Citrus Sinensis ID: 017671

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------37

MEDNSNVMASVHSTVFKESESLEGKGTKIEGYDFNQGVNYSQLLKSMVSTGFQASNFGDAIEVVNQMLDWRLADEVIPEDCDERERDPEYRKSVRCKVFLGFTSNLISSGVRDTVRYLVQHHMVDVVVTTAGGIEEDLVKCLAPTFKGDFALPGAYLRSKGLNRIGNLLVPNDNYCKFEDWIIPIFDQMLKEQNEEEISWTPSKVIARLGKEINDESSYLYWAYKNNIPVFCPGLTDGSLGDMLYFHSFRSPGLIIDIVQDIRAINGEAVHASPRKTGLIILGGGLPKHHICNANMMRNGADYAVFINTAQEFDGSDSGARPDEAVSWGKIRGSAKTVKVHCDATIAFPLLVAETFASRRNKFVETER

ccccccccHHHHHccccccccccccccccccccccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccccccccccccccccHHHcccccEEEEEEcccccccHHHHHHHHHHHcccccEEEEcccHHHHHHHHHHccccccccccccHHHHHccccccccEEcccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHccccccccHHHHHHHHccccEEccccccHHHHHHHHHHHHcccccEEcHHHHHHHHHHHHHHHccccEEEEEEcccccHHHHHHcccccccccEEEEEEcccccccccccccccccccccccccccccEEEEEEHHHHHHHHHHHHHHccccccccccc

ccccccccHHHHHHHEcccccccccccEEEcccccccccHHHHHHHHHHccccHcHHHHHHHHHHHHHHHHcccccccccccccccccHHcccccEEEEEEcccHHHHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHcccccccccccHHHHHHccccccccEEcccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHcccccccEEHHHHHccccEEcccccccccHHHHHHHcccccccEEEHHHHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHHHHHccccEEEEEEccccccccccccccccEEEcccEccccccEEEEEEEEHHHHHHHHHHHHHHHHccHHccc

MEDNSNVMASVHSTVFkeseslegkgtkiegydfnqgvnYSQLLKSMVSTgfqasnfgDAIEVVNQMLDwrladevipedcdererdpeyrksvrCKVFLGFTSNLISSGVRDTVRYLVQHHMVDVVVTTAGGIEEDLVkclaptfkgdfalpgaylrskglnrignllvpndnyckfedwiIPIFDQMLKEQNEEEISWTPSKVIARLGKEINDESSYLYWAYknnipvfcpgltdgslgdmlyfhsfrspgliiDIVQDIRAINgeavhasprktgliilggglpkhhicnanmmrngADYAVFINTaqefdgsdsgarpdeavswgkirgsaktvKVHCDATIAFPLLVAETFASRRNKFVETER

mednsnvmasVHSTvfkeseslegkgtkiEGYDFNQGVNYSQLLKSMVSTGFQASNFGDAIEVVNQMLDWRLADEVIpedcdererdpeyrksvrckvflgftsnlissgVRDTVRYLVQHHMVDVVVTTAGGIEEDLVKCLAPTFKGDFALPGAYLRSKGLNRIGNLLVPNDNYCKFEDWIIPIFDQMLKEQNEEEISWTPSKVIARLGKEINDESSYLYWAYKNNIPVFCPGLTDGSLGDMLYFHSFRSPGLIIDIVQDIRAINGEAVHASPRKTGLIILGGGLPKHHICNANMMRNGADYAVFINTAQefdgsdsgarPDEAVSWGKIRGSAKTVKVHCDATIAFPLLVAETFASrrnkfveter

MEDNSNVMASVHSTVFKESESLEGKGTKIEGYDFNQGVNYSQLLKSMVSTGFQASNFGDAIEVVNQMLDWRLADEVIpedcdererdpeYRKSVRCKVFLGFTSNLISSGVRDTVRYLVQHHMVDVVVTTAGGIEEDLVKCLAPTFKGDFALPGAYLRSKGLNRIGNLLVPNDNYCKFEDWIIPIFDQMLKEQNEEEISWTPSKVIARLGKEINDESSYLYWAYKNNIPVFCPGLTDGSLGDMLYFHSFRSPGLIIDIVQDIRAINGEAVHASPRKTGLIILGGGLPKHHICNANMMRNGADYAVFINTAQEFDGSDSGARPDEAVSWGKIRGSAKTVKVHCDATIAFPLLVAETFASRRNKFVETER

***************************KIEGYDFNQGVNYSQLLKSMVSTGFQASNFGDAIEVVNQMLDWRLADEVIPEDC********YRKSVRCKVFLGFTSNLISSGVRDTVRYLVQHHMVDVVVTTAGGIEEDLVKCLAPTFKGDFALPGAYLRSKGLNRIGNLLVPNDNYCKFEDWIIPIFDQMLKEQNEEEISWTPSKVIARLGKEINDESSYLYWAYKNNIPVFCPGLTDGSLGDMLYFHSFRSPGLIIDIVQDIRAINGEAVHASPRKTGLIILGGGLPKHHICNANMMRNGADYAVFINTAQEF************VSWGKIRGSAKTVKVHCDATIAFPLLVAETFA***********

**************************TKIEGYDFNQGVNYSQLLKSMVSTGFQASNFGDAIEVVNQMLDW*************RERDPEYRKSVRCKVFLGFTSNLISSGVRDTVRYLVQHHMVDVVVTTAGGIEEDLVKCLAPTFKGDFALPGAYLRSKGLNRIGNLLVPNDNYCKFEDWIIPIFDQMLKEQNEEEISWTPSKVIARLGKEINDESSYLYWAYKNNIPVFCPGLTDGSLGDMLYFHSFRSPGLIIDIVQDIRAINGEAVHASPRKTGLIILGGGLPKHHICNANMMRNGADYAVFINTAQEFDGSDSGARPDEAVSWGKIRGSAKTVKVHCDATIAFPLLVAETFA***********

*********SVHSTVFKESESLEGKGTKIEGYDFNQGVNYSQLLKSMVSTGFQASNFGDAIEVVNQMLDWRLADEVIPED**********RKSVRCKVFLGFTSNLISSGVRDTVRYLVQHHMVDVVVTTAGGIEEDLVKCLAPTFKGDFALPGAYLRSKGLNRIGNLLVPNDNYCKFEDWIIPIFDQMLKEQNEEEISWTPSKVIARLGKEINDESSYLYWAYKNNIPVFCPGLTDGSLGDMLYFHSFRSPGLIIDIVQDIRAINGEAVHASPRKTGLIILGGGLPKHHICNANMMRNGADYAVFINTAQEFDGSDSGARPDEAVSWGKIRGSAKTVKVHCDATIAFPLLVAETFASRRNKFVETER

**************VFKESESLEGKGTKIEGYDFNQGVNYSQLLKSMVSTGFQASNFGDAIEVVNQMLDWRLADE********RERDPEYRKSVRCKVFLGFTSNLISSGVRDTVRYLVQHHMVDVVVTTAGGIEEDLVKCLAPTFKGDFALPGAYLRSKGLNRIGNLLVPNDNYCKFEDWIIPIFDQMLKEQNEEEISWTPSKVIARLGKEINDESSYLYWAYKNNIPVFCPGLTDGSLGDMLYFHSFRSPGLIIDIVQDIRAINGEAVHASPRKTGLIILGGGLPKHHICNANMMRNGADYAVFINTAQEFDGSDSGARPDEAVSWGKIRGSAKTVKVHCDATIAFPLLVAETFASRRNK******

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		368	2.2.26 [Sep-21-2011]
Q6RJS2		368	Deoxyhypusine synthase OS	N/A	no	0.989	0.989	0.841	0.0
Q9FI94		368	Deoxyhypusine synthase OS	yes	no	0.994	0.994	0.828	0.0
Q9AXQ8		373	Deoxyhypusine synthase OS	N/A	no	0.983	0.970	0.828	0.0
Q9SC14		371	Deoxyhypusine synthase OS	N/A	no	0.980	0.973	0.817	0.0
Q9AXR0		381	Deoxyhypusine synthase OS	N/A	no	0.978	0.944	0.804	1e-180
Q9SC80		379	Deoxyhypusine synthase OS	N/A	no	0.986	0.957	0.795	1e-179
Q9AXQ9		376	Deoxyhypusine synthase OS	N/A	no	0.956	0.936	0.759	1e-164
Q9SC13		370	Homospermidine synthase 1	N/A	no	0.975	0.970	0.741	1e-164
Q9M4B0		370	Homospermidine synthase O	N/A	no	0.975	0.970	0.738	1e-163
P60038		370	Homospermidine synthase 2	N/A	no	0.975	0.970	0.738	1e-163

>sp\|Q6RJS2\|DHYS_BRANA Deoxyhypusine synthase OS=Brassica napus GN=DHS PE=2 SV=1	Back alignment and function desciption

 Score =  663 bits (1711), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/366 (84%), Positives = 343/366 (93%), Gaps = 2/366 (0%)

