Citrus Sinensis ID: 017605


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------37
MPICEAFASIEQQPNIYDVVHVKYFDEEPLKLDIIISFPDHGFHLRFDPWSQRLRLIEIFDIKRLQMRYATSLIGGSSTLATFVAVYALFGPTFPGVYDKERSVYMLFYPGLSFAFPIPAQYADCCQDREAELPLEFPDGTTPVTCRVSIYDGSADKKVGVGSLFDKAIAPSLPVGSLYIEEVHAKLGEELHFTVGSQHIPFGASPQDVWTELGRPCGIHQKQVDQMVIHSASDPRPRSTLCGDYFYNYYTRGLDILFDGQTHKIKKFIMHTNYPGHADFNSYIKCNFIILGSDFAGTSAEVHSYKNKITPNTKWEQVKEILGDCGRAAIQTQGSTSNPFGSTFVYGYQNIAFEVMKNGYISTVTMFQS
ccHHHHHHHHHcccccccEEEEEEcccccccccEEEEcccccEEEEEcccccEEEEEEEEEccccEEEEccccccccccccHHHEEHHHccccccccccccccEEEEEEccEEEEEEcccccccccccccccccccccccccccEEEEEEEEccccccccccccccccccccccccccEEEEEEEccccEEEEEEccEEEEccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccEEEEEEccccEEEEEEEEcccccccccccEEEEEEEEEccccccccccccccccEEcccccHHHHHHHHccccccccccccccccccccEEEEEEcccEEEEEEcccEEEEEEEEc
ccHHHHHHHHHHccccccEEEEEEcccccccccEEEEcccccEEEEEcccccEEEEEEEEEccEEEEEEccEEcccccccccHHHHHHHccccccccccccccEEEEEcccEEEEEccccHccccccccccccccccccccccccEEEEEEcccccccccccccHHHccccccccccEEEEEccccccEEEEEEcccEEEEccccHHHHHHHHcccccEEEcccccEEEEccccccccccccccHEEHHHcccEEEEEEccccEEEEEEEEcccccccccccEEccEEEEEEcccccccccccccccEEcccccHHHHHHHHcccccccEEEcccccccccccEEEccccEEEEEEccccEEEEEEEcc
MPICEAfasieqqpniydvvhvkyfdeeplkldiiisfpdhgfhlrfdpwsqRLRLIEIFDIKRLQMRYATSLIGGSSTLATFVAVYALfgptfpgvydkerSVYMLfypglsfafpipaqyadccqdreaelplefpdgttpvtcrvsiydgsadkkvgvgslfdkaiapslpvgslYIEEVHAKLGEelhftvgsqhipfgaspqdvwtelgrpcgihqkqvDQMVIhsasdprprstlcgdyfynyytrgldilfdgQTHKIKKFImhtnypghadfnsyiKCNFIIlgsdfagtsaevhsyknkitpntkWEQVKEILGDCGRAaiqtqgstsnpfgstfvYGYQNIAFEVMKNGYISTVTMFQS
MPICEAFAsieqqpniyDVVHVKYFDEEPLKLDIIISFPDHGFHLRFDPWSQRLRLIEIFDIKRLQMRYATSLIGGSSTLATFVAVYALFGPTFPGVYDKERSVYMLFYPGLSFAFPIPAQYADCCQDREAELplefpdgttpVTCRVSIYDGSADKKVGVGSLFDKAIAPSLPVGSLYIEEVHAKLGEELHFTVGSQHIPFGASPQDVWTELGRPCGIHQKQVDQMVIHsasdprprstLCGDYFYNYYTRGLDILFDGQTHKIKKFIMHTNYPGHADFNSYIKCNFIILGSDFAGTSAEVHSYknkitpntkWEQVKEILGDCGRAAIQtqgstsnpfgSTFVYGYQNIAFEVMKNGYISTVTMFQS
MPICEAFASIEQQPNIYDVVHVKYFDEEPLKLDIIISFPDHGFHLRFDPWSQRLRLIEIFDIKRLQMRYATSLIGGSSTLATFVAVYALFGPTFPGVYDKERSVYMLFYPGLSFAFPIPAQYADCCQDREAELPLEFPDGTTPVTCRVSIYDGSADKKVGVGSLFDKAIAPSLPVGSLYIEEVHAKLGEELHFTVGSQHIPFGASPQDVWTELGRPCGIHQKQVDQMVIHSASDPRPRSTLCGDYFYNYYTRGLDILFDGQTHKIKKFIMHTNYPGHADFNSYIKCNFIILGSDFAGTSAEVHSYKNKITPNTKWEQVKEILGDCGRAAIQTQGSTSNPFGSTFVYGYQNIAFEVMKNGYISTVTMFQS
