Citrus Sinensis ID: 017802

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-----
MKGETVVIITKFQLFNHINSLFFNLGSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCECEQFIGTQSGGMDQAISIMAKSGFAELIDFNPIRTTDVQLPAGGTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIKLGMKPQEAISKVKTLSDVEGLCVAFACKNGSSDPVFAVKEFLRKEPYTALDIEKITEEKLTSIFANSSSSLDVLNAAKQYKLHQRAAHVYSEAKRVHAFKDTVSSNLRLLCSEEDKLKKLGDLMNDSHHSCSVLYECSCPELEELVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQFILNLKEQFYQSRIDRGVINNNDLGLYVFASKPSSGAAKFKF
cccHHHHHHHccccEEEEEEccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccHHHHHHHHHcccccEEEEEEccccccccccccccEEEEEEEccccccHHcccccccHHHHHHHHHHHHHHHHHccccHHHHHHccccHHHHHHHHHHHHHccccccHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHccccccccccccccccEEEEEccccHHHHHHHHHHHHHHcccccccccccccccEEEEEccccccEEccc
ccHHHHHHHHcccccEEEEEccccccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccccHHHHHHEcccccEEEEEccccEccccccccccEEEEEEcccccccccccccHHcHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHccccccHHHHHHHHcccHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccEEEEEEcccccccEEEEEEEHHHHHHHHHHHHHHHHHHccccccccHHHHccEEEEEcccccEEEEEc
MKGETVVIITKFQLFNHINSLFfnlgsglssstafVCSSTVALMAAFGVEVPKKEIAQLTCECEQfigtqsggmDQAISIMAKSGfaelidfnpirttdvqlpaggTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIKLGMKPQEAISKVKTLSDVEGLCVAFAckngssdpvFAVKEFlrkepytaldiEKITEEKLTSIFANSSSSLDVLNAAKQYKLHQRAAHVYSEAKRVHAFKDTVSSNLRLLCSEEDKLKKLGdlmndshhscsvlyecscpelEELVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQFILNLKEQFYQSridrgvinnndlGLYVFaskpssgaakfkf
MKGETVVIITKFQLFNHINSLFFNLGSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCECEQFIGTQSGGMDQAISIMAKSGFAELIDFNPIRTTDVQLPAGGTFVVAHSLAESLKAITAasnynnrvVECRLTAIVLAIKLGMKPQEAISKVKTLSDVEGLCVAFackngssdpVFAVKEFLRKEPYTALDIEKITEEKLTSIFANSSSSLDVLNAAKQYKLHQRAAHVYSEAKRVHAFKDTVSSNLRLLCSEEDKLKKLGDLMNDSHHSCSVLYECSCPELEELVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQFILNLKEQFYQSRIDRGVINNNDLGLyvfaskpssgaakfkf
MKGETVVIITKFQLFNHInslffnlgsglsssTAFVCSSTVALMAAFGVEVPKKEIAQLTCECEQFIGTQSGGMDQAISIMAKSGFAELIDFNPIRTTDVQLPAGGTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIKLGMKPQEAISKVKTLSDVEGLCVAFACKNGSSDPVFAVKEFLRKEPYTALDIEKITEEKLTSIFANSSSSLDVLNAAKQYKLHQRAAHVYSEAKRVHAFKDTVSSNLRLLCSEEDKLKKLGDLMNDSHHSCSVLYECSCPELEELVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQFILNLKEQFYQSRIDRGVINNNDLGLYVFASKPSSGAAKFKF
****TVVIITKFQLFNHINSLFFNLGSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCECEQFIGTQSGGMDQAISIMAKSGFAELIDFNPIRTTDVQLPAGGTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIKLGMKPQEAISKVKTLSDVEGLCVAFACKNGSSDPVFAVKEFLRKEPYTALDIEKIT***********************YKLHQRAAHVYSEAKRVHAFKDTVSSNLRLLCSEEDKLKKLGDLMNDSHHSCSVLYECSCPELEELVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQFILNLKEQFYQSRIDRGVINNNDLGLYVFA************
MKGETVVIITKFQLFNHINSLFFNLGSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCECEQFIGTQSGGMDQAISIMAKSGFAELIDFNPIRTTDVQLPAGGTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIKLGMKPQ***S**KTLSDVEGLCVAFACKNGSSDPVFAVKEFLRKEPYTALDIEKITEEKLTSIFANSSSSLDVLNAAKQYKLHQRAAHVYSEAKRVHAFKDTVSSNLRLLCSEEDKLKKLGDLMNDSHHSCSVLYECSCPELEELVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQFILNLKEQFYQSRIDRGVINNNDLGLYVFASKPSSGAAKFKF
MKGETVVIITKFQLFNHINSLFFNLGSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCECEQFIGTQSGGMDQAISIMAKSGFAELIDFNPIRTTDVQLPAGGTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIKLGMKPQEAISKVKTLSDVEGLCVAFACKNGSSDPVFAVKEFLRKEPYTALDIEKITEEKLTSIFANSSSSLDVLNAAKQYKLHQRAAHVYSEAKRVHAFKDTVSSNLRLLCSEEDKLKKLGDLMNDSHHSCSVLYECSCPELEELVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQFILNLKEQFYQSRIDRGVINNNDLGLYVFASKP*********
MKGETVVIITKFQLFNHINSLFFNLGSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCECEQFIGTQSGGMDQAISIMAKSGFAELIDFNPIRTTDVQLPAGGTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIKLGMKPQEAISKVKTLSDVEGLCVAFACKNGSSDPVFAVKEFLRKEPYTALDIEKITEEKLTSIFANSSSSLDVLNAAKQYKLHQRAAHVYSEAKRVHAFKDTVSSNLRLLCSEEDKLKKLGDLMNDSHHSCSVLYECSCPELEELVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQFILNLKEQFYQSRIDRGVINNNDLGLYVFASKPSSGAAKFKF
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MKGETVVIITKFQLFNHINSLFFNLGSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCECEQFIGTQSGGMDQAISIMAKSGFAELIDFNPIRTTDVQLPAGGTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIKLGMKPQEAISKVKTLSDVEGLCVAFACKNGSSDPVFAVKEFLRKEPYTALDIEKITEEKLTSIFANSSSSLDVLNAAKQYKLHQRAAHVYSEAKRVHAFKDTVSSNLRLLCSEEDKLKKLGDLMNDSHHSCSVLYECSCPELEELVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQFILNLKEQFYQSRIDRGVINNNDLGLYVFASKPSSGAAKFKF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query365 2.2.26 [Sep-21-2011]
Q9SEE5496 Galactokinase OS=Arabidop yes no 0.920 0.677 0.735 1e-142
Q54DN6501 Galactokinase OS=Dictyost yes no 0.890 0.648 0.381 6e-61
Q5XIG6458 N-acetylgalactosamine kin yes no 0.824 0.657 0.404 7e-60
Q68FH4458 N-acetylgalactosamine kin yes no 0.830 0.661 0.392 6e-59
Q01415458 N-acetylgalactosamine kin yes no 0.810 0.646 0.408 1e-56
Q5R6J8458 N-acetylgalactosamine kin yes no 0.810 0.646 0.405 4e-56
P04385528 Galactokinase OS=Saccharo yes no 0.882 0.609 0.337 4e-39
P09608503 Galactokinase OS=Kluyvero yes no 0.873 0.634 0.328 2e-36
O42821504 Galactokinase OS=Candida N/A no 0.912 0.660 0.338 9e-35
P13045520 Protein GAL3 OS=Saccharom no no 0.868 0.609 0.316 2e-34
>sp|Q9SEE5|GALK1_ARATH Galactokinase OS=Arabidopsis thaliana GN=GAL1 PE=1 SV=2 Back     alignment and function desciption
 Score =  504 bits (1298), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 250/340 (73%), Positives = 292/340 (85%), Gaps = 4/340 (1%)

Query: 26  GSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCECEQFIGTQSGGMDQAISIMAKSG 85
           GSGLSSS AFVCS+T+A+MA FG    KKE+AQLTCECE+ IGTQSGGMDQAISIMAK+G
Sbjct: 161 GSGLSSSAAFVCSATIAIMAVFGHNFEKKELAQLTCECERHIGTQSGGMDQAISIMAKTG 220

Query: 86  FAELIDFNPIRTTDVQLPAGGTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIKL 145
           FAELIDFNP+R TDV+LP GG+FV+AHSLAES KA+TAA NYNNRVVECRL +I+L +KL
Sbjct: 221 FAELIDFNPVRATDVKLPDGGSFVIAHSLAESQKAVTAAKNYNNRVVECRLASIILGVKL 280

Query: 146 GMKPQEAISKVKTLSDVEGLCVAFACKNGSSDPVFAVKEFLRKEPYTALDIEKITEEKLT 205
           GM+P+EAISKVKTLSDVEGLCV+FA   GSSDP+ AVKE+L++EPYTA +IEKI EEKL 
Sbjct: 281 GMEPKEAISKVKTLSDVEGLCVSFAGDRGSSDPLLAVKEYLKEEPYTAEEIEKILEEKLP 340

Query: 206 SIFANSSSSLDVLNAAKQYKLHQRAAHVYSEAKRVHAFKDTVSSNLRLLCSEEDKLKKLG 265
           SI  N  +SL VLNAA  +KLHQRAAHVYSEA+RVH FKDTV+SNL    S+E+KLKKLG
Sbjct: 341 SIVNNDPTSLAVLNAATHFKLHQRAAHVYSEARRVHGFKDTVNSNL----SDEEKLKKLG 396

Query: 266 DLMNDSHHSCSVLYECSCPELEELVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQFI 325
           DLMN+SH+SCSVLYECSCPELEELV VC+ NGALGARLTGAGWGGC VALVKE   +QFI
Sbjct: 397 DLMNESHYSCSVLYECSCPELEELVQVCKENGALGARLTGAGWGGCAVALVKEFDVTQFI 456

