Citrus Sinensis ID: 017568

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------37
Protein Sequence
MPYYADNDDDVTDFDDYDPTPYDGGYDITLTYGRPLPPSDETCYPSSSASDGDFDYARPKFSSHSEPSAYADEALNNEYSSYARPKPRPGFVPGSGGGSGYGGRPQPQPAYGFQPGMGRPEPYGSGRPESEYASGYAKRPDSQEYGSGYGKRPESEEYGSGYGRKPDSESGESGFGGRTESEYGGSAYGRKPEYESGYGQKPEYESGYGGKPGYESGYGSKPEFESGYGRKPEYESGYGISMMIGPAMGVSPMNLAMGVNPIMSPGMAANRSMNLGMGVSQSMNPGMVASRSTSRGMGGNLNLNTKAGTAVVRSMENLRGSRVMGGLMTKKGIRSPVVMVMRDVVMMMNIAAGLMSMAMDARRRYGFEI
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccEEEHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccccccccccccHHccccccccccccEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
mpyyadndddvtdfddydptpydggyditltygrplppsdetcypsssasdgdfdyarpkfsshsepsayadealnneyssyarpkprpgfvpgsgggsgyggrpqpqpaygfqpgmgrpepygsgrpeseyasgyakrpdsqeygsgygkrpeseeygsgygrkpdsesgesgfggrteseyggsaygrkpeyesgygqkpeyesgyggkpgyesgygskpefesgygrkpeyesgygismmigpamgvspmnlamgvnpimspgmaanrsmnlgmgvsqsmnpgmvasrstsrgmggnlnlntkAGTAVVRSMENlrgsrvmgglmtkkgirspvVMVMRDVVMMMNIAAGLMSMAMDARRRYGFEI
Flexible Loop (DISEMBL)
mpyyadndddvtdfdDYDPTPYDGGYDITLTYGRPLPPSDETCYPSSSASDGDFDYARPKFSSHSEPSAYADEALNNEYSSYARPKPRPGFVPGSGGGSGYGGRPQPQPAYGFQPGMGRPEPYGSGRPESEYAsgyakrpdsqeygsgygkrpeseeygsgygrkpdsesgesgfggrteseyggsaygrkpeYESGYGQKPEYESGYGGKPGYESGYGSKPEFESGYGRKPEYESGYGISMMIGPAMGVSPMNLAMGVNPIMSPGMAANRSMNLGMGVSQSMNPGMVASRSTSRGMGGNLNLNTKAGTAVVRSMEnlrgsrvmgglmtkkgirspvVMVMRDVVMMMNIAAGLMSMAMDARRRYGFEI
Low Complexity Region (SEG)
MPyyadndddvtdfddydptpydggydITLTYGRPLPPSDETCYPSSSASDGDFDYARPKFSSHSEPSAYADEALNNEYSSYARPKprpgfvpgsgggsgyggrpqpqpAYGFQPGMGRPEPYGSGRPESEYASGYAKRPDSQEYGSGYGKRPESEEYGSGYGRKPDSESGESGFGGRTESEYGGSAYGRKPEYESGYGQKPEYESGYGGKPGYESGYGSKPEFESGYGRKPEYESGYGISMMIGPAMGVSPMNLAMGVNPIMSPGMAANRSMNLGMGVSQSMNPGMVASRSTSRGMGGNLNLNTKAGTAVVRSMENLRGSRVMGGLMTKKGIRSPvvmvmrdvvmmmNIAAGLMSMAMDARRRYGFEI
Disordered region (IsUnstruct)
**************DDYDPTPYDGGYDITLTYG************************************************************************************************************************************************************************************************************YGISMMIGP***************************************************************************RVMGGLMTKKGIRSPVVMVMRDVVMMMNIAAGLMSMA***********
Disordered Region (DISOPRED)
**********************************************************************************************************************************************************************************************************************************************************************************************************************************************SPVVMVMRDVVMMMNIAAGLMSMAMDARRRYGF**
Disordered Region (DISEMBL)
MPYYADNDDDVTDFDDYDPTPYDGGYDITLTYGRPLPPS**********SDGDFDYAR*********SAYADEALNNEYSSYARPKPRPGFVPGSGGGSGYGGRPQPQPAYGFQPGMGRPEPYG******************************************************TESEYGGSAYGRKPEYESGYGQKPEYESGYGGKPGYESGYGSKPEFESGYGRKPEYESGYGISMMIGPAMGVSPMNLAMGVNPIMSPGMAANRSMNLGMGVSQSMNPGMVASRSTSRGMGGNLNLNTKAGTAVVRSMENLRGSRVMGGLMTKKGIRSPVVMVMRDVVMMMNIAAGLMSMAMDARRRYGFEI
Disordered Region (DISPRO)
********DDVTDFDDYDPTPYDGGYDITLTYGRPLPPSDETCYPS*************************************************************************************************************************************************************************************YGRKPEYESGYGISMMIGPAMGVSPMNLAMGVNPIMSPGMAANRSMNLGMGVSQSMNPGMVASRSTSRGMGGNLNLNTKAGTAVVRS**************TKKGIRSPVVMVMRDVVMMMNIAAGLMSMAMD**RRYGFEI
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPYYADNDDDVTDFDDYDPTPYDGGYDITLTYGRPLPPSDETCYPSSSASDGDFDYARPKFSSHSEPSAYADEALNNEYSSYARPKPRPGFVPGSGGGSGYGGRPQPQPAYGFQPGMGRPEPYGSGRPESEYASGYAKRPDSQEYGSGYGKRPESEEYGSGYGRKPDSESGESGFGGRTESEYGGSAYGRKPEYESGYGQKPEYESGYGGKPGYESGYGSKPEFESGYGRKPEYESGYGISMMIGPAMGVSPMNLAMGVNPIMSPGMAANRSMNLGMGVSQSMNPGMVASRSTSRGMGGNLNLNTKAGTAVVRSMENLRGSRVMGGLMTKKGIRSPVVMVMRDVVMMMNIAAGLMSMAMDARRRYGFEI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	369	2.2.26 [Sep-21-2011]
Q9FKA5	381	Uncharacterized protein A	yes	no	0.601	0.582	0.553	6e-43