***CEAFASIEQQPNIYDVVHVKYFDEEPLKLDIIISFPDHGFHLRFDPWSQRLRLIEIFDIKRLQMRYATSLIGGSSTLATFVAVYALFGPTFPGVYDKERSVYMLFYPGLSFAFPIPAQYADCCQDREAELPLEFPDGTTPVTCRVSIYDGSADKKVGVGSLFDKAIAPSLPVGSLYIEEVHAKLGEELHFTVGSQHIPFGASPQDVWTELGRPCGIHQKQVDQMVIH********STLCGDYFYNYYTRGLDILFDGQTHKIKKFIMHTNYPGHADFNSYIKCNFIILGSDFAGTSAEVHSYKNKITPNTKWEQVKEILGDCGRAAIQTQGSTSNPFGSTFVYGYQNIAFEVMKNGYISTVTM***
MPICEAFASIEQQPNIYDVVHVKYFDEEPLKLDIIISFPDHGFHLRFDPWSQRLRLIEIFDIKRLQMRYAT*LIG**STLATFVAVYALFGPTFPGVYDKERSVYMLFYPGLSFAFPIPAQY*********************VTCRVSIYDG**DK******L****IA**LPVGSLYIEEVHAKLGEELHFTVGSQHIPFGASPQDVWTELGRPCGIHQKQVDQ******************YFYNYYTRGLDILFDGQTHKIKKFIMHTNYPGHADFNSYIKCNFIILG************************************************GSTFVYGYQNIAFEVMKNGYISTVTMFQS
MPICEAFASIEQQPNIYDVVHVKYFDEEPLKLDIIISFPDHGFHLRFDPWSQRLRLIEIFDIKRLQMRYATSLIGGSSTLATFVAVYALFGPTFPGVYDKERSVYMLFYPGLSFAFPIPAQYADCCQDREAELPLEFPDGTTPVTCRVSIYDGSADKKVGVGSLFDKAIAPSLPVGSLYIEEVHAKLGEELHFTVGSQHIPFGASPQDVWTELGRPCGIHQKQVDQMVIHSASDPRPRSTLCGDYFYNYYTRGLDILFDGQTHKIKKFIMHTNYPGHADFNSYIKCNFIILGSDFAGTSAEVHSYKNKITPNTKWEQVKEILGDCGRAAIQTQGSTSNPFGSTFVYGYQNIAFEVMKNGYISTVTMFQS
MPICEAFASIEQQPNIYDVVHVKYFDEEPLKLDIIISFPDHGFHLRFDPWSQRLRLIEIFDIKRLQMRYATSLIGGSSTLATFVAVYALFGPTFPGVYDKERSVYMLFYPGLSFAFPIPAQYADCCQDREAELPLEFPDGTTPVTCRVSIYDGSADKKVGVGSLFDKAIAPSLPVGSLYIEEVHAKLGEELHFTVGSQHIPFGASPQDVWTELGRPCGIHQKQVDQMVIHSASDPRP**TLCGDYFYNYYTRGLDILFDGQTHKIKKFIMHTNYPGHADFNSYIKCNFIILGSDF*********YKNKITPNTKWEQVKEILGDCGRAAIQTQGSTSNPFGSTFVYGYQNIAFEVMKNGYISTVTMFQS
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MPICEAFASIEQQPNIYDVVHVKYFDEEPLKLDIIISFPDHGFHLRFDPWSQRLRLIEIFDIKRLQMRYATSLIGGSSTLATFVAVYALFGPTFPGVYDKERSVYMLFYPGLSFAFPIPAQYADCCQDREAELPLEFPDGTTPVTCRVSIYDGSADKKVGVGSLFDKAIAPSLPVGSLYIEEVHAKLGEELHFTVGSQHIPFGASPQDVWTELGRPCGIHQKQVDQMVIHSASDPRPRSTLCGDYFYNYYTRGLDILFDGQTHKIKKFIMHTNYPGHADFNSYIKCNFIILGSDFAGTSAEVHSYKNKITPNTKWEQVKEILGDCGRAAIQTQGSTSNPFGSTFVYGYQNIAFEVMKNGYISTVTMFQS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query369 2.2.26 [Sep-21-2011]
Q9SD33410 UPF0183 protein At3g51130 yes no 0.989 0.890 0.813 0.0
Q9VSH9438 UPF0183 protein CG7083 OS yes no 0.959 0.808 0.362 2e-59
O08654422 UPF0183 protein C16orf70 yes no 0.924 0.808 0.333 2e-53
Q9BSU1422 UPF0183 protein C16orf70 yes no 0.932 0.815 0.328 6e-53
Q922R1422 UPF0183 protein C16orf70 yes no 0.948 0.829 0.333 2e-52
P34692422 UPF0183 protein T01G9.2 O yes no 0.953 0.834 0.299 3e-40
>sp|Q9SD33|U183_ARATH UPF0183 protein At3g51130 OS=Arabidopsis thaliana GN=At3g51130 PE=2 SV=2 Back     alignment and function desciption
 Score =  651 bits (1680), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 301/370 (81%), Positives = 337/370 (91%), Gaps = 5/370 (1%)