Query: 1   MEDNSNVMASVHSTVFKESESLEGKGTKIEGYDFNQGVNYSQLLKSMVSTGFQASNFGDA 60
           ME++  V++SVHSTVFKESESLEGK  KIEGYDFNQGVNY +LL+SM++TGFQASN GD 
Sbjct: 1   MEED-RVLSSVHSTVFKESESLEGKCDKIEGYDFNQGVNYPKLLRSMLTTGFQASNLGDV 59

Query: 61  IEVVNQMLDWRLADEVI-PEDCDERERDPEYRKSVRCKVFLGFTSNLISSGVRDTVRYLV 119
           I+VVNQML+WRL+DE I PEDC E E+DP YR+SV+CK+FLGFTSNL+SSGVR+T+RYLV
Sbjct: 60  IDVVNQMLEWRLSDETIAPEDCSEEEKDPAYRESVKCKIFLGFTSNLVSSGVRETIRYLV 119

Query: 120 QHHMVDVVVTTAGGIEEDLVKCLAPTFKGDFALPGAYLRSKGLNRIGNLLVPNDNYCKFE 179
           QHHMVDV+VTT GG+EEDL+KCLAPTFKGDF+LPGAYLRSKGLNRIGNLLVPNDNYCKFE
Sbjct: 120 QHHMVDVIVTTTGGVEEDLIKCLAPTFKGDFSLPGAYLRSKGLNRIGNLLVPNDNYCKFE 179

Query: 180 DWIIPIFDQMLKEQNEEEISWTPSKVIARLGKEINDESSYLYWAYKNNIPVFCPGLTDGS 239
           DWIIPIFDQMLKEQ EE + WTPSK++ARLGKEIN+ESSYLYWAYK NIPVFC GLTDGS
Sbjct: 180 DWIIPIFDQMLKEQKEESVLWTPSKLLARLGKEINNESSYLYWAYKMNIPVFCRGLTDGS 239

Query: 240 LGDMLYFHSFRSPGLIIDIVQDIRAINGEAVHASPRKTGLIILGGGLPKHHICNANMMRN 299
           LGDMLYFHSFR+ GL+ID+VQDIRA+NGEAVHA+PRKTG+IILGGGLPKHHICNANMMRN
Sbjct: 240 LGDMLYFHSFRTSGLVIDVVQDIRAMNGEAVHATPRKTGMIILGGGLPKHHICNANMMRN 299

Query: 300 GADYAVFINTAQEFDGSDSGARPDEAVSWGKIRGSAKTVKVHCDATIAFPLLVAETFASR 359
           GADYAVFINT QEFDGSDSGARPDEAVSWGKIRGSAKTVKV+CDATIAFPLLVAETFAS+
Sbjct: 300 GADYAVFINTGQEFDGSDSGARPDEAVSWGKIRGSAKTVKVYCDATIAFPLLVAETFASK 359

Query: 360 RNKFVE 365
           R +  E
Sbjct: 360 REQSCE 365

Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue. Also able to produce homospermidine from putrescine.
Brassica napus (taxid: 3708)
EC: 2EC: .EC: 5EC: .EC: 1EC: .EC: 4EC: 6

>sp\|Q9FI94\|DHYS_ARATH Deoxyhypusine synthase OS=Arabidopsis thaliana GN=DHS PE=2 SV=1	Back alignment and function description

>sp\|Q9AXQ8\|DHYS_DIACA Deoxyhypusine synthase OS=Dianthus caryophyllus GN=DHS PE=2 SV=1	Back alignment and function description

>sp\|Q9SC14\|DHYS_SENVE Deoxyhypusine synthase OS=Senecio vernalis GN=DHS1 PE=2 SV=1	Back alignment and function description

>sp\|Q9AXR0\|DHYS_SOLLC Deoxyhypusine synthase OS=Solanum lycopersicum GN=DHS PE=2 SV=1	Back alignment and function description

>sp\|Q9SC80\|DHYS_TOBAC Deoxyhypusine synthase OS=Nicotiana tabacum GN=DHS1 PE=2 SV=1	Back alignment and function description

>sp\|Q9AXQ9\|DHYS_MUSAC Deoxyhypusine synthase OS=Musa acuminata GN=DHS PE=2 SV=1	Back alignment and function description

>sp\|Q9SC13\|HSS1_SENVE Homospermidine synthase 1 OS=Senecio vernalis GN=HSS1 PE=1 SV=1	Back alignment and function description

>sp\|Q9M4B0\|HSS1_SENVU Homospermidine synthase OS=Senecio vulgaris GN=HSS1 PE=1 SV=1	Back alignment and function description

>sp\|P60038\|HSS2_SENVE Homospermidine synthase 2 OS=Senecio vernalis PE=1 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		368
255578652		366	deoxyhypusine synthase, putative [Ricinu	0.980	0.986	0.908	0.0
449452006		374	PREDICTED: deoxyhypusine synthase-like [	0.991	0.975	0.854	0.0
224075938		367	predicted protein [Populus trichocarpa]	0.986	0.989	0.862	0.0
333108563		366	deoxyhypusine synthase [Populus tremula	0.980	0.986	0.869	0.0
297810691		367	hypothetical protein ARALYDRAFT_487392 [	0.991	0.994	0.834	0.0
54035767		368	RecName: Full=Deoxyhypusine synthase gi\|	0.989	0.989	0.841	0.0
351726826		393	dhs1 [Glycine max] gi\|223452572\|gb\|ACM89	0.959	0.898	0.881	0.0
225456211		362	PREDICTED: deoxyhypusine synthase [Vitis	0.970	0.986	0.873	0.0
68146569		373	deoxyhypusine synthase [Crotalaria scass	0.961	0.949	0.875	0.0
147798358		362	hypothetical protein VITISV_031079 [Viti	0.970	0.986	0.871	0.0

>gi\|255578652\|ref\|XP_002530187.1\| deoxyhypusine synthase, putative [Ricinus communis] gi\|223530306\|gb\|EEF32201.1\| deoxyhypusine synthase, putative [Ricinus communis]	Back alignment and taxonomy information

 Score =  695 bits (1793), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/361 (90%), Positives = 346/361 (95%)

Query: 7   VMASVHSTVFKESESLEGKGTKIEGYDFNQGVNYSQLLKSMVSTGFQASNFGDAIEVVNQ 66
           + +SVH+TVFKESESLEGK  KIEGYDFNQGVNYSQLLKSMVSTGFQASN GDAI VVNQ
Sbjct: 5   LASSVHATVFKESESLEGKCIKIEGYDFNQGVNYSQLLKSMVSTGFQASNLGDAIGVVNQ 64

Query: 67  MLDWRLADEVIPEDCDERERDPEYRKSVRCKVFLGFTSNLISSGVRDTVRYLVQHHMVDV 126
           MLDWRLADE I EDC E ERDP YR SVRCKVFLGFTSNL+SSGVRDTVRYLVQHH+VDV
Sbjct: 65  MLDWRLADEDITEDCSEEERDPVYRDSVRCKVFLGFTSNLVSSGVRDTVRYLVQHHLVDV 124

Query: 127 VVTTAGGIEEDLVKCLAPTFKGDFALPGAYLRSKGLNRIGNLLVPNDNYCKFEDWIIPIF 186
           VVTTAGGIEEDL+KCLAPT+KGDF+LPGA LRSKGLNRIGNLLVPNDNYCKFEDWIIPIF
Sbjct: 125 VVTTAGGIEEDLIKCLAPTYKGDFSLPGAQLRSKGLNRIGNLLVPNDNYCKFEDWIIPIF 184

Query: 187 DQMLKEQNEEEISWTPSKVIARLGKEINDESSYLYWAYKNNIPVFCPGLTDGSLGDMLYF 246
           DQMLKEQ EE +SWTPSKVIARLGKEIN+ESSYLYWAYKNNIPVFCPGLTDGSLGDMLYF
Sbjct: 185 DQMLKEQFEENVSWTPSKVIARLGKEINNESSYLYWAYKNNIPVFCPGLTDGSLGDMLYF 244

Query: 247 HSFRSPGLIIDIVQDIRAINGEAVHASPRKTGLIILGGGLPKHHICNANMMRNGADYAVF 306
           HSFRSPGLI+DIVQDIRA+NGEAVHA+PRKTG+I+LGGGLPKHHICNANMMRNGADYAVF
Sbjct: 245 HSFRSPGLIVDIVQDIRAMNGEAVHANPRKTGIIVLGGGLPKHHICNANMMRNGADYAVF 304

Query: 307 INTAQEFDGSDSGARPDEAVSWGKIRGSAKTVKVHCDATIAFPLLVAETFASRRNKFVET 366
           INTAQEFDGSDSGARPDEAVSWGKIRGSAKTVKVHCDATIAFPLLVAETFASRRN +V+T
Sbjct: 305 INTAQEFDGSDSGARPDEAVSWGKIRGSAKTVKVHCDATIAFPLLVAETFASRRNGYVKT 364

Query: 367 E 367
           +
Sbjct: 365 K 365

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|449452006\|ref\|XP_004143751.1\| PREDICTED: deoxyhypusine synthase-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|224075938\|ref\|XP_002304837.1\| predicted protein [Populus trichocarpa] gi\|222842269\|gb\|EEE79816.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|333108563\|gb\|AEF15865.1\| deoxyhypusine synthase [Populus tremula x Populus alba]	Back alignment and taxonomy information

>gi\|297810691\|ref\|XP_002873229.1\| hypothetical protein ARALYDRAFT_487392 [Arabidopsis lyrata subsp. lyrata] gi\|297319066\|gb\|EFH49488.1\| hypothetical protein ARALYDRAFT_487392 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|54035767\|sp\|Q6RJS2.1\|DHYS_BRANA RecName: Full=Deoxyhypusine synthase gi\|40805175\|gb\|AAR91928.1\| deoxyhypusine synthase [Brassica napus]	Back alignment and taxonomy information

>gi\|351726826\|ref\|NP_001235604.1\| dhs1 [Glycine max] gi\|223452572\|gb\|ACM89613.1\| dhs1 [Glycine max]	Back alignment and taxonomy information

>gi\|225456211\|ref\|XP_002282921.1\| PREDICTED: deoxyhypusine synthase [Vitis vinifera] gi\|297734353\|emb\|CBI15600.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|68146569\|emb\|CAI91280.1\| deoxyhypusine synthase [Crotalaria scassellatii]	Back alignment and taxonomy information

>gi\|147798358\|emb\|CAN72311.1\| hypothetical protein VITISV_031079 [Vitis vinifera]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		368
TAIR\|locus:2153664		368	DHS "deoxyhypusine synthase" [	0.994	0.994	0.812	4.2e-166
UNIPROTKB\|E2RRL4		369	DHPS "Uncharacterized protein"	0.956	0.953	0.619	1.3e-121
UNIPROTKB\|P49366		369	DHPS "Deoxyhypusine synthase"	0.959	0.956	0.620	1.3e-121
UNIPROTKB\|F1SEX8		369	DHPS "Uncharacterized protein"	0.956	0.953	0.616	3.6e-121
RGD\|1303326		369	Dhps "deoxyhypusine synthase"	0.956	0.953	0.614	5.8e-121
MGI\|MGI:2683592		369	Dhps "deoxyhypusine synthase"	0.956	0.953	0.611	3.2e-120
UNIPROTKB\|Q6EWQ6		369	DHPS "Deoxyhypusine synthase"	0.961	0.959	0.610	6.7e-120
DICTYBASE\|DDB_G0285725		376	dhps "deoxyhypusine synthase"	0.929	0.909	0.621	3.7e-119
ZFIN\|ZDB-GENE-040426-2001		361	dhps "deoxyhypusine synthase"	0.948	0.966	0.612	1.3e-118
FB\|FBgn0035854		368	CG8005 [Drosophila melanogaste	0.932	0.932	0.600	2.7e-116

TAIR\|locus:2153664 DHS "deoxyhypusine synthase" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1616 (573.9 bits), Expect = 4.2e-166, P = 4.2e-166
 Identities = 299/368 (81%), Positives = 338/368 (91%)

Query:     1 MEDNSNVMASVHSTVFKESESLEGKGTKIEGYDFNQGVNYSQLLKSMVSTGFQASNFGDA 60
             MED+  V +SVHSTVFKESESLEGK  KIEGYDFNQGV+Y +L++SM++TGFQASN G+A
Sbjct:     1 MEDD-RVFSSVHSTVFKESESLEGKCDKIEGYDFNQGVDYPKLMRSMLTTGFQASNLGEA 59

Query:    61 IEVVNQMLDWRLADEV-IXXXXXXXXXXXXYRKSVRCKVFLGFTSNLISSGVRDTVRYLV 119
             I+VVNQMLDWRLADE  +            +R+SV+CK+FLGFTSNL+SSGVRDT+RYLV
Sbjct:    60 IDVVNQMLDWRLADETTVAEDCSEEEKNPSFRESVKCKIFLGFTSNLVSSGVRDTIRYLV 119

Query:   120 QHHMVDVVVTTAGGIEEDLVKCLAPTFKGDFALPGAYLRSKGLNRIGNLLVPNDNYCKFE 179
             QHHMVDV+VTT GG+EEDL+KCLAPTFKGDF+LPGAYLRSKGLNRIGNLLVPNDNYCKFE
Sbjct:   120 QHHMVDVIVTTTGGVEEDLIKCLAPTFKGDFSLPGAYLRSKGLNRIGNLLVPNDNYCKFE 179

Query:   180 DWIIPIFDQMLKEQNEEEISWTPSKVIARLGKEINDESSYLYWAYKNNIPVFCPGLTDGS 239
             DWIIPIFD+MLKEQ EE + WTPSK++ARLGKEIN+ESSYLYWAYK NIPVFCPGLTDGS
Sbjct:   180 DWIIPIFDEMLKEQKEENVLWTPSKLLARLGKEINNESSYLYWAYKMNIPVFCPGLTDGS 239

Query:   240 LGDMLYFHSFRSPGLIIDIVQDIRAINGEAVHASPRKTGLIILGGGLPKHHICNANMMRN 299
             LGDMLYFHSFR+ GLIID+VQDIRA+NGEAVHA+P+KTG+IILGGGLPKHHICNANMMRN
Sbjct:   240 LGDMLYFHSFRTSGLIIDVVQDIRAMNGEAVHANPKKTGMIILGGGLPKHHICNANMMRN 299

Query:   300 GADYAVFINTAQEFDGSDSGARPDEAVSWGKIRGSAKTVKVHCDATIAFPLLVAETFASR 359
             GADYAVFINT QEFDGSDSGARPDEAVSWGKIRGSAKTVKV+CDATIAFPLLVAETFA++
Sbjct:   300 GADYAVFINTGQEFDGSDSGARPDEAVSWGKIRGSAKTVKVYCDATIAFPLLVAETFATK 359

Query:   360 RNKFVETE 367
             R++  E++
Sbjct:   360 RDQTCESK 367

GO:0005634 "nucleus" evidence=ISM

GO:0008612 "peptidyl-lysine modification to hypusine" evidence=IEA;ISS

GO:0009553 "embryo sac development" evidence=IMP

UNIPROTKB\|E2RRL4 DHPS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

UNIPROTKB\|P49366 DHPS "Deoxyhypusine synthase" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|F1SEX8 DHPS "Uncharacterized protein" [Sus scrofa (taxid:9823)]	Back alignment and assigned GO terms

RGD\|1303326 Dhps "deoxyhypusine synthase" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

MGI\|MGI:2683592 Dhps "deoxyhypusine synthase" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

UNIPROTKB\|Q6EWQ6 DHPS "Deoxyhypusine synthase" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

DICTYBASE\|DDB_G0285725 dhps "deoxyhypusine synthase" [Dictyostelium discoideum (taxid:44689)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-040426-2001 dhps "deoxyhypusine synthase" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

FB\|FBgn0035854 CG8005 [Drosophila melanogaster (taxid:7227)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O50105	DHYS_PYRHO	2, ., 5, ., 1, ., 4, 6	0.4512	0.8913	0.9590	yes	no
A6URC0	DHYS_METVS	2, ., 5, ., 1, ., 4, 6	0.4497	0.8831	0.9701	yes	no
Q9VSF4	DHYS_DROME	2, ., 5, ., 1, ., 4, 6	0.6120	0.9320	0.9320	yes	no
Q9SC80	DHYS_TOBAC	2, ., 5, ., 1, ., 4, 6	0.7956	0.9864	0.9577	N/A	no
B6YVB1	DHYS_THEON	2, ., 5, ., 1, ., 4, 6	0.4362	0.875	0.9611	yes	no
Q9M4B0	HSS1_SENVU	2, ., 5, ., 1, ., 4, 5	0.7382	0.9755	0.9702	N/A	no
Q6CNG7	DHYS_KLULA	2, ., 5, ., 1, ., 4, 6	0.5564	0.9320	0.9050	yes	no
Q9FI94	DHYS_ARATH	2, ., 5, ., 1, ., 4, 6	0.8288	0.9945	0.9945	yes	no
C5A5L0	DHYS_THEGJ	2, ., 5, ., 1, ., 4, 6	0.4568	0.8913	0.9761	yes	no
Q9AXR0	DHYS_SOLLC	2, ., 5, ., 1, ., 4, 6	0.8048	0.9782	0.9448	N/A	no
Q9SC13	HSS1_SENVE	2, ., 5, ., 1, ., 4, 5	0.7410	0.9755	0.9702	N/A	no
Q6CG56	DHYS_YARLI	2, ., 5, ., 1, ., 4, 6	0.5702	0.8885	0.9450	yes	no
Q9SC14	DHYS_SENVE	2, ., 5, ., 1, ., 4, 6	0.8171	0.9809	0.9730	N/A	no
P49366	DHYS_HUMAN	2, ., 5, ., 1, ., 4, 6	0.6274	0.9565	0.9539	yes	no
Q8SQN2	DHYS_ENCCU	2, ., 5, ., 1, ., 4, 6	0.4556	0.8342	0.8480	yes	no
P60038	HSS2_SENVE	2, ., 5, ., 1, ., 4, 5	0.7382	0.9755	0.9702	N/A	no
Q6AY53	DHYS_RAT	2, ., 5, ., 1, ., 4, 6	0.6225	0.9565	0.9539	yes	no
Q54MQ7	DHYS_DICDI	2, ., 5, ., 1, ., 4, 6	0.6477	0.8940	0.875	yes	no
Q6RJS2	DHYS_BRANA	2, ., 5, ., 1, ., 4, 6	0.8415	0.9891	0.9891	N/A	no
Q9HPX2	DHYS_HALSA	2, ., 5, ., 1, ., 4, 6	0.3885	0.8097	0.9030	yes	no
P49365	DHYS_NEUCR	2, ., 5, ., 1, ., 4, 6	0.5733	0.9157	0.9546	N/A	no
P38791	DHYS_YEAST	2, ., 5, ., 1, ., 4, 6	0.5442	0.9483	0.9018	yes	no
Q9XXJ0	DHYS_CAEEL	2, ., 5, ., 1, ., 4, 6	0.5782	0.9347	0.9272	yes	no
Q6FRN2	DHYS_CANGA	2, ., 5, ., 1, ., 4, 6	0.5641	0.9375	0.8961	yes	no
Q5JEY0	DHYS_PYRKO	2, ., 5, ., 1, ., 4, 6	0.4532	0.875	0.9554	yes	no
Q9V0N5	DHYS_PYRAB	2, ., 5, ., 1, ., 4, 6	0.4364	0.8559	0.9402	yes	no
Q3TXU5	DHYS_MOUSE	2, ., 5, ., 1, ., 4, 6	0.6169	0.9565	0.9539	yes	no
B0R5L2	DHYS_HALS3	2, ., 5, ., 1, ., 4, 6	0.3885	0.8097	0.9030	yes	no
Q6BJH5	DHYS_DEBHA	2, ., 5, ., 1, ., 4, 6	0.5760	0.9293	0.9047	yes	no
Q9AXQ9	DHYS_MUSAC	2, ., 5, ., 1, ., 4, 6	0.7592	0.9565	0.9361	N/A	no
Q9AXQ8	DHYS_DIACA	2, ., 5, ., 1, ., 4, 6	0.8288	0.9836	0.9705	N/A	no
Q75EW4	DHYS_ASHGO	2, ., 5, ., 1, ., 4, 6	0.5418	0.9592	0.9240	yes	no
O94337	DHYS_SCHPO	2, ., 5, ., 1, ., 4, 6	0.5718	0.8913	0.9371	yes	no
Q8U407	DHYS_PYRFU	2, ., 5, ., 1, ., 4, 6	0.4645	0.875	0.9583	yes	no
Q6EWQ6	DHYS_BOVIN	2, ., 5, ., 1, ., 4, 6	0.6267	0.9402	0.9376	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.5.1.46	0.994
3rd Layer	2.5.1	0.998

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_fgenesh4_pm.C_LG_III0715	hypothetical protein (368 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.III.614.1	GMP synthetase (EC-6.3.5.2) (434 aa)			•				0.706
	estExt_fgenesh4_pm.C_LG_VIII0372	SubName- Full=Putative uncharacterized protein; (160 aa)	•		•	•	•	•	0.667
	estExt_Genewise1_v1.C_LG_X0940	SubName- Full=Putative uncharacterized protein; (159 aa)	•		•	•	•	•	0.664
	estExt_Genewise1_v1.C_LG_VI0968	SubName- Full=Putative uncharacterized protein; (160 aa)	•		•	•	•	•	0.651
	estExt_fgenesh4_pm.C_LG_XVIII0351	SubName- Full=Putative uncharacterized protein; (160 aa)	•		•	•	•	•	0.649
	estExt_Genewise1_v1.C_LG_IX0414	SubName- Full=Putative uncharacterized protein; (404 aa)			•			•	0.647
	gw1.XV.2041.1	hypothetical protein (500 aa)		•	•				0.610
	estExt_fgenesh4_pg.C_LG_IX0484	phenylalanyl-tRNA synthetase alpha chain (EC-6.1.1.20) (484 aa)			•				0.607
	fgenesh4_pg.C_LG_XII000934	hypothetical protein (540 aa)		•	•				0.599
	estExt_fgenesh4_pg.C_LG_V1356	hypothetical protein (319 aa)			•		•	•	0.592

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		368
pfam01916		297	pfam01916, DS, Deoxyhypusine synthase	1e-164
COG1899		318	COG1899, DYS1, Deoxyhypusine synthase [Posttransla	1e-137
PRK03971		334	PRK03971, PRK03971, putative deoxyhypusine synthas	1e-128
TIGR00321		301	TIGR00321, dhys, deoxyhypusine synthase	1e-126
PRK01221		312	PRK01221, PRK01221, putative deoxyhypusine synthas	5e-84
PRK02301		316	PRK02301, PRK02301, putative deoxyhypusine synthas	8e-46
PRK00805		329	PRK00805, PRK00805, putative deoxyhypusine synthas	3e-45
PRK02492		347	PRK02492, PRK02492, deoxyhypusine synthase-like pr	1e-31
PRK00770		384	PRK00770, PRK00770, deoxyhypusine synthase-like pr	5e-22

>gnl\|CDD\|145208 pfam01916, DS, Deoxyhypusine synthase	Back alignment and domain information

 Score =  461 bits (1189), Expect = e-164
 Identities = 186/318 (58%), Positives = 232/318 (72%), Gaps = 21/318 (6%)

Query: 40  YSQLLKSMVSTGFQASNFGDAIEVVNQMLDWRLADEVIPEDCDERERDPEYRKSVRCKVF 99
             +LL+ M  TGFQAS  G AI++  +M++ R                    K     +F
Sbjct: 1   VEELLEYMGRTGFQASRVGRAIKIWREMIEKR-------------------EKGEEITIF 41

Query: 100 LGFTSNLISSGVRDTVRYLVQHHMVDVVVTTAGGIEEDLVKCLAPTFKGDFALPGAYLRS 159
           LG+TSNLISSG+R+ +RYLVQH  +  +VTTAGG+EEDL+KCL PT+ GDF +    LR 
Sbjct: 42  LGYTSNLISSGMREIIRYLVQHKKISALVTTAGGVEEDLIKCLGPTYLGDFEVDDKELRE 101

Query: 160 KGLNRIGNLLVPNDNYCKFEDWIIPIFDQMLKEQNEEEISWTPSKVIARLGKEINDESSY 219
           +G+NRIGN+ VPN+NY  FE+W++PIF++ML+EQ +E   WTPS+ I  LGKEINDE S 
Sbjct: 102 EGINRIGNVFVPNENYEAFEEWLMPIFEKMLEEQEKEGKIWTPSEFIHELGKEINDERSV 161

Query: 220 LYWAYKNNIPVFCPGLTDGSLGDMLYFHSFRSPGLIIDIVQDIRAINGEAVHASPRKTGL 279
           LYWA+KNNIP+FCP LTDGSLGDMLYF++ ++P L IDIV DIR IN  A  A  ++TG+
Sbjct: 162 LYWAHKNNIPIFCPALTDGSLGDMLYFYTKKNPKLRIDIVNDIRKINDLAFSA--KRTGM 219

Query: 280 IILGGGLPKHHICNANMMRNGADYAVFINTAQEFDGSDSGARPDEAVSWGKIRGSAKTVK 339
           IILGGGLPKHHI NAN++RNGADYAV+I TAQ +DGS SGA P+EAVSWGKI+  A  V 
Sbjct: 220 IILGGGLPKHHILNANLLRNGADYAVYITTAQPWDGSLSGAPPEEAVSWGKIKAGADAVT 279

Query: 340 VHCDATIAFPLLVAETFA 357
           V+ DATIAFPLLVA T A
Sbjct: 280 VYGDATIAFPLLVAGTLA 297

Eukaryotic initiation factor 5A (eIF-5A) contains an unusual amino acid, hypusine [N epsilon-(4-aminobutyl-2-hydroxy)lysine]. The first step in the post-translational formation of hypusine is catalyzed by the enzyme deoxyhypusine synthase (DS) EC:1.1.1.249. The modified version of eIF-5A, and DS, are required for eukaryotic cell proliferation. Length = 297

>gnl\|CDD\|224811 COG1899, DYS1, Deoxyhypusine synthase [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>gnl\|CDD\|179688 PRK03971, PRK03971, putative deoxyhypusine synthase; Provisional	Back alignment and domain information

>gnl\|CDD\|232918 TIGR00321, dhys, deoxyhypusine synthase	Back alignment and domain information

>gnl\|CDD\|234922 PRK01221, PRK01221, putative deoxyhypusine synthase; Provisional	Back alignment and domain information

>gnl\|CDD\|235027 PRK02301, PRK02301, putative deoxyhypusine synthase; Provisional	Back alignment and domain information

>gnl\|CDD\|234841 PRK00805, PRK00805, putative deoxyhypusine synthase; Provisional	Back alignment and domain information

>gnl\|CDD\|235043 PRK02492, PRK02492, deoxyhypusine synthase-like protein; Provisional	Back alignment and domain information

>gnl\|CDD\|179117 PRK00770, PRK00770, deoxyhypusine synthase-like protein; Provisional	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		368
KOG2924		366	consensus Deoxyhypusine synthase [Posttranslationa	100.0
PRK03971		334	putative deoxyhypusine synthase; Provisional	100.0
TIGR00321		301	dhys deoxyhypusine synthase. This family of appare	100.0
PRK01221		312	putative deoxyhypusine synthase; Provisional	100.0
PRK02301		316	putative deoxyhypusine synthase; Provisional	100.0
COG1899		318	DYS1 Deoxyhypusine synthase [Posttranslational mod	100.0
PRK00805		329	putative deoxyhypusine synthase; Provisional	100.0
PRK02492		347	deoxyhypusine synthase-like protein; Provisional	100.0
PF01916		299	DS: Deoxyhypusine synthase; InterPro: IPR002773 Eu	100.0
PRK00770		384	deoxyhypusine synthase-like protein; Provisional	100.0
COG1915		415	Uncharacterized conserved protein [Function unknow	94.47
TIGR00300		407	conserved hypothetical protein TIGR00300. All memb	91.56

>KOG2924 consensus Deoxyhypusine synthase [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

Probab=100.00  E-value=1.7e-135  Score=965.78  Aligned_cols=358  Identities=67%  Similarity=1.116  Sum_probs=345.6

Q ss_pred             CcccccccccccccccccCCCCCccccccccCCCCCHHHHHHHHhhcCcccccHHHHHHHHHHHHhccccCCCCCccc-c
Q 017671            4 NSNVMASVHSTVFKESESLEGKGTKIEGYDFNQGVNYSQLLKSMVSTGFQASNFGDAIEVVNQMLDWRLADEVIPEDC-D   82 (368)
Q Consensus         4 ~~~~~~~~~~avl~~s~~~~~~~~~V~g~d~~~~~~~~~L~~~~~~~GFqA~~l~~A~~i~~~M~~~~~~d~~~~~~~-~   82 (368)
                      +...|+.+++||++.|+++|+...+|+||||+++.++.+|+++|.+|||||+||++|++++++|++||  |+|+..|+ .
T Consensus         6 ~~~~p~l~~daVl~~s~~~~d~s~~v~G~Dfnk~~~~~~l~~s~~t~GFQatnl~~Av~~in~M~~~r--d~~~~~d~d~   83 (366)
T KOG2924|consen    6 EREAPALAQDAVLKHSSKLPDESTQVRGYDFNKGVDYSALLESFGTTGFQATNLGRAVQQINRMLNWR--DEPLSADDDS   83 (366)
T ss_pred             hhccchhhHHHHHHhccCCCCCCcccccccccccccHHHHHHHHhccccccccHHHHHHHHHHHHhcc--cCcccccccc
Confidence            56789999999999999999999999999999999999999999999999999999999999999999  77777554 4


Q ss_pred             cccCCccccccccceEEEccccccchhhhHHHHHHHHhcCceeEEEeCCCchhHHHHHhhcCccccCCCCCchhHHhCCC
Q 017671           83 ERERDPEYRKSVRCKVFLGFTSNLISSGVRDTVRYLVQHHMVDVVVTTAGGIEEDLVKCLAPTFKGDFALPGAYLRSKGL  162 (368)
Q Consensus        83 ~~~~~~~~~~~~~~tIfL~~tgnmvssGlr~~i~~Li~~~~VD~IVtTgg~lehDi~~~l~~~y~G~~~~dd~~Lr~~gi  162 (368)
                      ++...+..|....||||||||||+||||+|++||+|+||+||||||||+|++|||++|||+|+|.|+|.+++++||++|+
T Consensus        84 ~~~~~~~~r~~~~ctIFlGyTSNliSSGlRetirylvqh~mVdviVttaGGvEEDlIKclaPTy~g~F~L~G~~LR~~Gl  163 (366)
T KOG2924|consen   84 HEDLTFSRRPLTSCTIFLGYTSNLISSGLRETIRYLVQHNMVDVIVTTAGGVEEDLIKCLAPTYLGDFSLDGKELRENGL  163 (366)
T ss_pred             ccccCcccccccceEEEEecchhhhhhhHHHHHHHHHHhcceeEEEecCCccHHHHHHHhCccceeeeecChHHHHhhhh
Confidence            45666778889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cceeeeeecCccHHHHHHHHHHHHHHHHHhhcccCcccCHHHHHHHhccccCCCchHHHHHHHCCCceecCCCCchhHHH
Q 017671          163 NRIGNLLVPNDNYCKFEDWIIPIFDQMLKEQNEEEISWTPSKVIARLGKEINDESSYLYWAYKNNIPVFCPGLTDGSLGD  242 (368)
Q Consensus       163 nRigdv~ip~e~y~~~E~~i~~il~~l~~~q~~~~~~~t~~e~~~~lG~~i~~e~Sil~~A~k~~VPVf~Pa~tDgsiG~  242 (368)
                      |||||++|||||||+||+|+.||+++|+++|+.++..||||+||++||++||+|+|||||||||+|||||||+||||+|+
T Consensus       164 NRiGNllvPndNYckfEdWl~pIld~mleeq~~~~~iwTPSk~I~rlGk~IndesSvlYWA~Kn~IPvf~PaltDGSlGD  243 (366)
T KOG2924|consen  164 NRIGNLLVPNDNYCKFEDWLMPILDEMLEEQKTEGVIWTPSKMIARLGKEINDESSVLYWAAKNHIPVFSPALTDGSLGD  243 (366)
T ss_pred             hhhccEecCCcchhhHHHHHHHHHHHHHHHhhhcCcccCHHHHHHHHhhhhCCccceeehhhhCCCceecccccCCcccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhHhcCCCcEeehHHHHHHHHHHHhhcCCCceeEEEEcCCCchhhhhhcccccCCceEEEEEecCCCCCCCCCCCCc
Q 017671          243 MLYFHSFRSPGLIIDIVQDIRAINGEAVHASPRKTGLIILGGGLPKHHICNANMMRNGADYAVFINTAQEFDGSDSGARP  322 (368)
Q Consensus       243 ~l~~~~~~~~~~~~D~v~D~~~l~~i~~~s~~~~~G~iilGGGVpKh~i~~~~l~r~G~DYaVqItta~e~dGslSGA~p  322 (368)
                      |||||++|.+++++|+|+|+++||.+++.+  .++|+|||||||+||||||+||||||+||+|||||+||||||+|||+|
T Consensus       244 mlyFHs~k~~~L~~DIv~Dir~iNt~av~a--~~tgmIIlGgGvvKHHI~NAnLmrNGad~~VyINtaqEfDGSDsGArp  321 (366)
T KOG2924|consen  244 MLYFHSFKNSGLVLDIVEDIRRINTEAVFA--NKTGMIILGGGVVKHHICNANLMRNGADYAVYINTAQEFDGSDSGARP  321 (366)
T ss_pred             eEEEeeccCCCeEEeHHHHHHhhhhhhhhc--cccceEEEcCchhhhhcchhhhhhcCcceEEEecccccccCcccCCCc
Confidence            999999999999999999999999999999  899999999999999999999999999999999999999999999999


Q ss_pred             cchhhcccccCCCCcEEEEeehhhhHHHHHHHHHhcccccccc
Q 017671          323 DEAVSWGKIRGSAKTVKVHCDATIAFPLLVAETFASRRNKFVE  365 (368)
Q Consensus       323 ~EAiSWGKi~~~a~~v~V~~DATIv~PLlva~~~~~~~~~~~~  365 (368)
                      +||||||||+++++.|+||+||||+|||||+++|+++.....+
T Consensus       322 DEAVSWGKir~~a~~VKvy~datlvfPLlVaeTFa~~~~~~~~  364 (366)
T KOG2924|consen  322 DEAVSWGKIRPDAKPVKVYADATLVFPLLVAETFAKKMDAFPK  364 (366)
T ss_pred             ccccccccccCCCceEEEEeeeeehhHHHHHHHHHhcCCcccC
Confidence            9999999999999999999999999999999999998765433

>PRK03971 putative deoxyhypusine synthase; Provisional	Back alignment and domain information

>TIGR00321 dhys deoxyhypusine synthase	Back alignment and domain information

>PRK01221 putative deoxyhypusine synthase; Provisional	Back alignment and domain information

>PRK02301 putative deoxyhypusine synthase; Provisional	Back alignment and domain information

>COG1899 DYS1 Deoxyhypusine synthase [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PRK00805 putative deoxyhypusine synthase; Provisional	Back alignment and domain information

>PRK02492 deoxyhypusine synthase-like protein; Provisional	Back alignment and domain information

>PF01916 DS: Deoxyhypusine synthase; InterPro: IPR002773 Eukaryotic initiation factor 5A (eIF-5A), now considered to be an elongation factor (see IPR001884 from INTERPRO), contains an unusual amino acid, hypusine [N epsilon-(4-aminobutyl-2-hydroxy)lysine]	Back alignment and domain information

>PRK00770 deoxyhypusine synthase-like protein; Provisional	Back alignment and domain information

>COG1915 Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>TIGR00300 conserved hypothetical protein TIGR00300	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		368
1rlz_A		369	Deoxyhypusine Synthase Holoenzyme In Its High Ionic		1e-135
1dhs_A		361	Crystal Structure Of The Nad Complex Of Human Deoxy		1e-135

>pdb|1RLZ|A Chain A, Deoxyhypusine Synthase Holoenzyme In Its High Ionic Strength, Low Ph Crystal Form Length = 369

Back alignment and structure

Iteration: 1

Score = 477 bits (1227), Expect = e-135, Method: Compositional matrix adjust. Identities = 221/356 (62%), Positives = 282/356 (79%), Gaps = 3/356 (0%) Query: 9 ASVHSTVFKESESLEGKGTKIEGYDFNQGVNYSQLLKSMVSTGFQASNFGDAIEVVNQML 68 A + V K S +L + T++ GYDFN+GVNY LL++ +TGFQA+NFG A++ VN M+ Sbjct: 11 AGALAAVLKHSSTLPPESTQVRGYDFNRGVNYRALLEAFGTTGFQATNFGRAVQQVNAMI 70 Query: 69 DWRLADEVIXXXXXXXXXXXXYRKSVRCKVFLGFTSNLISSGVRDTVRYLVQHHMVDVVV 128 + +L + + R C +FLG+TSNLISSG+R+T+RYLVQH+MVDV+V Sbjct: 71 EKKL-EPLSQDEDQHADLTQSRRPLTSCTIFLGYTSNLISSGIRETIRYLVQHNMVDVLV 129 Query: 129 TTAGGIEEDLVKCLAPTFKGDFALPGAYLRSKGLNRIGNLLVPNDNYCKFEDWIIPIFDQ 188 TTAGG+EEDL+KCLAPT+ G+F+L G LR G+NRIGNLLVPN+NYCKFEDW++PI DQ Sbjct: 130 TTAGGVEEDLIKCLAPTYLGEFSLRGKELRENGINRIGNLLVPNENYCKFEDWLMPILDQ 189 Query: 189 MLKEQNEEEISWTPSKVIARLGKEINDESSYLYWAYKNNIPVFCPGLTDGSLGDMLYFHS 248 M+ EQN E + WTPSK+IARLGKEIN+ S YWA KN+IPVF P LTDGSLGDM++FHS Sbjct: 190 MVMEQNTEGVKWTPSKMIARLGKEINNPESVYYWAQKNHIPVFSPALTDGSLGDMIFFHS 249 Query: 249 FRSPGLIIDIVQDIRAINGEAVHASPRKTGLIILGGGLPKHHICNANMMRNGADYAVFIN 308 +++PGL++DIV+D+R IN +A+ A + TG+IILGGG+ KHHI NAN+MRNGADYAV+IN Sbjct: 250 YKNPGLVLDIVEDLRLINTQAIFA--KCTGMIILGGGVVKHHIANANLMRNGADYAVYIN 307 Query: 309 TAQEFDGSDSGARPDEAVSWGKIRGSAKTVKVHCDATIAFPLLVAETFASRRNKFV 364 TAQEFDGSDSGARPDEAVSWGKIR A+ VKV+ DA++ FPLLVAETFA + + F+ Sbjct: 308 TAQEFDGSDSGARPDEAVSWGKIRVDAQPVKVYADASLVFPLLVAETFAQKMDAFM 363

PyMOL of 1rlz

>pdb|1DHS|A Chain A, Crystal Structure Of The Nad Complex Of Human Deoxyhypusine Synthase Length = 361

Back alignment and structure

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		368
1rlz_A		369	DHS, deoxyhypusine synthase; rossman fold, NAD cof	1e-138

>1rlz_A DHS, deoxyhypusine synthase; rossman fold, NAD cofactor, spermid transferase; HET: NAD; 2.15A {Homo sapiens} SCOP: c.31.1.1 PDB: 1roz_A* 1rqd_A* 1dhs_A* Length = 369	Back alignment and structure

 Score =  396 bits (1018), Expect = e-138
 Identities = 225/367 (61%), Positives = 286/367 (77%), Gaps = 5/367 (1%)

Query: 1   MEDNSN--VMASVHSTVFKESESLEGKGTKIEGYDFNQGVNYSQLLKSMVSTGFQASNFG 58
           ME +      A   + V K S +L  + T++ GYDFN+GVNY  LL++  +TGFQA+NFG
Sbjct: 1   MEGSLEREAPAGALAAVLKHSSTLPPESTQVRGYDFNRGVNYRALLEAFGTTGFQATNFG 60

Query: 59  DAIEVVNQMLDWRLADEVIPEDCDERERDPEYRKSVRCKVFLGFTSNLISSGVRDTVRYL 118
            A++ VN M++ +L      ED    +     R    C +FLG+TSNLISSG+R+T+RYL
Sbjct: 61  RAVQQVNAMIEKKLEPLSQDED-QHADLTQSRRPLTSCTIFLGYTSNLISSGIRETIRYL 119

Query: 119 VQHHMVDVVVTTAGGIEEDLVKCLAPTFKGDFALPGAYLRSKGLNRIGNLLVPNDNYCKF 178
           VQH+MVDV+VTTAGG+EEDL+KCLAPT+ G+F+L G  LR  G+NRIGNLLVPN+NYCKF
Sbjct: 120 VQHNMVDVLVTTAGGVEEDLIKCLAPTYLGEFSLRGKELRENGINRIGNLLVPNENYCKF 179

Query: 179 EDWIIPIFDQMLKEQNEEEISWTPSKVIARLGKEINDESSYLYWAYKNNIPVFCPGLTDG 238
           EDW++PI DQM+ EQN E + WTPSK+IARLGKEIN+  S  YWA KN+IPVF P LTDG
Sbjct: 180 EDWLMPILDQMVMEQNTEGVKWTPSKMIARLGKEINNPESVYYWAQKNHIPVFSPALTDG 239

Query: 239 SLGDMLYFHSFRSPGLIIDIVQDIRAINGEAVHASPRKTGLIILGGGLPKHHICNANMMR 298
           SLGDM++FHS+++PGL++DIV+D+R IN +A+ A  + TG+IILGGG+ KHHI NAN+MR
Sbjct: 240 SLGDMIFFHSYKNPGLVLDIVEDLRLINTQAIFA--KCTGMIILGGGVVKHHIANANLMR 297

Query: 299 NGADYAVFINTAQEFDGSDSGARPDEAVSWGKIRGSAKTVKVHCDATIAFPLLVAETFAS 358
           NGADYAV+INTAQEFDGSDSGARPDEAVSWGKIR  A+ VKV+ DA++ FPLLVAETFA 
Sbjct: 298 NGADYAVYINTAQEFDGSDSGARPDEAVSWGKIRVDAQPVKVYADASLVFPLLVAETFAQ 357

Query: 359 RRNKFVE 365
           + + F+ 
Sbjct: 358 KMDAFMH 364

PyMOL of 1rlz

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		368
1rlz_A		369	DHS, deoxyhypusine synthase; rossman fold, NAD cof	100.0
3c2q_A		345	Uncharacterized conserved protein; putative LOR/SD	91.7

>1rlz_A DHS, deoxyhypusine synthase; rossman fold, NAD cofactor, spermid transferase; HET: NAD; 2.15A {Homo sapiens} SCOP: c.31.1.1 PDB: 1roz_A* 1rqd_A* 1dhs_A*	Back alignment and structure

Probab=100.00  E-value=2.9e-131  Score=976.33  Aligned_cols=358  Identities=62%  Similarity=1.067  Sum_probs=329.8

Q ss_pred             CcccccccccccccccccCCCCCccccccccCCCCCHHHHHHHHhhcCcccccHHHHHHHHHHHHhccccCCCCCccccc
Q 017671            4 NSNVMASVHSTVFKESESLEGKGTKIEGYDFNQGVNYSQLLKSMVSTGFQASNFGDAIEVVNQMLDWRLADEVIPEDCDE   83 (368)
Q Consensus         4 ~~~~~~~~~~avl~~s~~~~~~~~~V~g~d~~~~~~~~~L~~~~~~~GFqA~~l~~A~~i~~~M~~~~~~d~~~~~~~~~   83 (368)
                      +...|+.|+++||++|++++....+|+|+||++++++++|+++|.+|||||++|++|++|+++|++||+++.  .|+.++
T Consensus         6 ~~~~~~~~~~~v~~~s~~~~~~~~~V~g~d~~~~~~~~~Ll~s~~~~GFqA~~Lg~Ai~ii~~Ml~~r~~~~--~~~~~~   83 (369)
T 1rlz_A            6 EREAPAGALAAVLKHSSTLPPESTQVRGYDFNRGVNYRALLEAFGTTGFQATNFGRAVQQVNAMIEKKLEPL--SQDEDQ   83 (369)
T ss_dssp             ---CCHHHHHHHTCCCCCCCTTCCCCCCCCGGGCCCHHHHHHGGGGTCHHHHHHHHHHHHHHHHHHHHTCCC--------
T ss_pred             cccCchhhhhCeEecccCCCCCCCeeeccccCCCCCHHHHHHHHHhcCcchHHHHHHHHHHHHHHHhhccCc--cccccc
Confidence            445678899999999999998888999999999999999999999999999999999999999999997653  355666


Q ss_pred             ccC-CccccccccceEEEccccccchhhhHHHHHHHHhcCceeEEEeCCCchhHHHHHhhcCccccCCCCCchhHHhCCC
Q 017671           84 RER-DPEYRKSVRCKVFLGFTSNLISSGVRDTVRYLVQHHMVDVVVTTAGGIEEDLVKCLAPTFKGDFALPGAYLRSKGL  162 (368)
Q Consensus        84 ~~~-~~~~~~~~~~tIfL~~tgnmvssGlr~~i~~Li~~~~VD~IVtTgg~lehDi~~~l~~~y~G~~~~dd~~Lr~~gi  162 (368)
                      +++ +++.|++.+|||||||||||+|||||++|++|||+|||||||||||||||||+||||+||+|+|.+||.+||++||
T Consensus        84 ~~~~d~~~~~~~~~tIFLg~tgnmissGlR~iI~~Li~~~~VDvIVTTgggiehD~ik~lg~~y~G~f~~dd~~Lr~~gi  163 (369)
T 1rlz_A           84 HADLTQSRRPLTSCTIFLGYTSNLISSGIRETIRYLVQHNMVDVLVTTAGGVEEDLIKCLAPTYLGEFSLRGKELRENGI  163 (369)
T ss_dssp             -----------CSSEEEEEECTHHHHSTHHHHHHHHHHTTCCSEEEECHHHHHHHHHTTTSCCEECCTTCCHHHHHHTTE
T ss_pred             cccccchhcccCCCeEEEEccccccchhHHHHHHHHHHcCCeeEEEccCCchHHHHHHHhccceecCCCCChHHHHHcCC
Confidence            666 7889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cceeeeeecCccHHHHHHHHHHHHHHHHHhhcccCcccCHHHHHHHhccccCCCchHHHHHHHCCCceecCCCCchhHHH
Q 017671          163 NRIGNLLVPNDNYCKFEDWIIPIFDQMLKEQNEEEISWTPSKVIARLGKEINDESSYLYWAYKNNIPVFCPGLTDGSLGD  242 (368)
Q Consensus       163 nRigdv~ip~e~y~~~E~~i~~il~~l~~~q~~~~~~~t~~e~~~~lG~~i~~e~Sil~~A~k~~VPVf~Pa~tDgsiG~  242 (368)
                      ||||||||||++||+||+||++||++|+++|+.++..|||+||+++||++|++|+||||||||||||||||||+|||+|+
T Consensus       164 nRIgn~~ip~e~y~~~E~~i~~i~~~~~~~q~~~~~~~s~~e~i~~lGk~i~~e~Sil~~Ayk~~VPVf~Pa~tDgsiG~  243 (369)
T 1rlz_A          164 NRIGNLLVPNENYCKFEDWLMPILDQMVMEQNTEGVKWTPSKMIARLGKEINNPESVYYWAQKNHIPVFSPALTDGSLGD  243 (369)
T ss_dssp             EEETTEEEETHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHCCTTCHHHHHHHTTCCEECTTTTSSHHHH
T ss_pred             CcccceeeccHHHHHHHHHHHHHHHHHHHhhhccCCcCcHHHHHHHHhhhcCCCCcHHHHHHHcCCCEECCCcchhhHHH
Confidence            99999999999999999999999999998887777899999999999999999999999999999999999999999999


Q ss_pred             HHHHhHhcCCCcEeehHHHHHHHHHHHhhcCCCceeEEEEcCCCchhhhhhcccccCCceEEEEEecCCCCCCCCCCCCc
Q 017671          243 MLYFHSFRSPGLIIDIVQDIRAINGEAVHASPRKTGLIILGGGLPKHHICNANMMRNGADYAVFINTAQEFDGSDSGARP  322 (368)
Q Consensus       243 ~l~~~~~~~~~~~~D~v~D~~~l~~i~~~s~~~~~G~iilGGGVpKh~i~~~~l~r~G~DYaVqItta~e~dGslSGA~p  322 (368)
                      |+|+|+++++++++|+++|+++|+++++++  +++|+|||||||||||||||||+|+|+|||||||||+|+|||||||||
T Consensus       244 ~l~~~~~~~~~l~iD~v~Di~~l~~~~~~a--~ktG~iilGGGvpKh~i~~a~l~r~G~dyaV~Itta~e~dGslSGA~p  321 (369)
T 1rlz_A          244 MIFFHSYKNPGLVLDIVEDLRLINTQAIFA--KCTGMIILGGGVVKHHIANANLMRNGADYAVYINTAQEFDGSDSGARP  321 (369)
T ss_dssp             HHHHHHHHSTTCCCCSHHHHHHHHHHHHTC--SSEEEEEESCHHHHHHHHHHHHTTTSBSEEEEEECCCSTTCCSTTCCH
T ss_pred             HHHHHhccCCceeeehHhhHHHHHHHHHhc--ccceEEEECCCcchHHHHhhhcccCCCCEEEEEecCCCCcCcccCCCh
Confidence            999999998899999999999999999999  999999999999999999999999999999999999999999999999


Q ss_pred             cchhhcccccCCCCcEEEEeehhhhHHHHHHHHHhcccccccc
Q 017671          323 DEAVSWGKIRGSAKTVKVHCDATIAFPLLVAETFASRRNKFVE  365 (368)
Q Consensus       323 ~EAiSWGKi~~~a~~v~V~~DATIv~PLlva~~~~~~~~~~~~  365 (368)
                      +||||||||+++++.|+|||||||+||||++++|++..+++++
T Consensus       322 ~EAvSWGKi~~~a~~v~V~~DATIv~PLlva~~~~~~~~~~~~  364 (369)
T 1rlz_A          322 DEAVSWGKIRVDAQPVKVYADASLVFPLLVAETFAQKMDAFMH  364 (369)
T ss_dssp             HHHHHHTSBCTTCCCEEEESCHHHHHHHHHHHTGGGGHHHHHH
T ss_pred             hhhhccccccCCCCeEEEEEeehHHHHHHHHHHHHhhhhcccc
Confidence            9999999999999999999999999999999999998876654

PyMOL of 1rlz

>3c2q_A Uncharacterized conserved protein; putative LOR/SDH, structural genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis S2}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		368
d1dhsa_		361	c.31.1.1 (A:) Deoxyhypusine synthase, DHS {Human (	1e-174

>d1dhsa_ c.31.1.1 (A:) Deoxyhypusine synthase, DHS {Human (Homo sapiens) [TaxId: 9606]} Length = 361	Back information, alignment and structure


class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Deoxyhypusine synthase, DHS
domain: Deoxyhypusine synthase, DHS
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  487 bits (1256), Expect = e-174
 Identities = 223/357 (62%), Positives = 283/357 (79%), Gaps = 3/357 (0%)

Query: 9   ASVHSTVFKESESLEGKGTKIEGYDFNQGVNYSQLLKSMVSTGFQASNFGDAIEVVNQML 68
           A   + V K S +L  + T++ GYDFN+GVNY  LL++  +TGFQA+NFG A++ VN M+
Sbjct: 3   AGALAAVLKHSSTLPPESTQVRGYDFNRGVNYRALLEAFGTTGFQATNFGRAVQQVNAMI 62

Query: 69  DWRLADEVIPEDCDERERDPEYRKSVRCKVFLGFTSNLISSGVRDTVRYLVQHHMVDVVV 128
           + +L      ED    +     R    C +FLG+TSNLISSG+R+T+RYLVQH+MVDV+V
Sbjct: 63  EKKLEPLSQDED-QHADLTQSRRPLTSCTIFLGYTSNLISSGIRETIRYLVQHNMVDVLV 121

Query: 129 TTAGGIEEDLVKCLAPTFKGDFALPGAYLRSKGLNRIGNLLVPNDNYCKFEDWIIPIFDQ 188
           TTAGG+EEDL+KCLAPT+ G+F+L G  LR  G+NRIGNLLVPN+NYCKFEDW++PI DQ
Sbjct: 122 TTAGGVEEDLIKCLAPTYLGEFSLRGKELRENGINRIGNLLVPNENYCKFEDWLMPILDQ 181

Query: 189 MLKEQNEEEISWTPSKVIARLGKEINDESSYLYWAYKNNIPVFCPGLTDGSLGDMLYFHS 248
           M+ EQN E + WTPSK+IARLGKEIN+  S  YWA KN+IPVF P LTDGSLGDM++FHS
Sbjct: 182 MVMEQNTEGVKWTPSKMIARLGKEINNPESVYYWAQKNHIPVFSPALTDGSLGDMIFFHS 241

Query: 249 FRSPGLIIDIVQDIRAINGEAVHASPRKTGLIILGGGLPKHHICNANMMRNGADYAVFIN 308
           +++PGL++DIV+D+R IN +A+ A  + TG+IILGGG+ KHHI NAN+MRNGADYAV+IN
Sbjct: 242 YKNPGLVLDIVEDLRLINTQAIFA--KCTGMIILGGGVVKHHIANANLMRNGADYAVYIN 299

Query: 309 TAQEFDGSDSGARPDEAVSWGKIRGSAKTVKVHCDATIAFPLLVAETFASRRNKFVE 365
           TAQEFDGSDSGARPDEAVSWGKIR  A+ VKV+ DA++ FPLLVAETFA + + F+ 
Sbjct: 300 TAQEFDGSDSGARPDEAVSWGKIRVDAQPVKVYADASLVFPLLVAETFAQKMDAFMH 356

PyMOL of d1dhsa_

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		368
d1dhsa_		361	Deoxyhypusine synthase, DHS {Human (Homo sapiens)	100.0

>d1dhsa_ c.31.1.1 (A:) Deoxyhypusine synthase, DHS {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Deoxyhypusine synthase, DHS
domain: Deoxyhypusine synthase, DHS
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-128  Score=954.51  Aligned_cols=357  Identities=62%  Similarity=1.057  Sum_probs=331.5

Q ss_pred             cccccccccccccccCCCCCccccccccCCCCCHHHHHHHHhhcCcccccHHHHHHHHHHHHhccccCCCCCcccccccC
Q 017671            7 VMASVHSTVFKESESLEGKGTKIEGYDFNQGVNYSQLLKSMVSTGFQASNFGDAIEVVNQMLDWRLADEVIPEDCDERER   86 (368)
Q Consensus         7 ~~~~~~~avl~~s~~~~~~~~~V~g~d~~~~~~~~~L~~~~~~~GFqA~~l~~A~~i~~~M~~~~~~d~~~~~~~~~~~~   86 (368)
                      .|+.|.+|||++|+++|++..+|+||||++++++++||++|++||||||||++|++|+++|++||+++.+..+ +.+.+.
T Consensus         1 ~p~~a~~~v~~~s~~~p~~~~~V~g~df~~~~~~~~ll~~~~~~GFqA~~Lg~A~~i~~~Mi~~~~~~~~~~~-~~~~~~   79 (361)
T d1dhsa_           1 APAGALAAVLKHSSTLPPESTQVRGYDFNRGVNYRALLEAFGTTGFQATNFGRAVQQVNAMIEKKLEPLSQDE-DQHADL   79 (361)
T ss_dssp             CCHHHHHHHSCCCCCCCTTCCCCCCCCGGGCCCHHHHHHGGGGTCHHHHHHHHHHHHHHHHHHHHTCCC-----------
T ss_pred             CchhhhhcceecCCCCCCCCCeeeCCCCCCCCCHHHHHHHHHHhCccHHHHHHHHHHHHHHHHhhccCCcccc-cccccc
Confidence            3788999999999999999999999999999999999999999999999999999999999999985433223 334567


Q ss_pred             CccccccccceEEEccccccchhhhHHHHHHHHhcCceeEEEeCCCchhHHHHHhhcCccccCCCCCchhHHhCCCccee
Q 017671           87 DPEYRKSVRCKVFLGFTSNLISSGVRDTVRYLVQHHMVDVVVTTAGGIEEDLVKCLAPTFKGDFALPGAYLRSKGLNRIG  166 (368)
Q Consensus        87 ~~~~~~~~~~tIfL~~tgnmvssGlr~~i~~Li~~~~VD~IVtTgg~lehDi~~~l~~~y~G~~~~dd~~Lr~~ginRig  166 (368)
                      +++.|++.+|||||||||||+|||||++|++|||+||||+|||||||||||++||+|+||+|+|.+||.+||++|+||||
T Consensus        80 ~~~~~~~~~ctIfLt~agam~saGlr~~i~~LIr~g~Vd~IVtTga~lehDi~~~~g~~y~g~f~~dd~~Lr~~ginRIg  159 (361)
T d1dhsa_          80 TQSRRPLTSCTIFLGYTSNLISSGIRETIRYLVQHNMVDVLVTTAGGVEEDLIKCLAPTYLGEFSLRGKELRENGINRIG  159 (361)
T ss_dssp             -------CSSEEEEEECTHHHHSTHHHHHHHHHHTTCCSEEEECHHHHHHHHHTTTSCCEECCTTCCHHHHHHTTEEEET
T ss_pred             cchhcccccceEEEecccccchhhHHHHHHHHHHcCCCCEEEecCCcchHHHHHHhCccccCcccCChHHHhhcCccccc
Confidence            88899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeecCccHHHHHHHHHHHHHHHHHhhcccCcccCHHHHHHHhccccCCCchHHHHHHHCCCceecCCCCchhHHHHHHH
Q 017671          167 NLLVPNDNYCKFEDWIIPIFDQMLKEQNEEEISWTPSKVIARLGKEINDESSYLYWAYKNNIPVFCPGLTDGSLGDMLYF  246 (368)
Q Consensus       167 dv~ip~e~y~~~E~~i~~il~~l~~~q~~~~~~~t~~e~~~~lG~~i~~e~Sil~~A~k~~VPVf~Pa~tDgsiG~~l~~  246 (368)
                      ||||||++|+.+|+|+++++++|.++|+..+.+|||+||+++||++|++++||||||||||||||||||+|||+|+++|+
T Consensus       160 dv~Ipee~~~~~e~~i~~il~~~~~e~~~~~~~~~~~e~i~~lg~~i~~~~Sil~~A~~~~vPVf~Pa~~DssiG~~l~~  239 (361)
T d1dhsa_         160 NLLVPNENYCKFEDWLMPILDQMVMEQNTEGVKWTPSKMIARLGKEINNPESVYYWAQKNHIPVFSPALTDGSLGDMIFF  239 (361)
T ss_dssp             TEEEETHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHCCTTCHHHHHHHTTCCEECTTTTSSHHHHHHHH
T ss_pred             ceeeCHHHHHHHHHHHHHHHHHHHHHhhccCCccchHHHHHHHHhccCCcchHHHHHHHhCCCeecCCcchhhHHHHHHH
Confidence            99999999999999999999999999988889999999999999999999999999999999999999999999999999


Q ss_pred             hHhcCCCcEeehHHHHHHHHHHHhhcCCCceeEEEEcCCCchhhhhhcccccCCceEEEEEecCCCCCCCCCCCCccchh
Q 017671          247 HSFRSPGLIIDIVQDIRAINGEAVHASPRKTGLIILGGGLPKHHICNANMMRNGADYAVFINTAQEFDGSDSGARPDEAV  326 (368)
Q Consensus       247 ~~~~~~~~~~D~v~D~~~l~~i~~~s~~~~~G~iilGGGVpKh~i~~~~l~r~G~DYaVqItta~e~dGslSGA~p~EAi  326 (368)
                      |+++++++.+|+++|+++|+++++++  +++|+|||||||||||+||+||+|+|+||+|||||++|+|||||||||+|||
T Consensus       240 ~~~~~~~~~iD~~~D~~~l~~~~~~~--~~~G~i~iGGGvpKh~i~~~~l~r~g~dyavqItta~~~dGslSGA~p~Eai  317 (361)
T d1dhsa_         240 HSYKNPGLVLDIVEDLRLINTQAIFA--KCTGMIILGGGVVKHHIANANLMRNGADYAVYINTAQEFDGSDSGARPDEAV  317 (361)
T ss_dssp             HHHHSTTCCCCSHHHHHHHHHHHHTC--SSEEEEEESCTHHHHHHHHHHHTTTSBSEEEEECCCCSTTCCSTTCCHHHHH
T ss_pred             HHhcCCCceeeHHHHHHHHHHHHHhc--cCcceEEEeCCcccHHHHhhhhhcCCCCEEEEEeCCCCCcCcccCCCccccc
Confidence            99999999999999999999999999  9999999999999999999999999999999999999999999999999999


Q ss_pred             hcccccCCCCcEEEEeehhhhHHHHHHHHHhccccccccc
Q 017671          327 SWGKIRGSAKTVKVHCDATIAFPLLVAETFASRRNKFVET  366 (368)
Q Consensus       327 SWGKi~~~a~~v~V~~DATIv~PLlva~~~~~~~~~~~~~  366 (368)
                      |||||+++++.|+|||||||+||||++++|+|+.+++|++
T Consensus       318 SWGKi~~~a~~v~V~~DATIv~PLl~a~~~~k~~~~~~~~  357 (361)
T d1dhsa_         318 SWGKIRVDAQPVKVYADASLVFPLLVAETFAQKMDAFMHE  357 (361)
T ss_dssp             HHTSBCTTCCCEEECSCHHHHHHHHHHHTGGGGHHHHHHH
T ss_pred             ccCccCCCCCcEEEEeeHHHHHHHHHHHHHHhhhhccccc
Confidence            9999999999999999999999999999999998776554

PyMOL of d1dhsa_