred             ----HHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEE
Confidence                223334778888888888889999999999999999999999999999999976553

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.28  E-value=0.0027  Score=55.78  Aligned_cols=74  Identities=8%  Similarity=0.092  Sum_probs=64.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCCCCC
Q 017343          231 FGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDKDD  304 (373)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~  304 (373)
                      ....+.+...|.+....+++.++....+...++.+++.++++++++.+++..||++..++++|+.+........
T Consensus        21 ~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~   94 (244)
T PF04142_consen   21 AVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS   94 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence            33445566777777788899999999999999999999999999999999999999999999999998765443

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.20  E-value=0.0017  Score=49.00  Aligned_cols=67  Identities=18%  Similarity=0.248  Sum_probs=53.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhccchhHHHHhhc-chhhHHHHHHHHHhccccceeeeehhhhheecceee
Q 017343           78 LILGLIDVEGNFLVVKAYQYTSLTSVMLLDC-WTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTV  144 (373)
Q Consensus        78 ~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~-~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~  144 (373)
                      ...-+....+.++...++++.|.+.+..+.. ...+.+.+.+.+++||++++.+++++.+.++|++.+
T Consensus        39 ~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         39 ILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            3333333444777779999999999877665 556777899999999999999999999999999875

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=97.13  E-value=0.0051  Score=53.85  Aligned_cols=131  Identities=17%  Similarity=0.005  Sum_probs=67.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHH
Q 017343          163 GDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYS  242 (373)
Q Consensus       163 G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (373)
                      |.+.++.|+++++...+=.||.- ..|++.+..+.+....+...+...+.+.+.+.     ++  ..+.|..  ....|.
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~-~gDg~~fQw~~~~~i~~~g~~v~~~~~~p~f~-----p~--amlgG~l--W~~gN~   70 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFD-TGDGFFFQWVMCSGIFLVGLVVNLILGFPPFY-----PW--AMLGGAL--WATGNI   70 (254)
T ss_pred             CchhHHHHHHHhcccceeeEecc-CCCcHHHHHHHHHHHHHHHHHHHHhcCCCcce-----eH--HHhhhhh--hhcCce
Confidence            56788999999999998888653 45666666555555555444444443322211     11  1111100  001111


Q ss_pred             HHHHHHhhcchhHHHHH-HHHHHHHHHHHHHH-Hhcccc-----cHHHHHHHHHHHHHhheeecCCCC
Q 017343          243 FVPILLKTNGATMLNLS-LLTSDMWAVLIRIG-AYHEKV-----DWLYFIAFAAVAVGLIIYSGGDKD  303 (373)
Q Consensus       243 ~~~~~~~~~~a~~~~~~-~~~~pv~~~l~~~~-~~~e~~-----~~~~~~G~~li~~g~~l~~~~~~~  303 (373)
                      ...-+++..+-.+.-.+ ...+.+.+...+-+ +||+++     .+..++|++++++|..++..-|.+
T Consensus        71 ~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~  138 (254)
T PF07857_consen   71 LVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSE  138 (254)
T ss_pred             eehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCC
Confidence            11112222222222221 22234555555543 455442     567899999999999988765433

The region concerned is approximately 280 residues long.

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.12  E-value=0.00055  Score=51.37  Aligned_cols=63  Identities=10%  Similarity=0.062  Sum_probs=53.2

Q ss_pred             HHHHHHHHHHHHhccchhHHHHhhc-chhhHHHHHHHHHhccccceeeeehhhhheecceeeee
Q 017343           84 DVEGNFLVVKAYQYTSLTSVMLLDC-WTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIF  146 (373)
Q Consensus        84 ~~~~~~~~~~al~~~~~~~~~~i~~-~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~  146 (373)
                      ...+.++...+++.+|.+.+..+.. ...+.+.+.+.+++||++++.+++++.+.++|++.+-.
T Consensus        39 ~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         39 MIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            3344777779999999999877665 66777889999999999999999999999999988743

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.09  E-value=0.00049  Score=52.19  Aligned_cols=60  Identities=17%  Similarity=0.337  Sum_probs=53.0

Q ss_pred             HHHHHHHHHhccchhHHHHhh-cchhhHHHHHHHHHhccccceeeeehhhhheecceeeee
Q 017343           87 GNFLVVKAYQYTSLTSVMLLD-CWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIF  146 (373)
Q Consensus        87 ~~~~~~~al~~~~~~~~~~i~-~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~  146 (373)
                      +..+...+++..|.+.+..+. ....+.++++++++++|++++.+++|+.+.++|++++-.
T Consensus        43 sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         43 SFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            366677999999999998875 467788889999999999999999999999999999865

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.09  E-value=0.005  Score=48.91  Aligned_cols=125  Identities=15%  Similarity=0.200  Sum_probs=87.4

Q ss_pred             HHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhcc-----cCccchHHHHHHHHHHHHHHHHH
Q 017343           17 GLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQ-----PLKAKWYYYLILGLIDVEGNFLV   91 (373)
Q Consensus        17 ~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~-----~~~~~~~~~~~~g~~~~~~~~~~   91 (373)
                      +++++.-.+.+....++..+.+. ..+|+.-+++.+..+.+++..+....++     ..+.+||. ..-|+++.....+.
T Consensus         4 lla~~aG~~i~~q~~~N~~L~~~-~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~-~lGG~lG~~~V~~~   81 (138)
T PF04657_consen    4 LLALLAGALIALQAAFNGQLGKA-LGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWA-YLGGLLGVFFVLSN   81 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-hCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHH-hccHHHHHHHHHHH
Confidence            34444455666666666666653 2358999999999999888777655442     22334444 44788888888888


Q ss_pred             HHHHhccchhHHHHhhcchhhHHH-HHHHH----Hhccccceeeeehhhhheeccee
Q 017343           92 VKAYQYTSLTSVMLLDCWTIPCVM-FLTWI----FLKTKYRYKKITGVVVCVAGLVT  143 (373)
Q Consensus        92 ~~al~~~~~~~~~~i~~~~p~~~~-ll~~~----~l~e~~~~~~~~~~~l~~~Gv~l  143 (373)
                      .......+++....+.-+.=+... ++..+    .-++++++.+.+|+.+.++|+++
T Consensus        82 ~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   82 IILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            888899888888776555544444 66654    35688899999999999999864