Query: 326 LNLKEQFYQSRIDRGVINNNDLGLYVFASKPSSGAAKFKF 365
             +KE++Y+ R+++GV+   D+ LY+FASKPSSGAA F  
Sbjct: 457 PAVKEKYYKKRVEKGVVKKEDMELYLFASKPSSGAAIFNL 496
Sugar-1-kinase with a very high substrate specificity for the alpha-anomeric configuration of D-galacose (D-Gal). Converts also efficiently 2-deoxy-D-Gal to 2-deoxy-D-al-1-phosphate.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 6
>sp|Q54DN6|GALK_DICDI Galactokinase OS=Dictyostelium discoideum GN=galK PE=3 SV=1 Back     alignment and function description
>sp|Q5XIG6|GALK2_RAT N-acetylgalactosamine kinase OS=Rattus norvegicus GN=Galk2 PE=2 SV=1 Back     alignment and function description
>sp|Q68FH4|GALK2_MOUSE N-acetylgalactosamine kinase OS=Mus musculus GN=Galk2 PE=1 SV=1 Back     alignment and function description
>sp|Q01415|GALK2_HUMAN N-acetylgalactosamine kinase OS=Homo sapiens GN=GALK2 PE=1 SV=1 Back     alignment and function description
>sp|Q5R6J8|GALK2_PONAB N-acetylgalactosamine kinase OS=Pongo abelii GN=GALK2 PE=2 SV=1 Back     alignment and function description
>sp|P04385|GAL1_YEAST Galactokinase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GAL1 PE=1 SV=4 Back     alignment and function description
>sp|P09608|GAL1_KLULA Galactokinase OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=GAL1 PE=2 SV=2 Back     alignment and function description
>sp|O42821|GAL1_CANPA Galactokinase OS=Candida parapsilosis GN=GAL1 PE=3 SV=1 Back     alignment and function description
>sp|P13045|GAL3_YEAST Protein GAL3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GAL3 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query365
255556438 499 galactokinase, putative [Ricinus communi 0.920 0.673 0.802 1e-159
356565073 497 PREDICTED: galactokinase-like [Glycine m 0.920 0.676 0.808 1e-158
356521747 497 PREDICTED: galactokinase-like [Glycine m 0.920 0.676 0.805 1e-158
224108774 496 predicted protein [Populus trichocarpa] 0.920 0.677 0.805 1e-158
224101523 496 predicted protein [Populus trichocarpa] 0.920 0.677 0.8 1e-156
225432012 499 PREDICTED: galactokinase [Vitis vinifera 0.920 0.673 0.8 1e-154
84468320 496 putative galactose kinase [Trifolium pra 0.920 0.677 0.788 1e-154
357479039 497 Galactokinase [Medicago truncatula] gi|3 0.920 0.676 0.779 1e-153
209978716 500 galactokinase [Cucumis melo] 0.920 0.672 0.773 1e-152
449466203426 PREDICTED: galactokinase-like [Cucumis s 0.920 0.788 0.776 1e-152
>gi|255556438|ref|XP_002519253.1| galactokinase, putative [Ricinus communis] gi|223541568|gb|EEF43117.1| galactokinase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  566 bits (1459), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 273/340 (80%), Positives = 306/340 (90%), Gaps = 4/340 (1%)

Query: 26  GSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCECEQFIGTQSGGMDQAISIMAKSG 85
           GSGLSSS AFVCS+T+A+MAAF V  PKKEIAQLTCECE+ IGTQSGGMDQAIS+MA++G
Sbjct: 164 GSGLSSSAAFVCSATIAIMAAFNVNFPKKEIAQLTCECERHIGTQSGGMDQAISVMAQTG 223

Query: 86  FAELIDFNPIRTTDVQLPAGGTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIKL 145
           FAELIDFNPIR TDVQLPAGGTFV+AHSLAES KA+TAA+NYNNRVVECRL AI+L +KL
Sbjct: 224 FAELIDFNPIRATDVQLPAGGTFVIAHSLAESQKAVTAATNYNNRVVECRLAAILLGVKL 283

Query: 146 GMKPQEAISKVKTLSDVEGLCVAFACKNGSSDPVFAVKEFLRKEPYTALDIEKITEEKLT 205
           GMKPQ+AI KVKTLSDVEGLCV+FA    S+DP  AVKEFL++EPY+A +IEKITEE L+
Sbjct: 284 GMKPQDAILKVKTLSDVEGLCVSFAGTRDSADPAVAVKEFLKEEPYSAEEIEKITEEDLS 343

Query: 206 SIFANSSSSLDVLNAAKQYKLHQRAAHVYSEAKRVHAFKDTVSSNLRLLCSEEDKLKKLG 265
           SIF+NS +SLDVL AAK +KLHQRAAHVYSEAKRVHAFKDTVSS L    S+EDKLKKLG
Sbjct: 344 SIFSNSPTSLDVLKAAKHFKLHQRAAHVYSEAKRVHAFKDTVSSKL----SDEDKLKKLG 399

Query: 266 DLMNDSHHSCSVLYECSCPELEELVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQFI 325
           DLMN+SH+SCS+LYECSCPELEELV VCR +GALGARLTGAGWGGC VALVKE+I  QFI
Sbjct: 400 DLMNESHYSCSILYECSCPELEELVKVCREHGALGARLTGAGWGGCAVALVKEAIVPQFI 459

Query: 326 LNLKEQFYQSRIDRGVINNNDLGLYVFASKPSSGAAKFKF 365
           LNLKE+F+QSRID+GVI  +DLGLYVFASKPSSGAA FKF
Sbjct: 460 LNLKEKFFQSRIDKGVIKKSDLGLYVFASKPSSGAAIFKF 499

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356565073|ref|XP_003550769.1| PREDICTED: galactokinase-like [Glycine max] Back     alignment and taxonomy information
>gi|356521747|ref|XP_003529513.1| PREDICTED: galactokinase-like [Glycine max] Back     alignment and taxonomy information
>gi|224108774|ref|XP_002314964.1| predicted protein [Populus trichocarpa] gi|222864004|gb|EEF01135.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224101523|ref|XP_002312315.1| predicted protein [Populus trichocarpa] gi|222852135|gb|EEE89682.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225432012|ref|XP_002279647.1| PREDICTED: galactokinase [Vitis vinifera] gi|296083222|emb|CBI22858.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|84468320|dbj|BAE71243.1| putative galactose kinase [Trifolium pratense] Back     alignment and taxonomy information
>gi|357479039|ref|XP_003609805.1| Galactokinase [Medicago truncatula] gi|355510860|gb|AES92002.1| Galactokinase [Medicago truncatula] Back     alignment and taxonomy information
>gi|209978716|gb|ACJ04703.1| galactokinase [Cucumis melo] Back     alignment and taxonomy information
>gi|449466203|ref|XP_004150816.1| PREDICTED: galactokinase-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query365
TAIR|locus:2084344496 GALK [Arabidopsis thaliana (ta 0.893 0.657 0.736 1.1e-128
DICTYBASE|DDB_G0292112501 galK "galactokinase" [Dictyost 0.865 0.630 0.385 2.9e-55
FB|FBgn0263199490 Galk "Galactokinase" [Drosophi 0.843 0.628 0.385 1.8e-46
ASPGD|ASPL0000078082524 galE [Emericella nidulans (tax 0.876 0.610 0.339 2.9e-39
SGD|S000000224528 GAL1 "Galactokinase" [Saccharo 0.369 0.255 0.402 4.6e-37
SGD|S000002416520 GAL3 "Transcriptional regulato 0.369 0.259 0.395 1.1e-32
UNIPROTKB|E1C902398 GALK2 "Uncharacterized protein 0.460 0.422 0.429 5.4e-31
UNIPROTKB|F1P1D1461 GALK2 "Uncharacterized protein 0.460 0.364 0.429 5.4e-31
UNIPROTKB|F1MFK7447 GALK2 "Uncharacterized protein 0.586 0.478 0.385 3.8e-30
RGD|1308691458 Galk2 "galactokinase 2" [Rattu 0.460 0.366 0.415 6.2e-30
TAIR|locus:2084344 GALK [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1263 (449.7 bits), Expect = 1.1e-128, P = 1.1e-128
 Identities = 243/330 (73%), Positives = 285/330 (86%)

Query:    34 AFVCSSTVALMAAFGVEVPKKEIAQLTCECEQFIGTQSGGMDQAISIMAKSGFAELIDFN 93
             AFVCS+T+A+MA FG    KKE+AQLTCECE+ IGTQSGGMDQAISIMAK+GFAELIDFN
Sbjct:   169 AFVCSATIAIMAVFGHNFEKKELAQLTCECERHIGTQSGGMDQAISIMAKTGFAELIDFN 228

Query:    94 PIRTTDVQLPAGGTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIKLGMKPQEAI 153
             P+R TDV+LP GG+FV+AHSLAES KA+TAA NYNNRVVECRL +I+L +KLGM+P+EAI
Sbjct:   229 PVRATDVKLPDGGSFVIAHSLAESQKAVTAAKNYNNRVVECRLASIILGVKLGMEPKEAI 288

Query:   154 SKVKTLSDVEGLCVAFACKNGSSDPVFAVKEFLRKEPYTALDIEKITEEKLTSIFANSSS 213
             SKVKTLSDVEGLCV+FA   GSSDP+ AVKE+L++EPYTA +IEKI EEKL SI  N  +
Sbjct:   289 SKVKTLSDVEGLCVSFAGDRGSSDPLLAVKEYLKEEPYTAEEIEKILEEKLPSIVNNDPT 348

Query:   214 SLDVLNAAKQYKLHQRAAHVYSEAKRVHAFKDTVSSNLRLLCSEEDKLKKLGDLMNDSHH 273
             SL VLNAA  +KLHQRAAHVYSEA+RVH FKDTV+SNL    S+E+KLKKLGDLMN+SH+
Sbjct:   349 SLAVLNAATHFKLHQRAAHVYSEARRVHGFKDTVNSNL----SDEEKLKKLGDLMNESHY 404

Query:   274 SCSVLYECSCPELEELVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQFILNLKEQFY 333
             SCSVLYECSCPELEELV VC+ NGALGARLTGAGWGGC VALVKE   +QFI  +KE++Y
Sbjct:   405 SCSVLYECSCPELEELVQVCKENGALGARLTGAGWGGCAVALVKEFDVTQFIPAVKEKYY 464

Query:   334 QSRIDRGVINNNDLGLYVFASKPSSGAAKF 363
             + R+++GV+   D+ LY+FASKPSSGAA F
Sbjct:   465 KKRVEKGVVKKEDMELYLFASKPSSGAAIF 494
GO:0004335 "galactokinase activity" evidence=IEA;IGI;ISS;IDA
GO:0005524 "ATP binding" evidence=IEA;ISS
GO:0005737 "cytoplasm" evidence=ISM;IEA
GO:0006012 "galactose metabolic process" evidence=IEA;IDA
GO:0008152 "metabolic process" evidence=IEA
GO:0016301 "kinase activity" evidence=IEA
GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=IEA
GO:0046835 "carbohydrate phosphorylation" evidence=IEA;IDA
GO:0005829 "cytosol" evidence=IDA
DICTYBASE|DDB_G0292112 galK "galactokinase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
FB|FBgn0263199 Galk "Galactokinase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
ASPGD|ASPL0000078082 galE [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
SGD|S000000224 GAL1 "Galactokinase" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
SGD|S000002416 GAL3 "Transcriptional regulator" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
UNIPROTKB|E1C902 GALK2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1P1D1 GALK2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1MFK7 GALK2 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
RGD|1308691 Galk2 "galactokinase 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9SEE5GALK1_ARATH2, ., 7, ., 1, ., 60.73520.92050.6774yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.7.1.60.946
3rd Layer2.7.10.963