Query: 1   MPICEAFASIEQQPNIYDVVHVKYFDEEPLKLDIIISFPDHGFHLRFDPWSQRLRLIEIF 60
           MPICEAFA IEQQPNIYDVVHVKY+DE+PLKLD++ISFPDHGFHLRFDPWSQRLRL+EIF
Sbjct: 45  MPICEAFAQIEQQPNIYDVVHVKYYDEDPLKLDVVISFPDHGFHLRFDPWSQRLRLVEIF 104

Query: 61  DIKRLQMRYATSLIGGSSTLATFVAVYALFGPTFPGVYDKERSVYMLFYPGLSFAFPIPA 120
           D+KRLQMRYATS+IGG STLATFVAVYALFGPTFPG+YDKER +Y LFYPGLSF FPIP 
Sbjct: 105 DVKRLQMRYATSMIGGPSTLATFVAVYALFGPTFPGIYDKERGIYSLFYPGLSFEFPIPN 164

Query: 121 QYADCCQDREAELPLEFPDGTTPVTCRVSIYDGSADKKVGVGSLFDKAIAPSLPVGSLYI 180
           QY DCC D EA LPLEFPDGTTPVTCRVSIYD S+DKKVGVG L D+A  P LP GSLY+
Sbjct: 165 QYTDCCHDGEAALPLEFPDGTTPVTCRVSIYDNSSDKKVGVGKLMDRASVPPLPPGSLYM 224

Query: 181 EEVHAKLGEELHFTVGSQHIPFGASPQDVWTELGRPCGIHQKQVDQMVIHSASDPRPRST 240
           EEVH K G+EL+FTVG QH+PFGASPQDVWTELGRPCGIH KQVDQMVIHSASDPRP++T
Sbjct: 225 EEVHVKPGKELYFTVGGQHMPFGASPQDVWTELGRPCGIHPKQVDQMVIHSASDPRPKTT 284

Query: 241 LCGDYFYNYYTRGLDILFDGQTHKIKKFIMHTNYPGHADFNSYIKCNFII-LGSDFAGTS 299
           +CGDYFYNY+TRGLDILFDG+THK+KKF++HTNYPGHADFNSYIKCNF+I  G+D    +
Sbjct: 285 ICGDYFYNYFTRGLDILFDGETHKVKKFVLHTNYPGHADFNSYIKCNFVISAGAD----A 340

Query: 300 AEVHSYKNKITPNTKWEQVKEILGDCGRAAIQTQGSTSNPFGSTFVYGYQNIAFEVMKNG 359
           AE +   NKITP+T W+QVKEILG+CG AAIQTQGSTSNPFGST+VYGYQN+AFEVMKNG
Sbjct: 341 AEANRSGNKITPSTNWDQVKEILGECGPAAIQTQGSTSNPFGSTYVYGYQNVAFEVMKNG 400

Query: 360 YISTVTMFQS 369
           +I+T+T+FQS
Sbjct: 401 HIATITLFQS 410





Arabidopsis thaliana (taxid: 3702)
>sp|Q9VSH9|U183_DROME UPF0183 protein CG7083 OS=Drosophila melanogaster GN=CG7083 PE=2 SV=1 Back     alignment and function description
>sp|O08654|CP070_RAT UPF0183 protein C16orf70 homolog OS=Rattus norvegicus PE=2 SV=1 Back     alignment and function description
>sp|Q9BSU1|CP070_HUMAN UPF0183 protein C16orf70 OS=Homo sapiens GN=C16orf70 PE=1 SV=1 Back     alignment and function description
>sp|Q922R1|CP070_MOUSE UPF0183 protein C16orf70 homolog OS=Mus musculus PE=2 SV=2 Back     alignment and function description
>sp|P34692|U183_CAEEL UPF0183 protein T01G9.2 OS=Caenorhabditis elegans GN=T01G9.2 PE=1 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query369
359476646402 PREDICTED: UPF0183 protein At3g51130-lik 1.0 0.917 0.867 0.0
297735048389 unnamed protein product [Vitis vinifera] 1.0 0.948 0.867 0.0
356538264403 PREDICTED: UPF0183 protein At3g51130-lik 1.0 0.915 0.840 0.0
449434186398 PREDICTED: UPF0183 protein At3g51130-lik 0.989 0.917 0.842 0.0
224134150401 predicted protein [Populus trichocarpa] 0.972 0.895 0.853 0.0
449491389398 PREDICTED: UPF0183 protein At3g51130-lik 0.989 0.917 0.842 0.0
357483667404 hypothetical protein MTR_5g021520 [Medic 1.0 0.913 0.835 0.0
356496677400 PREDICTED: UPF0183 protein At3g51130-lik 0.991 0.915 0.837 0.0
224094913398 predicted protein [Populus trichocarpa] 0.967 0.896 0.845 0.0
388499418404 unknown [Medicago truncatula] 1.0 0.913 0.827 0.0
>gi|359476646|ref|XP_003631875.1| PREDICTED: UPF0183 protein At3g51130-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  683 bits (1762), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/369 (86%), Positives = 340/369 (92%)

