Citrus Sinensis ID: 017605
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 369 | ||||||
| 359476646 | 402 | PREDICTED: UPF0183 protein At3g51130-lik | 1.0 | 0.917 | 0.867 | 0.0 | |
| 297735048 | 389 | unnamed protein product [Vitis vinifera] | 1.0 | 0.948 | 0.867 | 0.0 | |
| 356538264 | 403 | PREDICTED: UPF0183 protein At3g51130-lik | 1.0 | 0.915 | 0.840 | 0.0 | |
| 449434186 | 398 | PREDICTED: UPF0183 protein At3g51130-lik | 0.989 | 0.917 | 0.842 | 0.0 | |
| 224134150 | 401 | predicted protein [Populus trichocarpa] | 0.972 | 0.895 | 0.853 | 0.0 | |
| 449491389 | 398 | PREDICTED: UPF0183 protein At3g51130-lik | 0.989 | 0.917 | 0.842 | 0.0 | |
| 357483667 | 404 | hypothetical protein MTR_5g021520 [Medic | 1.0 | 0.913 | 0.835 | 0.0 | |
| 356496677 | 400 | PREDICTED: UPF0183 protein At3g51130-lik | 0.991 | 0.915 | 0.837 | 0.0 | |
| 224094913 | 398 | predicted protein [Populus trichocarpa] | 0.967 | 0.896 | 0.845 | 0.0 | |
| 388499418 | 404 | unknown [Medicago truncatula] | 1.0 | 0.913 | 0.827 | 0.0 |
| >gi|359476646|ref|XP_003631875.1| PREDICTED: UPF0183 protein At3g51130-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/369 (86%), Positives = 340/369 (92%)
Query: 1 MPICEAFASIEQQPNIYDVVHVKYFDEEPLKLDIIISFPDHGFHLRFDPWSQRLRLIEIF 60
MPI +AFA IEQQPNIYDVVHVKYFDEEPLKLDI+ISFPDHGFHLRFDPWSQRLRLIEIF
Sbjct: 34 MPISKAFAQIEQQPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIF 93
Query: 61 DIKRLQMRYATSLIGGSSTLATFVAVYALFGPTFPGVYDKERSVYMLFYPGLSFAFPIPA 120
D+KRLQMRYATSLIGG STLATFVAVYALFGPTFPG YDK+R VY LFYPGLSFAFPIP
Sbjct: 94 DVKRLQMRYATSLIGGPSTLATFVAVYALFGPTFPGSYDKDRGVYTLFYPGLSFAFPIPT 153
Query: 121 QYADCCQDREAELPLEFPDGTTPVTCRVSIYDGSADKKVGVGSLFDKAIAPSLPVGSLYI 180
QY DCC D EAELPLEFPDGTTPVTCRVSIYD S D KVGVGS +KA AP LP GSLY+
Sbjct: 154 QYTDCCHDGEAELPLEFPDGTTPVTCRVSIYDSSTDSKVGVGSSMEKASAPPLPAGSLYM 213
Query: 181 EEVHAKLGEELHFTVGSQHIPFGASPQDVWTELGRPCGIHQKQVDQMVIHSASDPRPRST 240
EEVH KLGEEL FTVG QHIPFGASPQDVWTELGRPCGIHQKQVDQMVIHSASDPRPR+T
Sbjct: 214 EEVHVKLGEELRFTVGGQHIPFGASPQDVWTELGRPCGIHQKQVDQMVIHSASDPRPRTT 273
Query: 241 LCGDYFYNYYTRGLDILFDGQTHKIKKFIMHTNYPGHADFNSYIKCNFIILGSDFAGTSA 300
LCGDYFYNY+ RGLDILFDGQTHKIKKF++HTNYPGHADFNSY+KCNF+I GSDF G+
Sbjct: 274 LCGDYFYNYFDRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYMKCNFVIYGSDFGGSFQ 333
Query: 301 EVHSYKNKITPNTKWEQVKEILGDCGRAAIQTQGSTSNPFGSTFVYGYQNIAFEVMKNGY 360
EV K++ITP+TKWEQVKEILGDCGRAAIQTQGST+NPFGSTFVYGYQN+AFEVMKNGY