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query365
PLN02521497 PLN02521, PLN02521, galactokinase 0.0
COG0153390 COG0153, GalK, Galactokinase [Carbohydrate transpo 9e-50
TIGR00131386 TIGR00131, gal_kin, galactokinase 3e-42
PRK05322387 PRK05322, PRK05322, galactokinase; Provisional 4e-25
PRK05101382 PRK05101, PRK05101, galactokinase; Provisional 5e-18
PRK03817351 PRK03817, PRK03817, galactokinase; Provisional 2e-16
PLN02865423 PLN02865, PLN02865, galactokinase 1e-14
COG1577307 COG1577, ERG12, Mevalonate kinase [Lipid metabolis 4e-13
PTZ00298328 PTZ00298, PTZ00298, mevalonate kinase; Provisional 1e-12
TIGR00549274 TIGR00549, mevalon_kin, mevalonate kinase 2e-12
PRK00555363 PRK00555, PRK00555, galactokinase; Provisional 6e-12
pfam0854486 pfam08544, GHMP_kinases_C, GHMP kinases C terminal 9e-12
PRK03817351 PRK03817, PRK03817, galactokinase; Provisional 4e-11
pfam0028867 pfam00288, GHMP_kinases_N, GHMP kinases N terminal 3e-10
PRK03926302 PRK03926, PRK03926, mevalonate kinase; Provisional 9e-10
PRK00555363 PRK00555, PRK00555, galactokinase; Provisional 1e-08
PTZ00290468 PTZ00290, PTZ00290, galactokinase; Provisional 1e-08
TIGR00549274 TIGR00549, mevalon_kin, mevalonate kinase 7e-05
COG1577307 COG1577, ERG12, Mevalonate kinase [Lipid metabolis 1e-04
>gnl|CDD|215285 PLN02521, PLN02521, galactokinase Back     alignment and domain information 
 Score =  625 bits (1613), Expect = 0.0
 Identities = 259/340 (76%), Positives = 293/340 (86%), Gaps = 4/340 (1%)

Query: 26  GSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCECEQFIGTQSGGMDQAISIMAKSG 85
           GSGLSSS A VCS+ +A+MAA G+   KKE+AQ TC+CE+ IGTQSGGMDQAISIMA+ G
Sbjct: 161 GSGLSSSAALVCSAAIAIMAALGLNFTKKEVAQFTCKCERHIGTQSGGMDQAISIMAQQG 220

Query: 86  FAELIDFNPIRTTDVQLPAGGTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIKL 145
            A+LIDFNP+R TDVQLPAGGTFV+A+SLAES KA+TAA+NYNNRVVECRL AIVLA+KL
Sbjct: 221 VAKLIDFNPVRATDVQLPAGGTFVIANSLAESNKAVTAATNYNNRVVECRLAAIVLAVKL 280

Query: 146 GMKPQEAISKVKTLSDVEGLCVAFACKNGSSDPVFAVKEFLRKEPYTALDIEKITEEKLT 205
           GM  +EAISKVKTLSDVEGLCV+FA  +GSSDP  AVKE L + PYTA +IE+I  E LT
Sbjct: 281 GMSAEEAISKVKTLSDVEGLCVSFAGSHGSSDPAVAVKELLHEGPYTAEEIEEILGESLT 340

Query: 206 SIFANSSSSLDVLNAAKQYKLHQRAAHVYSEAKRVHAFKDTVSSNLRLLCSEEDKLKKLG 265
           SIF NS +SL VL AAK +KLHQRA HVYSEAKRVHAF+DTVSS+L    SEE+KLKKLG
Sbjct: 341 SIFKNSPTSLAVLKAAKHFKLHQRAVHVYSEAKRVHAFRDTVSSSL----SEEEKLKKLG 396

Query: 266 DLMNDSHHSCSVLYECSCPELEELVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQFI 325
           DLMN+SH+SCSVLYECSCPELEELV VCR+NGALGARLTGAGWGGC VALVKE+I  QFI
Sbjct: 397 DLMNESHYSCSVLYECSCPELEELVKVCRDNGALGARLTGAGWGGCAVALVKEAIVPQFI 456

Query: 326 LNLKEQFYQSRIDRGVINNNDLGLYVFASKPSSGAAKFKF 365
           L LKE+FY+SRI++GVI   DLGLYVFASKPSSGAA  KF
Sbjct: 457 LALKEKFYKSRIEKGVIKEEDLGLYVFASKPSSGAAILKF 496

Length = 497
>gnl|CDD|223231 COG0153, GalK, Galactokinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|232841 TIGR00131, gal_kin, galactokinase Back     alignment and domain information
>gnl|CDD|235407 PRK05322, PRK05322, galactokinase; Provisional Back     alignment and domain information
>gnl|CDD|179937 PRK05101, PRK05101, galactokinase; Provisional Back     alignment and domain information
>gnl|CDD|235163 PRK03817, PRK03817, galactokinase; Provisional Back     alignment and domain information
>gnl|CDD|215466 PLN02865, PLN02865, galactokinase Back     alignment and domain information
>gnl|CDD|224493 COG1577, ERG12, Mevalonate kinase [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|240351 PTZ00298, PTZ00298, mevalonate kinase; Provisional Back     alignment and domain information
>gnl|CDD|233017 TIGR00549, mevalon_kin, mevalonate kinase Back     alignment and domain information
>gnl|CDD|179063 PRK00555, PRK00555, galactokinase; Provisional Back     alignment and domain information
>gnl|CDD|219894 pfam08544, GHMP_kinases_C, GHMP kinases C terminal Back     alignment and domain information
>gnl|CDD|235163 PRK03817, PRK03817, galactokinase; Provisional Back     alignment and domain information
>gnl|CDD|215839 pfam00288, GHMP_kinases_N, GHMP kinases N terminal domain Back     alignment and domain information
>gnl|CDD|179677 PRK03926, PRK03926, mevalonate kinase; Provisional Back     alignment and domain information
>gnl|CDD|179063 PRK00555, PRK00555, galactokinase; Provisional Back     alignment and domain information
>gnl|CDD|240347 PTZ00290, PTZ00290, galactokinase; Provisional Back     alignment and domain information
>gnl|CDD|233017 TIGR00549, mevalon_kin, mevalonate kinase Back     alignment and domain information
>gnl|CDD|224493 COG1577, ERG12, Mevalonate kinase [Lipid metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 365
PLN02521497 galactokinase 100.0
COG0153390 GalK Galactokinase [Carbohydrate transport and met 100.0
PLN02865423 galactokinase 100.0
PTZ00290468 galactokinase; Provisional 100.0
PRK05322387 galactokinase; Provisional 100.0
PRK05101382 galactokinase; Provisional 100.0
PRK00555363 galactokinase; Provisional 100.0
TIGR00131386 gal_kin galactokinase. The galactokinases found by 100.0
KOG0631489 consensus Galactokinase [Carbohydrate transport an 100.0
PRK03817351 galactokinase; Provisional 100.0
PLN02677387 mevalonate kinase 100.0
COG1577307 ERG12 Mevalonate kinase [Lipid metabolism] 100.0
PTZ00298328 mevalonate kinase; Provisional 100.0
COG2605333 Predicted kinase related to galactokinase and meva 100.0
TIGR00549273 mevalon_kin mevalonate kinase. Paracoccus exhibits 99.97
TIGR01220358 Pmev_kin_Gr_pos phosphomevalonate kinase, ERG8-typ 99.97
PRK03926302 mevalonate kinase; Provisional 99.97
KOG1511397 consensus Mevalonate kinase MVK/ERG12 [Lipid trans 99.97
PRK13412974 fkp bifunctional fucokinase/L-fucose-1-P-guanylylt 99.97
PLN02451370 homoserine kinase 99.93
COG0083299 ThrB Homoserine kinase [Amino acid transport and m 99.92
PRK01212301 homoserine kinase; Provisional 99.92
TIGR00191302 thrB homoserine kinase. P.aeruginosa homoserine ki 99.89
PTZ00299336 homoserine kinase; Provisional 99.87
TIGR01920261 Shik_kin_archae shikimate kinase. This model repre 99.87
PRK03188300 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.87
TIGR01219454 Pmev_kin_ERG8 phosphomevalonate kinase, ERG8-type, 99.87
PRK02534312 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.86
PRK01123282 shikimate kinase; Provisional 99.86
PRK00128286 ipk 4-diphosphocytidyl-2-C-methyl-D-erythritol kin 99.86
TIGR00144324 beta_RFAP_syn beta-RFAP synthase. This protein fam 99.84
TIGR00154293 ispE 4-diphosphocytidyl-2C-methyl-D-erythritol kin 99.8
COG1907312 Predicted archaeal sugar kinases [General function 99.8
PRK14614280 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.77
PRK14616287 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.76
PRK14608290 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.75
PRK14615296 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.73
PRK14612276 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.73
PRK14611275 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.73
PRK14613297 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.73
PRK14609269 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.71
PRK00343271 ipk 4-diphosphocytidyl-2-C-methyl-D-erythritol kin 99.56
PRK00650288 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.55
PF0028867 GHMP_kinases_N: GHMP kinases N terminal domain; In 99.55
TIGR01240305 mevDPdecarb diphosphomevalonate decarboxylase. Alt 99.52
COG1947289 IspE 4-diphosphocytidyl-2C-methyl-D-erythritol 2-p 99.5
COG1685278 Archaeal shikimate kinase [Amino acid transport an 99.49
PF0854485 GHMP_kinases_C: GHMP kinases C terminal ; InterPro 99.48
PRK14610283 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.48
PRK05905258 hypothetical protein; Provisional 99.29
KOG4644948 consensus L-fucose kinase [Carbohydrate transport 99.27
KOG1537355 consensus Homoserine kinase [Amino acid transport 99.07
COG4542293 PduX Protein involved in propanediol utilization, 99.05
PRK04181257 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 98.99
PLN02407343 diphosphomevalonate decarboxylase 98.97
COG3890337 ERG8 Phosphomevalonate kinase [Lipid metabolism] 98.88
COG3407329 MVD1 Mevalonate pyrophosphate decarboxylase [Lipid 98.74
KOG2833395 consensus Mevalonate pyrophosphate decarboxylase [ 98.65
COG1829283 Predicted archaeal kinase (sugar kinase superfamil 98.64
KOG4519459 consensus Phosphomevalonate kinase [Lipid transpor 98.41
>PLN02521 galactokinase Back     alignment and domain information 
Probab=100.00  E-value=1e-60  Score=480.96  Aligned_cols=349  Identities=74%  Similarity=1.118  Sum_probs=306.5