Query: 1   MPICEAFASIEQQPNIYDVVHVKYFDEEPLKLDIIISFPDHGFHLRFDPWSQRLRLIEIF 60
           MPI +AFA IEQQPNIYDVVHVKYFDEEPLKLDI+ISFPDHGFHLRFDPWSQRLRLIEIF
Sbjct: 34  MPISKAFAQIEQQPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIF 93

Query: 61  DIKRLQMRYATSLIGGSSTLATFVAVYALFGPTFPGVYDKERSVYMLFYPGLSFAFPIPA 120
           D+KRLQMRYATSLIGG STLATFVAVYALFGPTFPG YDK+R VY LFYPGLSFAFPIP 
Sbjct: 94  DVKRLQMRYATSLIGGPSTLATFVAVYALFGPTFPGSYDKDRGVYTLFYPGLSFAFPIPT 153

Query: 121 QYADCCQDREAELPLEFPDGTTPVTCRVSIYDGSADKKVGVGSLFDKAIAPSLPVGSLYI 180
           QY DCC D EAELPLEFPDGTTPVTCRVSIYD S D KVGVGS  +KA AP LP GSLY+
Sbjct: 154 QYTDCCHDGEAELPLEFPDGTTPVTCRVSIYDSSTDSKVGVGSSMEKASAPPLPAGSLYM 213

Query: 181 EEVHAKLGEELHFTVGSQHIPFGASPQDVWTELGRPCGIHQKQVDQMVIHSASDPRPRST 240
           EEVH KLGEEL FTVG QHIPFGASPQDVWTELGRPCGIHQKQVDQMVIHSASDPRPR+T
Sbjct: 214 EEVHVKLGEELRFTVGGQHIPFGASPQDVWTELGRPCGIHQKQVDQMVIHSASDPRPRTT 273

Query: 241 LCGDYFYNYYTRGLDILFDGQTHKIKKFIMHTNYPGHADFNSYIKCNFIILGSDFAGTSA 300
           LCGDYFYNY+ RGLDILFDGQTHKIKKF++HTNYPGHADFNSY+KCNF+I GSDF G+  
Sbjct: 274 LCGDYFYNYFDRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYMKCNFVIYGSDFGGSFQ 333

Query: 301 EVHSYKNKITPNTKWEQVKEILGDCGRAAIQTQGSTSNPFGSTFVYGYQNIAFEVMKNGY 360
           EV   K++ITP+TKWEQVKEILGDCGRAAIQTQGST+NPFGSTFVYGYQN+AFEVMKNGY
Sbjct: 334 EVKMSKHRITPSTKWEQVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEVMKNGY 393

Query: 361 ISTVTMFQS 369
           I+TVT+FQS
Sbjct: 394 IATVTLFQS 402




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297735048|emb|CBI17410.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356538264|ref|XP_003537624.1| PREDICTED: UPF0183 protein At3g51130-like [Glycine max] Back     alignment and taxonomy information
>gi|449434186|ref|XP_004134877.1| PREDICTED: UPF0183 protein At3g51130-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224134150|ref|XP_002327768.1| predicted protein [Populus trichocarpa] gi|222836853|gb|EEE75246.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449491389|ref|XP_004158881.1| PREDICTED: UPF0183 protein At3g51130-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|357483667|ref|XP_003612120.1| hypothetical protein MTR_5g021520 [Medicago truncatula] gi|355513455|gb|AES95078.1| hypothetical protein MTR_5g021520 [Medicago truncatula] Back     alignment and taxonomy information
>gi|356496677|ref|XP_003517192.1| PREDICTED: UPF0183 protein At3g51130-like [Glycine max] Back     alignment and taxonomy information
>gi|224094913|ref|XP_002310289.1| predicted protein [Populus trichocarpa] gi|222853192|gb|EEE90739.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|388499418|gb|AFK37775.1| unknown [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query369
TAIR|locus:2080873410 AT3G51130 [Arabidopsis thalian 0.989 0.890 0.813 2.1e-173
DICTYBASE|DDB_G0271880 519 DDB_G0271880 "UPF0183 family p 0.628 0.447 0.375 3.8e-56
FB|FBgn0035877438 CG7083 [Drosophila melanogaste 0.989 0.833 0.370 1.8e-55
RGD|621098422 RGD621098 "similar to RIKEN cD 0.433 0.379 0.439 6.1e-54
UNIPROTKB|Q9BSU1422 C16orf70 "UPF0183 protein C16o 0.460 0.402 0.423 2.6e-53
MGI|MGI:2443049422 D230025D16Rik "RIKEN cDNA D230 0.433 0.379 0.439 1.1e-52
WB|WBGene00011344422 T01G9.2a [Caenorhabditis elega 0.425 0.372 0.352 7.4e-40
UNIPROTKB|P34692422 T01G9.2 "UPF0183 protein T01G9 0.425 0.372 0.352 7.4e-40
ASPGD|ASPL0000038147 516 AN10404 [Emericella nidulans ( 0.295 0.211 0.312 8.9e-16
UNIPROTKB|G4MWK3 526 MGG_01174 "Uncharacterized pro 0.428 0.300 0.266 1.1e-14
TAIR|locus:2080873 AT3G51130 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1685 (598.2 bits), Expect = 2.1e-173, P = 2.1e-173
 Identities = 301/370 (81%), Positives = 337/370 (91%)