>sp|Q9FKA5|Y5957_ARATH Uncharacterized protein At5g39570 OS=Arabidopsis thaliana GN=At5g39570 PE=1 SV=1

 Score =  175 bits (443), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 140/253 (55%), Positives = 163/253 (64%), Gaps = 31/253 (12%)

Query: 1   MPYYADNDDDVTDFDDYDPTPYDGGYDITLTYGRPLPPSDETCYPSSSASDGDFDYARPK 60
           MPYY  +D+DV DFD++DPTPY GGYDIT+ YGRP+PPSDETCYP SS  D DF+Y RP+
Sbjct: 1   MPYYTRDDNDVDDFDEFDPTPYSGGYDITVIYGRPIPPSDETCYPLSSGVDDDFEYERPE 60

Query: 61  FSSHSEPSAYADEALNNEYSSYARPKPRPGFVPGSGGGSGYGGRPQPQPAYGFQPGMGRP 120
           F+   EPSAY DEALN EYSSY+RPKPRP F P SGGG    G  +P P YG + G GR 
Sbjct: 61  FTQIHEPSAYGDEALNTEYSSYSRPKPRPAFRPDSGGGGHVQGE-RPNPGYGSESGYGR- 118

Query: 121 EPYGSGRPESEYASG--------YAKRPDSQEYGSGYGKRPESE-EYGSG--------YG 163
                 +PESEY SG        Y +RP+ Q YGSGYG R E+E EYGSG        YG
Sbjct: 119 ------KPESEYGSGYGGQTEVEYGRRPE-QSYGSGYGGRTETESEYGSGGGGRTEVEYG 171

Query: 164 RKPDSESGESGFGGRTESEYGGS-AYGRKPEYESGYGQKPEYESGYGGKPGYES-GYGSK 221
           R+P+S  G SG+GGR+ESEY    +YGR  E E GY +KP Y      + GY    YG  
Sbjct: 172 RRPESGLG-SGYGGRSESEYERKPSYGRSEEQEEGY-RKPSYGRSEEQEEGYRKPSYGRS 229

Query: 222 PEFESGYGRKPEY 234
            E E GY RKP Y
Sbjct: 230 EEQEEGY-RKPSY 241

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	369
224116092	415	predicted protein [Populus trichocarpa]	0.579	0.515	0.560	2e-46
225452887	383	PREDICTED: uncharacterized protein At5g3	0.593	0.571	0.516	3e-44
224141425	337	predicted protein [Populus trichocarpa]	0.588	0.643	0.510	3e-43
255578278	374	hypothetical protein RCOM_0537780 [Ricin	0.607	0.598	0.488	2e-41
334188078	381	uncharacterized protein [Arabidopsis tha	0.601	0.582	0.553	4e-41
24417262	381	unknown [Arabidopsis thaliana]	0.601	0.582	0.553	5e-41
224113533	219	predicted protein [Populus trichocarpa]	0.468	0.789	0.585	6e-40
356572926	363	PREDICTED: uncharacterized protein At5g3	0.552	0.561	0.498	2e-36
297805780	384	predicted protein [Arabidopsis lyrata su	0.590	0.567	0.524	2e-36
388519005	331	unknown [Lotus japonicus]	0.501	0.558	0.484	5e-34

>gi|224116092|ref|XP_002332006.1| predicted protein [Populus trichocarpa] gi|222832515|gb|EEE70992.1| predicted protein [Populus trichocarpa]

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 149/266 (56%), Positives = 166/266 (62%), Gaps = 52/266 (19%)

Query: 19  PTPYDGGYDITLTYGRPLPPSDETCYPSSSASDGDFDYARPKFSSHSEPSAYADEALNNE 78
           PTPY GGYDI LTYGRP+PPSDETCYP SSAS G+ DY RP +SS+SEPSAYADEAL  E
Sbjct: 20  PTPYGGGYDIALTYGRPIPPSDETCYPISSAS-GEIDYDRPNYSSYSEPSAYADEALETE 78

Query: 79  YSSYARPKPRPGFVPGSGGGSGYGGRPQPQPAYGFQPGMGRP--------------EPYG 124
           YSSYARPKPRPG   G           +PQPAYGFQPGM RP              E YG
Sbjct: 79  YSSYARPKPRPGSTYG-----------EPQPAYGFQPGMNRPGLEYESDGYVKPANEEYG 127

Query: 125 SGRPESEYASGYAKRPDSQEYGSGYGKRPESE----------EYGSGYGRKPDSESGESG 174
             RPESEY SG   +P S+EY SGYG+RPESE          EYGSG GR+ +SE G   
Sbjct: 128 R-RPESEYGSGGYGKPQSEEYRSGYGRRPESEYESGGHVRPSEYGSGDGRRQESEYGSG- 185

Query: 175 FGGRTESEYGGSAYGRKP--EYESGYGQKP-EYESGYGGKPGYESGYGS---KP---EFE 225
              R +SE  GS YGR+P  EYESG  +KP EY +GYG +   ES YGS   KP   E+ 
Sbjct: 186 -NARPQSEEYGSGYGRRPEGEYESGGYEKPSEYGTGYGRRK--ESEYGSGYEKPQSDEYG 242

Query: 226 SGYGRKP--EYESGYGISMMIGPAMG 249
           SGYGR+P  EY SGY      G   G
Sbjct: 243 SGYGRRPDSEYGSGYEKPTEYGSGYG 268

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225452887|ref|XP_002283932.1| PREDICTED: uncharacterized protein At5g39570 [Vitis vinifera]

 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 139/269 (51%), Positives = 160/269 (59%), Gaps = 50/269 (18%)

Query: 4   YADNDDDVTDFDDYDPTPYDGGYDITLTYGRPLPPSDETCYPSSSASDGDFDYARPKFSS 63
           Y  N+D   +FD+YDPTPY GGYDIT+ YGRPL PS+ETCYP SS S GD DY RP ++S
Sbjct: 3   YNRNEDVSDEFDEYDPTPYGGGYDITVIYGRPLEPSEETCYPISSKS-GDIDYDRPSYTS 61