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.99  E-value=0.00064  Score=50.47  Aligned_cols=65  Identities=12%  Similarity=0.122  Sum_probs=52.4

Q ss_pred             HHHHHHHHHHHHHHhccchhHHHHhhc-chhhHHHHHHHHHhccccceeeeehhhhheecceeeee
Q 017343           82 LIDVEGNFLVVKAYQYTSLTSVMLLDC-WTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIF  146 (373)
Q Consensus        82 ~~~~~~~~~~~~al~~~~~~~~~~i~~-~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~  146 (373)
                      +.......+.-.|++++|.+.+..+.. ...+.+.+.++++++|+++..+++++.+.++|++.+-.
T Consensus        38 v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          38 VGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL  103 (106)
T ss_pred             HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence            333444777779999999998866654 45566779999999999999999999999999987644

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=96.88  E-value=0.0046  Score=54.48  Aligned_cols=135  Identities=13%  Similarity=0.111  Sum_probs=104.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc---------ccCccchHHHHHH
Q 017343           10 KKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR---------QPLKAKWYYYLIL   80 (373)
Q Consensus        10 ~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~---------~~~~~~~~~~~~~   80 (373)
                      .+...|+.+....-++-+..+...+.+.+..-.+++.+.+.-.++..+.-...+....         ...+..++..++.
T Consensus       168 ~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~  247 (327)
T KOG1581|consen  168 ENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLY  247 (327)
T ss_pred             CCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHH
Confidence            4567888888888888888999988888765556677766666665555444443333         4456677889999


Q ss_pred             HHHHHHHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceee
Q 017343           81 GLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTV  144 (373)
Q Consensus        81 g~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~  144 (373)
                      +.++..++.+.|+-++.-.+-.-+.+..+--++..+++.+.++.+++..+|+|+.+.+.|+.+=
T Consensus       248 s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~  311 (327)
T KOG1581|consen  248 STCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLE  311 (327)
T ss_pred             HHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHH
Confidence            9999999888887777766666666777788999999999999999999999999888877653

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.70  E-value=0.028  Score=41.36  Aligned_cols=46  Identities=9%  Similarity=0.028  Sum_probs=23.1

Q ss_pred             HHHHhhcchhHHHH-HHHHHHHHHHHHHHHHhcccccHHHHHHHHHH
Q 017343          245 PILLKTNGATMLNL-SLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAV  290 (373)
Q Consensus       245 ~~~~~~~~a~~~~~-~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li  290 (373)
                      ..++++.+..++-. ..-+..+...+.++++|||++|+.+++|+.+|
T Consensus        47 ~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   47 SLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            34446666666543 33466889999999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>TIGR00803 nst UDP-galactose transporter

Probab=96.66  E-value=0.012  Score=50.96  Aligned_cols=67  Identities=15%  Similarity=0.227  Sum_probs=58.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheeccee
Q 017343           77 YLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVT  143 (373)
Q Consensus        77 ~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l  143 (373)
                      .....+.+..+..+....++|.+....++...+.++++.+++.++++|+++..+|+|+.+.+.|+.+
T Consensus       155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            4444555666677888999999999999999999999999999999999999999999999998764

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.44  E-value=0.016  Score=42.63  Aligned_cols=51  Identities=14%  Similarity=0.116  Sum_probs=29.5

Q ss_pred             HHHHHHHHHHhccchhHHHHhh-cchhhHHHHHHHHHhccccceeeeehhhh
Q 017343           86 EGNFLVVKAYQYTSLTSVMLLD-CWTIPCVMFLTWIFLKTKYRYKKITGVVV  136 (373)
Q Consensus        86 ~~~~~~~~al~~~~~~~~~~i~-~~~p~~~~ll~~~~l~e~~~~~~~~~~~l  136 (373)
                      ...+++..++++.|.+.+..+. .+..+.+.+.+.++++|+++..+++|+.+
T Consensus        41 ~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~l   92 (93)
T PF00893_consen   41 LSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGL   92 (93)
T ss_dssp             HHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHH
T ss_pred             HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheee
Confidence            3367777999999999997765 48888899999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=96.35  E-value=0.78  Score=41.75  Aligned_cols=166  Identities=11%  Similarity=0.082  Sum_probs=100.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc----------ccCccchHHHHHHHH
Q 017343           13 LLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR----------QPLKAKWYYYLILGL   82 (373)
Q Consensus        13 ~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~----------~~~~~~~~~~~~~g~   82 (373)
                      ..|+++-.+-+++.++.+.-.|....    -.++..+.-..+..-++.|++.-.-          ..+........+.|+
T Consensus         6 i~Gii~h~iGg~~~~sfy~P~kkvk~----WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~   81 (344)
T PF06379_consen    6 ILGIIFHAIGGFASGSFYVPFKKVKG----WSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGV   81 (344)
T ss_pred             HHHHHHHHHHHHHhhhhccchhhcCC----ccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHH
Confidence            44555555555555555555554332    2355554444444545555533211          333445566677788


Q ss_pred             HHHHHHHHHHHHHhccchhHHH-HhhcchhhHHHHHHHHHhc-------cccceeeeehhhhheecceeeeeccCccCC-
Q 017343           83 IDVEGNFLVVKAYQYTSLTSVM-LLDCWTIPCVMFLTWIFLK-------TKYRYKKITGVVVCVAGLVTVIFSDVHAGD-  153 (373)
Q Consensus        83 ~~~~~~~~~~~al~~~~~~~~~-~i~~~~p~~~~ll~~~~l~-------e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~-  153 (373)
                      +-..+...+=.+++|+..+..+ +...+...+-.++-.++.+       .+-....++|++++++|+.+....+...+. 
T Consensus        82 lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke~~  161 (344)
T PF06379_consen   82 LWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKEKE  161 (344)
T ss_pred             HHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhhhh
Confidence            8777788888999998777653 3334444454555455433       222345789999999999998865432221 


