Citrus Sinensis ID: 017370

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370--
Protein Sequence
MEIPLASLTSSRATTTTSLKLNGGLGRELCVSKKGTVKSGPNQMRWCVRASAERSRSNEDIKNSDNSRFTGSVMEVTTFDRGFGQPAASDFPVWDKIGAIVRLSYGIGIYGAMALAGRFICSITGVDSMGGFHPSLDAIVEGLGYAAPPIMALLFILDDEVVKLSPHARAIRDVEDEELRSFFYGMSPWQFVLIVAASSVGEELFYRAAVQGALADIFLRGTDFLTDAQGMASLTGVLPPFVPFAQAFAAVITAALTGSLYYVATSPKDPTYVVAPVLRSRSGREDLKKLFAAWYERRQMKKIYSPLLEGLLALYLGFEWIQTNNILAPIITHGIYSAVILGHGLWKIHDHRRRLHQRIQRLELEGNDSDRK
Secondary Structure (PSIPRED)
ccccccccccccccccccEEcccccccEEEEEccccccccccccHHHHHHHHcccccccccccccccccccccEEEEEEcccccccccccccHHHHHccEEEEEEEHHHHHHHHHHccEEEEEEcccccccccccHHHHHHccccccHHHHHHHHHccccHHcccccccccccccHHHHHHHHHccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHccccccccHHHHHHHHHHHHHHHcEEEEEEcccccccEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEcccHHHHHHHHHHHHHHccccccHHcHHHHHHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
ccccEEEccccccccccccccccccccccEEEccccccccccccEEEEEEcHHccccccccccccccccccccEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEccccccccccccHHHHHHHHcccccHHHHHHHHHccHHEEccccHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHccHHHEEcccccccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHcccccHHHHHcHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccccc
Coil and Loop (DISEMBL)
meiplasltssrattttslklngglgrelcvskkgtvksgpnqmrWCVRAsaersrsnediknsdnsrftgsvMEVTtfdrgfgqpaasdfpvwdKIGAIVRLSYGIGIYGAMALAGRFICSitgvdsmggfhpSLDAIVEglgyaappIMALLFILDdevvklspharairDVEDEELRSFFYGMSPWQFVLIVAASSVGEELFYRAAVQGALADIFLRGtdfltdaqgmasltgvlppfvpFAQAFAAVITAALTGSLyyvatspkdptyvvapvlrsrsgreDLKKLFAAWYERRQMKKIYSPLLEGLLALYLGFewiqtnnilapiitHGIYSAVILGHGLWKIHDHRRRLHQRIQRLElegndsdrk
Flexible Loop (DISEMBL)
meiplasltssrattttslklngglgrelcvskkgtvksgpnqmrWCVRasaersrsnediknsdnsrftgsVMEVTTFDRGFGQPAASDFPVWDKIGAIVRLSYGIGIYGAMALAGRFICSITGVDSMGGFHPSLDAIVEGLGYAAPPIMALLFILDDEVVKLSPHARAIRDVEDEELRSFFYGMSPWQFVLIVAASSVGEELFYRAAVQGALADIFLRGTDFLTDAQGMASLTGVLPPFVPFAQAFAAVITAALTGSLYYvatspkdptyvvapvlrsrsgredlKKLFAAWYERRQMKKIYSPLLEGLLALYLGFEWIQTNNILAPIITHGIYSAVILGHGLWKIHDHRRRLHQRIqrlelegndsdrk
Low Complexity Region (SEG)
MEIPlasltssrattttslklNGGLGRELCVSKKGTVKSGPNQMRWCVRASAERSRSNEDIKNSDNSRFTGSVMEVTTFDRGFGQPAASDFPVWDKIGAIVRLSYGIGIYGAMALAGRFICSITGVDSMGGFHPSLDAIVEGLGYAAPPIMALLFILDDEVVKLSPHARAIRDVEDEELRSFFYGMSPWQFVLIVAASSVGEELFYRAAVQGALADIFLRGTDFLTDAQGMASLTGvlppfvpfaqafaavitaaLTGSLYYVATSPKDPTYVVAPVLRSRSGREDLKKLFAAWYERRQMKKIYSPllegllalylGFEWIQTNNILAPIITHGIYSAVILGHGLWKihdhrrrlhqriqrleleGNDSDRK
Disordered region (IsUnstruct)
***************************ELCV**************WC*************************VMEVTTFDRGFGQPAASDFPVWDKIGAIVRLSYGIGIYGAMALAGRFICSITGVDSMGGFHPSLDAIVEGLGYAAPPIMALLFILDDEVVKLSPHARAIRDVEDEELRSFFYGMSPWQFVLIVAASSVGEELFYRAAVQGALADIFLRGTDFLTDAQGMASLTGVLPPFVPFAQAFAAVITAALTGSLYYVATSPKDPTYVVAPVLRSRSGREDLKKLFAAWYERRQMKKIYSPLLEGLLALYLGFEWIQTNNILAPIITHGIYSAVILGHGLWKIHDHRRRLHQ***************
Disordered Region (DISOPRED)
*EIPL**LTSSR****************LCVS*KG*************************************VMEVTTFDRGFGQPAASDFPVWDKIGAIVRLSYGIGIYGAMALAGRFICSITGVDSMGGFHPSLDAIVEGLGYAAPPIMALLFILDDEVVKLSPHARAIRDVEDEELRSFFYGMSPWQFVLIVAASSVGEELFYRAAVQGALADIFLRGTDFLTDAQGMASLTGVLPPFVPFAQAFAAVITAALTGSLYYVATSPKDPTYVVAPVL**********KLFAAWYERRQMKKIYSPLLEGLLALYLGFEWIQTNNILAPIITHGIYSAVILGHGLWKIHDHRRR******************
Disordered Region (DISEMBL)
*************TTTTSLKLNGGLGRELCVSKKGTVKSGPNQMRWCVR************KNSDNSRFTGSVMEVTTFDRGFGQPAASDFPVWDKIGAIVRLSYGIGIYGAMALAGRFICSITGVDSMGGFHPSLDAIVEGLGYAAPPIMALLFILDDEVVKLSPHARAIRDVEDEELRSFFYGMSPWQFVLIVAASSVGEELFYRAAVQGALADIFLRGTDFLTDAQGMASLTGVLPPFVPFAQAFAAVITAALTGSLYYVATSPKDPTYVVAPVLRSRSGREDLKKLFAAWYERRQMKKIYSPLLEGLLALYLGFEWIQTNNILAPIITHGIYSAVILGHGLWKIHDHRRRLHQRIQRLEL********
Disordered Region (DISPRO)
***************************ELCVSKKGTVKSGPNQMRWCVRASAER***********NSRFTGSVMEVTTFDRGFGQPAASDFPVWDKIGAIVRLSYGIGIYGAMALAGRFICSITGVDSMGGFHPSLDAIVEGLGYAAPPIMALLFILDDEVVKLSPHARAIRDVEDEELRSFFYGMSPWQFVLIVAASSVGEELFYRAAVQGALADIFLRGTDFLTDAQGMASLTGVLPPFVPFAQAFAAVITAALTGSLYYVATSPKDPTYVVAPVLRSRSGREDLKKLFAAWYERRQMKKIYSPLLEGLLALYLGFEWIQTNNILAPIITHGIYSAVILGHGLWKIHDHRRRLHQRIQRLEL********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEIPLASLTSSRATTTTSLKLNGGLGRELCVSKKGTVKSGPNQMRWCVRASAERSRSNEDIKNSDNSRFTGSVMEVTTFDRGFGQPAASDFPVWDKIGAIVRLSYGIGIYGAMALAGRFICSITGVDSMGGFHPSLDAIVEGLGYAAPPIMALLFILDDEVVKLSPHARAIRDVEDEELRSFFYGMSPWQFVLIVAASSVGEELFYRAAVQGALADIFLRGTDFLTDAQGMASLTGVLPPFVPFAQAFAAVITAALTGSLYYVATSPKDPTYVVAPVLRSRSGREDLKKLFAAWYERRQMKKIYSPLLEGLLALYLGFEWIQTNNILAPIITHGIYSAVILGHGLWKIHDHRRRLHQRIQRLELEGNDSDRK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	372
224138100	382	predicted protein [Populus trichocarpa]	0.881	0.858	0.827	1e-145
225427218	367	PREDICTED: uncharacterized protein LOC10	0.919	0.931	0.778	1e-145
147779897	367	hypothetical protein VITISV_016425 [Viti	0.919	0.931	0.778	1e-145
356497037	372	PREDICTED: uncharacterized protein LOC10	0.852	0.852	0.808	1e-139
358248464	404	uncharacterized protein LOC100818224 [Gl	0.852	0.784	0.796	1e-137
219363603	375	uncharacterized protein LOC100217228 [Ze	0.755	0.749	0.811	1e-137
125542022	380	hypothetical protein OsI_09601 [Oryza sa	0.758	0.742	0.795	1e-134
297823321	371	predicted protein [Arabidopsis lyrata su	0.806	0.808	0.793	1e-134
357114532	366	PREDICTED: uncharacterized protein LOC10	0.760	0.773	0.787	1e-134
357482397	371	hypothetical protein MTR_5g014430 [Medic	0.814	0.816	0.807	1e-133