Query: 64  HSEPSAYADEALNNEYSSYARPKPRPGFVPGSGGGSGYGGRPQPQPAYGFQPGMGRPEPY 123
            SEPSAY DEAL NEY SYARPKPRP            G       +        +P+P 
Sbjct: 62  CSEPSAYGDEALENEYKSYARPKPRPVLGYAGPPPGQGGF----GGSGDGGEYGYQPKPP 117

Query: 124 GSGRPESEYASGYAKRPD----SQEYGSGYGKRPESE----EYGSGYGRKPDSESGESGF 175
            S   E EY SG+ ++PD    S EYGSGYG++PE E    EYGSGYGRKP+ E   S +
Sbjct: 118 SSFGGEGEYGSGHGRKPDYEEPSSEYGSGYGRKPECEQPSSEYGSGYGRKPEYEQPSSEY 177

Query: 176 GGRTESEYGGSAYGRKPEYE-------SGYGQKPEYE-------SGYGGKPGYE------ 215
                    GS YGRKPEYE       SGYG+KPEYE       SGYG KP YE      
Sbjct: 178 ---------GSGYGRKPEYEQPSSEYGSGYGRKPEYEQPSTEYGSGYGRKPEYEQPSSEY 228

Query: 216 -SGYGSKPEFE-------SGYGRKPEYES 236
            SGYG +PEFE       SGYGR+PEYE+
Sbjct: 229 GSGYGRRPEFEQPSSEYGSGYGRRPEYEA 257

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224141425|ref|XP_002324073.1| predicted protein [Populus trichocarpa] gi|222867075|gb|EEF04206.1| predicted protein [Populus trichocarpa]

 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 143/280 (51%), Positives = 168/280 (60%), Gaps = 63/280 (22%)

Query: 1   MPYYAD-NDDDVTDFDDYDPTPYDGGYDITLTYGRPLPPSDETCYPSSSASDGD-FDYAR 58
           M YY+   DD V D+D+YDPTPY GGYDI LTYGRP+PPSD+TC+P SS+S  D  DY R
Sbjct: 1   MSYYSRGQDDQVDDYDEYDPTPYGGGYDIALTYGRPIPPSDDTCHPISSSSPSDEIDYDR 60

Query: 59  PKFSSHSEPSAYADEALNNEYSSYARPKPRPGFVPGSGGGSGYGGRPQPQPAYGFQPG-- 116
           P +SSHSEPS YADEAL  EYSSY+RPKPRP        GS YGG   PQPAYG QPG  
Sbjct: 61  PNYSSHSEPSPYADEALETEYSSYSRPKPRP--------GSSYGG---PQPAYGLQPGSE 109

Query: 117 -------------MGRP--EPYGSGRPE--SEYASGYAKRPDSQE---------YGSGYG 150
                         G+P  E YGSG  E  SEY SGY +RP+ ++         +GSGYG
Sbjct: 110 YGSAGYEKPASEEYGKPHSEEYGSGGYEKPSEYGSGYGRRPEYEDGSGYEKPSKHGSGYG 169

Query: 151 KRPESEEYGSGYGRKPDSESGESGFGGRTESEYGGSAYGRKPEYESGYGQKPEYESGYG- 209
           ++ ES +YGSGY R P SE   SG+  R E+EY GS Y +  EY SGYG+ PE E G G 
Sbjct: 170 RKQES-DYGSGYER-PQSEEYGSGYSRRPEAEY-GSGYEKPSEYSSGYGRNPESEYGSGY 226

Query: 210 ---------GKPGYESGYGSKP---------EFESGYGRK 231
                     + GY SG+G +P         E  SGYGRK
Sbjct: 227 EKSSEHEERTETGYGSGHGRRPGSEYEEDGSEHVSGYGRK 266

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255578278|ref|XP_002530006.1| hypothetical protein RCOM_0537780 [Ricinus communis] gi|223530485|gb|EEF32368.1| hypothetical protein RCOM_0537780 [Ricinus communis]

 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 145/297 (48%), Positives = 171/297 (57%), Gaps = 73/297 (24%)

Query: 1   MPYYADNDDDVTDFDDYDPTPYDGGYDITLTYGRPLPPSDETCYPSSSASDGDFDYARPK 60
           MPYY  ++DDV DFD++DPTPY GGYD+ LTYGRPLPPSDETCY +S+ +D D DY RP 
Sbjct: 1   MPYYTRSEDDVNDFDEFDPTPYGGGYDLALTYGRPLPPSDETCYQNSAIADDDVDYDRPN 60

Query: 61  FSSHSEPSAYADEALNNEYSSYARPKPR--------------------PGFVPGSGG--- 97
           F+S++EPSAY D+ L  EY+SY+RPKPR                    PGF PGSGG   
Sbjct: 61  FTSYAEPSAYNDDILQEEYNSYSRPKPRPGFIPGGGIGGDPYSRPHAAPGFQPGSGGYGG 120

Query: 98  ------GSGYGGRPQ---PQPAYGFQPGMGRP--EPYGSG---RPESEYAS-GYAKRPDS 142
                  SGYG RP        YG      RP  E YGSG   + +SEY S GY +RP+S
Sbjct: 121 VSEYEKPSGYGRRPDSEYGSGGYGGGTEYERPSGEDYGSGHGRKQDSEYGSGGYGRRPES 180

Query: 143 QEYGSGYG-KRPESEEYGSGYGRKPDSESGESGFGGRTESEYGGSAYG------------ 189
            EYGSG G +RP SEEYGSGYGRK +SE G  G+G R E+EY GS YG            
Sbjct: 181 -EYGSGGGYERPSSEEYGSGYGRKQESEYGSGGYGRRPEAEY-GSGYGGRPETEYGGGGG 238

Query: 190 --------RKPEY--ESGYGQKPEYESGYGGKPGYESGYGSKPEFESGYGRK-PEYE 235
                   RKP Y  E GYG++ EYE     +P     YG  P    GYGR+  EYE
Sbjct: 239 SEYGGGYGRKPSYGEEGGYGERTEYE-----RP----SYGDDPPRRPGYGRQDDEYE 286

