Citrus Sinensis ID: 017437


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-
MAMAETESERRRVIVRNILSKEECEELELIHKSCSTVGYRPNVFSTTLSHLIATNSSHFIVPFVPIRERLKEKVEEFFGCEFELVIEFTGLISWARGASIGWHCDDNRPYLKQRHFTDVAMYTADSRNVHSVDEVTHGERLTLTLWFSRDSSHDEDAKLISILSQKLLHRSDKVPQLCLPLPASSNMYWFSPNQASPDELGCNICWARMDVLGYDIYYSQNTSSALDCSELLLEPLQLARGDNLFHQPFANILHALQVVQFFHWKASEFPTSKFETEASKVLHLSQSQKENISNLKSVFVKNNQLAETVFRPVIINEKEQQSFSWANFSAAVTAWEDYIRKLHKQLLNSLPHWRTHQSIFSCPLDESLEGT
cccccccccccEEEEcccccHHHHHHHHHHHHHcccccccccEEEccHHHHHHHcccccccccHHHHHHHHHHHHHHHcccEEEEEEEEcEEEEccccccccccccccccccccccccEEEEcccccccccccccccccEEEEEEEEcccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccEEEEEEEEEEEEEEEEEccccccccHHHHHcccEEEccccccccHHHHHHHHHHHHHHEEccccccccccccccccccEEEccHHHHHHHccccccccccccHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEccccccccc
cccEcccccccEEEEcccccHHHHHHHHHHHcccccccccccEEEcccHHHHHcccccccccHHHHHHHHHHHHHHHHcccEEEEEEEccEEEccccccEccccccccHHHHHcccccEEEEEcccccEEEEcEcccccEEEEEEEEcccccccccHHHHHHHHHHHHccccccccccccccccccEEEEcccccccccccccEEEEEEEEEcEEEEccccccccccHHHHHccccEEccccccccHHHHHHHHHHHHHHHHHEcccHccccccccccccEEEccHHHHHHHcccccHHHccccHHHHHcccccccccccEEccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEcccccccccc
MAMAETESERRRVIVRNILSKEECEELELIHKscstvgyrpnvFSTTLSHLIatnsshfivpfvPIRERLKEKVEEFFGCEFELVIEFTGLISWargasigwhcddnrpylkqrhftdvamytadsrnvhsvdevthgeRLTLTLWfsrdsshdedAKLISILSQKllhrsdkvpqlclplpassnmywfspnqaspdelgcniCWARMDVLGYDIYysqntssaldcSELLLEPlqlargdnlfhqpFANILHALQVVQFFhwkasefptskfetEASKVLHLSQSQKENISNLKSVFVKNnqlaetvfrpviinekeqqsfswANFSAAVTAWEDYIRKLHKQLLNslphwrthqsifscpldeslegt
mamaeteserrrvivrnilskeeceELELIHKSCSTVGYRPNVFSTTLSHLIATNSSHFIVPFVPIRERLKEKVEEFFGCEFELVIEFTGLISWARGASIGWHCDDNRPYLKQRHFTDVAMYTADSRNVHSVDEVTHGERLTLTLWfsrdsshdeDAKLISILSQKLLHRSDKVPQLCLPLPASSNMYWFSPNQASPDELGCNICWARMDVLGYDIYYSQNTSSALDCSELLLEPLQLARGDNLFHQPFANILHALQVVQFFHWKASEFPTSKFETEASKVLHLSQSQKENISNLKSVFVKNNQLAETVFRPVIINekeqqsfsWANFSAAVTAWEDYIRKLHKQLLNSLphwrthqsifscpldeslegt
MAMAETESERRRVIVRNILSKEECEELELIHKSCSTVGYRPNVFSTTLSHLIATNSSHFIVPFVPIRERLKEKVEEFFGCEFELVIEFTGLISWARGASIGWHCDDNRPYLKQRHFTDVAMYTADSRNVHSVDEVTHGERLTLTLWFSRDSSHDEDAKLISILSQKLLHRSDKVPQLCLPLPASSNMYWFSPNQASPDELGCNICWARMDVLGYDIYYSQNTSSALDCSELLLEPLQLARGDNLFHQPFANILHALQVVQFFHWKASEFPTSKFETEASKVLHLSQSQKENISNLKSVFVKNNQLAETVFRPVIINEKEQQSFSWANFSAAVTAWEDYIRKLHKQLLNSLPHWRTHQSIFSCPLDESLEGT