>gi|224138100|ref|XP_002326518.1| predicted protein [Populus trichocarpa] gi|222833840|gb|EEE72317.1| predicted protein [Populus trichocarpa]

 Score =  521 bits (1343), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 274/331 (82%), Positives = 304/331 (91%), Gaps = 3/331 (0%)

Query: 43  QMRWCVRASAERSRS-NEDIKNSDNSRFTGSVMEVTTFDRGFGQPAASDFPVWDKIGAIV 101
           Q+R C +AS ER+ + +E I+  +  RFTGS MEVTTFD+ FG  AASDFP+W+KIGA+V
Sbjct: 54  QIR-CSKASTERTGAGSEGIEERERRRFTGSAMEVTTFDQSFGD-AASDFPLWEKIGAVV 111

Query: 102 RLSYGIGIYGAMALAGRFICSITGVDSMGGFHPSLDAIVEGLGYAAPPIMALLFILDDEV 161
           RL YGIGIYG MALAGRFICSITG+DS+GGF+PSLDA +EGLGYAAPP+MALLFILDDEV
Sbjct: 112 RLCYGIGIYGGMALAGRFICSITGIDSLGGFNPSLDAFLEGLGYAAPPVMALLFILDDEV 171

Query: 162 VKLSPHARAIRDVEDEELRSFFYGMSPWQFVLIVAASSVGEELFYRAAVQGALADIFLRG 221
           VKLSPHARAIRDVEDEELR+FFYGMSPWQF+LIVAASSVGEELFYRAAVQGALADIFLRG
Sbjct: 172 VKLSPHARAIRDVEDEELRNFFYGMSPWQFILIVAASSVGEELFYRAAVQGALADIFLRG 231

Query: 222 TDFLTDAQGMASLTGVLPPFVPFAQAFAAVITAALTGSLYYVATSPKDPTYVVAPVLRSR 281
           T+ + DA+GMASLTGVLPPFVPFAQAFAAV+TA LTGSLYYVATSPKDPTYVVAPVL S 
Sbjct: 232 TNLMEDARGMASLTGVLPPFVPFAQAFAAVLTAVLTGSLYYVATSPKDPTYVVAPVLPSY 291

Query: 282 SGREDLKKLFAAWYERRQMKKIYSPLLEGLLALYLGFEWIQTNNILAPIITHGIYSAVIL 341
           SGREDLKKLFAAWYERRQMKKIYSPLLEGLLALYLGFEWIQTNNILAPIITHGIYSAV+L
Sbjct: 292 SGREDLKKLFAAWYERRQMKKIYSPLLEGLLALYLGFEWIQTNNILAPIITHGIYSAVVL 351

