Citrus Sinensis ID: 017801
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 365 | ||||||
| 224092328 | 479 | predicted protein [Populus trichocarpa] | 0.961 | 0.732 | 0.814 | 1e-159 | |
| 255551046 | 476 | conserved hypothetical protein [Ricinus | 0.953 | 0.731 | 0.829 | 1e-156 | |
| 224143013 | 448 | predicted protein [Populus trichocarpa] | 0.961 | 0.783 | 0.817 | 1e-156 | |
| 225430021 | 478 | PREDICTED: uncharacterized protein LOC10 | 0.961 | 0.734 | 0.819 | 1e-154 | |
| 356518316 | 477 | PREDICTED: uncharacterized protein LOC10 | 0.956 | 0.731 | 0.786 | 1e-151 | |
| 297821995 | 479 | hypothetical protein ARALYDRAFT_481426 [ | 0.956 | 0.728 | 0.791 | 1e-150 | |
| 30682879 | 476 | Sulfite exporter TauE/SafE family protei | 0.956 | 0.733 | 0.782 | 1e-149 | |
| 356510003 | 472 | PREDICTED: uncharacterized protein LOC10 | 0.945 | 0.730 | 0.780 | 1e-148 | |
| 358344801 | 470 | hypothetical protein MTR_042s0018 [Medic | 0.939 | 0.729 | 0.760 | 1e-144 | |
| 255549968 | 483 | conserved hypothetical protein [Ricinus | 0.961 | 0.726 | 0.771 | 1e-143 |
| >gi|224092328|ref|XP_002309560.1| predicted protein [Populus trichocarpa] gi|222855536|gb|EEE93083.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 286/351 (81%), Positives = 319/351 (90%)
Query: 14 CMIMGAAVSTVYYNLKLRHPTLDMPIIDYDLALLIQPMLMLGISIGVAFNVIFADWMVTV 73
CMIMGAA+STVYYNLKLRHPTLDMPIIDYDLALLIQPMLMLGISIGVAFNV+FADWMVTV
Sbjct: 128 CMIMGAAISTVYYNLKLRHPTLDMPIIDYDLALLIQPMLMLGISIGVAFNVVFADWMVTV 187
Query: 74 LLIVLFIGTSTKAFLKGVETWKRETILKKEAARCLGSNGAGAGEVEYKSLPSGPRSGPQK 133
LLI+LF+GTSTKAFLKGVETWK+ETI+K+EAA+ L S+GA AGEVEYK LP GP + PQK
Sbjct: 188 LLIILFLGTSTKAFLKGVETWKKETIMKREAAKRLESDGASAGEVEYKPLPGGPSNSPQK 247
Query: 134 DAMEPEVTILENINWKELGLLVFVWVAFLGLQIAKNHTASCSIVYWVLDLLQIPVSLVVS 193
E EV+ILEN+ WKELGLLVFVWVAFL LQI K T++CS YWVL+LLQIPVS+ VS
Sbjct: 248 ADKEEEVSILENVYWKELGLLVFVWVAFLVLQITKEGTSTCSTTYWVLNLLQIPVSVGVS 307
Query: 194 LYEAISLYKGRRVIASKGDDGKSFRVFQLVSYCAFGVLAGIVGGLLGLGGGFIMGPLFLE 253
+YEA+SLYKG R+IASKG +G +F + QLV YC FG+LAG+VGGLLGLGGGFIMGPLFLE
Sbjct: 308 MYEAVSLYKGHRIIASKGTEGTNFTILQLVIYCLFGILAGVVGGLLGLGGGFIMGPLFLE 367
Query: 254 LGVPPQVSSATATFAMTFSSSMSVVEYYLLKRFPVPYALYFVAVATIAAFVGQHVVRKLI 313
LG+PPQVSSATATFAMTFSSSMSVVEYYLLKRFPV YA+YFVAVAT AAF+GQH+VR+LI
Sbjct: 368 LGIPPQVSSATATFAMTFSSSMSVVEYYLLKRFPVSYAVYFVAVATFAAFIGQHIVRRLI 427
Query: 314 ILLGRASLIIFILAFMIFVSAISLGGVGISNMIGKFHRHEYMGFENLCKYD 364
I+ GRASLIIFILA IF+SAISLGGVG++NMIGK HRHEYMGFENLCKYD
Sbjct: 428 IVFGRASLIIFILASTIFISAISLGGVGVANMIGKIHRHEYMGFENLCKYD 478
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255551046|ref|XP_002516571.1| conserved hypothetical protein [Ricinus communis] gi|223544391|gb|EEF45912.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|224143013|ref|XP_002324818.1| predicted protein [Populus trichocarpa] gi|222866252|gb|EEF03383.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|225430021|ref|XP_002284175.1| PREDICTED: uncharacterized protein LOC100267889 [Vitis vinifera] gi|296081886|emb|CBI20891.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356518316|ref|XP_003527825.1| PREDICTED: uncharacterized protein LOC100810784 [Glycine max] | Back alignment and taxonomy information |
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| >gi|297821995|ref|XP_002878880.1| hypothetical protein ARALYDRAFT_481426 [Arabidopsis lyrata subsp. lyrata] gi|297324719|gb|EFH55139.1| hypothetical protein ARALYDRAFT_481426 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|30682879|ref|NP_850068.1| Sulfite exporter TauE/SafE family protein [Arabidopsis thaliana] gi|22531098|gb|AAM97053.1| unknown protein [Arabidopsis thaliana] gi|25083770|gb|AAN72117.1| unknown protein [Arabidopsis thaliana] gi|26450521|dbj|BAC42374.1| unknown protein [Arabidopsis thaliana] gi|28951043|gb|AAO63445.1| At2g25737 [Arabidopsis thaliana] gi|330252652|gb|AEC07746.1| Sulfite exporter TauE/SafE family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|356510003|ref|XP_003523730.1| PREDICTED: uncharacterized protein LOC100809318 [Glycine max] | Back alignment and taxonomy information |
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| >gi|358344801|ref|XP_003636475.1| hypothetical protein MTR_042s0018 [Medicago truncatula] gi|355502410|gb|AES83613.1| hypothetical protein MTR_042s0018 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|255549968|ref|XP_002516035.1| conserved hypothetical protein [Ricinus communis] gi|223544940|gb|EEF46455.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 365 | ||||||
| TAIR|locus:504956017 | 476 | AT2G25737 [Arabidopsis thalian | 0.956 | 0.733 | 0.734 | 5.6e-132 | |
| TAIR|locus:2040605 | 459 | AT2G36630 [Arabidopsis thalian | 0.526 | 0.418 | 0.463 | 9.4e-82 | |
| TAIR|locus:2200061 | 367 | AT1G11540 "AT1G11540" [Arabido | 0.468 | 0.465 | 0.324 | 1.9e-35 | |
| TAIR|locus:2127343 | 449 | AT4G21250 "AT4G21250" [Arabido | 0.917 | 0.746 | 0.282 | 5.1e-35 | |
| TAIR|locus:2195773 | 458 | AT1G61740 [Arabidopsis thalian | 0.476 | 0.379 | 0.282 | 4.5e-31 | |
| TAIR|locus:2127348 | 393 | AT4G21260 "AT4G21260" [Arabido | 0.263 | 0.244 | 0.343 | 3.7e-24 | |
| DICTYBASE|DDB_G0269644 | 549 | DDB_G0269644 [Dictyostelium di | 0.950 | 0.632 | 0.230 | 3.6e-23 |
| TAIR|locus:504956017 AT2G25737 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1294 (460.6 bits), Expect = 5.6e-132, P = 5.6e-132
Identities = 257/350 (73%), Positives = 286/350 (81%)
Query: 14 CMIMGAAVSTVYYNLKLRHPTLDMPIIDYDLALLIQPMLMLGISIGVAFNVIFADWMVTV 73
CMIMGA+VSTVYYNL+LRHPTLDMPIIDYDLALLIQPMLMLGISIGVAFNVIF DW+VTV
Sbjct: 126 CMIMGASVSTVYYNLRLRHPTLDMPIIDYDLALLIQPMLMLGISIGVAFNVIFPDWLVTV 185
Query: 74 LLIVLFIGTSTKAFLKGVETWKRETILKKEAARCLGSNGAGAGEVEYKSLPSGPRSGPQK 133
LLIVLF+GTSTKAFLKG ETW +ETI KKEAA+ L SNG EVEY LP+ P + P
Sbjct: 186 LLIVLFLGTSTKAFLKGSETWNKETIEKKEAAKRLESNGVSGTEVEYVPLPAAPSTNPGN 245
Query: 134 DAMEPEVTILENINWKELGLLVFVWVAFLGLQIAKNHTASCSIVYWVLDLLQIPVSLVVS 193
E EV+I+EN+ WKELGLLVFVW+ FL LQI+K + A+CS+ YWV++LLQIPV++ VS
Sbjct: 246 KKKE-EVSIIENVYWKELGLLVFVWIVFLALQISKQNLANCSVAYWVINLLQIPVAVGVS 304
Query: 194 LYEAISLYKGRRVIASKGDDGKSFRVFQLVSYCXXXXXXXXXXXXXXXXXXXXMGPLFLE 253
YEA++LY+GRR+IASKG +F V QLV YC MGPLFLE
Sbjct: 305 GYEAVALYQGRRIIASKGQGDSNFTVGQLVMYCTFGIIAGIVGGLLGLGGGFIMGPLFLE 364
Query: 254 LGVPPQVSSATATFAMTFSSSMSVVEYYLLKRFPVPYALYFVAVATIAAFVGQHVVRKLI 313
LGVPPQVSSATATFAMTFSSSMSVVEYYLLKRFPVPYALY V VATIAA+VGQHVVR+LI
Sbjct: 365 LGVPPQVSSATATFAMTFSSSMSVVEYYLLKRFPVPYALYLVGVATIAAWVGQHVVRRLI 424
Query: 314 ILLGRASLIIFILAFMIFVSAISLGGVGISNMIGKFHRHEYMGFENLCKY 363
+GRASLIIFILA MIF+SAISLGGVGI NMIGK RHEYMGFENLCKY
Sbjct: 425 AAIGRASLIIFILASMIFISAISLGGVGIVNMIGKIQRHEYMGFENLCKY 474
|
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| TAIR|locus:2040605 AT2G36630 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2200061 AT1G11540 "AT1G11540" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2127343 AT4G21250 "AT4G21250" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2195773 AT1G61740 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2127348 AT4G21260 "AT4G21260" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0269644 DDB_G0269644 [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 365 | |||
| pfam01925 | 236 | pfam01925, TauE, Sulfite exporter TauE/SafE | 6e-10 | |
| pfam01925 | 236 | pfam01925, TauE, Sulfite exporter TauE/SafE | 2e-08 | |
| COG0730 | 258 | COG0730, COG0730, Predicted permeases [General fun | 6e-08 | |
| COG0730 | 258 | COG0730, COG0730, Predicted permeases [General fun | 2e-06 |
| >gnl|CDD|216790 pfam01925, TauE, Sulfite exporter TauE/SafE | Back alignment and domain information |
|---|
Score = 58.7 bits (143), Expect = 6e-10
Identities = 26/108 (24%), Positives = 45/108 (41%)
Query: 225 YCAFGVLAGIVGGLLGLGGGFIMGPLFLELGVPPQVSSATATFAMTFSSSMSVVEYYLLK 284
G+LAG + GL G GGG I PL L L PP V+ T+ A+ +S + +
Sbjct: 1 LLLAGLLAGFLAGLAGFGGGLIAVPLLLLLLGPPHVAVGTSLLAVIATSLSGALAHRRRG 60
Query: 285 RFPVPYALYFVAVATIAAFVGQHVVRKLIILLGRASLIIFILAFMIFV 332
L + + A +G ++ L + + + +L + +
Sbjct: 61 NVDWRLLLRLLLGGLLGALLGALLLLLLPGAVLKLLFGVLLLLAALLM 108
|
This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81. Length = 236 |
| >gnl|CDD|216790 pfam01925, TauE, Sulfite exporter TauE/SafE | Back alignment and domain information |
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| >gnl|CDD|223802 COG0730, COG0730, Predicted permeases [General function prediction only] | Back alignment and domain information |
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| >gnl|CDD|223802 COG0730, COG0730, Predicted permeases [General function prediction only] | Back alignment and domain information |
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Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 365 | |||
| COG0730 | 258 | Predicted permeases [General function prediction o | 99.87 | |
| PRK10621 | 266 | hypothetical protein; Provisional | 99.87 | |
| PF01925 | 240 | TauE: Sulfite exporter TauE/SafE; InterPro: IPR002 | 99.83 | |
| PRK10621 | 266 | hypothetical protein; Provisional | 99.53 | |
| COG0730 | 258 | Predicted permeases [General function prediction o | 99.49 | |
| PF01925 | 240 | TauE: Sulfite exporter TauE/SafE; InterPro: IPR002 | 99.28 | |
| PRK11469 | 188 | hypothetical protein; Provisional | 83.26 |
| >COG0730 Predicted permeases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.7e-20 Score=176.81 Aligned_cols=202 Identities=22% Similarity=0.298 Sum_probs=171.7
Q ss_pred cccccchhhHHHHHHHHHHHHHHHhhhcCCCCCCCccchhHHHHHhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhh
Q 017801 4 RRIRLPPCLACMIMGAAVSTVYYNLKLRHPTLDMPIIDYDLALLIQPMLMLGISIGVAFNVIFADWMVTVLLIVLFIGTS 83 (365)
Q Consensus 4 ~~~~a~~lS~~~I~g~sl~~~~~~~~k~hP~~~~plId~~l~lil~P~~l~Ga~iGv~l~~~lP~~ll~~lf~v~L~~~~ 83 (365)
.+++|.+.|...+..+++.+...+.||+| +||+.+..+.+..++|+.+|+.+...+|+..+...+.+++++.+
T Consensus 42 ~~~~a~~t~l~~~~~~~~~~~~~~~k~~~-------v~~~~~~~l~~~~~~G~~lG~~l~~~~~~~~l~~~~~~~ll~~~ 114 (258)
T COG0730 42 PPAAALGTSLLAVLFTSLSSALAYLKRGN-------VDWKLALILLLGALIGAFLGALLALLLPAELLKLLFGLLLLLLA 114 (258)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHcCC-------ccHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 45789999999999999999999999988 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCcccccCCCCCCCCCCCCCCCchhhhhhcccchHHHHHHHHHHHHHHH
Q 017801 84 TKAFLKGVETWKRETILKKEAARCLGSNGAGAGEVEYKSLPSGPRSGPQKDAMEPEVTILENINWKELGLLVFVWVAFLG 163 (365)
Q Consensus 84 ~~~~~k~~~~~k~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 163 (365)
.+++.+.++ .++|.+ . + +..|+.