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|334188078|ref|NP_568565.2| uncharacterized protein [Arabidopsis thaliana] gi|75171219|sp|Q9FKA5.1|Y5957_ARATH RecName: Full=Uncharacterized protein At5g39570 gi|9758332|dbj|BAB08888.1| unnamed protein product [Arabidopsis thaliana] gi|16604364|gb|AAL24188.1| AT5g39570/MIJ24_40 [Arabidopsis thaliana] gi|23308191|gb|AAN18065.1| At5g39570/MIJ24_40 [Arabidopsis thaliana] gi|332007065|gb|AED94448.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 140/253 (55%), Positives = 163/253 (64%), Gaps = 31/253 (12%)

Query: 1   MPYYADNDDDVTDFDDYDPTPYDGGYDITLTYGRPLPPSDETCYPSSSASDGDFDYARPK 60
           MPYY  +D+DV DFD++DPTPY GGYDIT+ YGRP+PPSDETCYP SS  D DF+Y RP+
Sbjct: 1   MPYYTRDDNDVDDFDEFDPTPYSGGYDITVIYGRPIPPSDETCYPLSSGVDDDFEYERPE 60

Query: 61  FSSHSEPSAYADEALNNEYSSYARPKPRPGFVPGSGGGSGYGGRPQPQPAYGFQPGMGRP 120
           F+   EPSAY DEALN EYSSY+RPKPRP F P SGGG    G  +P P YG + G GR 
Sbjct: 61  FTQIHEPSAYGDEALNTEYSSYSRPKPRPAFRPDSGGGGHVQGE-RPNPGYGSESGYGR- 118

Query: 121 EPYGSGRPESEYASG--------YAKRPDSQEYGSGYGKRPESE-EYGSG--------YG 163
                 +PESEY SG        Y +RP+ Q YGSGYG R E+E EYGSG        YG
Sbjct: 119 ------KPESEYGSGYGGQTEVEYGRRPE-QSYGSGYGGRTETESEYGSGGGGRTEVEYG 171

Query: 164 RKPDSESGESGFGGRTESEYGGS-AYGRKPEYESGYGQKPEYESGYGGKPGYES-GYGSK 221
           R+P+S  G SG+GGR+ESEY    +YGR  E E GY +KP Y      + GY    YG  
Sbjct: 172 RRPESGLG-SGYGGRSESEYERKPSYGRSEEQEEGY-RKPSYGRSEEQEEGYRKPSYGRS 229

Query: 222 PEFESGYGRKPEY 234
            E E GY RKP Y
Sbjct: 230 EEQEEGY-RKPSY 241

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|24417262|gb|AAN60241.1| unknown [Arabidopsis thaliana]

 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 140/253 (55%), Positives = 163/253 (64%), Gaps = 31/253 (12%)

Query: 1   MPYYADNDDDVTDFDDYDPTPYDGGYDITLTYGRPLPPSDETCYPSSSASDGDFDYARPK 60
           MPYY  +D+DV DFD++DPTPY GGYDIT+ YGRP+PPSDETCYP SS  D DF+Y RP+
Sbjct: 1   MPYYTRDDNDVDDFDEFDPTPYSGGYDITVIYGRPIPPSDETCYPLSSGVDDDFEYERPE 60

Query: 61  FSSHSEPSAYADEALNNEYSSYARPKPRPGFVPGSGGGSGYGGRPQPQPAYGFQPGMGRP 120
           F+   EPSAY DEALN EYSSY+RPKPRP F P SGGG    G  +P P YG + G GR 
Sbjct: 61  FTXIHEPSAYGDEALNTEYSSYSRPKPRPAFRPDSGGGGHVQGE-RPNPGYGSESGYGR- 118

Query: 121 EPYGSGRPESEYASG--------YAKRPDSQEYGSGYGKRPESE-EYGSG--------YG 163
                 +PESEY SG        Y +RP+ Q YGSGYG R E+E EYGSG        YG
Sbjct: 119 ------KPESEYGSGYGGQTEVEYGRRPE-QSYGSGYGGRTETESEYGSGGGGRTEVEYG 171

Query: 164 RKPDSESGESGFGGRTESEYGGS-AYGRKPEYESGYGQKPEYESGYGGKPGYES-GYGSK 221
           R+P+S  G SG+GGR+ESEY    +YGR  E E GY +KP Y      + GY    YG  
Sbjct: 172 RRPESGLG-SGYGGRSESEYERKPSYGRSEEQEEGY-RKPSYGRSEEQEEGYRKPSYGRS 229

Query: 222 PEFESGYGRKPEY 234
            E E GY RKP Y
Sbjct: 230 EEQEEGY-RKPSY 241

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224113533|ref|XP_002332567.1| predicted protein [Populus trichocarpa] gi|222832729|gb|EEE71206.1| predicted protein [Populus trichocarpa]

 Score =  171 bits (432), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 127/217 (58%), Positives = 141/217 (64%), Gaps = 44/217 (20%)

Query: 19  PTPYDGGYDITLTYGRPLPPSDETCYPSSSASDGDFDYARPKFSSHSEPSAYADEALNNE 78
           PTPY GGYDI LTYGRP+PPSDETCYP SSAS GD+D  RP +SS+SEPSAYADEAL  E
Sbjct: 20  PTPYGGGYDIALTYGRPIPPSDETCYPISSAS-GDYD--RPNYSSYSEPSAYADEALETE 76

Query: 79  YSSYARPKPRPGFVPGSGGGSGYGGRPQPQPAYGFQPGMGRP--------------EPYG 124
           YSSYARPKPRP        GS YG   +PQPAYGFQP M RP              E YG
Sbjct: 77  YSSYARPKPRP--------GSTYG---EPQPAYGFQPAMNRPGLEYESDGYVKPANEEYG 125

Query: 125 SGRPESEYASGYAKRPDSQEYGSGYGKRPESE----------EYGSGYGRKPDSESGESG 174
             RPESEY SG   +P S+EY SGYG+RPESE          EYGSG GR+ +SE G   
Sbjct: 126 R-RPESEYGSGGYGKPQSEEYRSGYGRRPESEYESGGHVRPSEYGSGDGRRQESEYGSG- 183