************VIVRNILSKEECEELELIHKSCSTVGYRPNVFSTTLSHLIATNSSHFIVPFVPIRERLKEKVEEFFGCEFELVIEFTGLISWARGASIGWHCDDNRPYLKQRHFTDVAMYTADSRNVHSVDEVTHGERLTLTLWFSRD*****DAKLISILSQKLLHRSDKVPQLCLPLPASSNMYWFSPNQASPDELGCNICWARMDVLGYDIYYSQNTSSALDCSELLLEPLQLARGDNLFHQPFANILHALQVVQFFHWKASEFPT**********************NLKSVFVKNNQLAETVFRPVIINEKEQQSFSWANFSAAVTAWEDYIRKLHKQLLNSLPHWRTHQSIFSCP********
*************IVRNILSKEECEELELIHKSCSTVGYRPNVFSTTLSHLIATNSSHFIVPFVPIRERLKEKVEEFFGCEFELVIEFTGLISWARGASIGWHCDDNRPYLKQRHFTDVAMYTADSRNVHSVDEVTHGERLTLTLWFSRDSSHDEDAKLISI**********************SNMYWF**NQASPDELGCNICWARMDVLGYDIYYSQNTSSALDCSELLLEPLQLARGDNLFHQPFANILHALQVVQFFHWKA******************************SVFVKNNQLAETVFRPVIINEKEQQSFSWANFSAAVTAWEDYIRKLHKQLLNSLPHWRTHQSIFSC**D******
**********RRVIVRNILSKEECEELELIHKSCSTVGYRPNVFSTTLSHLIATNSSHFIVPFVPIRERLKEKVEEFFGCEFELVIEFTGLISWARGASIGWHCDDNRPYLKQRHFTDVAMYTADSRNVHSVDEVTHGERLTLTLWFSRDSSHDEDAKLISILSQKLLHRSDKVPQLCLPLPASSNMYWFSPNQASPDELGCNICWARMDVLGYDIYYSQNTSSALDCSELLLEPLQLARGDNLFHQPFANILHALQVVQFFHWKASEFPTSKFETEASKVLHLSQSQKENISNLKSVFVKNNQLAETVFRPVIINEKEQQSFSWANFSAAVTAWEDYIRKLHKQLLNSLPHWRTHQSIFSCPLDESLEGT
*******SERRRVIVRNILSKEECEELELIHKSCSTVGYRPNVFSTTLSHLIATNSSHFIVPFVPIRERLKEKVEEFFGCEFELVIEFTGLISWARGASIGWHCDDNRPYLKQRHFTDVAMYTADSRNVHSVDEVTHGERLTLTLWFSRDSSHDEDAKLISILSQKLLHRSDKVPQLCLPLPASSNMYWFSPNQASPDELGCNICWARMDVLGYDIYYSQNTSSALDCSELLLEPLQLARGDNLFHQPFANILHALQVVQFFHWKASEFPTSK*****SKVLHLSQSQKENISNLKSVFVKNNQLAETVFRPVIINEKEQQSFSWANFSAAVTAWEDYIRKLHKQLLNSLPHWRTHQSIFSCPLD******
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MAMAETESERRRVIVRNILSKEECEELELIHKSCSTVGYRPNVFSTTLSHLIATNSSHFIVPFVPIRERLKEKVEEFFGCEFELVIEFTGLISWARGASIGWHCDDNRPYLKQRHFTDVAMYTADSRNVHSVDEVTHGERLTLTLWFSRDSSHDEDAKLISILSQKLLHRSDKVPQLCLPLPASSNMYWFSPNQASPDELGCNICWARMDVLGYDIYYSQNTSSALDCSELLLEPLQLARGDNLFHQPFANILHALQVVQFFHWKASEFPTSKFETEASKVLHLSQSQKENISNLKSVFVKNNQLAETVFRPVIINEKEQQSFSWANFSAAVTAWEDYIRKLHKQLLNSLPHWRTHQSIFSCPLDESLEGT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query371
225424464381 PREDICTED: uncharacterized protein LOC10 0.970 0.944 0.634 1e-131
225424462401 PREDICTED: uncharacterized protein LOC10 0.970 0.897 0.602 1e-129
255573244397 oxidoreductase, putative [Ricinus commun 0.973 0.909 0.600 1e-127
356525042374 PREDICTED: uncharacterized protein LOC10 0.975 0.967 0.596 1e-122
356525040394 PREDICTED: uncharacterized protein LOC10 0.975 0.918 0.566 1e-120
297737583370 unnamed protein product [Vitis vinifera] 0.886 0.889 0.565 1e-116
145326686369 2-oxoglutarate (2OG) and Fe(II)-dependen 0.938 0.943 0.586 1e-111
297841517389 oxidoreductase [Arabidopsis lyrata subsp 0.938 0.894 0.556 1e-109
79375455389 2-oxoglutarate (2OG) and Fe(II)-dependen 0.938 0.894 0.556 1e-108
449481306396 PREDICTED: uncharacterized LOC101218213 0.975 0.914 0.535 1e-108
>gi|225424464|ref|XP_002285154.1| PREDICTED: uncharacterized protein LOC100256078 isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 241/380 (63%), Positives = 280/380 (73%), Gaps = 20/380 (5%)