Sbjct: 334 EVKMSKHRITPSTKWEQVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEVMKNGY 393
Query: 361 ISTVTMFQS 369
I+TVT+FQS
Sbjct: 394 IATVTLFQS 402
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297735048|emb|CBI17410.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356538264|ref|XP_003537624.1| PREDICTED: UPF0183 protein At3g51130-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|449434186|ref|XP_004134877.1| PREDICTED: UPF0183 protein At3g51130-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|224134150|ref|XP_002327768.1| predicted protein [Populus trichocarpa] gi|222836853|gb|EEE75246.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|449491389|ref|XP_004158881.1| PREDICTED: UPF0183 protein At3g51130-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|357483667|ref|XP_003612120.1| hypothetical protein MTR_5g021520 [Medicago truncatula] gi|355513455|gb|AES95078.1| hypothetical protein MTR_5g021520 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|356496677|ref|XP_003517192.1| PREDICTED: UPF0183 protein At3g51130-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|224094913|ref|XP_002310289.1| predicted protein [Populus trichocarpa] gi|222853192|gb|EEE90739.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|388499418|gb|AFK37775.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 369 | ||||||
| TAIR|locus:2080873 | 410 | AT3G51130 [Arabidopsis thalian | 0.989 | 0.890 | 0.813 | 2.1e-173 | |
| DICTYBASE|DDB_G0271880 | 519 | DDB_G0271880 "UPF0183 family p | 0.628 | 0.447 | 0.375 | 3.8e-56 | |
| FB|FBgn0035877 | 438 | CG7083 [Drosophila melanogaste | 0.989 | 0.833 | 0.370 | 1.8e-55 | |
| RGD|621098 | 422 | RGD621098 "similar to RIKEN cD | 0.433 | 0.379 | 0.439 | 6.1e-54 | |
| UNIPROTKB|Q9BSU1 | 422 | C16orf70 "UPF0183 protein C16o | 0.460 | 0.402 | 0.423 | 2.6e-53 | |
| MGI|MGI:2443049 | 422 | D230025D16Rik "RIKEN cDNA D230 | 0.433 | 0.379 | 0.439 | 1.1e-52 | |
| WB|WBGene00011344 | 422 | T01G9.2a [Caenorhabditis elega | 0.425 | 0.372 | 0.352 | 7.4e-40 | |
| UNIPROTKB|P34692 | 422 | T01G9.2 "UPF0183 protein T01G9 | 0.425 | 0.372 | 0.352 | 7.4e-40 | |
| ASPGD|ASPL0000038147 | 516 | AN10404 [Emericella nidulans ( | 0.295 | 0.211 | 0.312 | 8.9e-16 | |
| UNIPROTKB|G4MWK3 | 526 | MGG_01174 "Uncharacterized pro | 0.428 | 0.300 | 0.266 | 1.1e-14 |
| TAIR|locus:2080873 AT3G51130 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1685 (598.2 bits), Expect = 2.1e-173, P = 2.1e-173