Query:     1 MPICEAFASIEQQPNIYDVVHVKYFDEEPLKLDIIISFPDHGFHLRFDPWSQRLRLIEIF 60
             MPICEAFA IEQQPNIYDVVHVKY+DE+PLKLD++ISFPDHGFHLRFDPWSQRLRL+EIF
Sbjct:    45 MPICEAFAQIEQQPNIYDVVHVKYYDEDPLKLDVVISFPDHGFHLRFDPWSQRLRLVEIF 104

Query:    61 DIKRLQMRYATSLIGGSSTLATFVAVYALFGPTFPGVYDKERSVYMLFYPGLSFAFPIPA 120
             D+KRLQMRYATS+IGG STLATFVAVYALFGPTFPG+YDKER +Y LFYPGLSF FPIP 
Sbjct:   105 DVKRLQMRYATSMIGGPSTLATFVAVYALFGPTFPGIYDKERGIYSLFYPGLSFEFPIPN 164

Query:   121 QYADCCQDREAELPLEFPDGTTPVTCRVSIYDGSADKKVGVGSLFDKAIAPSLPVGSLYI 180
             QY DCC D EA LPLEFPDGTTPVTCRVSIYD S+DKKVGVG L D+A  P LP GSLY+
Sbjct:   165 QYTDCCHDGEAALPLEFPDGTTPVTCRVSIYDNSSDKKVGVGKLMDRASVPPLPPGSLYM 224

Query:   181 EEVHAKLGEELHFTVGSQHIPFGASPQDVWTELGRPCGIHQKQVDQMVIHSASDPRPRST 240
             EEVH K G+EL+FTVG QH+PFGASPQDVWTELGRPCGIH KQVDQMVIHSASDPRP++T
Sbjct:   225 EEVHVKPGKELYFTVGGQHMPFGASPQDVWTELGRPCGIHPKQVDQMVIHSASDPRPKTT 284

Query:   241 LCGDYFYNYYTRGLDILFDGQTHKIKKFIMHTNYPGHADFNSYIKCNFII-LGSDFAGTS 299
             +CGDYFYNY+TRGLDILFDG+THK+KKF++HTNYPGHADFNSYIKCNF+I  G+D    +
Sbjct:   285 ICGDYFYNYFTRGLDILFDGETHKVKKFVLHTNYPGHADFNSYIKCNFVISAGAD----A 340

Query:   300 AEVHSYKNKITPNTKWEQVKEILGDCGRAAIQTQGSTSNPFGSTFVYGYQNIAFEVMKNG 359
             AE +   NKITP+T W+QVKEILG+CG AAIQTQGSTSNPFGST+VYGYQN+AFEVMKNG
Sbjct:   341 AEANRSGNKITPSTNWDQVKEILGECGPAAIQTQGSTSNPFGSTYVYGYQNVAFEVMKNG 400