Q ss_pred             ---CCCCCCCchhhHHHHHHHHHHHHHHHHHH
Q 017343          154 ---RGSGSSPRKGDALVIAGATLYAVSNVSEE  182 (373)
Q Consensus       154 ---~~~~~~~~~G~~l~l~a~~~~a~~~v~~~  182 (373)
                         +....+.-.|.++++++.+..++.+.-..
T Consensus       162 ~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~  193 (344)
T PF06379_consen  162 LGEEAKEFNFKKGLIIAVLSGVMSACFNFGLD  193 (344)
T ss_pred             hccchhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence               11234456899999999999999887655

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.20  E-value=0.038  Score=41.87  Aligned_cols=109  Identities=11%  Similarity=0.095  Sum_probs=64.6

Q ss_pred             HHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHHHHH
Q 017343          169 AGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPILL  248 (373)
Q Consensus       169 ~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (373)
                      +-+++|++.+-+.||..+..++..-.. +..-....     ++.        +  +.....++..-.+...|+...    
T Consensus         3 ~Vg~~WG~Tnpfik~g~~~~~~~~~~~-~~~~~~~~-----Ll~--------n--~~y~ipf~lNq~GSv~f~~~L----   62 (113)
T PF10639_consen    3 LVGILWGCTNPFIKRGSSGLEKVKASL-QLLQEIKF-----LLL--------N--PKYIIPFLLNQSGSVLFFLLL----   62 (113)
T ss_pred             eehHHhcCchHHHHHHHhhcCCccchH-HHHHHHHH-----HHH--------h--HHHHHHHHHHHHHHHHHHHHH----
Confidence            346889999999999876554332221 21111111     111        1  111222333333444554444    


Q ss_pred             hhcchhHHH-HHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhhee
Q 017343          249 KTNGATMLN-LSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIY  297 (373)
Q Consensus       249 ~~~~a~~~~-~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~  297 (373)
                      .+.+-+.+. +...+.-+++++.++++.+|..+...++|++++++|+.+.
T Consensus        63 ~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   63 GSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             hcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            444433333 3345668999999998888888999999999999998763

Many members are annotated as potential transmembrane proteins.

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=96.05  E-value=0.016  Score=49.09  Aligned_cols=78  Identities=8%  Similarity=0.166  Sum_probs=68.8

Q ss_pred             cCccchHHHHHHHHHHHHHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeee
Q 017343           69 PLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIF  146 (373)
Q Consensus        69 ~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~  146 (373)
                      +-+..|+.+.++++.++.++++.+.-..+-++-..+++..+--.|+.+.+.++++..++.+||+|..+.+.|...=..
T Consensus       236 RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~  313 (337)
T KOG1580|consen  236 RHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVV  313 (337)
T ss_pred             hccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhh
Confidence            345567888899999999999999999998888899999999999999999999999999999999999888766443

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=96.00  E-value=0.0093  Score=54.01  Aligned_cols=134  Identities=11%  Similarity=0.127  Sum_probs=91.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHHh--ccCCCcHHHHHHHHHHHHHHHH-HHHHHhc--cc-------CccchHHHHHH
Q 017343           13 LLGLGLGQFLSLLITSTGFSSSELAR--KGINAPTSQSFFNYVLLAIVYG-SLMLYRR--QP-------LKAKWYYYLIL   80 (373)
Q Consensus        13 ~~~~~l~~~~~l~~~~~~~~~~~l~~--~~~~~p~~~~~~r~~~~~~~l~-~~~~~~~--~~-------~~~~~~~~~~~   80 (373)
                      +.|.+......+..+.-..+.+.+.+  ....+++.+..+-.-++.++++ |+.....  ..       ..-........
T Consensus       162 ~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (316)
T KOG1441|consen  162 LFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLLN  241 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHHH
Confidence            45555555555666666666666653  2334667777666667777777 7655433  11       11112223334


Q ss_pred             HHHHHHHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeee
Q 017343           81 GLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIF  146 (373)
Q Consensus        81 g~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~  146 (373)
                      .++.+..|...|..+..+++-+.++.....=.++.+.++++++++.++.+.+|..++++|+++-..
T Consensus       242 sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~  307 (316)
T KOG1441|consen  242 SVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSR  307 (316)
T ss_pred             HHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHH
Confidence            466666688889999999999999998888888888888888888888888888888888876543

>PRK13499 rhamnose-proton symporter; Provisional

Probab=95.99  E-value=0.092  Score=48.30  Aligned_cols=139  Identities=14%  Similarity=0.070  Sum_probs=73.5

Q ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHH--HHHHHHHHHH-HHHHhhcccccccc-ccccchhHHHHHH
Q 017343          159 SPRKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFL--GLFGGIISAV-QISILERKELQSIH-WSAGAALPFFGYA  234 (373)
Q Consensus       159 ~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~  234 (373)
                      +...|+++.+++++|++...+-.|+ .++- +++.. |.  .+++.++... ...+..+.-.+-.. .+...+..-+..+
T Consensus         4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~w-~wE~~-W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G   80 (345)
T PRK13499          4 AIILGIIWHLIGGASSGSFYAPFKK-VKKW-SWETM-WSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFG   80 (345)
T ss_pred             hhHHHHHHHHHHHHHhhcccccccc-cCCC-chhHH-HHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHH
Confidence            3568999999999999999999987 4433 33333 22  1111111110 01111111000011 1111111111111


Q ss_pred             HHHHHHHHHHHHHHhhcchhHH-HHHHHHHHHHHHHHHHHHhcccc---c----HHHHHHHHHHHHHhheeecC
Q 017343          235 LAMFLFYSFVPILLKTNGATML-NLSLLTSDMWAVLIRIGAYHEKV---D----WLYFIAFAAVAVGLIIYSGG  300 (373)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~a~~~-~~~~~~~pv~~~l~~~~~~~e~~---~----~~~~~G~~li~~g~~l~~~~  300 (373)
                      +.....+.......++.+.... .+..-++-+.+.+++.+++||-.   +    ..-.+|.+++++|+++..+.
T Consensus        81 ~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~A  154 (345)
T PRK13499         81 ALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRA  154 (345)
T ss_pred             HHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence            1111222233333455555444 33445668899999999999764   2    33578999999999998873