Query: 7   ESERRRVIVRNILSKEECEELELIHKSCSTVGYRPNVFSTTLSHLIATNSSHFIVPFVPI 66
           +S   RVI++N +S EEC+ELE IHKSC TVGYRPNVFSTTLSHLIAT S H I+PFVPI
Sbjct: 3   DSRHPRVILKNFVSVEECKELEFIHKSCCTVGYRPNVFSTTLSHLIATRSPHLILPFVPI 62

Query: 67  RERLKEKVEEFFGCEFELVIEFTGLISWARGASIGWHCDDNRPYLKQRHFT--------- 117
           RERLKEK+EE FGCE+EL IEFTGLISW RGASIGWH DDNRPYLKQR F          
Sbjct: 63  RERLKEKLEECFGCEYELFIEFTGLISWTRGASIGWHSDDNRPYLKQRDFADGDPTTIEP 122

Query: 118 ---DVAMYTADSRNVHSVDEVTHGERLTLTLWFSRDSSHDEDAKLISILSQKLLHRSDKV 174
              DV MYTAD RN+HSVDE+T GERLTLTLWFSRD SHDEDAKL+ +LSQ  LH S+  
Sbjct: 123 LAGDVVMYTADCRNIHSVDEITDGERLTLTLWFSRDCSHDEDAKLVCLLSQSQLHSSNNE 182

Query: 175 PQLCLPLPASSNMYWFSPNQASPDELGCNICWARMDVLGYDIYYSQNTS------SALDC 228
           P   LPLPASS+MYWFSP+  S  + G +ICWARM +LGYD++  Q+ S      S+ D 
Sbjct: 183 PDPYLPLPASSSMYWFSPDHISQHQSGFDICWARMHILGYDLFSPQDKSCFSALDSSCDF 242

Query: 229 SELLLEPLQLARGDNLFHQPFANILHALQVVQFFHWKASEFPTSKFETEASK-VLHLSQS 287
           SE L+E LQLARGD LF   F NILH LQVVQF+ WKAS+  TSK E E    V+ LS+S
Sbjct: 243 SERLMEQLQLARGDELFDLEFVNILHVLQVVQFYSWKASKLQTSKVERETENLVVKLSES 302