Query: 175 FGGRTESEYGGSAYGRKP--EYESGYGQKP-EYESGY 208
              R +SE  GS YG +P  EYESG  +KP EY +GY
Sbjct: 184 -NARPQSEEYGSGYGSRPEGEYESGGYEKPSEYGTGY 219

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356572926|ref|XP_003554616.1| PREDICTED: uncharacterized protein At5g39570-like [Glycine max]

 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 129/259 (49%), Positives = 154/259 (59%), Gaps = 55/259 (21%)

Query: 19  PTPYDGGYDITLTYGRPLPPSDETCYPSSSASDGDFDYARPKFSSHSEPSAYADEALNNE 78
           PTPY GGYDI LTYGRP+ PS+ETCYP  ++SD +FDY RP+++S++EPSAY DEAL  E
Sbjct: 23  PTPYGGGYDIHLTYGRPVSPSEETCYPLGASSDENFDYDRPQYTSYAEPSAYGDEALATE 82

Query: 79  YSSYARPKPRP---GFVPGSGG----------GSGYGGRP-----------QPQPAYGFQ 114
           YSSY+RPKPRP   GF P +G           GSGYG +            + +  YG  
Sbjct: 83  YSSYSRPKPRPAPAGFNPAAGSGYGRKQESEYGSGYGRKEEGEYGSGYGGRKEESEYG-- 140

Query: 115 PGMGRPE---------------PYGSG---RPESEYASGYAKRPDSQEYGSGYGKRPESE 156
            G GR E                YGSG   + E E+ SGY  R +  EYGSGYG R +  
Sbjct: 141 SGYGRKEEGEYGSGYGGRKEDSEYGSGYGRKQEDEFGSGYGGRKEESEYGSGYGGRKQES 200

Query: 157 EYGSGY-GRKPDSESGESGFGGRT-ESEYGGSAYGRKP--EYESGYG---QKPEYESGYG 209
           EYGSGY GRK +SE G SG+GGR  ESEYG    GRK   EY SGYG   Q+ EY SGYG
Sbjct: 201 EYGSGYGGRKEESEYG-SGYGGRKEESEYGSGYDGRKEESEYGSGYGGRKQESEYGSGYG 259

Query: 210 GKPG---YESGYGSKPEFE 225
           G+     Y SGYG + E+E
Sbjct: 260 GRKQESEYGSGYGGRSEYE 278

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297805780|ref|XP_002870774.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297316610|gb|EFH47033.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 138/263 (52%), Positives = 160/263 (60%), Gaps = 45/263 (17%)

Query: 1   MPYYADNDDDVTDFDDYDPTPYDGGYDITLTYGRPLPPSDETCYPSSSASDGDFDYARPK 60
           MPYY  ++DDV DFD++DPTPY GGYDIT+ YGRP+PPSDETCYP SS  D DF+Y RP+
Sbjct: 1   MPYYTRDEDDVDDFDEFDPTPYSGGYDITVIYGRPIPPSDETCYPLSSGVDDDFEYERPE 60

Query: 61  FSSHSEPSAYADEALNNEYSSYARPKPRPGFVPGSGGGSGYGGRPQPQPAYGFQPGMGRP 120
           F+   EPSAY DEALN EYSSY+RPKPRP F P SGGG    G  +P P YG   G GR 
Sbjct: 61  FTQIHEPSAYGDEALNTEYSSYSRPKPRPAFRPDSGGGGHVQGE-RPNPGYGSGSGYGR- 118

Query: 121 EPYGSGRPESEYASG------------------YAKRPDSQEYGSGYGKRPESE-EYGSG 161
                 +PESEY SG                  Y +RP+ Q YGSGYG R E+E EYGSG
Sbjct: 119 ------KPESEYGSGYGGQTETESGYGGQTEVEYGRRPE-QSYGSGYGGRTETESEYGSG 171

Query: 162 --------YGRKPDSESGESGFGGRTESEYGGS-AYGRKPEYESGYGQKPEYESGYGGKP 212
                   YGR+P     ESG+GGR+E+EY    +YGR  E E GY +KP Y      + 
Sbjct: 172 GGGRTEVEYGRRP-----ESGYGGRSETEYERKPSYGRSEEQEEGY-RKPSYGRSEEQEE 225

Query: 213 GYES-GYGSKPEFESGYGRKPEY 234
           GY    YG   E E GY RKP Y
Sbjct: 226 GYRKPSYGRSEEQEEGY-RKPSY 247

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388519005|gb|AFK47564.1| unknown [Lotus japonicus]

 Score =  151 bits (381), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 125/258 (48%), Positives = 146/258 (56%), Gaps = 73/258 (28%)

Query: 19  PTPYDGGYDITLTYGRPLPPSDETCYPSSSASDGDFDYARPKFSSHSEPSAYADEALNNE 78
           PTPY GGYDI LTYGRP+PPSDETCYP    SD  FDY RP++SSH+EPSAYA+EAL+ E
Sbjct: 22  PTPYGGGYDINLTYGRPIPPSDETCYP-IGGSDESFDYDRPQYSSHAEPSAYANEALDVE 80

Query: 79  YSSYARPKPRPGFVPGSGGGSGYGGRPQPQPAYGFQPGMGRPEPYGSGRPESEYASGYAK 138
           YSSY+RPKPRP   P S                 F PG          RP SEY SGY +
Sbjct: 81  YSSYSRPKPRP--APAS-----------------FNPGY--------DRPSSEYESGYGR 113

Query: 139 RPDSQ----EYGSGYG------------------KRPESEEYGSGYGRKPDSESGE-SGF 175
           +P+S+    EYGSGYG                  ++ ES EYGSGYGRK +SES   SG+
Sbjct: 114 KPESEYSGLEYGSGYGRKQEHQVTGSEYGSGYGGRKQESSEYGSGYGRKQESESEYGSGY 173

Query: 176 GGRTESEYGGSAYGRKPEYES---GYGQKPEYES--------------GYGGKPGYESGY 218
             + E E   S YGRK EYE+   GYG++ E                 GYG K  YE+G 
Sbjct: 174 EQKQEYEAPESGYGRKQEYEAPEPGYGRRTEGSGYGGGYGGRSEEENPGYGRKTEYETG- 232