T Consensus 115 ~~~~~~~~~-~~~~~~-------------------------~-----------~------~~~~~~-------------- 137 (258)
T COG0730 115 LYMLLGPRL-AKAEDR-------------------------A-----------A------RLRPLL-------------- 137 (258)
T ss_pred HHHHHhccc-cccccc-------------------------c-----------c------ccCcch--------------
Confidence 999876432 000000 0 0 000111
Q ss_pred HHHhhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCccchhhHHHHHHHHHHHHHHHHhhhcccc
Q 017801 164 LQIAKNHTASCSIVYWVLDLLQIPVSLVVSLYEAISLYKGRRVIASKGDDGKSFRVFQLVSYCAFGVLAGIVGGLLGLGG 243 (365)
Q Consensus 164 ~~~~~~~~~~c~~~yw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~sgl~GiGG 243 (365)
.......|+++|+++|++|+||
T Consensus 138 ----------------------------------------------------------~~~~~~~g~~~G~~sG~~G~Gg 159 (258)
T COG0730 138 ----------------------------------------------------------FALALLIGFLAGFLSGLFGVGG 159 (258)
T ss_pred ----------------------------------------------------------hHHHHHHHHHHHHHHhcccCCc
Confidence 0123457899999999999999
Q ss_pred hhhHHHHHh-hcCCChHHHHHhHHHHHHHHHHHHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHHHHHHhHHHHhHHHH
Q 017801 244 GFIMGPLFL-ELGVPPQVSSATATFAMTFSSSMSVVEYYL-LKRFPVPYALYFVAVATIAAFVGQHVVRKLIILLGRASL 321 (365)
Q Consensus 244 G~i~vP~L~-~~g~~~~~A~ats~~~~~~~s~~~~~~~~~-~g~v~~~~~~~l~~~~~~ga~lGa~l~~~l~~~~lr~~~ 321 (365)
|...+|.+. ..+.|.+.+++||.+.+++++..+...|.. .|++||..+..+.+++++|+++|++++++++++.+|+.+
T Consensus 160 G~~~vp~l~~~~~~~~~~~~~ts~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~g~~~G~~lG~~l~~~~~~~~lr~~~ 239 (258)
T COG0730 160 GFGIVPALLLLLLLPLKLAVATSLAIILNTASNGAALYLFALGAVDWPLALLLAVGSILGAYLGARLARRLSPKVLRRLF 239 (258)
T ss_pred hHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 999999995 678999999999999999999999999999 799999998899999999999999999999999999988
Q ss_pred HHHHHH
Q 017801 322 IIFILA 327 (365)
Q Consensus 322 ~~~ll~ 327 (365)
..+++.
T Consensus 240 ~~~~~~ 245 (258)
T COG0730 240 ALVLLA 245 (258)
T ss_pred HHHHHH
Confidence 765443
|
|
| >PRK10621 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PF01925 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002781 This family is found in integral membrane proteins of prokaryotes which are uncharacterised | Back alignment and domain information |
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| >PRK10621 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >COG0730 Predicted permeases [General function prediction only] | Back alignment and domain information |
|---|
| >PF01925 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002781 This family is found in integral membrane proteins of prokaryotes which are uncharacterised | Back alignment and domain information |
|---|
| >PRK11469 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00