Q ss_pred             CceEEEEEecCCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhhhCCCCCchhHHHHHhhcCCeEEEeec
Q 017802           13 QLFNHINSLFFNLGSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCECEQFIGTQSGGMDQAISIMAKSGFAELIDF   92 (365)
Q Consensus        13 ~g~~i~i~s~iP~g~GLGSSaAl~va~~~al~~~~~~~l~~~el~~la~~~E~~~g~~~G~~D~~~~~~Gg~~~~~~i~~   92 (365)
                      .||++.|.|+||+++|||||||+++|++.+++.+++.++++++++++|+++|+++|.++|+|||+++++|+.|+++++||
T Consensus       148 ~g~~i~i~s~IP~gsGLgSSAA~~vA~~~al~~~~~~~l~~~~la~la~~~E~~~g~~~g~mDq~as~~g~~g~al~~d~  227 (497)
T PLN02521        148 VGLDVVVDGTVPTGSGLSSSAALVCSAAIAIMAALGLNFTKKEVAQFTCKCERHIGTQSGGMDQAISIMAQQGVAKLIDF  227 (497)
T ss_pred             CCeEEEEecCCCCCCCcchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhCccCCCCChHHHHHHHhcCCCcEEEEec
Confidence            49999999999999999999999999999999999999999999999999999889999999999999999999999999


Q ss_pred             CCCceEeeecCCCcEEEEEecCCcchhhhhcccchhhHHHHHHHHHHHHHHHhCCCchhhhhccccchhhhhhhhhhhcC
Q 017802           93 NPIRTTDVQLPAGGTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIKLGMKPQEAISKVKTLSDVEGLCVAFACK  172 (365)
Q Consensus        93 ~~~~~~~~~~p~~~~~vli~s~~~~~k~~~~~~~y~~r~~e~~~a~~~l~~~~~~~~~~~~~~~~~L~~v~~~~~~~~~~  172 (365)
                      +++.++++|+|.++.|++++|++++.|+.++++.||.|++||+.|+++|+++.+++++....++++|||+.+++-.+.+.
T Consensus       228 ~~l~~~~v~~p~~~~~vv~~s~v~~~k~~~a~~~Yn~R~~ec~~Aa~~L~~~~~~~~~~~~~~~~~Lrd~~~~~~~~~~~  307 (497)
T PLN02521        228 NPVRATDVQLPAGGTFVIANSLAESNKAVTAATNYNNRVVECRLAAIVLAVKLGMSAEEAISKVKTLSDVEGLCVSFAGS  307 (497)
T ss_pred             CCCceEEeecCCCcEEEEEECCCcccccccccccccHHHHHHHHHHHHHHhhcCCcchhcccccCCHHHHHHHHhhhccc
Confidence            99999999999899999999999999999999999999999999999999988876432122367899997654334455


Q ss_pred             CCCCChhHHHHHhhhcCCCCHHHHHHHHhhhhhhhhhcCCCchhHHhhhhhHHHHHHHhHHHHHhhhHHHHHHHHhcccc
Q 017802          173 NGSSDPVFAVKEFLRKEPYTALDIEKITEEKLTSIFANSSSSLDVLNAAKQYKLHQRAAHVYSEAKRVHAFKDTVSSNLR  252 (365)
Q Consensus       173 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~E~~rv~~~~~al~~~d~  252 (365)
                      ....++.+.+++.+.+.+|++++++++++..+++++++.++..+.+...+.+.+++|+.|+++|+.||.+++++|++++ 
T Consensus       308 ~~~~~~~~~~~~~l~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Ra~Hvv~E~~RV~~~~~al~~~~-  386 (497)
T PLN02521        308 HGSSDPAVAVKELLHEGPYTAEEIEEILGESLTSIFKNSPTSLAVLKAAKHFKLHQRAVHVYSEAKRVHAFRDTVSSSL-  386 (497)
T ss_pred             ccchhhHHHhhhhhccccCCHHHHHHHhCCcHHHHhhccccccccccccchhHHhhhhhheecHHHHHHHHHHHHHhcC-
Confidence            5556678888999999999999999887755666665555555555556678899999999999999999999999864 


Q ss_pred             cccchHHHHHHHHHHHHHHHHHhhhhcCCCChHHHHHHHHHHhCCCcEEEEccccCcceEEEEEcCCcHHHHHHHHHHHH
Q 017802          253 LLCSEEDKLKKLGDLMNDSHHSCSVLYECSCPELEELVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQFILNLKEQF  332 (365)
Q Consensus       253 ~~~~~~~~~~~lg~lm~~sh~~lr~~~~~s~peld~lv~~a~~~Ga~GakisGaG~GG~vi~L~~~~~~~~~~~~l~~~y  332 (365)
                         ..+.++..||++|++||.++|++|++|||++|.|++++++.|++||||||||||||+++|++++..+++++.+.+.|
T Consensus       387 ---~~~~~~~~lg~lm~~sh~slr~~~~vS~~elD~lv~~a~~~Ga~GaRltGaG~GG~~i~lv~~~~~~~~~~~l~~~y  463 (497)
T PLN02521        387 ---SEEEKLKKLGDLMNESHYSCSVLYECSCPELEELVKVCRDNGALGARLTGAGWGGCAVALVKEAIVPQFILALKEKF  463 (497)
T ss_pred             ---ccchHHHHHHHHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCCcEEEECCCCCCeEEEEEECHHHHHHHHHHHHHHH
Confidence               22345999999999999999999999999999999999999999999999999999999999988999999999999


Q ss_pred             HhcccCCCcccCCCCcceEEEeeCCCceeeccC
Q 017802          333 YQSRIDRGVINNNDLGLYVFASKPSSGAAKFKF  365 (365)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~~p~~Ga~v~~~  365 (365)
                      +++.+.++.+++.++.+.+|+++|++||++++|
T Consensus       464 ~~~~~~~~~~~~~~~~~~~~~~~p~~Ga~~~~~  496 (497)
T PLN02521        464 YKSRIEKGVIKEEDLGLYVFASKPSSGAAILKF  496 (497)
T ss_pred             HhhccccccccccCCCCcEEEEecCCCceEeec
Confidence            987653445666678899999999999999875

>COG0153 GalK Galactokinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02865 galactokinase Back     alignment and domain information
>PTZ00290 galactokinase; Provisional Back     alignment and domain information
>PRK05322 galactokinase; Provisional Back     alignment and domain information
>PRK05101 galactokinase; Provisional Back     alignment and domain information
>PRK00555 galactokinase; Provisional Back     alignment and domain information
>TIGR00131 gal_kin galactokinase Back     alignment and domain information
>KOG0631 consensus Galactokinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK03817 galactokinase; Provisional Back     alignment and domain information
>PLN02677 mevalonate kinase Back     alignment and domain information
>COG1577 ERG12 Mevalonate kinase [Lipid metabolism] Back     alignment and domain information
>PTZ00298 mevalonate kinase; Provisional Back     alignment and domain information
>COG2605 Predicted kinase related to galactokinase and mevalonate kinase [General function prediction only] Back     alignment and domain information
>TIGR00549 mevalon_kin mevalonate kinase Back     alignment and domain information
>TIGR01220 Pmev_kin_Gr_pos phosphomevalonate kinase, ERG8-type, Gram-positive branch Back     alignment and domain information
>PRK03926 mevalonate kinase; Provisional Back     alignment and domain information
>KOG1511 consensus Mevalonate kinase MVK/ERG12 [Lipid transport and metabolism] Back     alignment and domain information
>PRK13412 fkp bifunctional fucokinase/L-fucose-1-P-guanylyltransferase; Provisional Back     alignment and domain information
>PLN02451 homoserine kinase Back     alignment and domain information
>COG0083 ThrB Homoserine kinase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK01212 homoserine kinase; Provisional Back     alignment and domain information
>TIGR00191 thrB homoserine kinase Back     alignment and domain information
>PTZ00299 homoserine kinase; Provisional Back     alignment and domain information
>TIGR01920 Shik_kin_archae shikimate kinase Back     alignment and domain information
>PRK03188 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>TIGR01219 Pmev_kin_ERG8 phosphomevalonate kinase, ERG8-type, eukaryotic branch Back     alignment and domain information
>PRK02534 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK01123 shikimate kinase; Provisional Back     alignment and domain information
>PRK00128 ipk 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>TIGR00144 beta_RFAP_syn beta-RFAP synthase Back     alignment and domain information
>TIGR00154 ispE 4-diphosphocytidyl-2C-methyl-D-erythritol kinase Back     alignment and domain information
>COG1907 Predicted archaeal sugar kinases [General function prediction only] Back     alignment and domain information
>PRK14614 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK14616 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK14608 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK14615 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK14612 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK14611 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK14613 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK14609 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK00343 ipk 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK00650 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PF00288 GHMP_kinases_N: GHMP kinases N terminal domain; InterPro: IPR006204 The galacto- (2 Back     alignment and domain information
>TIGR01240 mevDPdecarb diphosphomevalonate decarboxylase Back     alignment and domain information
>COG1947 IspE 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase [Lipid metabolism] Back     alignment and domain information
>COG1685 Archaeal shikimate kinase [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>PF08544 GHMP_kinases_C: GHMP kinases C terminal ; InterPro: IPR013750 This domain is found in homoserine kinases (2 Back     alignment and domain information
>PRK14610 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK05905 hypothetical protein; Provisional Back     alignment and domain information
>KOG4644 consensus L-fucose kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG1537 consensus Homoserine kinase [Amino acid transport and metabolism] Back     alignment and domain information
>COG4542 PduX Protein involved in propanediol utilization, and related proteins (includes coumermycin biosynthetic protein), possible kinase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK04181 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PLN02407 diphosphomevalonate decarboxylase Back     alignment and domain information
>COG3890 ERG8 Phosphomevalonate kinase [Lipid metabolism] Back     alignment and domain information
>COG3407 MVD1 Mevalonate pyrophosphate decarboxylase [Lipid metabolism] Back     alignment and domain information
>KOG2833 consensus Mevalonate pyrophosphate decarboxylase [Lipid transport and metabolism] Back     alignment and domain information
>COG1829 Predicted archaeal kinase (sugar kinase superfamily) [General function prediction only] Back     alignment and domain information
>KOG4519 consensus Phosphomevalonate kinase [Lipid transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query365
2a2d_A478 X-Ray Structure Of Human N-Acetyl Galactosamine Kin 1e-57
2aj4_A548 Crystal Structure Of Saccharomyces Cerevisiae Galac 1e-36
3v5r_A505 Crystal Structure Of The Unliganded Form Of Gal3p L 2e-34
3v2u_C520 Crystal Structure Of The Yeast Gal Regulon Complex 2e-34
1pie_A419 Crystal Structure Of Lactococcus Lactis Galactokina 4e-10
2hfu_A332 Crystal Structure Of L. Major Mevalonate Kinase In 6e-10
1s4e_A352 Pyrococcus Furiosus Galactokinase In Complex With G 4e-09
2hfs_A332 Crystal Structure Of L. Major Mevalonate Kinase Len 5e-09
2cz9_A350 Crystal Structure Of Galactokinase From Pyrococcus 3e-08
1vis_A324 Crystal Structure Of Mevalonate Kinase Length = 324 1e-05
1kkh_A317 Crystal Structure Of The Methanococcus Jannaschii M 2e-05
2x7i_A308 Crystal Structure Of Mevalonate Kinase From Methici 1e-04
2oi2_A292 Streptococcus Pneumoniae Mevalonate Kinase In Compl 8e-04
>pdb|2A2D|A Chain A, X-Ray Structure Of Human N-Acetyl Galactosamine Kinase Complexed With Mn-Amppnp And N-Acetyl Glactosamine Length = 478 Back     alignment and structure 
Iteration: 1