Query: 288 QKENISNLKSVFVKNNQLAETVFRPVIINEKEQQSFSWANFSAAVTAWEDYIRKLHKQLL 347
           Q+E I+NL++ F+ + QLAETV       E  Q SF W +FSAAV AWEDY R+L K+L+
Sbjct: 303 QREKINNLRTTFLNDQQLAETVL-GTSCGESRQHSFQWVSFSAAVGAWEDYTRELRKELV 361

Query: 348 NSLPHWRTHQSIFSCPLDES 367
            SLP+WRTHQ+IFS P D S
Sbjct: 362 LSLPYWRTHQAIFSVPFDGS 381




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225424462|ref|XP_002285151.1| PREDICTED: uncharacterized protein LOC100256078 isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255573244|ref|XP_002527551.1| oxidoreductase, putative [Ricinus communis] gi|223533101|gb|EEF34860.1| oxidoreductase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356525042|ref|XP_003531136.1| PREDICTED: uncharacterized protein LOC100788718 isoform 2 [Glycine max] Back     alignment and taxonomy information
>gi|356525040|ref|XP_003531135.1| PREDICTED: uncharacterized protein LOC100788718 isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|297737583|emb|CBI26784.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|145326686|ref|NP_001077790.1| 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase domain-containing protein [Arabidopsis thaliana] gi|71905463|gb|AAZ52709.1| expressed protein [Arabidopsis thaliana] gi|332196625|gb|AEE34746.1| 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase domain-containing protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297841517|ref|XP_002888640.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata] gi|297334481|gb|EFH64899.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|79375455|ref|NP_176975.2| 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase domain-containing protein [Arabidopsis thaliana] gi|56236062|gb|AAV84487.1| At1g68080 [Arabidopsis thaliana] gi|58531340|gb|AAW78592.1| At1g68080 [Arabidopsis thaliana] gi|60547659|gb|AAX23793.1| hypothetical protein At1g68080 [Arabidopsis thaliana] gi|71905461|gb|AAZ52708.1| expressed protein [Arabidopsis thaliana] gi|332196623|gb|AEE34744.1| 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase domain-containing protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449481306|ref|XP_004156144.1| PREDICTED: uncharacterized LOC101218213 [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query371
TAIR|locus:2200291389 AT1G68080 [Arabidopsis thalian 0.652 0.622 0.528 1.7e-109
TAIR|locus:2200291 AT1G68080 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 641 (230.7 bits), Expect = 1.7e-109, Sum P(2) = 1.7e-109
 Identities = 132/250 (52%), Positives = 167/250 (66%)

Query:   118 DVAMYTADSRNVHSVDEVTHGERLTLTLWFSRDSSHDEDAKLISILSQKLLHRSDKVPQL 177
             DV MYTAD RN+HSVDEVT GERLTL LWFSRDSSHDED+KL+S LSQ   H      ++
Sbjct:   146 DVIMYTADDRNIHSVDEVTDGERLTLALWFSRDSSHDEDSKLLSRLSQCTSH------EV 199

Query:   178 CLPLPASSNMYWFSPNQ-ASPDELGCNICWARMDVLGYDIYYSQNTSSALDCSELLLEPL 236
             CLPLPAS+NMYWF P+Q  S   +G ++C AR+ +LG+D++  Q    + D SE L+ PL
Sbjct:   200 CLPLPASTNMYWFCPHQDGSNQNIGFDVCVARLHLLGFDVHSLQGEDHSTDASEQLMGPL 259

Query:   237 QLARGDNLFHQPFANILHALQVVQFFHWKASEFPTSKFETEA-SKVLHLSQSQKENISNL 295
             QLA+G  L  + FANILHALQVVQF+HWKASE  TS  E +   +V  +S SQ E I+ L
Sbjct:   260 QLAKGGKLLTRKFANILHALQVVQFYHWKASELVTSNVENDTLEEVKAMSHSQLETINAL 319

Query:   296 KSVFVKNNQLAETVFRPVIINEKEQQSFSWANFSAAVTAWEDYIRKLHKQLLNSLPHWRT 355
             KSVF+ +  L  T F      E  + S      + AVT+WE+Y  KL K+LL+SLP W+T
Sbjct:   320 KSVFLLDENLVATTFGYSCSGEDRKDSLDLTGIALAVTSWEEYSCKLLKELLSSLPQWKT 379