Query: 219 GSKPEFESGY--GRKPEY 234
           GS  E+ESGY  GRKP Y
Sbjct: 233 GS--EYESGYGGGRKPSY 248

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	369
TAIR|locus:2094682	294	AT3G29075 "AT3G29075" [Arabido	0.352	0.442	0.404	8.3e-19
MGI|MGI:1330280	159	Krtap6-2 "keratin associated p	0.298	0.691	0.451	2.3e-10
UNIPROTKB|F1PBJ4	517	FUS "Uncharacterized protein"	0.539	0.384	0.315	3.7e-10
UNIPROTKB|P35637	526	FUS "RNA-binding protein FUS"	0.539	0.378	0.291	1.1e-09
UNIPROTKB|H3BPE7	527	FUS "RNA-binding protein FUS"	0.539	0.377	0.291	1.1e-09
UNIPROTKB|G8ENL4	517	FUS "Uncharacterized protein"	0.376	0.268	0.317	2.3e-09
UNIPROTKB|Q28009	513	FUS "RNA-binding protein FUS"	0.563	0.405	0.299	3e-09
MGI|MGI:1353633	518	Fus "fused in sarcoma" [Mus mu	0.490	0.349	0.299	2.5e-08
RGD|1308864	518	Fus "fused in sarcoma" [Rattus	0.490	0.349	0.299	2.5e-08
DICTYBASE|DDB_G0292870	570	pex13 "peroxin 13" [Dictyostel	0.276	0.178	0.414	2.9e-08

TAIR|locus:2094682 AT3G29075 "AT3G29075" [Arabidopsis thaliana (taxid:3702)]

 Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
 Identities = 59/146 (40%), Positives = 72/146 (49%)

Query:    28 ITLTYGRPLPPSDETCYPSSSASDGDFDYARPKFSSHSEPSAYADEALNNEYSSYARPKX 87
             IT+TYGR +PPSDETCYP SS S   F+Y RP FSS+ + SAY D+AL  EYSSYARP  
Sbjct:    28 ITVTYGRSIPPSDETCYPLSSLSGDAFEYQRPNFSSNHDSSAYDDQALKTEYSSYARP-- 85

Query:    88 XXXXXXXXXXXXXXXXXXXXXXAYGFQPGMGRPE-PYGSGRPESEYASGYAKRPDSQEYG 146
                                    YG     GR E  YG  + ESE+ SGY  R +S    
Sbjct:    86 -------GPVGSGSDFGRKPNSGYG-----GRTEVEYGR-KTESEHGSGYGGRIESDYVK 132

Query:   147 SGYGKRPESEEYGSGYGRKPDSESGE 172
               YG   +  + G       D + G+
Sbjct:   133 PSYGGHEDDGDDGHKKHSGKDYDDGD 158

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

MGI|MGI:1330280 Krtap6-2 "keratin associated protein 6-2" [Mus musculus (taxid:10090)]

 Score = 151 (58.2 bits), Expect = 2.3e-10, P = 2.3e-10
 Identities = 61/135 (45%), Positives = 63/135 (46%)

Query:   111 YGFQPGMGRPEPYGSGRPESEYASGYAKRPDSQEYGSGYGKRPESEEYGSGYGRKPDSES 170
             YG   G G    YGSG     Y SGY     S  YG GYG       YGSGYG    S  
Sbjct:     6 YGNSCGYGCG--YGSG-----YGSGYGCGSGSG-YGCGYGSGYGCG-YGSGYGCGSGSGY 56

Query:   171 G---ESGFGGRTESEYG---GSAYGRKPEYESGYGQKPEYESGYGGKPGYESGYGSKPEF 224
             G    SG+G    S YG   GS YG    Y SGYG    Y SGYG   GY SGYG    +
Sbjct:    57 GCGYGSGYGCGYGSGYGCGYGSGYGCG--YGSGYGCG--YGSGYGC--GYGSGYGCG--Y 108

Query:   225 ESGYGRKPEYESGYG 239
              SGYG    Y SGYG
Sbjct:   109 GSGYGCG--YGSGYG 121

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005882 "intermediate filament" evidence=IEA

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|F1PBJ4 FUS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 171 (65.3 bits), Expect = 3.7e-10, P = 3.7e-10
 Identities = 70/222 (31%), Positives = 90/222 (40%)

Query:   110 AYGFQPGMGRPEPYGSGRPESEYASGYAKRPDSQEYG-SGYGKRPESEEYGSGYGRKPDS 168
             AY  QPG G  +       +  Y SGY +  D+  YG S YG     +   +GYG +  +
Sbjct:    16 AYPTQPGQGYSQQSNQPYGQQSY-SGYGQSADTSGYGQSSYGSS-YGQTQNTGYGTQ-ST 72

Query:   169 ESGESGFGGRTESEYGGSAYGRKPEYESGYGQKPEYESGYG--GKPGYESGYGSKPEFES 226
               G    GG   S+   S+YG++  Y  GYGQ+P   S  G  G     SGYG +P+   
Sbjct:    73 PQGYGSTGGYGSSQGSQSSYGQQSSYP-GYGQQPAPSSTSGSYGSGSQSSGYG-QPQ-SG 129

Query:   227 GYGRKPEYESGYGISMMIGPAMGVSPMNLAMGVNPIMSPGMAA--NRSMNLGMGVSQSMN 284
             GYG+    +SGY      G   G      +   NP    G     N S   G G     N
Sbjct:   130 GYGQ----QSGYS-----GQQQGYGQQQSSY--NPPQGYGQQNQYNSSSGGGGGGGGGGN 178

Query:   285 PGMVASRSTSRGMGGNLNLNTKAGTAVVRSMENLRGSRVMGG 326
              G   S S S G GG  N +   G       +  RG R  GG
Sbjct:   179 YGQDQS-SMSGGGGGYGNQDQSGGGGGYGGGQQDRGGRGRGG 219

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|P35637 FUS "RNA-binding protein FUS" [Homo sapiens (taxid:9606)]

 Score = 167 (63.8 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 65/223 (29%), Positives = 88/223 (39%)

Query:   110 AYGFQPGMGRPEPYGSGRPESEYASGYAKRPDSQEYG-SGYGKRPESEEYGSGYGRKPDS 168
             AY  QPG G  +       +  Y SGY++  D+  YG S Y    +S+  G G    P  
Sbjct:    16 AYPTQPGQGYSQQSSQPYGQQSY-SGYSQSTDTSGYGQSSYSSYGQSQNTGYGTQSTPQG 74

Query:   169 ESGESGFGGRTESEYGGSAYGRKPEYESGYGQKPEYESGYG--GKPGYESGYGSKPEFES 226
                  G+G    S+   S+YG++  Y  GYGQ+P   S  G  G     S YG +P+  S
Sbjct:    75 YGSTGGYGSSQSSQ---SSYGQQSSYP-GYGQQPAPSSTSGSYGSSSQSSSYG-QPQSGS 129

Query:   227 GYGRKPEY---ESGYGISMMIGPAMGVSPMNLAMGVNPIMSPGMAANRSMNLGMGVSQSM 283
              Y ++P Y   +  YG      P  G    N     N     G       N G   S SM
Sbjct:   130 -YSQQPSYGGQQQSYGQQQSYNPPQGYGQQNQ---YNSSSGGGGGGGGGGNYGQDQS-SM 184

Query:   284 NPGMVASRSTSRGMGGNLNLNTKAGTAVVRSMENLRGSRVMGG 326
             + G       S G  GN + +   G+      +  RG R  GG
Sbjct:   185 SSG-----GGSGGGYGNQDQSGGGGSGGYGQQD--RGGRGRGG 220

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0003723 "RNA binding" evidence=IEA

GO:0008219 "cell death" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0000398 "mRNA splicing, via spliceosome" evidence=TAS

GO:0005654 "nucleoplasm" evidence=TAS

GO:0008380 "RNA splicing" evidence=TAS

GO:0010467 "gene expression" evidence=TAS

GO:0005730 "nucleolus" evidence=IDA

UNIPROTKB|H3BPE7 FUS "RNA-binding protein FUS" [Homo sapiens (taxid:9606)]

 Score = 167 (63.8 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 65/223 (29%), Positives = 88/223 (39%)

Query:   110 AYGFQPGMGRPEPYGSGRPESEYASGYAKRPDSQEYG-SGYGKRPESEEYGSGYGRKPDS 168
             AY  QPG G  +       +  Y SGY++  D+  YG S Y    +S+  G G    P  
Sbjct:    16 AYPTQPGQGYSQQSSQPYGQQSY-SGYSQSTDTSGYGQSSYSSYGQSQNTGYGTQSTPQG 74

Query:   169 ESGESGFGGRTESEYGGSAYGRKPEYESGYGQKPEYESGYG--GKPGYESGYGSKPEFES 226
                  G+G    S+   S+YG++  Y  GYGQ+P   S  G  G     S YG +P+  S
Sbjct:    75 YGSTGGYGSSQSSQ---SSYGQQSSYP-GYGQQPAPSSTSGSYGSSSQSSSYG-QPQSGS 129

Query:   227 GYGRKPEY---ESGYGISMMIGPAMGVSPMNLAMGVNPIMSPGMAANRSMNLGMGVSQSM 283
              Y ++P Y   +  YG      P  G    N     N     G       N G   S SM
Sbjct:   130 -YSQQPSYGGQQQSYGQQQSYNPPQGYGQQNQ---YNSSSGGGGGGGGGGNYGQDQS-SM 184

Query:   284 NPGMVASRSTSRGMGGNLNLNTKAGTAVVRSMENLRGSRVMGG 326
             + G       S G  GN + +   G+      +  RG R  GG
Sbjct:   185 SSG-----GGSGGGYGNQDQSGGGGSGGYGQQD--RGGRGRGG 220

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|G8ENL4 FUS "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 164 (62.8 bits), Expect = 2.3e-09, P = 2.3e-09
 Identities = 48/151 (31%), Positives = 66/151 (43%)

Query:   110 AYGFQPGMGRPEPYGSGRPESEYASGYAKRPDSQEYG-SGYGKRPESEEYGSGYGRKPDS 168
             AY  QPG G  +       +  Y SGY +  D+  YG S YG     +   +GYG +  +
Sbjct:    16 AYPTQPGQGYSQQSNQPYGQQSY-SGYGQSADTSGYGQSSYGSS-YGQTQNTGYGAQ-SA 72

Query:   169 ESGESGFGGRTESEYGGSAYGRKPEYESGYGQKPEYESGYG--GKPGYESGYGSKPEFES 226
               G    GG    +   S+YG++  Y  GYGQ+P   S  G  G     SGYG +P+   
Sbjct:    73 PQGYGSTGGYGSGQGSQSSYGQQSSYP-GYGQQPAPSSTSGSYGTSSQSSGYG-QPQ-SG 129

Query:   227 GYGRKPEY---ESGYGISMMIGPAMGVSPMN 254
             GYG++  Y   +  YG      P  G    N
Sbjct:   130 GYGQQSGYGGQQQSYGQQQSYNPPQGYGQQN 160

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q28009 FUS "RNA-binding protein FUS" [Bos taurus (taxid:9913)]

 Score = 163 (62.4 bits), Expect = 3.0e-09, P = 3.0e-09
 Identities = 71/237 (29%), Positives = 97/237 (40%)

Query:   110 AYGFQPGMGRPEPYGSGRPESEYASGYAKRPDSQEYGSGYGKRPESEEYG----SGYGRK 165
             AY  QPG G  +       +  Y  GY +  D+    SGYG+   S  YG    +GY  +
Sbjct:    16 AYPTQPGQGYSQQSNQPYGQQSYG-GYGQSTDT----SGYGQSSYSGSYGQTQNTGYSTQ 70

Query:   166 PDSESGESGFGGRTESEYGGSAYGRKPEYESGYGQKPEYE--SGYGGKPGYESGYGSKPE 223
               +  G S  GG   S+   S+YG++  Y  GYGQ+P     SG  G     SGYG +P+
Sbjct:    71 -SAPQGYSSAGGYGSSQSSQSSYGQQSSYP-GYGQQPAPSGTSGSYGSSSQSSGYG-QPQ 127

Query:   224 FESGYGRKPEY---ESGYGISMMIGPAMGV---SPMNLAMGVNPIMSPGMAANR-SMNLG 276
                GYG++  Y   +  YG      P  G    S  N + G           ++ SM+ G
Sbjct:   128 -GGGYGQQSGYGGQQQSYGQQQSYNPPQGYGQQSQYNSSGGGGGGGGGSYGQDQPSMSSG 186

Query:   277 MGV----SQSMNPGMVASRST--SRGMGGNLNLNTKAGTAVVRSMENLRGSRV-MGG 326
              G     +Q  + G    +     RG GG    N  +G    R     RG R  MGG
Sbjct:   187 GGGGGYGNQDQSGGYGGGQQDRGGRGRGGGGGYNRSSGGYEPRGRGGGRGGRGGMGG 243

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0003723 "RNA binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

MGI|MGI:1353633 Fus "fused in sarcoma" [Mus musculus (taxid:10090)]

 Score = 155 (59.6 bits), Expect = 2.5e-08, P = 2.5e-08
 Identities = 61/204 (29%), Positives = 83/204 (40%)

Query:   110 AYGFQPGMGRPEPYGSGRPESEYASGYAKRPDSQEYG-SGYGKRPESEEYGSGYGRKPDS 168
             AY  QPG G  +       +  Y SGY +  D+  YG S YG     +   +GYG +  +
Sbjct:    16 AYPTQPGQGYSQQSSQPYGQQSY-SGYGQSADTSGYGQSSYGSS-YGQTQNTGYGTQ-SA 72

Query:   169 ESGESGFGGRTESEYGGSAYGRKPEYESGYGQKPEYES---GYGGKPGYESGYGSKPEFE 225
               G    GG   S+   S+YG++  Y  GYGQ+P   S    YGG     S YG +P+  
Sbjct:    73 PQGYGSTGGYGSSQSSQSSYGQQSSYP-GYGQQPAPSSTSGSYGGS-SQSSSYG-QPQ-S 128

Query:   226 SGYGRKPEYESGYGISMMIGPAMGVSPMNLAMGVNPIMSPGMAAN-RSMNLGMGVSQSMN 284
              GYG+    +SGYG     G          +   NP    G      S + G G     N
Sbjct:   129 GGYGQ----QSGYG-----GQQQSYGQQQSSY--NPPQGYGQQNQYNSSSGGGGGGGGGN 177

Query:   285 PGMVASRSTSRGMGGNLNLNTKAG 308
              G   S  +  G GG      ++G
Sbjct:   178 YGQDQSSMSGGGGGGGYGNQDQSG 201

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0003723 "RNA binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

RGD|1308864 Fus "fused in sarcoma" [Rattus norvegicus (taxid:10116)]

 Score = 155 (59.6 bits), Expect = 2.5e-08, P = 2.5e-08
 Identities = 61/204 (29%), Positives = 83/204 (40%)

Query:   110 AYGFQPGMGRPEPYGSGRPESEYASGYAKRPDSQEYG-SGYGKRPESEEYGSGYGRKPDS 168
             AY  QPG G  +       +  Y SGY +  D+  YG S YG     +   +GYG +  +
Sbjct:    16 AYPTQPGQGYSQQSNQPYGQQSY-SGYGQSADTSGYGQSSYGSS-YGQTQNTGYGTQ-SA 72

Query:   169 ESGESGFGGRTESEYGGSAYGRKPEYESGYGQKPEYES---GYGGKPGYESGYGSKPEFE 225
               G    GG   S+   S+YG++  Y  GYGQ+P   S    YGG     S YG +P+  
Sbjct:    73 PQGYGSTGGYGSSQSSQSSYGQQSSYP-GYGQQPAPSSTSGSYGGS-SQSSSYG-QPQ-S 128

Query:   226 SGYGRKPEYESGYGISMMIGPAMGVSPMNLAMGVNPIMSPGMAAN-RSMNLGMGVSQSMN 284
              GYG+    +SGYG     G          +   NP    G      S + G G     N
Sbjct:   129 GGYGQ----QSGYG-----GQQQSYGQQQSSY--NPPQGYGQQNQYNSSSGGGGGGGGGN 177

Query:   285 PGMVASRSTSRGMGGNLNLNTKAG 308
              G   S  +  G GG      ++G
Sbjct:   178 YGQDQSSMSGGGGGGGYGNQDQSG 201

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0005737 "cytoplasm" evidence=IEA;ISO

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005730 "nucleolus" evidence=ISO

DICTYBASE|DDB_G0292870 pex13 "peroxin 13" [Dictyostelium discoideum (taxid:44689)]

 Score = 155 (59.6 bits), Expect = 2.9e-08, P = 2.9e-08
 Identities = 51/123 (41%), Positives = 53/123 (43%)

Query:   124 GSGRPESEYASGYAKRPDSQEYGSGYGKRPESEEYGSGYGRKPDSESGES--GFGGRTES 181
             GS    S Y  GY    DS   G GYG    S  YGS YG       G S  G GG +  
Sbjct:    97 GSSGYRSSYGGGYR---DSYSSG-GYG----SSGYGSSYGSGGSGGYGSSLYGGGGYSSG 148

Query:   182 EYGGSAYGRKPEYESGYGQKPEYESGYG---GKPGYESGYGSK--PEFESGYGRKPEYES 236
              YGGS YG    Y  GYG    Y SGYG   G  GY S YG      +  GYG    Y  
Sbjct:   149 GYGGSGYGSS--YGGGYGSS--YGSGYGSSYGGSGYGSSYGGGYGSSYGGGYGGG--YGG 202

Query:   237 GYG 239
             GYG
Sbjct:   203 GYG 205

GO:0016560 "protein import into peroxisome matrix, docking" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0005777 "peroxisome" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0005779 "integral to peroxisomal membrane" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0005778 "peroxisomal membrane" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00