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=95.86  E-value=0.035  Score=50.53  Aligned_cols=142  Identities=20%  Similarity=0.186  Sum_probs=98.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhc-c--CCCcHHHHHHHHHHHHHHHHHHHHH----hc----ccCccchH
Q 017343            7 FWTKKTLLGLGLGQFLSLLITSTGFSSSELARK-G--INAPTSQSFFNYVLLAIVYGSLMLY----RR----QPLKAKWY   75 (373)
Q Consensus         7 ~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~-~--~~~p~~~~~~r~~~~~~~l~~~~~~----~~----~~~~~~~~   75 (373)
                      ..-+|...|-+++++.+++.+.--+..|.-... |  .+-+.++.+.- ++..++++|.++.    ..    .+...+.-
T Consensus       240 ~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvG-LfnllllwP~l~iL~~~~~e~F~lP~~~q~~  318 (416)
T KOG2765|consen  240 LPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVG-LFNLLLLWPPLIILDFFGEERFELPSSTQFS  318 (416)
T ss_pred             CCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHH-HHHHHHHhHHHHHHHHhccCcccCCCCceeE
Confidence            344556667777777777776666665554332 2  22233333332 3444445443221    11    23334444


Q ss_pred             HHHHHHHHHHHH-HHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccC
Q 017343           76 YYLILGLIDVEG-NFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDV  149 (373)
Q Consensus        76 ~~~~~g~~~~~~-~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~  149 (373)
                      ..++.++++.+. .+++..|.-.+++-.+++-.+++.+..++.-.++.++++++..++|...+++|.+++...+.
T Consensus       319 ~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~  393 (416)
T KOG2765|consen  319 LVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE  393 (416)
T ss_pred             eeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence            566667777776 99999999999999999999999999999999999999999999999999999999987654

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=95.60  E-value=0.025  Score=49.23  Aligned_cols=135  Identities=12%  Similarity=0.112  Sum_probs=90.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc------c--c--CccchHHHHHHH
Q 017343           12 TLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR------Q--P--LKAKWYYYLILG   81 (373)
Q Consensus        12 ~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~------~--~--~~~~~~~~~~~g   81 (373)
                      .+.|.++|.+.++.-+......|.....-.+.-+.++++..+.+.++.+|++...+      .  .  ..+.|....+.|
T Consensus       183 s~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsg  262 (347)
T KOG1442|consen  183 SWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSG  262 (347)
T ss_pred             chhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHH
Confidence            46788899888888777777666433323345578899999999999999877655      1  1  122233344445


Q ss_pred             HHHHHHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeee
Q 017343           82 LIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIF  146 (373)
Q Consensus        82 ~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~  146 (373)
                      ++|+..++...+=++-+++-...+-.......-.+++..+++|..+...|.+.++.+.|-..-+.
T Consensus       263 lfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~  327 (347)
T KOG1442|consen  263 LFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTL  327 (347)
T ss_pred             HHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHH
Confidence            66655554444455556655554444445555668999999999999999998887777665543

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=95.40  E-value=1  Score=41.01  Aligned_cols=136  Identities=13%  Similarity=0.069  Sum_probs=88.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhcc----CChhHHHHHHHHHHHHHHHHHHHHhhc---c-cccccc---cccc-chhHHH
Q 017343          164 DALVIAGATLYAVSNVSEEFLVKK----ADRIELMAFLGLFGGIISAVQISILER---K-ELQSIH---WSAG-AALPFF  231 (373)
Q Consensus       164 ~~l~l~a~~~~a~~~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~---~~~~-~~~~~~  231 (373)
                      .+..+...+.++......|...++    ..|.+.....-+.-.++.....+.-+.   . .....+   +..+ ...-+.
T Consensus        17 ~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~   96 (345)
T KOG2234|consen   17 YLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVS   96 (345)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHH
Confidence            344455555566666666654432    236667777767766666444333221   1 011111   1111 111222


Q ss_pred             HHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeec
Q 017343          232 GYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSG  299 (373)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  299 (373)
                      ...+.+..-|...+..+.+.++.+.++...++...+.++..++++++++..||...++...|+.+.+.
T Consensus        97 vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~  164 (345)
T KOG2234|consen   97 VPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQL  164 (345)
T ss_pred             HHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhc
Confidence            23344556666667778999999999999999999999999999999999999999999999999884

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=94.20  E-value=0.69  Score=34.06  Aligned_cols=112  Identities=13%  Similarity=-0.005  Sum_probs=75.9

Q ss_pred             HHHHHHHHHHHHHhhHHHHhc----cCCCcHHHHHHHHHHHHHHHHHHHHHhcccCccchHHHHHHHHHHHHHHHHHHHH
Q 017343           19 GQFLSLLITSTGFSSSELARK----GINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKA   94 (373)
Q Consensus        19 ~~~~~l~~~~~~~~~~~l~~~----~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a   94 (373)
                      .+.+.++|+..+.+.+.-+..    +..+...+.+.|-.....               -.|.+.+.-+++..+..+||.-
T Consensus         8 lvaVgllWG~Tnplirrgs~g~~~v~~~~~k~~~~lqe~~tl~---------------l~w~Y~iPFllNqcgSaly~~t   72 (125)
T KOG4831|consen    8 LVAVGLLWGATNPLIRRGSLGWDKVKSSSRKIMIALQEMKTLF---------------LNWEYLIPFLLNQCGSALYYLT   72 (125)
T ss_pred             HHHHHHHHccccHHHHHHHhhHhhccCchHHHHHHHHHHHHHH---------------HhHHHHHHHHHHHhhHHHHHHH
Confidence            356778999999998876543    222233344444322211               1234555667788889999999


Q ss_pred             HhccchhHHHHhhcc-hhhHHHHHHHHHhccccceeeeehhhhheecceeee
Q 017343           95 YQYTSLTSVMLLDCW-TIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVI  145 (373)
Q Consensus        95 l~~~~~~~~~~i~~~-~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~  145 (373)
                      ++..+.+.+..+.+. +-.|+.+.+..+-.|...++.++|..+.++|+.+..
T Consensus        73 La~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci  124 (125)
T KOG4831|consen   73 LASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI  124 (125)
T ss_pred             HhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence            999999988876554 556677777766556667778899999999987654

