Citrus Sinensis ID: 017782

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360------
Protein Sequence
MAWWSSASASSTFNSSFLLRSSLSSYSNKKLSSNHVAHAPPSLFSPYITINSFKKRCIIVTNCTTTNKKNMESSSTVDCVETGTDVECLISPTDKEEIEQEQVEQDGQVMELGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGSV
Secondary Structure (PSIPRED)
cccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccEEEEEEccccccccccccccccccccccccEEEcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHcccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccc
Secondary Structure Prediction (SSPRO)
cccEEcccccccccccEccccccccccccEEEccccccccccccccEEEEccccEEEEEEEEEcccccccccccccccEcccccEEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
mawwssasasstfnsSFLLRSSlssysnkklssnhvahappslfspyitinsfKKRCIIVTNCtttnkknmessstvdcvetgtdveclisptdkeEIEQEQVEQDGQVMELGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFAssqgrklpsgfNAWVSIFLFALVDASCFQGFLAQGLqrtsaglgsapafdesnsslwgsGEWWMLLAAQSMAVGTVMVRWVSkysdpvmatgwHMVIGGLPLMVISVLnhdpvygesvkeLTSSDILALLYTSIFGSAISYGVYFYsatkgsltklssltfltpMFASIFGFLylgetfsplqlVGAAVTVVAIYLVNFRGSV
Flexible Loop (DISEMBL)
mawwssasasstfnsSFLLRSSLSSYSNKKLSSNHvahappslfspyitINSFKKRCIIVTNCtttnkknmessstvdcvetgTDVECLISPTDKEEIEQEQVEQDGQVMELGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGSV
Low Complexity Region (SEG)
MawwssasasstfnssfllrsslssysnkklssNHVAHAPPSLFSPYITINSFKKRCIIVTNCTTTNKKNMESSSTVDCVETGTDVECLISPTDKEEIEQEQVEQDGQVMELGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYsatkgsltklssltfltPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGSV
Disordered region (IsUnstruct)
*****************************************SLFSPYITINSFKKRCIIVTNCTTTN*********VDCVETGTDVECLI*****************QVMELGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGL**********SSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF****
Disordered Region (DISOPRED)
********AS***NSSFLLRSSLS***N*K***NHVAHAPPSLFSPYITINSFK*************************VETGTDVEC****************************EWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG**
Disordered Region (DISEMBL)
*************NSSFLLRSSLSSYSNKKLSSNHVAHAPPSLFSPYITINSFKKRCIIVTNCTTTNKK*********CVETGTDVECLISPTDK*********QDGQVMELGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGSV
Disordered Region (DISPRO)
******************LRSSLSSYSNKKLSSNHVAHAPPSLFSPYITINSFKKRCIIVTNCTTTN*****SSSTVDCVETGTDVECLISPT***************VMELGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGSV
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAWWSSASASSTFNSSFLLRSSLSSYSNKKLSSNHVAHAPPSLFSPYITINSFKKRCIIVTNCTTTNKKNMESSSTVDCVETGTDVECLISPTDKEEIEQEQVEQDGQVMELGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGSV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	366	2.2.26 [Sep-21-2011]
Q93V85	417	WAT1-related protein At3g	yes	no	0.767	0.673	0.659	1e-116
P74436	330	Uncharacterized transport	N/A	no	0.653	0.724	0.444	3e-54
O34416	292	Uncharacterized transport	yes	no	0.366	0.458	0.253	0.0005
P0AA70	306	Uncharacterized inner mem	N/A	no	0.527	0.630	0.297	0.0005
P0AA71	306	Uncharacterized inner mem	yes	no	0.527	0.630	0.297	0.0005
P0AA72	306	Uncharacterized inner mem	N/A	no	0.527	0.630	0.297	0.0005
O29740	289	Uncharacterized transport	yes	no	0.188	0.238	0.347	0.0007

>sp|Q93V85|WTR16_ARATH WAT1-related protein At3g02690, chloroplastic OS=Arabidopsis thaliana GN=At3g02690 PE=1 SV=1

 Score =  417 bits (1072), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 217/329 (65%), Positives = 245/329 (74%), Gaps = 48/329 (14%)

Query: 77  VDCVETGTDVECLISPTDKEEIEQEQVEQDGQVMELGMLLEWAVLVSPFFFWGTAMVAMK 136
           VDCV  G+DVEC ++  + EE     +   G+    G  LEW VL+SPFFFWGTAMVAMK
Sbjct: 89  VDCVGMGSDVEC-VNNGEDEENRSSGILSGGE----GTFLEWTVLISPFFFWGTAMVAMK 143

Query: 137 EVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLA 196
           EVLP  G FFVAAFRLIPAGLLL+ FA  +GR LP G NAW SI LFALVDA+CFQGFLA
Sbjct: 144 EVLPITGPFFVAAFRLIPAGLLLVAFAVYKGRPLPEGINAWFSIALFALVDATCFQGFLA 203

Query: 197 QGLQRTSAGLGSA-----------------------------------------PAF--D 213
           QGLQRTSAGLGS                                          P+   D
Sbjct: 204 QGLQRTSAGLGSVIIDSQPLTVAVLASFLFGESIGIVRAGGLLLGVAGLLLLEVPSVTSD 263

Query: 214 ESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNH 273
            +N SLWGSGEWWMLLAAQSMA+GTVMVRWVSKYSDP+MATGWHMVIGGLPL+ ISV+NH
Sbjct: 264 GNNFSLWGSGEWWMLLAAQSMAIGTVMVRWVSKYSDPIMATGWHMVIGGLPLLAISVINH 323

Query: 274 DPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIF 333
           DPV+  S+++L+++D++ALLYTSIFGSA+SYGVYFYSATKGSLTKLSSLTFLTPMFASIF
Sbjct: 324 DPVFNGSLQDLSTNDVIALLYTSIFGSAVSYGVYFYSATKGSLTKLSSLTFLTPMFASIF 383

Query: 334 GFLYLGETFSPLQLVGAAVTVVAIYLVNF 362
           G+LYL ETFS LQLVGAAVT+VAIYLVNF
Sbjct: 384 GYLYLNETFSSLQLVGAAVTLVAIYLVNF 412

Arabidopsis thaliana (taxid: 3702)

>sp|P74436|Y355_SYNY3 Uncharacterized transporter sll0355 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0355 PE=3 SV=1

 Score =  212 bits (540), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 132/297 (44%), Positives = 168/297 (56%), Gaps = 58/297 (19%)

Query: 121 LVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSI 180
           L++PFF WGTAMVAMK VL     FFVA  RLIPAG+L++ +A  Q R  P  +  W  I
Sbjct: 17  LIAPFFLWGTAMVAMKGVLADTTPFFVATVRLIPAGILVLLWAMGQKRPQPQNWQGWGWI 76

Query: 181 FLFALVDASCFQGFLAQGL--------------QRTSAGLGSAPAFDE------------ 214
            LFALVD + FQGFLAQGL              Q  +  L S+  F E            
Sbjct: 77  ILFALVDGTLFQGFLAQGLERTGAGLGSVIIDSQPIAVALLSSWLFKEVIGGIGWLGLLL 136

Query: 215 ----------------------------SNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSK 246
                                       S S+L  SGE WMLLA+ SMAVGTV++ +VS+
Sbjct: 137 GVGGISLIGLPDEWFYQLWHLQGLSINWSGSALGSSGELWMLLASLSMAVGTVLIPFVSR 196

Query: 247 YSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGV 306
             DPV+ATGWHM+IGGLPL+ I+++       E  + +       L Y ++FGSAI+YG+
Sbjct: 197 RVDPVVATGWHMIIGGLPLLAIALVQDS----EPWQNIDLWGWGNLAYATVFGSAIAYGI 252

Query: 307 YFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFR 363
           +FY A+KG+LT LSSLTFLTP+FA  F  L L E  S LQ +G A T+V+IYL+N R
Sbjct: 253 FFYLASKGNLTSLSSLTFLTPIFALSFSNLILEEQLSSLQWLGVAFTLVSIYLINQR 309

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

>sp|O34416|YOAV_BACSU Uncharacterized transporter YoaV OS=Bacillus subtilis (strain 168) GN=yoaV PE=3 SV=1

 Score = 45.8 bits (107), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 68/142 (47%), Gaps = 8/142 (5%)

Query: 223 GEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESV- 281
           GE  +L+AA S  +  V  +   K+ D +    WH+++G + L+V S +       E+V 
Sbjct: 150 GELCVLVAALSWGIANVFSKLQFKHIDIIHMNAWHLMMGAVMLLVFSFIF------EAVP 203

Query: 282 -KELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGE 340
             E T   + +LL+  +  +  ++ V+F+   +   +K S      P+ A  FG+L L E
Sbjct: 204 SAEWTYQAVWSLLFNGLLSTGFTFVVWFWVLNQIQASKASMALMFVPVLALFFGWLQLHE 263

Query: 341 TFSPLQLVGAAVTVVAIYLVNF 362
             +   ++GA +    I++  F
Sbjct: 264 QITINIILGALLICCGIFMNTF 285

Bacillus subtilis (strain 168) (taxid: 224308)

>sp|P0AA70|YEDA_ECOLI Uncharacterized inner membrane transporter YedA OS=Escherichia coli (strain K12) GN=yedA PE=1 SV=1

 Score = 45.8 bits (107), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 100/212 (47%), Gaps = 19/212 (8%)

Query: 159 LITFASSQGRKLPSGFNAWV--SIFLFALVDASCFQGFLAQGLQRTSAGLGSAPAFD-ES 215
           ++T A  Q   +PSG  A V  ++ LF L  +  F G   + L+     +G A      S
Sbjct: 85  MVTVAEHQ--NVPSGIAAVVVATVPLFTLCFSRLF-GIKTRKLEWVGIAIGLAGIIMLNS 141

Query: 216 NSSLWGS--GEWWMLLAAQSMAVGTVMVRWVSKYSDPV--MATGWHMVIGGLPLMVISVL 271
             +L G+  G   +L+ + S A G+V   + S+ + PV  MA    M+  G+ LM+ S+ 
Sbjct: 142 GGNLSGNPWGAILILIGSISWAFGSV---YGSRITLPVGMMAGAIEMLAAGVVLMIASM- 197

Query: 272 NHDPVYGESVKELTS-SDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFA 330
               + GE +  L S S  LA+ Y ++FGS I+   Y Y     S    +S  ++ P+ A
Sbjct: 198 ----IAGEKLTALPSLSGFLAVGYLALFGSIIAINAYMYLIRNVSPALATSYAYVNPVVA 253

Query: 331 SIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF 362
            + G    GET S ++ +   V V A+ LV  
Sbjct: 254 VLLGTGLGGETLSKIEWLALGVIVFAVVLVTL 285

Escherichia coli (strain K12) (taxid: 83333)

>sp|P0AA71|YEDA_ECOL6 Uncharacterized inner membrane transporter YedA OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=yedA PE=3 SV=1

 Score = 45.8 bits (107), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 100/212 (47%), Gaps = 19/212 (8%)

Query: 159 LITFASSQGRKLPSGFNAWV--SIFLFALVDASCFQGFLAQGLQRTSAGLGSAPAFD-ES 215
           ++T A  Q   +PSG  A V  ++ LF L  +  F G   + L+     +G A      S
Sbjct: 85  MVTVAEHQ--NVPSGIAAVVVATVPLFTLCFSRLF-GIKTRKLEWVGIAIGLAGIIMLNS 141

Query: 216 NSSLWGS--GEWWMLLAAQSMAVGTVMVRWVSKYSDPV--MATGWHMVIGGLPLMVISVL 271
             +L G+  G   +L+ + S A G+V   + S+ + PV  MA    M+  G+ LM+ S+ 
Sbjct: 142 GGNLSGNPWGAILILIGSISWAFGSV---YGSRITLPVGMMAGAIEMLAAGVVLMIASM- 197

Query: 272 NHDPVYGESVKELTS-SDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFA 330
               + GE +  L S S  LA+ Y ++FGS I+   Y Y     S    +S  ++ P+ A
Sbjct: 198 ----IAGEKLTALPSLSGFLAVGYLALFGSIIAINAYMYLIRNVSPALATSYAYVNPVVA 253

Query: 331 SIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF 362
            + G    GET S ++ +   V V A+ LV  
Sbjct: 254 VLLGTGLGGETLSKIEWLALGVIVFAVVLVTL 285

Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) (taxid: 199310)

>sp|P0AA72|YEDA_ECO57 Uncharacterized inner membrane transporter YedA OS=Escherichia coli O157:H7 GN=yedA PE=3 SV=1

 Score = 45.8 bits (107), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 100/212 (47%), Gaps = 19/212 (8%)

Query: 159 LITFASSQGRKLPSGFNAWV--SIFLFALVDASCFQGFLAQGLQRTSAGLGSAPAFD-ES 215
           ++T A  Q   +PSG  A V  ++ LF L  +  F G   + L+     +G A      S
Sbjct: 85  MVTVAEHQ--NVPSGIAAVVVATVPLFTLCFSRLF-GIKTRKLEWVGIAIGLAGIIMLNS 141

Query: 216 NSSLWGS--GEWWMLLAAQSMAVGTVMVRWVSKYSDPV--MATGWHMVIGGLPLMVISVL 271
             +L G+  G   +L+ + S A G+V   + S+ + PV  MA    M+  G+ LM+ S+ 
Sbjct: 142 GGNLSGNPWGAILILIGSISWAFGSV---YGSRITLPVGMMAGAIEMLAAGVVLMIASM- 197

Query: 272 NHDPVYGESVKELTS-SDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFA 330
               + GE +  L S S  LA+ Y ++FGS I+   Y Y     S    +S  ++ P+ A
Sbjct: 198 ----IAGEKLTALPSLSGFLAVGYLALFGSIIAINAYMYLIRNVSPALATSYAYVNPVVA 253

Query: 331 SIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF 362
            + G    GET S ++ +   V V A+ LV  
Sbjct: 254 VLLGTGLGGETLSKIEWLALGVIVFAVVLVTL 285

Escherichia coli O157:H7 (taxid: 83334)

>sp|O29740|Y510_ARCFU Uncharacterized transporter AF_0510 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=AF_0510 PE=3 SV=1

 Score = 45.4 bits (106), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 37/69 (53%)

Query: 291 ALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGA 350
           ALLY SI  S  +Y V++Y+ T    T ++   +L P+F +IF F  L E       +G 
Sbjct: 214 ALLYLSILCSVFAYVVWYYALTNADSTSVAVYVYLVPLFTAIFAFYALNEKPDFFTAIGG 273

Query: 351 AVTVVAIYL 359
            +T+  +YL
Sbjct: 274 IITIAGVYL 282

Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) (taxid: 224325)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	366
297828730	424	integral membrane family protein [Arabid	0.923	0.797	0.609	1e-118
255579425	475	Protein pecM, putative [Ricinus communis	0.950	0.732	0.582	1e-118
356569422	412	PREDICTED: uncharacterized transporter s	0.967	0.859	0.582	1e-117
356537734	412	PREDICTED: uncharacterized transporter s	0.814	0.723	0.648	1e-115
18396278	417	nodulin MtN21 /EamA-like transporter pro	0.767	0.673	0.659	1e-114
6957732	432	unknown protein [Arabidopsis thaliana]	0.767	0.650	0.630	1e-111
147815348	365	hypothetical protein VITISV_042981 [Viti	0.680	0.682	0.744	1e-110
449445186	424	PREDICTED: uncharacterized transporter s	0.846	0.731	0.607	1e-110
225466171	382	PREDICTED: uncharacterized transporter s	0.691	0.662	0.699	1e-110
242039249	415	hypothetical protein SORBIDRAFT_01g01839	0.789	0.696	0.558	1e-105

>gi|297828730|ref|XP_002882247.1| integral membrane family protein [Arabidopsis lyrata subsp. lyrata] gi|297328087|gb|EFH58506.1| integral membrane family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 240/394 (60%), Positives = 278/394 (70%), Gaps = 56/394 (14%)

Query: 20  RSSLSSYSNKKLSSNHVAHAPPSLF-SPYITINSFKKRC---IIVTNCTTTNKKNMESSS 75
           R + SS +NK  S+  V     S F S +I ++ FK+R     +V   TT+NK   E+ S
Sbjct: 31  RRANSSCANKYPSNILVKSLRHSRFDSKHILVSIFKRRINGDSVVRRSTTSNKSTEETES 90

Query: 76  T----VDCVETGTDVECLISPTDKEEIEQEQVEQDGQVMELGMLLEWAVLVSPFFFWGTA 131
           +    VDCV  G+DVEC+ +  D EE     +   G+    G LLEW VL+SPFFFWGTA
Sbjct: 91  SSSSSVDCVGMGSDVECVYNGED-EENRSSGILNGGE----GTLLEWTVLISPFFFWGTA 145

Query: 132 MVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCF 191
           MVAMKEVLP  G FFVAAFRLIPAGLLL+ FA  + R LP G NAW+SI LFALVDA+CF
Sbjct: 146 MVAMKEVLPITGPFFVAAFRLIPAGLLLVAFAVYKARPLPKGINAWLSIALFALVDATCF 205

Query: 192 QGFLAQGLQRTSAGLGSA-----------------------------------------P 210
           QGFLAQGLQRTSAGLGS                                          P
Sbjct: 206 QGFLAQGLQRTSAGLGSVIIDSQPLTVAVLASFLFGESIGIVRAGGLLLGVAGLLLLEVP 265

Query: 211 AF--DESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVI 268
           +   D +N SLWGSGEWWMLLAAQSMA+GTVMVRWVSKYSDP+MATGWHMVIGGLPL+ I
Sbjct: 266 SVTSDGNNFSLWGSGEWWMLLAAQSMAIGTVMVRWVSKYSDPIMATGWHMVIGGLPLLAI 325

Query: 269 SVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPM 328
           SV+NHDPV+  S++EL+++D++ALLYTSIFGSA+SYGVYFYSATKGSLTKLSSLTFLTPM
Sbjct: 326 SVINHDPVFNGSLQELSTNDVIALLYTSIFGSAVSYGVYFYSATKGSLTKLSSLTFLTPM 385

Query: 329 FASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF 362
           FASIFG+LYL ETFS LQLVGAAVT+VAIYLVNF
Sbjct: 386 FASIFGYLYLNETFSSLQLVGAAVTLVAIYLVNF 419

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255579425|ref|XP_002530556.1| Protein pecM, putative [Ricinus communis] gi|223529894|gb|EEF31824.1| Protein pecM, putative [Ricinus communis]

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 243/417 (58%), Positives = 286/417 (68%), Gaps = 69/417 (16%)

Query: 18  LLRSSLSSYSNKKLSSNHVAHAP-------PSLFSPYITINSFKKRCI---IVTNCTTTN 67
           LL  SL +  + K S  H++  P       PS  S +   +S +        + NCTT++
Sbjct: 3   LLSPSLPNNLSVKFSLLHISPPPYNRLFKYPSPISSHTITDSTRTTRRRPNFIANCTTSS 62

Query: 68  KK-NMESSST----VDCVETGTDVECLISP----------TDKEEIEQEQVEQDGQVMEL 112
           +   +ES+S+    +DCV TG DVECLIS           T+   +EQ + E++ +  +L
Sbjct: 63  RNVGLESTSSDSTDLDCVGTGLDVECLISSESSSNGTMSSTETTAVEQGREERESKRDDL 122

Query: 113 -GMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLP 171
             M++E  VLVSPFFFWGTAMVAMKEVLP  G FFVAAFRLIPAGL+LI FA+ + R  P
Sbjct: 123 LEMVVENGVLVSPFFFWGTAMVAMKEVLPLTGPFFVAAFRLIPAGLILIAFAAYKDRPFP 182

Query: 172 SGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGS----------------------- 208
           SGFNAW+SIFLF LVDA+ FQGFLA+GLQRTSAGLGS                       
Sbjct: 183 SGFNAWLSIFLFGLVDATFFQGFLAEGLQRTSAGLGSVIIDSQPLTVAVLAALLFGESIG 242

Query: 209 --------------------APAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYS 248
                               A + D+SN SLWGSGEWWMLLAAQSMAVGTVMVRWV+KYS
Sbjct: 243 LVGAGGLVLGVVGLLLLEVPALSIDQSNFSLWGSGEWWMLLAAQSMAVGTVMVRWVTKYS 302

Query: 249 DPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYF 308
           DPVMATGWHMVIGGLPL VIS+LNHDP++  S++ELT SDI ALLYTSIFGSAISYGV+F
Sbjct: 303 DPVMATGWHMVIGGLPLTVISILNHDPLFNGSLQELTVSDIAALLYTSIFGSAISYGVFF 362

Query: 309 YSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS 365
           YSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQL GAAVT+VAIY++   G+
Sbjct: 363 YSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLFGAAVTLVAIYMLGPPGA 419

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356569422|ref|XP_003552900.1| PREDICTED: uncharacterized transporter sll0355-like [Glycine max]

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 241/414 (58%), Positives = 280/414 (67%), Gaps = 60/414 (14%)

Query: 2   AWWSSASASSTFNSSFLLR--SSLSSYSNKKLSSNHVAHAPPSLFSPYITINSFKKRCII 59
           +WW S+ +++   S+   R  S LS  S  ++ +      PPS F+ + T     +  + 
Sbjct: 3   SWWCSSPSATLTVSTTTTRHFSLLSHTSQFRIQTLTF---PPSSFTRFTTAPPSLRFRVP 59

Query: 60  VTNCTTTNKKNMESSSTVDCVETGTDVECLISPTDKEEIEQEQVEQDGQVMELGMLL--- 116
            +N T    +  E    VDCV TG DVECL+   + EE + E             +L   
Sbjct: 60  CSNKTAFETELPEDG--VDCVGTGQDVECLV---NTEEKQSEPSSSSSSSSSSSSMLCLA 114

Query: 117 ----EWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPS 172
               E AVLVSPFFFWGTAMVAMKEVLPK G FFV+AFRLIPAG LL+ FA+S+GR LPS
Sbjct: 115 EALWEGAVLVSPFFFWGTAMVAMKEVLPKCGPFFVSAFRLIPAGFLLVAFAASRGRTLPS 174

Query: 173 GFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGS------------------------ 208
           GFNAW+SI LFALVDA+CFQGFLA+GLQRTSAGLGS                        
Sbjct: 175 GFNAWLSITLFALVDAACFQGFLAEGLQRTSAGLGSVIIDSQPLTVAVLAALLFGESIGV 234

Query: 209 -------------------APAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSD 249
                              A +FDESN SLWGSGEWWMLLAAQSMA+GTVMVRWVSKYSD
Sbjct: 235 VGAAGLVLGVIGLVLLELPALSFDESNFSLWGSGEWWMLLAAQSMAIGTVMVRWVSKYSD 294

Query: 250 PVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFY 309
           PVMATGWHMVIGGLPL++ +VLN+DP    S+KE +S+DILALLYTSIFGSA+SYGV+FY
Sbjct: 295 PVMATGWHMVIGGLPLVLFAVLNNDPAVSLSLKEYSSTDILALLYTSIFGSAVSYGVFFY 354

Query: 310 SATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFR 363
           SATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSP+QLVGA VTV  IY+VNFR
Sbjct: 355 SATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPVQLVGALVTVAGIYMVNFR 408

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356537734|ref|XP_003537380.1| PREDICTED: uncharacterized transporter sll0355-like [Glycine max]

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 223/344 (64%), Positives = 250/344 (72%), Gaps = 46/344 (13%)

Query: 66  TNKKNMESS---STVDCVETGTDVECLISPTDKEEIEQEQVEQDGQVMELGMLLEWAVLV 122
           +NK   E+      VDCV TG DVECL++  +K+            +     L E AVLV
Sbjct: 65  SNKTAFETELPEDGVDCVGTGQDVECLVNTEEKQSEPTSSSSSSSMLCLAEALWEGAVLV 124

Query: 123 SPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFL 182
           SPFFFWGTAMVAMKEVLPK G FFV+AFRLIPAG LL+ FA+S+GR LPSGF AW+SI L
Sbjct: 125 SPFFFWGTAMVAMKEVLPKCGPFFVSAFRLIPAGFLLVAFAASRGRSLPSGFIAWLSITL 184

Query: 183 FALVDASCFQGFLAQGLQRTSAGLGS---------------------------------- 208
           FALVDA+CFQGFLA+GLQRTSAGLGS                                  
Sbjct: 185 FALVDATCFQGFLAEGLQRTSAGLGSIIIDSQPLTVAVLAALLFGESIGVVGAAGLVLGV 244

Query: 209 ---------APAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMV 259
                    A +FDESN SLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMV
Sbjct: 245 IGLVLLELPALSFDESNFSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMV 304

Query: 260 IGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKL 319
           IGGLPL++ +VLN+DP    S+KE +S+DILALLYTS+FGSA+SYGV+FYSATKGSLTKL
Sbjct: 305 IGGLPLVLFAVLNNDPALSLSLKEYSSTDILALLYTSVFGSAVSYGVFFYSATKGSLTKL 364

Query: 320 SSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFR 363
           SSLTFLTPMFASIFGFLYLGETFSP+QLVGA VTV  IY+VN R
Sbjct: 365 SSLTFLTPMFASIFGFLYLGETFSPVQLVGALVTVAGIYMVNLR 408

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18396278|ref|NP_566180.1| nodulin MtN21 /EamA-like transporter protein [Arabidopsis thaliana] gi|16226571|gb|AAL16203.1|AF428434_1 AT3g02690/F16B3_32 [Arabidopsis thaliana] gi|15010664|gb|AAK73991.1| AT3g02690/F16B3_32 [Arabidopsis thaliana] gi|21593005|gb|AAM64954.1| unknown [Arabidopsis thaliana] gi|22137110|gb|AAM91400.1| At3g02690/F16B3_32 [Arabidopsis thaliana] gi|332640327|gb|AEE73848.1| nodulin MtN21 /EamA-like transporter protein [Arabidopsis thaliana]

 Score =  417 bits (1072), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 217/329 (65%), Positives = 245/329 (74%), Gaps = 48/329 (14%)

Query: 77  VDCVETGTDVECLISPTDKEEIEQEQVEQDGQVMELGMLLEWAVLVSPFFFWGTAMVAMK 136
           VDCV  G+DVEC ++  + EE     +   G+    G  LEW VL+SPFFFWGTAMVAMK
Sbjct: 89  VDCVGMGSDVEC-VNNGEDEENRSSGILSGGE----GTFLEWTVLISPFFFWGTAMVAMK 143

Query: 137 EVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLA 196
           EVLP  G FFVAAFRLIPAGLLL+ FA  +GR LP G NAW SI LFALVDA+CFQGFLA
Sbjct: 144 EVLPITGPFFVAAFRLIPAGLLLVAFAVYKGRPLPEGINAWFSIALFALVDATCFQGFLA 203

Query: 197 QGLQRTSAGLGSA-----------------------------------------PAF--D 213
           QGLQRTSAGLGS                                          P+   D
Sbjct: 204 QGLQRTSAGLGSVIIDSQPLTVAVLASFLFGESIGIVRAGGLLLGVAGLLLLEVPSVTSD 263

Query: 214 ESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNH 273
            +N SLWGSGEWWMLLAAQSMA+GTVMVRWVSKYSDP+MATGWHMVIGGLPL+ ISV+NH
Sbjct: 264 GNNFSLWGSGEWWMLLAAQSMAIGTVMVRWVSKYSDPIMATGWHMVIGGLPLLAISVINH 323

Query: 274 DPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIF 333
           DPV+  S+++L+++D++ALLYTSIFGSA+SYGVYFYSATKGSLTKLSSLTFLTPMFASIF
Sbjct: 324 DPVFNGSLQDLSTNDVIALLYTSIFGSAVSYGVYFYSATKGSLTKLSSLTFLTPMFASIF 383

Query: 334 GFLYLGETFSPLQLVGAAVTVVAIYLVNF 362
           G+LYL ETFS LQLVGAAVT+VAIYLVNF
Sbjct: 384 GYLYLNETFSSLQLVGAAVTLVAIYLVNF 412

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|6957732|gb|AAF32476.1| unknown protein [Arabidopsis thaliana]

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 217/344 (63%), Positives = 245/344 (71%), Gaps = 63/344 (18%)

Query: 77  VDCVETGTDVECLISPTDKEEIEQEQVEQDGQVMELGMLLEWAVLVSPFFFWGTAMVAMK 136
           VDCV  G+DVEC ++  + EE     +   G+    G  LEW VL+SPFFFWGTAMVAMK
Sbjct: 89  VDCVGMGSDVEC-VNNGEDEENRSSGILSGGE----GTFLEWTVLISPFFFWGTAMVAMK 143

Query: 137 EVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQ---- 192
           EVLP  G FFVAAFRLIPAGLLL+ FA  +GR LP G NAW SI LFALVDA+CFQ    
Sbjct: 144 EVLPITGPFFVAAFRLIPAGLLLVAFAVYKGRPLPEGINAWFSIALFALVDATCFQILVC 203

Query: 193 -----------GFLAQGLQRTSAGLGSA-------------------------------- 209
                      GFLAQGLQRTSAGLGS                                 
Sbjct: 204 MLVMLVRIMVQGFLAQGLQRTSAGLGSVIIDSQPLTVAVLASFLFGESIGIVRAGGLLLG 263