Query:   356 HQSIFSCPLD 365
             +Q+I     D
Sbjct:   380 YQTIHKVESD 389


GO:0005506 "iron ion binding" evidence=IEA
GO:0005634 "nucleus" evidence=ISM
GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA
GO:0031418 "L-ascorbic acid binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00030642001
SubName- Full=Chromosome chr1 scaffold_5, whole genome shotgun sequence; (381 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 371
KOG4459471 consensus Membrane-associated proteoglycan Lepreca 99.87
KOG4459471 consensus Membrane-associated proteoglycan Lepreca 99.83
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 98.97
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 98.37
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 96.77
COG3128229 PiuC Uncharacterized iron-regulated protein [Funct 95.21
PLN00052310 prolyl 4-hydroxylase; Provisional 91.62
KOG3710280 consensus EGL-Nine (EGLN) protein [Signal transduc 90.26
>KOG4459 consensus Membrane-associated proteoglycan Leprecan [Function unknown] Back     alignment and domain information
Probab=99.87  E-value=1.1e-25  Score=225.38  Aligned_cols=269  Identities=22%  Similarity=0.129  Sum_probs=234.8

Q ss_pred             CCCcceeeeeccccccCcCCccccccCCcccccccccc------------------------ceeeeccC--------CC
Q 017437           80 CEFELVIEFTGLISWARGASIGWHCDDNRPYLKQRHFT------------------------DVAMYTAD--------SR  127 (371)
Q Consensus        80 L~~~LyfSfTHLVcwCRsASh~VHaDN~~P~~~~RDYS------------------------RlVgFSSG--------~E  127 (371)
                      ..+..++.+++...||++...++|.+.+.|+.++|+..                        =+|+-+.|        --
T Consensus        97 a~fg~~le~a~Cl~rCkg~~~~~~~~~~~~~~df~~r~py~YL~~ay~k~~~l~kAv~aa~tflv~~Pdde~ik~~ldyY  176 (471)
T KOG4459|consen   97 AIFGHLLERAACLRRCKGELAARHGSDRSPYLDFRPRLPYQYLQFAYFKVGELEKAVAAAHTFLVANPDDEDIKQNLDYY  176 (471)
T ss_pred             HHHHHHHHHHHHHHHHhcccccCCCcccchhhhhccchHHHHHHHHHHHhhhHHHHHHhcceeeecCCcHHHHHHHHHHH
Confidence            44567888888888999999999999888888877744                        33333333        33


Q ss_pred             c---ccccccccccceeeEEEecccCCCchhHHHHHHHhhhhhcccCCCCCCccCCCCCCCCccccC-CC-CCCCCCCcc
Q 017437          128 N---VHSVDEVTHGERLTLTLWFSRDSSHDEDAKLISILSQKLLHRSDKVPQLCLPLPASSNMYWFS-PN-QASPDELGC  202 (371)
Q Consensus       128 N---pHGVkAVTkGqRCAlALWFTlDp~H~E~erll~~l~~~~~~~~~~~p~~~lp~pas~~myw~~-~~-~~s~~~~g~  202 (371)
                      +   .|.+..+|.++|=....||.++.++    ...+.++++       ||..++++|.|.+|||++ |- +.+.+++||
T Consensus       177 q~~l~~s~d~l~DlE~~~~~~~Fir~v~~----y~~~d~~~~-------v~~ve~AL~e~~~~~~~Cr~lceg~~e~i~f  245 (471)
T KOG4459|consen  177 QTMLGVSEDELTDLERREHEQWFIRGVRL----YSGEDPRQC-------VPEVELALPESFNMYEECRALCEGSYENIGF  245 (471)
T ss_pred             HhccCCCcccccccccchHHHHHHHHhhh----ccccCchhc-------chhHHHHHHHHHHHHHHHHhhcCCccccccc
Confidence            4   7889999999999999999999887    222222332       356789999999999999 44 389999999


Q ss_pred             eeeeeeeeeeeeEEEeecCCCCccChhhhhccceeeccCCccchhhhHhHHHHHhhheeeecccCCCCCccccccccc-h
Q 017437          203 NICWARMDVLGYDIYYSQNTSSALDCSELLLEPLQLARGDNLFHQPFANILHALQVVQFFHWKASEFPTSKFETEASK-V  281 (371)
Q Consensus       203 di~~ar~~~lg~~~~~~~~~~~~~d~~ell~~p~~l~r~~~l~~~~f~nilhalqvvqfy~wkas~l~~~~~~~~~~~-v  281 (371)
                      |.+ +|++-++++|..-+.++..- .++.|++ ++...|+..+++.|+|+.|   ++||+|||.|+ .|+..+..+.. +
T Consensus       246 ~~~-~~l~~~~~ai~d~~~e~~~C-~~~cl~~-L~p~~g~~~v~k~~as~y~---ylQFa~ykise-~tqA~~~~~syLl  318 (471)
T KOG4459|consen  246 DYN-EQLNDLYRAIADLYLEVLEC-KLNCLAK-LAPHTGGKTVLKFFASHYH---YLQFAYYKISE-VTQAAECAASYLL  318 (471)
T ss_pred             hhh-hhcchHHHHHHHhcccHHHH-HHHHHhc-cCcCCCCCcHHHHHHHHHH---HHHHHHhhHHH-HHHhhccccceee
Confidence            999 99999999999999998888 8899999 9999999999999999999   99999999999 66667777666 9


Q ss_pred             hccchhhHhhhhcccceeeccccchhhhccccccccccccccccchhhHHHhhHHHHHHHHHHHHHhccCcceeeceeee
Q 017437          282 LHLSQSQKENISNLKSVFVKNNQLAETVFRPVIINEKEQQSFSWANFSAAVTAWEDYIRKLHKQLLNSLPHWRTHQSIFS  361 (371)
Q Consensus       282 ~~~s~~q~e~i~~l~s~~l~d~~~~~~~f~~~~~~~~~~~~f~w~~~~~av~~we~y~~~l~k~l~~~lp~wr~~~~i~~  361 (371)
                      ..+|+++.+++...++++++|+++..+-|++.|+.+...+.-.-..+..+++-|+.|.++.-++|....|.|.|.++|.+
T Consensus       319 f~~sh~v~r~~l~y~q~~r~d~~l~a~~~~~d~ea~e~~~~~~~~~~~~~~a~~~~~dd~~~~el~~t~~d~~t~~a~~k  398 (471)
T KOG4459|consen  319 FDPSHSVMRQNLAYYQVHRLDHELHADNFGPDPEAEECWNEPPLYTELDYFALLYLNDDFEGGELLFTEPDAKTYTAISK  398 (471)
T ss_pred             eCCcHHHHHHHHHHHHHHhccccchhhhcCcCchHHHHhccchHHHHHHhhccHhhcCccccccceecCCcccchhhccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCc
Q 017437          362 CPLDE  366 (371)
Q Consensus       362 v~~~~  366 (371)
                      +.++-
T Consensus       399 ~~~~r  403 (471)
T KOG4459|consen  399 PECGR  403 (471)
T ss_pred             ccccc
Confidence            87753



>KOG4459 consensus Membrane-associated proteoglycan Leprecan [Function unknown] Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>COG3128 PiuC Uncharacterized iron-regulated protein [Function unknown] Back     alignment and domain information
>PLN00052 prolyl 4-hydroxylase; Provisional Back     alignment and domain information
>KOG3710 consensus EGL-Nine (EGLN) protein [Signal transduction mechanisms] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query371
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 48.7 bits (115), Expect = 2e-06
 Identities = 62/363 (17%), Positives = 115/363 (31%), Gaps = 111/363 (30%)

Query: 16  RNILSKEECEELELIHKSCSTVGYRPNVFSTTLSHLIATNSSHFIVPFVPIRERLKEKVE 75
           ++ILSKEE +    I  S        +  S TL           +  F  +  + +E V+
Sbjct: 43  KSILSKEEIDH---IIMS-------KDAVSGTL----------RL--FWTLLSKQEEMVQ 80

Query: 76  EFFGCEFELVIEFTGLISWARGASIGWHCDDNRP------YLKQRH--FTDVAMYTADSR 127
           +F      +  +F      +         +  +P      Y++QR   + D  ++     
Sbjct: 81  KFVEEVLRINYKFL----MSP-----IKTEQRQPSMMTRMYIEQRDRLYNDNQVFA--KY 129

Query: 128 NVHSVDEVTHGERLTLTLWFSRDSSHDEDAKLI---------SILSQKLLHRSDKVPQLC 178
           NV  +        L L               ++         + ++  +   S KV Q  
Sbjct: 130 NVSRLQPY-----LKLRQALLELRPAK---NVLIDGVLGSGKTWVALDVC-LSYKV-QCK 179

Query: 179 LPLPASSNMYWFS-PNQASPDELGCNICWARMDVLGYDIYYSQNTSSALDCSE---LLLE 234
           +       ++W +  N  SP+ +        +  L Y I    N +S  D S    L + 
Sbjct: 180 MD----FKIFWLNLKNCNSPETV-----LEMLQKLLYQI--DPNWTSRSDHSSNIKLRIH 228

Query: 235 PLQLARGDNLFHQPFANILHALQVVQ-FFHWKASEFPTSKFETEASKVLHLSQSQKENIS 293
            +Q      L  +P+ N L  L  VQ    W A       F     K+L  ++       
Sbjct: 229 SIQAELRRLLKSKPYENCLLVLLNVQNAKAWNA-------FNLS-CKILLTTRF------ 274

Query: 294 NLKSVFVKNNQLAETVFRPVIINEKEQQSFSWANFSAAVTAWEDYIRKLHKQLLN----S 349
             K V    + L+      + + +    + +            D ++ L  + L+     
Sbjct: 275 --KQVT---DFLSAATTTHISL-DHHSMTLT-----------PDEVKSLLLKYLDCRPQD 317

Query: 350 LPH 352
           LP 
Sbjct: 318 LPR 320


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query371
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 98.99
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 98.6
3itq_A216 Prolyl 4-hydroxylase, alpha subunit domain protei; 97.8
2jig_A224 Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A { 97.74
3kt7_A 633 PKHD-type hydroxylase TPA1; double-stranded beta h 92.04
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure
Probab=98.99  E-value=5.5e-10  Score=101.91  Aligned_cols=153  Identities=15%  Similarity=0.231  Sum_probs=86.9

Q ss_pred             CCceEEecCccCHHHHHHHHHHHhhhccCC-CCCCCC---CCc-ccceee------cCC-Cc--cccccccchhHHHHHH
Q 017437            9 ERRRVIVRNILSKEECEELELIHKSCSTVG-YRPNVF---STT-LSHLIA------TNS-SH--FIVPFVPIRERLKEKV   74 (371)
Q Consensus         9 ~sqRVVlDGvlS~eEC~eL~~La~aaataG-YRp~t~---~~t-~~~l~a------~ga-~~--~lvp~~~vsEkvR~~v   74 (371)
                      +..++|+|+|||++||+.|...+......| |++...   ... ......      .+. +.  .+..|++.-++++..+
T Consensus        25 ~~g~~Vid~fLs~ee~~~L~~~~~~~~~~g~~~~a~i~~~~~~~~~~iR~d~i~wl~~~~~~~~~~~~l~~~i~~l~~~l  104 (247)
T 2hbt_A           25 KHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHC  104 (247)
T ss_dssp             HTSEEEESSSSCHHHHHHHHHHHHHHHHTTCSCSCCEEECCSSSTTCEECCEEEEECSCSTTCHHHHHHHHHHHHHHHHT
T ss_pred             cCCEEEECCCCCHHHHHHHHHHHHhhhhcCCccccccccccccccccccccceeeecccccchhHHHHHHHHHHHHHHHH
Confidence            357899999999999999999988643333 442210   010 011100      000 00  0001233333443333