Identities = 301/370 (81%), Positives = 337/370 (91%)
Query: 1 MPICEAFASIEQQPNIYDVVHVKYFDEEPLKLDIIISFPDHGFHLRFDPWSQRLRLIEIF 60
MPICEAFA IEQQPNIYDVVHVKY+DE+PLKLD++ISFPDHGFHLRFDPWSQRLRL+EIF
Sbjct: 45 MPICEAFAQIEQQPNIYDVVHVKYYDEDPLKLDVVISFPDHGFHLRFDPWSQRLRLVEIF 104
Query: 61 DIKRLQMRYATSLIGGSSTLATFVAVYALFGPTFPGVYDKERSVYMLFYPGLSFAFPIPA 120
D+KRLQMRYATS+IGG STLATFVAVYALFGPTFPG+YDKER +Y LFYPGLSF FPIP
Sbjct: 105 DVKRLQMRYATSMIGGPSTLATFVAVYALFGPTFPGIYDKERGIYSLFYPGLSFEFPIPN 164
Query: 121 QYADCCQDREAELPLEFPDGTTPVTCRVSIYDGSADKKVGVGSLFDKAIAPSLPVGSLYI 180
QY DCC D EA LPLEFPDGTTPVTCRVSIYD S+DKKVGVG L D+A P LP GSLY+
Sbjct: 165 QYTDCCHDGEAALPLEFPDGTTPVTCRVSIYDNSSDKKVGVGKLMDRASVPPLPPGSLYM 224
Query: 181 EEVHAKLGEELHFTVGSQHIPFGASPQDVWTELGRPCGIHQKQVDQMVIHSASDPRPRST 240
EEVH K G+EL+FTVG QH+PFGASPQDVWTELGRPCGIH KQVDQMVIHSASDPRP++T
Sbjct: 225 EEVHVKPGKELYFTVGGQHMPFGASPQDVWTELGRPCGIHPKQVDQMVIHSASDPRPKTT 284
Query: 241 LCGDYFYNYYTRGLDILFDGQTHKIKKFIMHTNYPGHADFNSYIKCNFII-LGSDFAGTS 299
+CGDYFYNY+TRGLDILFDG+THK+KKF++HTNYPGHADFNSYIKCNF+I G+D +
Sbjct: 285 ICGDYFYNYFTRGLDILFDGETHKVKKFVLHTNYPGHADFNSYIKCNFVISAGAD----A 340
Query: 300 AEVHSYKNKITPNTKWEQVKEILGDCGRAAIQTQGSTSNPFGSTFVYGYQNIAFEVMKNG 359
AE + NKITP+T W+QVKEILG+CG AAIQTQGSTSNPFGST+VYGYQN+AFEVMKNG
Sbjct: 341 AEANRSGNKITPSTNWDQVKEILGECGPAAIQTQGSTSNPFGSTYVYGYQNVAFEVMKNG 400
Query: 360 YISTVTMFQS 369
+I+T+T+FQS
Sbjct: 401 HIATITLFQS 410
|
|
| DICTYBASE|DDB_G0271880 DDB_G0271880 "UPF0183 family protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0035877 CG7083 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| RGD|621098 RGD621098 "similar to RIKEN cDNA D230025D16Rik" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q9BSU1 C16orf70 "UPF0183 protein C16orf70" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| MGI|MGI:2443049 D230025D16Rik "RIKEN cDNA D230025D16 gene" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| WB|WBGene00011344 T01G9.2a [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P34692 T01G9.2 "UPF0183 protein T01G9.2" [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
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| ASPGD|ASPL0000038147 AN10404 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|G4MWK3 MGG_01174 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 369 | |||
| pfam03676 | 395 | pfam03676, UPF0183, Uncharacterized protein family | 0.0 |
| >gnl|CDD|217668 pfam03676, UPF0183, Uncharacterized protein family (UPF0183) | Back alignment and domain information |