 Score =  220 bits (560), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 137/335 (40%), Positives = 197/335 (58%), Gaps = 39/335 (11%)
Query: 34  AFVCSSTVALMAAFGVEVPKKEIAQLTCECEQFIGTQSGGMDQAISIMAKSGFAELIDFN 93
           A VC + +  +   G  + K E+A++  + E++IGT+ GGMDQ+IS +A+ G A+LI+F+
Sbjct: 169 ALVCCAGLVTLTVLGRNLSKVELAEICAKSERYIGTEGGGMDQSISFLAEEGTAKLIEFS 228
Query: 94  PIRTTDVQLPAGGTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIKLGMKPQEAI 153
           P+R TDV+LP+G  FV+A+S  E  KA  A S++N RV+ECRL A +LA    ++     
Sbjct: 229 PLRATDVKLPSGAVFVIANSCVEMNKA--ATSHFNIRVMECRLAAKLLAKYKSLQ----W 282
Query: 154 SKVKTLSDVEGLCVAFACKNGSS--DPVFAVKEFLRKEPYTALDIEKIT----EEKLTSI 207
            KV  L +V+        K G S  + +   ++ L  EPY   +I +      EE  T I
Sbjct: 283 DKVLRLEEVQA-------KLGISLEEMLLVTEDALHPEPYNPEEICRCLGISLEELRTQI 335
Query: 208 FANSSSSLDVLNAAKQYKLHQRAAHVYSEAKRVHAFKDTVSSNLRLLCSE--EDKLKKLG 265
              S ++ DVL     +KL+QRA HVYSEA RV  FK         +C E  E+ ++ LG
Sbjct: 336 L--SPNTQDVL----IFKLYQRAKHVYSEAARVLQFKK--------ICEEAPENMVQLLG 381
Query: 266 DLMNDSHHSCSVLYECSCPELEELVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQFI 325
           +LMN SH SC  +YECSCPEL++LV++CR  GA G+RLTGAGWGGC V++V       F+
Sbjct: 382 ELMNQSHMSCRDMYECSCPELDQLVDICRKFGAQGSRLTGAGWGGCTVSMVPADKLPSFL 441
Query: 326 LNLKEQFYQSRIDRGVINNNDLGLYVFASKPSSGA 360
            N+ + +YQ R D  +         +FA+KP  GA
Sbjct: 442 ANVHKAYYQ-RSDGSLAPEKQ---SLFATKPGGGA 472
>pdb|2AJ4|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Galactokinase In Complex With Galactose And Mg:amppnp Length = 548 Back     alignment and structure
>pdb|3V5R|A Chain A, Crystal Structure Of The Unliganded Form Of Gal3p Length = 505 Back     alignment and structure
>pdb|3V2U|C Chain C, Crystal Structure Of The Yeast Gal Regulon Complex Of The Repressor, Gal80p, And The Transducer, Gal3p, With Galactose And Atp Length = 520 Back     alignment and structure
>pdb|1PIE|A Chain A, Crystal Structure Of Lactococcus Lactis Galactokinase Complexed With Galactose Length = 419 Back     alignment and structure
>pdb|2HFU|A Chain A, Crystal Structure Of L. Major Mevalonate Kinase In Complex With R-Mevalonate Length = 332 Back     alignment and structure
>pdb|1S4E|A Chain A, Pyrococcus Furiosus Galactokinase In Complex With Galactose, Adp And Magnesium Length = 352 Back     alignment and structure
>pdb|2HFS|A Chain A, Crystal Structure Of L. Major Mevalonate Kinase Length = 332 Back     alignment and structure
>pdb|2CZ9|A Chain A, Crystal Structure Of Galactokinase From Pyrococcus Horikoshi Length = 350 Back     alignment and structure
>pdb|1VIS|A Chain A, Crystal Structure Of Mevalonate Kinase Length = 324 Back     alignment and structure
>pdb|1KKH|A Chain A, Crystal Structure Of The Methanococcus Jannaschii Mevalonate Kinase Length = 317 Back     alignment and structure
>pdb|2X7I|A Chain A, Crystal Structure Of Mevalonate Kinase From Methicillin- Resistant Staphylococcus Aureus Mrsa252 Length = 308 Back     alignment and structure
>pdb|2OI2|A Chain A, Streptococcus Pneumoniae Mevalonate Kinase In Complex With Diphosphomevalonate Length = 292 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query365
2a2c_A478 N-acetylgalactosamine kinase; galactokinase, , tra 9e-99
3v2u_C520 Protein GAL3; rossmann fold, GHMP superfamily, tra 2e-85
2cz9_A350 Probable galactokinase; structural genomics, NPPSF 2e-56
1pie_A419 Galactokinase; galactose, galactosemia, transferas 8e-56
1wuu_A399 Galactokinase; galactosemia, GHMP superfamily, tra 3e-52
1kkh_A317 Mevalonate kinase; mixed beta sheet, phosphate-bin 1e-24
1kkh_A317 Mevalonate kinase; mixed beta sheet, phosphate-bin 1e-09
2x7i_A308 Mevalonate kinase; transferase; HET: CIT; 2.20A {S 3e-24
2x7i_A308 Mevalonate kinase; transferase; HET: CIT; 2.20A {S 9e-11
2hfs_A332 Mevalonate kinase, putative; GHMP kinase, trypanos 5e-23
2hfs_A332 Mevalonate kinase, putative; GHMP kinase, trypanos 5e-12
2oi2_A292 Mevalonate kinase; enzyme-inhibitor complex, trans 6e-23
2oi2_A292 Mevalonate kinase; enzyme-inhibitor complex, trans 2e-10
3k85_A357 D-glycero-D-manno-heptose 1-phosphate kinase; bact 3e-19
3k85_A357 D-glycero-D-manno-heptose 1-phosphate kinase; bact 1e-07
1kvk_A395 MK, mevalonate kinase; RMK, ATP, GHMP, transferase 5e-15
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-12
3k17_A365 LIN0012 protein; protein structure initiative II(P 1e-11
3k17_A365 LIN0012 protein; protein structure initiative II(P 8e-07
2pg9_A337 Phosphomevalonate kinase; GHMP kinase superfamily, 4e-10
>2a2c_A N-acetylgalactosamine kinase; galactokinase, , transferase; HET: NG1 ADP; 1.65A {Homo sapiens} PDB: 2a2d_A* Length = 478 Back     alignment and structure
 Score =  300 bits (769), Expect = 9e-99
 Identities = 131/339 (38%), Positives = 191/339 (56%), Gaps = 23/339 (6%)

Query: 25  LGSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCECEQFIGTQSGGMDQAISIMAKS 84
             SGLSSS+A VC + +  +   G  + K E+A++  + E++IGT+ GGMDQ+IS +A+ 
Sbjct: 160 PSSGLSSSSALVCCAGLVTLTVLGRNLSKVELAEICAKSERYIGTEGGGMDQSISFLAEE 219

Query: 85  GFAELIDFNPIRTTDVQLPAGGTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIK 144
           G A+LI+F+P+R TDV+LP+G  FV+A+S  E  KA  A S++N RV+ECRL A +LA  
Sbjct: 220 GTAKLIEFSPLRATDVKLPSGAVFVIANSCVEMNKA--ATSHFNIRVMECRLAAKLLAKY 277

Query: 145 LGMKPQEAISKVKTLSDVEGLCVAFACKNGSSDPVFAVKEFLRKEPYTALDIEKITEEKL 204
             ++      KV  L +V+             + +   ++ L  EPY   +I +     L
Sbjct: 278 KSLQWD----KVLRLEEVQAK-----LGISLEEMLLVTEDALHPEPYNPEEICRCLGISL 328

Query: 205 TSIFANSSSSLDVLNAAKQYKLHQRAAHVYSEAKRVHAFKDTVSSNLRLLCSEEDKLKKL 264
             +     S          +KL+QRA HVYSEA RV  FK           + E+ ++ L
Sbjct: 329 EELRTQILSPNTQD--VLIFKLYQRAKHVYSEAARVLQFKKICEE------APENMVQLL 380

Query: 265 GDLMNDSHHSCSVLYECSCPELEELVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQF 324
           G+LMN SH SC  +YECSCPEL++LV++CR  GA G+RLTGAGWGGC V++V       F
Sbjct: 381 GELMNQSHMSCRDMYECSCPELDQLVDICRKFGAQGSRLTGAGWGGCTVSMVPADKLPSF 440