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=94.07  E-value=0.033  Score=47.74  Aligned_cols=135  Identities=10%  Similarity=-0.013  Sum_probs=76.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHH
Q 017343          163 GDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYS  242 (373)
Q Consensus       163 G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (373)
                      ..+++++=++.|+..-....|..  .+|.+.+.-..+-+.++..+..++..+.    .++.......+-|  +-.-..+.
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~G--G~p~qQ~lGtT~GALifaiiv~~~~~p~----~T~~~~iv~~isG--~~Ws~GQ~   74 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKFG--GKPYQQTLGTTLGALIFAIIVFLFVSPE----LTLTIFIVGFISG--AFWSFGQA   74 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeecC--CChhHhhhhccHHHHHHHHHHheeecCc----cchhhHHHHHHhh--hHhhhhhh
Confidence            56788888999998877766543  3455555444444444443333332211    1221111111111  11111222


Q ss_pred             HHHHHHhhcchhHHH-HHHHHHHHHHHHHHHHHhcccccHHHH----HHHHHHHHHhheeecCCCCCC
Q 017343          243 FVPILLKTNGATMLN-LSLLTSDMWAVLIRIGAYHEKVDWLYF----IAFAAVAVGLIIYSGGDKDDD  305 (373)
Q Consensus       243 ~~~~~~~~~~a~~~~-~~~~~~pv~~~l~~~~~~~e~~~~~~~----~G~~li~~g~~l~~~~~~~~~  305 (373)
                      ......+..+...+. +..-.+.+-+-+++++.|||..+..++    +..++++.|+++..++++.++
T Consensus        75 ~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk  142 (288)
T COG4975          75 NQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNK  142 (288)
T ss_pred             hhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccc
Confidence            233344555554443 234456888999999999999988764    356788899999887665433

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=93.52  E-value=0.38  Score=38.41  Aligned_cols=130  Identities=15%  Similarity=0.193  Sum_probs=76.4

Q ss_pred             HHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc-cc----CccchHHHHHHHHHHHHHHH
Q 017343           15 GLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR-QP----LKAKWYYYLILGLIDVEGNF   89 (373)
Q Consensus        15 ~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~-~~----~~~~~~~~~~~g~~~~~~~~   89 (373)
                      .+++++..-.+......++.-+.+ ...+|..-.+..+....+++..+.+.+. ++    .++..|+.+.-|+++.....
T Consensus         6 ~ll~~i~aG~~l~~Q~~iN~qL~~-~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lGa~~vt   84 (150)
T COG3238           6 YLLFAILAGALLPLQAAINGRLAR-YLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLGAIFVT   84 (150)
T ss_pred             HHHHHHHHhhhhhhHHHHHHHHHH-HcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchhhhhhh
Confidence            344555555666666777777765 3447899999999998888777655543 11    12223333444566555433


Q ss_pred             HHHHHHhccchhHHH-HhhcchhhHHHHHHHHHh----ccccceeeeehhhhheecceeee
Q 017343           90 LVVKAYQYTSLTSVM-LLDCWTIPCVMFLTWIFL----KTKYRYKKITGVVVCVAGLVTVI  145 (373)
Q Consensus        90 ~~~~al~~~~~~~~~-~i~~~~p~~~~ll~~~~l----~e~~~~~~~~~~~l~~~Gv~l~~  145 (373)
                      ..........++... ++.....+..+++-.+=.    +++++..+++|+++.++|+.++.
T Consensus        85 ~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~  145 (150)
T COG3238          85 SSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR  145 (150)
T ss_pred             hhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence            334444444444443 334444444445443322    36778889999999999955443

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=92.55  E-value=0.43  Score=42.78  Aligned_cols=105  Identities=11%  Similarity=0.102  Sum_probs=75.6

Q ss_pred             CcHHHHHHHHHHHHHHHHHHHHHhcc-----------cCccchHHHHHHHHHHHHHHHHHHHHHhccchhHHHHhhcchh
Q 017343           43 APTSQSFFNYVLLAIVYGSLMLYRRQ-----------PLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTI  111 (373)
Q Consensus        43 ~p~~~~~~r~~~~~~~l~~~~~~~~~-----------~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~p  111 (373)
                      .-+.+.++..+++...+..+......           .....+-.+.+.++++++.+++.++..+..|+...++.....-
T Consensus       186 ~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s~~ct~~~SAtT~tivG~~n~  265 (314)
T KOG1444|consen  186 NKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGFGISYTSFLCTRVNSATTTTIVGAKNK  265 (314)
T ss_pred             cceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccccceeehhhhhh
Confidence            44566777777777666555433221           1122234556667888888999999999999999999996666


Q ss_pred             hHHHHHHHHHhccccceeeeehhhhheecceeeeec
Q 017343          112 PCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFS  147 (373)
Q Consensus       112 ~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~  147 (373)
                      ..+.+...++.+++.++...+|+.++++|-++-...
T Consensus       266 l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~  301 (314)
T KOG1444|consen  266 LLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYA  301 (314)
T ss_pred             HHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhh
Confidence            666677777777888999999999998888776553

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=91.88  E-value=0.31  Score=42.55  Aligned_cols=124  Identities=10%  Similarity=0.153  Sum_probs=84.7

Q ss_pred             HHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc----------ccCccchHHHHHHHHHHHHHHHHHHHHH
Q 017343           26 ITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR----------QPLKAKWYYYLILGLIDVEGNFLVVKAY   95 (373)
Q Consensus        26 ~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~----------~~~~~~~~~~~~~g~~~~~~~~~~~~al   95 (373)
                      -+..+=+.....+....+...++++.+.+..++++..+....          ..+.+.....++.+..+..+......=+
T Consensus       202 DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~~gylG~~~VLalI  281 (367)
T KOG1582|consen  202 DAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSLAGYLGIVFVLALI  281 (367)
T ss_pred             HHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHHHhHhhHHHHHHHH
Confidence            333344444444333334467777777777777766554433          3344445566666777777654444444


Q ss_pred             hccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccC
Q 017343           96 QYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDV  149 (373)
Q Consensus        96 ~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~  149 (373)
                      +.-.+..+..+...--..+.+++.+++.++++.....+.++.+.|+.+-..+..
T Consensus       282 ~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~  335 (367)
T KOG1582|consen  282 KLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKR  335 (367)
T ss_pred             HHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCC
Confidence            555667777777778888999999999999999999999999999999888663