|---|
Score = 524 bits (1352), Expect = 0.0
Identities = 182/397 (45%), Positives = 242/397 (60%), Gaps = 41/397 (10%)
Query: 1 MPICEAFASIEQQPNIYDVVHVKYFDEEPLKLDIIISFPDHGFHLRFDPWSQRLRLIEIF 60
MPI +A A I+QQP I V VKY D++PL +D++I+ P G LRFDP SQRL+LIE+F
Sbjct: 11 MPISQAIAIIQQQPRIIKNVQVKYSDKDPLSMDLVINLPQDGIRLRFDPVSQRLKLIEVF 70
Query: 61 DIKRLQMRYATSLIGGSSTLATFVAVYALFGPTFPGVYDKERSVYMLFYPGLSFAFPIPA 120
D+KR++++YA S L T VY FG T PGVYD +Y LF+ GLSF+FPI +
Sbjct: 71 DLKRVKLKYAGVYFNSPSVLPTIEQVYHSFGATHPGVYDASHQLYALFFRGLSFSFPIDS 130
Query: 121 QYADCCQDREAELPLEFPDGTTPVTCRVSIYDGSADKKVGVGSLFDKAIAPSLPV----G 176
+Y L+FPDG TPV R+SIYDGS +A P LP+ G
Sbjct: 131 KYTPGFGHGLGS--LKFPDGATPVVSRMSIYDGSN---------LAEAKVPPLPLSCYLG 179
Query: 177 SLYIEEVHA------KLGEELHFTVG--------------SQHIPFGASPQDVWTELGRP 216
+LY+E V LG +L ++HI FG S QDV + LG P
Sbjct: 180 NLYLESVEVLRDSGGTLGLKLQLVTEGGPGVALEPRVRTFTRHIYFGDSCQDVLSALGSP 239
Query: 217 CGIHQKQVDQMVIHSASDPRPRSTLCGDYFYNYYTRGLDILFDGQTHKIKKFIMHTNYPG 276
C + K D+M IHS SD R + C DYF+NY+T GLDILFD QTH++KKF++HTN+PG
Sbjct: 240 CKVFYKSEDKMKIHSPSDHRLVQSKCSDYFFNYFTLGLDILFDAQTHRVKKFVLHTNFPG 299
Query: 277 HADFNSYIKCNFII-LGSDFAGTSAEVHSYKNKITPNTKWEQVKEILGDCG-RAAIQTQG 334
H +FN Y +CNF+I L +D GT + + ITP +KW+QV EILG+ G R + +
Sbjct: 300 HYNFNMYHRCNFVIQLPADKDGTDS--PTDSPPITPYSKWDQVSEILGNSGERPVVLHRA 357
Query: 335 STS--NPFGSTFVYGYQNIAFEVMKNGYISTVTMFQS 369
S++ NPFGSTF YGYQ+I FEVM N +I++VT++ +
Sbjct: 358 SSTNTNPFGSTFCYGYQDIIFEVMPNNHIASVTLYGA 394
|
This family of proteins includes Lin-10 from C. elegans. Length = 395 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 369 | |||
| PF03676 | 394 | UPF0183: Uncharacterised protein family (UPF0183); | 100.0 | |
| KOG2819 | 413 | consensus Uncharacterized conserved protein [Funct | 100.0 |
| >PF03676 UPF0183: Uncharacterised protein family (UPF0183); InterPro: IPR005373 Members of this family are proteins of unknown function | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-125 Score=946.80 Aligned_cols=357 Identities=47% Similarity=0.862 Sum_probs=328.5
Q ss_pred CCHHHHHHHHhcCCcccceEEEEecCCCCCCcceEEEcCCCCeEEEecCCCCeEEEEEEeeCCcceEEEccccccCCCCc
Q 017605 1 MPICEAFASIEQQPNIYDVVHVKYFDEEPLKLDIIISFPDHGFHLRFDPWSQRLRLIEIFDIKRLQMRYATSLIGGSSTL 80 (369)
Q Consensus 1 M~l~~vl~~Lk~~~~~~~~v~v~Ys~~~Pl~~~ivi~l~~~GirL~Fd~~~QRL~lIEv~d~~~~~L~Y~~~~~~~p~~~ 80 (369)
|||||||++||+++++||+|||+||+++|+..||||+||++||||+|||++||||||||+||++++|+|++++|++|++.