Query:   360 YISTVTMFQS 369
             +I+T+T+FQS
Sbjct:   401 HIATITLFQS 410




GO:0005739 "mitochondrion" evidence=ISM
GO:0006914 "autophagy" evidence=RCA
GO:0009610 "response to symbiotic fungus" evidence=RCA
GO:0009627 "systemic acquired resistance" evidence=RCA
GO:0009697 "salicylic acid biosynthetic process" evidence=RCA
GO:0010200 "response to chitin" evidence=RCA
DICTYBASE|DDB_G0271880 DDB_G0271880 "UPF0183 family protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
FB|FBgn0035877 CG7083 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
RGD|621098 RGD621098 "similar to RIKEN cDNA D230025D16Rik" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q9BSU1 C16orf70 "UPF0183 protein C16orf70" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:2443049 D230025D16Rik "RIKEN cDNA D230025D16 gene" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
WB|WBGene00011344 T01G9.2a [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|P34692 T01G9.2 "UPF0183 protein T01G9.2" [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
ASPGD|ASPL0000038147 AN10404 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|G4MWK3 MGG_01174 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9VSH9U183_DROMENo assigned EC number0.36270.95930.8082yesno
Q922R1CP070_MOUSENo assigned EC number0.33330.94850.8293yesno
Q9BSU1CP070_HUMANNo assigned EC number0.32840.93220.8151yesno
Q9SD33U183_ARATHNo assigned EC number0.81350.98910.8902yesno
O08654CP070_RATNo assigned EC number0.33330.92410.8080yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query369
pfam03676395 pfam03676, UPF0183, Uncharacterized protein family 0.0
>gnl|CDD|217668 pfam03676, UPF0183, Uncharacterized protein family (UPF0183) Back     alignment and domain information
 Score =  524 bits (1352), Expect = 0.0
 Identities = 182/397 (45%), Positives = 242/397 (60%), Gaps = 41/397 (10%)

Query: 1   MPICEAFASIEQQPNIYDVVHVKYFDEEPLKLDIIISFPDHGFHLRFDPWSQRLRLIEIF 60
           MPI +A A I+QQP I   V VKY D++PL +D++I+ P  G  LRFDP SQRL+LIE+F
Sbjct: 11  MPISQAIAIIQQQPRIIKNVQVKYSDKDPLSMDLVINLPQDGIRLRFDPVSQRLKLIEVF 70

Query: 61  DIKRLQMRYATSLIGGSSTLATFVAVYALFGPTFPGVYDKERSVYMLFYPGLSFAFPIPA 120
           D+KR++++YA       S L T   VY  FG T PGVYD    +Y LF+ GLSF+FPI +
Sbjct: 71  DLKRVKLKYAGVYFNSPSVLPTIEQVYHSFGATHPGVYDASHQLYALFFRGLSFSFPIDS 130

Query: 121 QYADCCQDREAELPLEFPDGTTPVTCRVSIYDGSADKKVGVGSLFDKAIAPSLPV----G 176
           +Y            L+FPDG TPV  R+SIYDGS            +A  P LP+    G
Sbjct: 131 KYTPGFGHGLGS--LKFPDGATPVVSRMSIYDGSN---------LAEAKVPPLPLSCYLG 179

Query: 177 SLYIEEVHA------KLGEELHFTVG--------------SQHIPFGASPQDVWTELGRP 216
           +LY+E V         LG +L                   ++HI FG S QDV + LG P
Sbjct: 180 NLYLESVEVLRDSGGTLGLKLQLVTEGGPGVALEPRVRTFTRHIYFGDSCQDVLSALGSP 239

Query: 217 CGIHQKQVDQMVIHSASDPRPRSTLCGDYFYNYYTRGLDILFDGQTHKIKKFIMHTNYPG 276
           C +  K  D+M IHS SD R   + C DYF+NY+T GLDILFD QTH++KKF++HTN+PG
Sbjct: 240 CKVFYKSEDKMKIHSPSDHRLVQSKCSDYFFNYFTLGLDILFDAQTHRVKKFVLHTNFPG 299

Query: 277 HADFNSYIKCNFII-LGSDFAGTSAEVHSYKNKITPNTKWEQVKEILGDCG-RAAIQTQG 334
           H +FN Y +CNF+I L +D  GT +   +    ITP +KW+QV EILG+ G R  +  + 
Sbjct: 300 HYNFNMYHRCNFVIQLPADKDGTDS--PTDSPPITPYSKWDQVSEILGNSGERPVVLHRA 357

Query: 335 STS--NPFGSTFVYGYQNIAFEVMKNGYISTVTMFQS 369
           S++  NPFGSTF YGYQ+I FEVM N +I++VT++ +
Sbjct: 358 SSTNTNPFGSTFCYGYQDIIFEVMPNNHIASVTLYGA 394


This family of proteins includes Lin-10 from C. elegans. Length = 395

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 369
PF03676394 UPF0183: Uncharacterised protein family (UPF0183); 100.0
KOG2819413 consensus Uncharacterized conserved protein [Funct 100.0
>PF03676 UPF0183: Uncharacterised protein family (UPF0183); InterPro: IPR005373 Members of this family are proteins of unknown function Back     alignment and domain information
Probab=100.00  E-value=2e-125  Score=946.80  Aligned_cols=357  Identities=47%  Similarity=0.862  Sum_probs=328.5