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=91.53  E-value=0.15  Score=45.59  Aligned_cols=121  Identities=12%  Similarity=-0.039  Sum_probs=80.3

Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHHH
Q 017343          157 GSSPRKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALA  236 (373)
Q Consensus       157 ~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (373)
                      ..+...|.++++.+.++-+...++.|+..++.....                  .-.+.+..+.-..+.+|...+..+++
T Consensus        16 ~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~~~------------------~ra~~gg~~yl~~~~Ww~G~ltm~vG   77 (335)
T KOG2922|consen   16 SSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGASG------------------LRAGEGGYGYLKEPLWWAGMLTMIVG   77 (335)
T ss_pred             ccCceeeeeehhhccEEEeeehhhhHHHHHHHhhhc------------------ccccCCCcchhhhHHHHHHHHHHHHH
Confidence            445678999999999999999999988765532200                  00000000111112222323332333


Q ss_pred             HHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeec
Q 017343          237 MFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSG  299 (373)
Q Consensus       237 ~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  299 (373)
                      -..    -+......++..++..+.++.+...+++..+++|++++...+|+++.++|..+...
T Consensus        78 ei~----NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~  136 (335)
T KOG2922|consen   78 EIA----NFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVI  136 (335)
T ss_pred             hHh----hHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEE
Confidence            222    22223778888899999999999999999999999999999999999999876654

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=91.18  E-value=0.63  Score=40.92  Aligned_cols=126  Identities=13%  Similarity=0.005  Sum_probs=77.0

Q ss_pred             HHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhcccCccchHHHHHHHHHHHHHHHHHHHHH
Q 017343           16 LGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAY   95 (373)
Q Consensus        16 ~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al   95 (373)
                      ++..++..++.++.++-.|....   .+++.+-++......+.-+.....+.  ....+...++-|.+...+|.+..-.+
T Consensus         2 ~~a~~va~~~fGs~~vPvK~~~~---gDg~~fQw~~~~~i~~~g~~v~~~~~--~p~f~p~amlgG~lW~~gN~~~vpii   76 (254)
T PF07857_consen    2 YIACIVAVLFFGSNFVPVKKFDT---GDGFFFQWVMCSGIFLVGLVVNLILG--FPPFYPWAMLGGALWATGNILVVPII   76 (254)
T ss_pred             chhHHHHHHHhcccceeeEeccC---CCcHHHHHHHHHHHHHHHHHHHHhcC--CCcceeHHHhhhhhhhcCceeehhHh
Confidence            34455566677777776665432   24555555443333332222222222  22233334555688888899999999


Q ss_pred             hccchhHHHHhhcchhhHHH-HHHHH-Hhcccc-----ceeeeehhhhheecceeeee
Q 017343           96 QYTSLTSVMLLDCWTIPCVM-FLTWI-FLKTKY-----RYKKITGVVVCVAGLVTVIF  146 (373)
Q Consensus        96 ~~~~~~~~~~i~~~~p~~~~-ll~~~-~l~e~~-----~~~~~~~~~l~~~Gv~l~~~  146 (373)
                      +.+..+....+.++.-..+- ..+++ +++++.     ....++|++++++|..+...
T Consensus        77 ~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~f  134 (254)
T PF07857_consen   77 KTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSF  134 (254)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheee
Confidence            99999999999988666666 44443 344332     23467888888888887765

The region concerned is approximately 280 residues long.

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=90.32  E-value=0.65  Score=38.58  Aligned_cols=59  Identities=12%  Similarity=0.145  Sum_probs=51.6

Q ss_pred             HHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCCCC
Q 017343          245 PILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDKD  303 (373)
Q Consensus       245 ~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~  303 (373)
                      ...++..+++.++....-+..+..+++|+++++++....++.+++.+.|+++..+.+..
T Consensus        71 l~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~  129 (290)
T KOG4314|consen   71 LLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNE  129 (290)
T ss_pred             HHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccch
Confidence            34458888888888888889999999999999999999999999999999999876543

>PRK02237 hypothetical protein; Provisional

Probab=90.05  E-value=3  Score=31.07  Aligned_cols=41  Identities=15%  Similarity=0.007  Sum_probs=35.4

Q ss_pred             HHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCCC
Q 017343          262 TSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDK  302 (373)
Q Consensus       262 ~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  302 (373)
                      .-.+.++++++.+-|++|+...++|.++.++|+.+..+.++
T Consensus        68 vyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~pR  108 (109)
T PRK02237         68 VYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAPR  108 (109)
T ss_pred             HHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecCC
Confidence            33888899999999999999999999999999977765443

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=89.35  E-value=1.6  Score=39.07  Aligned_cols=133  Identities=19%  Similarity=0.155  Sum_probs=81.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhHHHHhc---cCCCcHHHHHHHHHHHHHHHHHHHHH-hc-----------cc-CccchH
Q 017343           12 TLLGLGLGQFLSLLITSTGFSSSELARK---GINAPTSQSFFNYVLLAIVYGSLMLY-RR-----------QP-LKAKWY   75 (373)
Q Consensus        12 ~~~~~~l~~~~~l~~~~~~~~~~~l~~~---~~~~p~~~~~~r~~~~~~~l~~~~~~-~~-----------~~-~~~~~~   75 (373)
                      ...|.++....+++.+.=|.+.+.+.++   +-.+|+...+--.-...+.+++..+. -+           .. ....++
T Consensus       162 ~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~r  241 (349)
T KOG1443|consen  162 NIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILR  241 (349)
T ss_pred             eehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHH
Confidence            3557778888888889999999888765   33455544433333333334443222 11           01 111222


Q ss_pred             HHHHHHHHHHHH---HHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceee
Q 017343           76 YYLILGLIDVEG---NFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTV  144 (373)
Q Consensus        76 ~~~~~g~~~~~~---~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~  144 (373)
                      ....+++.+...   ...-+.=+..++.-..++..-..-+.+.+++..+++++++...|.|..++..|+..=
T Consensus       242 v~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~  313 (349)
T KOG1443|consen  242 VIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH  313 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence            222223333222   333344445566555555555667888899999999999999999999999999876

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=89.23  E-value=2.7  Score=31.26  Aligned_cols=41  Identities=17%  Similarity=-0.001  Sum_probs=36.2

Q ss_pred             HHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCCC
Q 017343          262 TSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDK  302 (373)
Q Consensus       262 ~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  302 (373)
                      .-.+.++++++.+-+++|+...++|..+.++|+.+..+.++
T Consensus        66 vfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR  106 (107)
T PF02694_consen   66 VFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR  106 (107)
T ss_pred             hHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence            33888999999999999999999999999999988776553

; GO: 0016020 membrane

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=87.63  E-value=6.9  Score=34.69  Aligned_cols=56  Identities=13%  Similarity=0.103  Sum_probs=48.4

Q ss_pred             HHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecC
Q 017343          245 PILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGG  300 (373)
Q Consensus       245 ~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~  300 (373)
                      ...+..+++....+..-...+++.+++.-+++.+++..+|+|+..+.+|++.+-..
T Consensus       104 ~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~  159 (372)
T KOG3912|consen  104 YVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL  159 (372)
T ss_pred             HHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence            33347788888888877779999999999999999999999999999999988754

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=85.17  E-value=13  Score=34.06  Aligned_cols=136  Identities=15%  Similarity=0.086  Sum_probs=68.6

Q ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHhccCChhH-HHHHHHHHHHHHHHHHH-HHhhcccccc----ccccccchhHHHH
Q 017343          159 SPRKGDALVIAGATLYAVSNVSEEFLVKKADRIE-LMAFLGLFGGIISAVQI-SILERKELQS----IHWSAGAALPFFG  232 (373)
Q Consensus       159 ~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~  232 (373)
                      +...|+++..+++++.+.+.+-.||.. +-+ ++ .=..+.+++-++. |.. ....-+++..    .+.+......+.|
T Consensus         4 ~ii~Gii~h~iGg~~~~sfy~P~kkvk-~Ws-WEs~Wlv~gi~swli~-P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G   80 (344)
T PF06379_consen    4 AIILGIIFHAIGGFASGSFYVPFKKVK-GWS-WESYWLVQGIFSWLIV-PWLWALLAIPDFFSIYSATPASTLFWTFLFG   80 (344)
T ss_pred             hHHHHHHHHHHHHHHhhhhccchhhcC-Ccc-HHHHHHHHHHHHHHHH-HHHHHHHhCCcHHHHHHhCChhHHHHHHHHH
Confidence            346899999999999999999888753 222 22 2222334444433 322 2222222211    1111111222222


Q ss_pred             H--HHHHHHHHHHHHHHHhhcchhHH-HHHHHHHHHHHHHHHHHHhc-------ccccHHHHHHHHHHHHHhheeecCC
Q 017343          233 Y--ALAMFLFYSFVPILLKTNGATML-NLSLLTSDMWAVLIRIGAYH-------EKVDWLYFIAFAAVAVGLIIYSGGD  301 (373)
Q Consensus       233 ~--~~~~~~~~~~~~~~~~~~~a~~~-~~~~~~~pv~~~l~~~~~~~-------e~~~~~~~~G~~li~~g~~l~~~~~  301 (373)
                      .  +++...|-..+    |+.+.... ++..-+..+++.++--++.|       ++-....++|.++.++|+.+..+.-
T Consensus        81 ~lWGIGgltfGl~m----ryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG  155 (344)
T PF06379_consen   81 VLWGIGGLTFGLAM----RYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAG  155 (344)
T ss_pred             HHHhcchhhHhHHH----HHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHH
Confidence            1  23333333333    44443332 22222334555555444433       2223467889999999999987644

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function

Probab=82.59  E-value=2.6  Score=31.23  Aligned_cols=32  Identities=16%  Similarity=0.226  Sum_probs=27.1

Q ss_pred             HHHHHHHHhcccccHHHHHHHHHHHHHhheee
Q 017343          267 AVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYS  298 (373)
Q Consensus       267 ~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~  298 (373)
                      -..++.++++|++++....|.++++.+++...
T Consensus        76 F~~Fsv~~l~E~l~~n~l~af~~i~~av~fiF  107 (108)
T PF04342_consen   76 FAPFSVFYLGEPLKWNYLWAFLCILGAVYFIF  107 (108)
T ss_pred             eHHHHHHHhCCCccHHHHHHHHHHHHhhheee
Confidence            34677889999999999999999999987653

>COG1742 Uncharacterized conserved protein [Function unknown]

Probab=82.37  E-value=3.1  Score=30.67  Aligned_cols=39  Identities=18%  Similarity=0.453  Sum_probs=32.1

Q ss_pred             hhhHHHHHHHHHhccccceeeeehhhhheecceeeeecc
Q 017343          110 TIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSD  148 (373)
Q Consensus       110 ~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~  148 (373)
                      ......+..++.-+.|+++..|+|..+|++|+.++....
T Consensus        68 yI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~p  106 (109)
T COG1742          68 YIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGP  106 (109)
T ss_pred             HHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCC
Confidence            444555677778899999999999999999999988743

>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4)

Probab=81.41  E-value=0.47  Score=41.56  Aligned_cols=76  Identities=8%  Similarity=0.155  Sum_probs=0.0

Q ss_pred             HHHHhccchhHHHHhhcchhhHHH-HHHHHHhcccc-ceeeeehhhhheecceeeeeccCccCCCCCCCCCchhhHHHHH
Q 017343           92 VKAYQYTSLTSVMLLDCWTIPCVM-FLTWIFLKTKY-RYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIA  169 (373)
Q Consensus        92 ~~al~~~~~~~~~~i~~~~p~~~~-ll~~~~l~e~~-~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~l~l~  169 (373)
                      |+-+.-.+-+..+++.+...+.++ ++-.+++|+|+ -+.-.++++++.+-+.+...-..      .++...+|+++.++
T Consensus        41 ~iimsd~t~~a~~vl~sfAvvliiIIiIImlF~RrLLCPLGlLCiilimi~lLv~~L~tL------tGQ~LF~Gi~~l~l  114 (381)
T PF05297_consen   41 FIIMSDLTQGALTVLYSFAVVLIIIIIIIMLFKRRLLCPLGLLCIILIMIVLLVSMLWTL------TGQTLFVGIVILFL  114 (381)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHHHh------hccHHHHHHHHHHH
Confidence            344444555555666666666555 44444556554 34455555554444333332111      13344577766655