Query: 342 GHGLWKIHDHRRRLHQRIQRLELEGNDSDRK 372
           GHGLWKIH+HRRRL +RIQ L+ E  +S+++
Sbjct: 352 GHGLWKIHEHRRRLRRRIQLLKSEEMNSNKR 382

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225427218|ref|XP_002280448.1| PREDICTED: uncharacterized protein LOC100247252 [Vitis vinifera] gi|297742104|emb|CBI33891.3| unnamed protein product [Vitis vinifera]

 Score =  521 bits (1343), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 278/357 (77%), Positives = 300/357 (84%), Gaps = 15/357 (4%)

Query: 1   MEIPLASLTSSRATTTTSLKLNGGLGRELCVSKKGTVKSGPNQMRWC----VRASAERSR 56
           MEIPL S T     TT+    +GG G   CV      +   N+ + C    VRASAERSR
Sbjct: 1   MEIPLISRTP-HPPTTSFCSSSGGAG--FCVLPATKKR---NESKRCFGGFVRASAERSR 54

Query: 57  SNEDIKNSDNSR--FTGSVMEVTTFDRGFGQPAASDFPVWDKIGAIVRLSYGIGIYGAMA 114
              D          FT   MEVTT +R F     ++FPVW+KIGA+VRLSYGIGIYGAMA
Sbjct: 55  EGIDGGREGERGGGFTSPAMEVTTLNRSFND---TEFPVWEKIGAVVRLSYGIGIYGAMA 111

Query: 115 LAGRFICSITGVDSMGGFHPSLDAIVEGLGYAAPPIMALLFILDDEVVKLSPHARAIRDV 174
           LAGRFICS+TG+DSMGGF+PSLDAI+EGLGYAAPPIMALLFILDDEVVKLSPHARAIRDV
Sbjct: 112 LAGRFICSMTGIDSMGGFNPSLDAILEGLGYAAPPIMALLFILDDEVVKLSPHARAIRDV 171

Query: 175 EDEELRSFFYGMSPWQFVLIVAASSVGEELFYRAAVQGALADIFLRGTDFLTDAQGMASL 234
           EDEE+RSFFYGMSPWQF+L+VAASSVGEELFYRAA+QGALADIFLRGT+F+TDA+GM SL
Sbjct: 172 EDEEIRSFFYGMSPWQFILMVAASSVGEELFYRAAIQGALADIFLRGTNFVTDARGMTSL 231

Query: 235 TGVLPPFVPFAQAFAAVITAALTGSLYYVATSPKDPTYVVAPVLRSRSGREDLKKLFAAW 294
           TGVLPPFVPFAQAFAAVITAALTGSLYYVA SPKDPTYVVAPVL+SRSGR DLKKLFAAW
Sbjct: 232 TGVLPPFVPFAQAFAAVITAALTGSLYYVAASPKDPTYVVAPVLQSRSGRADLKKLFAAW 291

Query: 295 YERRQMKKIYSPLLEGLLALYLGFEWIQTNNILAPIITHGIYSAVILGHGLWKIHDH 351
           YERRQMKKIYSPLLEGLLALYLGFEWIQTNNILAPIITHGIYS VILGHGLWKIHDH
Sbjct: 292 YERRQMKKIYSPLLEGLLALYLGFEWIQTNNILAPIITHGIYSTVILGHGLWKIHDH 348

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147779897|emb|CAN74782.1| hypothetical protein VITISV_016425 [Vitis vinifera]

 Score =  521 bits (1343), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 278/357 (77%), Positives = 300/357 (84%), Gaps = 15/357 (4%)

Query: 1   MEIPLASLTSSRATTTTSLKLNGGLGRELCVSKKGTVKSGPNQMRWC----VRASAERSR 56
           MEIPL S T     TT+    +GG G   CV      +   N+ + C    VRASAERSR
Sbjct: 1   MEIPLISRTP-HPPTTSFCSSSGGAG--FCVLPATKKR---NESKRCFGGFVRASAERSR 54

Query: 57  SNEDIKNSDNSR--FTGSVMEVTTFDRGFGQPAASDFPVWDKIGAIVRLSYGIGIYGAMA 114
              D          FT   MEVTT +R F     ++FPVW+KIGA+VRLSYGIGIYGAMA
Sbjct: 55  EGIDGGREGERGGGFTSPAMEVTTLNRSFND---TEFPVWEKIGAVVRLSYGIGIYGAMA 111

Query: 115 LAGRFICSITGVDSMGGFHPSLDAIVEGLGYAAPPIMALLFILDDEVVKLSPHARAIRDV 174
           LAGRFICS+TG+DSMGGF+PSLDAI+EGLGYAAPPIMALLFILDDEVVKLSPHARAIRDV
Sbjct: 112 LAGRFICSMTGIDSMGGFNPSLDAILEGLGYAAPPIMALLFILDDEVVKLSPHARAIRDV 171

Query: 175 EDEELRSFFYGMSPWQFVLIVAASSVGEELFYRAAVQGALADIFLRGTDFLTDAQGMASL 234
           EDEE+RSFFYGMSPWQF+L+VAASSVGEELFYRAA+QGALADIFLRGT+F+TDA+GM SL
Sbjct: 172 EDEEIRSFFYGMSPWQFILMVAASSVGEELFYRAAIQGALADIFLRGTNFVTDARGMTSL 231

Query: 235 TGVLPPFVPFAQAFAAVITAALTGSLYYVATSPKDPTYVVAPVLRSRSGREDLKKLFAAW 294
           TGVLPPFVPFAQAFAAVITAALTGSLYYVA SPKDPTYVVAPVL+SRSGR DLKKLFAAW
Sbjct: 232 TGVLPPFVPFAQAFAAVITAALTGSLYYVAASPKDPTYVVAPVLQSRSGRADLKKLFAAW 291

Query: 295 YERRQMKKIYSPLLEGLLALYLGFEWIQTNNILAPIITHGIYSAVILGHGLWKIHDH 351
           YERRQMKKIYSPLLEGLLALYLGFEWIQTNNILAPIITHGIYS VILGHGLWKIHDH
Sbjct: 292 YERRQMKKIYSPLLEGLLALYLGFEWIQTNNILAPIITHGIYSTVILGHGLWKIHDH 348