Q ss_pred             CCHHHHHHHHhcCCcccceEEEEecCCCCCCcceEEEcCCCCeEEEecCCCCeEEEEEEeeCCcceEEEccccccCCCCc
Q 017605            1 MPICEAFASIEQQPNIYDVVHVKYFDEEPLKLDIIISFPDHGFHLRFDPWSQRLRLIEIFDIKRLQMRYATSLIGGSSTL   80 (369)
Q Consensus         1 M~l~~vl~~Lk~~~~~~~~v~v~Ys~~~Pl~~~ivi~l~~~GirL~Fd~~~QRL~lIEv~d~~~~~L~Y~~~~~~~p~~~   80 (369)
                      |||||||++||+++++||+|||+||+++|+..||||+||++||||+|||++||||||||+||++++|+|++++|++|++.
T Consensus        11 ~~l~~vl~~lk~~~~~~~~v~~~Y~~~~P~~~~ivi~l~~~GirL~Fd~~~QrL~lIEv~d~~~i~L~Y~~~~~~~p~~~   90 (394)
T PF03676_consen   11 MSLHQVLTILKSEPQTFPKVDLIYSDQDPLSSDIVINLPENGIRLRFDGPSQRLRLIEVYDFSKIKLRYKGSVFSSPEIG   90 (394)
T ss_pred             CcHHHHHHHHHhccccCCceEEEECCCCCCcCCEEEEcCCCCeEEEECCCCcEEEEEEEecCccceEEeCcccccCcccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccceeehhccCCCCCCcccCCCCEEEEeecceEEEeeCCccccccccccCCCcccccCCCCCcceeEEEEeeCCCCcccc
Q 017605           81 ATFVAVYALFGPTFPGVYDKERSVYMLFYPGLSFAFPIPAQYADCCQDREAELPLEFPDGTTPVTCRVSIYDGSADKKVG  160 (369)
Q Consensus        81 ~t~~~Iy~~FGPTyPG~y~~~~~~y~LsYpGlaF~F~i~~~~~~~~~~~~~~l~l~~~~~~~p~~~~m~I~~~~~d~~v~  160 (369)
                      |||++||++|||||||+||+++++|+||||||||+||+++++++.+.++.+  +++|+++++|+++||+||         
T Consensus        91 pTf~~Iy~~FGPTyPG~yd~~~~~YvLsYpGlaF~Fpi~~~~~~~~~~~~~--sl~~~~~ssp~~tsmaIf---------  159 (394)
T PF03676_consen   91 PTFRHIYRLFGPTYPGEYDKSRGTYVLSYPGLAFSFPIPSKFQSSYSDGLD--SLEFPSGSSPVATSMAIF---------  159 (394)
T ss_pred             cchheeheccCCCCCCccCCCCCEEEEEECCEEEEeeCchhhcccccCCcc--eeecCCCCCcceeEEEEE---------
Confidence            999999999999999999999999999999999999999988888877753  889999999999999999         


Q ss_pred             cCCcccccCCCCCCC----CCeeEEEEEEEcCC------cEEEEecc--------------eEEEcCCCHHHHHHhcCCC
Q 017605          161 VGSLFDKAIAPSLPV----GSLYIEEVHAKLGE------ELHFTVGS--------------QHIPFGASPQDVWTELGRP  216 (369)
Q Consensus       161 ~G~s~~e~~~p~~~~----~~~~~e~v~v~~~~------~l~f~~~~--------------~~I~fG~T~QDVl~eLG~P  216 (369)
                      +|++|++++.|++|.    +++|+++|+|...+      .|.|....              ++|+||+|||||++|||||
T Consensus       160 ~G~s~~ear~p~lp~~~~~~~~~~~~v~v~~~~~~~~~~~l~l~~~~g~~~~~~~~~~~~~~~I~fGdT~qdv~~~lG~P  239 (394)
T PF03676_consen  160 SGSSWAEARAPPLPLSCYCGNLYLESVEVLRDNKETVGLELSLVTEGGPGRIEEPRRSNFERWIRFGDTPQDVLSELGPP  239 (394)
T ss_pred             cCCchhcccCCCccccccCCCcceeeEEeeccCCCCcCcEEEEEEcCCCcccccccccCceEEEEeCCCHHHHHHhhCCc
Confidence            999999999997764    89999999884432      44444332              7999999999999999999