T Consensus 11 ~~l~~vl~~lk~~~~~~~~v~~~Y~~~~P~~~~ivi~l~~~GirL~Fd~~~QrL~lIEv~d~~~i~L~Y~~~~~~~p~~~ 90 (394)
T PF03676_consen 11 MSLHQVLTILKSEPQTFPKVDLIYSDQDPLSSDIVINLPENGIRLRFDGPSQRLRLIEVYDFSKIKLRYKGSVFSSPEIG 90 (394)
T ss_pred CcHHHHHHHHHhccccCCceEEEECCCCCCcCCEEEEcCCCCeEEEECCCCcEEEEEEEecCccceEEeCcccccCcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeehhccCCCCCCcccCCCCEEEEeecceEEEeeCCccccccccccCCCcccccCCCCCcceeEEEEeeCCCCcccc
Q 017605 81 ATFVAVYALFGPTFPGVYDKERSVYMLFYPGLSFAFPIPAQYADCCQDREAELPLEFPDGTTPVTCRVSIYDGSADKKVG 160 (369)
Q Consensus 81 ~t~~~Iy~~FGPTyPG~y~~~~~~y~LsYpGlaF~F~i~~~~~~~~~~~~~~l~l~~~~~~~p~~~~m~I~~~~~d~~v~ 160 (369)
|||++||++|||||||+||+++++|+||||||||+||+++++++.+.++.+ +++|+++++|+++||+||
T Consensus 91 pTf~~Iy~~FGPTyPG~yd~~~~~YvLsYpGlaF~Fpi~~~~~~~~~~~~~--sl~~~~~ssp~~tsmaIf--------- 159 (394)
T PF03676_consen 91 PTFRHIYRLFGPTYPGEYDKSRGTYVLSYPGLAFSFPIPSKFQSSYSDGLD--SLEFPSGSSPVATSMAIF--------- 159 (394)
T ss_pred cchheeheccCCCCCCccCCCCCEEEEEECCEEEEeeCchhhcccccCCcc--eeecCCCCCcceeEEEEE---------
Confidence 999999999999999999999999999999999999999988888877753 889999999999999999
Q ss_pred cCCcccccCCCCCCC----CCeeEEEEEEEcCC------cEEEEecc--------------eEEEcCCCHHHHHHhcCCC
Q 017605 161 VGSLFDKAIAPSLPV----GSLYIEEVHAKLGE------ELHFTVGS--------------QHIPFGASPQDVWTELGRP 216 (369)
Q Consensus 161 ~G~s~~e~~~p~~~~----~~~~~e~v~v~~~~------~l~f~~~~--------------~~I~fG~T~QDVl~eLG~P 216 (369)
+|++|++++.|++|. +++|+++|+|...+ .|.|.... ++|+||+|||||++|||||
T Consensus 160 ~G~s~~ear~p~lp~~~~~~~~~~~~v~v~~~~~~~~~~~l~l~~~~g~~~~~~~~~~~~~~~I~fGdT~qdv~~~lG~P 239 (394)
T PF03676_consen 160 SGSSWAEARAPPLPLSCYCGNLYLESVEVLRDNKETVGLELSLVTEGGPGRIEEPRRSNFERWIRFGDTPQDVLSELGPP 239 (394)
T ss_pred cCCchhcccCCCccccccCCCcceeeEEeeccCCCCcCcEEEEEEcCCCcccccccccCceEEEEeCCCHHHHHHhhCCc
Confidence 999999999997764 89999999884432 44444332 7999999999999999999
Q ss_pred CccccccCCceeeccCCCCCCCCCCcCcceeeecccceeEEEeCCcceEEEEEeeeCCCCccCcCceeeeeeEEeccCCC
Q 017605 217 CGIHQKQVDQMVIHSASDPRPRSTLCGDYFYNYYTRGLDILFDGQTHKIKKFIMHTNYPGHADFNSYIKCNFIILGSDFA 296 (369)
Q Consensus 217 ~~if~K~ddrM~IH~~~~~~~~~~~~~dyFyNYF~lGlDiLfd~~t~~v~K~ILHtN~PG~~~Fn~Y~RC~w~I~~~~~~ 296 (369)
++||||+||||+||++++++...+..+|||||||+||||||||++||+|||||||||+||||+||+|+||||+|....++
T Consensus 240 ~~~~~k~~d~m~ih~~~~~~~~~~~~~~yf~nYf~~G~Dilfd~~~~~v~K~ILHtN~PG~~~Fn~y~rC~f~I~~~~~~ 319 (394)
T PF03676_consen 240 DRIFYKSDDRMSIHSPSSHKQVPSKPSDYFYNYFTLGLDILFDGNTHRVKKFILHTNIPGHYDFNRYNRCNFEIELSNDS 319 (394)
T ss_pred cceeecccccccccccccccCCccCCCCEEEeccccceEEEEeCCCceEEEEEEecCCCCCccccceeeeeeEEEecCcc
Confidence 99999999999999998888888889999999999999999999999999999999999999999999999999997643
Q ss_pred CCcccccccccccCCCCChhHhHhhhCCCC-CceEecCCCCC--CCCcceEEeeeCCeEEEEEcCCceEEEEEeeC
Q 017605 297 GTSAEVHSYKNKITPNTKWEQVKEILGDCG-RAAIQTQGSTS--NPFGSTFVYGYQNIAFEVMKNGYISTVTMFQS 369 (369)
Q Consensus 297 ~~~~~~~~~~~~it~~~~~~~i~~~l~~~~-~pvvlnR~~~~--npfGsT~lyG~~~iIfEV~~n~~IasVtlf~~ 369 (369)
... +.......|+++++|++|++.|+... |||||+|++++ ||||+|+||||+|||||||+||+|||||||+.