Query: 325 ILNLKEQFYQSRIDRGVINNNDLGLYVFASKPSSGAAKF 363
           + N+ + +YQ    R   +       +FA+KP  GA   
Sbjct: 441 LANVHKAYYQ----RSDGSLAPEKQSLFATKPGGGALVL 475
>3v2u_C Protein GAL3; rossmann fold, GHMP superfamily, transcription regulation, transcription; HET: GLA ATP; 2.10A {Saccharomyces cerevisiae} PDB: 3v5r_A 2aj4_A* Length = 520 Back     alignment and structure
>2cz9_A Probable galactokinase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.50A {Pyrococcus horikoshii} PDB: 2dei_A* 2dej_A* 1s4e_A* Length = 350 Back     alignment and structure
>1pie_A Galactokinase; galactose, galactosemia, transferase; HET: GLA; 2.10A {Lactococcus lactis} SCOP: d.14.1.5 d.58.26.7 Length = 419 Back     alignment and structure
>1wuu_A Galactokinase; galactosemia, GHMP superfamily, transferase; HET: GLA ANP; 2.50A {Homo sapiens} SCOP: d.14.1.5 d.58.26.7 Length = 399 Back     alignment and structure
>1kkh_A Mevalonate kinase; mixed beta sheet, phosphate-binding loop, beta-alpha-beta, transferase; 2.40A {Methanocaldococcus jannaschii} SCOP: d.14.1.5 d.58.26.3 PDB: 1vis_A Length = 317 Back     alignment and structure
>1kkh_A Mevalonate kinase; mixed beta sheet, phosphate-binding loop, beta-alpha-beta, transferase; 2.40A {Methanocaldococcus jannaschii} SCOP: d.14.1.5 d.58.26.3 PDB: 1vis_A Length = 317 Back     alignment and structure
>2x7i_A Mevalonate kinase; transferase; HET: CIT; 2.20A {Staphylococcus aureus} Length = 308 Back     alignment and structure
>2x7i_A Mevalonate kinase; transferase; HET: CIT; 2.20A {Staphylococcus aureus} Length = 308 Back     alignment and structure
>2hfs_A Mevalonate kinase, putative; GHMP kinase, trypanosomatid parasite, transferase; 1.75A {Leishmania major} PDB: 2hfu_A* Length = 332 Back     alignment and structure
>2hfs_A Mevalonate kinase, putative; GHMP kinase, trypanosomatid parasite, transferase; 1.75A {Leishmania major} PDB: 2hfu_A* Length = 332 Back     alignment and structure
>2oi2_A Mevalonate kinase; enzyme-inhibitor complex, transferase; HET: DP6; 2.50A {Streptococcus pneumoniae} Length = 292 Back     alignment and structure
>2oi2_A Mevalonate kinase; enzyme-inhibitor complex, transferase; HET: DP6; 2.50A {Streptococcus pneumoniae} Length = 292 Back     alignment and structure
>3k85_A D-glycero-D-manno-heptose 1-phosphate kinase; bacteriodes thetaiotaomicron, protein structure initiative II(PSI II), nysgxrc; 2.28A {Bacteroides thetaiotaomicron} Length = 357 Back     alignment and structure
>3k85_A D-glycero-D-manno-heptose 1-phosphate kinase; bacteriodes thetaiotaomicron, protein structure initiative II(PSI II), nysgxrc; 2.28A {Bacteroides thetaiotaomicron} Length = 357 Back     alignment and structure
>1kvk_A MK, mevalonate kinase; RMK, ATP, GHMP, transferase; HET: ATP; 2.40A {Rattus norvegicus} SCOP: d.14.1.5 d.58.26.3 PDB: 2r42_A* 2r3v_A Length = 395 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3k17_A LIN0012 protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics, NEW YORK SGX research center for structural genomics; HET: PGE; 2.10A {Listeria innocua} Length = 365 Back     alignment and structure
>3k17_A LIN0012 protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics, NEW YORK SGX research center for structural genomics; HET: PGE; 2.10A {Listeria innocua} Length = 365 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query365
3v2u_C520 Protein GAL3; rossmann fold, GHMP superfamily, tra 100.0
2a2c_A478 N-acetylgalactosamine kinase; galactokinase, , tra 100.0
1pie_A419 Galactokinase; galactose, galactosemia, transferas 100.0
1wuu_A399 Galactokinase; galactosemia, GHMP superfamily, tra 100.0
2cz9_A350 Probable galactokinase; structural genomics, NPPSF 100.0
3k85_A357 D-glycero-D-manno-heptose 1-phosphate kinase; bact 100.0
1kvk_A395 MK, mevalonate kinase; RMK, ATP, GHMP, transferase 100.0
2hfs_A332 Mevalonate kinase, putative; GHMP kinase, trypanos 99.98
3gon_A335 Phosphomevalonate kinase; GHMP kinase superfamily, 99.98
3k17_A365 LIN0012 protein; protein structure initiative II(P 99.98
4hac_A321 Mevalonate kinase; GHMP, ATP binding, phosphorylat 99.98
2pg9_A337 Phosphomevalonate kinase; GHMP kinase superfamily, 99.97
2x7i_A308 Mevalonate kinase; transferase; HET: CIT; 2.20A {S 99.97
2oi2_A292 Mevalonate kinase; enzyme-inhibitor complex, trans 99.97
1kkh_A317 Mevalonate kinase; mixed beta sheet, phosphate-bin 99.96
1h72_C296 HK, homoserine kinase; transferase, threonine bios 99.96
3hul_A298 HSK, HK, homoserine kinase; structural genomics, p 99.92
3pyf_A306 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.91
2gs8_A317 Mevalonate pyrophosphate decarboxylase; streptococ 99.89
3qt5_A332 Mevalonate diphosphate decarboxylase; GHMP kinase 99.88
1uek_A275 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol k 99.82
2v8p_A271 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.81
1fi4_A416 Mevalonate 5-diphosphate decarboxylase; mixed alph 99.76
2ww4_A283 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; 99.73
3lto_A323 Mevalonate diphosphate decarboxylase; protein stru 99.73
2hke_A380 Diphosphomevalonate decarboxylase, putative; meval 99.72
3f0n_A414 Mevalonate pyrophosphate decarboxylase; cholestero 99.65
>3v2u_C Protein GAL3; rossmann fold, GHMP superfamily, transcription regulation, transcription; HET: GLA ATP; 2.10A {Saccharomyces cerevisiae} PDB: 3v5r_A 2aj4_A* Back     alignment and structure
Probab=100.00  E-value=1.6e-59  Score=474.60  Aligned_cols=346  Identities=31%  Similarity=0.490  Sum_probs=291.8

Q ss_pred             cCCceEEEEEecCCCCCCCChHHHHHHHHHHHHHHHh---CCCCCHHHHHHHHHHhhhhhCCCCCchhHHHHHhhcCCeE
Q 017802           11 KFQLFNHINSLFFNLGSGLSSSTAFVCSSTVALMAAF---GVEVPKKEIAQLTCECEQFIGTQSGGMDQAISIMAKSGFA   87 (365)
Q Consensus        11 ~~~g~~i~i~s~iP~g~GLGSSaAl~va~~~al~~~~---~~~l~~~el~~la~~~E~~~g~~~G~~D~~~~~~Gg~~~~   87 (365)
                      +.+||++.|.|+||.|+||  |||+++|++.|++.++   +.++++.+++++|+++|+++|.+||+|||+++++|+.+++
T Consensus       144 ~~~G~~i~i~s~vP~gsGL--SAA~~va~~~Al~~~~~g~~~~l~~~~la~la~~aE~~vG~~~G~mDQ~as~~G~~g~~  221 (520)
T 3v2u_C          144 PLVGAQIFCQSDIPTGGGL--SSAFTCAAALATIRANMGKNFDISKKDLTRITAVAEHYVGVNNGGMDQATSVYGEEDHA  221 (520)
T ss_dssp             CCCCEEEEEEECCCTTSSH--HHHHHHHHHHHHHHHHHCTTCCCBHHHHHHHHTTGGGGGTCCCCSHHHHHHHHCBTTBE
T ss_pred             CCCceEEEEecCCCCCCCH--HHHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHHHhCCCCchhhHHHHHhCCCCeE
Confidence            4589999999999999999  9999999999999998   7789999999999999999999999999999999999999


Q ss_pred             EEeecCC-CceEeeecCC----CcEEEEEecCCcchhhhhcccchhhHHHHHHHHHHHHHHHhCCCchh----hhhcccc
Q 017802           88 ELIDFNP-IRTTDVQLPA----GGTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIKLGMKPQE----AISKVKT  158 (365)
Q Consensus        88 ~~i~~~~-~~~~~~~~p~----~~~~vli~s~~~~~k~~~~~~~y~~r~~e~~~a~~~l~~~~~~~~~~----~~~~~~~  158 (365)
                      +++||++ ++++++|+|+    ++.|+|+||++.++||.+++++||.||+||+.|+++|++++++....    .-....+
T Consensus       222 l~id~~~~l~~~~v~~p~~~~~~~~~vI~ns~v~~~k~~la~s~YN~Rr~eCe~Aa~~L~~~~g~~~~~~~~~~~~~~~s  301 (520)
T 3v2u_C          222 LYVEFRPKLKATPFKFPQLKNHEISFVIANTLVKSNKFETAPTNYNLRVIEVTVAANALATRYSVALPSHKDNSNSERGN  301 (520)
T ss_dssp             EEEECSSSCEEEEECCCCCSSCEEEEEEEECCCCCCHHHHTTTTHHHHHHHHHHHHHHHHHHTTBCCCCCCSCSSCTTCC
T ss_pred             EEEEcCCCceeEEeeCCCccCCCeEEEEEECCCcccccccccchhhHHHHHHHHHHHHHHHhhCCccccccccccccccc
Confidence            9999999 9999999987    79999999999888999999999999999999999999998764210    0011247


Q ss_pred             chhhhhhhhh--------hhcC-----CCCCChhHHHHHhhhc--CCCCHHHHHHHHhhhhhhhhhcCCCchhHHhhhhh
Q 017802          159 LSDVEGLCVA--------FACK-----NGSSDPVFAVKEFLRK--EPYTALDIEKITEEKLTSIFANSSSSLDVLNAAKQ  223 (365)
Q Consensus       159 L~~v~~~~~~--------~~~~-----~~~~~~~~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (365)
                      |||+.+.++.        |++.     .+..+|.+.+.+.+.+  .+|+++++.+.++.+.+++.+.++..+++  +.+.
T Consensus       302 LRdv~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~l~~~~~~yt~~e~~~~l~~~~~~l~~~~l~~~~~--~~~~  379 (520)
T 3v2u_C          302 LRDFMDAYYARYENQAQPWNGDIGTGIERLLKMLQLVEESFSRKKSGFTVHEASTALNCSREEFTRDYLTTFPV--RFQV  379 (520)
T ss_dssp             HHHHHHHHHHHHCTTSCCCSSCHHHHHHHHHHHHHHHHHHHTTCTTCBCHHHHHHHTTSCHHHHHHHHTSSSCE--EESC
T ss_pred             HHHHhHhhhhhccccccccccchhhHHHHHHHHHHHHHHHhhhccccccHHHHHHhhcCChhhhhhhhcccccc--cccc
Confidence            9998765421        1110     0112344556666655  38999999998886555655555555443  3445