Q ss_pred             CccccccCCceeeccCCCCCCCCCCcCcceeeecccceeEEEeCCcceEEEEEeeeCCCCccCcCceeeeeeEEeccCCC
Q 017605          217 CGIHQKQVDQMVIHSASDPRPRSTLCGDYFYNYYTRGLDILFDGQTHKIKKFIMHTNYPGHADFNSYIKCNFIILGSDFA  296 (369)
Q Consensus       217 ~~if~K~ddrM~IH~~~~~~~~~~~~~dyFyNYF~lGlDiLfd~~t~~v~K~ILHtN~PG~~~Fn~Y~RC~w~I~~~~~~  296 (369)
                      ++||||+||||+||++++++...+..+|||||||+||||||||++||+|||||||||+||||+||+|+||||+|....++
T Consensus       240 ~~~~~k~~d~m~ih~~~~~~~~~~~~~~yf~nYf~~G~Dilfd~~~~~v~K~ILHtN~PG~~~Fn~y~rC~f~I~~~~~~  319 (394)
T PF03676_consen  240 DRIFYKSDDRMSIHSPSSHKQVPSKPSDYFYNYFTLGLDILFDGNTHRVKKFILHTNIPGHYDFNRYNRCNFEIELSNDS  319 (394)
T ss_pred             cceeecccccccccccccccCCccCCCCEEEeccccceEEEEeCCCceEEEEEEecCCCCCccccceeeeeeEEEecCcc
Confidence            99999999999999998888888889999999999999999999999999999999999999999999999999997643


Q ss_pred             CCcccccccccccCCCCChhHhHhhhCCCC-CceEecCCCCC--CCCcceEEeeeCCeEEEEEcCCceEEEEEeeC
Q 017605          297 GTSAEVHSYKNKITPNTKWEQVKEILGDCG-RAAIQTQGSTS--NPFGSTFVYGYQNIAFEVMKNGYISTVTMFQS  369 (369)
Q Consensus       297 ~~~~~~~~~~~~it~~~~~~~i~~~l~~~~-~pvvlnR~~~~--npfGsT~lyG~~~iIfEV~~n~~IasVtlf~~  369 (369)
                      ... +.......|+++++|++|++.|+... |||||+|++++  ||||+|+||||+|||||||+||+|||||||+.
T Consensus       320 ~~~-~~~~~~~~i~~~~kwd~i~~~L~~~~~~pvvl~r~s~~n~npfGsT~~yG~~~~IfEVm~n~~IasVTly~~  394 (394)
T PF03676_consen  320 NET-DSPTNSPMITPYTKWDDIQEILGKAEDRPVVLNRASSSNDNPFGSTFLYGYQGIIFEVMKNGHIASVTLYQA  394 (394)
T ss_pred             ccc-ccccccceeeccCCHhHhHHhhcccccCCcccccccccCCCCCcceeEeCCCCEEEEEecCCcEEEEEEecC
Confidence            321 22223335999999999999997655 99999999886  99999999999999999999999999999974



>KOG2819 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query369
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 48.7 bits (115), Expect = 2e-06
 Identities = 68/416 (16%), Positives = 115/416 (27%), Gaps = 133/416 (31%)

Query: 5   EAFASIEQQPNIYDVVH---VKYFDEEPLKLDIIISF-----------PDHGFHLRFDPW 50
           +   S + Q  +   +    +K  +     L+++               DH  +++    
Sbjct: 169 DVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIH 228

Query: 51  SQRLRLIEIFDIKRLQMRYATSLI---------------GGSSTLAT--FVAVYALFGPT 93
           S +  L  +         Y   L+                    L T  F  V       
Sbjct: 229 SIQAELRRLL----KSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAA 284

Query: 94  FPGVYDKERSVYMLFYPGLSFAFPIPAQYADCCQDREAELPLEFPDGTTPVTCRV---SI 150
                  +    M   P    +  +  +Y DC   R  +LP E      P    +   SI
Sbjct: 285 TTTHISLD-HHSMTLTPDEVKS--LLLKYLDC---RPQDLPREVLTTN-PRRLSIIAESI 337

Query: 151 YDGSA----------DK-----KVGVGSL--------FDK-AIAPS---LPVGSLYI--- 180
            DG A          DK     +  +  L        FD+ ++ P    +P   L +   
Sbjct: 338 RDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWF 397

Query: 181 ---EEVHAKLGEELH-----------FTVGSQHIPFGASPQDVWTELGRPC----GIHQK 222
              +     +  +LH            T+    IP       ++ EL         +H+ 
Sbjct: 398 DVIKSDVMVVVNKLHKYSLVEKQPKESTI---SIP------SIYLELKVKLENEYALHRS 448

Query: 223 QVDQMVIHSASDPRPRSTLCGD-YFYNYYTRGLDILFDGQTHKIKKF------------- 268
            VD   I    D         D YFY++    L  +      ++  F             
Sbjct: 449 IVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNI--EHPERMTLFRMVFLDFRFLEQK 506

Query: 269 IMHTNYPGHADFNSYIKCNFIILGSDFAGTSAEVHSYKNKITPN-TKWEQ-VKEIL 322
           I H +   +A                   T  ++  YK  I  N  K+E+ V  IL
Sbjct: 507 IRHDSTAWNAS-------------GSILNTLQQLKFYKPYICDNDPKYERLVNAIL 549


Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00