Q ss_pred             HHHH
Q 017343          170 GATL  173 (373)
Q Consensus       170 a~~~  173 (373)
                      +++.
T Consensus       115 ~~lL  118 (381)
T PF05297_consen  115 CCLL  118 (381)
T ss_dssp             ----
T ss_pred             HHHH
Confidence            5443

LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=81.23  E-value=2.4  Score=37.43  Aligned_cols=134  Identities=16%  Similarity=0.168  Sum_probs=79.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHH---HHhc---------------ccC
Q 017343            9 TKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLM---LYRR---------------QPL   70 (373)
Q Consensus         9 ~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~---~~~~---------------~~~   70 (373)
                      ..+...|+.+..+..+..+.++.......++..-++-+..++..++....++...   ....               ...
T Consensus       159 ~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~v  238 (330)
T KOG1583|consen  159 FFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKV  238 (330)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccc
Confidence            3455678887777778888888888888877555667777776666554433221   1100               011


Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHhc----cchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeee
Q 017343           71 KAKWYYYLILGLIDVEGNFLVVKAYQY----TSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIF  146 (373)
Q Consensus        71 ~~~~~~~~~~g~~~~~~~~~~~~al~~----~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~  146 (373)
                      +..|+.++    .++..+++...+..-    ++.-++++...+--.+..+++.+.++..+++.+|+|..+.+.|..+...
T Consensus       239 P~~~~yLl----~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~  314 (330)
T KOG1583|consen  239 PSMWVYLL----FNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFAN  314 (330)
T ss_pred             cHHHHHHH----HHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence            22222222    222222222222221    3333445555666677778888888889999999999988888887664

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=80.66  E-value=1.9  Score=36.66  Aligned_cols=96  Identities=14%  Similarity=0.122  Sum_probs=66.3

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHhc-c--------cCccchHHHHHHHHHHHHHHHHHHHHHhccchhHHHHhhcchhhHH
Q 017343           44 PTSQSFFNYVLLAIVYGSLMLYRR-Q--------PLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCV  114 (373)
Q Consensus        44 p~~~~~~r~~~~~~~l~~~~~~~~-~--------~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~  114 (373)
                      -+.-.++..+++..+++.+-.... +        .+.......++.|++.++..++.-+.++-++.+..+++..+.-...
T Consensus       185 d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~  264 (309)
T COG5070         185 DFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPI  264 (309)
T ss_pred             hhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChH
Confidence            355667777777777666533322 1        1111123455667776666888888888899999999999888888


Q ss_pred             HHHHHHHhccccceeeeehhhhhee
Q 017343          115 MFLTWIFLKTKYRYKKITGVVVCVA  139 (373)
Q Consensus       115 ~ll~~~~l~e~~~~~~~~~~~l~~~  139 (373)
                      .+.+.++++|+.++..+.+++++++
T Consensus       265 alaGlvffdap~nf~si~sillGfl  289 (309)
T COG5070         265 ALAGLVFFDAPVNFLSIFSILLGFL  289 (309)
T ss_pred             HHhhhhhcCCchhHHHHHHHHHHHH
Confidence            8888888888877777666665544

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	373
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.73
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.42
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.3
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.19

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.73  E-value=2.5e-08  Score=77.81  Aligned_cols=68  Identities=13%  Similarity=0.168  Sum_probs=44.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcchhHHHHH-HHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCC
Q 017343          230 FFGYALAMFLFYSFVPILLKTNGATMLNLS-LLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGD  301 (373)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~-~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  301 (373)
                      +++.+++++++    ..++++.+...+..+ ..+.|+++.++++++|||++++.+++|+++|++|+++.+..+
T Consensus        37 i~~~~ls~~l~----~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           37 IICYCASFWLL----AQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHH----HHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHH----HHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            34444444444    455588999988877 789999999999999999999999999999999999987543

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.42  E-value=6.4e-06  Score=61.81  Aligned_cols=60  Identities=12%  Similarity=0.086  Sum_probs=51.7

Q ss_pred             HHHHHHHhhcchhHHHHH-HHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCC
Q 017343          242 SFVPILLKTNGATMLNLS-LLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGD  301 (373)
Q Consensus       242 ~~~~~~~~~~~a~~~~~~-~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  301 (373)
                      .+....+++.+...+... ..+.|+++.+++++++||+++..+++|.++|+.|+++.+..+
T Consensus        45 ~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           45 WLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            334445688998888777 788999999999999999999999999999999999987643

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.30  E-value=1.7e-06  Score=65.05  Aligned_cols=69  Identities=16%  Similarity=0.296  Sum_probs=60.1

Q ss_pred             HHHHHH-HHHHHHHHHHhccchhHHHHh-hcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeecc
Q 017343           80 LGLIDV-EGNFLVVKAYQYTSLTSVMLL-DCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSD  148 (373)
Q Consensus        80 ~g~~~~-~~~~~~~~al~~~~~~~~~~i-~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~  148 (373)
                      .+++.. ...+++..++++.|.+.+..+ ..+.|+++++++++++||++++.+++|+.++++|++++...+
T Consensus        35 ~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            444443 447778899999999999998 799999999999999999999999999999999999987643

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.19  E-value=8.4e-07  Score=69.10  Aligned_cols=69  Identities=16%  Similarity=0.282  Sum_probs=49.3

Q ss_pred             HHHHHHHH-HHHHHHHHhccchhHHHHh-hcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeecc
Q 017343           80 LGLIDVEG-NFLVVKAYQYTSLTSVMLL-DCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSD  148 (373)
Q Consensus        80 ~g~~~~~~-~~~~~~al~~~~~~~~~~i-~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~  148 (373)
                      .+++.... .++++.++++.+++.+..+ .++.|++++++++++++|++++.+++|++++++|++++...+
T Consensus        35 l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            44444444 7888899999999999998 899999999999999999999999999999999999987643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00