Q ss_pred             HHHHHHHhHHHHHhhhHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHhhhhcCCCChHHHHHHHHHHhCCCcEEEE
Q 017802          224 YKLHQRAAHVYSEAKRVHAFKDTVSSNLRLLCSEEDKLKKLGDLMNDSHHSCSVLYECSCPELEELVNVCRNNGALGARL  303 (365)
Q Consensus       224 ~~~~~r~~~~~~E~~rv~~~~~al~~~d~~~~~~~~~~~~lg~lm~~sh~~lr~~~~~s~peld~lv~~a~~~Ga~Gaki  303 (365)
                      +.+++|++|+++|+.||.+++.+|++++  ..+.+++++.||+||+++|.+||++|++|||++|.|++++++.|++|+||
T Consensus       380 ~~l~~RA~HVv~E~~Rv~~~~~al~~~~--~~~~~~d~~~lg~lm~~sH~slr~~~~vS~peld~lv~~a~~~Ga~Garl  457 (520)
T 3v2u_C          380 LKLYQRAKHVYSESLRVLKALKMMTSAT--FHTDEDFFTDFGRLMNESQASCDKLYECSCIETNQICSIALANGSFGSRL  457 (520)
T ss_dssp             BCHHHHHHHHHHHHHHHHHHHHHHTCSS--CCCHHHHHHHHHHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHTTCSEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHcCC--cccchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHhCCCCEEEE
Confidence            6789999999999999999999999874  11223469999999999999999999999999999999999999999999


Q ss_pred             ccccCcceEEEEE---cCCcHHHHHHHHHHHHHhcccCCCcccCCCCcceEEEeeCCCceeecc
Q 017802          304 TGAGWGGCVVALV---KESIDSQFILNLKEQFYQSRIDRGVINNNDLGLYVFASKPSSGAAKFK  364 (365)
Q Consensus       304 sGaG~GG~vi~L~---~~~~~~~~~~~l~~~y~~~~~~~~~~~~~~~~~~~~~~~p~~Ga~v~~  364 (365)
                      ||||||||+|+|+   +++.+++++++|++.|+++.+  |.++++++.+.+|+++|+.||+|+.
T Consensus       458 TGaG~GGc~iaLv~~~~~~~~~~~~~~l~~~y~~~~~--~~~~~~~~~~~~~~~~p~~GA~i~~  519 (520)
T 3v2u_C          458 TGAGWGGCTIHLVPSGANGNVEQVRKALIEKFYNVRY--PDLTDEELKDAIIVSKPALGTCLYE  519 (520)
T ss_dssp             CSSCSSSEEEEEEEESTTCSHHHHHHHHHHHTHHHHC--TTCCHHHHHHHEEECCCCCCSEEEE
T ss_pred             ecCCCCceEEEEEcCCCHHHHHHHHHHHHHHHHhccC--CccccccCCCeEEEecCCCceEEee
Confidence            9999999999999   778999999999999998887  5566666789999999999999974
>2a2c_A N-acetylgalactosamine kinase; galactokinase, , transferase; HET: NG1 ADP; 1.65A {Homo sapiens} PDB: 2a2d_A* Back     alignment and structure
>1pie_A Galactokinase; galactose, galactosemia, transferase; HET: GLA; 2.10A {Lactococcus lactis} SCOP: d.14.1.5 d.58.26.7 Back     alignment and structure
>1wuu_A Galactokinase; galactosemia, GHMP superfamily, transferase; HET: GLA ANP; 2.50A {Homo sapiens} SCOP: d.14.1.5 d.58.26.7 Back     alignment and structure
>2cz9_A Probable galactokinase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.50A {Pyrococcus horikoshii} PDB: 2dei_A* 2dej_A* 1s4e_A* Back     alignment and structure
>3k85_A D-glycero-D-manno-heptose 1-phosphate kinase; bacteriodes thetaiotaomicron, protein structure initiative II(PSI II), nysgxrc; 2.28A {Bacteroides thetaiotaomicron} Back     alignment and structure
>1kvk_A MK, mevalonate kinase; RMK, ATP, GHMP, transferase; HET: ATP; 2.40A {Rattus norvegicus} SCOP: d.14.1.5 d.58.26.3 PDB: 2r42_A* 2r3v_A Back     alignment and structure
>2hfs_A Mevalonate kinase, putative; GHMP kinase, trypanosomatid parasite, transferase; 1.75A {Leishmania major} PDB: 2hfu_A* Back     alignment and structure
>3gon_A Phosphomevalonate kinase; GHMP kinase superfamily, ATP-binding, nucleotide- binding, transferase; HET: PMV ANP; 1.90A {Streptococcus pneumoniae} PDB: 1k47_A Back     alignment and structure
>3k17_A LIN0012 protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics, NEW YORK SGX research center for structural genomics; HET: PGE; 2.10A {Listeria innocua} Back     alignment and structure
>4hac_A Mevalonate kinase; GHMP, ATP binding, phosphorylation, transferase; 1.92A {Methanosarcina mazei} Back     alignment and structure
>2x7i_A Mevalonate kinase; transferase; HET: CIT; 2.20A {Staphylococcus aureus} Back     alignment and structure
>2oi2_A Mevalonate kinase; enzyme-inhibitor complex, transferase; HET: DP6; 2.50A {Streptococcus pneumoniae} Back     alignment and structure
>1kkh_A Mevalonate kinase; mixed beta sheet, phosphate-binding loop, beta-alpha-beta, transferase; 2.40A {Methanocaldococcus jannaschii} SCOP: d.14.1.5 d.58.26.3 PDB: 1vis_A Back     alignment and structure
>1h72_C HK, homoserine kinase; transferase, threonine biosynthesis; HET: ANP; 1.8A {Methanococcus jannaschii} SCOP: d.14.1.5 d.58.26.1 PDB: 1fwl_A 1fwk_A* 1h73_A* 1h74_A* Back     alignment and structure
>3hul_A HSK, HK, homoserine kinase; structural genomics, putative homoserine kinase, THRB, amino-acid biosynthesis, ATP-binding, cytoplasm; 2.19A {Listeria monocytogenes} Back     alignment and structure
>3pyf_A 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; transferase; HET: ANP; 1.70A {Mycobacterium tuberculosis} PDB: 3pyd_A* 3pye_A* 3pyg_A* 4ed4_A* 4dxl_A* 4emd_A* Back     alignment and structure
>2gs8_A Mevalonate pyrophosphate decarboxylase; streptococcus pyogen structural genomics, PSI, protein structure initiative; HET: MSE; 1.50A {Streptococcus pyogenes m1 gas} Back     alignment and structure
>3qt5_A Mevalonate diphosphate decarboxylase; GHMP kinase family, lyase; 1.85A {Staphylococcus epidermidis} PDB: 3qt6_A* 3qt7_A* 4dpt_A* 4du7_A* 4dpu_A* 3qt8_A* 4dpx_A 4dpy_A* 4du8_A* 4dpw_A* 2hk2_A 2hk3_A Back     alignment and structure
>1uek_A 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase; non-mevalonate pathway, GHMP superfamily; 1.70A {Thermus thermophilus} SCOP: d.14.1.5 d.58.26.5 Back     alignment and structure
>2v8p_A 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; nucleotide-binding, isoprene biosynthesis, transferase, ATP-binding, non-mevalonate; HET: CDP ADP; 2.1A {Aquifex aeolicus} PDB: 2v2v_A* 2v2q_A* 2v34_A* 2v2z_A* 2vf3_A* Back     alignment and structure
>1fi4_A Mevalonate 5-diphosphate decarboxylase; mixed alpha/beta structure, ATP binding, CHOL biosynthesis, structural genomics, PSI; 2.27A {Saccharomyces cerevisiae} SCOP: d.14.1.5 d.58.26.2 Back     alignment and structure
>2ww4_A 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; non-mevalonate pathway, isoprenoid biosynthesis, transferase; HET: ADP; 2.00A {Escherichia coli} PDB: 1oj4_A* Back     alignment and structure
>3lto_A Mevalonate diphosphate decarboxylase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.27A {Legionella pneumophila} Back     alignment and structure
>2hke_A Diphosphomevalonate decarboxylase, putative; mevalonate diphosphate decarboxylase, lyase; 1.80A {Trypanosoma brucei} Back     alignment and structure
>3f0n_A Mevalonate pyrophosphate decarboxylase; cholesterol biosynthesis, lipid synthesis, lyase, steroid biosynthesis, sterol biosynthesis; 1.90A {Mus musculus} PDB: 3d4j_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 365
d1s4ea2171 d.58.26.7 (A:181-351) Galactokinase {Archaeon Pyro 2e-22
d1piea2183 d.58.26.7 (A:214-396) Galactokinase {Lactococcus l 2e-22
d1wuua2176 d.58.26.7 (A:217-392) Galactokinase {Human (Homo s 7e-20
d1wuua1215 d.14.1.5 (A:2-216) Galactokinase {Human (Homo sapi 2e-16
d1s4ea1176 d.14.1.5 (A:5-180) Galactokinase {Archaeon Pyrococ 3e-15
d1kvka2169 d.58.26.3 (A:226-394) Mevalonate kinase {Rat (Ratt 4e-15
d1piea1205 d.14.1.5 (A:9-213) Galactokinase {Lactococcus lact 6e-14
d1kkha2137 d.58.26.3 (A:181-317) Mevalonate kinase {Archaeon 3e-11
d1kkha1180 d.14.1.5 (A:1-180) Mevalonate kinase {Archaeon Met 1e-07
d1k47a2135 d.58.26.4 (A:195-329) Phosphomevalonate kinase (PM 7e-06
d1kvka1225 d.14.1.5 (A:1-225) Mevalonate kinase {Rat (Rattus 1e-05
d1k47a1194 d.14.1.5 (A:1-194) Phosphomevalonate kinase (PMK) 6e-05
>d1s4ea2 d.58.26.7 (A:181-351) Galactokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 171 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: GHMP Kinase, C-terminal domain
family: Galactokinase
domain: Galactokinase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

 Score = 90.9 bits (225), Expect = 2e-22
 Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 18/135 (13%)

Query: 226 LHQRAAHVYSEAKRVHAFKDTVSSNLRLLCSEEDKLKKLGDLMNDSHHSCSVLYECSCPE 285
             +  +++  E  RV   +D           +E  ++K+G ++  +H   +  Y  SC E
Sbjct: 54  HRKFFSYIVRENARVLEVRD---------ALKEGDIEKVGKILTTAHWDLAENYRVSCEE 104