T Consensus 320 ~~~-~~~~~~~~i~~~~kwd~i~~~L~~~~~~pvvl~r~s~~n~npfGsT~~yG~~~~IfEVm~n~~IasVTly~~ 394 (394)
T PF03676_consen 320 NET-DSPTNSPMITPYTKWDDIQEILGKAEDRPVVLNRASSSNDNPFGSTFLYGYQGIIFEVMKNGHIASVTLYQA 394 (394)
T ss_pred ccc-ccccccceeeccCCHhHhHHhhcccccCCcccccccccCCCCCcceeEeCCCCEEEEEecCCcEEEEEEecC
Confidence 321 22223335999999999999997655 99999999886 99999999999999999999999999999974
|
|
| >KOG2819 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 369 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-06 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.7 bits (115), Expect = 2e-06
Identities = 68/416 (16%), Positives = 115/416 (27%), Gaps = 133/416 (31%)
Query: 5 EAFASIEQQPNIYDVVH---VKYFDEEPLKLDIIISF-----------PDHGFHLRFDPW 50
+ S + Q + + +K + L+++ DH +++
Sbjct: 169 DVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIH 228
Query: 51 SQRLRLIEIFDIKRLQMRYATSLI---------------GGSSTLAT--FVAVYALFGPT 93
S + L + Y L+ L T F V
Sbjct: 229 SIQAELRRLL----KSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAA 284
Query: 94 FPGVYDKERSVYMLFYPGLSFAFPIPAQYADCCQDREAELPLEFPDGTTPVTCRV---SI 150
+ M P + + +Y DC R +LP E P + SI
Sbjct: 285 TTTHISLD-HHSMTLTPDEVKS--LLLKYLDC---RPQDLPREVLTTN-PRRLSIIAESI 337
Query: 151 YDGSA----------DK-----KVGVGSL--------FDK-AIAPS---LPVGSLYI--- 180
DG A DK + + L FD+ ++ P +P L +
Sbjct: 338 RDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWF 397
Query: 181 ---EEVHAKLGEELH-----------FTVGSQHIPFGASPQDVWTELGRPC----GIHQK 222
+ + +LH T+ IP ++ EL +H+
Sbjct: 398 DVIKSDVMVVVNKLHKYSLVEKQPKESTI---SIP------SIYLELKVKLENEYALHRS 448
Query: 223 QVDQMVIHSASDPRPRSTLCGD-YFYNYYTRGLDILFDGQTHKIKKF------------- 268
VD I D D YFY++ L + ++ F
Sbjct: 449 IVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNI--EHPERMTLFRMVFLDFRFLEQK 506
Query: 269 IMHTNYPGHADFNSYIKCNFIILGSDFAGTSAEVHSYKNKITPN-TKWEQ-VKEIL 322
I H + +A T ++ YK I N K+E+ V IL
Sbjct: 507 IRHDSTAWNAS-------------GSILNTLQQLKFYKPYICDNDPKYERLVNAIL 549
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00