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356497037|ref|XP_003517371.1| PREDICTED: uncharacterized protein LOC100787147 isoform 2 [Glycine max]

 Score =  499 bits (1285), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 258/319 (80%), Positives = 279/319 (87%), Gaps = 2/319 (0%)

Query: 33  KKGTVKSGPNQMRWCVRASAERSRSNEDIKNSDNSRFTGSVMEVTTFDRGFGQPAASDFP 92
           KK      P     CV+ASAER+    D      S FT   MEVTTF+R     AA DFP
Sbjct: 37  KKKACFDAPRLAVRCVKASAERTGDTID-DGEARSGFTTPAMEVTTFNRSTFSDAA-DFP 94

Query: 93  VWDKIGAIVRLSYGIGIYGAMALAGRFICSITGVDSMGGFHPSLDAIVEGLGYAAPPIMA 152
           VW+KIGA+VRLSYGIGIYGAMA+AG FICSITG+DS+GGFH SLDAI+EGLGYAAPPIMA
Sbjct: 95  VWEKIGAVVRLSYGIGIYGAMAVAGSFICSITGIDSLGGFHLSLDAILEGLGYAAPPIMA 154

Query: 153 LLFILDDEVVKLSPHARAIRDVEDEELRSFFYGMSPWQFVLIVAASSVGEELFYRAAVQG 212
           LLFILDDEVVKLSPHARAIRDVEDEEL SFFYGMSPWQF+L+VAASSVGEELFYRAAVQG
Sbjct: 155 LLFILDDEVVKLSPHARAIRDVEDEELWSFFYGMSPWQFILMVAASSVGEELFYRAAVQG 214

Query: 213 ALADIFLRGTDFLTDAQGMASLTGVLPPFVPFAQAFAAVITAALTGSLYYVATSPKDPTY 272
           ALADIFLRG++ +TD QGMASLTGVLPPFVPFAQAFAAV+TA LTGSLYY+A SPKDPTY
Sbjct: 215 ALADIFLRGSNLITDVQGMASLTGVLPPFVPFAQAFAAVLTAVLTGSLYYMAASPKDPTY 274

Query: 273 VVAPVLRSRSGREDLKKLFAAWYERRQMKKIYSPLLEGLLALYLGFEWIQTNNILAPIIT 332
           VVAPVL+SRSGR+DLKKLF AWYE+RQMKKIYSPLLEGLLALYLGFEWIQT+NILAPIIT
Sbjct: 275 VVAPVLQSRSGRQDLKKLFEAWYEKRQMKKIYSPLLEGLLALYLGFEWIQTDNILAPIIT 334

Query: 333 HGIYSAVILGHGLWKIHDH 351
           HGIYS VILGHGLWKI+DH
Sbjct: 335 HGIYSTVILGHGLWKINDH 353

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248464|ref|NP_001239886.1| uncharacterized protein LOC100818224 [Glycine max] gi|255638406|gb|ACU19513.1| unknown [Glycine max]

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 254/319 (79%), Positives = 278/319 (87%), Gaps = 2/319 (0%)

Query: 33  KKGTVKSGPNQMRWCVRASAERSRSNEDIKNSDNSRFTGSVMEVTTFDRGFGQPAASDFP 92
           KK      P     CV+ASA+R+    D      + FT   MEVTTF+R     AA DFP
Sbjct: 69  KKKVCFDAPRLAVRCVKASAQRTGDTID-DGETRTGFTTPAMEVTTFNRTTFTDAA-DFP 126

Query: 93  VWDKIGAIVRLSYGIGIYGAMALAGRFICSITGVDSMGGFHPSLDAIVEGLGYAAPPIMA 152
           VW+KIGA+VRLSYG+GIYGAMA+AG FICSITG+DS+GGFH SLDAI+EGLGYAAPPIMA
Sbjct: 127 VWEKIGAVVRLSYGLGIYGAMAVAGSFICSITGIDSLGGFHLSLDAILEGLGYAAPPIMA 186

Query: 153 LLFILDDEVVKLSPHARAIRDVEDEELRSFFYGMSPWQFVLIVAASSVGEELFYRAAVQG 212
           LLFILDDEVVKLSPHARAIRDVEDEEL SFFYGMSPWQF+L+VAASSVGEELFYRAAVQG
Sbjct: 187 LLFILDDEVVKLSPHARAIRDVEDEELWSFFYGMSPWQFILMVAASSVGEELFYRAAVQG 246

Query: 213 ALADIFLRGTDFLTDAQGMASLTGVLPPFVPFAQAFAAVITAALTGSLYYVATSPKDPTY 272
           ALADIFLRG++ +TD QGMASLTGVLPPFVPFAQAFAAV+TA LTGSLYY+A SPKDPTY
Sbjct: 247 ALADIFLRGSNLITDVQGMASLTGVLPPFVPFAQAFAAVLTAVLTGSLYYMAASPKDPTY 306

Query: 273 VVAPVLRSRSGREDLKKLFAAWYERRQMKKIYSPLLEGLLALYLGFEWIQTNNILAPIIT 332
           VVAPVL+SRSGR+DLKKLF AWYE+RQMKKIYSPLLEGLLALYLG EWIQT+NILAPIIT
Sbjct: 307 VVAPVLQSRSGRQDLKKLFEAWYEKRQMKKIYSPLLEGLLALYLGCEWIQTDNILAPIIT 366

Query: 333 HGIYSAVILGHGLWKIHDH 351
           HGIYS VILGHGLWKI+DH
Sbjct: 367 HGIYSTVILGHGLWKINDH 385

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|219363603|ref|NP_001137056.1| uncharacterized protein LOC100217228 [Zea mays] gi|194698184|gb|ACF83176.1| unknown [Zea mays] gi|224029455|gb|ACN33803.1| unknown [Zea mays] gi|238010912|gb|ACR36491.1| unknown [Zea mays] gi|413918921|gb|AFW58853.1| hypothetical protein ZEAMMB73_865816 [Zea mays] gi|413918922|gb|AFW58854.1| hypothetical protein ZEAMMB73_865816 [Zea mays]

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 228/281 (81%), Positives = 259/281 (92%)

Query: 89  SDFPVWDKIGAIVRLSYGIGIYGAMALAGRFICSITGVDSMGGFHPSLDAIVEGLGYAAP 148
           ++  +WDK+GA+VRLSYGIGIYGAMALAGRFIC + G+D  GGFHPSL A+VEGLGYAAP
Sbjct: 90  AELAMWDKLGAVVRLSYGIGIYGAMALAGRFICQMAGIDCTGGFHPSLTALVEGLGYAAP 149

Query: 149 PIMALLFILDDEVVKLSPHARAIRDVEDEELRSFFYGMSPWQFVLIVAASSVGEELFYRA 208
           PIMALLFILDDEVVK SPHARAIRDVEDEELRSFF GMSPWQF+LIVAASS+GEELFYRA
Sbjct: 150 PIMALLFILDDEVVKYSPHARAIRDVEDEELRSFFCGMSPWQFILIVAASSIGEELFYRA 209

Query: 209 AVQGALADIFLRGTDFLTDAQGMASLTGVLPPFVPFAQAFAAVITAALTGSLYYVATSPK 268
           A+QGALADIFLR T+ + DA+G+ASL+G++PP VPFAQ FAAVITAALTG+LYYVAT+PK
Sbjct: 210 AIQGALADIFLRSTELMKDARGIASLSGIVPPLVPFAQTFAAVITAALTGTLYYVATTPK 269

Query: 269 DPTYVVAPVLRSRSGREDLKKLFAAWYERRQMKKIYSPLLEGLLALYLGFEWIQTNNILA 328
           DPTYVV P +RSR+GRE+LKKLFAAWYERRQM+KIYSPLLEG+LA YLGFEWIQT+NILA
Sbjct: 270 DPTYVVTPAMRSRTGRENLKKLFAAWYERRQMRKIYSPLLEGILAFYLGFEWIQTDNILA 329

Query: 329 PIITHGIYSAVILGHGLWKIHDHRRRLHQRIQRLELEGNDS 369
           P+ITHGIYS V+LGHGLWKIHDHRRRL QRIQ++  EG+ S
Sbjct: 330 PMITHGIYSTVVLGHGLWKIHDHRRRLRQRIQKVRSEGSSS 370

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|125542022|gb|EAY88161.1| hypothetical protein OsI_09601 [Oryza sativa Indica Group] gi|125584575|gb|EAZ25239.1| hypothetical protein OsJ_09043 [Oryza sativa Japonica Group]

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 225/283 (79%), Positives = 255/283 (90%), Gaps = 1/283 (0%)

Query: 89  SDFPVWDKIGAIVRLSYGIGIYGAMALAGRFICSITGVDSMGGFHPSLDAIVEGLGYAAP 148
           ++  +W+++GA+VRLSYGIGIY AMAL GRFIC + G+D  GGFHPSL A+VEGLGYAAP
Sbjct: 96  AELAMWERLGAVVRLSYGIGIYAAMALTGRFICQMAGIDCTGGFHPSLSALVEGLGYAAP 155

Query: 149 PIMALLFILDDEVVKLSPHARAIRDVEDEELRSFFYGMSPWQFVLIVAASSVGEELFYRA 208
           PIMALLFILDDEVVK SPHARAIRDVEDEELRSFFYGMSPWQF+LIV ASS+GEELFYR 
Sbjct: 156 PIMALLFILDDEVVKYSPHARAIRDVEDEELRSFFYGMSPWQFILIVTASSIGEELFYRV 215

Query: 209 AVQGALADIFLRGTDFLTDAQGMASLTGVLPPFVPFAQAFAAVITAALTGSLYYVATSPK 268
           AVQGALADIFLRGT+ + DA+G+ASL+G++PPFVPFAQ FAA ITAALTGSLYYVAT+PK
Sbjct: 216 AVQGALADIFLRGTELMKDARGIASLSGMVPPFVPFAQTFAAAITAALTGSLYYVATAPK 275

Query: 269 DPTYVVAPVLRSRSGREDLKKLFAAWYERRQMKKIYSPLLEGLLALYLGFEWIQTNNILA 328
           DPTYVV P +RS +GRE+LKKLFAAWYERRQM+KIYSPLLEG+LA YLGFEWIQT+NILA
Sbjct: 276 DPTYVVTPAMRSNTGRENLKKLFAAWYERRQMRKIYSPLLEGILAFYLGFEWIQTDNILA 335

Query: 329 PIITHGIYSAVILGHGLWKIHDHRRRLHQRIQRLELEG-NDSD 370
           P+ITHGIYS V+L HGLWKIHDHRRRL QRIQ +  EG  +SD
Sbjct: 336 PMITHGIYSTVVLCHGLWKIHDHRRRLRQRIQEIRQEGTTNSD 378

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297823321|ref|XP_002879543.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297325382|gb|EFH55802.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  483 bits (1243), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 242/305 (79%), Positives = 272/305 (89%), Gaps = 5/305 (1%)

Query: 48  VRASAERSRSNEDIKNSDNSR-FTGSVMEVTTFDRGFGQPAASDFPVWDKIGAIVRLSYG 106
           V ASAERS  +E I+ +D    F G+ MEVTT DRGF      DFP+WDKIGA+VRL+YG
Sbjct: 51  VIASAERS--SEGIEKTDGGGGFAGTAMEVTTLDRGFANSTTVDFPIWDKIGAVVRLTYG 108

Query: 107 IGIYGAMALAGRFICSITGVDSMGGFHPSLDAIVEGLGYAAPPIMALLFILDDEVVKLSP 166
           IGIYGAMA+AGRFICS+TG+DS GGF PSLDA++ GLGYA PPIMALLFILDDEVVKLSP
Sbjct: 109 IGIYGAMAVAGRFICSVTGIDSSGGFDPSLDALLAGLGYATPPIMALLFILDDEVVKLSP 168

Query: 167 HARAIRDVEDEELRSFFYGMSPWQFVLIVAASSVGEELFYRAAVQGALADIFLRGTDFLT 226
           HARAIRDVEDEELRSFF+GMSPWQF+LIVAASS+GEELFYR AVQGAL+DIFL+GT  +T
Sbjct: 169 HARAIRDVEDEELRSFFFGMSPWQFILIVAASSIGEELFYRVAVQGALSDIFLKGTQLMT 228

Query: 227 DAQGMASLTGVLPPFVPFAQAFAAVITAALTGSLYYVATSPKDPTYVVAPVLRSRSGRED 286
           D++GMASLTGV PPFVPFAQAFAAVITA LTGSLY++A SPKDPTY+VAPVLRSR  R+D
Sbjct: 229 DSRGMASLTGVFPPFVPFAQAFAAVITATLTGSLYFLAASPKDPTYIVAPVLRSR--RDD 286

Query: 287 LKKLFAAWYERRQMKKIYSPLLEGLLALYLGFEWIQTNNILAPIITHGIYSAVILGHGLW 346
            KKL +AWYE+RQMKKIYSPLLEGLLALYLG EW+QT+NILAP++THGIYSAVILGHGLW
Sbjct: 287 FKKLLSAWYEKRQMKKIYSPLLEGLLALYLGIEWVQTDNILAPMLTHGIYSAVILGHGLW 346

Query: 347 KIHDH 351
           KIHDH
Sbjct: 347 KIHDH 351

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357114532|ref|XP_003559054.1| PREDICTED: uncharacterized protein LOC100822795 [Brachypodium distachyon]

 Score =  483 bits (1242), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 223/283 (78%), Positives = 257/283 (90%)

Query: 89  SDFPVWDKIGAIVRLSYGIGIYGAMALAGRFICSITGVDSMGGFHPSLDAIVEGLGYAAP 148
           ++  +W+K+GA+VRLSYGIGIY AMALAGRFIC I G+DS GGFHPSL A+VEGLGYA+P
Sbjct: 84  AELAMWEKLGALVRLSYGIGIYAAMALAGRFICHIAGIDSTGGFHPSLTALVEGLGYASP 143

Query: 149 PIMALLFILDDEVVKLSPHARAIRDVEDEELRSFFYGMSPWQFVLIVAASSVGEELFYRA 208
           PIM LLFILDDEVVK SPHARAIRDVEDEELR+FF GMSPWQF+LIVAASSVGEELFYRA
Sbjct: 144 PIMVLLFILDDEVVKYSPHARAIRDVEDEELRTFFLGMSPWQFILIVAASSVGEELFYRA 203

Query: 209 AVQGALADIFLRGTDFLTDAQGMASLTGVLPPFVPFAQAFAAVITAALTGSLYYVATSPK 268
           A+QGALADIFLRGT+ + DA+G+ SL+G++PPFVPFAQ FAA ITAALTGSLYY+AT+PK
Sbjct: 204 ALQGALADIFLRGTELMKDARGIVSLSGMVPPFVPFAQTFAAAITAALTGSLYYLATAPK 263

Query: 269 DPTYVVAPVLRSRSGREDLKKLFAAWYERRQMKKIYSPLLEGLLALYLGFEWIQTNNILA 328
           DPTYVV PV+RS +GRE++KKLFAAWYERRQM+KIYSPLLEG+LA YLGFEWIQT+NILA
Sbjct: 264 DPTYVVTPVMRSHNGRENIKKLFAAWYERRQMRKIYSPLLEGILAFYLGFEWIQTDNILA 323

Query: 329 PIITHGIYSAVILGHGLWKIHDHRRRLHQRIQRLELEGNDSDR 371
           P+ITHGIYS V+LGHGLWKI DHRRRL QRIQ +   G+D+ +
Sbjct: 324 PMITHGIYSTVVLGHGLWKIQDHRRRLRQRIQEIRQSGSDTHQ 366

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357482397|ref|XP_003611484.1| hypothetical protein MTR_5g014430 [Medicago truncatula] gi|355512819|gb|AES94442.1| hypothetical protein MTR_5g014430 [Medicago truncatula]

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 247/306 (80%), Positives = 274/306 (89%), Gaps = 3/306 (0%)

Query: 49  RASAERSRSNEDIKNSDNSRFTG-SVMEVTT-FDRGFGQPA-ASDFPVWDKIGAIVRLSY 105
           +ASAER+    D +    + FT  + MEVTT F+RGF   A A+DFPVW+KIGA+VRLSY
Sbjct: 47  KASAERTGDTIDDRGETRTGFTTPAAMEVTTTFNRGFNDAAGAADFPVWEKIGAVVRLSY 106

Query: 106 GIGIYGAMALAGRFICSITGVDSMGGFHPSLDAIVEGLGYAAPPIMALLFILDDEVVKLS 165
           GIGIYGAMA+AG FICSITG+DS+GGFH SLDAIV+GLGYA PPIMALLFILDDEVVKLS
Sbjct: 107 GIGIYGAMAVAGSFICSITGIDSLGGFHLSLDAIVQGLGYAVPPIMALLFILDDEVVKLS 166

Query: 166 PHARAIRDVEDEELRSFFYGMSPWQFVLIVAASSVGEELFYRAAVQGALADIFLRGTDFL 225
           P+ARAIRDVEDEEL SFFYGMSP QF+L+VAASSVGEELFYRAAVQGALADIFLRG++ +
Sbjct: 167 PYARAIRDVEDEELWSFFYGMSPLQFILMVAASSVGEELFYRAAVQGALADIFLRGSNLI 226

Query: 226 TDAQGMASLTGVLPPFVPFAQAFAAVITAALTGSLYYVATSPKDPTYVVAPVLRSRSGRE 285
            D +GMASLTGVLPPFVPFAQA AAV+TA LTGSLYYVA SPKDPTY+VAPVL+SR+ R+
Sbjct: 227 QDVRGMASLTGVLPPFVPFAQALAAVLTAVLTGSLYYVAASPKDPTYIVAPVLQSRASRQ 286

Query: 286 DLKKLFAAWYERRQMKKIYSPLLEGLLALYLGFEWIQTNNILAPIITHGIYSAVILGHGL 345
           DLKKLF AWYE+RQMKKIYSPLLEGLLALYLGFEWIQTNNIL+PIITHGIYS VILGHGL
Sbjct: 287 DLKKLFEAWYEKRQMKKIYSPLLEGLLALYLGFEWIQTNNILSPIITHGIYSTVILGHGL 346

Query: 346 WKIHDH 351
           WKIHDH
Sbjct: 347 WKIHDH 352

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	372
TAIR|locus:2063484	382	AT2G35260 "AT2G35260" [Arabido	0.798	0.777	0.682	4.3e-109
TAIR|locus:2141000	422	AT4G17840 "AT4G17840" [Arabido	0.784	0.691	0.655	1.9e-99

TAIR|locus:2063484 AT2G35260 "AT2G35260" [Arabidopsis thaliana (taxid:3702)]

 Score = 1078 (384.5 bits), Expect = 4.3e-109, P = 4.3e-109
 Identities = 211/309 (68%), Positives = 240/309 (77%)

Query:    48 VRASAERSRSNEDIKNSDN---------SRFTGSVMEVTTFDRGFGQPAASDFPVWDKIG 98
             V ASAERS    + K +D           RF G+ MEVTT DRGF      DFP+WDKIG
Sbjct:    53 VIASAERSSEGIE-KTTDTVGGGGGGGAGRFAGTAMEVTTLDRGFANSTTVDFPIWDKIG 111

Query:    99 AIVRLSYGIGIYGAMALAGRFICSITGVDSMGGFHPSLDAIVEGLGYAAPPIMALLFILD 158
             A+VRL+YGIGIYGAMA+AGRFICS+TG+DS GGF PSLDA++ GLGYA PPIMALLFILD
Sbjct:   112 AVVRLTYGIGIYGAMAVAGRFICSVTGIDSSGGFDPSLDALLAGLGYATPPIMALLFILD 171

Query:   159 DEVVKLSPHARAIRDVEDEELRSFFYGMSPWQFVLIVAASSVGEELFYRAAVQGALADIF 218
             DEVVKLSPHARAIRDVEDEELRSFF+GMSPWQF+LIVAASS+GEELFYR AVQGAL+DIF
Sbjct:   172 DEVVKLSPHARAIRDVEDEELRSFFFGMSPWQFILIVAASSIGEELFYRVAVQGALSDIF 231

Query:   219 LRGTDFLTDAQGMASLTGXXXXXXXXXXXXXXXXXXXLTGSLYYVATSPKDPTYVVAPVL 278
             L+GT  +TD++GMASLTG                   LTGSLY++A SPKDPTY+VAPVL
Sbjct:   232 LKGTQLMTDSRGMASLTGVFPPFVPFAEVFAAVITATLTGSLYFLAASPKDPTYIVAPVL 291

Query:   279 RSRSGREDLKKLFAAWYERRQMKKIYSPXXXXXXXXXXGFEWIQTNNILAPIITHGIYSA 338
             RSR  R+D KKL +AWYE+RQMKKIYSP          G EW+QT+NILAP++THGIYSA
Sbjct:   292 RSR--RDDFKKLLSAWYEKRQMKKIYSPLLEGLLALYLGIEWVQTDNILAPMMTHGIYSA 349

Query:   339 VILGHGLWK 347
             VILGHGLWK
Sbjct:   350 VILGHGLWK 358

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0010155 "regulation of proton transport" evidence=RCA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

GO:0046777 "protein autophosphorylation" evidence=RCA

TAIR|locus:2141000 AT4G17840 "AT4G17840" [Arabidopsis thaliana (taxid:3702)]

 Score = 987 (352.5 bits), Expect = 1.9e-99, P = 1.9e-99
 Identities = 192/293 (65%), Positives = 222/293 (75%)

Query:    55 SRSNEDIKNSDNSRFTGSVMEVTTFDRGFGQPAASDFPVWDKIGAIVRLSYGIGIYGAMA 114
             S S+ +   + +    G   EVT+     G  +  DF  WDKIGAIVRLSYGIGIY  MA
Sbjct:   107 SFSSGEFVGAGSGGLAGPSGEVTSVGEFVGG-SGGDFKDWDKIGAIVRLSYGIGIYCGMA 165

Query:   115 LAGRFICSITGVDSMGGFHPSLDAIVEGLGYAAPPIMALLFILDDEVVKLSPHARAIRDV 174
             +AGRFIC + G+D  GGF+ SLD I+ GLGYA+PPIMALLFILDDEVVKLSPHARAIRDV
Sbjct:   166 VAGRFICEVAGIDYTGGFNASLDTIIAGLGYASPPIMALLFILDDEVVKLSPHARAIRDV 225

Query:   175 EDEELRSFFYGMSPWQFVLIVAASSVGEELFYRAAVQGALADIFLRGTDFLTDAQGMASL 234
             ED+ELR FF GMS WQF+L+V ASSVGEELFYRAA QGALADIFLRGTD ++D++GM +L
Sbjct:   226 EDDELRGFFQGMSAWQFILVVTASSVGEELFYRAAFQGALADIFLRGTDLISDSRGMVAL 285

Query:   235 TGXXXXXXXXXXXXXXXXXXXLTGSLYYVATSPKDPTYVVAPVLRSRSGREDLKKLFAAW 294
             TG                   LTGSLYY+A SPKDPTY++APVL++RS R++LKKLFAAW
Sbjct:   286 TGLLPPFVPFAQVFAATITAALTGSLYYIAASPKDPTYIMAPVLKTRSARDELKKLFAAW 345

Query:   295 YERRQMKKIYSPXXXXXXXXXXGFEWIQTNNILAPIITHGIYSAVILGHGLWK 347
             YERRQMKKIYSP          GFEWIQTNN+LAPIITHGIYSAV+LG+GLWK
Sbjct:   346 YERRQMKKIYSPLLEGLLGLYLGFEWIQTNNLLAPIITHGIYSAVVLGNGLWK 398


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.138   0.417    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      372       308   0.00078  116 3  11 22  0.38    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  615 (65 KB)
  Total size of DFA:  212 KB (2117 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.08u 0.16s 21.24t   Elapsed:  00:00:01
  Total cpu time:  21.08u 0.16s 21.24t   Elapsed:  00:00:01
  Start:  Sat May 11 08:25:54 2013   End:  Sat May 11 08:25:55 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	372
PF02517	91	Abi: CAAX protease self-immunity; InterPro: IPR003	98.03
TIGR03008	222	pepcterm_CAAX CAAX prenyl protease-related protein	95.37
COG1266	226	Predicted metal-dependent membrane protease [Gener	95.0

>PF02517 Abi: CAAX protease self-immunity; InterPro: IPR003675 Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide is removed by one of the CAAX prenyl proteases)

Probab=98.03  E-value=7.6e-06  Score=60.38  Aligned_cols=88  Identities=23%  Similarity=0.361  Sum_probs=65.1

Q ss_pred             chhhhHHhhhccchhHHHHHHHHhhhhHHHHhhCCCcccccccchhhcccCCCcchHHHHHHHHHHHHHhcceeeeeeCC
Q 017370          188 PWQFVLIVAASSVGEELFYRAAVQGALADIFLRGTDFLTDAQGMASLTGVLPPFVPFAQAFAAVITAALTGSLYYVATSP  267 (372)
Q Consensus       188 pwQFiliVaAssvgEElFyR~AvQGaladiflrgt~l~~d~~GmasLtgv~PpFvPFAq~fAavltaaLTGslYyva~sp  267 (372)
                      .+.++..+....+.||++||..+|..+.+.  .+.                        ..+.++++.+=|.+.+..   
T Consensus         4 ~~~~~~~~~~~~~~EEl~fRg~l~~~l~~~--~~~------------------------~~a~~is~~~f~~~H~~~---   54 (91)
T PF02517_consen    4 LIFFLVMILIAPIAEELFFRGFLFNRLRRR--FNP------------------------WFAILISSLLFALWHLPN---   54 (91)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cch------------------------HHHHHHHHHHHHHHHHhh---
Confidence            466777888899999999999998877654  110                        456666666666554432   


Q ss_pred             CCCceEEeecccCccchHHHHHHHHHHHHHHhhhHhhhHHHHHHHHHHhcceeeeeCcchhhHHHhhhhhhh
Q 017370          268 KDPTYVVAPVLRSRSGREDLKKLFAAWYERRQMKKIYSPLLEGLLALYLGFEWIQTNNILAPIITHGIYSAV  339 (372)
Q Consensus       268 kDPtYvvaPv~~s~~~r~dlkklf~aWyErRqmkKIYSPLlEglLalYLGfEWiqT~NILAPiiTHgiYS~V  339 (372)
                                                        -.. -+.-.++|+.+|.-+..|+|+++|++.|+++..+
T Consensus        55 ----------------------------------~~~-~~~~~~~g~~~~~~~~~t~sl~~~i~~H~~~n~~   91 (91)
T PF02517_consen   55 ----------------------------------GPQ-FIYAFLFGLLFGYLYLRTGSLWAAIIAHALWNLV   91 (91)
T ss_pred             ----------------------------------hHH-HHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHcC
Confidence                                              001 2666788999999999999999999999998653

The family contains the Q03530 from SWISSPROT CAAX prenyl protease []. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding []. While these proteins are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity []. This family also includes lysostaphin resistance protein A [].; GO: 0016020 membrane

>TIGR03008 pepcterm_CAAX CAAX prenyl protease-related protein

Probab=95.37  E-value=0.018  Score=52.57  Aligned_cols=38  Identities=24%  Similarity=0.413  Sum_probs=30.4

Q ss_pred             HHHHHHhcceeeeeCcchhhHHHhhhhh----hhhcccccch
Q 017370          310 GLLALYLGFEWIQTNNILAPIITHGIYS----AVILGHGLWK  347 (372)
Q Consensus       310 glLalYLGfEWiqT~NILAPiiTHgiYS----~VvlGhGLwk  347 (372)
                      .+.|+.+|.-+..|+|+..||+.|.+..    ..|+.-|-|.
T Consensus       179 ~l~Gli~~~l~~~tgsL~~~I~~H~~~N~ll~~~vl~~~~w~  220 (222)
T TIGR03008       179 LIAGLAYNLLLLRTGSIMACILAHAVTNGLLGLWVLLTGAWS  220 (222)
T ss_pred             HHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHcCCcC
Confidence            4558889999999999999999998754    4566677664

The CAAX prenyl protease, in eukaryotes, catalyzes three covalent modifications, including cleavage and acylation, at the C-terminus of certain proteins in a process connected to protein sorting. This family describes a bacterial protein family homologous to one domain of the CAAX-processing enzyme. Members of this protein family are found in genomes that carry a predicted protein sorting system, PEP-CTERM/exosortase, usually in the vicinity of the EpsH homolog that is the hallmark of the system. The function of this protein is unknown, but it may relate to protein motification.

>COG1266 Predicted metal-dependent membrane protease [General function prediction only]

Probab=95.00  E-value=0.05  Score=44.30  Aligned_cols=27  Identities=26%  Similarity=0.645  Sum_probs=21.3

Q ss_pred             HHHHHhcceeeeeCcchhhHHHhhhhh
Q 017370          311 LLALYLGFEWIQTNNILAPIITHGIYS  337 (372)
Q Consensus       311 lLalYLGfEWiqT~NILAPiiTHgiYS  337 (372)
                      ..++-+|+-+.-|+|+..||+.|..+.
T Consensus       185 ~~gli~~~~~~~t~~l~~~i~~H~~~N  211 (226)
T COG1266         185 IAGLILGLLYLRTGSLWVPILLHALIN  211 (226)
T ss_pred             HHHHHHHHHHHHhCCcHHHHHHHHHHH
Confidence            344455555579999999999999998

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00