Query: 210 ---------PAF--DESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHM 258
                    P+   D +N SLWGSGEWWMLLAAQSMA+GTVMVRWVSKYSDP+MATGWHM
Sbjct: 264 VAGLLLLEVPSVTSDGNNFSLWGSGEWWMLLAAQSMAIGTVMVRWVSKYSDPIMATGWHM 323

Query: 259 VIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTK 318
           VIGGLPL+ ISV+NHDPV+  S+++L+++D++ALLYTSIFGSA+SYGVYFYSATKGSLTK
Sbjct: 324 VIGGLPLLAISVINHDPVFNGSLQDLSTNDVIALLYTSIFGSAVSYGVYFYSATKGSLTK 383

Query: 319 LSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF 362
           LSSLTFLTPMFASIFG+LYL ETFS LQLVGAAVT+VAIYLVNF
Sbjct: 384 LSSLTFLTPMFASIFGYLYLNETFSSLQLVGAAVTLVAIYLVNF 427

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147815348|emb|CAN76724.1| hypothetical protein VITISV_042981 [Vitis vinifera]

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 204/274 (74%), Positives = 227/274 (82%), Gaps = 25/274 (9%)

Query: 117 EWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNA 176
           EW VLVSPFFFWGTAMVAMK+VLPKAG FFV++FRLIPAGLL+I +A+S+GRK PSGF+A
Sbjct: 89  EWGVLVSPFFFWGTAMVAMKQVLPKAGPFFVSSFRLIPAGLLIIAYAASRGRKQPSGFSA 148

Query: 177 WVSIFLFALVDASCFQGFLAQGLQRTSAGL-----------------------GSAPAF- 212
           W+SIFLFALVDA+CFQGFLA+GLQRTSA L                          PAF 
Sbjct: 149 WLSIFLFALVDAACFQGFLAEGLQRTSAALLFGESIGFIGAAGLVLGVXGLLLLEVPAFS 208

Query: 213 -DESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVL 271
            D SN SLWGSGEWWMLLAAQSMAVGTVM+RWV+KYSDPVMATGWHMVIGGLPL++IS+L
Sbjct: 209 VDGSNFSLWGSGEWWMLLAAQSMAVGTVMIRWVTKYSDPVMATGWHMVIGGLPLVLISIL 268

Query: 272 NHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFAS 331
           NHDP    S  ELTSSD+LALLYTSIFGSAISY V+FY AT+GSLTKLSSLTFLTPMFAS
Sbjct: 269 NHDPALSGSFNELTSSDLLALLYTSIFGSAISYSVFFYYATRGSLTKLSSLTFLTPMFAS 328

Query: 332 IFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS 365
           IFGFLYLGET SPLQLVGA VT++ IY+VN+R S
Sbjct: 329 IFGFLYLGETLSPLQLVGALVTILGIYMVNYRDS 362

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449445186|ref|XP_004140354.1| PREDICTED: uncharacterized transporter sll0355-like [Cucumis sativus]

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 221/364 (60%), Positives = 257/364 (70%), Gaps = 54/364 (14%)

Query: 53  FKKRCIIVTNCTTTN-KKNMESSSTVDCVETGTDVECLISPTDKEEIEQEQV-------- 103
           F    I V NCT +     ++ + ++DCV T  DVEC++SP D++      V        
Sbjct: 56  FHYVAIPVANCTRSGGDTELDFTESIDCVGTAQDVECVVSPNDEDPSSSIGVPLKLGISS 115

Query: 104 --EQDGQVMELGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLIT 161
               DG V  L    E+AVLVSPFFFWGTAMVAMKEVLP++G FFV+AFRLIPAG LLI 
Sbjct: 116 DYSGDGSVAVLEKAWEFAVLVSPFFFWGTAMVAMKEVLPRSGPFFVSAFRLIPAGFLLIA 175

Query: 162 FASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSA------------ 209
           FA+ +GR  PSGF+AW+SI LFALVDA+ FQGFLAQGLQRTSAGLGS             
Sbjct: 176 FAAFRGRPFPSGFSAWISIILFALVDATFFQGFLAQGLQRTSAGLGSVIIDSQPLTVAVL 235

Query: 210 -----------------------------PA--FDESNSSLWGSGEWWMLLAAQSMAVGT 238
                                        P+  FD ++ SLWGSGEWWM LAAQSMAVGT
Sbjct: 236 AAFLFGESLGLVGAAGLVLGVLGLLLLEVPSLTFDANSFSLWGSGEWWMFLAAQSMAVGT 295

Query: 239 VMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIF 298
           VMVRWVSKYSDP+MATGWHMVIGGLPL++I +LNHDP    S+K+ T++DILALLY SIF
Sbjct: 296 VMVRWVSKYSDPIMATGWHMVIGGLPLLMICILNHDPAVSGSLKDFTTNDILALLYASIF 355

Query: 299 GSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIY 358
           GSA+SYG +FYSATKGSLTKLSSLTFLTPMFAS+FGFLYLGETFSP+QLVGA VTVVAIY
Sbjct: 356 GSAVSYGSFFYSATKGSLTKLSSLTFLTPMFASVFGFLYLGETFSPIQLVGAVVTVVAIY 415

Query: 359 LVNF 362
           +VN+
Sbjct: 416 VVNY 419

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225466171|ref|XP_002263956.1| PREDICTED: uncharacterized transporter sll0355 [Vitis vinifera]

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 207/296 (69%), Positives = 232/296 (78%), Gaps = 43/296 (14%)

Query: 114 MLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSG 173
           +L EW VLVSPFFFWGTAMVAMK+VLPKAG FFV++FRLIPAGLL+I +A+S+GRK PSG
Sbjct: 86  VLWEWGVLVSPFFFWGTAMVAMKQVLPKAGPFFVSSFRLIPAGLLIIAYAASRGRKQPSG 145

Query: 174 FNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSA------------------------ 209
           F+AW+SIFLFALVDA+CFQGFLA+GLQRTSAGLGS                         
Sbjct: 146 FSAWLSIFLFALVDAACFQGFLAEGLQRTSAGLGSVIIDSQPLTVAVLAALLFGESIGFI 205

Query: 210 -----------------PAF--DESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDP 250
                            PA   D SN SLWGSGEWWMLLAAQSMAVGTVM+RWV+KYSDP
Sbjct: 206 GAAGLVLGVIGLLLLEVPALSVDGSNFSLWGSGEWWMLLAAQSMAVGTVMIRWVTKYSDP 265

Query: 251 VMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYS 310
           VMATGWHMVIGGLPL++IS+LNHDP    S  ELTSSD+LALLYTSIFGSAISY V+FY 
Sbjct: 266 VMATGWHMVIGGLPLVLISILNHDPALSGSFNELTSSDLLALLYTSIFGSAISYSVFFYY 325

Query: 311 ATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGSV 366
           AT+GSLTKLSSLTFLTPMFASIFGFLYLGET SPLQLVGA VT++ IY+VN+R S+
Sbjct: 326 ATRGSLTKLSSLTFLTPMFASIFGFLYLGETLSPLQLVGALVTILGIYMVNYRDSM 381

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242039249|ref|XP_002467019.1| hypothetical protein SORBIDRAFT_01g018390 [Sorghum bicolor] gi|241920873|gb|EER94017.1| hypothetical protein SORBIDRAFT_01g018390 [Sorghum bicolor]

 Score =  386 bits (992), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 195/349 (55%), Positives = 245/349 (70%), Gaps = 60/349 (17%)

Query: 75  STVDCVETGTDVECLISPTDKE-----------------EIEQEQVEQDGQVMELGMLLE 117
            ++DCV TG+DVECLI    K+                 + + ++ E D   +   +L E
Sbjct: 61  DSLDCVGTGSDVECLIDAGAKDAASPLLPARSPAAPGASKDDGKKSEGDAAAVSASLLWE 120

Query: 118 WAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAW 177
           WA LVSPFFFWGTAMVAMK V+P+ G FFVAA RL+PAG LL+ FA+++GRK P+G+ AW
Sbjct: 121 WASLVSPFFFWGTAMVAMKGVIPRTGPFFVAALRLLPAGALLVAFAAARGRKQPAGWEAW 180

Query: 178 VSIFLFALVDASCFQGFLAQGLQRTSAGLGS----------------------------- 208
           ++I  F L+DA+CFQGFLA+GLQ+TSAGLGS                             
Sbjct: 181 LAIAAFGLIDAACFQGFLAEGLQKTSAGLGSVIIDSQPLTVAILASLLFGESIGAVGVGG 240

Query: 209 ------------APAF--DESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMAT 254
                        PA   + +++++WGSGEW M L+AQSMAVGT+MVRWVSKYSDP+MAT
Sbjct: 241 LVLGVVGLLLLEVPALSIEGNDTTIWGSGEWLMFLSAQSMAVGTIMVRWVSKYSDPIMAT 300

Query: 255 GWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKG 314
           GWHM+IGGLPL+VISVLNHDP     +++LT SDILAL YTSIFGSA+SYGVYFY+AT+G
Sbjct: 301 GWHMIIGGLPLLVISVLNHDPALSGHIQDLTLSDILALGYTSIFGSAVSYGVYFYNATRG 360

Query: 315 SLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFR 363
           SLT LSSLTFLTPMFAS+FG+LYLGETFSP+QL GA +T+VAIY+VN++
Sbjct: 361 SLTTLSSLTFLTPMFASVFGYLYLGETFSPVQLGGALLTLVAIYMVNYK 409

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	366
TAIR|locus:2076954	417	AT3G02690 [Arabidopsis thalian	0.409	0.359	0.726	7.3e-105
TIGR_CMR|SPO_3584	306	SPO_3584 "membrane protein, dr	0.333	0.398	0.297	1e-11
UNIPROTKB|P0AA70	306	yedA "putative membrane transp	0.540	0.647	0.290	4.9e-11
UNIPROTKB|Q3Z7M8	287	DET1056 "Membrane protein, put	0.562	0.717	0.282	3.5e-08
TIGR_CMR|DET_1056	287	DET_1056 "membrane protein, pu	0.562	0.717	0.282	3.5e-08
TIGR_CMR|BA_0829	303	BA_0829 "transporter, EamA fam	0.554	0.669	0.252	2.1e-07
UNIPROTKB|Q3AAZ7	303	CHY_1867 "Putative membrane pr	0.368	0.445	0.257	6e-07
TIGR_CMR|CHY_1867	303	CHY_1867 "putative membrane pr	0.368	0.445	0.257	6e-07
TIGR_CMR|BA_3061	303	BA_3061 "transporter, EamA fam	0.319	0.386	0.252	1.7e-06
TIGR_CMR|BA_2736	305	BA_2736 "transporter, EamA fam	0.409	0.491	0.221	1.1e-05

TAIR|locus:2076954 AT3G02690 [Arabidopsis thaliana (taxid:3702)]

 Score = 593 (213.8 bits), Expect = 7.3e-105, Sum P(2) = 7.3e-105
 Identities = 109/150 (72%), Positives = 126/150 (84%)

Query:   213 DESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLN 272
             D +N SLWGSGEWWMLLAAQSMA+GTVMVRWVSKYSDP+MATGWHMVIGGLPL+ ISV+N
Sbjct:   263 DGNNFSLWGSGEWWMLLAAQSMAIGTVMVRWVSKYSDPIMATGWHMVIGGLPLLAISVIN 322

Query:   273 HDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXXXXXPMFASI 332
             HDPV+  S+++L+++D++ALLYTSIFGSA+SYGVYFY                 PMFASI
Sbjct:   323 HDPVFNGSLQDLSTNDVIALLYTSIFGSAVSYGVYFYSATKGSLTKLSSLTFLTPMFASI 382

Query:   333 FGFLYLGETFSPLQLVGAAVTVVAIYLVNF 362
             FG+LYL ETFS LQLVGAAVT+VAIYLVNF
Sbjct:   383 FGYLYLNETFSSLQLVGAAVTLVAIYLVNF 412

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016020 "membrane" evidence=IEA;ISS

TIGR_CMR|SPO_3584 SPO_3584 "membrane protein, drug/metabolite transporter (DMT) family" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 137 (53.3 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
 Identities = 39/131 (29%), Positives = 66/131 (50%)

Query:   231 AQSMAVGTVMVR-WVSKYSDPVMA-TGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSD 288
             A SMAVG V+ R W  +   P++  T W +  GGL L+ ++ L      G     L+ ++
Sbjct:   156 ALSMAVGVVLTRKW--RPDVPLVTFTAWQLTAGGLLLIPVAWLAAPDWPG-----LSLTN 208

Query:   289 ILALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFSPLQLV 348
             + AL +  + G A++Y ++F                  P+ A I G+L LGE  SP+Q +
Sbjct:   209 LAALAWLGLIGGALTYILWFRGLARIEPAAVSLLGILSPLTAVILGWLALGEALSPVQGL 268

Query:   349 GAAVTVVAIYL 359
             GA + + A+++
Sbjct:   269 GAVIVLGAVWI 279

GO:0005215 "transporter activity" evidence=ISS

GO:0006810 "transport" evidence=ISS

GO:0016020 "membrane" evidence=ISS

UNIPROTKB|P0AA70 yedA "putative membrane transport protein" [Escherichia coli K-12 (taxid:83333)]

 Score = 145 (56.1 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
 Identities = 63/217 (29%), Positives = 98/217 (45%)

Query:   152 LIPAGLLLITFASSQGRKLPSGFNAWV--SIFLFALVDASCFQGFLAQGLQRTSAGLGSA 209
             L+  G  ++T A  Q   +PSG  A V  ++ LF L  +  F G   + L+     +G A
Sbjct:    78 LLAVGNGMVTVAEHQN--VPSGIAAVVVATVPLFTLCFSRLF-GIKTRKLEWVGIAIGLA 134

Query:   210 PAFD-ESNSSLWGS--GEWWMLLAAQSMAVGTVMVRWVSKYSDPV--MATGWHMVIGGLP 264
                   S  +L G+  G   +L+ + S A G+V   + S+ + PV  MA    M+  G+ 
Sbjct:   135 GIIMLNSGGNLSGNPWGAILILIGSISWAFGSV---YGSRITLPVGMMAGAIEMLAAGVV 191

Query:   265 LMVISVLNHDPVYGESVKELTS-SDILALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXX 323
             LM+ S+     + GE +  L S S  LA+ Y ++FGS I+   Y Y              
Sbjct:   192 LMIASM-----IAGEKLTALPSLSGFLAVGYLALFGSIIAINAYMYLIRNVSPALATSYA 246

Query:   324 XXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLV 360
                P+ A + G    GET S ++ +   V V A+ LV
Sbjct:   247 YVNPVVAVLLGTGLGGETLSKIEWLALGVIVFAVVLV 283

GO:0055085 "transmembrane transport" evidence=IMP;RCA

GO:0022857 "transmembrane transporter activity" evidence=IMP;RCA

GO:0005886 "plasma membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA;RCA

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|Q3Z7M8 DET1056 "Membrane protein, putative" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 149 (57.5 bits), Expect = 3.5e-08, P = 3.5e-08
 Identities = 65/230 (28%), Positives = 100/230 (43%)

Query:   148 AAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQR---TSA 204
             A F L   G+ L  FA + G K  +   A  S+ +     A  F   LA+   +   T A
Sbjct:    66 AIFLLGLIGISLYHFALNYGEKTVTAGAA--SLII---ASAPIFSVLLARFFYKDKLTPA 120

Query:   205 G-LGSAPAFDESNSSLWGSGE--------WWMLLAAQSMAVGTVMVR-WVSKYSDPVMAT 254
             G LG   +F        G G+        +W+LLAA   ++  V  R  + KYS    +T
Sbjct:   121 GWLGILLSFGGIAVITLGEGQTLSFEPHAFWVLLAALFTSIYIVFQRPLLKKYSGFEFST 180

Query:   255 GWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYXXXXX 314
               + +  G  L+++      P   + + E  +S  LA++Y  IF +AISY +Y Y     
Sbjct:   181 --YAIWAGTLLLMVGA----PGLLKEISEAPASSTLAVVYLGIFPTAISYLLYSYALSKA 234

Query:   315 XXXXXXXXXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 364
                         P+FA    FL+LGE  +P+ L+G  + +  + LVN  G
Sbjct:   235 RISQVISFLYLNPVFAIGIAFLWLGEIPAPISLLGGLLALAGVILVNRYG 284

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|DET_1056 DET_1056 "membrane protein, putative" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 149 (57.5 bits), Expect = 3.5e-08, P = 3.5e-08
 Identities = 65/230 (28%), Positives = 100/230 (43%)

Query:   148 AAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQR---TSA 204
             A F L   G+ L  FA + G K  +   A  S+ +     A  F   LA+   +   T A
Sbjct:    66 AIFLLGLIGISLYHFALNYGEKTVTAGAA--SLII---ASAPIFSVLLARFFYKDKLTPA 120

Query:   205 G-LGSAPAFDESNSSLWGSGE--------WWMLLAAQSMAVGTVMVR-WVSKYSDPVMAT 254
             G LG   +F        G G+        +W+LLAA   ++  V  R  + KYS    +T
Sbjct:   121 GWLGILLSFGGIAVITLGEGQTLSFEPHAFWVLLAALFTSIYIVFQRPLLKKYSGFEFST 180

Query:   255 GWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYXXXXX 314
               + +  G  L+++      P   + + E  +S  LA++Y  IF +AISY +Y Y     
Sbjct:   181 --YAIWAGTLLLMVGA----PGLLKEISEAPASSTLAVVYLGIFPTAISYLLYSYALSKA 234

Query:   315 XXXXXXXXXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 364
                         P+FA    FL+LGE  +P+ L+G  + +  + LVN  G
Sbjct:   235 RISQVISFLYLNPVFAIGIAFLWLGEIPAPISLLGGLLALAGVILVNRYG 284

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

TIGR_CMR|BA_0829 BA_0829 "transporter, EamA family" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 143 (55.4 bits), Expect = 2.1e-07, P = 2.1e-07
 Identities = 55/218 (25%), Positives = 97/218 (44%)

Query:   147 VAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGL 206
             VA F +     L  T A++ G  L S  NA +SI LF+++        L Q L    +  
Sbjct:    76 VALFNIFQFLALEKTSATNVG--LISTLNA-ISIALFSVLFLKEKVNTL-QILSMILSFF 131

Query:   207 GSAPAFDESNSSL-----WGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIG 261
             G      + N +L     + SG+ WM+ A     + +V  +W +K + P+MAT +  + G
Sbjct:   132 GVILVLLKGNFALLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIFG 191

Query:   262 GLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYXXXXXXXXXXXX 321
              + L+  ++ +       +V  + +S I +LLYT +  + +    +              
Sbjct:   192 VILLLPFNIGSF------TVTNINTSFITSLLYTGLISTVLCMVFWNIGVQKLGATTSGI 245

Query:   322 XXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYL 359
                  P+F +I  FL+LGE  + +Q+VG  + +   YL
Sbjct:   246 FLNFNPIFTAILAFLFLGEELTWIQIVGTMIVMTGCYL 283

GO:0005215 "transporter activity" evidence=ISS

GO:0006810 "transport" evidence=ISS

UNIPROTKB|Q3AAZ7 CHY_1867 "Putative membrane protein" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 139 (54.0 bits), Expect = 6.0e-07, P = 6.0e-07
 Identities = 36/140 (25%), Positives = 66/140 (47%)

Query:   227 MLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTS 286
             ++LAA +  + TV+ +  S+ +D V+   +  ++G + L+ I +L H P++      L  
Sbjct:   155 LILAAVTYGLYTVLGKRFSQKTDSVIMNSFSFILGSVFLLPIILLKHYPLFS-----LQP 209

Query:   287 SDILALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFSPLQ 346
               IL + Y + F + ++Y  YF                  P+ AS F +  LGE  +   
Sbjct:   210 KAILPMAYLTFFVTGLAYYTYFLGLTNISAGNGSMVFFIKPVLASFFAWAILGEKITFEF 269

Query:   347 LVGAAVTVVAIYLVNFRGSV 366
             + G  V ++ IY+V + G V
Sbjct:   270 IAGTMVILLGIYIVQWAGQV 289

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|CHY_1867 CHY_1867 "putative membrane protein" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 139 (54.0 bits), Expect = 6.0e-07, P = 6.0e-07
 Identities = 36/140 (25%), Positives = 66/140 (47%)

Query:   227 MLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTS 286
             ++LAA +  + TV+ +  S+ +D V+   +  ++G + L+ I +L H P++      L  
Sbjct:   155 LILAAVTYGLYTVLGKRFSQKTDSVIMNSFSFILGSVFLLPIILLKHYPLFS-----LQP 209

Query:   287 SDILALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFSPLQ 346
               IL + Y + F + ++Y  YF                  P+ AS F +  LGE  +   
Sbjct:   210 KAILPMAYLTFFVTGLAYYTYFLGLTNISAGNGSMVFFIKPVLASFFAWAILGEKITFEF 269

Query:   347 LVGAAVTVVAIYLVNFRGSV 366
             + G  V ++ IY+V + G V
Sbjct:   270 IAGTMVILLGIYIVQWAGQV 289

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

TIGR_CMR|BA_3061 BA_3061 "transporter, EamA family" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 113 (44.8 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
 Identities = 31/123 (25%), Positives = 58/123 (47%)

Query:   244 VSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAIS 303
             ++KYS  +  T W  +IG +PL++  + N + +    V  L+     +L Y+ IF +   
Sbjct:   176 ITKYS-AMRVTSWSTLIGIVPLVIYCLFNVNSLTWP-VDTLSWG---SLAYSIIFATIFG 230

Query:   304 YGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFR 363
               +++                  P+FA IF  + +GE  + +QLVG  +  V +Y+V  +
Sbjct:   231 LAMWYVGISQIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFVGLYVVK-K 289

Query:   364 GSV 366
             G +
Sbjct:   290 GGI 292

GO:0005215 "transporter activity" evidence=ISS

GO:0006810 "transport" evidence=ISS

TIGR_CMR|BA_2736 BA_2736 "transporter, EamA family" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 128 (50.1 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 35/158 (22%), Positives = 68/158 (43%)

Query:   208 SAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPV---MATGWHMVIGGLP 264
             S P   +  S +W    + +++      +G++  + +      V   +  G  M  GG+ 
Sbjct:   134 SLPGMHQEISFIWSIACFVLIIGELFYGIGSIRSKEILSDLQSVSLFLINGIQMFYGGVL 193

Query:   265 LMVISVLNHDPVYGESVKELTSSDIL-ALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXX 323
             L+++S +   P    +V  L S  +   +LY    GS   +G+Y++              
Sbjct:   194 LLIVSFIVEQP----NVTVLASWSVQWPILYLIFIGSIGGHGLYYWLLSKTNPVFPSTWL 249

Query:   324 XXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN 361
                P+ A I G++ LGE  +P+  +GA   +V ++L N
Sbjct:   250 YVSPLIAIIVGYIILGEPLNPIMGIGACFILVGVFLAN 287

GO:0005215 "transporter activity" evidence=ISS

GO:0006810 "transport" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q93V85	WTR16_ARATH	No assigned EC number	0.6595	0.7677	0.6738	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	366
pfam00892	126	pfam00892, EamA, EamA-like transporter family	4e-18
TIGR00950	260	TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Tran	7e-18
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	3e-16
PRK11272	292	PRK11272, PRK11272, putative DMT superfamily trans	9e-12
PRK11453	299	PRK11453, PRK11453, O-acetylserine/cysteine export	4e-05
pfam00892	126	pfam00892, EamA, EamA-like transporter family	5e-05
COG2510	140	COG2510, COG2510, Predicted membrane protein [Func	3e-04
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	0.003

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 79.2 bits (196), Expect = 4e-18
 Identities = 38/130 (29%), Positives = 67/130 (51%), Gaps = 5/130 (3%)

Query: 233 SMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILAL 292
           S A+  V  + + +   P+  T +  +I G+ L+++  L       +    L+   ILAL
Sbjct: 2   SWALYFVFSKKLLERISPLTFTAYRFLIAGILLILLLFL-----LRKPFALLSLKAILAL 56

Query: 293 LYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAV 352
           LY  +FG+A+ Y +YFY+    S +  S +T L+P+F  I   L LGE  +  QL+G  +
Sbjct: 57  LYLGLFGTALGYLLYFYALKYVSASNASVITSLSPVFTLILSVLLLGEKLTLKQLLGIVL 116

Query: 353 TVVAIYLVNF 362
            ++ + L+  
Sbjct: 117 ILLGVLLILL 126

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

>gnl|CDD|233205 TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Transporter

 Score = 82.0 bits (203), Expect = 7e-18
 Identities = 61/268 (22%), Positives = 98/268 (36%), Gaps = 49/268 (18%)

Query: 128 WGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVD 187
           WGT  V + + L      + A FR +   LLL+        +        + + L   + 
Sbjct: 1   WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPL----LRRRPPLKRLLRLLLLGALQ 56

Query: 188 ASCFQGFLAQGLQRTSAG-----LGSAPAF------------------------------ 212
              F       ++R   G     L  AP +                              
Sbjct: 57  IGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVL 116

Query: 213 --DESNSSLWGSGEWWMLLAAQSMAVGTVMV-RWVSKYSDP-VMATGWHMVIGGLPLMVI 268
              + N S+  +G    L +  S A+GTV+  R V K     +  TGW +++G L L+  
Sbjct: 117 LLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPF 176

Query: 269 SVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPM 328
           +             +  S    ALLY  + G+A++Y ++    T    +  S L    P+
Sbjct: 177 AWFL------GPNPQALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPL 230

Query: 329 FASIFGFLYLGETFSPLQLVGAAVTVVA 356
            A + G L LGET S  QL+G A+ + A
Sbjct: 231 VALLLGLLILGETLSLPQLIGGALIIAA 258

[Transport and binding proteins, Amino acids, peptides and amines]. Length = 260

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 78.0 bits (192), Expect = 3e-16
 Identities = 70/295 (23%), Positives = 119/295 (40%), Gaps = 48/295 (16%)

Query: 110 MELGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAF-RLIPAGLLLITFASSQGR 168
           M+  +LL    L+     WG + +A+K  +     F  AA  R + A LLL+     + R
Sbjct: 1   MKRALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPR 60

Query: 169 KLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAG-----LGSAPAF----------- 212
            L      W+ + L AL+  +     L   L+ TSA      +G  P F           
Sbjct: 61  GLRPALRPWLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLG 120

Query: 213 ------------------------DESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYS 248
                                         L   G    L AA   A+ T +V+ +S+  
Sbjct: 121 ERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWALYTALVKRLSRLG 180

Query: 249 DPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYF 308
              +A    +++  L L++  +             + S   L LLY  +F + ++Y +++
Sbjct: 181 PVTLALLLQLLLALLLLLLFFLSGFGAP-------ILSRAWLLLLYLGVFSTGLAYLLWY 233

Query: 309 YSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFR 363
           Y+      + ++ L+ L P+FA++ G L LGE  SP QL+GAA+ V+ + L + R
Sbjct: 234 YALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288

Length = 292

>gnl|CDD|183067 PRK11272, PRK11272, putative DMT superfamily transporter inner membrane protein; Provisional

 Score = 64.6 bits (158), Expect = 9e-12
 Identities = 74/287 (25%), Positives = 122/287 (42%), Gaps = 51/287 (17%)

Query: 115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGF 174
           L  +  L + +  WG+  + ++  +       +A  R + AG+LL+ F   +G  LP+  
Sbjct: 7   LPLFGALFALYIIWGSTYLVIRIGVESWPPLMMAGVRFLIAGILLLAFLLLRGHPLPT-L 65

Query: 175 NAWVSIFLFALVDASCFQGF--LAQGLQRTSAGL-----GSAPAFDESNSSLWG----SG 223
             W++  L  L+  +   G   +A+  Q   +G+      + P F    S L+G      
Sbjct: 66  RQWLNAALIGLLLLAVGNGMVTVAEH-QNVPSGIAAVVVATVPLFTLCFSRLFGIRTRKL 124

Query: 224 EWW---------------------------MLLAAQSMAVGTVMVRWVSKYSDPV--MAT 254
           EW                            +L+A+ S A G+V   W S+   PV  MA 
Sbjct: 125 EWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASWAFGSV---WSSRLPLPVGMMAG 181

Query: 255 GWHMVIGGLPLMVISVLNHDPVYGESVKEL-TSSDILALLYTSIFGSAISYGVYFYSATK 313
              M+  G+ L++ S+L+     GE +  L T S  LAL Y ++FGS I+   Y Y    
Sbjct: 182 AAEMLAAGVVLLIASLLS-----GERLTALPTLSGFLALGYLAVFGSIIAISAYMYLLRN 236

Query: 314 GSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLV 360
                 +S  ++ P+ A + G    GET SP++ +   V V A+ LV
Sbjct: 237 VRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLV 283

Length = 292

>gnl|CDD|183142 PRK11453, PRK11453, O-acetylserine/cysteine export protein; Provisional

 Score = 44.4 bits (105), Expect = 4e-05
 Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 4/139 (2%)

Query: 228 LLAAQSMAVGTVMVRWVSKYSD--PVMA-TGWHMVIGGLPLMVISVLNHDP-VYGESVKE 283
           L AA S A G +  + +  +S    VM+   W  +I  +P  V S++         S+  
Sbjct: 149 LAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVT 208

Query: 284 LTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFS 343
           +  + IL+L+Y +   + + YG++     +    +++ L+ L P+       L L E  +
Sbjct: 209 IDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLT 268

Query: 344 PLQLVGAAVTVVAIYLVNF 362
            LQ +GA + +  +Y+  F
Sbjct: 269 GLQFLGAVLIMAGLYINVF 287

Length = 299

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 42.2 bits (100), Expect = 5e-05
 Identities = 17/84 (20%), Positives = 29/84 (34%), Gaps = 1/84 (1%)

Query: 126 FFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPS-GFNAWVSIFLFA 184
             W    V  K++L +       A+R + AG+LLI       +        A +++    
Sbjct: 1   LSWALYFVFSKKLLERISPLTFTAYRFLIAGILLILLLFLLRKPFALLSLKAILALLYLG 60

Query: 185 LVDASCFQGFLAQGLQRTSAGLGS 208
           L   +         L+  SA   S
Sbjct: 61  LFGTALGYLLYFYALKYVSASNAS 84

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

>gnl|CDD|225308 COG2510, COG2510, Predicted membrane protein [Function unknown]

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 31/140 (22%), Positives = 61/140 (43%), Gaps = 8/140 (5%)

Query: 226 WMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELT 285
           + LL+A    +  +  +   +  DP  AT    ++  L  ++I +L    V G   +   
Sbjct: 7   YALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVI-LIFLLIVLL----VTGNW-QAGG 60

Query: 286 SSDILALLYTSIFG--SAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFS 343
                + L+  + G    +S+ +YF +  KG  +++  L   + + A +   L+LGE  S
Sbjct: 61  EIGPKSWLFLILSGLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLS 120

Query: 344 PLQLVGAAVTVVAIYLVNFR 363
               +G  + V+   LV+ R
Sbjct: 121 LPTWIGIVLIVIGAILVSLR 140

Length = 140

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 38.7 bits (90), Expect = 0.003
 Identities = 27/140 (19%), Positives = 55/140 (39%), Gaps = 6/140 (4%)

Query: 226 WMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELT 285
            +LL      +  + ++   +  DP +       +    L++  +L              
Sbjct: 11  ALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLL-----EPRGLRPA 65

Query: 286 SSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFG-FLYLGETFSP 344
               L LL  ++ G A+ + + F +    S +  S +  L P+F ++    L LGE  S 
Sbjct: 66  LRPWLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSL 125

Query: 345 LQLVGAAVTVVAIYLVNFRG 364
           LQ++G  + +  + L+   G
Sbjct: 126 LQILGILLALAGVLLILLGG 145

Length = 292

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	366
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.96
PRK11272	292	putative DMT superfamily transporter inner membran	99.95
PLN00411	358	nodulin MtN21 family protein; Provisional	99.95
PRK11689	295	aromatic amino acid exporter; Provisional	99.94
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.94
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.92
PRK15430	296	putative chloramphenical resistance permease RarD;	99.91
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.89
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.86
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.85
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.83
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.82
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.82
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.8
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.7
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.67
COG2510	140	Predicted membrane protein [Function unknown]	99.65
COG2962	293	RarD Predicted permeases [General function predict	99.64
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.55
KOG2765	416	consensus Predicted membrane protein [Function unk	99.33
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.22
PRK15430	296	putative chloramphenical resistance permease RarD;	99.2
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.19
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.16
PLN00411	358	nodulin MtN21 family protein; Provisional	98.98
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.97
PRK11272	292	putative DMT superfamily transporter inner membran	98.96
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.9
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.85
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.85
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.82
PRK11689	295	aromatic amino acid exporter; Provisional	98.79
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.72
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	98.68
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.62
COG2962	293	RarD Predicted permeases [General function predict	98.61
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.57
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.47
KOG2766	336	consensus Predicted membrane protein [Function unk	98.47
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.42
COG2510	140	Predicted membrane protein [Function unknown]	98.33
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.31
KOG1581	327	consensus UDP-galactose transporter related protei	98.27
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.23
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	98.21
KOG1580	337	consensus UDP-galactose transporter related protei	98.15
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	98.09
KOG4510	346	consensus Permease of the drug/metabolite transpor	97.99
PRK13499	345	rhamnose-proton symporter; Provisional	97.97
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.95
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.88
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.87
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.73
COG2076	106	EmrE Membrane transporters of cations and cationic	97.7
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	97.65
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.65
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	97.65
PRK11431	105	multidrug efflux system protein; Provisional	97.64
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.56
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	97.55
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.53
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.44
KOG1443	349	consensus Predicted integral membrane protein [Fun	97.37
KOG3912	372	consensus Predicted integral membrane protein [Gen	97.3
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	97.22
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.19
PRK13499	345	rhamnose-proton symporter; Provisional	97.14
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	97.0
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	96.82
KOG1582	367	consensus UDP-galactose transporter related protei	96.46
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	96.2
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	96.15
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	95.76
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	95.67
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	95.34
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	94.93
KOG2922	335	consensus Uncharacterized conserved protein [Funct	94.29
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	94.12
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	93.62
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	93.4
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	93.33
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	92.5
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	92.3
PF13536	113	EmrE: Multidrug resistance efflux transporter	91.87
PRK02237	109	hypothetical protein; Provisional	91.63
KOG2765	416	consensus Predicted membrane protein [Function unk	90.67
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	90.18
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	89.11
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	88.55
KOG3912	372	consensus Predicted integral membrane protein [Gen	87.8
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	87.14
PF04342	108	DUF486: Protein of unknown function, DUF486; Inter	85.9
KOG1580	337	consensus UDP-galactose transporter related protei	84.13
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	82.61

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.96  E-value=3.3e-27  Score=222.64  Aligned_cols=243  Identities=17%  Similarity=0.190  Sum_probs=197.7

Q ss_pred             hhHHHHHHHHHHHHHHhhHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHH
Q 017782          113 GMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQ  192 (366)
Q Consensus       113 ~~~~g~l~llla~~~~g~~~~~~k~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~  192 (366)
                      ++.+++.++++++++|++++.++|++.++++|.++.++|++++.++++++...+++  +.+++++...+..|.+. +..+
T Consensus         9 ~~~~~~~~~~la~~~~~~~~~~~K~~~~~~~~~~~~~~R~~~a~l~l~~~~~~~~~--~~~~~~~~~~~~~g~~~-~~~~   85 (293)
T PRK10532          9 PVWLPILLLLIAMASIQSGASLAKSLFPLVGAPGVTALRLALGTLILIAIFKPWRL--RFAKEQRLPLLFYGVSL-GGMN   85 (293)
T ss_pred             ccchHHHHHHHHHHHHHhhHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhHHhc--cCCHHHHHHHHHHHHHH-HHHH
Confidence            34788999999999999999999999999999999999999999998887644332  23457777777888764 5556


Q ss_pred             HHHHHHhhccccccccc-----c--------------------------cc--cCCCCccchHHHHHHHHHHHHHHHHHH
Q 017782          193 GFLAQGLQRTSAGLGSA-----P--------------------------AF--DESNSSLWGSGEWWMLLAAQSMAVGTV  239 (366)
Q Consensus       193 ~~~~~al~~~~~~~a~~-----P--------------------------~~--~~~~~~~~~~G~l~allaa~~~a~~~v  239 (366)
                      .++++++++++++.+++     |                          ..  +.+.......|++++++++++|++|.+
T Consensus        86 ~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~~~~~~~~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v  165 (293)
T PRK10532         86 YLFYLSIQTVPLGIAVALEFTGPLAVALFSSRRPVDFVWVVLAVLGLWFLLPLGQDVSHVDLTGAALALGAGACWAIYIL  165 (293)
T ss_pred             HHHHHHHhcccHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHheeeecCCCcccCChHHHHHHHHHHHHHHHHHH
Confidence            68999999999999877     3                          11  111122234699999999999999999


Q ss_pred             HHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhH
Q 017782          240 MVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKL  319 (366)
Q Consensus       240 ~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~  319 (366)
                      ..|+..++.++... .+..+++++++.+.....+..      ...+...|..++++|++++.++|.+|++++++.+++++
T Consensus       166 ~~r~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~------~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~a  238 (293)
T PRK10532        166 SGQRAGAEHGPATV-AIGSLIAALIFVPIGALQAGE------ALWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTF  238 (293)
T ss_pred             HHHHHhccCCchHH-HHHHHHHHHHHHHHHHHccCc------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHH
Confidence            99999888888765 455666666666655543221      12355667777899999999999999999999999999


Q ss_pred             HHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccCC
Q 017782          320 SSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS  365 (366)
Q Consensus       320 s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~~  365 (366)
                      +++.++||+++++++++++||+++..|++|+++|++|+++..++++
T Consensus       239 s~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~  284 (293)
T PRK10532        239 GTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIR  284 (293)
T ss_pred             HHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCC
Confidence            9999999999999999999999999999999999999999866543

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.95  E-value=5.6e-26  Score=214.17  Aligned_cols=242  Identities=25%  Similarity=0.406  Sum_probs=199.8

Q ss_pred             HHHHHHHHHHHhhHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 017782          118 WAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQ  197 (366)
Q Consensus       118 ~l~llla~~~~g~~~~~~k~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~  197 (366)
                      .+.+++..++||++++++|...++++|.+++++|+.++.++++++...++++. .+++++......|.++...++.++++
T Consensus        10 ~~~~~~~~~iWg~~~~~~K~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~   88 (292)
T PRK11272         10 FGALFALYIIWGSTYLVIRIGVESWPPLMMAGVRFLIAGILLLAFLLLRGHPL-PTLRQWLNAALIGLLLLAVGNGMVTV   88 (292)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHhCCCC-CcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            56788889999999999999999999999999999999999998877655443 34567788888888877777788999


Q ss_pred             Hh-hccccccccc-----c------------------------------cc-cCCCCccchHHHHHHHHHHHHHHHHHHH
Q 017782          198 GL-QRTSAGLGSA-----P------------------------------AF-DESNSSLWGSGEWWMLLAAQSMAVGTVM  240 (366)
Q Consensus       198 al-~~~~~~~a~~-----P------------------------------~~-~~~~~~~~~~G~l~allaa~~~a~~~v~  240 (366)
                      +. ++++++.+++     |                              .. .+.+.+....|++++++++++||.|.+.
T Consensus        89 ~~~~~~~a~~a~~l~~~~Pl~~~lla~~~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~~a~~~~~  168 (292)
T PRK11272         89 AEHQNVPSGIAAVVVATVPLFTLCFSRLFGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASWAFGSVW  168 (292)
T ss_pred             HHHccCcHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHHHHHHHHH
Confidence            99 9999988877     2                              01 1112233456999999999999999999


Q ss_pred             HHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHH
Q 017782          241 VRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLS  320 (366)
Q Consensus       241 ~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~s  320 (366)
                      .|+..++ ++...+.+++.++++.+.+.....+.+.    ....+...|..+++.+++++.+++.+|++++|+.++++++
T Consensus       169 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s  243 (292)
T PRK11272        169 SSRLPLP-VGMMAGAAEMLAAGVVLLIASLLSGERL----TALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALAT  243 (292)
T ss_pred             HHhcCCC-cchHHHHHHHHHHHHHHHHHHHHcCCcc----cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHH
Confidence            9998654 4456677888888887777665443321    1123567899999999999999999999999999999999


Q ss_pred             HhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccCC
Q 017782          321 SLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS  365 (366)
Q Consensus       321 ~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~~  365 (366)
                      .+.++||+++++++++++||++++.+++|+++|+.|+++..++++
T Consensus       244 ~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~  288 (292)
T PRK11272        244 SYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999877553

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.95  E-value=1.4e-25  Score=216.00  Aligned_cols=249  Identities=13%  Similarity=0.147  Sum_probs=198.2

Q ss_pred             hHHHHHHHHHHHHHHhhHHHHHHHhhc-CcCHHHHHHHHHHHHHHHHHHHHHHhCC--CCC-CChhHHHHHHHHHHHHHH
Q 017782          114 MLLEWAVLVSPFFFWGTAMVAMKEVLP-KAGTFFVAAFRLIPAGLLLITFASSQGR--KLP-SGFNAWVSIFLFALVDAS  189 (366)
Q Consensus       114 ~~~g~l~llla~~~~g~~~~~~k~~~~-~~~p~~~~~~R~~~a~l~l~~~~~~~~~--~~~-~~~~~~~~~~~~g~l~~~  189 (366)
                      +.+.++.|++..++.+...++.|.+++ +++|+.+.++|+.+++++++++++.+++  +.+ ..++++..+.+.|+++ .
T Consensus        11 ~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g-~   89 (358)
T PLN00411         11 EAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLG-S   89 (358)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHH-H
Confidence            467899999999999999999999988 6999999999999999999998876543  222 2467778888899988 5


Q ss_pred             HHHHHHHHHhhccccccccc-----c---------c-----------------------------cc--CC---------
Q 017782          190 CFQGFLAQGLQRTSAGLGSA-----P---------A-----------------------------FD--ES---------  215 (366)
Q Consensus       190 ~~~~~~~~al~~~~~~~a~~-----P---------~-----------------------------~~--~~---------  215 (366)
                      .++.++++|+++++++++++     |         .                             ..  +.         
T Consensus        90 ~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~  169 (358)
T PLN00411         90 MYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPP  169 (358)
T ss_pred             HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccc
Confidence            67778999999999999998     3         0                             00  00         


Q ss_pred             -------------CCccchHHHHHHHHHHHHHHHHHHHHHHhhcCCCh-HHHHHHHHHHHHHHHHHHHHHhcCCCccccc
Q 017782          216 -------------NSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDP-VMATGWHMVIGGLPLMVISVLNHDPVYGESV  281 (366)
Q Consensus       216 -------------~~~~~~~G~l~allaa~~~a~~~v~~r~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~  281 (366)
                                   ....+..|++++++++++|++|+++.|+..+++++ ...++++++++.+...+.....++.......
T Consensus       170 ~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~  249 (358)
T PLN00411        170 YLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWI  249 (358)
T ss_pred             cccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccce
Confidence                         00112459999999999999999999998777755 4667788888877777666654432111111


Q ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhc
Q 017782          282 KELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN  361 (366)
Q Consensus       282 ~~~~~~~~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~  361 (366)
                      ...+.. ...++|.+++ +.++|.+|++++++.++++++++.+++|+++++++++++||++++.+++|+++|++|++++.
T Consensus       250 ~~~~~~-~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~  327 (358)
T PLN00411        250 IHFDIT-LITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVM  327 (358)
T ss_pred             eccchH-HHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence            223333 3457777765 56799999999999999999999999999999999999999999999999999999999998


Q ss_pred             ccCC
Q 017782          362 FRGS  365 (366)
Q Consensus       362 ~~~~  365 (366)
                      +.++
T Consensus       328 ~~~~  331 (358)
T PLN00411        328 WGKA  331 (358)
T ss_pred             hhhh
Confidence            7664

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.94  E-value=1.1e-24  Score=205.67  Aligned_cols=237  Identities=17%  Similarity=0.141  Sum_probs=177.2

Q ss_pred             HHHHHHHHHHHHHHhhHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHH
Q 017782          115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGF  194 (366)
Q Consensus       115 ~~g~l~llla~~~~g~~~~~~k~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~  194 (366)
                      .++++++++++++||++++..|...++++|..+.++|+.++.++++++..  +++.   ++++++..+.+.++...+..+
T Consensus         3 ~~~~l~~l~a~~~Wg~~~~~~k~~~~~~~P~~~~~~R~~~a~l~l~~~~~--~~~~---~~~~~~~~~~~~l~~~~~~~~   77 (295)
T PRK11689          3 QKATLIGLIAILLWSTMVGLIRGVSESLGPVGGAAMIYSVSGLLLLLTVG--FPRL---RQFPKRYLLAGGLLFVSYEIC   77 (295)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHcc--cccc---ccccHHHHHHHhHHHHHHHHH
Confidence            35688899999999999999999999999999999999999999887641  1111   122233445556666777777


Q ss_pred             HHHHhhc----cccccccc-----c--------------------------------cccCCC-C---------ccchHH
Q 017782          195 LAQGLQR----TSAGLGSA-----P--------------------------------AFDESN-S---------SLWGSG  223 (366)
Q Consensus       195 ~~~al~~----~~~~~a~~-----P--------------------------------~~~~~~-~---------~~~~~G  223 (366)
                      ++.++++    +++.++++     |                                ...++. .         .....|
T Consensus        78 ~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G  157 (295)
T PRK11689         78 LALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLS  157 (295)
T ss_pred             HHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHH
Confidence            8888765    44555444     2                                011111 0         112359


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHH
Q 017782          224 EWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAIS  303 (366)
Q Consensus       224 ~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~  303 (366)
                      ++++++++++||+|.++.||..++.++.....   ..+++.+.+.....+.+     ....+...|..+++.+ ++++++
T Consensus       158 ~~~~l~aa~~~A~~~v~~k~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~-----~~~~~~~~~~~l~~~~-~~t~~~  228 (295)
T PRK11689        158 YGLAFIGAFIWAAYCNVTRKYARGKNGITLFF---ILTALALWIKYFLSPQP-----AMVFSLPAIIKLLLAA-AAMGFG  228 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHhhccCCCCchhHHH---HHHHHHHHHHHHHhcCc-----cccCCHHHHHHHHHHH-HHHHHH
Confidence            99999999999999999999987777765422   22333333333333222     1235667888888888 578999


Q ss_pred             HHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccCC
Q 017782          304 YGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS  365 (366)
Q Consensus       304 ~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~~  365 (366)
                      |.+|++++|+.++++++.+.+++|+++++++++++||+++..+++|+++|+.|+++..+.+|
T Consensus       229 ~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~~  290 (295)
T PRK11689        229 YAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLATR  290 (295)
T ss_pred             HHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhHh
Confidence            99999999999999999999999999999999999999999999999999999988776543

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.94  E-value=3.3e-24  Score=202.79  Aligned_cols=241  Identities=20%  Similarity=0.299  Sum_probs=181.3

Q ss_pred             HHHHHHHHHHHhhHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 017782          118 WAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQ  197 (366)
Q Consensus       118 ~l~llla~~~~g~~~~~~k~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~  197 (366)
                      .++.++++++||++++++|...++++|.++.++|+.+++++++++..+  ++.     .+...+..|++....++.+++.
T Consensus         6 ~l~~l~~~~~Wg~~~~~~k~~~~~~~p~~~~~~R~~~a~~~l~~~~~~--~~~-----~~~~~~~~g~~~~~~~~~~~~~   78 (299)
T PRK11453          6 GVLALLVVVVWGLNFVVIKVGLHNMPPLMLAGLRFMLVAFPAIFFVAR--PKV-----PLNLLLGYGLTISFGQFAFLFC   78 (299)
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhcC--CCC-----chHHHHHHHHHHHHHHHHHHHH
Confidence            456788899999999999999999999999999999988777665421  111     1223444555555556667788


Q ss_pred             Hhhc-cccccccc-----c--------------------------------cccC--CCCccchHHHHHHHHHHHHHHHH
Q 017782          198 GLQR-TSAGLGSA-----P--------------------------------AFDE--SNSSLWGSGEWWMLLAAQSMAVG  237 (366)
Q Consensus       198 al~~-~~~~~a~~-----P--------------------------------~~~~--~~~~~~~~G~l~allaa~~~a~~  237 (366)
                      ++++ .+++.+++     |                                ...+  +.......|++++++++++|++|
T Consensus        79 ~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aal~~a~~  158 (299)
T PRK11453         79 AINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFSWACG  158 (299)
T ss_pred             HHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHHHHHHHH
Confidence            9988 57788776     2                                1111  11122236999999999999999


Q ss_pred             HHHHHHhhcCCCh---HHHHHHHHHHHHHHHHHHHHHhcCCC-cccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 017782          238 TVMVRWVSKYSDP---VMATGWHMVIGGLPLMVISVLNHDPV-YGESVKELTSSDILALLYTSIFGSAISYGVYFYSATK  313 (366)
Q Consensus       238 ~v~~r~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al~~  313 (366)
                      .++.|+..++.+.   .....+.++.+.+.........+.+. ....+...+...|..++|+|+++++++|.+|++++++
T Consensus       159 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~  238 (299)
T PRK11453        159 NIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGR  238 (299)
T ss_pred             HHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999997654432   33445556665555444443333221 1011234567889999999999999999999999999


Q ss_pred             CChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccCC
Q 017782          314 GSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS  365 (366)
Q Consensus       314 ~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~~  365 (366)
                      .++++++.+.++||+++.+++++++||+++..+++|+++|++|+++..+.++
T Consensus       239 ~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~  290 (299)
T PRK11453        239 YETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR  290 (299)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence            9999999999999999999999999999999999999999999999766543

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.92  E-value=4.2e-23  Score=190.92  Aligned_cols=220  Identities=27%  Similarity=0.409  Sum_probs=184.0

Q ss_pred             HhhHHHHHHHhhc-CcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 017782          128 WGTAMVAMKEVLP-KAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGL  206 (366)
Q Consensus       128 ~g~~~~~~k~~~~-~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~al~~~~~~~  206 (366)
                      ||+++++.|...+ +.|+.++.+.|++.+.+++.++...+     .+++++.+.+..|.++...++.++++|++++++++
T Consensus         1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~   75 (260)
T TIGR00950         1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR-----PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGE   75 (260)
T ss_pred             CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc-----cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh
Confidence            8999999999877 58999999999999988888876544     24467778889999888999999999999999999


Q ss_pred             ccc-----c--------------------------------cccCCCCccchHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017782          207 GSA-----P--------------------------------AFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSD  249 (366)
Q Consensus       207 a~~-----P--------------------------------~~~~~~~~~~~~G~l~allaa~~~a~~~v~~r~~~~~~~  249 (366)
                      +++     |                                ....++.+....|++++++++++|+.+.+..|+..++.+
T Consensus        76 ~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~  155 (260)
T TIGR00950        76 AALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKKEG  155 (260)
T ss_pred             hHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCC
Confidence            988     3                                112222344567999999999999999999999887777


Q ss_pred             hH--HHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHhhhhHH
Q 017782          250 PV--MATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTP  327 (366)
Q Consensus       250 ~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~s~~~~l~P  327 (366)
                      +.  ....+++.++.+.+.+.....++.      ...+...|..+++.+++++.++|.+|++++|+.++++++.+.+++|
T Consensus       156 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~p  229 (260)
T TIGR00950       156 PELLQFTGWVLLLGALLLLPFAWFLGPN------PQALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEP  229 (260)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhcCCC------CCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Confidence            43  444567888888877776654432      1235678888999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCChhHHHHHHHHHHHHH
Q 017782          328 MFASIFGFLYLGETFSPLQLVGAAVTVVAIY  358 (366)
Q Consensus       328 v~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~  358 (366)
                      +++++++++++||+++..+++|+++++.|++
T Consensus       230 v~~~ll~~~~~~E~~~~~~~~G~~li~~g~~  260 (260)
T TIGR00950       230 LVALLLGLLILGETLSLPQLIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence            9999999999999999999999999999863

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.91  E-value=2.6e-22  Score=189.54  Aligned_cols=237  Identities=14%  Similarity=0.094  Sum_probs=169.3

Q ss_pred             hhHHHHHHHHHHHHHHhhHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCC-----CChhHHHHHHHHHHHH
Q 017782          113 GMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLP-----SGFNAWVSIFLFALVD  187 (366)
Q Consensus       113 ~~~~g~l~llla~~~~g~~~~~~k~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~-----~~~~~~~~~~~~g~l~  187 (366)
                      ++.+|++++++++++||.+++..|.. ++++|.++.++|++++.+++++++..+++...     ++++.+ ...+.+.++
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   82 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKI-FMLAVSAVL   82 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHH-HHHHHHHHH
Confidence            34679999999999999999999975 67999999999999999988887655432111     122222 234467777


Q ss_pred             HHHHHHHHHHHhhccccccccc-----c-------------------------------cccCCCCccchHHHHHHHHHH
Q 017782          188 ASCFQGFLAQGLQRTSAGLGSA-----P-------------------------------AFDESNSSLWGSGEWWMLLAA  231 (366)
Q Consensus       188 ~~~~~~~~~~al~~~~~~~a~~-----P-------------------------------~~~~~~~~~~~~G~l~allaa  231 (366)
                      .+.++.++++|+++++++++++     |                               .+..+.++    ..+++++++
T Consensus        83 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~----~~~~~l~aa  158 (296)
T PRK15430         83 IGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGS----LPIIALGLA  158 (296)
T ss_pred             HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCC----ccHHHHHHH
Confidence            7888889999999999999988     3                               00111111    125688999


Q ss_pred             HHHHHHHHHHHHhhcCC--ChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017782          232 QSMAVGTVMVRWVSKYS--DPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFY  309 (366)
Q Consensus       232 ~~~a~~~v~~r~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~  309 (366)
                      ++||.|++..|+..++.  +....+.+.+.++.+.....   ...+ .. .....+...+..+++.| +.+.++|.+|++
T Consensus       159 ~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~-~~~~~~~~~~~~~~~~g-~~t~i~~~~~~~  232 (296)
T PRK15430        159 FSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI---ADSS-TS-HMGQNPMSLNLLLIAAG-IVTTVPLLCFTA  232 (296)
T ss_pred             HHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH---ccCC-cc-cccCCcHHHHHHHHHHH-HHHHHHHHHHHH
Confidence            99999999999975322  22333344444444332211   1111 00 01111122334444455 467789999999


Q ss_pred             HhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhc
Q 017782          310 SATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN  361 (366)
Q Consensus       310 al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~  361 (366)
                      ++++.++++++++.|++|+++.+++++++||++++.+++|+++|+.|+.++.
T Consensus       233 a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~  284 (296)
T PRK15430        233 AATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFV  284 (296)
T ss_pred             HHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999988876654

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.89  E-value=9.5e-21  Score=167.19  Aligned_cols=237  Identities=19%  Similarity=0.241  Sum_probs=204.3

Q ss_pred             HHHHHHHHHHHHhhHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 017782          117 EWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLA  196 (366)
Q Consensus       117 g~l~llla~~~~g~~~~~~k~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~  196 (366)
                      +++.++.+++.--....+.|.+.+.+++.....+|..+++++++++.+..+++  ..+++++.....|+.. +.++.+||
T Consensus        13 p~~~ll~amvsiq~Gas~Ak~LFP~vG~~g~t~lRl~~aaLIll~l~RPwr~r--~~~~~~~~~~~yGvsL-g~MNl~FY   89 (292)
T COG5006          13 PILALLVAMVSIQSGASFAKSLFPLVGAAGVTALRLAIAALILLALFRPWRRR--LSKPQRLALLAYGVSL-GGMNLLFY   89 (292)
T ss_pred             cHHHHHHHHHHHHhhHHHHHHHccccChhhHHHHHHHHHHHHHHHHhhHHHhc--cChhhhHHHHHHHHHH-HHHHHHHH
Confidence            68888999999999999999999999999999999999999999988665533  3557888999999875 55666999


Q ss_pred             HHhhccccccccc-----c----------------------------cccCCCCccchHHHHHHHHHHHHHHHHHHHHHH
Q 017782          197 QGLQRTSAGLGSA-----P----------------------------AFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRW  243 (366)
Q Consensus       197 ~al~~~~~~~a~~-----P----------------------------~~~~~~~~~~~~G~l~allaa~~~a~~~v~~r~  243 (366)
                      .++++.|.+.+..     |                            ....+.......|..++++++.||+.|++..||
T Consensus        90 ~si~riPlGiAVAiEF~GPL~vA~~~sRr~~d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r  169 (292)
T COG5006          90 LSIERIPLGIAVAIEFTGPLAVALLSSRRLRDFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQR  169 (292)
T ss_pred             HHHHhccchhhhhhhhccHHHHHHHhccchhhHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcch
Confidence            9999999999876     3                            112233455668999999999999999999999


Q ss_pred             hhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHhh
Q 017782          244 VSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLT  323 (366)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~s~~~  323 (366)
                      ..+..+...-+...+.+++++.+++......+.      -.++.-...-+..+++++.+.|.+...++++.+....+.++
T Consensus       170 ~g~~~~g~~g~a~gm~vAaviv~Pig~~~ag~~------l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~Ll  243 (292)
T COG5006         170 AGRAEHGTAGVAVGMLVAALIVLPIGAAQAGPA------LFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLL  243 (292)
T ss_pred             hcccCCCchHHHHHHHHHHHHHhhhhhhhcchh------hcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHH
Confidence            988888889999999999999999988665553      34566667777889999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcc
Q 017782          324 FLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF  362 (366)
Q Consensus       324 ~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~  362 (366)
                      .+||.++++.|++++||++++.||+|.++|+.+..-..+
T Consensus       244 SLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~l  282 (292)
T COG5006         244 SLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTL  282 (292)
T ss_pred             HhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcccc
Confidence            999999999999999999999999999999998875443

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.86  E-value=7.8e-20  Score=171.40  Aligned_cols=235  Identities=15%  Similarity=0.152  Sum_probs=169.2

Q ss_pred             HHHHHHHHHHHhhHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHh--CCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 017782          118 WAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQ--GRKLPSGFNAWVSIFLFALVDASCFQGFL  195 (366)
Q Consensus       118 ~l~llla~~~~g~~~~~~k~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~--~~~~~~~~~~~~~~~~~g~l~~~~~~~~~  195 (366)
                      .++.++++++|+..++..|...++-++.  .++++..+.+++.|+...+  ++..+..++++....+.+.++...++.++
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKEPDF--LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGL   80 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCchhHH--HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHH
Confidence            5678899999999999999666654443  4777778888888877664  22223233445555556666677888899


Q ss_pred             HHHhhccccccccc-----c--------------------------------cccCCCCccchHHHHHHHHHHHHHHHHH
Q 017782          196 AQGLQRTSAGLGSA-----P--------------------------------AFDESNSSLWGSGEWWMLLAAQSMAVGT  238 (366)
Q Consensus       196 ~~al~~~~~~~a~~-----P--------------------------------~~~~~~~~~~~~G~l~allaa~~~a~~~  238 (366)
                      +.|+++++++.+++     |                                ....+.......|+.++++++++|++|.
T Consensus        81 ~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~~  160 (281)
T TIGR03340        81 AQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIYS  160 (281)
T ss_pred             HHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhh
Confidence            99999999999986     2                                0111122233468889999999999999


Q ss_pred             HHHHHhhcCCChHH----HHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 017782          239 VMVRWVSKYSDPVM----ATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKG  314 (366)
Q Consensus       239 v~~r~~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al~~~  314 (366)
                      +..|+..++.++..    .+.+.++..++...+.....+...     .......+..+++.+.+++.++|.+|++++++.
T Consensus       161 i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~  235 (281)
T TIGR03340       161 LSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRS-----MFPYARQILPSATLGGLMIGGAYALVLWAMTRL  235 (281)
T ss_pred             hhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhccc-----hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence            99998654444322    223333333222222222222111     112233556677888899999999999999999


Q ss_pred             ChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHH
Q 017782          315 SLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYL  359 (366)
Q Consensus       315 ~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l  359 (366)
                      ++++++.+.+++|+++.+++++++||+++..+++|+++|+.|+++
T Consensus       236 ~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       236 PVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             CceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            999999999999999999999999999999999999999999976

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.85  E-value=3.7e-19  Score=168.54  Aligned_cols=231  Identities=13%  Similarity=0.117  Sum_probs=173.9

Q ss_pred             HHHHHhhcC-cCHHHHHHHHHHHHHHHHHHHHHH-hCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccccccc-
Q 017782          133 VAMKEVLPK-AGTFFVAAFRLIPAGLLLITFASS-QGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSA-  209 (366)
Q Consensus       133 ~~~k~~~~~-~~p~~~~~~R~~~a~l~l~~~~~~-~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~al~~~~~~~a~~-  209 (366)
                      ..-|+++++ ..|..+.++|+.++.+++.+.... ..++.+.+++++...+..|++. +.++.+.++++++++++.+++ 
T Consensus        19 ~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~l~~~s~s~~~li   97 (302)
T TIGR00817        19 IYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVH-TIGHVTSNVSLSKVAVSFTHTI   97 (302)
T ss_pred             HHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHhccHHHHHHH
Confidence            578999987 779999999999988776665321 1233344678899999999996 667789999999999999988 


Q ss_pred             ----c-------------------------------cccCCCCccchHHHHHHHHHHHHHHHHHHHHHHhhc--CCChHH
Q 017782          210 ----P-------------------------------AFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSK--YSDPVM  252 (366)
Q Consensus       210 ----P-------------------------------~~~~~~~~~~~~G~l~allaa~~~a~~~v~~r~~~~--~~~~~~  252 (366)
                          |                               .....+.+....|++++++++++|++|.+..|+..+  ++|+..
T Consensus        98 ~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~  177 (302)
T TIGR00817        98 KAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTN  177 (302)
T ss_pred             HhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccc
Confidence                3                               011122233356999999999999999999999877  789999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCccc-cccc----CCHH-HHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHhhhhH
Q 017782          253 ATGWHMVIGGLPLMVISVLNHDPVYGE-SVKE----LTSS-DILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLT  326 (366)
Q Consensus       253 ~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~----~~~~-~~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~s~~~~l~  326 (366)
                      .+.++...+++.+.+.....++..... ....    .... .+...+..+..+....+.++++++++.++++.+++.+++
T Consensus       178 ~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~  257 (302)
T TIGR00817       178 LYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMK  257 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhh
Confidence            999999999998888877654322100 0000    0111 122122333223333335666899999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782          327 PMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG  364 (366)
Q Consensus       327 Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~  364 (366)
                      |+++++++++++||+++..+++|++++++|++++++.|
T Consensus       258 pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k  295 (302)
T TIGR00817       258 RVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVK  295 (302)
T ss_pred             hhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999988755

specificities overlap.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.83  E-value=2.2e-18  Score=166.26  Aligned_cols=248  Identities=11%  Similarity=0.065  Sum_probs=180.7

Q ss_pred             HHHHHHHHHHHHHHhhHHHHHHHhhcCcC-HHHHHHHHHHHHHHHHHHHHHHhCCCCCC---ChhHHHHHHHHHHHHHHH
Q 017782          115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAG-TFFVAAFRLIPAGLLLITFASSQGRKLPS---GFNAWVSIFLFALVDASC  190 (366)
Q Consensus       115 ~~g~l~llla~~~~g~~~~~~k~~~~~~~-p~~~~~~R~~~a~l~l~~~~~~~~~~~~~---~~~~~~~~~~~g~l~~~~  190 (366)
                      .+..++.+.--.+=.......|.+++.++ |..+..+|++++.++...+.....++.++   .++.++..+..|+++...
T Consensus        48 ~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~~~  127 (350)
T PTZ00343         48 WKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHLFV  127 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            44444444444444555778899999999 99999999999988765554332222221   235678888999988776


Q ss_pred             HHHHHHHHhhccccccccc-----c-------------------------------cccCCCCccchHHHHHHHHHHHHH
Q 017782          191 FQGFLAQGLQRTSAGLGSA-----P-------------------------------AFDESNSSLWGSGEWWMLLAAQSM  234 (366)
Q Consensus       191 ~~~~~~~al~~~~~~~a~~-----P-------------------------------~~~~~~~~~~~~G~l~allaa~~~  234 (366)
                      +. ..+.++++++++.+.+     |                               .....+.+....|+++++++++++
T Consensus       128 ~~-~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~~~  206 (350)
T PTZ00343        128 HF-GAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLGS  206 (350)
T ss_pred             HH-HHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHHHH
Confidence            55 4679999999999888     3                               011122333456999999999999


Q ss_pred             HHHHHHHHHhhcC-------CChHHHHHHHHHHHHHHHHHHHHHhcCCCccccc----ccCCHHHHHHHHHHHHHHHHHH
Q 017782          235 AVGTVMVRWVSKY-------SDPVMATGWHMVIGGLPLMVISVLNHDPVYGESV----KELTSSDILALLYTSIFGSAIS  303 (366)
Q Consensus       235 a~~~v~~r~~~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ll~~gv~~~~l~  303 (366)
                      +++.+..|+..++       .++.....+..+.+++.++++....+.......+    ...+...+..+++ .++.+++.
T Consensus       207 a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~-~i~~s~l~  285 (350)
T PTZ00343        207 SLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIF-KIFFSGVW  285 (350)
T ss_pred             HHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHH-HHHHHHHH
Confidence            9999999997654       4566666777889998888887654432111000    0111112233344 34667889


Q ss_pred             HHHHHH----HhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782          304 YGVYFY----SATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG  364 (366)
Q Consensus       304 ~~l~~~----al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~  364 (366)
                      +++++.    +++++++...++..+++|+++++++++++||++++.+++|++++++|++++++-|
T Consensus       286 ~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~k  350 (350)
T PTZ00343        286 YYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLFK  350 (350)
T ss_pred             HHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhcC
Confidence            999995    9999999999999999999999999999999999999999999999999987643

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.82  E-value=1.3e-17  Score=155.68  Aligned_cols=244  Identities=27%  Similarity=0.396  Sum_probs=186.7

Q ss_pred             hHHHHHHHHHHHHHHhhHHHHHHHhhcC-cCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHH
Q 017782          114 MLLEWAVLVSPFFFWGTAMVAMKEVLPK-AGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQ  192 (366)
Q Consensus       114 ~~~g~l~llla~~~~g~~~~~~k~~~~~-~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~  192 (366)
                      ...+...+++..+.|+......|...++ .++....+.|+..+.++..+....++.......+.+....+.+.+......
T Consensus         5 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (292)
T COG0697           5 LLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPF   84 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHH
Confidence            3456778888889999999999988886 777887888999988885544433321122222235567777777788888


Q ss_pred             HHHHHHhhccccccccc-----c--------------------------------cccCCCCcc---chHHHHHHHHHHH
Q 017782          193 GFLAQGLQRTSAGLGSA-----P--------------------------------AFDESNSSL---WGSGEWWMLLAAQ  232 (366)
Q Consensus       193 ~~~~~al~~~~~~~a~~-----P--------------------------------~~~~~~~~~---~~~G~l~allaa~  232 (366)
                      .+++.++++++++.+++     |                                .....+...   ...|+++++++++
T Consensus        85 ~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~  164 (292)
T COG0697          85 LLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAAL  164 (292)
T ss_pred             HHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHH
Confidence            89999999999999977     2                                011112211   3579999999999


Q ss_pred             HHHHHHHHHHHhhcCCChHHHHH-HHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017782          233 SMAVGTVMVRWVSKYSDPVMATG-WHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSA  311 (366)
Q Consensus       233 ~~a~~~v~~r~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al  311 (366)
                      +++++.+..|+.. +.++..... +.+.  ...............     .+.+...|..+.+.|++++++++.++++++
T Consensus       165 ~~a~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~  236 (292)
T COG0697         165 LWALYTALVKRLS-RLGPVTLALLLQLL--LALLLLLLFFLSGFG-----APILSRAWLLLLYLGVFSTGLAYLLWYYAL  236 (292)
T ss_pred             HHHHHHHHHHHhc-CCChHHHHHHHHHH--HHHHHHHHHHhcccc-----ccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999987 667766666 4444  222222222211110     244677889999999999999999999999


Q ss_pred             ccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccCC
Q 017782          312 TKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS  365 (366)
Q Consensus       312 ~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~~  365 (366)
                      ++.+++.++++.+++|+++++++++++||+++..+++|+++|+.|+.+..++++
T Consensus       237 ~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~~~  290 (292)
T COG0697         237 RLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLRAR  290 (292)
T ss_pred             HhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcccc
Confidence            999999999999999999999999999999999999999999999999987654

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.82  E-value=8.5e-22  Score=174.83  Aligned_cols=243  Identities=15%  Similarity=0.141  Sum_probs=198.2

Q ss_pred             hhHHHHHHHHHHHHHHhhHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHH
Q 017782          113 GMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQ  192 (366)
Q Consensus       113 ~~~~g~l~llla~~~~g~~~~~~k~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~  192 (366)
                      ++.+|.+++.++ ..+.+..++.+. .-+.+|.+..-.|+++-.++..|..++++.....+.....+++++|+.|..+.+
T Consensus        35 ~p~~gl~l~~vs-~ff~~~~vv~t~-~~e~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R~~LiLRg~mG~tgvm  112 (346)
T KOG4510|consen   35 KPNLGLLLLTVS-YFFNSCMVVSTK-VLENDPMELASFRLLVRMLITYPCLIYYMQPVIGPEGKRKWLILRGFMGFTGVM  112 (346)
T ss_pred             CCccCceehhhH-HHHhhHHHhhhh-hhccChhHhhhhhhhhehhhhheEEEEEeeeeecCCCcEEEEEeehhhhhhHHH
Confidence            456778888787 667777777663 447899999999999999999998888776543333455677889999887776


Q ss_pred             HHHHHHhhccccccccc-----c-------------------------------------cc--------cCCCCccchH
Q 017782          193 GFLAQGLQRTSAGLGSA-----P-------------------------------------AF--------DESNSSLWGS  222 (366)
Q Consensus       193 ~~~~~al~~~~~~~a~~-----P-------------------------------------~~--------~~~~~~~~~~  222 (366)
                       ..||+++|++.++|++     |                                     .+        +.++.+....
T Consensus       113 -lmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~  191 (346)
T KOG4510|consen  113 -LMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIP  191 (346)
T ss_pred             -HHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCC
Confidence             7799999999999998     1                                     11        1111133446


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHH
Q 017782          223 GEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAI  302 (366)
Q Consensus       223 G~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l  302 (366)
                      |.+.++.++++.|.-.++.|++.|+.|....+.|..+++.+..++.....+...     .+..+.+|+.++.+|+++ ++
T Consensus       192 gt~aai~s~lf~asvyIilR~iGk~~h~~msvsyf~~i~lV~s~I~~~~ig~~~-----lP~cgkdr~l~~~lGvfg-fi  265 (346)
T KOG4510|consen  192 GTVAAISSVLFGASVYIILRYIGKNAHAIMSVSYFSLITLVVSLIGCASIGAVQ-----LPHCGKDRWLFVNLGVFG-FI  265 (346)
T ss_pred             chHHHHHhHhhhhhHHHHHHHhhccccEEEEehHHHHHHHHHHHHHHhhcccee-----cCccccceEEEEEehhhh-hH
Confidence            899999999999999999999999999999999999999998887776655432     244677888888899765 66


Q ss_pred             HHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782          303 SYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG  364 (366)
Q Consensus       303 ~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~  364 (366)
                      +|.+.+.++|+..|..++++.+++.++|.+++++++||.|+++.|+|+++|+.+.+.+.++|
T Consensus       266 gQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~k  327 (346)
T KOG4510|consen  266 GQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKK  327 (346)
T ss_pred             HHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999998876543

>TIGR00688 rarD rarD protein

Probab=99.80  E-value=1.4e-17  Score=153.90  Aligned_cols=210  Identities=12%  Similarity=0.008  Sum_probs=144.7

Q ss_pred             HHHHHHHHHHHHHhhHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHhCCCC------C-CChhH-HHHHHHHHHHH
Q 017782          116 LEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKL------P-SGFNA-WVSIFLFALVD  187 (366)
Q Consensus       116 ~g~l~llla~~~~g~~~~~~k~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~------~-~~~~~-~~~~~~~g~l~  187 (366)
                      +|++++++++++||++++++|. .++++|.++.++|++++.+++.+++..++++.      + .++++ +....+.|++ 
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LKPLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL-   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH-
Confidence            4789999999999999999997 56799999999999999988877664433211      1 11222 3345555555 


Q ss_pred             HHHHHHHHHHHhhccccccccc-----c-------------------------------cccCCCCccchHHHHHHHHHH
Q 017782          188 ASCFQGFLAQGLQRTSAGLGSA-----P-------------------------------AFDESNSSLWGSGEWWMLLAA  231 (366)
Q Consensus       188 ~~~~~~~~~~al~~~~~~~a~~-----P-------------------------------~~~~~~~~~~~~G~l~allaa  231 (366)
                      .+.++.++++|+++++++++++     |                               ....+..+ .   .+++++++
T Consensus        80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~-~---~~~~l~aa  155 (256)
T TIGR00688        80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGS-L---PWEALVLA  155 (256)
T ss_pred             HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCC-c---hHHHHHHH
Confidence            5677889999999999999988     3                               00111111 1   24688999


Q ss_pred             HHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017782          232 QSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSA  311 (366)
Q Consensus       232 ~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al  311 (366)
                      ++|+.|.+..|+..++ +........ +.............+.+..   .......+|..+++.|++ +.++|.++++++
T Consensus       156 ~~~a~~~i~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~g~~-t~i~~~l~~~a~  229 (256)
T TIGR00688       156 FSFTAYGLIRKALKNT-DLAGFCLET-LSLMPVAIYYLLQTDFATV---QQTNPFPIWLLLVLAGLI-TGTPLLAFVIAA  229 (256)
T ss_pred             HHHHHHHHHHhhcCCC-CcchHHHHH-HHHHHHHHHHHHHhccCcc---cccCchhHHHHHHHHHHH-HHHHHHHHHHHH
Confidence            9999999999998643 332222111 1111111111111111110   011123478888888866 788999999999


Q ss_pred             ccCChhhHHHhhhhHHHHHHHHHHHH
Q 017782          312 TKGSLTKLSSLTFLTPMFASIFGFLY  337 (366)
Q Consensus       312 ~~~~a~~~s~~~~l~Pv~a~i~~~l~  337 (366)
                      |+.++++++++.|+||++++++++++
T Consensus       230 ~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       230 NRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999875

This uncharacterized protein is predicted to have many membrane-spanning domains.

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.70  E-value=6.2e-15  Score=138.75  Aligned_cols=232  Identities=15%  Similarity=0.135  Sum_probs=168.6

Q ss_pred             HHHHHHHHHHHHhhHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 017782          117 EWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLA  196 (366)
Q Consensus       117 g~l~llla~~~~g~~~~~~k~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~  196 (366)
                      ++++.++++++||+..+..|... +.++.++.  |..++.+++..+....+++....++.+...++.|++ .+..+.+++
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~-g~~~~~~~--~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~l~G~~-w~ig~~~~~   77 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG-GGPYSQTL--GTTFGALILSIAIAIFVLPEFWALSIFLVGLLSGAF-WALGQINQF   77 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC-CCHHHHHH--HHHHHHHHHHHHHHHHhCCcccccHHHHHHHHHHHH-HHhhhhhHH
Confidence            47889999999999999999765 77777765  788888877665544333222223444555555555 455667999


Q ss_pred             HHhhccccccccc---------------------c----------------------cc-cCCCC-----ccchHHHHHH
Q 017782          197 QGLQRTSAGLGSA---------------------P----------------------AF-DESNS-----SLWGSGEWWM  227 (366)
Q Consensus       197 ~al~~~~~~~a~~---------------------P----------------------~~-~~~~~-----~~~~~G~l~a  227 (366)
                      .+.++++.+.+..                     +                      .. .+++.     ....+|.+++
T Consensus        78 ~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~~~  157 (290)
T TIGR00776        78 KSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGILLL  157 (290)
T ss_pred             HHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHHHH
Confidence            9999999998832                     0                      00 11110     2236899999


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCChHHHHHHHHH---HHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHH
Q 017782          228 LLAAQSMAVGTVMVRWVSKYSDPVMATGWHMV---IGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISY  304 (366)
Q Consensus       228 llaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~  304 (366)
                      ++++++|+.|.+..|+.  ++++...++.+..   +++++..... ...+        +...+.+...+..|++ .++++
T Consensus       158 l~sg~~y~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~--------~~~~~~~~~~~~~Gi~-~~ia~  225 (290)
T TIGR00776       158 LMSTIGYLVYVVVAKAF--GVDGLSVLLPQAIGMVIGGIIFNLGH-ILAK--------PLKKYAILLNILPGLM-WGIGN  225 (290)
T ss_pred             HHHHHHHHHHHHHHHHc--CCCcceehhHHHHHHHHHHHHHHHHH-hccc--------chHHHHHHHHHHHHHH-HHHHH
Confidence            99999999999999986  4788777555444   3333322221 1011        1123344344448877 79999


Q ss_pred             HHHHHHhc-cCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHH----HHHHHHHHHHHHhcccC
Q 017782          305 GVYFYSAT-KGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQL----VGAAVTVVAIYLVNFRG  364 (366)
Q Consensus       305 ~l~~~al~-~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~----vG~~lIl~g~~l~~~~~  364 (366)
                      .+|..+.+ +.+++.++++.++||+.+.+++++++||+.+..|+    +|.++|+.|+.++...|
T Consensus       226 ~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~~~  290 (290)
T TIGR00776       226 FFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGIGK  290 (290)
T ss_pred             HHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhccC
Confidence            99999999 99999999999999999999999999999999999    99999999999876543

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.67  E-value=5.8e-14  Score=133.18  Aligned_cols=249  Identities=16%  Similarity=0.088  Sum_probs=190.1

Q ss_pred             hhhHHHHHHHHHHHHHHhhHHHHHHHhhc-CcC-HHHHHHHHHHHHHHHHHHHHHHhCCCC---CCChhHHHHHHHHHHH
Q 017782          112 LGMLLEWAVLVSPFFFWGTAMVAMKEVLP-KAG-TFFVAAFRLIPAGLLLITFASSQGRKL---PSGFNAWVSIFLFALV  186 (366)
Q Consensus       112 ~~~~~g~l~llla~~~~g~~~~~~k~~~~-~~~-p~~~~~~R~~~a~l~l~~~~~~~~~~~---~~~~~~~~~~~~~g~l  186 (366)
                      ++.++..++.=..+++-..+......+.+ +.+ |....++-++.-.++..+....|+...   ...+++|++.++++++
T Consensus         9 ~~~~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~   88 (334)
T PF06027_consen    9 RRFWIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALL   88 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHH
Confidence            34455666666666666777777776555 343 666677777776777777666654321   2234778888899999


Q ss_pred             HHHHHHHHHHHHhhccccccccc------c------------------------------------cccC---CCCccch
Q 017782          187 DASCFQGFLAQGLQRTSAGLGSA------P------------------------------------AFDE---SNSSLWG  221 (366)
Q Consensus       187 ~~~~~~~~~~~al~~~~~~~a~~------P------------------------------------~~~~---~~~~~~~  221 (366)
                      .....+ +.+.|++||+.+.+.+      |                                    ...+   .+.+...
T Consensus        89 Dv~aN~-~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i  167 (334)
T PF06027_consen   89 DVEANY-LVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPI  167 (334)
T ss_pred             HHHHHH-HHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccc
Confidence            876655 8999999999999888      2                                    0111   1234556


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHH
Q 017782          222 SGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSA  301 (366)
Q Consensus       222 ~G~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~  301 (366)
                      +||+++++++++||+++++.++..++.+.....++..+++.++..+...+.+...+..  .+++...+..++..+ ++..
T Consensus       168 ~GDll~l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~--~~w~~~~~~~~v~~~-~~lf  244 (334)
T PF06027_consen  168 LGDLLALLGAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISGIQLAILERSGIES--IHWTSQVIGLLVGYA-LCLF  244 (334)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHheehhhhhc--cCCChhhHHHHHHHH-HHHH
Confidence            8999999999999999999999888899999999999999999888877766554432  233444444433333 5667


Q ss_pred             HHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782          302 ISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG  364 (366)
Q Consensus       302 l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~  364 (366)
                      +-|.+....++..+|+...+-..+..+++++++++++|+++++..++|.++|+.|.+++...+
T Consensus       245 ~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~  307 (334)
T PF06027_consen  245 LFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAE  307 (334)
T ss_pred             HHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccC
Confidence            788888999999999999999999999999999999999999999999999999999987654

Some of the sequences in this family are annotated as putative membrane proteins.

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.65  E-value=1.6e-15  Score=120.75  Aligned_cols=137  Identities=20%  Similarity=0.319  Sum_probs=124.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHH
Q 017782          223 GEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAI  302 (366)
Q Consensus       223 G~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l  302 (366)
                      -.++++++|+++++..+..|-..++.||...+..+.++..+.+..+.+..++...   ....+.+.|..+...| +.+++
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~---~~~~~~k~~lflilSG-la~gl   79 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQA---GGEIGPKSWLFLILSG-LAGGL   79 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceec---ccccCcceehhhhHHH-HHHHH
Confidence            4689999999999999999998899999999999999999999988888766532   2345788899999888 77889


Q ss_pred             HHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhccc
Q 017782          303 SYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFR  363 (366)
Q Consensus       303 ~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~  363 (366)
                      +..+|++|+|..+++.+.++.-+.|+++++++++++||+++..+++|+.+|+.|.+++.++
T Consensus        80 swl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~~  140 (140)
T COG2510          80 SWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSLR  140 (140)
T ss_pred             HHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEecC
Confidence            9999999999999999999999999999999999999999999999999999999887653

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.64  E-value=1.2e-13  Score=125.52  Aligned_cols=241  Identities=16%  Similarity=0.162  Sum_probs=189.1

Q ss_pred             HHHHHHHHHHHHHHhhHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHhCCCC-----CCChhHHHHHHHHHHHHHH
Q 017782          115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKL-----PSGFNAWVSIFLFALVDAS  189 (366)
Q Consensus       115 ~~g~l~llla~~~~g~~~~~~k~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~-----~~~~~~~~~~~~~g~l~~~  189 (366)
                      .+|+++.+.+-++||..+...| +++++++.++...|.+.+..+++..+...++..     .++++.+....+.+++ .+
T Consensus         6 ~~Gil~~l~Ay~lwG~lp~y~k-ll~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l-i~   83 (293)
T COG2962           6 RKGILLALLAYLLWGLLPLYFK-LLEPLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL-IG   83 (293)
T ss_pred             cchhHHHHHHHHHHHHHHHHHH-HHccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH-HH
Confidence            5799999999999999999999 678999999999999999988877665544322     2334555555555554 57


Q ss_pred             HHHHHHHHHhhccccccccc-----cc---------cc----------------CCCCccchHH--HHHHHHHHHHHHHH
Q 017782          190 CFQGFLAQGLQRTSAGLGSA-----PA---------FD----------------ESNSSLWGSG--EWWMLLAAQSMAVG  237 (366)
Q Consensus       190 ~~~~~~~~al~~~~~~~a~~-----P~---------~~----------------~~~~~~~~~G--~l~allaa~~~a~~  237 (366)
                      .....|.+|..+-..-++++     |.         +.                +-....+..|  -+.++.-+++|+.|
T Consensus        84 ~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~la~sf~~Y  163 (293)
T COG2962          84 LNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVALALALSFGLY  163 (293)
T ss_pred             HHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Confidence            78889999999999999998     51         00                0000111111  25678889999999


Q ss_pred             HHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChh
Q 017782          238 TVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLT  317 (366)
Q Consensus       238 ~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al~~~~a~  317 (366)
                      ...-|++  ++|+.+-.+..++.-..+.+.+....++...  .....+...+..++..|. .|.++..+|..|-|+++-+
T Consensus       164 gl~RK~~--~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~--~~~~~~~~~~~LLv~aG~-vTavpL~lf~~aa~~lpls  238 (293)
T COG2962         164 GLLRKKL--KVDALTGLTLETLLLLPVALIYLLFLADSGQ--FLQQNANSLWLLLVLAGL-VTAVPLLLFAAAAKRLPLS  238 (293)
T ss_pred             HHHHHhc--CCchHHhHHHHHHHHhHHHHHHHHHHhcCch--hhhcCCchHHHHHHHhhH-HHHHHHHHHHHHHhcCCHH
Confidence            9887776  6889999999999888888888776655531  112235667778888885 5678999999999999999


Q ss_pred             hHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcc
Q 017782          318 KLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF  362 (366)
Q Consensus       318 ~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~  362 (366)
                      ..+.++|.||..-.+++++++||+++..+++.-++|..|..+...
T Consensus       239 ~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~  283 (293)
T COG2962         239 TLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSI  283 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999988653

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.55  E-value=4.9e-14  Score=114.93  Aligned_cols=125  Identities=30%  Similarity=0.560  Sum_probs=110.7

Q ss_pred             HHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017782          232 QSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSA  311 (366)
Q Consensus       232 ~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al  311 (366)
                      ++||.+.+..|+..++.|+...++++++.+.+ ..+.....+...    ....+...+...++.+++++.+++.++++++
T Consensus         1 ~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~   75 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKISPLSITFWRFLIAGI-LLILLLILGRKP----FKNLSPRQWLWLLFLGLLGTALAYLLYFYAL   75 (126)
T ss_pred             ceeeeHHHHHHHHhccCCHHHHHHHHHHHHHH-HHHHHHhhcccc----ccCCChhhhhhhhHhhccceehHHHHHHHHH
Confidence            46899999999998889999999999999998 666655544432    2466777888888899888899999999999


Q ss_pred             ccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhc
Q 017782          312 TKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN  361 (366)
Q Consensus       312 ~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~  361 (366)
                      ++.++++++++.+++|+++.++++++++|++++.+++|.++++.|++++.
T Consensus        76 ~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   76 KYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999998864

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.33  E-value=7.1e-11  Score=110.47  Aligned_cols=253  Identities=16%  Similarity=0.097  Sum_probs=182.0

Q ss_pred             hhhhhHHHHHHHHHHHHHHhhHHHHHHHhhcCcC---HHHHHHHHHHHHHHHHHHHH-------HHhCC--C--------
Q 017782          110 MELGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAG---TFFVAAFRLIPAGLLLITFA-------SSQGR--K--------  169 (366)
Q Consensus       110 ~~~~~~~g~l~llla~~~~g~~~~~~k~~~~~~~---p~~~~~~R~~~a~l~l~~~~-------~~~~~--~--------  169 (366)
                      ++.++..|+.++++..++|-.+.-+.+.+.++-+   |+.......-.-.+.+.++.       ...+|  +        
T Consensus         8 ~~~r~~lGl~lL~~V~viWV~SSeLT~~if~~~~f~kPFfiTY~~ts~fivYL~~~~~~d~~~~~~~~R~~~~~~~~~~e   87 (416)
T KOG2765|consen    8 KRWRWTLGLVLLLLVVVIWVASSELTQSIFEDYNFRKPFFITYLKTSLFIVYLPPFILIDAPWRILETRSKRSNHAIMEE   87 (416)
T ss_pred             hhhHHHHHHHHHHHHHHHHHhHHHHHHHHHhhcccCCceeEeeecccceehhhhhhhhhcchhhhhhhhccccchhhhhh
Confidence            4456788999999999999999999999988644   77766655433333333322       11001  0        


Q ss_pred             ---------------------------------------------------CC-CCh------------hHHHHHHHHHH
Q 017782          170 ---------------------------------------------------LP-SGF------------NAWVSIFLFAL  185 (366)
Q Consensus       170 ---------------------------------------------------~~-~~~------------~~~~~~~~~g~  185 (366)
                                                                         .+ +.+            +.....+..+.
T Consensus        88 ~d~e~y~~~~~~~~~~~~~l~~~~~~~~~~~~l~s~~~~~~~s~~~e~~~~~~~~~rs~l~~~~~~t~~~~ak~sl~fc~  167 (416)
T KOG2765|consen   88 ADAEGYFSACTTDKTMESGLSGPESVPDKSPLLGSGEEEKPESTNLEVREKANTKKRSNLKERGKLTATQTAKLSLFFCP  167 (416)
T ss_pred             hhhhccccccccccccccccCCceeeeccccccccccccCCCCccccccccCCcccccchhhhhhhHHHHHHHHHHHHHH
Confidence                                                               00 001            11233455566


Q ss_pred             HHHHHHHHHHHHHhhccccccccc----------------c----------------------ccc------CCCCccch
Q 017782          186 VDASCFQGFLAQGLQRTSAGLGSA----------------P----------------------AFD------ESNSSLWG  221 (366)
Q Consensus       186 l~~~~~~~~~~~al~~~~~~~a~~----------------P----------------------~~~------~~~~~~~~  221 (366)
                      +++. .+.++..||.+|+++..++                |                      ..+      ....+...
T Consensus       168 lWF~-anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~~~l  246 (416)
T KOG2765|consen  168 LWFL-ANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPASRPL  246 (416)
T ss_pred             HHHH-HHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCCccchh
Confidence            6644 4458899999999988877                2                      011      12334456


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhc----CCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHH
Q 017782          222 SGEWWMLLAAQSMAVGTVMVRWVSK----YSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSI  297 (366)
Q Consensus       222 ~G~l~allaa~~~a~~~v~~r~~~~----~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv  297 (366)
                      .|+++++++|+.||+|.++.|+-..    ++|.-...++..++..+++++..++.+....+. ..-++..+...++..++
T Consensus       247 lG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~-F~lP~~~q~~~vv~~~l  325 (416)
T KOG2765|consen  247 LGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEER-FELPSSTQFSLVVFNNL  325 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCc-ccCCCCceeEeeeHhhH
Confidence            8999999999999999999998543    346666677777777777776555443322211 12334445566777889


Q ss_pred             HHHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782          298 FGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG  364 (366)
Q Consensus       298 ~~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~  364 (366)
                      ++++++-++|.+|.-..++..+++-+.++...+++...++-|.++++.+++|++.|++|.++++..+
T Consensus       326 igtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~  392 (416)
T KOG2765|consen  326 IGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISS  392 (416)
T ss_pred             HHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccc
Confidence            9999999999999999999999999999999999999999999999999999999999999998765

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.22  E-value=4.7e-10  Score=105.19  Aligned_cols=133  Identities=16%  Similarity=0.186  Sum_probs=101.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhc-CCCcccccccCCHHHHHHHHHHHHHHHHH
Q 017782          224 EWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNH-DPVYGESVKELTSSDILALLYTSIFGSAI  302 (366)
Q Consensus       224 ~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~gv~~~~l  302 (366)
                      .++.+++++++|...+.+|+..++.++.  ..+.....++...++..... ...    +...+...|..++ .+.++...
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~   75 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKEPDF--LWWALLAHSVLLTPYGLWYLAQVG----WSRLPATFWLLLA-ISAVANMV   75 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCchhHH--HHHHHHHHHHHHHHHHHHhcccCC----CCCcchhhHHHHH-HHHHHHHH
Confidence            4678999999999999999876665443  35555555656655554321 111    1223333444444 45466777


Q ss_pred             HHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhccc
Q 017782          303 SYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFR  363 (366)
Q Consensus       303 ~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~  363 (366)
                      .+.++++++++.+++.++++.+++|+++++++++++||+++..+++|.++++.|++++..+
T Consensus        76 ~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~  136 (281)
T TIGR03340        76 YFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLS  136 (281)
T ss_pred             HHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcc
Confidence            9999999999999999999999999999999999999999999999999999999987653

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.20  E-value=8.1e-10  Score=104.40  Aligned_cols=141  Identities=13%  Similarity=0.205  Sum_probs=113.0

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHH
Q 017782          219 LWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIF  298 (366)
Q Consensus       219 ~~~~G~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~  298 (366)
                      ...+|.+++++++++|+...+..|.. .+.++....+++.+++.+++.++.....+..... ....+...+... ..+.+
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~   81 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLK-TLIQTPQKIFML-AVSAV   81 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHH-HHHcCHHHHHHH-HHHHH
Confidence            44579999999999999999999876 5799999999999999887766654432210000 000133444333 35667


Q ss_pred             HHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcc
Q 017782          299 GSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF  362 (366)
Q Consensus       299 ~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~  362 (366)
                      +.++.+.++++++++.+++.++.+.++.|++.+++++++++|+++..+++|.++.+.|++++..
T Consensus        82 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~  145 (296)
T PRK15430         82 LIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLW  145 (296)
T ss_pred             HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH
Confidence            7788999999999999999999999999999999999999999999999999999999998753

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.19  E-value=1e-08  Score=97.17  Aligned_cols=232  Identities=16%  Similarity=0.112  Sum_probs=165.4

Q ss_pred             HHHHHHHhhc--Cc--CHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 017782          131 AMVAMKEVLP--KA--GTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGL  206 (366)
Q Consensus       131 ~~~~~k~~~~--~~--~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~al~~~~~~~  206 (366)
                      +.++.+.+..  ..  .|..+.+..+....++..+.....+ ..+.++..+...+..+++. .+...+-+.++++++...
T Consensus        15 ~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~al~~i~~p~   92 (303)
T PF08449_consen   15 YGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK-FPKSRKIPLKKYAILSFLF-FLASVLSNAALKYISYPT   92 (303)
T ss_pred             HHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc-ccCCCcChHHHHHHHHHHH-HHHHHHHHHHHHhCChHH
Confidence            3444444443  23  3889999999988887777665554 2222335566666777665 445558899999988766


Q ss_pred             ccc-------c-------------------------------ccc-----CC---CCccchHHHHHHHHHHHHHHHHHHH
Q 017782          207 GSA-------P-------------------------------AFD-----ES---NSSLWGSGEWWMLLAAQSMAVGTVM  240 (366)
Q Consensus       207 a~~-------P-------------------------------~~~-----~~---~~~~~~~G~l~allaa~~~a~~~v~  240 (366)
                      -.+       |                               ...     ..   .......|+.+.+++.++.+...+.
T Consensus        93 ~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~  172 (303)
T PF08449_consen   93 QIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVY  172 (303)
T ss_pred             HHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHH
Confidence            555       1                               000     01   1111234999999999999999999


Q ss_pred             HHHhhc--CCChHHHHHHHHHHHHHHHHHHHHH--hcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCh
Q 017782          241 VRWVSK--YSDPVMATGWHMVIGGLPLMVISVL--NHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSL  316 (366)
Q Consensus       241 ~r~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al~~~~a  316 (366)
                      .+++.+  +.++...+++..+.+.+...+....  .++..-........+..+..++... ++..+++.+.++..++.++
T Consensus       173 qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s-~~~~~g~~~i~~~~~~~~a  251 (303)
T PF08449_consen  173 QEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFS-LTGALGQFFIFYLIKKFSA  251 (303)
T ss_pred             HHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCc
Confidence            998754  3467888899999988888777666  3222111111122334455555555 5567788888899999999


Q ss_pred             hhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccCC
Q 017782          317 TKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS  365 (366)
Q Consensus       317 ~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~~  365 (366)
                      ...+++..+.-+++++++++++|+++++.+|+|.++++.|+.+....|+
T Consensus       252 l~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~  300 (303)
T PF08449_consen  252 LTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKK  300 (303)
T ss_pred             hhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhc
Confidence            9999999999999999999999999999999999999999999887664

; GO: 0055085 transmembrane transport

>TIGR00688 rarD rarD protein

Probab=99.16  E-value=9.9e-10  Score=101.50  Aligned_cols=139  Identities=17%  Similarity=0.201  Sum_probs=109.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcc-cccccCCHH-HHHHHHHHHHHH
Q 017782          222 SGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYG-ESVKELTSS-DILALLYTSIFG  299 (366)
Q Consensus       222 ~G~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~ll~~gv~~  299 (366)
                      +|.++.++++++|+...+..|.. .+.++.++.+++++++.+.+.++.....+.... ......+.. .+..+...|++ 
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~-~~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLL-KPLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL-   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHh-ccCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH-
Confidence            48899999999999999999985 569999999999999988876665443321000 000111222 23445555644 


Q ss_pred             HHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcc
Q 017782          300 SAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF  362 (366)
Q Consensus       300 ~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~  362 (366)
                      .++.+.++++++++.+++.++.+.++.|++++++++++++|+++..+++|..+.+.|+.++..
T Consensus        80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~  142 (256)
T TIGR00688        80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIV  142 (256)
T ss_pred             HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence            667999999999999999999999999999999999999999999999999999999987643

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.98  E-value=2.2e-08  Score=96.88  Aligned_cols=136  Identities=16%  Similarity=0.178  Sum_probs=112.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHH-hhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHH
Q 017782          223 GEWWMLLAAQSMAVGTVMVRW-VSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSA  301 (366)
Q Consensus       223 G~l~allaa~~~a~~~v~~r~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~  301 (366)
                      -...+++.-++|+.+.++.|. +...+++....++++.+++++++++....+...   .....+..+|..+...|+++ .
T Consensus        14 ~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~---~~~~~~~~~~~~l~l~g~~g-~   89 (358)
T PLN00411         14 FLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSR---SLPPLSVSILSKIGLLGFLG-S   89 (358)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhc---ccCcchHHHHHHHHHHHHHH-H
Confidence            355667777889999999987 556789999999999999999888876543211   01233466777888888777 5


Q ss_pred             HHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHH------hCCCCChhHHHHHHHHHHHHHHhcc
Q 017782          302 ISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLY------LGETFSPLQLVGAAVTVVAIYLVNF  362 (366)
Q Consensus       302 l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~------lgE~~~~~~~vG~~lIl~g~~l~~~  362 (366)
                      +.+.+++.++++.+++.++++.++.|++++++++++      ++|+++..+++|.++-++|+.++..
T Consensus        90 ~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~  156 (358)
T PLN00411         90 MYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIF  156 (358)
T ss_pred             HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHH
Confidence            677789999999999999999999999999999999      6999999999999999999988664

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.97  E-value=2.5e-08  Score=84.49  Aligned_cols=139  Identities=18%  Similarity=0.289  Sum_probs=113.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhc-------CCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccC-------CHHH
Q 017782          223 GEWWMLLAAQSMAVGTVMVRWVSK-------YSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKEL-------TSSD  288 (366)
Q Consensus       223 G~l~allaa~~~a~~~v~~r~~~~-------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-------~~~~  288 (366)
                      |.++++++.++.+++.++.|++.+       +.++.....+....+.+.+.+..+..+.+.........       +...
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            678999999999999999988533       56889999999999999999988887766532221111       2344


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcc
Q 017782          289 ILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF  362 (366)
Q Consensus       289 ~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~  362 (366)
                      +..++..|++ ..+-....+..+++.+|...++...+.-+...+++++++||+++..+++|.++.+.|.+++++
T Consensus        81 ~~~~~~~~~~-~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLL-AFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            5555655644 455788888999999999999999999999999999999999999999999999999988753

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.96  E-value=4.8e-08  Score=92.11  Aligned_cols=132  Identities=18%  Similarity=0.202  Sum_probs=110.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHH
Q 017782          224 EWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAIS  303 (366)
Q Consensus       224 ~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~  303 (366)
                      .+..++..+.|+...+..|....+.+|...+++++++++++++++.......       ..+.++|......|++...+.
T Consensus        10 ~~~~~~~~~iWg~~~~~~K~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~   82 (292)
T PRK11272         10 FGALFALYIIWGSTYLVIRIGVESWPPLMMAGVRFLIAGILLLAFLLLRGHP-------LPTLRQWLNAALIGLLLLAVG   82 (292)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHhCCC-------CCcHHHHHHHHHHHHHHHHHH
Confidence            3456778899999999999877789999999999999998887776543221       124556777777887776778


Q ss_pred             HHHHHHHh-ccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhccc
Q 017782          304 YGVYFYSA-TKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFR  363 (366)
Q Consensus       304 ~~l~~~al-~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~  363 (366)
                      +.+++.+. ++.+++.++++.++.|+++.+++++ ++|+++..+++|..+.+.|++++...
T Consensus        83 ~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~  142 (292)
T PRK11272         83 NGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSG  142 (292)
T ss_pred             HHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcC
Confidence            88899998 9999999999999999999999986 79999999999999999999988643

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.90  E-value=5.8e-08  Score=79.97  Aligned_cols=121  Identities=17%  Similarity=0.267  Sum_probs=92.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHH
Q 017782          223 GEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAI  302 (366)
Q Consensus       223 G~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l  302 (366)
                      |.++.+++.++-+...++.|+-.++.+....... .    .. .....             .++   ...++.|++++++
T Consensus         3 ~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~-~----~~-~~~~~-------------~~p---~~~i~lgl~~~~l   60 (129)
T PRK02971          3 GYLWGLASVLLASVAQLSLKWGMSRLPLLSHAWD-F----IA-ALLAF-------------GLA---LRAVLLGLAGYAL   60 (129)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhhCCCccchhH-H----HH-HHHHH-------------hcc---HHHHHHHHHHHHH
Confidence            6788888888889999999886555433221111 0    00 00000             011   2245778899999


Q ss_pred             HHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHH--HhCCCCChhHHHHHHHHHHHHHHhcccCC
Q 017782          303 SYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFL--YLGETFSPLQLVGAAVTVVAIYLVNFRGS  365 (366)
Q Consensus       303 ~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l--~lgE~~~~~~~vG~~lIl~g~~l~~~~~~  365 (366)
                      ++.+|++++++.+.+.+.++..+.+++..+.++.  ++||++++.+++|.++|++|++++.++++
T Consensus        61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~  125 (129)
T PRK02971         61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT  125 (129)
T ss_pred             HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence            9999999999999999999999999888888885  89999999999999999999999987654

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.85  E-value=1.1e-07  Score=90.08  Aligned_cols=127  Identities=17%  Similarity=0.221  Sum_probs=100.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHH
Q 017782          224 EWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAIS  303 (366)
Q Consensus       224 ~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~  303 (366)
                      .+++++++++|+...+..|...++.+|....++++.++++...++..   .+       ...   +..++..|++.....
T Consensus         6 ~l~~l~~~~~Wg~~~~~~k~~~~~~~p~~~~~~R~~~a~~~l~~~~~---~~-------~~~---~~~~~~~g~~~~~~~   72 (299)
T PRK11453          6 GVLALLVVVVWGLNFVVIKVGLHNMPPLMLAGLRFMLVAFPAIFFVA---RP-------KVP---LNLLLGYGLTISFGQ   72 (299)
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc---CC-------CCc---hHHHHHHHHHHHHHH
Confidence            46788999999999999998778899999999999988766544321   11       111   223333454444445


Q ss_pred             HHHHHHHhcc-CChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhccc
Q 017782          304 YGVYFYSATK-GSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFR  363 (366)
Q Consensus       304 ~~l~~~al~~-~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~  363 (366)
                      +.+++.++++ .+++.++.+.++.|+++.++++++++|+++..+++|.++.++|++++...
T Consensus        73 ~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~  133 (299)
T PRK11453         73 FAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIED  133 (299)
T ss_pred             HHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccc
Confidence            5677788887 68899999999999999999999999999999999999999999988754

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.85  E-value=2.8e-08  Score=80.14  Aligned_cols=106  Identities=17%  Similarity=0.445  Sum_probs=81.1

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHH
Q 017782          256 WHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGF  335 (366)
Q Consensus       256 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~  335 (366)
                      ++.+...+....+....++..  ........+.+...+..|+++..+++.++++|+++.++ .++++..+.|+++.++++
T Consensus         3 ~r~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~   79 (113)
T PF13536_consen    3 FRYLFSVLFLLIILLIRGRLR--DLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSW   79 (113)
T ss_pred             HHHHHHHHHHHHHHHHHccHH--HHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHH
Confidence            455666666665555433221  01122223455566666777776899999999999994 888999999999999999


Q ss_pred             HHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782          336 LYLGETFSPLQLVGAAVTVVAIYLVNFRG  364 (366)
Q Consensus       336 l~lgE~~~~~~~vG~~lIl~g~~l~~~~~  364 (366)
                      ++++|+++..+++|.+++++|+.++...+
T Consensus        80 ~~~~er~~~~~~~a~~l~~~Gv~li~~~~  108 (113)
T PF13536_consen   80 LFFKERLSPRRWLAILLILIGVILIAWSD  108 (113)
T ss_pred             HHhcCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence            99999999999999999999999988764

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.82  E-value=8.5e-08  Score=88.49  Aligned_cols=119  Identities=16%  Similarity=0.176  Sum_probs=97.7

Q ss_pred             HHHHHHHHHHhh-cCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 017782          234 MAVGTVMVRWVS-KYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSAT  312 (366)
Q Consensus       234 ~a~~~v~~r~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al~  312 (366)
                      |+...+..|... ...|+.....++.+.+.+.+.+.....           .+..++...+..|.++..+.+.+++++++
T Consensus         1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~   69 (260)
T TIGR00950         1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR-----------PPLKRLLRLLLLGALQIGVFYVLYFVAVK   69 (260)
T ss_pred             CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc-----------cCHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            345566777754 457888888888888877776654321           23456666777787888889999999999


Q ss_pred             cCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhccc
Q 017782          313 KGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFR  363 (366)
Q Consensus       313 ~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~  363 (366)
                      +.+++.++++..++|++++++++++++|++++.+++|..+.+.|+.++...
T Consensus        70 ~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~  120 (260)
T TIGR00950        70 RLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSD  120 (260)
T ss_pred             hcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccC
Confidence            999999999999999999999999999999999999999999999887643

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.79  E-value=1.6e-07  Score=88.65  Aligned_cols=131  Identities=18%  Similarity=0.133  Sum_probs=100.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHH
Q 017782          222 SGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSA  301 (366)
Q Consensus       222 ~G~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~  301 (366)
                      ++.++++++.++|+...+..|...+..+|....++++.++++++.++.   ..+..    ..   ..+..++ .+.+...
T Consensus         4 ~~~l~~l~a~~~Wg~~~~~~k~~~~~~~P~~~~~~R~~~a~l~l~~~~---~~~~~----~~---~~~~~~~-~~~l~~~   72 (295)
T PRK11689          4 KATLIGLIAILLWSTMVGLIRGVSESLGPVGGAAMIYSVSGLLLLLTV---GFPRL----RQ---FPKRYLL-AGGLLFV   72 (295)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHc---ccccc----cc---ccHHHHH-HHhHHHH
Confidence            367889999999999999999988899999999999999988876542   11110    11   1122222 2334444


Q ss_pred             HHHHHHHHHh----ccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhccc
Q 017782          302 ISYGVYFYSA----TKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFR  363 (366)
Q Consensus       302 l~~~l~~~al----~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~  363 (366)
                      +.+.+++.++    +..++..++.+.++.|++++++++++++|+++..+++|..+.+.|++++...
T Consensus        73 ~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~  138 (295)
T PRK11689         73 SYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGG  138 (295)
T ss_pred             HHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecC
Confidence            4555555555    4568889999999999999999999999999999999999999999887654

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.72  E-value=2.5e-07  Score=74.35  Aligned_cols=68  Identities=10%  Similarity=0.128  Sum_probs=63.4

Q ss_pred             HHHHHHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcc
Q 017782          295 TSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF  362 (366)
Q Consensus       295 ~gv~~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~  362 (366)
                      .++++.++++.++.+++++.+.+++.++.++.++++.+++++++||++++.+++|.++|++|+.++..
T Consensus        42 ~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~  109 (111)
T PRK15051         42 LALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS  109 (111)
T ss_pred             HHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            34467788999999999999999999999999999999999999999999999999999999988764

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=98.68  E-value=4.3e-07  Score=85.56  Aligned_cols=234  Identities=11%  Similarity=0.056  Sum_probs=167.6

Q ss_pred             hhHHHHHHHhhc--Cc-CHHHHHHHHHHHHHHHHHHHHHHhCCCCCC--ChhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 017782          129 GTAMVAMKEVLP--KA-GTFFVAAFRLIPAGLLLITFASSQGRKLPS--GFNAWVSIFLFALVDASCFQGFLAQGLQRTS  203 (366)
Q Consensus       129 g~~~~~~k~~~~--~~-~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~--~~~~~~~~~~~g~l~~~~~~~~~~~al~~~~  203 (366)
                      .......|+.++  +. -|..+..+.+..+.+.+......+..+.+.  .+..+...+-+|++. +....+-..++.+.+
T Consensus        30 v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~-~~~~v~~n~Sl~~v~  108 (316)
T KOG1441|consen   30 VGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVF-CISHVLGNVSLSYVP  108 (316)
T ss_pred             eeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHH-HHHHHhcchhhhccc
Confidence            344456787777  43 388888888877777776665555443332  335677777777765 445557788888888


Q ss_pred             cccccc-----c-------------------------cc------cCCCCccchHHHHHHHHHHHHHHHHHHHHHHhhc-
Q 017782          204 AGLGSA-----P-------------------------AF------DESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSK-  246 (366)
Q Consensus       204 ~~~a~~-----P-------------------------~~------~~~~~~~~~~G~l~allaa~~~a~~~v~~r~~~~-  246 (366)
                      ++....     |                         ..      ...+.+....|.+.++.+.+..++..++.|++.+ 
T Consensus       109 VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~  188 (316)
T KOG1441|consen  109 VSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMISNLAFALRNILSKKLLTS  188 (316)
T ss_pred             hhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence            887766     2                         11      1233445667999999999999999999998653 


Q ss_pred             ---CCChHHHHHHHHHHHHHHHH-HHHHHhcCCCccc-ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHH
Q 017782          247 ---YSDPVMATGWHMVIGGLPLM-VISVLNHDPVYGE-SVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSS  321 (366)
Q Consensus       247 ---~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~s~  321 (366)
                         +.|+...+.+..-.+.+.++ |+....++..... .....+...+ .+++.. ++...-+..-+..+.+.+|..-++
T Consensus       189 ~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s-v~~f~~Nls~f~~ig~tSalT~~V  266 (316)
T KOG1441|consen  189 KGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFL-ILLLNS-VLAFLLNLSAFLVIGRTSALTYSV  266 (316)
T ss_pred             cccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhH-HHHHHH-HHHHHHHHHHHHHHcccCchhhhh
Confidence               47889999998888888888 7665544443200 0012222222 233333 444545667778899999999999


Q ss_pred             hhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccCC
Q 017782          322 LTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS  365 (366)
Q Consensus       322 ~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~~  365 (366)
                      ...+--++.++.+++++++++++.+..|.++.++|++++.+.|.
T Consensus       267 ~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~  310 (316)
T KOG1441|consen  267 AGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKL  310 (316)
T ss_pred             hccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhh
Confidence            99999999999999999999999999999999999999987653

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.62  E-value=1.4e-06  Score=82.52  Aligned_cols=119  Identities=16%  Similarity=0.181  Sum_probs=95.6

Q ss_pred             HHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCh
Q 017782          238 TVMVRWVSKY-SDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSL  316 (366)
Q Consensus       238 ~v~~r~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al~~~~a  316 (366)
                      ++++|...+. ..|...+++++.++.+...+.. ..+...    ....+.++|..++..|++. .+.+.+.++++++.++
T Consensus        18 ~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~l~~~s~   91 (302)
T TIGR00817        18 NIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSW-SSGLPK----RLKISSALLKLLLPVAIVH-TIGHVTSNVSLSKVAV   91 (302)
T ss_pred             HHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHH-HhCCCC----CCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHhccH
Confidence            3567777666 5688888999888877655441 111111    1345677888888889774 7789999999999999


Q ss_pred             hhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcc
Q 017782          317 TKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF  362 (366)
Q Consensus       317 ~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~  362 (366)
                      +..+++..+.|++++++++++++|+++..+++|.+++++|+.+...
T Consensus        92 s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~  137 (302)
T TIGR00817        92 SFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASD  137 (302)
T ss_pred             HHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcC
Confidence            9999999999999999999999999999999999999999987643

specificities overlap.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.61  E-value=9.5e-07  Score=80.89  Aligned_cols=140  Identities=14%  Similarity=0.192  Sum_probs=116.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHH
Q 017782          221 GSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGS  300 (366)
Q Consensus       221 ~~G~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~  300 (366)
                      ..|.++++.+-+.|+.--...|-+ +..++..+..++.+.+......+.....+...... ..-+++.+......++.. 
T Consensus         6 ~~Gil~~l~Ay~lwG~lp~y~kll-~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~-~~~~p~~~~~~~l~a~li-   82 (293)
T COG2962           6 RKGILLALLAYLLWGLLPLYFKLL-EPLPATEILAHRVIWSFPFMLALLFLLRQWRELKQ-LLKQPKTLLMLALTALLI-   82 (293)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHH-ccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH-HHhCcHHHHHHHHHHHHH-
Confidence            459999999999999999999887 57899999999999999888877666544422111 123456677777677554 


Q ss_pred             HHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhccc
Q 017782          301 AISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFR  363 (366)
Q Consensus       301 ~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~  363 (366)
                      ...+.+|.+|.+.....++|.-.++.|.+.+++|.++++|+++..|++..++..+|+....+.
T Consensus        83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~  145 (293)
T COG2962          83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWL  145 (293)
T ss_pred             HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence            448999999999999999999999999999999999999999999999999999999876653

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.57  E-value=3.4e-06  Score=81.61  Aligned_cols=122  Identities=11%  Similarity=0.062  Sum_probs=96.3

Q ss_pred             HHHHHHHHHhhcCCC-hHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccC--CHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017782          235 AVGTVMVRWVSKYSD-PVMATGWHMVIGGLPLMVISVLNHDPVYGESVKEL--TSSDILALLYTSIFGSAISYGVYFYSA  311 (366)
Q Consensus       235 a~~~v~~r~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll~~gv~~~~l~~~l~~~al  311 (366)
                      ..+.+..|.+.+..+ |...+.++++++.+.+.+... .+....    ...  ....|..++.+|++... .+...+.++
T Consensus        62 ~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~-~~~~~~----~~~~~~~~~~~~llp~gl~~~~-~~~~~~~sl  135 (350)
T PTZ00343         62 VLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWA-TGFRKI----PRIKSLKLFLKNFLPQGLCHLF-VHFGAVISM  135 (350)
T ss_pred             HHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHH-hCCCCC----CCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence            444566788878889 999999999999876554432 211110    111  23467777778866654 577788999


Q ss_pred             ccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcc
Q 017782          312 TKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF  362 (366)
Q Consensus       312 ~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~  362 (366)
                      ++.+++.++++..++|++++++++++++|+++..+++|.+++++|+.+...
T Consensus       136 ~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~  186 (350)
T PTZ00343        136 GLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASV  186 (350)
T ss_pred             hhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheec
Confidence            999999999999999999999999999999999999999999999998764

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.47  E-value=8.1e-06  Score=75.91  Aligned_cols=139  Identities=21%  Similarity=0.315  Sum_probs=104.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHH
Q 017782          221 GSGEWWMLLAAQSMAVGTVMVRWVSKY-SDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFG  299 (366)
Q Consensus       221 ~~G~l~allaa~~~a~~~v~~r~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~  299 (366)
                      ..+....++.++.|+......|..... .+.......+...+.+...+.........      ......+...+..+.+.
T Consensus         6 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~   79 (292)
T COG0697           6 LLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGL------RPALRPWLLLLLLALLG   79 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcccc------cccccchHHHHHHHHHH
Confidence            357788888889999999999887665 55555666677777766332322211001      11111144455566678


Q ss_pred             HHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHH-HHhCCCCChhHHHHHHHHHHHHHHhcccCC
Q 017782          300 SAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGF-LYLGETFSPLQLVGAAVTVVAIYLVNFRGS  365 (366)
Q Consensus       300 ~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~-l~lgE~~~~~~~vG~~lIl~g~~l~~~~~~  365 (366)
                      ....+.+++.++++.+++.++.+.++.|++..++++ ++++|+++..++.|..+.+.|++++..++.
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~  146 (292)
T COG0697          80 LALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGG  146 (292)
T ss_pred             HHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCC
Confidence            888999999999999999999999999999999997 777999999999999999999999887653

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=98.47  E-value=2e-07  Score=83.29  Aligned_cols=224  Identities=17%  Similarity=0.146  Sum_probs=164.4

Q ss_pred             hhHHHHHHHhhcCc-CHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccccc
Q 017782          129 GTAMVAMKEVLPKA-GTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLG  207 (366)
Q Consensus       129 g~~~~~~k~~~~~~-~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~al~~~~~~~a  207 (366)
                      ++...-...+-.++ -|....|..+..-+++..|++.+|++-.   +..|+..++++++..-..+ +...|.|||+...+
T Consensus        32 ~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~~~---~~~~~hYilla~~DVEaNy-~vV~AyQyTsmtSi  107 (336)
T KOG2766|consen   32 STAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRRKYI---KAKWRHYILLAFVDVEANY-FVVKAYQYTSMTSI  107 (336)
T ss_pred             cchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhhHHH---HHHHHHhhheeEEeecccE-EEeeehhhcchHHH
Confidence            33333333333334 3788899999999999999998877332   3566677888877765544 56778888887777


Q ss_pred             cc------c--------------------------------------cccCCCCccchHHHHHHHHHHHHHHHHHHHHHH
Q 017782          208 SA------P--------------------------------------AFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRW  243 (366)
Q Consensus       208 ~~------P--------------------------------------~~~~~~~~~~~~G~l~allaa~~~a~~~v~~r~  243 (366)
                      .+      |                                      ..+..+++...+||.+.+++|-+||+.++.-..
T Consensus       108 ~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSNv~EEf  187 (336)
T KOG2766|consen  108 MLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNVSEEF  187 (336)
T ss_pred             HHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeeeccccHHH
Confidence            66      2                                      223345667778999999999999999999999


Q ss_pred             hhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHH-HHHHHHHHHHHHHHHhccCChhhHHHh
Q 017782          244 VSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYT-SIFGSAISYGVYFYSATKGSLTKLSSL  322 (366)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~-gv~~~~l~~~l~~~al~~~~a~~~s~~  322 (366)
                      +.|+.|....+....++|+++..+- ++.+....    ....+. |....++ ..++.++-|.+.-.-+|.-+++...+-
T Consensus       188 lvkn~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~----~tl~w~-~~i~~yl~f~L~MFllYsl~pil~k~~~aT~~nls  261 (336)
T KOG2766|consen  188 LVKNADRVELMGFLGLFGAIISAIQ-FIFERHHV----STLHWD-SAIFLYLRFALTMFLLYSLAPILIKTNSATMFNLS  261 (336)
T ss_pred             HHhcCcHHHHHHHHHHHHHHHHHHH-Hhhhccce----eeEeeh-HHHHHHHHHHHHHHHHHHhhHHheecCCceEEEhh
Confidence            9999999999999999999999888 44433321    122221 2222222 335556667777778899999999998


Q ss_pred             hhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782          323 TFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG  364 (366)
Q Consensus       323 ~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~  364 (366)
                      ..+.-.|+.++  ..||-+.+|..++..+.+..|.+++.-++
T Consensus       262 lLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~re  301 (336)
T KOG2766|consen  262 LLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTRE  301 (336)
T ss_pred             HhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeeccc
Confidence            89999999988  66788899999999999999998876543

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.42  E-value=5.3e-06  Score=78.19  Aligned_cols=132  Identities=16%  Similarity=0.095  Sum_probs=99.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHH
Q 017782          223 GEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAI  302 (366)
Q Consensus       223 G~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l  302 (366)
                      |.+++++++++|+...+..|+.. ..++.+..  .+.++.++...+......+.      ......+..-+..| +.-.+
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~-g~~~~~~~--~~~~g~l~~~~~~~~~~~~~------~~~~~~~~~g~l~G-~~w~i   71 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG-GGPYSQTL--GTTFGALILSIAIAIFVLPE------FWALSIFLVGLLSG-AFWAL   71 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC-CCHHHHHH--HHHHHHHHHHHHHHHHhCCc------ccccHHHHHHHHHH-HHHHh
Confidence            57899999999999999999975 55555554  35555555554444333221      11233333333334 33677


Q ss_pred             HHHHHHHHhccCChhhHHHhhh-hHHHHHHHHHHHHhCCCCChhH----HHHHHHHHHHHHHhcccC
Q 017782          303 SYGVYFYSATKGSLTKLSSLTF-LTPMFASIFGFLYLGETFSPLQ----LVGAAVTVVAIYLVNFRG  364 (366)
Q Consensus       303 ~~~l~~~al~~~~a~~~s~~~~-l~Pv~a~i~~~l~lgE~~~~~~----~vG~~lIl~g~~l~~~~~  364 (366)
                      ++.+|..++|+.+.+.+-++.+ +++++..+++.+++||+.+..+    ++|.++++.|++++...+
T Consensus        72 g~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~  138 (290)
T TIGR00776        72 GQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSK  138 (290)
T ss_pred             hhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecc
Confidence            8999999999999999999999 8999999999999999999999    999999999999876543

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.33  E-value=5.7e-06  Score=66.58  Aligned_cols=92  Identities=16%  Similarity=0.143  Sum_probs=79.0

Q ss_pred             HHHHHHHHHHHHhhHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCC---ChhHHHHHHHHHHHHHHHHHH
Q 017782          117 EWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPS---GFNAWVSIFLFALVDASCFQG  193 (366)
Q Consensus       117 g~l~llla~~~~g~~~~~~k~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~---~~~~~~~~~~~g~l~~~~~~~  193 (366)
                      ..++.+++++++|...++.|...+++||....+.|.++..+.+..++...++....   ++|.|..+.+.|+. .+....
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla-~glswl   82 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLA-GGLSWL   82 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHH-HHHHHH
Confidence            46789999999999999999999999999999999999999998888887765544   67888888888865 567777


Q ss_pred             HHHHHhhccccccccc
Q 017782          194 FLAQGLQRTSAGLGSA  209 (366)
Q Consensus       194 ~~~~al~~~~~~~a~~  209 (366)
                      +||.|++...++.++.
T Consensus        83 ~Yf~ALk~G~as~VvP   98 (140)
T COG2510          83 LYFRALKKGKASRVVP   98 (140)
T ss_pred             HHHHHHhcCCcceEEE
Confidence            9999999988876654

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.31  E-value=0.00021  Score=65.85  Aligned_cols=174  Identities=14%  Similarity=0.111  Sum_probs=122.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhccccccccc---------------------c----------------------
Q 017782          174 FNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSA---------------------P----------------------  210 (366)
Q Consensus       174 ~~~~~~~~~~g~l~~~~~~~~~~~al~~~~~~~a~~---------------------P----------------------  210 (366)
                      .+.+...++.|++. ...+..++.+.++..++.+..                     +                      
T Consensus        42 ~~~~~~~~lsG~~W-~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lt  120 (269)
T PF06800_consen   42 GTSFIVAFLSGAFW-AIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILT  120 (269)
T ss_pred             HHHHHHHHHHHHHH-HHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHh
Confidence            36677777777776 455668898998888877655                     0                      


Q ss_pred             cccC------CCCccchHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccC
Q 017782          211 AFDE------SNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKEL  284 (366)
Q Consensus       211 ~~~~------~~~~~~~~G~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~  284 (366)
                      ...+      ++.....+|.+..+.+.+.|-.|.+..|..  +.|+.....-+.+.-.+...++.......       ..
T Consensus       121 s~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~--~~~~~~~~lPqaiGm~i~a~i~~~~~~~~-------~~  191 (269)
T PF06800_consen  121 SYQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAF--HVSGWSAFLPQAIGMLIGAFIFNLFSKKP-------FF  191 (269)
T ss_pred             ccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhc--CCChhHhHHHHHHHHHHHHHHHhhccccc-------cc
Confidence            0111      112345679999999999999999998874  56777766655544444444444333222       11


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChh----HHHHHHHHHHHHHH
Q 017782          285 TSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPL----QLVGAAVTVVAIYL  359 (366)
Q Consensus       285 ~~~~~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~----~~vG~~lIl~g~~l  359 (366)
                      +...|..+ ..| +.-.++..++..+.+..+.+..=.+.-+.++++.+.|.+++||+=+..    .++|.++|+.|.++
T Consensus       192 ~k~~~~ni-l~G-~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  192 EKKSWKNI-LTG-LIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             ccchHHhh-HHH-HHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence            22234333 345 445678999999999999999999999999999999999999997754    56788888887764

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.27  E-value=6.8e-05  Score=69.09  Aligned_cols=216  Identities=12%  Similarity=0.044  Sum_probs=156.6

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccccccc-------c-----
Q 017782          143 GTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSA-------P-----  210 (366)
Q Consensus       143 ~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~al~~~~~~~a~~-------P-----  210 (366)
                      ++..+.+..-+.+.++-..++..+.+. ...++.|......++.+..... |.|.|++|.+=-...+       |     
T Consensus        50 ~~~fL~~~q~l~~~~~s~~~l~~~k~~-~~~~apl~~y~~is~tn~~s~~-~~yeaLKyvSyPtq~LaKscKmIPVmlmg  127 (327)
T KOG1581|consen   50 HSLFLVFCQRLVALLVSYAMLKWWKKE-LSGVAPLYKYSLISFTNTLSSW-CGYEALKYVSYPTQTLAKSCKMIPVMLMG  127 (327)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhccccc-CCCCCchhHHhHHHHHhhcchH-HHHHHHHhccchHHHHHHHhhhhHHHHHH
Confidence            477788888888877775555444333 3445677777788887655555 8999999988544444       2     


Q ss_pred             --------------------------ccc-------CCCCccchHHHHHHHHHHHHHHHHHHHHHHhhc--CCChHHHHH
Q 017782          211 --------------------------AFD-------ESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSK--YSDPVMATG  255 (366)
Q Consensus       211 --------------------------~~~-------~~~~~~~~~G~l~allaa~~~a~~~v~~r~~~~--~~~~~~~~~  255 (366)
                                                .+.       ..+.....+|..+....-++=+.......++-+  ++++..+++
T Consensus       128 ~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~  207 (327)
T KOG1581|consen  128 TLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMF  207 (327)
T ss_pred             HHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHH
Confidence                                      011       111123456888888888888888888777654  356788888


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHH
Q 017782          256 WHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGF  335 (366)
Q Consensus       256 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~  335 (366)
                      +.-+++.+.........+...-.-.....+++.+.-++... ++..++|.+.++-+++.++-+.+.++.+.=+++++++.
T Consensus       208 ~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s-~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~  286 (327)
T KOG1581|consen  208 GVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYS-TCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSC  286 (327)
T ss_pred             HHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHH-HhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHH
Confidence            88888888777663332222111122344566677777777 44566999999999999999999999999999999999


Q ss_pred             HHhCCCCChhHHHHHHHHHHHHHHhc
Q 017782          336 LYLGETFSPLQLVGAAVTVVAIYLVN  361 (366)
Q Consensus       336 l~lgE~~~~~~~vG~~lIl~g~~l~~  361 (366)
                      +.+|.++++.|++|..+|++|+.+-.
T Consensus       287 i~f~h~~s~~q~~g~~iVFg~i~l~~  312 (327)
T KOG1581|consen  287 IVFGHPLSSEQWLGVLIVFGGIFLEI  312 (327)
T ss_pred             HHhCCccchhhccCeeeehHHHHHHH
Confidence            99999999999999999999998754

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.23  E-value=4.8e-05  Score=71.72  Aligned_cols=126  Identities=16%  Similarity=0.198  Sum_probs=99.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHH
Q 017782          221 GSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGS  300 (366)
Q Consensus       221 ~~G~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~  300 (366)
                      ..|..+.+++.++|+......|...++.++....++++++++++++++.....        ...+.++|...+..|++ .
T Consensus        11 ~~~~~~~~la~~~~~~~~~~~K~~~~~~~~~~~~~~R~~~a~l~l~~~~~~~~--------~~~~~~~~~~~~~~g~~-~   81 (293)
T PRK10532         11 WLPILLLLIAMASIQSGASLAKSLFPLVGAPGVTALRLALGTLILIAIFKPWR--------LRFAKEQRLPLLFYGVS-L   81 (293)
T ss_pred             chHHHHHHHHHHHHHhhHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhHHh--------ccCCHHHHHHHHHHHHH-H
Confidence            45899999999999999999999888899999999999999988776542211        12345666666667754 5


Q ss_pred             HHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhc
Q 017782          301 AISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN  361 (366)
Q Consensus       301 ~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~  361 (366)
                      ++.+.++++++++.+++.++.+.++.|+++++++    +|++..  ..+.++.+.|++++.
T Consensus        82 ~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~--~~~~~i~~~Gv~li~  136 (293)
T PRK10532         82 GGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVD--FVWVVLAVLGLWFLL  136 (293)
T ss_pred             HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHH--HHHHHHHHHHHheee
Confidence            6678889999999999999999999999999887    366654  455667788887764

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=98.21  E-value=0.00092  Score=61.34  Aligned_cols=223  Identities=14%  Similarity=0.077  Sum_probs=136.8

Q ss_pred             hHHHHHHHHHHHHHHhhHHHHHHHhhcCcCHHHHHHHHH---HHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHH
Q 017782          114 MLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRL---IPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASC  190 (366)
Q Consensus       114 ~~~g~l~llla~~~~g~~~~~~k~~~~~~~p~~~~~~R~---~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~  190 (366)
                      ..+..+.+.+.++++.....+.-..+..+||...-..|-   ++.+++...++   +|+  ..+.+|..+++..+ +.. 
T Consensus        13 ~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L---~r~--ls~~qW~aL~lL~~-Gv~-   85 (244)
T PF04142_consen   13 SPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLL---KRR--LSRRQWLALFLLVA-GVV-   85 (244)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHH---Hcc--cchhhHHHHHHHHH-HHh-
Confidence            456678888999999999999999999999887776664   33333333332   222  23356655544322 111 


Q ss_pred             HHHHHHHHhhccccccccc-ccc-cCCCCccchHHHHHHHHHHHHHHHHHHHHHHhhcCCC--hHHHHHHHHHHHHHHHH
Q 017782          191 FQGFLAQGLQRTSAGLGSA-PAF-DESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSD--PVMATGWHMVIGGLPLM  266 (366)
Q Consensus       191 ~~~~~~~al~~~~~~~a~~-P~~-~~~~~~~~~~G~l~allaa~~~a~~~v~~r~~~~~~~--~~~~~~~~~~~~~v~~~  266 (366)
                           ..........+..- ... ..........|.++.++++++-++..+..+|+.|+.+  .........+.+.+..+
T Consensus        86 -----lv~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~  160 (244)
T PF04142_consen   86 -----LVQLSSSQSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNL  160 (244)
T ss_pred             -----eeecCCccccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHH
Confidence                 11111111100000 000 0112334567999999999999999999999876653  33344444555555555


Q ss_pred             HHHHHhcCCCcc--cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCCh
Q 017782          267 VISVLNHDPVYG--ESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSP  344 (366)
Q Consensus       267 ~~~~~~~~~~~~--~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~  344 (366)
                      +.....+.....  +.....+...|..+     +...++=.+....+|+.+...=........+++.+++++++|.+++.
T Consensus       161 ~~~~~~~~~~~~~~g~f~G~~~~~~~~i-----~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~  235 (244)
T PF04142_consen  161 LALLLSDGSAISESGFFHGYSWWVWIVI-----FLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSL  235 (244)
T ss_pred             HHHhcccccccccCCchhhcchHHHHHH-----HHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCch
Confidence            554433221111  11122233333333     33444555667788999999888899999999999999999999999


Q ss_pred             hHHHHHHHH
Q 017782          345 LQLVGAAVT  353 (366)
Q Consensus       345 ~~~vG~~lI  353 (366)
                      ..++|+.+|
T Consensus       236 ~f~lg~~~V  244 (244)
T PF04142_consen  236 SFLLGAALV  244 (244)
T ss_pred             HHhhheecC
Confidence            999998764

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.15  E-value=6.8e-05  Score=66.59  Aligned_cols=144  Identities=12%  Similarity=0.079  Sum_probs=105.8

Q ss_pred             CCCccchHHHHHHHHHHHHHHHHHHHHHHhhcCCC--hHHHHHHHHHHHHHHHHHHHHHhcCCCcc-cccccCCHHHHHH
Q 017782          215 SNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSD--PVMATGWHMVIGGLPLMVISVLNHDPVYG-ESVKELTSSDILA  291 (366)
Q Consensus       215 ~~~~~~~~G~l~allaa~~~a~~~v~~r~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  291 (366)
                      ........|.++.+++-..=++......++++.+.  ....+.+.-+.+.+.+....++.++. |+ .....-.+..|+-
T Consensus       165 ~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGEl-weF~yF~~RhP~~~~~  243 (337)
T KOG1580|consen  165 AEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGEL-WEFFYFVQRHPYVFWD  243 (337)
T ss_pred             CcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhH-HHHHHHHHhccHHHHH
Confidence            34455667999999998888888888877765543  23444555555554444333333221 10 0112224556667


Q ss_pred             HHHHHHHHHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHh
Q 017782          292 LLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLV  360 (366)
Q Consensus       292 ll~~gv~~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~  360 (366)
                      +..++ +++.+++++.+.-+...+|-.-+++..+.-.|+++.++++++.+++..||+|..+|..|...=
T Consensus       244 l~l~a-i~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D  311 (337)
T KOG1580|consen  244 LTLLA-IASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTAD  311 (337)
T ss_pred             HHHHH-HHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhH
Confidence            77777 677899999999999999999999999999999999999999999999999999999998763

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=98.09  E-value=1.1e-05  Score=65.24  Aligned_cols=83  Identities=23%  Similarity=0.341  Sum_probs=68.6

Q ss_pred             HHHhhHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHhCCC--CCCChhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 017782          126 FFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRK--LPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTS  203 (366)
Q Consensus       126 ~~~g~~~~~~k~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~--~~~~~~~~~~~~~~g~l~~~~~~~~~~~al~~~~  203 (366)
                      ++||...++.|...++.||....++|+.++.+ ++++....+++  ...+.+++...+..++++....+.++++++++++
T Consensus         1 ~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~   79 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYIS   79 (126)
T ss_pred             ceeeeHHHHHHHHhccCCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcc
Confidence            47999999999999999999999999999997 55555544432  3455677888888888877888889999999999


Q ss_pred             cccccc
Q 017782          204 AGLGSA  209 (366)
Q Consensus       204 ~~~a~~  209 (366)
                      ++.+++
T Consensus        80 ~~~~~~   85 (126)
T PF00892_consen   80 ASIVSI   85 (126)
T ss_pred             hhHHHH
Confidence            988776

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=97.99  E-value=9.1e-07  Score=79.71  Aligned_cols=137  Identities=18%  Similarity=0.278  Sum_probs=103.4

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHH
Q 017782          219 LWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIF  298 (366)
Q Consensus       219 ~~~~G~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~  298 (366)
                      ..++|.++.-++ .++...+++.+++. ..||......++++-.++..+...+...+.+    .+.+-.-|+  +.=|+.
T Consensus        35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~-e~~p~e~a~~r~l~~mlit~pcliy~~~~v~----gp~g~R~~L--iLRg~m  106 (346)
T KOG4510|consen   35 KPNLGLLLLTVS-YFFNSCMVVSTKVL-ENDPMELASFRLLVRMLITYPCLIYYMQPVI----GPEGKRKWL--ILRGFM  106 (346)
T ss_pred             CCccCceehhhH-HHHhhHHHhhhhhh-ccChhHhhhhhhhhehhhhheEEEEEeeeee----cCCCcEEEE--Eeehhh
Confidence            445688888888 88889999998875 4677777777765555555554444333321    122222332  224544


Q ss_pred             HHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782          299 GSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG  364 (366)
Q Consensus       299 ~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~  364 (366)
                      ++. +..+.+|++++.+.+.+..+.++.|+++++++|++++|+.+....+|..+.+.|++++.++.
T Consensus       107 G~t-gvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPp  171 (346)
T KOG4510|consen  107 GFT-GVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPP  171 (346)
T ss_pred             hhh-HHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCC
Confidence            444 77888999999999999999999999999999999999999999999999999999988764

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.97  E-value=0.0057  Score=58.65  Aligned_cols=247  Identities=13%  Similarity=0.035  Sum_probs=143.3

Q ss_pred             hhHHHHHHHHHHHHHHhhHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHh--CCC-----CCCChhHHHHHHHHHH
Q 017782          113 GMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQ--GRK-----LPSGFNAWVSIFLFAL  185 (366)
Q Consensus       113 ~~~~g~l~llla~~~~g~~~~~~k~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~--~~~-----~~~~~~~~~~~~~~g~  185 (366)
                      +...|++..++++++||+.++-.|. .+.- .++..+.=..+-.-++.|+..-.  -+.     ...+.+.+...++.|+
T Consensus         4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~w-~wE~~W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G~   81 (345)
T PRK13499          4 AIILGIIWHLIGGASSGSFYAPFKK-VKKW-SWETMWSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFGA   81 (345)
T ss_pred             hhHHHHHHHHHHHHHhhcccccccc-cCCC-chhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHHH
Confidence            3467999999999999999999996 4432 22222111111111222211110  011     1124467777788888


Q ss_pred             HHHHHHHHHHHHHhhccccccccc-------------c---------------------------------cc----cC-
Q 017782          186 VDASCFQGFLAQGLQRTSAGLGSA-------------P---------------------------------AF----DE-  214 (366)
Q Consensus       186 l~~~~~~~~~~~al~~~~~~~a~~-------------P---------------------------------~~----~~-  214 (366)
                      +... .+..++.++++...+.+..             |                                 ..    .+ 
T Consensus        82 ~W~i-G~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~~  160 (345)
T PRK13499         82 LWGI-GGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKER  160 (345)
T ss_pred             HHHh-hhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhccc
Confidence            7644 5558899999988777654             1                                 00    11 


Q ss_pred             ------CCCccchHHHHHHHHHHHHHHHHH-------HHHHHh-hcCCChHHHHHHHHH---HHHHHHH-HHHHHh--cC
Q 017782          215 ------SNSSLWGSGEWWMLLAAQSMAVGT-------VMVRWV-SKYSDPVMATGWHMV---IGGLPLM-VISVLN--HD  274 (366)
Q Consensus       215 ------~~~~~~~~G~l~allaa~~~a~~~-------v~~r~~-~~~~~~~~~~~~~~~---~~~v~~~-~~~~~~--~~  274 (366)
                            .+.....+|.++++++.+.++.|.       ...+.- ..+.++.....-+.+   +++++.- ++....  ..
T Consensus       161 ~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~  240 (345)
T PRK13499        161 KMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKN  240 (345)
T ss_pred             ccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence                  122456789999999999999999       443331 123454443333333   4443333 222211  11


Q ss_pred             CCcccc-cccCC----HHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHH---h-hhhHHHHHHHHHHHHhCCCCC--
Q 017782          275 PVYGES-VKELT----SSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSS---L-TFLTPMFASIFGFLYLGETFS--  343 (366)
Q Consensus       275 ~~~~~~-~~~~~----~~~~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~s~---~-~~l~Pv~a~i~~~l~lgE~~~--  343 (366)
                      ..+... ....+    ..+...-+..| +.-.++..+|..+..+.+.+....   + +.+..+++.+.|. +++|+=+  
T Consensus       241 ~~~~~~~~~~~~~~~~~~n~l~~~l~G-~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~  318 (345)
T PRK13499        241 KDLSLKADFSLAKPLLITNVLLSALAG-VMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGAS  318 (345)
T ss_pred             CCcccchhccccchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCC
Confidence            111000 01111    22222223344 445667888888888775554433   3 3777799999998 5999876  


Q ss_pred             ----hhHHHHHHHHHHHHHHhcccC
Q 017782          344 ----PLQLVGAAVTVVAIYLVNFRG  364 (366)
Q Consensus       344 ----~~~~vG~~lIl~g~~l~~~~~  364 (366)
                          ...++|.+++++|..++...+
T Consensus       319 ~k~~~~l~~G~vliI~g~~lig~~~  343 (345)
T PRK13499        319 RRPVRVLSLGCVVIILAANIVGLGN  343 (345)
T ss_pred             ccchhHHHHHHHHHHHHHHHHhhcc
Confidence                567999999999999887654

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.95  E-value=0.00023  Score=68.04  Aligned_cols=136  Identities=12%  Similarity=0.133  Sum_probs=89.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHH
Q 017782          223 GEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAI  302 (366)
Q Consensus       223 G~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l  302 (366)
                      |-.+++.-+........+.++ .-..|. ..+++.++.-.++..+.........   .+...-...|+.-+.+++ .-..
T Consensus        18 gQ~lsl~~~~t~~~s~~l~~~-~~~~P~-~Qs~~~Y~~l~~vy~~~~~~r~~~~---~~~~~~~~~~w~y~lla~-~Dv~   91 (334)
T PF06027_consen   18 GQVLSLCITGTGTFSSLLANK-GVNIPT-FQSFFNYVLLALVYTPILLYRRGFK---KWLKVLKRPWWKYFLLAL-LDVE   91 (334)
T ss_pred             HHHHHHHHHhHHHHHHHHHhc-CccCcH-HHHHHHHHHHHHHHhhhhhhccccc---cchhhcchhHHHHHHHHH-HHHH
Confidence            444444444444444444444 223344 4444444443333333333322211   111222334444444674 4567


Q ss_pred             HHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782          303 SYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG  364 (366)
Q Consensus       303 ~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~  364 (366)
                      +.++.+.|+++.+.+.++++.....++++++++++++++.++.+++|+.+.++|+.++...+
T Consensus        92 aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD  153 (334)
T PF06027_consen   92 ANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSD  153 (334)
T ss_pred             HHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeec
Confidence            99999999999999999999999999999999999999999999999999999998876653

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.88  E-value=0.00014  Score=58.10  Aligned_cols=69  Identities=9%  Similarity=0.176  Sum_probs=60.6

Q ss_pred             HHHHHHHHHHHHHHHhccCChhhHHHh-hhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782          296 SIFGSAISYGVYFYSATKGSLTKLSSL-TFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG  364 (366)
Q Consensus       296 gv~~~~l~~~l~~~al~~~~a~~~s~~-~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~  364 (366)
                      .+++.+++++++..++|+.|.+.+=.+ ..+.-+.+.+++++++||++++.+++|.++|+.|++.++..+
T Consensus        36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            345667799999999999999988666 557888999999999999999999999999999999987643

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.87  E-value=0.00012  Score=59.39  Aligned_cols=69  Identities=20%  Similarity=0.284  Sum_probs=61.0

Q ss_pred             HHHHHHHHHHHHHHHhccCChhhHHHhh-hhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782          296 SIFGSAISYGVYFYSATKGSLTKLSSLT-FLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG  364 (366)
Q Consensus       296 gv~~~~l~~~l~~~al~~~~a~~~s~~~-~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~  364 (366)
                      .+++.+++++++.+++|+++.+.+=.+- .+.-+.+.+.+++++||++++.+++|.++|++|++.++...
T Consensus        36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            4456677999999999999999887764 68899999999999999999999999999999999987643

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.73  E-value=0.0011  Score=55.35  Aligned_cols=131  Identities=16%  Similarity=0.163  Sum_probs=100.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCC-hHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHH
Q 017782          223 GEWWMLLAAQSMAVGTVMVRWVSKYSD-PVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSA  301 (366)
Q Consensus       223 G~l~allaa~~~a~~~v~~r~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~  301 (366)
                      ..++++++..+-++...++.++.++.. +.....+....+.+.+.++....++...    ......+|+..+ -|++ ..
T Consensus         2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~----~~~~~~p~w~~l-GG~l-G~   75 (138)
T PF04657_consen    2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSL----ASLSSVPWWAYL-GGLL-GV   75 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccccc----chhccCChHHhc-cHHH-HH
Confidence            367899999999999999999888776 9999999999999999888877766522    222222343333 3444 45


Q ss_pred             HHHHHHHHHhccCChhhHHHhhhh-HHHHHHHHHHH----HhCCCCChhHHHHHHHHHHHHHH
Q 017782          302 ISYGVYFYSATKGSLTKLSSLTFL-TPMFASIFGFL----YLGETFSPLQLVGAAVTVVAIYL  359 (366)
Q Consensus       302 l~~~l~~~al~~~~a~~~s~~~~l-~Pv~a~i~~~l----~lgE~~~~~~~vG~~lIl~g~~l  359 (366)
                      +-..+..+.+++++++....+... |.+.+++++.+    .-.+++++..++|.++++.|+++
T Consensus        76 ~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   76 FFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            567778888999998887776655 88888888886    23467899999999999999864

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.70  E-value=0.00035  Score=54.91  Aligned_cols=67  Identities=18%  Similarity=0.261  Sum_probs=59.1

Q ss_pred             HHHHHHHHHHHHHhccCChhhH-HHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782          298 FGSAISYGVYFYSATKGSLTKL-SSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG  364 (366)
Q Consensus       298 ~~~~l~~~l~~~al~~~~a~~~-s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~  364 (366)
                      ++..+++++...++|+++.+.+ ++-.-.-.+.+.+.|+++|||+++..+++|.+++++|++..+...
T Consensus        38 v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~s  105 (106)
T COG2076          38 VGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLGS  105 (106)
T ss_pred             HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhcC
Confidence            4456799999999999998876 566677888999999999999999999999999999999987654

>TIGR00803 nst UDP-galactose transporter

Probab=97.65  E-value=0.00032  Score=63.28  Aligned_cols=61  Identities=15%  Similarity=0.036  Sum_probs=56.4

Q ss_pred             HHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHH
Q 017782          299 GSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYL  359 (366)
Q Consensus       299 ~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l  359 (366)
                      ...+++.+..+.+|+.++...+....++++++.+++++++||+++..+++|+.+|+.|+++
T Consensus       161 ~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       161 LNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            3455778899999999999999999999999999999999999999999999999999765

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.65  E-value=0.0015  Score=52.09  Aligned_cols=65  Identities=6%  Similarity=0.114  Sum_probs=56.8

Q ss_pred             HHHHHHHHHHHHHhccCChhhH-HHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcc
Q 017782          298 FGSAISYGVYFYSATKGSLTKL-SSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF  362 (366)
Q Consensus       298 ~~~~l~~~l~~~al~~~~a~~~-s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~  362 (366)
                      ++..+++++...++|++|.+.+ ++...+.-+.+.+.+++++||++++.+++|.++|+.|++..+.
T Consensus        43 ~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lkl  108 (109)
T PRK10650         43 AAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIKL  108 (109)
T ss_pred             HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhcc
Confidence            4567799999999999999877 4445578889999999999999999999999999999998753

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=97.65  E-value=0.059  Score=51.22  Aligned_cols=242  Identities=12%  Similarity=-0.004  Sum_probs=154.2

Q ss_pred             HHHHHHHHHHHHHhhHHHHHHHhhc-C---cCHHHHHHHHHHHHHHHHHHHHHHhCCC----CCC--------ChhHHHH
Q 017782          116 LEWAVLVSPFFFWGTAMVAMKEVLP-K---AGTFFVAAFRLIPAGLLLITFASSQGRK----LPS--------GFNAWVS  179 (366)
Q Consensus       116 ~g~l~llla~~~~g~~~~~~k~~~~-~---~~p~~~~~~R~~~a~l~l~~~~~~~~~~----~~~--------~~~~~~~  179 (366)
                      .-++.++...+.++......|+.-. +   ..|....++--++-.++.+.+++...++    ..+        .++...+
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk   94 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK   94 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence            4577778888899999999997654 3   5677777777666666665555554211    110        1122233


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccccccccc-----------------------------------------ccc------
Q 017782          180 IFLFALVDASCFQGFLAQGLQRTSAGLGSA-----------------------------------------PAF------  212 (366)
Q Consensus       180 ~~~~g~l~~~~~~~~~~~al~~~~~~~a~~-----------------------------------------P~~------  212 (366)
                      ..+-+++ ++..+-++|.++.+.+++...+                                         |..      
T Consensus        95 ~~vPa~i-YalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~  173 (345)
T KOG2234|consen   95 VSVPALI-YALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAK  173 (345)
T ss_pred             HHHHHHH-HHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCcc
Confidence            3333333 4555568999999999887777                                         101      


Q ss_pred             cCCCCccchHHHHHHHHHHHHHHHHHHHHHHhhcCCC--hHHHHHHHHHHHHHHHHHHHHHhcCCC--cccccccCCHHH
Q 017782          213 DESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSD--PVMATGWHMVIGGLPLMVISVLNHDPV--YGESVKELTSSD  288 (366)
Q Consensus       213 ~~~~~~~~~~G~l~allaa~~~a~~~v~~r~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~--~~~~~~~~~~~~  288 (366)
                      ++...+....|....+++++.-+...+...|+.|+-+  ......-...+|.++.++..+..+...  +.+.....+...
T Consensus       174 ~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~v  253 (345)
T KOG2234|consen  174 SESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIV  253 (345)
T ss_pred             CCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHHH
Confidence            1222445567999999999999999999999876543  222333334455554444433322211  122233445556


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhccc
Q 017782          289 ILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFR  363 (366)
Q Consensus       289 ~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~  363 (366)
                      |..++..++-     =.+...-+|+.+-..=.-...+..+++.+.++.+++-+|+...++|+.+|+.++.++...
T Consensus       254 w~vVl~~a~g-----GLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~  323 (345)
T KOG2234|consen  254 WLVVLLNAVG-----GLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLY  323 (345)
T ss_pred             HHHHHHHhcc-----chhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcC
Confidence            6666655533     333444556666655555666777899999999999999999999999999999998743

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.64  E-value=0.00063  Score=53.84  Aligned_cols=68  Identities=21%  Similarity=0.260  Sum_probs=58.9

Q ss_pred             HHHHHHHHHHHHHHhccCChhhH-HHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782          297 IFGSAISYGVYFYSATKGSLTKL-SSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG  364 (366)
Q Consensus       297 v~~~~l~~~l~~~al~~~~a~~~-s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~  364 (366)
                      +++.++++++...++|+.|.+.+ ++..-+.-+.+.+.+++++||++++.+++|.++|+.|++..+..+
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l~~  104 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKLST  104 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhccC
Confidence            35567799999999999998876 444557889999999999999999999999999999999987543

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.56  E-value=0.0021  Score=60.96  Aligned_cols=124  Identities=13%  Similarity=0.094  Sum_probs=93.2

Q ss_pred             HHHHHHHHHHHhhcCC----ChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017782          233 SMAVGTVMVRWVSKYS----DPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYF  308 (366)
Q Consensus       233 ~~a~~~v~~r~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~  308 (366)
                      ++..+.+..+++.++.    .+..+++.+.+...+...+........       ..+...+...+..+ +...++..+-+
T Consensus        11 ~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~-~~~~~~~~~~~   82 (303)
T PF08449_consen   11 GCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFP-------KSRKIPLKKYAILS-FLFFLASVLSN   82 (303)
T ss_pred             HHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcccc-------CCCcChHHHHHHHH-HHHHHHHHHHH
Confidence            4445666777754332    266788888888888777766554411       11222333334445 44566889999


Q ss_pred             HHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782          309 YSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG  364 (366)
Q Consensus       309 ~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~  364 (366)
                      .++++++...-.++....|+..++++++++|++.+..++++..++.+|+.+....+
T Consensus        83 ~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~  138 (303)
T PF08449_consen   83 AALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSD  138 (303)
T ss_pred             HHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecc
Confidence            99999999999999999999999999999999999999999999999999877644

; GO: 0055085 transmembrane transport

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=97.55  E-value=0.013  Score=54.80  Aligned_cols=231  Identities=16%  Similarity=0.149  Sum_probs=148.7

Q ss_pred             hHHHHHHHhhcCcC-HHHHHH--HHHHHHHHHHHHHHHHhC-CCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 017782          130 TAMVAMKEVLPKAG-TFFVAA--FRLIPAGLLLITFASSQG-RKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAG  205 (366)
Q Consensus       130 ~~~~~~k~~~~~~~-p~~~~~--~R~~~a~l~l~~~~~~~~-~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~al~~~~~~  205 (366)
                      .+.+.-|+++...+ |+.+..  ...+...+++...-+.+- +..+.+++..+..+=..++. .+....-..+++|.++.
T Consensus        26 lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf-~~~i~t~~~slk~lnVp  104 (314)
T KOG1444|consen   26 LMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLF-VGMLFTGSKSLKYLNVP  104 (314)
T ss_pred             HHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHH-HHHHHHccccccccCch
Confidence            45667788877533 444444  777766555544333322 22334455555444444443 23344556677787777


Q ss_pred             cccc--------------------c----------------cccCCCCccchHHHHHHHHHHHHHHHHHHHHHHhhc--C
Q 017782          206 LGSA--------------------P----------------AFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSK--Y  247 (366)
Q Consensus       206 ~a~~--------------------P----------------~~~~~~~~~~~~G~l~allaa~~~a~~~v~~r~~~~--~  247 (366)
                      .-++                    |                .....+.+....|..+++...+.-+.+.+..|+..+  +
T Consensus       105 m~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~  184 (314)
T KOG1444|consen  105 MFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLTTAAFVVYVKKSVDSAN  184 (314)
T ss_pred             HHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence            6666                    1                011122233334899999999999999999998643  3


Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHHhcCCC-cccc-cccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHhhhh
Q 017782          248 SDPVMATGWHMVIGGLPLMVISVLNHDPV-YGES-VKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFL  325 (366)
Q Consensus       248 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~s~~~~l  325 (366)
                      .+-...++|..+....+..+...+.++.. ...+ ....+...|..+...++++.++.| +-.+..+..+++..++....
T Consensus       185 l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf~isy-~s~~ct~~~SAtT~tivG~~  263 (314)
T KOG1444|consen  185 LNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGFGISY-TSFLCTRVNSATTTTIVGAK  263 (314)
T ss_pred             ccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHHHHHH-HHHHHHhhccccceeehhhh
Confidence            44566788888888888888777766532 0001 112234456667777766666554 55678888899888888866


Q ss_pred             HHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcc
Q 017782          326 TPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF  362 (366)
Q Consensus       326 ~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~  362 (366)
                      .-..+.+.+.++++++.++..++|..+-+.|.++++.
T Consensus       264 n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~  300 (314)
T KOG1444|consen  264 NKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSY  300 (314)
T ss_pred             hhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhh
Confidence            6667777777777888999999999998888887664

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.53  E-value=0.0003  Score=66.47  Aligned_cols=118  Identities=14%  Similarity=0.126  Sum_probs=86.6

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHH
Q 017782          219 LWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIF  298 (366)
Q Consensus       219 ~~~~G~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~  298 (366)
                      .+..|.++++.++++.++...+.|+-..+.+....-.-                 ..    .........|+    .|++
T Consensus         4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~-----------------~~----~~~~l~~~~W~----~G~~   58 (300)
T PF05653_consen    4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAG-----------------SG----GRSYLRRPLWW----IGLL   58 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc-----------------ch----hhHHHhhHHHH----HHHH
Confidence            45679999999999999999999985433222000000                 00    00001111232    3334


Q ss_pred             HHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhc
Q 017782          299 GSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN  361 (366)
Q Consensus       299 ~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~  361 (366)
                      ...++..+...|+...+++.++++..+..++.++++..++||+++..+++|.++++.|+.++.
T Consensus        59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv  121 (300)
T PF05653_consen   59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV  121 (300)
T ss_pred             HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence            445677788899999999999999999999999999999999999999999999999987654

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.44  E-value=0.0015  Score=50.64  Aligned_cols=57  Identities=19%  Similarity=0.270  Sum_probs=36.0

Q ss_pred             HHHHHHHHHHHHHHhccCChhhHH-HhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHH
Q 017782          297 IFGSAISYGVYFYSATKGSLTKLS-SLTFLTPMFASIFGFLYLGETFSPLQLVGAAVT  353 (366)
Q Consensus       297 v~~~~l~~~l~~~al~~~~a~~~s-~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lI  353 (366)
                      +.+.+++++++.+++|+.+.+.+= +...+..+...+.+++++||++++.+++|.++|
T Consensus        36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            346677999999999999999994 455699999999999999999999999999886

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=97.37  E-value=0.065  Score=49.89  Aligned_cols=216  Identities=13%  Similarity=0.112  Sum_probs=134.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCC-----CCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccccccc-----c---
Q 017782          144 TFFVAAFRLIPAGLLLITFASSQGRKL-----PSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSA-----P---  210 (366)
Q Consensus       144 p~~~~~~R~~~a~l~l~~~~~~~~~~~-----~~~~~~~~~~~~~g~l~~~~~~~~~~~al~~~~~~~a~~-----P---  210 (366)
                      |..++.+.+++-.++-.......+++.     ...++...+-+.-..+..+...++-.++++|++.+.-++     +   
T Consensus        45 PLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FI  124 (349)
T KOG1443|consen   45 PLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFI  124 (349)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHH
Confidence            777777776655554443333322222     223333333333333345777888889999999888777     1   


Q ss_pred             ----------------------------cccCCCCccchHHHHHHHHHHHHHHHHHHHHHHhhcCC-----ChHHHHHHH
Q 017782          211 ----------------------------AFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYS-----DPVMATGWH  257 (366)
Q Consensus       211 ----------------------------~~~~~~~~~~~~G~l~allaa~~~a~~~v~~r~~~~~~-----~~~~~~~~~  257 (366)
                                                  .+.-.+.+....|..+.+++.++-++--...+.+.++.     +|...+...
T Consensus       125 llFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l  204 (349)
T KOG1443|consen  125 LLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHL  204 (349)
T ss_pred             HHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHh
Confidence                                        11223444555688888888888777777766654333     455555555


Q ss_pred             HHHHHHHHHHHHHHhcCCCcc---cccccCCHH-HHHHHHHHHHHHHHHHHH---HHHHHhccCChhhHHHhhhhHHHHH
Q 017782          258 MVIGGLPLMVISVLNHDPVYG---ESVKELTSS-DILALLYTSIFGSAISYG---VYFYSATKGSLTKLSSLTFLTPMFA  330 (366)
Q Consensus       258 ~~~~~v~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~ll~~gv~~~~l~~~---l~~~al~~~~a~~~s~~~~l~Pv~a  330 (366)
                      .-.-.+.+++..+..+++...   ..+...+.. .+..+..++ .++.+++.   ..+.-+.+.+.-..++..-..-+.+
T Consensus       205 ~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~-l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~t  283 (349)
T KOG1443|consen  205 QPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLIS-LGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCT  283 (349)
T ss_pred             hhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHH-HHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHH
Confidence            555555556666655555321   112222222 233333333 23333333   3455677888888999999999999


Q ss_pred             HHHHHHHhCCCCChhHHHHHHHHHHHHHHh
Q 017782          331 SIFGFLYLGETFSPLQLVGAAVTVVAIYLV  360 (366)
Q Consensus       331 ~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~  360 (366)
                      .++|.++.+|+++..-|+|..+.+.|+...
T Consensus       284 l~la~ii~~d~ls~lN~~Gl~i~~agi~~~  313 (349)
T KOG1443|consen  284 LLLAIIILKDQLSLLNWLGLAICLAGILLH  313 (349)
T ss_pred             HHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999987

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=97.30  E-value=0.024  Score=52.01  Aligned_cols=230  Identities=20%  Similarity=0.189  Sum_probs=142.2

Q ss_pred             hhHHHHHHHhhc----Cc----CHHHHHHHHHHHHHHHHHHHHHHhCCCCC------------C---ChhHHHHHHHHHH
Q 017782          129 GTAMVAMKEVLP----KA----GTFFVAAFRLIPAGLLLITFASSQGRKLP------------S---GFNAWVSIFLFAL  185 (366)
Q Consensus       129 g~~~~~~k~~~~----~~----~p~~~~~~R~~~a~l~l~~~~~~~~~~~~------------~---~~~~~~~~~~~g~  185 (366)
                      +.+-+..|++-+    +.    +|+..+..-++-=++++..+.+.+.+...            .   +.+. ...+.-++
T Consensus        16 s~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p-~lfl~Pal   94 (372)
T KOG3912|consen   16 SFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNP-VLFLPPAL   94 (372)
T ss_pred             cHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCc-ceecChHH
Confidence            456778887644    22    36666666666555666666555433211            0   1111 11222344


Q ss_pred             HHHHHHHHHHHHHhhccccccccc----------------------c-------------------c--c-cC--CCCcc
Q 017782          186 VDASCFQGFLAQGLQRTSAGLGSA----------------------P-------------------A--F-DE--SNSSL  219 (366)
Q Consensus       186 l~~~~~~~~~~~al~~~~~~~a~~----------------------P-------------------~--~-~~--~~~~~  219 (366)
                      +..++.. +.|.|+.+|+++.-.+                      +                   .  . ..  .+-+.
T Consensus        95 ~Di~gss-lm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s~  173 (372)
T KOG3912|consen   95 CDIAGSS-LMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYSS  173 (372)
T ss_pred             HHHhhhH-HHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCcccccc
Confidence            4444333 6788888888776444                      1                   0  0 11  11234


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhc--CCChHHHHHHHHHHHHHHHHHHHHHh----cCCCcccccccCCHHHHHHH-
Q 017782          220 WGSGEWWMLLAAQSMAVGTVMVRWVSK--YSDPVMATGWHMVIGGLPLMVISVLN----HDPVYGESVKELTSSDILAL-  292 (366)
Q Consensus       220 ~~~G~l~allaa~~~a~~~v~~r~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l-  292 (366)
                      ...|+++.+.+-+.-|+.+++-+|..+  .++|...+.|..++|.++..+++...    ....+..+ ..-..++|... 
T Consensus       174 iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~-~~g~~eD~~~~~  252 (372)
T KOG3912|consen  174 IITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCN-PRGVLEDWGDAF  252 (372)
T ss_pred             chhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCC-CCcchhhHHHHH
Confidence            557999999999999999999887544  46899999999999976655444321    11111111 11112333321 


Q ss_pred             --------HHHHHHHHHHHHHHHHHH----hccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHh
Q 017782          293 --------LYTSIFGSAISYGVYFYS----ATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLV  360 (366)
Q Consensus       293 --------l~~gv~~~~l~~~l~~~a----l~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~  360 (366)
                              +++...+..++..+++.+    -|..+++.=.++..+...+-=+++.....|.....|+.|..+.+.|++++
T Consensus       253 ~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY  332 (372)
T KOG3912|consen  253 AALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILY  332 (372)
T ss_pred             HHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                    333434444444444443    45678888888888888888888888899999999999999999999986


Q ss_pred             c
Q 017782          361 N  361 (366)
Q Consensus       361 ~  361 (366)
                      +
T Consensus       333 ~  333 (372)
T KOG3912|consen  333 N  333 (372)
T ss_pred             H
Confidence            5

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.22  E-value=0.013  Score=49.23  Aligned_cols=139  Identities=12%  Similarity=0.176  Sum_probs=94.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCC-hHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHH
Q 017782          222 SGEWWMLLAAQSMAVGTVMVRWVSKYSD-PVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGS  300 (366)
Q Consensus       222 ~G~l~allaa~~~a~~~v~~r~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~  300 (366)
                      ...++++++.++-.+..-+.-++.+..+ |.........+|.+.+..+.+..+.....   .......|+..+ -|+++ 
T Consensus         5 l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~---a~~~~~pwW~~~-GG~lG-   79 (150)
T COG3238           5 LYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGL---AAVASAPWWAWI-GGLLG-   79 (150)
T ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCch---hhccCCchHHHH-ccchh-
Confidence            4577888999999999988888877665 88888888999888888776663332211   111222333332 23333 


Q ss_pred             HHHHHHHHHHhccCChh-hHHHhhhhHHHHHHHHHHHHhC----CCCChhHHHHHHHHHHHHHHhcccCC
Q 017782          301 AISYGVYFYSATKGSLT-KLSSLTFLTPMFASIFGFLYLG----ETFSPLQLVGAAVTVVAIYLVNFRGS  365 (366)
Q Consensus       301 ~l~~~l~~~al~~~~a~-~~s~~~~l~Pv~a~i~~~l~lg----E~~~~~~~vG~~lIl~g~~l~~~~~~  365 (366)
                      .+--+.......+++++ .+.....-|.+.+++++.+=+.    .+++...++|++++++|+++.+++++
T Consensus        80 a~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~~~  149 (150)
T COG3238          80 AIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRFGA  149 (150)
T ss_pred             hhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhccccc
Confidence            22333344555665554 5556666788999998877665    56899999999999999877777654

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.19  E-value=0.0047  Score=57.04  Aligned_cols=110  Identities=15%  Similarity=0.217  Sum_probs=78.6

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHhh-hhHH
Q 017782          249 DPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLT-FLTP  327 (366)
Q Consensus       249 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~s~~~-~l~P  327 (366)
                      +|...+.-..+.+.++.++..++ .++.+     ..+...++.-+..| +.-.+++..+++++++.+.+++-++. -++.
T Consensus        11 ~~~~Q~lG~t~Gali~alv~~~~-~~p~~-----~~~~~~~~~~~lsG-~~W~iGq~~qf~s~~~~GVS~tmPiStg~QL   83 (269)
T PF06800_consen   11 KPANQILGTTIGALIFALVVFLF-RQPAF-----SMSGTSFIVAFLSG-AFWAIGQIGQFKSFKKIGVSKTMPISTGLQL   83 (269)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHH-hCCCc-----chHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhcceeeeccchhHHH
Confidence            44444444444444444444443 33321     22346666666667 45677999999999999999999998 5688


Q ss_pred             HHHHHHHHHHhCCCCChhHHH----HHHHHHHHHHHhcccCC
Q 017782          328 MFASIFGFLYLGETFSPLQLV----GAAVTVVAIYLVNFRGS  365 (366)
Q Consensus       328 v~a~i~~~l~lgE~~~~~~~v----G~~lIl~g~~l~~~~~~  365 (366)
                      +.+.++++++|||+-+..+++    +.++|+.|+++..++++
T Consensus        84 vg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~  125 (269)
T PF06800_consen   84 VGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDK  125 (269)
T ss_pred             HHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccc
Confidence            999999999999998876544    66799999999887764

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.14  E-value=0.0067  Score=58.16  Aligned_cols=137  Identities=15%  Similarity=0.076  Sum_probs=96.2

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHH----HhcCCCcccccccCCHHHHHHHHHH
Q 017782          220 WGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISV----LNHDPVYGESVKELTSSDILALLYT  295 (366)
Q Consensus       220 ~~~G~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ll~~  295 (366)
                      ...|.++.+++++|++.+.+-.|+. +.-+-...  |. +.+. +..++..    ....+.+.......+...+..-+..
T Consensus         5 ~~~G~~~~~i~~~~~GS~~~p~K~~-k~w~wE~~--W~-v~gi-~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~   79 (345)
T PRK13499          5 IILGIIWHLIGGASSGSFYAPFKKV-KKWSWETM--WS-VGGI-FSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLF   79 (345)
T ss_pred             hHHHHHHHHHHHHHhhccccccccc-CCCchhHH--HH-HHHH-HHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHH
Confidence            4569999999999999999999995 44443222  32 2222 2221111    1122333333344567777666666


Q ss_pred             HHHHHHHHHHHHHHHhccCChhhHHHhh-hhHHHHHHHHHHHHhCCCC---C----hhHHHHHHHHHHHHHHhcc
Q 017782          296 SIFGSAISYGVYFYSATKGSLTKLSSLT-FLTPMFASIFGFLYLGETF---S----PLQLVGAAVTVVAIYLVNF  362 (366)
Q Consensus       296 gv~~~~l~~~l~~~al~~~~a~~~s~~~-~l~Pv~a~i~~~l~lgE~~---~----~~~~vG~~lIl~g~~l~~~  362 (366)
                      |+ .-.+++..+..++|+.+.++.-++. -++.+.+.+++.+++||..   +    ...++|.+++++|+.+..+
T Consensus        80 G~-~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~  153 (345)
T PRK13499         80 GA-LWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGR  153 (345)
T ss_pred             HH-HHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence            74 4577999999999999999887765 4689999999999999865   2    3468899999999999887

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=97.00  E-value=0.00059  Score=61.22  Aligned_cols=232  Identities=17%  Similarity=0.136  Sum_probs=147.6

Q ss_pred             HHHHHHHHHHHHhhHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 017782          117 EWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLA  196 (366)
Q Consensus       117 g~l~llla~~~~g~~~~~~k~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~  196 (366)
                      .+++.++.++.||+........  +-+|.+...--- ++++++....+....+.. ..+.+...++.|.++ ...+...+
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~--GG~p~qQ~lGtT-~GALifaiiv~~~~~p~~-T~~~~iv~~isG~~W-s~GQ~~Qf   77 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKF--GGKPYQQTLGTT-LGALIFAIIVFLFVSPEL-TLTIFIVGFISGAFW-SFGQANQF   77 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeec--CCChhHhhhhcc-HHHHHHHHHHheeecCcc-chhhHHHHHHhhhHh-hhhhhhhh
Confidence            5788899999999998766522  345655554433 334444333333333322 335666667777765 55666899


Q ss_pred             HHhhccccccccc-----------------------c--------------------ccc------CCCCccchHHHHHH
Q 017782          197 QGLQRTSAGLGSA-----------------------P--------------------AFD------ESNSSLWGSGEWWM  227 (366)
Q Consensus       197 ~al~~~~~~~a~~-----------------------P--------------------~~~------~~~~~~~~~G~l~a  227 (366)
                      .+.++..++.+..                       |                    ...      .++.+...+|....
T Consensus        78 ka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~~~~n~kkgi~~L  157 (288)
T COG4975          78 KAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEENPSNLKKGIVIL  157 (288)
T ss_pred             hheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccccccChHhhhhheeee
Confidence            9999999888766                       1                    011      12233455788888


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHH
Q 017782          228 LLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVY  307 (366)
Q Consensus       228 llaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~  307 (366)
                      +.+.+.|-.|.++.+...  .|......-+. ++.++..+..-..+..      ...+...|..+ ..|+ .-+++...+
T Consensus       158 ~iSt~GYv~yvvl~~~f~--v~g~saiLPqA-iGMv~~ali~~~~~~~------~~~~K~t~~ni-i~G~-~Wa~GNl~m  226 (288)
T COG4975         158 LISTLGYVGYVVLFQLFD--VDGLSAILPQA-IGMVIGALILGFFKME------KRFNKYTWLNI-IPGL-IWAIGNLFM  226 (288)
T ss_pred             eeeccceeeeEeeecccc--ccchhhhhHHH-HHHHHHHHHHhhcccc------cchHHHHHHHH-hhHH-HHHhhHHHH
Confidence            889999999999888763  44444333332 2222222222221111      12223344433 3563 356688899


Q ss_pred             HHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhH----HHHHHHHHHHHHHhcccC
Q 017782          308 FYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQ----LVGAAVTVVAIYLVNFRG  364 (366)
Q Consensus       308 ~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~----~vG~~lIl~g~~l~~~~~  364 (366)
                      ..+.++.+.+..=.+.-+..+++.+-|.++++|+=|..+    ++|..+++.|..+....|
T Consensus       227 l~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg~~K  287 (288)
T COG4975         227 LLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLGIAK  287 (288)
T ss_pred             HHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhheec
Confidence            999999888888888888999999999999999988765    567788888877765444

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=96.82  E-value=0.0076  Score=55.29  Aligned_cols=78  Identities=21%  Similarity=0.259  Sum_probs=67.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782          286 SSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG  364 (366)
Q Consensus       286 ~~~~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~  364 (366)
                      .++...+..-+ +...+...+.+.++++.+++.-.++..+..++++++.+++++++++..||++..+++.|+.+++...
T Consensus        14 ~~~~~~~~vPA-~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~   91 (244)
T PF04142_consen   14 PKDTLKLAVPA-LLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSS   91 (244)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCC
Confidence            34444444445 3467789999999999999999999999999999999999999999999999999999999987654

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=96.46  E-value=0.068  Score=48.95  Aligned_cols=143  Identities=14%  Similarity=0.021  Sum_probs=102.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHHHhcCCCccc-ccccCCHHHHHHHHHHHH
Q 017782          221 GSGEWWMLLAAQSMAVGTVMVRWVSKY--SDPVMATGWHMVIGGLPLMVISVLNHDPVYGE-SVKELTSSDILALLYTSI  297 (366)
Q Consensus       221 ~~G~l~allaa~~~a~~~v~~r~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~gv  297 (366)
                      ..|..+.-++-++=|+---++.+..+.  .+....+++...+|.+.++......++..-.. .-...+.+.....+..+ 
T Consensus       189 ~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s-  267 (367)
T KOG1582|consen  189 LIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFS-  267 (367)
T ss_pred             eeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHH-
Confidence            357776666666666555556554333  23466777888888887776665554431110 01122344555555555 


Q ss_pred             HHHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782          298 FGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG  364 (366)
Q Consensus       298 ~~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~  364 (366)
                      ..+.+++.....-++..++..++.+....=-++++++++++..+++..-.-|..+|+.|+++-...|
T Consensus       268 ~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk  334 (367)
T KOG1582|consen  268 LAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK  334 (367)
T ss_pred             HHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence            4456688888888999999999999999999999999999999999999999999999999977665

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=96.20  E-value=0.0033  Score=56.57  Aligned_cols=132  Identities=17%  Similarity=0.174  Sum_probs=96.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHH
Q 017782          223 GEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAI  302 (366)
Q Consensus       223 G~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l  302 (366)
                      +.+++|+=++.|+..-....|.  .-+|...+.-..+.+.++.+.+.++ ..|       ..+...+..-+..|.+ -.+
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~--GG~p~qQ~lGtT~GALifaiiv~~~-~~p-------~~T~~~~iv~~isG~~-Ws~   71 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKF--GGKPYQQTLGTTLGALIFAIIVFLF-VSP-------ELTLTIFIVGFISGAF-WSF   71 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeec--CCChhHhhhhccHHHHHHHHHHhee-ecC-------ccchhhHHHHHHhhhH-hhh
Confidence            5788999999999887776665  3345555555455555554444443 222       3455556555555644 456


Q ss_pred             HHHHHHHHhccCChhhHHHhhh-hHHHHHHHHHHHHhCCCCChhHH----HHHHHHHHHHHHhcccCC
Q 017782          303 SYGVYFYSATKGSLTKLSSLTF-LTPMFASIFGFLYLGETFSPLQL----VGAAVTVVAIYLVNFRGS  365 (366)
Q Consensus       303 ~~~l~~~al~~~~a~~~s~~~~-l~Pv~a~i~~~l~lgE~~~~~~~----vG~~lIl~g~~l~~~~~~  365 (366)
                      +|....++++..+.+++.++.. +|.|-+.++|++.|||+.+..++    +..++++.|+++..+++|
T Consensus        72 GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~  139 (288)
T COG4975          72 GQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR  139 (288)
T ss_pred             hhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence            9999999999999999999865 69999999999999999988764    455688999999888764

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=96.15  E-value=0.012  Score=53.81  Aligned_cols=147  Identities=16%  Similarity=0.096  Sum_probs=102.5

Q ss_pred             CccchHHHHHHHHHHHHHHHHHHHHHHhhcCC-C-hHHHHHHHHHHHHHHHHHHHHHhcCCCccccccc-CCHHHHHHHH
Q 017782          217 SSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYS-D-PVMATGWHMVIGGLPLMVISVLNHDPVYGESVKE-LTSSDILALL  293 (366)
Q Consensus       217 ~~~~~~G~l~allaa~~~a~~~v~~r~~~~~~-~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ll  293 (366)
                      +.....|.+++.++.++-|+..+.+|+..... | -...++|.-+.+.+..++...+.++.......+. ++..-|..+.
T Consensus       180 ~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mt  259 (347)
T KOG1442|consen  180 GTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMT  259 (347)
T ss_pred             CccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHH
Confidence            34456799999999999999999999864433 3 3456677778888888887776655421111112 2455677777


Q ss_pred             HHHHHHHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782          294 YTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG  364 (366)
Q Consensus       294 ~~gv~~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~  364 (366)
                      ..|+++..++|.- .+=+|-.+|-.-.+-....-..-.+++..+++|.-+..-|-|-.+|++|...+.+-|
T Consensus       260 LsglfgF~mgyvT-g~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk  329 (347)
T KOG1442|consen  260 LSGLFGFAMGYVT-GWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVK  329 (347)
T ss_pred             HHHHHHHHhhhee-eEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHH
Confidence            7777766555432 222455566555555555666677888899999999999999999999988877644

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=95.76  E-value=0.027  Score=45.00  Aligned_cols=109  Identities=16%  Similarity=0.170  Sum_probs=74.6

Q ss_pred             HHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017782          229 LAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYF  308 (366)
Q Consensus       229 laa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~  308 (366)
                      +-++.|++..-+.|+-.+..+...... +..-....     ++            .+++   +.+  .+.....+-..|+
T Consensus         3 ~Vg~~WG~Tnpfik~g~~~~~~~~~~~-~~~~~~~~-----Ll------------~n~~---y~i--pf~lNq~GSv~f~   59 (113)
T PF10639_consen    3 LVGILWGCTNPFIKRGSSGLEKVKASL-QLLQEIKF-----LL------------LNPK---YII--PFLLNQSGSVLFF   59 (113)
T ss_pred             eehHHhcCchHHHHHHHhhcCCccchH-HHHHHHHH-----HH------------HhHH---HHH--HHHHHHHHHHHHH
Confidence            456788889999998765554433221 21111111     00            0122   222  2222344677889


Q ss_pred             HHhccCChhhHHHhh-hhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHh
Q 017782          309 YSATKGSLTKLSSLT-FLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLV  360 (366)
Q Consensus       309 ~al~~~~a~~~s~~~-~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~  360 (366)
                      +.+.+.+.+.+.++. .+.-+++++.++++.+|..+...++|.++|+.|+.+.
T Consensus        60 ~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   60 LLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            999999999999995 8899999999988888888999999999999998763

Many members are annotated as potential transmembrane proteins.

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=95.67  E-value=0.066  Score=47.64  Aligned_cols=142  Identities=14%  Similarity=0.154  Sum_probs=107.7

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHH
Q 017782          219 LWGSGEWWMLLAAQSMAVGTVMVRWVSKY--SDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTS  296 (366)
Q Consensus       219 ~~~~G~l~allaa~~~a~~~v~~r~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g  296 (366)
                      ..+.|.+++....+.-+.+.+..|+..+-  ..-...++|.-+.+..+++...+..+++.-.......+.+.+..+...|
T Consensus       152 ~lN~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISg  231 (309)
T COG5070         152 ILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISG  231 (309)
T ss_pred             ccCCceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHH
Confidence            45669999999999999999888875432  2345677888899988888888888776432223344556666666677


Q ss_pred             HHHHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhc
Q 017782          297 IFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN  361 (366)
Q Consensus       297 v~~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~  361 (366)
                      +...+ --++-.|.++..+.+.-+++..+.-.-.++-|.++++|+.+...+....+-..+..++.
T Consensus       232 l~svg-iSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYa  295 (309)
T COG5070         232 LCSVG-ISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYA  295 (309)
T ss_pred             HHHhh-hhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHH
Confidence            54444 44567888999999999999999999999999999999999998888776665555543

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=95.34  E-value=0.077  Score=46.32  Aligned_cols=144  Identities=9%  Similarity=-0.095  Sum_probs=94.0

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHhhcCCChHH---HHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHH
Q 017782          219 LWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVM---ATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYT  295 (366)
Q Consensus       219 ~~~~G~l~allaa~~~a~~~v~~r~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~  295 (366)
                      .-..|..++.+++...|+|-+..|++....+--.   .+.-..++..++...-.++..-... .++.......|..+...
T Consensus       132 ~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~V-E~~qsFA~~PWG~l~G~  210 (290)
T KOG4314|consen  132 DEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAFTGV-EHLQSFAAAPWGCLCGA  210 (290)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHhch-HHHHHHhhCCchhhhhH
Confidence            3456999999999999999999999754443222   2211122222222211111111111 11233344567777666


Q ss_pred             HHHHHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782          296 SIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG  364 (366)
Q Consensus       296 gv~~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~  364 (366)
                      +.+... -..+.+.++..+.|...++-+.....-.+.+..++-+-..+...++|..+|+.|-+++..++
T Consensus       211 A~L~lA-FN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~  278 (290)
T KOG4314|consen  211 AGLSLA-FNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPE  278 (290)
T ss_pred             HHHHHH-HhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheeccc
Confidence            544333 45667788889999999998888888888999877666678888999999999999887765

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=94.93  E-value=0.85  Score=43.19  Aligned_cols=80  Identities=11%  Similarity=0.164  Sum_probs=58.1

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHhhhhH-HHHHHHHHHHHhCCC--CCh----hHHHHHHHHHHHH
Q 017782          285 TSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLT-PMFASIFGFLYLGET--FSP----LQLVGAAVTVVAI  357 (366)
Q Consensus       285 ~~~~~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~s~~~~l~-Pv~a~i~~~l~lgE~--~~~----~~~vG~~lIl~g~  357 (366)
                      .+..|..++.+ +++........|+|+++.+++.+.++.+.. -..+.+-+.++++|.  .+.    ....|..+++.|+
T Consensus       209 ~~~~y~l~~~~-v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV  287 (300)
T PF05653_consen  209 YPLTYLLLLVL-VVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGV  287 (300)
T ss_pred             hhHHHHHHHHH-HHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhh
Confidence            35556555443 355566777889999999999999888874 455666667778876  444    3467788999999


Q ss_pred             HHhcccCC
Q 017782          358 YLVNFRGS  365 (366)
Q Consensus       358 ~l~~~~~~  365 (366)
                      ++....|+
T Consensus       288 ~lL~~~~~  295 (300)
T PF05653_consen  288 FLLSSSKD  295 (300)
T ss_pred             heeeccCc
Confidence            99887664

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=94.29  E-value=0.018  Score=53.82  Aligned_cols=120  Identities=12%  Similarity=0.092  Sum_probs=89.4

Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHH
Q 017782          218 SLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSI  297 (366)
Q Consensus       218 ~~~~~G~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv  297 (366)
                      ..+..|.++++.+.++.+...++.|+-.++...   .              ..-.++..    ........|    +.|+
T Consensus        17 ~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~---~--------------~~ra~~gg----~~yl~~~~W----w~G~   71 (335)
T KOG2922|consen   17 SDNIIGLVLAISSSIFIGSSFILKKKGLKRAGA---S--------------GLRAGEGG----YGYLKEPLW----WAGM   71 (335)
T ss_pred             cCceeeeeehhhccEEEeeehhhhHHHHHHHhh---h--------------cccccCCC----cchhhhHHH----HHHH
Confidence            344568999999999999999888885443221   0              00111111    111111223    4577


Q ss_pred             HHHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcc
Q 017782          298 FGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF  362 (366)
Q Consensus       298 ~~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~  362 (366)
                      +..++|-...+.|+...+++.++++..+..+..++++..+++|++++...+|+++.++|..++..
T Consensus        72 ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~  136 (335)
T KOG2922|consen   72 LTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVI  136 (335)
T ss_pred             HHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEE
Confidence            77788999999999999999999999999999999999999999999999999988888776543

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=94.12  E-value=1.9  Score=41.22  Aligned_cols=114  Identities=16%  Similarity=0.139  Sum_probs=79.0

Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccc------cCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHH
Q 017782          248 SDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVK------ELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSS  321 (366)
Q Consensus       248 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~s~  321 (366)
                      +.+.+..+..=++-.+++....+............      ...+.+...+..-+ +...+-..+++.++.+.+++.-.+
T Consensus        45 f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~vPa-~iYalqNnl~yval~~ldaatyqV  123 (345)
T KOG2234|consen   45 FLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSVPA-LIYALQNNLQYVALSNLDAATYQV  123 (345)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHHHH-HHHHHhhhHHHHHHhcCCchhhhh
Confidence            44555555555666666666655542110000011      11222222222223 334556779999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcc
Q 017782          322 LTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF  362 (366)
Q Consensus       322 ~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~  362 (366)
                      ...+..+.++++.+++++++++..||....+...|+.+++.
T Consensus       124 t~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~  164 (345)
T KOG2234|consen  124 TYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQL  164 (345)
T ss_pred             hhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999983

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=93.62  E-value=0.34  Score=44.10  Aligned_cols=95  Identities=12%  Similarity=0.015  Sum_probs=81.5

Q ss_pred             HHHHHHHHHHHHHHhhHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHH
Q 017782          115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGF  194 (366)
Q Consensus       115 ~~g~l~llla~~~~g~~~~~~k~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~  194 (366)
                      ..|..+.+.+..+|+...+..|.+.+..+...-+..-+.+++++.+|+-.........++......+..+++.....+.+
T Consensus       147 p~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~~g~a~gm~vAaviv~Pig~~~ag~~l~~p~ll~laLgvavlSSalPYsL  226 (292)
T COG5006         147 PVGVALALGAGACWALYIVLGQRAGRAEHGTAGVAVGMLVAALIVLPIGAAQAGPALFSPSLLPLALGVAVLSSALPYSL  226 (292)
T ss_pred             HHHHHHHHHHhHHHHHHHHHcchhcccCCCchHHHHHHHHHHHHHhhhhhhhcchhhcChHHHHHHHHHHHHhcccchHH
Confidence            57899999999999999999998886666667778889999999999988776665566678888899999999999999


Q ss_pred             HHHHhhccccccccc
Q 017782          195 LAQGLQRTSAGLGSA  209 (366)
Q Consensus       195 ~~~al~~~~~~~a~~  209 (366)
                      ...++++.|...-++
T Consensus       227 EmiAL~rlp~~~F~~  241 (292)
T COG5006         227 EMIALRRLPARTFGT  241 (292)
T ss_pred             HHHHHhhCChhHHHH
Confidence            999999999866555

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=93.40  E-value=1.3  Score=36.80  Aligned_cols=92  Identities=14%  Similarity=0.026  Sum_probs=67.7

Q ss_pred             HHHHHHHHHHHHhhHHHHHHHhhc-------CcCHHHHHHHHHHHHHHHHHHHHHHhCCCCC--------C-----ChhH
Q 017782          117 EWAVLVSPFFFWGTAMVAMKEVLP-------KAGTFFVAAFRLIPAGLLLITFASSQGRKLP--------S-----GFNA  176 (366)
Q Consensus       117 g~l~llla~~~~g~~~~~~k~~~~-------~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~--------~-----~~~~  176 (366)
                      |.++.+.+.++.+...+..|...+       +.++.++..+-...+.++++|+....++...        .     +.+.
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            467889999999999999997654       4789999999999999999988776554320        0     1233


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccccccccc
Q 017782          177 WVSIFLFALVDASCFQGFLAQGLQRTSAGLGSA  209 (366)
Q Consensus       177 ~~~~~~~g~l~~~~~~~~~~~al~~~~~~~a~~  209 (366)
                      +...+..|+++ ...+.+.+..++++++-..++
T Consensus        81 ~~~~~~~~~~~-~~~n~~~f~~i~~tS~lt~~v  112 (153)
T PF03151_consen   81 IFLLILSGLLA-FLYNLSSFLLIKLTSPLTYSV  112 (153)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHHhhhcChhHHHH
Confidence            44445555555 455558899999998877666

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=93.33  E-value=0.072  Score=46.50  Aligned_cols=62  Identities=18%  Similarity=0.349  Sum_probs=57.6

Q ss_pred             HHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782          303 SYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG  364 (366)
Q Consensus       303 ~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~  364 (366)
                      +.++|..|+++++++.++.+..-.-.+..+++|+++||++....++.+++.+.|++.+.+.+
T Consensus        66 aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~D  127 (290)
T KOG4314|consen   66 ANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYAD  127 (290)
T ss_pred             CCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEecc
Confidence            68899999999999999999999999999999999999999999999999999998877543

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=92.50  E-value=1.8  Score=40.02  Aligned_cols=139  Identities=14%  Similarity=0.155  Sum_probs=80.9

Q ss_pred             chHHHHHHHHHHHHHHHHHHHH----HHhhcCCChHHHHHHHHHHHHHHHHHHH---------HHhcCCCcccccccCCH
Q 017782          220 WGSGEWWMLLAAQSMAVGTVMV----RWVSKYSDPVMATGWHMVIGGLPLMVIS---------VLNHDPVYGESVKELTS  286 (366)
Q Consensus       220 ~~~G~l~allaa~~~a~~~v~~----r~~~~~~~~~~~~~~~~~~~~v~~~~~~---------~~~~~~~~~~~~~~~~~  286 (366)
                      |..|..+...+-+.-|.--+..    ||.+|  ++.+.++|.-+......+...         ....+..........-+
T Consensus       162 w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGK--h~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP  239 (330)
T KOG1583|consen  162 WLIGIALLVFALLLSAYMGIYQETTYQKYGK--HWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVP  239 (330)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--ChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCcccc
Confidence            4456555444444444444444    44433  577777887766655444321         01111000000011124


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhc
Q 017782          287 SDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN  361 (366)
Q Consensus       287 ~~~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~  361 (366)
                      ..|..++... +.+..+.--.+.--...++-.+++...+.=.+..+++++.+..+.+++-|+|+++|..|.++..
T Consensus       240 ~~~~yLl~n~-L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa  313 (330)
T KOG1583|consen  240 SMWVYLLFNV-LTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFA  313 (330)
T ss_pred             HHHHHHHHHH-HHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHH
Confidence            4565555433 2222222222333345567778888999999999999999999999999999999999998754

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=92.30  E-value=0.11  Score=49.33  Aligned_cols=118  Identities=22%  Similarity=0.294  Sum_probs=79.6

Q ss_pred             HHHHHhhcC--C-ChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 017782          239 VMVRWVSKY--S-DPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGS  315 (366)
Q Consensus       239 v~~r~~~~~--~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al~~~~  315 (366)
                      +..|++.+.  . .|...+..+...+.+.....-.....+.    ....+...|..++-+|++ ..++.++-+.++++.+
T Consensus        34 ~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~----~~~~~~~~~~~llpl~~~-~~~~~v~~n~Sl~~v~  108 (316)
T KOG1441|consen   34 ILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPP----SKISSKLPLRTLLPLGLV-FCISHVLGNVSLSYVP  108 (316)
T ss_pred             EeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCC----CccccccchHHHHHHHHH-HHHHHHhcchhhhccc
Confidence            344766552  2 2455556655555554444432222221    112234567777777744 5669999999999999


Q ss_pred             hhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhc
Q 017782          316 LTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN  361 (366)
Q Consensus       316 a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~  361 (366)
                      .+.....-.++|++..++++++.+|+.+...+.-...|+.|+.+..
T Consensus       109 VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias  154 (316)
T KOG1441|consen  109 VSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIAS  154 (316)
T ss_pred             hhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEee
Confidence            9999999999999999999999999988877665555555555443

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=91.87  E-value=0.47  Score=37.80  Aligned_cols=55  Identities=20%  Similarity=0.243  Sum_probs=41.3

Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCC----CChhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 017782          149 AFRLIPAGLLLITFASSQGRKLP----SGFNAWVSIFLFALVDASCFQGFLAQGLQRTS  203 (366)
Q Consensus       149 ~~R~~~a~l~l~~~~~~~~~~~~----~~~~~~~~~~~~g~l~~~~~~~~~~~al~~~~  203 (366)
                      .+|+.++.+++..+...+++...    .+++.+.+....|+++....+.++++|+++++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~   60 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP   60 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence            68999999998887777554311    12355667777788887778889999999988

>PRK02237 hypothetical protein; Provisional

Probab=91.63  E-value=1.5  Score=34.45  Aligned_cols=47  Identities=11%  Similarity=0.128  Sum_probs=40.5

Q ss_pred             HHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccCC
Q 017782          319 LSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS  365 (366)
Q Consensus       319 ~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~~  365 (366)
                      -+.+.-...+.+.++++.+-|++|+.+.++|+++.+.|..++....|
T Consensus        62 YAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~pR  108 (109)
T PRK02237         62 YAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAPR  108 (109)
T ss_pred             HHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecCC
Confidence            35566677788899999999999999999999999999998876654

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=90.67  E-value=0.27  Score=47.20  Aligned_cols=65  Identities=12%  Similarity=0.155  Sum_probs=61.3

Q ss_pred             HHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782          300 SAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG  364 (366)
Q Consensus       300 ~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~  364 (366)
                      -+++.+.++.|+++.+.+-.+++..+.-+|+.++|.++-+|++++...++..+-++|++++...+
T Consensus       169 WF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~  233 (416)
T KOG2765|consen  169 WFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGD  233 (416)
T ss_pred             HHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEecc
Confidence            46789999999999999999999999999999999999999999999999999999999988763

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=90.18  E-value=5.7  Score=37.98  Aligned_cols=140  Identities=11%  Similarity=-0.023  Sum_probs=87.3

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHH-HHHhcCCCcccccccCCHHHHHHHHHHHHH
Q 017782          220 WGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVI-SVLNHDPVYGESVKELTSSDILALLYTSIF  298 (366)
Q Consensus       220 ~~~G~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~  298 (366)
                      ...|.++..+++++.+.+.+=.||+. +-+-...=..+.+++- +.+|. .....-|.+.......+...+......|++
T Consensus         5 ii~Gii~h~iGg~~~~sfy~P~kkvk-~WsWEs~Wlv~gi~sw-li~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~l   82 (344)
T PF06379_consen    5 IILGIIFHAIGGFASGSFYVPFKKVK-GWSWESYWLVQGIFSW-LIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGVL   82 (344)
T ss_pred             HHHHHHHHHHHHHHhhhhccchhhcC-CccHHHHHHHHHHHHH-HHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHHH
Confidence            45699999999999999999999983 3332222222222222 22222 112223333323344455566666667744


Q ss_pred             HHHHHHHHHHHHhccCChhhH-HHhhhhHHHHHHHHHHHHhC-------CCCChhHHHHHHHHHHHHHHhcc
Q 017782          299 GSAISYGVYFYSATKGSLTKL-SSLTFLTPMFASIFGFLYLG-------ETFSPLQLVGAAVTVVAIYLVNF  362 (366)
Q Consensus       299 ~~~l~~~l~~~al~~~~a~~~-s~~~~l~Pv~a~i~~~l~lg-------E~~~~~~~vG~~lIl~g~~l~~~  362 (366)
                       -+++-..|-.++|+++.+.. ++..-+.-+++.++--++.|       ++-....++|.++.++|+.+..+
T Consensus        83 -WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~  153 (344)
T PF06379_consen   83 -WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGK  153 (344)
T ss_pred             -HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhH
Confidence             56788889999999987764 34455566666666555543       23345789999999999998765

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=89.11  E-value=13  Score=35.21  Aligned_cols=126  Identities=17%  Similarity=0.152  Sum_probs=81.2

Q ss_pred             HHHHHHHHHH----HHHHHHhhcCCC-h--HHHHHHHHHHHHHHHHHHHHH--hcCCCcccccccCCHHHHH--HHHHHH
Q 017782          228 LLAAQSMAVG----TVMVRWVSKYSD-P--VMATGWHMVIGGLPLMVISVL--NHDPVYGESVKELTSSDIL--ALLYTS  296 (366)
Q Consensus       228 llaa~~~a~~----~v~~r~~~~~~~-~--~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~--~ll~~g  296 (366)
                      ++++++|++.    .+..|.+...++ +  ...+.+|.++..+.....-..  .+.+.+    .....+.|.  .+++.+
T Consensus        14 l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l----~~~~~kk~~P~~~lf~~   89 (314)
T KOG1444|consen   14 LLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPL----DLRTAKKWFPVSLLFVG   89 (314)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCc----ChHHHHHHccHHHHHHH
Confidence            3444444443    445566544443 2  334457777777666554321  111111    111233342  334444


Q ss_pred             HHHHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhccc
Q 017782          297 IFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFR  363 (366)
Q Consensus       297 v~~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~  363 (366)
                      -+-+      -.+++|+++.....++..+.|++.++....++|.+++...+.....+++|.......
T Consensus        90 ~i~t------~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~  150 (314)
T KOG1444|consen   90 MLFT------GSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFT  150 (314)
T ss_pred             HHHH------ccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccc
Confidence            3333      378999999999999999999999999999999999999999999888888776543

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=88.55  E-value=1.1  Score=35.27  Aligned_cols=46  Identities=17%  Similarity=0.275  Sum_probs=40.3

Q ss_pred             HHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccCC
Q 017782          320 SSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS  365 (366)
Q Consensus       320 s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~~  365 (366)
                      +.+.-...+.+.++++.+-|++|+.+.++|+++.+.|..++.+..|
T Consensus        61 AAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR  106 (107)
T PF02694_consen   61 AAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR  106 (107)
T ss_pred             HHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence            4455666788999999999999999999999999999999987765

; GO: 0016020 membrane

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=87.80  E-value=1.3  Score=41.11  Aligned_cols=66  Identities=14%  Similarity=0.219  Sum_probs=59.2

Q ss_pred             HHHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhccc
Q 017782          298 FGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFR  363 (366)
Q Consensus       298 ~~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~  363 (366)
                      ++-..+..+.+.++...+++.-.++.-...+|.-+++.-+++.+++..||.|...|.+|++++...
T Consensus        94 l~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~  159 (372)
T KOG3912|consen   94 LCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL  159 (372)
T ss_pred             HHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence            445557778889999999999999999999999999999999999999999999999999887543

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=87.14  E-value=6.7  Score=32.55  Aligned_cols=91  Identities=13%  Similarity=-0.033  Sum_probs=60.0

Q ss_pred             HHHHHHHHHHHhhHHHHHHHhhcCcC-HHHHHHHHHHHHHHHHHHHHHHhCCCC-CCChhHHHHHHHHHHHHHHHHHHHH
Q 017782          118 WAVLVSPFFFWGTAMVAMKEVLPKAG-TFFVAAFRLIPAGLLLITFASSQGRKL-PSGFNAWVSIFLFALVDASCFQGFL  195 (366)
Q Consensus       118 ~l~llla~~~~g~~~~~~k~~~~~~~-p~~~~~~R~~~a~l~l~~~~~~~~~~~-~~~~~~~~~~~~~g~l~~~~~~~~~  195 (366)
                      +++.+++..+-+....+.-.+.+..+ |...+++-+..+.+++..+....+++. ...++..++..+-|+++ ..+..+.
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~~lGG~lG-~~~V~~~   81 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWAYLGGLLG-VFFVLSN   81 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHHhccHHHH-HHHHHHH
Confidence            44556666666666666666666665 999999999999999888877766532 22222334444455554 5555577


Q ss_pred             HHHhhccccccccc
Q 017782          196 AQGLQRTSAGLGSA  209 (366)
Q Consensus       196 ~~al~~~~~~~a~~  209 (366)
                      .+...+..++.+..
T Consensus        82 ~~~vp~lG~~~~~~   95 (138)
T PF04657_consen   82 IILVPRLGAALTTI   95 (138)
T ss_pred             HHHhhhhhHHHHHH
Confidence            77777777766554

>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function

Probab=85.90  E-value=2.5  Score=33.17  Aligned_cols=48  Identities=25%  Similarity=0.278  Sum_probs=34.0

Q ss_pred             CChhhHHHhhhh-HHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhc
Q 017782          314 GSLTKLSSLTFL-TPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN  361 (366)
Q Consensus       314 ~~a~~~s~~~~l-~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~  361 (366)
                      .++.+.-+++-. ..++-+.++.++++|++++..+.|.++++++++++-
T Consensus        59 ~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~fiF  107 (108)
T PF04342_consen   59 FSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYFIF  107 (108)
T ss_pred             cCHHHHHHHHHHHhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhheee
Confidence            344444443332 333445678889999999999999999999988754

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=84.13  E-value=3.6  Score=37.21  Aligned_cols=130  Identities=8%  Similarity=-0.030  Sum_probs=88.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhc-CCC-----------hHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHH
Q 017782          226 WMLLAAQSMAVGTVMVRWVSK-YSD-----------PVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALL  293 (366)
Q Consensus       226 ~allaa~~~a~~~v~~r~~~~-~~~-----------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll  293 (366)
                      ++.+--+||=+|-+...|+.+ ++.           ....+++++....+..=++..+.....      .-+...|.+..
T Consensus        17 ca~GifvCYF~yGI~QEkitrGkYg~~g~~~E~FTfalaLVf~qC~~N~vfAkvl~~ir~~~~------~D~t~~~~YaA   90 (337)
T KOG1580|consen   17 CAGGIFVCYFVYGIQQEKITRGKYGLPGESIEKFTFALALVFFQCTANTVFAKVLFLIRKKTE------IDNTPTKMYAA   90 (337)
T ss_pred             EecchhheehhhhhHHHHhhccccCCCCcchheehHHHHHHHHHHHHHHHHHHhheeeccccc------ccCCcchHHHH
Confidence            344445688888888887643 222           345556666666665544433332211      11122333332


Q ss_pred             HHHHHHHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhccc
Q 017782          294 YTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFR  363 (366)
Q Consensus       294 ~~gv~~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~  363 (366)
                       .+ ....++...-+.|+++++=-..-+--.-.|+=.+++|+++.+..-+|..+.-..+|++|+.+...+
T Consensus        91 -cs-~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK  158 (337)
T KOG1580|consen   91 -CS-ASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYK  158 (337)
T ss_pred             -HH-HHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhcc
Confidence             22 456667888899999998766666777889999999999999999999999999999999987765

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=82.61  E-value=4  Score=37.61  Aligned_cols=127  Identities=15%  Similarity=-0.038  Sum_probs=74.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHH
Q 017782          223 GEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAI  302 (366)
Q Consensus       223 G~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l  302 (366)
                      |.+.+++++++|+.+.+=.|+.. ..|++..-++.+....++.+++.++.+.+.+       .+  | .++  |-.--..
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~-~gDg~~fQw~~~~~i~~~g~~v~~~~~~p~f-------~p--~-aml--gG~lW~~   67 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFD-TGDGFFFQWVMCSGIFLVGLVVNLILGFPPF-------YP--W-AML--GGALWAT   67 (254)
T ss_pred             CchhHHHHHHHhcccceeeEecc-CCCcHHHHHHHHHHHHHHHHHHHHhcCCCcc-------ee--H-HHh--hhhhhhc
Confidence            56778999999999999999985 4577666666666655666666665554432       11  1 111  1111222


Q ss_pred             HHHHHHHHhccCChhhHHHhhhh-HHHHHHHHHHH-HhCCCC-----ChhHHHHHHHHHHHHHHhcc
Q 017782          303 SYGVYFYSATKGSLTKLSSLTFL-TPMFASIFGFL-YLGETF-----SPLQLVGAAVTVVAIYLVNF  362 (366)
Q Consensus       303 ~~~l~~~al~~~~a~~~s~~~~l-~Pv~a~i~~~l-~lgE~~-----~~~~~vG~~lIl~g~~l~~~  362 (366)
                      +..+-.-.+|.++.+..-.+-.. .-+.+-..+-+ +||++.     .+..++|.+++++|..+...
T Consensus        68 gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~f  134 (254)
T PF07857_consen   68 GNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSF  134 (254)
T ss_pred             CceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheee
Confidence            44444555555555544443333 33444444432 344432     45689999999999887654

The region concerned is approximately 280 residues long.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	366
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.96
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.8

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.96  E-value=1.1e-09  Score=89.89  Aligned_cols=71  Identities=8%  Similarity=0.165  Sum_probs=54.9

Q ss_pred             HHHHHHHHHHHHHHHHHhccCChhhHHHh-hhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782          294 YTSIFGSAISYGVYFYSATKGSLTKLSSL-TFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG  364 (366)
Q Consensus       294 ~~gv~~~~l~~~l~~~al~~~~a~~~s~~-~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~  364 (366)
                      .+++++++++++++++++|+.+++++.++ .++.|+++++++++++||++++.+++|.++|++|++++.+.+
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            35677889999999999999999999999 899999999999999999999999999999999999987644

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.80  E-value=2.5e-08  Score=78.91  Aligned_cols=70  Identities=9%  Similarity=0.173  Sum_probs=65.3

Q ss_pred             HHHHHHHHHHHHHHHHhccCChhhHHHh-hhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782          295 TSIFGSAISYGVYFYSATKGSLTKLSSL-TFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG  364 (366)
Q Consensus       295 ~gv~~~~l~~~l~~~al~~~~a~~~s~~-~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~  364 (366)
                      .++++.+++++++.+++|+.+.+.+.++ ..+.|+++++++++++||++++.+++|.++|+.|++++...+
T Consensus        35 ~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            5667788899999999999999999998 899999999999999999999999999999999999988754

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00