Q ss_pred             HhhccCCCccee----eeecccccc-CcCCccccccCCcc---------cccc---------------cc--c--c----
Q 017437           75 EEFFGCEFELVI----EFTGLISWA-RGASIGWHCDDNRP---------YLKQ---------------RH--F--T----  117 (371)
Q Consensus        75 EsYF~L~~~Lyf----SfTHLVcwC-RsASh~VHaDN~~P---------~~~~---------------RD--Y--S----  117 (371)
                      ...    ..+|.    +..|+.|.- .+....+|.|+.+.         |++.               .+  .  +    
T Consensus       105 n~~----lGl~~i~~~~e~~~~~Y~~~G~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~  180 (247)
T 2hbt_A          105 NGK----LGSYKINGRTKAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPK  180 (247)
T ss_dssp             TTT----STTCCEEEECCEEEEEECSSSCCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCB
T ss_pred             hhh----cCcccccccceEEEEEecCCCCcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcC
Confidence            222    24552    457888433 37778899998420         1221               11  1  1    


Q ss_pred             --ceeeeccCCCcccccccccccceeeEEEecccCCCchhHHHHHHHhhhhh
Q 017437          118 --DVAMYTADSRNVHSVDEVTHGERLTLTLWFSRDSSHDEDAKLISILSQKL  167 (371)
Q Consensus       118 --RlVgFSSG~ENpHGVkAVTkGqRCAlALWFTlDp~H~E~erll~~l~~~~  167 (371)
                        |||.|.|+.+++|+|.+ +.|.|++|+.||+.++...+ .+.-..+++..
T Consensus       181 ~grlv~F~s~~~~~H~V~p-~~~~R~sit~W~~~~~~~~~-a~~~~~~~~~~  230 (247)
T 2hbt_A          181 FDRLLFFWSDRRNPHEVQP-AYATRYAITVWYFDADERAR-AKVKYLTGEKG  230 (247)
T ss_dssp             TTEEEEEECSTTCCEEECC-BSSCEEEEEEEEEEHHHHHH-HHHHCC---CC
T ss_pred             CCEEEEEecCCCceeeecc-CCCEEEEEEEEEcCCchhhh-hhhhccccccc
Confidence              99999999889999999 67999999999998776544 33323334443



>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Back     alignment and structure
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A Back     alignment and structure
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query371
d2a1xa1296 Phytanoyl-CoA dioxygenase, PhyH {Human (Homo sapie 89.52
>d2a1xa1 b.82.2.9 (A:43-338) Phytanoyl-CoA dioxygenase, PhyH {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: PhyH-like
domain: Phytanoyl-CoA dioxygenase, PhyH
species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.52  E-value=0.72  Score=38.17  Aligned_cols=39  Identities=23%  Similarity=0.130  Sum_probs=25.0

Q ss_pred             chhHHHHHHHhhccCCCcceeeeeccccccC-----cCCccccccC
Q 017437           66 IRERLKEKVEEFFGCEFELVIEFTGLISWAR-----GASIGWHCDD  106 (371)
Q Consensus        66 vsEkvR~~vEsYF~L~~~LyfSfTHLVcwCR-----sASh~VHaDN  106 (371)
                      ..+++..+++..++.  .+.+..+++++.-.     +..++||.|.
T Consensus        93 ~~~~i~~~~~~llg~--~~~~~~~~~~~k~p~~~~~~~~~~wHqD~  136 (296)
T d2a1xa1          93 TLPEILKYVECFTGP--NIMAMHTMLINKPPDSGKKTSRHPLHQDL  136 (296)
T ss_dssp             HCHHHHHHHHHHHCS--SEEEEEEEEEEECCC--------CCBCGG
T ss_pred             ccHHHHHHHHHhhcc--ccceecccccccccccccccccCCcccCc
Confidence            457889999999974  46666777773211     2357899984