Query: 286 LEELVNVCRNNGALGARLTGAGWGGCVVALVKESIDSQFILNLKEQFYQSRIDRGVINNN 345
           L+  V      GA GARLTGAG+GG  +ALV +         +  ++             
Sbjct: 105 LDFFVKKAMELGAYGARLTGAGFGGSAIALVDKDKAKTIGDAILREYLA---------KF 155

Query: 346 DLGLYVFASKPSSGA 360
                 F  KPS G 
Sbjct: 156 SWKAKYFVVKPSDGV 170
>d1piea2 d.58.26.7 (A:214-396) Galactokinase {Lactococcus lactis [TaxId: 1358]} Length = 183 Back     information, alignment and structure
>d1wuua2 d.58.26.7 (A:217-392) Galactokinase {Human (Homo sapiens) [TaxId: 9606]} Length = 176 Back     information, alignment and structure
>d1wuua1 d.14.1.5 (A:2-216) Galactokinase {Human (Homo sapiens) [TaxId: 9606]} Length = 215 Back     information, alignment and structure
>d1s4ea1 d.14.1.5 (A:5-180) Galactokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 176 Back     information, alignment and structure
>d1kvka2 d.58.26.3 (A:226-394) Mevalonate kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 169 Back     information, alignment and structure
>d1piea1 d.14.1.5 (A:9-213) Galactokinase {Lactococcus lactis [TaxId: 1358]} Length = 205 Back     information, alignment and structure
>d1kkha2 d.58.26.3 (A:181-317) Mevalonate kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 137 Back     information, alignment and structure
>d1kkha1 d.14.1.5 (A:1-180) Mevalonate kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 180 Back     information, alignment and structure
>d1k47a2 d.58.26.4 (A:195-329) Phosphomevalonate kinase (PMK) {Streptococcus pneumoniae r6 [TaxId: 171101]} Length = 135 Back     information, alignment and structure
>d1kvka1 d.14.1.5 (A:1-225) Mevalonate kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 225 Back     information, alignment and structure
>d1k47a1 d.14.1.5 (A:1-194) Phosphomevalonate kinase (PMK) {Streptococcus pneumoniae r6 [TaxId: 171101]} Length = 194 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query365
d1piea2183 Galactokinase {Lactococcus lactis [TaxId: 1358]} 100.0
d1s4ea2171 Galactokinase {Archaeon Pyrococcus furiosus [TaxId 100.0
d1wuua2176 Galactokinase {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1kvka2169 Mevalonate kinase {Rat (Rattus norvegicus) [TaxId: 99.87
d1s4ea1176 Galactokinase {Archaeon Pyrococcus furiosus [TaxId 99.85
d1piea1205 Galactokinase {Lactococcus lactis [TaxId: 1358]} 99.83
d1wuua1215 Galactokinase {Human (Homo sapiens) [TaxId: 9606]} 99.81
d1kkha2137 Mevalonate kinase {Archaeon Methanococcus jannasch 99.7
d1k47a2135 Phosphomevalonate kinase (PMK) {Streptococcus pneu 99.63
d1kkha1180 Mevalonate kinase {Archaeon Methanococcus jannasch 99.57
d1kvka1225 Mevalonate kinase {Rat (Rattus norvegicus) [TaxId: 99.49
d1h72c1163 Homoserine kinase {Archaeon Methanococcus jannasch 99.46
d1k47a1194 Phosphomevalonate kinase (PMK) {Streptococcus pneu 99.37
d1h72c2133 Homoserine kinase {Archaeon Methanococcus jannasch 99.0
d1oj4a1163 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol k 98.68
d1ueka1148 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol k 98.44
d1fi4a1188 Mevalonate 5-diphosphate decarboxylase {Baker's ye 97.42
d1ueka2120 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol k 97.25
d1oj4a2120 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol k 95.56
d1fi4a2203 Mevalonate 5-diphosphate decarboxylase {Baker's ye 92.55
>d1piea2 d.58.26.7 (A:214-396) Galactokinase {Lactococcus lactis [TaxId: 1358]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: GHMP Kinase, C-terminal domain
family: Galactokinase
domain: Galactokinase
species: Lactococcus lactis [TaxId: 1358]

Probab=100.00  E-value=1.3e-37  Score=271.68  Aligned_cols=182  Identities=27%  Similarity=0.411  Sum_probs=156.9

Q ss_pred             CcEEEEEecCCcchhhhhcccchhhHHHHHHHHHHHHHHHhCCCchhhhhccccchhhhhhhhhhhcCCCCCChhHHHHH
Q 017802          105 GGTFVVAHSLAESLKAITAASNYNNRVVECRLTAIVLAIKLGMKPQEAISKVKTLSDVEGLCVAFACKNGSSDPVFAVKE  184 (365)
Q Consensus       105 ~~~~vli~s~~~~~k~~~~~~~y~~r~~e~~~a~~~l~~~~~~~~~~~~~~~~~L~~v~~~~~~~~~~~~~~~~~~~v~~  184 (365)
                      ||.|+|+||++   +|++++++||.|+.||+.|++.+.+++++         ++|++++.                    
T Consensus         1 dy~lvi~dS~v---~h~L~~s~Yn~R~~ec~~a~~~v~~~~~~---------~~L~~v~~--------------------   48 (183)
T d1piea2           1 DYDIVIMNTNK---PRALTESKYNERFAETREALKRMQTRLDI---------QSLGELSN--------------------   48 (183)
T ss_dssp             TEEEEEEECCC---CCCTTCHHHHHHHHHHHHHHHHHHHHCCC---------SSGGGCCH--------------------
T ss_pred             CeEEEEEeCCC---CcCcCcchhHHHHHHHHHHHHHHHHhcCc---------chHhhhcH--------------------
Confidence            57899999999   57788899999999999999999887654         46777542                    


Q ss_pred             hhhcCCCCHHHHHHHHhhhhhhhhhcCCCchhHHhhhhhHHHHHHHhHHHHHhhhHHHHHHHHhcccccccchHHHHHHH
Q 017802          185 FLRKEPYTALDIEKITEEKLTSIFANSSSSLDVLNAAKQYKLHQRAAHVYSEAKRVHAFKDTVSSNLRLLCSEEDKLKKL  264 (365)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~E~~rv~~~~~al~~~d~~~~~~~~~~~~l  264 (365)
                               +++.+.... +                 ..+.+++|+.|+++|+.||.+++++|+++|         ++.|
T Consensus        49 ---------~~l~~~~~~-l-----------------~d~~~~rRa~Hvv~En~Rv~~a~~al~~~d---------~~~~   92 (183)
T d1piea2          49 ---------EEFDANTDL-I-----------------GDETLIKRARHAVYENNRTKIAQKAFVAGN---------LTKF   92 (183)
T ss_dssp             ---------HHHHHTGGG-T-----------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHTC---------HHHH
T ss_pred             ---------HHHHHHHhh-c-----------------CCHHHHHHHHHHHHHHHHHHHhhhhhhhcc---------HHHH
Confidence                     223222110 0                 012467899999999999999999999999         9999


Q ss_pred             HHHHHHHHHHhhhhcCCCChHHHHHHHHHHhC-CCcEEEEccccCcceEEEEEcCCcHHHHHHHHHHHHHhcccCCCccc
Q 017802          265 GDLMNDSHHSCSVLYECSCPELEELVNVCRNN-GALGARLTGAGWGGCVVALVKESIDSQFILNLKEQFYQSRIDRGVIN  343 (365)
Q Consensus       265 g~lm~~sh~~lr~~~~~s~peld~lv~~a~~~-Ga~GakisGaG~GG~vi~L~~~~~~~~~~~~l~~~y~~~~~~~~~~~  343 (365)
                      |+||++||.+++++|++|||++|.|++.+++. |++|+||||+|||||+++|++.+.++++.++|++.|+++++      
T Consensus        93 G~lm~~Sh~sl~~~~evs~~elD~Lv~~a~~~~G~~GaRmtGgGfGGcvialv~~~~~~~~~~~i~~~y~~~~g------  166 (183)
T d1piea2          93 GELLNASHASLKDDYEVTGLELDTLAETAQKQAGVLGARMTGAGFGGCAIALVAHDNVSAFRKAVGQVYEEVVG------  166 (183)
T ss_dssp             HHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHSTTEEEEEECSSCSSSEEEEEEEGGGHHHHHHHHHHHHHHHHS------
T ss_pred             HHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhCCCeEeeccccCCCceEEEEecHHHHHHHHHHHHHHHHHhhC------
Confidence            99999999999999999999999999999874 99999999999999999999999999999999999998775      


Q ss_pred             CCCCcceEEEeeCCCceeec
Q 017802          344 NNDLGLYVFASKPSSGAAKF  363 (365)
Q Consensus       344 ~~~~~~~~~~~~p~~Ga~v~  363 (365)
                         ..+.+|+++|++||+++
T Consensus       167 ---~~~~~~~~~~~~Ga~~i  183 (183)
T d1piea2         167 ---YPASFYVAQIGSGSTKL  183 (183)
T ss_dssp             ---SCCEEEECCBCCCSBCC
T ss_pred             ---CCCcEEEEecCCCceeC
Confidence               46789999999999874
>d1s4ea2 d.58.26.7 (A:181-351) Galactokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1wuua2 d.58.26.7 (A:217-392) Galactokinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kvka2 d.58.26.3 (A:226-394) Mevalonate kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1s4ea1 d.14.1.5 (A:5-180) Galactokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1piea1 d.14.1.5 (A:9-213) Galactokinase {Lactococcus lactis [TaxId: 1358]} Back     information, alignment and structure
>d1wuua1 d.14.1.5 (A:2-216) Galactokinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kkha2 d.58.26.3 (A:181-317) Mevalonate kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1k47a2 d.58.26.4 (A:195-329) Phosphomevalonate kinase (PMK) {Streptococcus pneumoniae r6 [TaxId: 171101]} Back     information, alignment and structure
>d1kkha1 d.14.1.5 (A:1-180) Mevalonate kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1kvka1 d.14.1.5 (A:1-225) Mevalonate kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1h72c1 d.14.1.5 (C:5-167) Homoserine kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1k47a1 d.14.1.5 (A:1-194) Phosphomevalonate kinase (PMK) {Streptococcus pneumoniae r6 [TaxId: 171101]} Back     information, alignment and structure
>d1h72c2 d.58.26.1 (C:168-300) Homoserine kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1oj4a1 d.14.1.5 (A:1-163) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ueka1 d.14.1.5 (A:1-148) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1fi4a1 d.14.1.5 (A:3-190) Mevalonate 5-diphosphate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ueka2 d.58.26.5 (A:149-268) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1oj4a2 d.58.26.5 (A:164-283) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1fi4a2 d.58.26.2 (A:191-393) Mevalonate 5-diphosphate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure