Citrus Sinensis ID: 017825

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-----
Protein Sequence
MLRSMHQNKSSNSSGPEANSNNSFTISSQPWWRGVGHDSTSRAMLQGGIGNISSPREPINGVLVAKTSKSQVNSGMDGGADATKEMLMSVASQADGKFGGQQPSQHSVSLMHPQFSEYLTQPSQLELVGHSIACASYPYSDSYYGGAVPAYGQQALVHPQSMGVHSARMALPLEMAEEPVYVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVNTKKLDSQTSNGTVTNGTSLNVAVSTLPPNSSKSESVATNYSRGTADLSTGCREVTEPQVHKMQQQQRCSNGNGQTYYEGNGNGCYSHHQGFQLFKCHSLPDNKVEEGDFSGQQSGRIVENRAQHRALTIK
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccEEccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccHHHcccccccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccccccccccccccccccccccccccccccccccccEEEcHHHHHHHHHHHHHHHHHHHHcccHHcccccHcHHHHHHHHHccccccccEcccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccccccEccccccccccEEEccccccEEEEcc
Coil and Loop (DISEMBL)
mlrsmhqnkssnssgpeansnnsftissqpwwrgvghdstsRAMLQggignissprepingVLVAKTSksqvnsgmdggaDATKEMLMSVAsqadgkfggqqpsqhsvslmhpqfseyltqpsqlelvghsiacasypysdsyyggavpaygqqalvhpqsmgvhsarmalplemaeepvyvnaKQYHGILRRRQLRAKAELERKLIKVrkpylhesrHLHAMRRArgcggrfvntkkldsqtsngtvtngtSLNVAvstlppnssksesvatnysrgtadlstgcrevtepqvhkmqqqqrcsngngqtyyegngngcyshhqgfqlfkchslpdnkveegdfsgqqsgRIVENRAQHRALTIK
Flexible Loop (DISEMBL)
mlrsmhqnkssnssgpeansnnSFTISSQPWWRGVGHDSTSRAMLQGGIgnissprepINGVLVAktsksqvnsGMDGGADATKEMLMSVASQADGKFGGQQPSQHSVSLMHPQFSEYLTQPSQLELVGHSIACASYPYSDSYYGGAVPAYGQQALVHPQSMGVHSARMALPLEMAEEPVYVNAKQYHGILRRRQLRAKAELERKLikvrkpylhesrhlhamrrargcggrfvntkkldsqtsngtvtngtslnvavstlppnssksesvatnysrGTADLSTGCREVTEPQVHKMQQQQRCSNGNGQTYYEGNGNGCYSHHQGFQLFKCHSLPDNKVEEgdfsgqqsgrivenraqhraltik
Low Complexity Region (SEG)
MLRSMHQNKSSNSSGPEANSNNSFTISSQPWWRGVGHDSTSRAMLQGGIGNISSPREPINGVLVAKTSKSQVNSGMDGGADATKEMLMSVASQADGKFGGQQPSQHSVSLMHPQFSEYLTQPSQLELVGHSIACASYPYSDSYYGGAVPAYGQQALVHPQSMGVHSARMALPLEMAEEPVYVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVNTKKLDSQTSNGTVTNGTSLNVAVSTLPPNSSKSESVATNYSRGTADLSTGCREVTEPQVHKMQQQQRCSNGNGQTYYEGNGNGCYSHHQGFQLFKCHSLPDNKVEEGDFSGQQSGRIVENRAQHRALTIK
Disordered region (IsUnstruct)
******************************WWRGV**********************************************************************************YLTQPSQLELVGHSIACASYPYSDSYYGGAVPAYGQQALVHPQSMGVHSARMALPLEMAEEPVYVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVN**************************************************************************TYYEGNGNGCYSHHQGFQLFKCHSL*******************************
Disordered Region (DISOPRED)
******************************WW**********************************************************************************************************************************************MAEEPVYVNAKQYHGILRRRQLR************************************************************************************************************************************************************************
Disordered Region (DISEMBL)
*********************NSFTISSQPWWRGVGHDSTSRAMLQGGIGNISSPREPINGVLVAKTSKSQVNSGMDGGADATKEMLMSVASQA*************VSLMHPQFSEYLTQPSQLELVGHSIACASYPYSDSYYGGAVPAYGQQALVHPQSMGVHSARMALPLEMAEEPVYVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVNTKKLDSQTSNGTVTNGTSLNVAVSTL*************YSRGTADLSTGCREV***************NGNGQTYYEGNGNGCYSHHQGFQLFKCHSLPDNKVEEGDFSGQQSGRIVENRAQHRALTIK
Disordered Region (DISPRO)
*********************************************************************************************************************YLTQPSQLELVGHSIACASYPYSDSYYGGAVPAYGQQALVHPQSMGVHSARMALPLEMAEEPVYVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVNT*******************************************************************************GNGCYSHHQGFQLFKCHSLPD*********************QHRA****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLRSMHQNKSSNSSGPEANSNNSFTISSQPWWRGVGHDSTSRAMLQGGIGNISSPREPINGVLVAKTSKSQVNSGMDGGADATKEMLMSVASQADGKFGGQQPSQHSVSLMHPQFSEYLTQPSQLELVGHSIACASYPYSDSYYGGAVPAYGQQALVHPQSMGVHSARMALPLEMAEEPVYVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVNTKKLDSQTSNGTVTNGTSLNVAVSTLPPNSSKSESVATNYSRGTADLSTGCREVTEPQVHKMQQQQRCSNGNGQTYYEGNGNGCYSHHQGFQLFKCHSLPDNKVEEGDFSGQQSGRIVENRAQHRALTIK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	365	2.2.26 [Sep-21-2011]
Q9LXV5	272	Nuclear transcription fac	yes	no	0.638	0.856	0.444	2e-41
Q945M9	303	Nuclear transcription fac	no	no	0.369	0.445	0.566	1e-35
Q84JP1	190	Nuclear transcription fac	no	no	0.358	0.689	0.522	4e-31
Q9LNP6	328	Nuclear transcription fac	no	no	0.298	0.332	0.556	9e-29
Q9SYH4	308	Nuclear transcription fac	no	no	0.317	0.376	0.523	2e-28
Q93ZH2	340	Nuclear transcription fac	no	no	0.293	0.314	0.572	2e-28
Q8VY64	198	Nuclear transcription fac	no	no	0.284	0.525	0.561	1e-27
Q9LVJ7	308	Nuclear transcription fac	no	no	0.317	0.376	0.524	1e-27
Q8LFU0	269	Nuclear transcription fac	no	no	0.487	0.661	0.365	2e-24
Q9M9X4	295	Nuclear transcription fac	no	no	0.375	0.464	0.435	6e-24

>sp|Q9LXV5|NFYA1_ARATH Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana GN=NFYA1 PE=2 SV=1

 Score =  170 bits (430), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/250 (44%), Positives = 140/250 (56%), Gaps = 17/250 (6%)

Query: 28  SQPWWRGVGHDSTSRAMLQGGIGNISSPREPINGVLVAKTSKSQVNSGMDGGADAT-KEM 86
           ++PWW+        +A   G   N SS   P NG        +  +  ++G  D T K+ 
Sbjct: 26  AEPWWKNNSFGVVPQARPSGIPSNSSSLDCP-NGSESNDVHSASEDGALNGENDGTWKDS 84

Query: 87  LMSVASQADGKFG--GQQPSQHSVSLMHPQFSEYLTQPSQLELVGHSIACASYPYSDSYY 144
             + +S++    G  G  P+  S+  MH Q    L QP   ELVGH IAC   PY D YY
Sbjct: 85  QAATSSRSVDNHGMEGNDPAL-SIRNMHDQP---LVQPP--ELVGHYIACVPNPYQDPYY 138

Query: 145 GGAVPAYGQQALVHPQSMGVHSARMALPLEMAEEPVYVNAKQYHGILRRRQLRAKAELER 204
           GG + AYG Q L     +G+   R ALPL+MA+EPVYVNAKQY GILRRR+ RAKAELER
Sbjct: 139 GGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNAKQYEGILRRRKARAKAELER 198

Query: 205 KLIKVRKPYLHESRHLHAMRRARGCGGRFVNTKKLDSQTSNGTVTNGTSLNVAVSTLPPN 264
           K+I+ RKPYLHESRH HAMRRAR  GGRF    ++++    G    G       +T   N
Sbjct: 199 KVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEA----GEDAGGRDRERGSAT---N 251

Query: 265 SSKSESVATN 274
           SS SE V T+
Sbjct: 252 SSGSEQVETD 261

Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters.
Arabidopsis thaliana (taxid: 3702)

>sp|Q945M9|NFYA9_ARATH Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana GN=NFYA9 PE=2 SV=1

 Score =  150 bits (380), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 81/143 (56%), Positives = 94/143 (65%), Gaps = 8/143 (5%)

Query: 119 LTQPS-QLELVGHSIACASY-PYSDSYYGGAVPAYGQQALVHPQSMGVHSARMALPLEMA 176
           +TQP    +LVGH++  AS  PY D YY G + AYG   L      G+  +RM LP EMA
Sbjct: 105 ITQPPPHPQLVGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRMPLPPEMA 164

Query: 177 EEPVYVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVN- 235
           +EPV+VNAKQY  ILRRRQ RAKAELE+KLIK RKPYLHESRH HAMRR RG GGRF   
Sbjct: 165 QEPVFVNAKQYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRFAKK 224

Query: 236 -----TKKLDSQTSNGTVTNGTS 253
                +K+   + SNG VT   S
Sbjct: 225 TNTEASKRKAEEKSNGHVTQSPS 247

Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q84JP1|NFYA7_ARATH Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana GN=NFYA7 PE=2 SV=1

 Score =  135 bits (341), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 69/132 (52%), Positives = 84/132 (63%), Gaps = 1/132 (0%)

Query: 131 SIACASYPYSDSYYGGAV-PAYGQQALVHPQSMGVHSARMALPLEMAEEPVYVNAKQYHG 189
           S+A   YPY D YY     P       VH Q MGV    + LP +  EEPV+VNAKQYHG
Sbjct: 52  SMAPGQYPYPDPYYRSIFAPPPQPYTGVHLQLMGVQQQGVPLPSDAVEEPVFVNAKQYHG 111

Query: 190 ILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVNTKKLDSQTSNGTVT 249
           ILRRRQ RA+ E + K+IK RKPYLHESRHLHA+RR RGCGGRF+N KK D    + +  
Sbjct: 112 ILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKKEDEHHEDSSHE 171

Query: 250 NGTSLNVAVSTL 261
             ++L+   S +
Sbjct: 172 EKSNLSAGKSAM 183

Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LNP6|NFYA8_ARATH Nuclear transcription factor Y subunit A-8 OS=Arabidopsis thaliana GN=NFYA8 PE=2 SV=2

 Score =  128 bits (321), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 64/115 (55%), Positives = 81/115 (70%), Gaps = 6/115 (5%)

Query: 131 SIACASYPYSDSYYGGAVPA-YGQQALVHPQSMGVHSARMALPLEMAE-EPVYVNAKQYH 188
           S A  S+ Y+D ++GG +PA Y  QA +    M     R+ LP ++ E EPV+VNAKQ+H
Sbjct: 127 SKANFSFHYADPHFGGLMPAAYLPQATIWNPQM----TRVPLPFDLIENEPVFVNAKQFH 182

Query: 189 GILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVNTKKLDSQT 243
            I+RRRQ RAK E + KLIK RKPYLHESRH+HA++R RG GGRF+NTKKL   T
Sbjct: 183 AIMRRRQQRAKLEAQNKLIKARKPYLHESRHVHALKRPRGSGGRFLNTKKLQEST 237

Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SYH4|NFYA5_ARATH Nuclear transcription factor Y subunit A-5 OS=Arabidopsis thaliana GN=NFYA5 PE=2 SV=1

 Score =  126 bits (317), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 68/130 (52%), Positives = 85/130 (65%), Gaps = 14/130 (10%)

Query: 128 VGHSIACASYPYSDSYYGGAVPAYGQQ--ALVHPQSMGVHSARMALPLEMAE-EPVYVNA 184
           +  S+ CA    +  + G   P Y     AL H + MG+ S+R+ LP  + E EP++VNA
Sbjct: 128 ISWSLQCAE---TSHFNGFLAPEYASTPTALPHLEMMGLVSSRVPLPHHIQENEPIFVNA 184

Query: 185 KQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVNTKKL----- 239
           KQYH ILRRR+ RAK E + KLIK RKPYLHESRHLHA++RARG GGRF+NTKKL     
Sbjct: 185 KQYHAILRRRKHRAKLEAQNKLIKCRKPYLHESRHLHALKRARGSGGRFLNTKKLQESSN 244

Query: 240 ---DSQTSNG 246
               SQ +NG
Sbjct: 245 SLCSSQMANG 254

Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters (By similarity). Involved in the blue light (BL) and abscisic acid (ABA) signaling pathways.

Arabidopsis thaliana (taxid: 3702)

>sp|Q93ZH2|NFYA3_ARATH Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana GN=NFYA3 PE=2 SV=2

 Score =  126 bits (317), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 63/110 (57%), Positives = 81/110 (73%), Gaps = 3/110 (2%)

Query: 133 ACASYPYSDSYYGGAVPA-YGQQA-LVHPQSMGVHSARMALPLEMAE-EPVYVNAKQYHG 189
           A  S+ Y+D +YGG + A Y  QA   +PQ + +   R+ LP E+ E +PV+VNAKQYH 
Sbjct: 131 ANFSFHYADPHYGGLLAATYLPQAPTCNPQMVSMIPGRVPLPAELTETDPVFVNAKQYHA 190

Query: 190 ILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVNTKKL 239
           I+RRRQ RAK E + KLI+ RKPYLHESRH+HA++R RG GGRF+NTKKL
Sbjct: 191 IMRRRQQRAKLEAQNKLIRARKPYLHESRHVHALKRPRGSGGRFLNTKKL 240

Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8VY64|NFYA4_ARATH Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana GN=NFYA4 PE=2 SV=1

 Score =  124 bits (311), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 64/114 (56%), Positives = 75/114 (65%), Gaps = 10/114 (8%)

Query: 132 IACASYPYSDSYYGGAVPAYGQQA-LVHP------QSMGVHSARMALPLEMAEEPVYVNA 184
           +A   YPY D YY      + QQA L HP      Q MG+    + L  +  EEPV+VNA
Sbjct: 48  MAHGLYPYPDPYYRSV---FAQQAYLPHPYPGVQLQLMGMQQPGVPLQCDAVEEPVFVNA 104

Query: 185 KQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVNTKK 238
           KQYHGILRRRQ RAK E   + IK +KPY+HESRHLHA+RR RGCGGRF+N KK
Sbjct: 105 KQYHGILRRRQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKK 158

Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LVJ7|NFYA6_ARATH Nuclear transcription factor Y subunit A-6 OS=Arabidopsis thaliana GN=NFYA6 PE=2 SV=1

 Score =  124 bits (310), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/124 (52%), Positives = 84/124 (67%), Gaps = 8/124 (6%)

Query: 132 IACASYPYSDS---YYGG--AVPAYGQQALVHPQSMGVHSARMALPLEMAE-EPVYVNAK 185
           I  AS+P   +   ++ G  + P   Q  + HPQ  G+  +RM LP  + E EP++VNAK
Sbjct: 119 IEAASWPLHGNVTPHFNGFLSFPYASQHTVQHPQIRGLVPSRMPLPHNIPENEPIFVNAK 178

Query: 186 QYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVNTKKLDSQTSN 245
           QY  ILRRR+ RAK E + KLIKVRKPYLHESRHLHA++R RG GGRF+NTKK   Q SN
Sbjct: 179 QYQAILRRRERRAKLEAQNKLIKVRKPYLHESRHLHALKRVRGSGGRFLNTKK--HQESN 236

Query: 246 GTVT 249
            +++
Sbjct: 237 SSLS 240

Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8LFU0|NFYAA_ARATH Nuclear transcription factor Y subunit A-10 OS=Arabidopsis thaliana GN=NFYA10 PE=2 SV=2

 Score =  113 bits (283), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/216 (36%), Positives = 97/216 (44%), Gaps = 38/216 (17%)

Query: 30  PWWRGVGHDSTSRAMLQGGIGNISSPREPINGVLVAKTSKSQVNSGMDGGADATKEMLMS 89
           PWW   G    +   L G   +         GV    T   Q      G  D      + 
Sbjct: 13  PWWNAFGSQPLTTESLSGEASD------SFTGVKAVTTEAEQ------GVVDKQTSTTLF 60

Query: 90  VASQADGKFGGQQPSQHSVSLMHPQFSEY-LTQPSQLELVGHSIACASYPYSDSYYGGAV 148
             S    K     P  H    M     E+   QP         +    +P+ + YYG  V
Sbjct: 61  TFSPGGEKSSRDVPKPHVAFAMQSACFEFGFAQP---------MMYTKHPHVEQYYG-VV 110

Query: 149 PAYGQQALVHPQSMGVHSARMALPLEMAEE---PVYVNAKQYHGILRRRQLRAKAELERK 205
            AYG Q           S R+ +PL+M  E    +YVN+KQYHGI+RRRQ RAKAE   K
Sbjct: 111 SAYGSQR---------SSGRVMIPLKMETEEDGTIYVNSKQYHGIIRRRQSRAKAE---K 158

Query: 206 LIKVRKPYLHESRHLHAMRRARGCGGRFVNTKKLDS 241
           L + RKPY+H SRHLHAMRR RG GGRF+NTK  D+
Sbjct: 159 LSRCRKPYMHHSRHLHAMRRPRGSGGRFLNTKTADA 194

Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M9X4|NFYA2_ARATH Nuclear transcription factor Y subunit A-2 OS=Arabidopsis thaliana GN=NFYA2 PE=2 SV=1

 Score =  112 bits (279), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 68/156 (43%), Positives = 88/156 (56%), Gaps = 19/156 (12%)

Query: 137 YPYSDSYYGGAVPAYGQQALVHPQSMGVHSARMALPLEMAEE--PVYVNAKQYHGILRRR 194
           YPY +  Y G V AYG Q+            R+ LPL M  E   +YVN+KQYHGI+RRR
Sbjct: 105 YPYGEQQYYGVVSAYGSQS------------RVMLPLNMETEDSTIYVNSKQYHGIIRRR 152

Query: 195 QLRAKAE--LERKLI--KVRKPYLHESRHLHAMRRARGCGGRFVNTKKLDSQTSNGTVTN 250
           Q RAKA   L++K +  + RKPY+H SRHLHA+RR RG GGRF+NTK  + + S      
Sbjct: 153 QSRAKAAAVLDQKKLSSRCRKPYMHHSRHLHALRRPRGSGGRFLNTKSQNLENSGTNAKK 212

Query: 251 GT-SLNVAVSTLPPNSSKSESVATNYSRGTADLSTG 285
           G  S+ +     P  S+   S   +   GT +LS G
Sbjct: 213 GDGSMQIQSQPKPQQSNSQNSEVVHPENGTMNLSNG 248

Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	365
297739684	354	unnamed protein product [Vitis vinifera]	0.958	0.988	0.561	4e-97
225450115	346	PREDICTED: nuclear transcription factor	0.904	0.953	0.487	3e-68
297736254	405	unnamed protein product [Vitis vinifera]	0.904	0.814	0.487	7e-68
359478376	345	PREDICTED: nuclear transcription factor	0.843	0.892	0.463	4e-61
255553570	336	Nuclear transcription factor Y subunit A	0.772	0.839	0.472	6e-61
147834809	446	hypothetical protein VITISV_002755 [Viti	0.849	0.695	0.465	7e-60
255544876	350	Nuclear transcription factor Y subunit A	0.893	0.931	0.440	1e-59
224104075	376	predicted protein [Populus trichocarpa]	0.893	0.867	0.419	4e-59
343157308	377	CCAAT-binding transcription factor subun	0.591	0.572	0.534	8e-58
356527208	336	PREDICTED: nuclear transcription factor	0.830	0.901	0.454	2e-57

>gi|297739684|emb|CBI29866.3| unnamed protein product [Vitis vinifera]

 Score =  360 bits (925), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 205/365 (56%), Positives = 251/365 (68%), Gaps = 15/365 (4%)

Query: 5   MH-QNKSSNSSGPEANSNNSFTISSQPWWRGVGHDSTSRAMLQGGIGNISSPREPINGV- 62
           MH Q +  N    +A+SNN ++I SQPWWRG+G+D  S  +L     N +S   P  GV 
Sbjct: 1   MHKQTERKNQPESKADSNNPYSICSQPWWRGLGNDVISPDVLGESSPNSASAEHPNGGVG 60

Query: 63  LVAKTSKSQVNSGMDGGADATKEMLMSVASQADGKFGGQQP-SQHSVSLMHPQFSEY-LT 120
            +A  S+++V +  D G D  KEM +++ASQ+DG  G +Q   Q +VS+M    +EY L 
Sbjct: 61  TIAIKSRAKVVT--DNGNDPEKEMKITLASQSDGSCGQEQKHPQQAVSMMPMTMAEYHLA 118

Query: 121 QPSQLELVGHSIACASYPYSDSYYGGAVPAYGQQALVHPQSMGVHSARMALPLEMAEEPV 180
            PSQLELVGHSIACASYPYS+ YY G +PAYG Q LV  Q +GV+ ARMALP+EMAEEPV
Sbjct: 119 PPSQLELVGHSIACASYPYSEPYYTGVIPAYGPQGLVQSQFLGVNVARMALPIEMAEEPV 178

Query: 181 YVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVNTKKLD 240
           YVNAKQYHGILRRRQ RAKAELE+KLIKVRKPYLHESRH HAMRRARGCGGRF+NTKKLD
Sbjct: 179 YVNAKQYHGILRRRQSRAKAELEKKLIKVRKPYLHESRHQHAMRRARGCGGRFLNTKKLD 238

Query: 241 SQTSNGTVTNGTSLNVAVSTLPPNSSKSESVATNYSRGTADLSTGCREVTEPQVHKMQQQ 300
           S  S      G+  +V +ST P +SS SES+ +N SR   D  T   +   P V ++  +
Sbjct: 239 SNASYDMPDKGSDPDVNLSTRPISSSVSESLPSNSSR-NEDSPTSHLDARGPSVQELHNR 297

Query: 301 QRCSNGNGQTYYEGNGNGCYSHHQGFQLFKCHSLPDNKVEEGDFSGQQSGRIVENRAQHR 360
           Q  S+        GNGN CY H+QGFQL   HSL D++VEEGD +G+Q  RI+ NRA HR
Sbjct: 298 QIASH--------GNGNSCYPHNQGFQLSTYHSLKDDRVEEGDHAGRQHERILVNRAPHR 349

Query: 361 ALTIK 365
           ALTIK
Sbjct: 350 ALTIK 354

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225450115|ref|XP_002278849.1| PREDICTED: nuclear transcription factor Y subunit A-1-like [Vitis vinifera]

 Score =  265 bits (676), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 172/353 (48%), Positives = 209/353 (59%), Gaps = 23/353 (6%)

Query: 16  PEANSNNSFTISSQPWWRGVGHDSTSRAMLQGGIGNISSPREPINGVLVAKTSKSQVNSG 75
           P   SN S T+ SQPWW GVG+++ S A L GG  + S+  E +N  + +   + Q N  
Sbjct: 14  PGGKSNPSSTVYSQPWWHGVGNNAISPAAL-GGSPSKSTSVEHLNSHITSNGFQLQANGR 72

Query: 76  MDGGADATKEMLMSVASQADGKFGGQQPSQH---SVSLMHPQFSEYLTQPSQLELVGHSI 132
           +D G    K    +VA Q+DG+ G  Q  QH   + S   P  SE+L   SQ+ELVGHSI
Sbjct: 73  LDDGTTFNKGTQPTVALQSDGRNG--QEHQHLNPTASSTLPIMSEHLEPNSQMELVGHSI 130

Query: 133 ACASYPYSDSYYGGAVPAYGQQALVHPQSMGVHSARMALPLEMAEEPVYVNAKQYHGILR 192
              SYPY D +  G + +YG QA+VHP   G+H  RM LPLEM EEPVYVNAKQYHGILR
Sbjct: 131 VLTSYPYQDPHNVGIMTSYGPQAMVHPHLFGMHQPRMPLPLEMEEEPVYVNAKQYHGILR 190

Query: 193 RRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVNTKKLDSQTSNGTVTNGT 252
           RRQ RAKAELE+K IKVRKPYLHESRH HAMRRARGCGGRF+NTKKLD+  +N T   G+
Sbjct: 191 RRQSRAKAELEKKAIKVRKPYLHESRHQHAMRRARGCGGRFLNTKKLDNNDANTTAEKGS 250

Query: 253 SLNVAVSTLPPNSSKSESVATNYSRGTADLSTGCREVTEPQVHKMQQQQRCSNGNGQTYY 312
               A+ST   +SS SE + TN SR   D S+  +E     +  M +    SNGN     
Sbjct: 251 VSGAALSTQSASSSGSEHLPTNSSR-NLDSSSVQQEEKGRTIQDMLEAHTYSNGN----- 304

Query: 313 EGNGNGCYSHHQGFQLFKCHSLPDNKVEEGDFSGQQSGRIVENRAQHRALTIK 365
             NG+G  S +        HS   N  E GD  GQ    +  N A HRAL IK
Sbjct: 305 -RNGHGLSSAY--------HS--SNGSEGGDCFGQPRENMQLNTAPHRALPIK 346

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297736254|emb|CBI24892.3| unnamed protein product [Vitis vinifera]

 Score =  263 bits (673), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 172/353 (48%), Positives = 209/353 (59%), Gaps = 23/353 (6%)

Query: 16  PEANSNNSFTISSQPWWRGVGHDSTSRAMLQGGIGNISSPREPINGVLVAKTSKSQVNSG 75
           P   SN S T+ SQPWW GVG+++ S A L GG  + S+  E +N  + +   + Q N  
Sbjct: 73  PGGKSNPSSTVYSQPWWHGVGNNAISPAAL-GGSPSKSTSVEHLNSHITSNGFQLQANGR 131

Query: 76  MDGGADATKEMLMSVASQADGKFGGQQPSQH---SVSLMHPQFSEYLTQPSQLELVGHSI 132
           +D G    K    +VA Q+DG+ G  Q  QH   + S   P  SE+L   SQ+ELVGHSI
Sbjct: 132 LDDGTTFNKGTQPTVALQSDGRNG--QEHQHLNPTASSTLPIMSEHLEPNSQMELVGHSI 189

Query: 133 ACASYPYSDSYYGGAVPAYGQQALVHPQSMGVHSARMALPLEMAEEPVYVNAKQYHGILR 192
              SYPY D +  G + +YG QA+VHP   G+H  RM LPLEM EEPVYVNAKQYHGILR
Sbjct: 190 VLTSYPYQDPHNVGIMTSYGPQAMVHPHLFGMHQPRMPLPLEMEEEPVYVNAKQYHGILR 249

Query: 193 RRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVNTKKLDSQTSNGTVTNGT 252
           RRQ RAKAELE+K IKVRKPYLHESRH HAMRRARGCGGRF+NTKKLD+  +N T   G+
Sbjct: 250 RRQSRAKAELEKKAIKVRKPYLHESRHQHAMRRARGCGGRFLNTKKLDNNDANTTAEKGS 309

Query: 253 SLNVAVSTLPPNSSKSESVATNYSRGTADLSTGCREVTEPQVHKMQQQQRCSNGNGQTYY 312
               A+ST   +SS SE + TN SR   D S+  +E     +  M +    SNGN     
Sbjct: 310 VSGAALSTQSASSSGSEHLPTNSSR-NLDSSSVQQEEKGRTIQDMLEAHTYSNGN----- 363

Query: 313 EGNGNGCYSHHQGFQLFKCHSLPDNKVEEGDFSGQQSGRIVENRAQHRALTIK 365
             NG+G  S +        HS   N  E GD  GQ    +  N A HRAL IK
Sbjct: 364 -RNGHGLSSAY--------HS--SNGSEGGDCFGQPRENMQLNTAPHRALPIK 405

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359478376|ref|XP_002282778.2| PREDICTED: nuclear transcription factor Y subunit A-1 [Vitis vinifera]

 Score =  241 bits (615), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 148/319 (46%), Positives = 194/319 (60%), Gaps = 11/319 (3%)

Query: 11  SNSSGPE----ANSNNSFTISSQPWWRGVGHDSTSRAMLQGGIGNISSPREPINGVLVAK 66
           SNS GP      ++    ++ S+PWWRGVG++  S  M  G   N  S   P NG   + 
Sbjct: 3   SNSKGPNQIGPPHTAPPSSVYSEPWWRGVGYNPISTTMTGGNTNNSPSSECP-NGGSESN 61

Query: 67  TSKSQVNSGM-DGGADATKEMLMSVASQADGKFGGQ-QPSQHSVSLMHPQFSEYLTQPSQ 124
             +S  N G+ +   D+ KE   + +SQ++G +G + Q  QH    +    SE LTQP Q
Sbjct: 62  DGQSHSNGGLNEEDDDSIKESQATASSQSNGNYGQEHQNLQHIAPNIQIGSSECLTQPPQ 121

Query: 125 LELVGHSIACASYPYSDSYYGGAVPAYGQQALVHPQSMGVHSARMALPLEMAEEPVYVNA 184
           LELVGHSIACAS PY D YYGG + AYG Q LVHP  +G+H ARM LPLEM ++PVYVN 
Sbjct: 122 LELVGHSIACASNPYQDPYYGGMMTAYGPQPLVHPHLLGMHEARMPLPLEMTQDPVYVNP 181

Query: 185 KQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVNTKKLDSQTS 244
           KQYHGILRRRQ RAKAELE+KLIKVRKPYLHESRH HA+RRAR  GGRF      ++ + 
Sbjct: 182 KQYHGILRRRQSRAKAELEKKLIKVRKPYLHESRHQHALRRARSSGGRFAKKSAAEA-SK 240

Query: 245 NGTVTNGTSLNVAVSTLPPNSSKSESVATNYSRGTADLSTGCREVTEPQVHKMQQQQRCS 304
           + +    T+L  A S    +SS SE + ++ S  T + S+  +E   PQ H   +  +  
Sbjct: 241 HASEEKVTALGSAPSPQSVSSSGSERLPSD-STETWNSSSRQQEARGPQAHDTHEPPKYK 299

Query: 305 NGNGQTYYEGNGNGCYSHH 323
           NG+G  YY+  G+   ++H
Sbjct: 300 NGSG--YYQSPGDSQTTNH 316

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255553570|ref|XP_002517826.1| Nuclear transcription factor Y subunit A-1, putative [Ricinus communis] gi|223543098|gb|EEF44633.1| Nuclear transcription factor Y subunit A-1, putative [Ricinus communis]

 Score =  240 bits (613), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 144/305 (47%), Positives = 185/305 (60%), Gaps = 23/305 (7%)

Query: 25  TISSQPWWRGVGHDSTSRAMLQGGIGNISSPREPINGVLVAKTSKSQVNSGMDGGADATK 84
           +I SQPWWRGVG+ ST            SS  + +NG L     +SQ N  +D GA++ K
Sbjct: 20  SIYSQPWWRGVGNSSTFEESTS-----KSSSSDHLNGSLSNGPIRSQANLTLDNGANSNK 74

Query: 85  EMLMSVASQADGKFG-----GQQPSQHSVSLMHPQFSEYLTQPSQLELVGHSIACASYPY 139
           +  ++V+SQ+DG  G      Q PS   V+++      ++   SQ+ELVGHSI   SYPY
Sbjct: 75  DTQVAVSSQSDGINGQGHHLKQVPSSAPVTMV-----GHVEPNSQMELVGHSIVLTSYPY 129

Query: 140 SDSYYGGAVPAYGQQALVHPQSMGVHSARMALPLEMAEEPVYVNAKQYHGILRRRQLRAK 199
           SD+ YGG +P+Y  QA+V PQ  G+H ARMALPLEM EEPVYVNAKQ++GILRRRQ RAK
Sbjct: 130 SDAQYGGMLPSYAPQAMVTPQLYGMHHARMALPLEMEEEPVYVNAKQFNGILRRRQARAK 189

Query: 200 AELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVNTKKLDSQTSNGTVTNGTSLNVAVS 259
           AE+E+K IK RKPYLHESRH HAMRRARGCGGRF+++KK +S T N    N  +  +  S
Sbjct: 190 AEIEKKAIKARKPYLHESRHQHAMRRARGCGGRFLSSKKPESNTKNPASDNDVNSCINAS 249

Query: 260 TLPPNSSKSESVATNYSRGTADLSTGCREVTEPQVHKMQQQQRC-SNGNGQ----TYYEG 314
           T     + SE +  N   GT +L +   E      H MQ       NGNG      Y+  
Sbjct: 250 TRSAILTGSEWLQKN---GTRNLDSANGEGKGSTDHDMQSHSSSHGNGNGHGLSSIYHPS 306

Query: 315 NGNGC 319
           +G+G 
Sbjct: 307 SGDGL 311

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147834809|emb|CAN70549.1| hypothetical protein VITISV_002755 [Vitis vinifera]

 Score =  237 bits (604), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 148/318 (46%), Positives = 192/318 (60%), Gaps = 8/318 (2%)

Query: 8   NKSSNSSGPEANSNNSFTISSQPWWRGVGHDSTSRAMLQGGIGNISSPREPINGVLVAKT 67
           +K  N  GP   +  S ++ S+PWWRGVG++  S  M  G   N  S   P NG   +  
Sbjct: 106 SKGPNQIGPPHTAPPS-SVYSEPWWRGVGYNPISTTMTGGNTNNSPSSECP-NGGSESND 163

Query: 68  SKSQVNSGM-DGGADATKEMLMSVASQADGKFGGQ-QPSQHSVSLMHPQFSEYLTQPSQL 125
            +S  N G+ +   D+ KE   + +SQ++G +G + Q  QH    +    SE LTQP QL
Sbjct: 164 GQSHSNGGLNEEDDDSIKESQATASSQSNGNYGQEHQNLQHIAPNIQIGSSECLTQPPQL 223

Query: 126 ELVGHSIACASYPYSDSYYGGAVPAYGQQALVHPQSMGVHSARMALPLEMAEEPVYVNAK 185
           ELVGHSIACAS PY D YYGG + AYG Q LVHP  +G+H ARM LPLEM ++PVYVN K
Sbjct: 224 ELVGHSIACASNPYQDPYYGGMMTAYGPQPLVHPHLLGMHEARMPLPLEMTQDPVYVNPK 283

Query: 186 QYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVNTKKLDSQTSN 245
           QYHGILRRRQ RAKAELE+KLIKVRKPYLHESRH HA+RRAR  GGRF         + +
Sbjct: 284 QYHGILRRRQSRAKAELEKKLIKVRKPYLHESRHQHALRRARSSGGRFAKKXA-AEASKH 342

Query: 246 GTVTNGTSLNVAVSTLPPNSSKSESVATNYSRGTADLSTGCREVTEPQVHKMQQQQRCSN 305
            +    T+L  A S    +SS SE + ++ S  T + S+  +E   PQ H   +  +  N
Sbjct: 343 ASEEKVTALGSAPSPQSVSSSGSERLPSD-STETWNSSSRQQEARGPQAHDTHEPPKYKN 401

Query: 306 GNGQTYYEGNGNGCYSHH 323
           G+G  YY+  G+   ++H
Sbjct: 402 GSG--YYQSPGDSQTTNH 417

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255544876|ref|XP_002513499.1| Nuclear transcription factor Y subunit A-1, putative [Ricinus communis] gi|223547407|gb|EEF48902.1| Nuclear transcription factor Y subunit A-1, putative [Ricinus communis]

 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 152/345 (44%), Positives = 190/345 (55%), Gaps = 19/345 (5%)

Query: 24  FTISSQPWWRGVGHDSTSRAMLQGGIGNISSPREPINGVLVAKTSKSQVNSGMDGGADAT 83
           + + S+PWWR +G+ + SRA+  G   N+SS   P NG L +   +S  N  ++   D  
Sbjct: 22  YAVHSEPWWRTIGYSTVSRALAGGNASNLSSSEGP-NGSL-SNDDQSMSNGRLNEEDDDA 79

Query: 84  KEMLMSVASQADGKFGGQQPS--QHSVSLMHPQFSEYLTQPSQLELVGHSIACASYPYSD 141
            +   + AS      GGQ+    QH    M     E LTQP+QLELVGHSIACAS PY D
Sbjct: 80  SKESQATASSRSVLNGGQENRNLQHVAPSMTAMRDEGLTQPTQLELVGHSIACASNPYQD 139

Query: 142 SYYGGAVPAYGQQALVHPQSMGVHSARMALPLEMAEEPVYVNAKQYHGILRRRQLRAKAE 201
            YYGG +  YG Q L +P  +G H  RMALP E+A+EPVYVNAKQY GILRRRQ RAKAE
Sbjct: 140 PYYGGMMAPYGHQPLGYP-FLGGHQVRMALPNEIAQEPVYVNAKQYPGILRRRQARAKAE 198

Query: 202 LERKLIKVRKPYLHESRHLHAMRRARGCGGRFV-NTKKLDSQTSNGTVTNGTSLNVAVST 260
            E+KLIKVRKPYLHESRH HAMRRARG GGRF   T   DS+ +     N T    A+ +
Sbjct: 199 HEKKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKTGGDDSKNNKEGTANDTG---AIPS 255

Query: 261 LPPNSSKSESVATNYSRGTADLSTGCREVTEPQVHKMQQQQRCSNGNGQTYYEGNGNGCY 320
               SS       + S  T +L  G +E+   +V+   + +   NG             Y
Sbjct: 256 SQSGSSSGSEQLPSDSAQTWNLPHGDQELRSARVYDTSEARNHINGGSH----------Y 305

Query: 321 SHHQGFQLFKCHSLPDNKVEEGDFSGQQSGRIVENRAQHRALTIK 365
            +H G Q  K H     K E+ D SGQQ G I  N+   R L I+
Sbjct: 306 QNHSGLQTLKHHPHSGEKGEDEDCSGQQRGSISSNQVSQRPLAIQ 350

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224104075|ref|XP_002313307.1| predicted protein [Populus trichocarpa] gi|222849715|gb|EEE87262.1| predicted protein [Populus trichocarpa]

 Score =  234 bits (598), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 152/362 (41%), Positives = 199/362 (54%), Gaps = 36/362 (9%)

Query: 3   RSMHQNKSSNSSGPEANSNNSFTISSQPWWRGVGHDSTSRAMLQGGIGNISSPREPINGV 62
           +S  +++  + SGP     N   I SQPWWR VG+ S+      G   +  S  E +NG 
Sbjct: 4   KSEKEDRRLDHSGPSPFQTN---IYSQPWWRDVGNSSS-----LGDTASKLSSVEHLNGS 55

Query: 63  LVAKTSKSQVNSGMDGGADATKEMLMSVASQADGKFGGQQPSQHSVSLMHPQFSEYLTQP 122
           L     +SQVN+G+  GA   K+M   V SQ+D     +   +H  S        +L   
Sbjct: 56  LANAAIQSQVNTGLQKGAMVNKDMQTDVTSQSDESNEQEHHLKHIPSPTTVTMGGHLEPN 115

Query: 123 SQLELVGHSIACASYPYSDSYYGGAVPAYGQQALVHPQSMGVHSARMALPLEMAEEPVYV 182
           SQ+ELVGHSI   S+PY+D  YGG   +YG QA+V PQ  G+  ARM LPLEM EEPVYV
Sbjct: 116 SQMELVGHSIVLTSHPYTDPQYGGMFASYGAQAMV-PQLYGMPHARMPLPLEMEEEPVYV 174

Query: 183 NAKQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVNTKKLDSQ 242
           NAKQ+HGI+RRRQ RAKAELE+K +KVRKPYLHESRH HA+RRARGCGGRF+NTKKLD+ 
Sbjct: 175 NAKQFHGIMRRRQARAKAELEKKAVKVRKPYLHESRHQHALRRARGCGGRFLNTKKLDNS 234

Query: 243 TSNGTVTNGTSLNVAVSTLPPNSSKSESVATNYSRGTADLSTGCREVTEPQVHKMQQQQR 302
            +N T   G +    +S    + S SE   T    G+ DL++         + + +  Q 
Sbjct: 235 ATNPTSEKGINSVANISKQSYSFSVSECFPT---EGSGDLNSSG------DLEEGKGSQA 285

Query: 303 CSNGNGQTYYEGNGNGCYSHHQGFQLFKCHSLPDNKVEEGDFSGQQSGRIVENRAQHRAL 362
            SNG+      GNG+   S +             +   +G F GQQ      NR +  AL
Sbjct: 286 SSNGH------GNGHALSSRYH------------SSSHDGSFLGQQKETTHGNREKLEAL 327

Query: 363 TI 364
            +
Sbjct: 328 AM 329

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|343157308|gb|AEL95437.1| CCAAT-binding transcription factor subunit B [Populus euphratica]

 Score =  230 bits (586), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 124/232 (53%), Positives = 152/232 (65%), Gaps = 16/232 (6%)

Query: 26  ISSQPWWRGVGH-----DSTSRAMLQGGIGNISSPREPINGVLVAKTSKSQVNSGMDGGA 80
           I SQPWWR VG+     D+ S+      +GN+       NG L     +SQVN+G+  GA
Sbjct: 24  IYSQPWWRDVGNSPSLGDTASKL---SSVGNL-------NGSLANAAIQSQVNTGLQKGA 73

Query: 81  DATKEMLMSVASQADGKFGGQQPSQHSVSLMHPQFSEYLTQPSQLELVGHSIACASYPYS 140
              K+M   V SQ+D   G +   +H  S        +L   SQ+ELVGHSI   S+PY+
Sbjct: 74  MVNKDMQTDVTSQSDESNGQEHHLKHIPSPTTVTMGGHLEPNSQMELVGHSIVLTSHPYT 133

Query: 141 DSYYGGAVPAYGQQALVHPQSMGVHSARMALPLEMAEEPVYVNAKQYHGILRRRQLRAKA 200
           D  +GG   +YG QA+V PQ  G+  ARM LPLEM EEPVYVNAKQ+HGI+RRRQ RAKA
Sbjct: 134 DPQHGGMFASYGAQAMV-PQLYGMPQARMPLPLEMEEEPVYVNAKQFHGIMRRRQARAKA 192

Query: 201 ELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVNTKKLDSQTSNGTVTNGT 252
           ELE+K +KVRKPYLHESRH HAMRRARGCGGRF+NTKKLD+ T+N T   G+
Sbjct: 193 ELEKKAVKVRKPYLHESRHQHAMRRARGCGGRFLNTKKLDNNTTNPTSEKGS 244

Source: Populus euphratica

Species: Populus euphratica

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356527208|ref|XP_003532204.1| PREDICTED: nuclear transcription factor Y subunit A-1-like isoform 1 [Glycine max]

 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 181/330 (54%), Gaps = 27/330 (8%)

Query: 26  ISSQPWWRGVGHDSTSRAMLQGGIGNISSPREPINGVLVAKTSKSQVNSGM-DGGADATK 84
           + S+PWWRG+G++  ++ M      N SS   P       +  +S  NSGM +   DATK
Sbjct: 23  VYSEPWWRGIGYNPMAQTMAGANASNSSSLECPNGDSESNEEGQSLSNSGMNEEDDDATK 82

Query: 85  EMLMSVASQADGKFGGQQPSQHSVSLMHPQFSEYLTQPSQLELVGHSIACASYPYSDSYY 144
           +   +  ++       QQ  QH+ S       E LTQ  QLELVGHSIAC++ PY D YY
Sbjct: 83  DSKPAAPNETGNYEQEQQGMQHTASSPPSMREECLTQTPQLELVGHSIACSTNPYQDPYY 142

Query: 145 GGAVPAYGQQALVHPQSMGVHSARMALPLEMAEEPVYVNAKQYHGILRRRQLRAKAELER 204
           GG + AYG Q L +   +G+  ARM LPLEMA+EPVYVNAKQY GILRRRQ RAKAELER
Sbjct: 143 GGMMAAYGHQQLGYAPFIGMPHARMPLPLEMAQEPVYVNAKQYQGILRRRQARAKAELER 202

Query: 205 KLIKVRKPYLHESRHLHAMRRARGCGGRFVNTKKLDSQTSN---GTVTNGTSLNVAVSTL 261
           KLIK RKPYLHESRH HAMRRARG GGRF   KK D + SN       NGT    ++S+ 
Sbjct: 203 KLIKSRKPYLHESRHQHAMRRARGTGGRFA--KKTDGEGSNHLGKEKDNGTDSVQSISSS 260

Query: 262 PPNSSKSESVATNYSRGTADLSTGCREVTEPQVHKMQQQQRCS---NGNGQTYYEGNGNG 318
                 S+S  T  S                    MQQ  R S   N   +     NG+G
Sbjct: 261 GSEPLHSDSAETWNSP------------------NMQQDARASKVHNSRFEAPSYQNGSG 302

Query: 319 CYSHHQGFQLFKCHSLPDNKVEEGDFSGQQ 348
            Y +H G Q    HS    +VEE D SGQQ
Sbjct: 303 SYHNHNGLQSSVYHSSSGERVEERDCSGQQ 332

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	365
TAIR|locus:2182245	272	NF-YA1 ""nuclear factor Y, sub	0.695	0.933	0.430	1.2e-42
TAIR|locus:2088791	303	NF-YA9 ""nuclear factor Y, sub	0.756	0.910	0.376	1.3e-36
TAIR|locus:2028150	190	NF-YA7 ""nuclear factor Y, sub	0.380	0.731	0.507	2.6e-31
TAIR|locus:2014375	308	NF-YA5 ""nuclear factor Y, sub	0.347	0.412	0.5	8.2e-28
TAIR|locus:2007953	328	NF-YA8 ""nuclear factor Y, sub	0.282	0.314	0.567	1.3e-27
TAIR|locus:2088232	308	NF-YA6 ""nuclear factor Y, sub	0.495	0.587	0.411	1.7e-27
TAIR|locus:2061534	198	NF-YA4 ""nuclear factor Y, sub	0.372	0.686	0.473	2.2e-27
TAIR|locus:2032758	341	NF-YA3 ""nuclear factor Y, sub	0.594	0.636	0.372	3.5e-27
TAIR|locus:2078072	295	NF-YA2 ""nuclear factor Y, sub	0.405	0.501	0.422	1.1e-25
TAIR|locus:2144113	269	NF-YA10 ""nuclear factor Y, su	0.430	0.583	0.417	1.8e-23

TAIR|locus:2182245 NF-YA1 ""nuclear factor Y, subunit A1"" [Arabidopsis thaliana (taxid:3702)]

 Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
 Identities = 118/274 (43%), Positives = 151/274 (55%)

Query:     7 QNKSSNSSGPEANSNNSFT---ISSQPWWRGVGHDSTSRAMLQGGIGNISSPREPINGVL 63
             Q+K    +  E N++++     + ++PWW+        +A   G   N SS   P NG  
Sbjct:     2 QSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCP-NGSE 60

Query:    64 VAKTSKSQVNSGMDGGADAT-KEMLMSVASQADGKFG--GQQPSQHSVSLMHPQFSEYLT 120
                   +  +  ++G  D T K+   + +S++    G  G  P+  S+  MH Q    L 
Sbjct:    61 SNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPAL-SIRNMHDQ---PLV 116

Query:   121 QPSQLELVGHSIACASYPYSDSYYGGAVPAYGQQALVHPQSMGVHSARMALPLEMAEEPV 180
             QP   ELVGH IAC   PY D YYGG + AYG Q L     +G+   R ALPL+MA+EPV
Sbjct:   117 QPP--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPV 174

Query:   181 YVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVNTKKLD 240
             YVNAKQY GILRRR+ RAKAELERK+I+ RKPYLHESRH HAMRRAR  GGRF   KK  
Sbjct:   175 YVNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFA--KK-- 230

Query:   241 SQTSNGTVTNGTSLNVAVSTLPPNSSKSESVATN 274
             S+   G    G       +T   NSS SE V T+
Sbjct:   231 SEVEAGEDAGGRDRERGSAT---NSSGSEQVETD 261

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;IGI;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS

GO:0009793 "embryo development ending in seed dormancy" evidence=NAS

GO:0016602 "CCAAT-binding factor complex" evidence=IEA;ISS

GO:0048510 "regulation of timing of transition from vegetative to reproductive phase" evidence=IMP

GO:0009790 "embryo development" evidence=IMP

GO:0010262 "somatic embryogenesis" evidence=IMP

GO:0048316 "seed development" evidence=IMP

GO:0055046 "microgametogenesis" evidence=IMP

TAIR|locus:2088791 NF-YA9 ""nuclear factor Y, subunit A9"" [Arabidopsis thaliana (taxid:3702)]

 Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
 Identities = 116/308 (37%), Positives = 160/308 (51%)

Query:     2 LRSMHQNKSS--NSSGPEANSNNSFTISS-QPWWRGVGHDSTSRAMLQGGIGNISSPREP 58
             +  MH    S  N    E +   S +I+S  PW R     + + ++     G+ SS  + 
Sbjct:     3 IEDMHSKSDSGGNKVDSEVHGTVSSSINSLNPWHRAAAACNANSSV---EAGDKSS--KS 57

Query:    59 INGVLVAKTSKSQVNSGMDGGADATKEMLMSVASQADGKFGGQQPSQHSVSLMHPQFSEY 118
             I   L +  SKS  N   D   +  KE  ++ + Q+ G +      ++  SL H      
Sbjct:    58 IALALESNGSKSPSNR--DNTVN--KESQVTTSPQSAGDYS----DKNQESLHHG----- 104

Query:   119 LTQPS-QLELVGHSIACASY-PYSDSYYGGAVPAYGQQALVHPQSMGVHSARMALPLEMA 176
             +TQP    +LVGH++  AS  PY D YY G + AYG   L      G+  +RM LP EMA
Sbjct:   105 ITQPPPHPQLVGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRMPLPPEMA 164

Query:   177 EEPVYVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVNT 236
             +EPV+VNAKQY  ILRRRQ RAKAELE+KLIK RKPYLHESRH HAMRR RG GGRF   
Sbjct:   165 QEPVFVNAKQYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRFA-- 222

Query:   237 KKLDSQTSNGTVTNGTSLNVAVSTLPPNSSKSESVATNYSRGTADLSTGCREVTEPQVHK 296
             KK +++ S       ++ +V  S  P +S+  +  A N      D  T   +  +   +K
Sbjct:   223 KKTNTEASKRKAEEKSNGHVTQS--PSSSNSDQGEAWN-----GDYRTPQGDEMQSSAYK 275

Query:   297 MQQQQRCS 304
              +++  CS
Sbjct:   276 RREEGECS 283

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS

GO:0016602 "CCAAT-binding factor complex" evidence=IEA;ISS

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0009555 "pollen development" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

GO:0009790 "embryo development" evidence=IMP

GO:0010262 "somatic embryogenesis" evidence=IMP

GO:0048316 "seed development" evidence=IMP

GO:0055046 "microgametogenesis" evidence=IMP

TAIR|locus:2028150 NF-YA7 ""nuclear factor Y, subunit A7"" [Arabidopsis thaliana (taxid:3702)]

 Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
 Identities = 71/140 (50%), Positives = 88/140 (62%)

Query:   130 HSIACASYPYSDSYYGGA-VPAYGQQALVHPQSMGVHSARMALPLEMAEEPVYVNAKQYH 188
             +S+A   YPY D YY     P       VH Q MGV    + LP +  EEPV+VNAKQYH
Sbjct:    51 NSMAPGQYPYPDPYYRSIFAPPPQPYTGVHLQLMGVQQQGVPLPSDAVEEPVFVNAKQYH 110

Query:   189 GILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVNTKKLDSQTSNGTV 248
             GILRRRQ RA+ E + K+IK RKPYLHESRHLHA+RR RGCGGRF+N KK D    + + 
Sbjct:   111 GILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKKEDEHHEDSSH 170

Query:   249 TNGTSLNVAVSTLPPNSSKS 268
                ++L+   S +  +S  S
Sbjct:   171 EEKSNLSAGKSAMAASSGTS 190

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0016602 "CCAAT-binding factor complex" evidence=ISS

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=RCA;IDA

GO:0016036 "cellular response to phosphate starvation" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

TAIR|locus:2014375 NF-YA5 ""nuclear factor Y, subunit A5"" [Arabidopsis thaliana (taxid:3702)]

 Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
 Identities = 68/136 (50%), Positives = 91/136 (66%)

Query:   128 VGHSIACASYPYSDSYYGGAVPAYGQQ--ALVHPQSMGVHSARMALPLEMAE-EPVYVNA 184
             +  S+ CA    +  + G   P Y     AL H + MG+ S+R+ LP  + E EP++VNA
Sbjct:   128 ISWSLQCAE---TSHFNGFLAPEYASTPTALPHLEMMGLVSSRVPLPHHIQENEPIFVNA 184

Query:   185 KQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVNTKKL-DSQT 243
             KQYH ILRRR+ RAK E + KLIK RKPYLHESRHLHA++RARG GGRF+NTKKL +S  
Sbjct:   185 KQYHAILRRRKHRAKLEAQNKLIKCRKPYLHESRHLHALKRARGSGGRFLNTKKLQESSN 244

Query:   244 S--NGTVTNGTSLNVA 257
             S  +  + NG + +++
Sbjct:   245 SLCSSQMANGQNFSMS 260

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS

GO:0016602 "CCAAT-binding factor complex" evidence=IEA;ISS

GO:0009738 "abscisic acid mediated signaling pathway" evidence=IMP

GO:0009785 "blue light signaling pathway" evidence=IMP

GO:0009414 "response to water deprivation" evidence=IMP

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=RCA;IDA

GO:0016036 "cellular response to phosphate starvation" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0009790 "embryo development" evidence=IMP

GO:0010262 "somatic embryogenesis" evidence=IMP

GO:0048316 "seed development" evidence=IMP

TAIR|locus:2007953 NF-YA8 ""nuclear factor Y, subunit A8"" [Arabidopsis thaliana (taxid:3702)]

 Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
 Identities = 63/111 (56%), Positives = 81/111 (72%)

Query:   136 SYPYSDSYYGGAVPA-YGQQALV-HPQSMGVHSARMALPLEMAE-EPVYVNAKQYHGILR 192
             S+ Y+D ++GG +PA Y  QA + +PQ       R+ LP ++ E EPV+VNAKQ+H I+R
Sbjct:   132 SFHYADPHFGGLMPAAYLPQATIWNPQM-----TRVPLPFDLIENEPVFVNAKQFHAIMR 186

Query:   193 RRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVNTKKLDSQT 243
             RRQ RAK E + KLIK RKPYLHESRH+HA++R RG GGRF+NTKKL   T
Sbjct:   187 RRQQRAKLEAQNKLIKARKPYLHESRHVHALKRPRGSGGRFLNTKKLQEST 237

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0016602 "CCAAT-binding factor complex" evidence=IEA;ISS

TAIR|locus:2088232 NF-YA6 ""nuclear factor Y, subunit A6"" [Arabidopsis thaliana (taxid:3702)]

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 81/197 (41%), Positives = 112/197 (56%)

Query:   112 HPQFSEYLTQPSQLELVGHSIACASYPYSDS---YYGG--AVPAYGQQALVHPQSMGVHS 166
             +P  S  +++ SQ  +V   I  AS+P   +   ++ G  + P   Q  + HPQ  G+  
Sbjct:   100 NPIGSHSISKVSQDSVV-LPIEAASWPLHGNVTPHFNGFLSFPYASQHTVQHPQIRGLVP 158

Query:   167 ARMALPLEMAE-EPVYVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRR 225
             +RM LP  + E EP++VNAKQY  ILRRR+ RAK E + KLIKVRKPYLHESRHLHA++R
Sbjct:   159 SRMPLPHNIPENEPIFVNAKQYQAILRRRERRAKLEAQNKLIKVRKPYLHESRHLHALKR 218

Query:   226 ARGCGGRFVNTKKLDSQTSNGTVTNGTSLNVAVSTLPPNSSKSESVATNYSRG--TADLS 283
              RG GGRF+NTKK   Q SN +++    +   V    P   +   +    SRG   + +S
Sbjct:   219 VRGSGGRFLNTKK--HQESNSSLSPPFLIPPHVFKNSPGKFRQMDI----SRGGVVSSVS 272

Query:   284 T-GCREVTEPQVHKMQQ 299
             T  C ++T       QQ
Sbjct:   273 TTSCSDITGNNNDMFQQ 289

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS

GO:0016602 "CCAAT-binding factor complex" evidence=IEA;ISS

GO:0009790 "embryo development" evidence=IMP

GO:0010262 "somatic embryogenesis" evidence=IMP

GO:0048316 "seed development" evidence=IMP

TAIR|locus:2061534 NF-YA4 ""nuclear factor Y, subunit A4"" [Arabidopsis thaliana (taxid:3702)]

 Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
 Identities = 71/150 (47%), Positives = 90/150 (60%)

Query:   137 YPYSDSYYGGAVPAYGQQA-LVHP------QSMGVHSARMALPLEMAEEPVYVNAKQYHG 189
             YPY D YY      + QQA L HP      Q MG+    + L  +  EEPV+VNAKQYHG
Sbjct:    53 YPYPDPYYRSV---FAQQAYLPHPYPGVQLQLMGMQQPGVPLQCDAVEEPVFVNAKQYHG 109

Query:   190 ILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVNTKKLDSQ-TSNGTV 248
             ILRRRQ RAK E   + IK +KPY+HESRHLHA+RR RGCGGRF+N KK +         
Sbjct:   110 ILRRRQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKKENGDHKEEEEA 169

Query:   249 TNGTSLNVAVSTLPPNSSKSESVATNYSRG 278
             T+  + + A S+L    S+  ++AT+   G
Sbjct:   170 TSDENTSEASSSL---RSEKLAMATSGPNG 196

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0016602 "CCAAT-binding factor complex" evidence=IEA;ISS

GO:0048510 "regulation of timing of transition from vegetative to reproductive phase" evidence=IMP

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0009411 "response to UV" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009739 "response to gibberellin stimulus" evidence=RCA

GO:0009751 "response to salicylic acid stimulus" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009813 "flavonoid biosynthetic process" evidence=RCA

GO:0010264 "myo-inositol hexakisphosphate biosynthetic process" evidence=RCA

GO:0046686 "response to cadmium ion" evidence=RCA

TAIR|locus:2032758 NF-YA3 ""nuclear factor Y, subunit A3"" [Arabidopsis thaliana (taxid:3702)]

 Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
 Identities = 89/239 (37%), Positives = 125/239 (52%)

Query:    19 NSNNSFTISSQPW------WRGVGHDSTSRAMLQGGIGNISSPREPINGVLVAKTSKSQV 72
             N  +S T S+ P+      W  V  DS +    +G   ++S   +   G +  +T+K   
Sbjct:     7 NKKDSATHSTLPYLNTSISWGVVPTDSVANR--RGSAESLSLKVDSRPGHI--QTTKQIS 62

Query:    73 NSGMDGGA-DATKEMLMSVASQADGKFGGQQPSQHSVSLMHPQFSEYLTQPSQLELVG-- 129
                 D  +  +T +    VAS  D     Q            Q   + + P Q  + G  
Sbjct:    63 FQDQDSSSTQSTGQSYTEVASSGDDNPSRQISFSAKSGSEITQRKGFASNPKQGSMTGFP 122

Query:   130 --H---SIACASYPYSDSYYGGAVPA-YGQQA-LVHPQSMGVHSARMALPLEMAE-EPVY 181
               H   + A  S+ Y+D +YGG + A Y  QA   +PQ + +   R+ LP E+ E +PV+
Sbjct:   123 NIHFAPAQANFSFHYADPHYGGLLAATYLPQAPTCNPQMVSMIPGRVPLPAELTETDPVF 182

Query:   182 VNAKQYHGILRRRQLRAKAELERKLIKVRK-PYLHESRHLHAMRRARGCGGRFVNTKKL 239
             VNAKQYH I+RRRQ RAK E + KLI+ RK PYLHESRH+HA++R RG GGRF+NTKKL
Sbjct:   183 VNAKQYHAIMRRRQQRAKLEAQNKLIRARKVPYLHESRHVHALKRPRGSGGRFLNTKKL 241

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;IGI;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0016602 "CCAAT-binding factor complex" evidence=IEA;ISS

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2078072 NF-YA2 ""nuclear factor Y, subunit A2"" [Arabidopsis thaliana (taxid:3702)]

 Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
 Identities = 71/168 (42%), Positives = 93/168 (55%)

Query:   137 YPYSDSYYGGAVPAYGQQALVHPQSMGVHSARMALPLEMAEEP--VYVNAKQYHGILRRR 194
             YPY +  Y G V AYG Q+            R+ LPL M  E   +YVN+KQYHGI+RRR
Sbjct:   105 YPYGEQQYYGVVSAYGSQS------------RVMLPLNMETEDSTIYVNSKQYHGIIRRR 152

Query:   195 QLRAKAE--LERKLI--KVRKPYLHESRHLHAMRRARGCGGRFVNTKKLDSQTSNGTVTN 250
             Q RAKA   L++K +  + RKPY+H SRHLHA+RR RG GGRF+NTK  + + S      
Sbjct:   153 QSRAKAAAVLDQKKLSSRCRKPYMHHSRHLHALRRPRGSGGRFLNTKSQNLENSGTNAKK 212

Query:   251 GT-SLNVAVSTLPPNSSKSESVATNYSRGTADLSTGCREVTEPQVHKM 297
             G  S+ +     P  S+   S   +   GT +LS G   V+  +V  M
Sbjct:   213 GDGSMQIQSQPKPQQSNSQNSEVVHPENGTMNLSNGLN-VSGSEVTSM 259

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;IGI;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0016602 "CCAAT-binding factor complex" evidence=ISS

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IMP

TAIR|locus:2144113 NF-YA10 ""nuclear factor Y, subunit A10"" [Arabidopsis thaliana (taxid:3702)]

 Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
 Identities = 76/182 (41%), Positives = 99/182 (54%)

Query:    99 GGQQPSQHSVSLMHPQFSEYLTQPSQLEL-VGHSIACASYPYSDSYYGGAVPAYGQQALV 157
             GG++ S+  V   H  F+    Q +  E      +    +P+ + YYG  V AYG Q   
Sbjct:    65 GGEKSSR-DVPKPHVAFA---MQSACFEFGFAQPMMYTKHPHVEQYYG-VVSAYGSQ--- 116

Query:   158 HPQSMGVHSARMALPLEMAEEP---VYVNAKQYHGILRRRQLRAKAELERKLIKVRKPYL 214
               +S G    R+ +PL+M  E    +YVN+KQYHGI+RRRQ RAKAE   KL + RKPY+
Sbjct:   117 --RSSG----RVMIPLKMETEEDGTIYVNSKQYHGIIRRRQSRAKAE---KLSRCRKPYM 167

Query:   215 HESRHLHAMRRARGCGGRFVNTKKLDSQTSNGTVTNGTSLNVAVSTLPPNSSKSESVATN 274
             H SRHLHAMRR RG GGRF+NTK  D+       +N  S  V     P N + + S   N
Sbjct:   168 HHSRHLHAMRRPRGSGGRFLNTKTADA-AKQSKPSNSQSSEVFH---PENETINSSREAN 223

Query:   275 YS 276
              S
Sbjct:   224 ES 225

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0016602 "CCAAT-binding factor complex" evidence=IEA;ISS

GO:0009718 "anthocyanin-containing compound biosynthetic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	365
pfam02045	57	pfam02045, CBFB_NFYA, CCAAT-binding transcription	3e-34
smart00521	62	smart00521, CBF, CCAAT-Binding transcription Facto	7e-34
COG5224	248	COG5224, HAP2, CCAAT-binding factor, subunit B [Tr	1e-10

>gnl|CDD|190198 pfam02045, CBFB_NFYA, CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B

 Score =  120 bits (303), Expect = 3e-34
 Identities = 46/57 (80%), Positives = 48/57 (84%)

Query: 177 EEPVYVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRF 233
           +EP+YVNAKQYH ILRRRQ RAK E E KLIK RKPYLHESRH HAMRR RG GGRF
Sbjct: 1   DEPIYVNAKQYHRILRRRQARAKLEAENKLIKSRKPYLHESRHKHAMRRPRGSGGRF 57

Length = 57

>gnl|CDD|128795 smart00521, CBF, CCAAT-Binding transcription Factor

 Score =  119 bits (300), Expect = 7e-34
 Identities = 49/62 (79%), Positives = 51/62 (82%)

Query: 175 MAEEPVYVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFV 234
             EEPVYVNAKQYH ILRRRQ RAK E + KL K RKPYLHESRHLHAMRR RG GGRF+
Sbjct: 1   AEEEPVYVNAKQYHRILRRRQARAKLEAQGKLPKERKPYLHESRHLHAMRRPRGSGGRFL 60

Query: 235 NT 236
           NT
Sbjct: 61  NT 62

Length = 62

>gnl|CDD|227549 COG5224, HAP2, CCAAT-binding factor, subunit B [Transcription]

 Score = 61.0 bits (147), Expect = 1e-10
 Identities = 49/199 (24%), Positives = 74/199 (37%), Gaps = 28/199 (14%)

Query: 49  IGNISSPREPINGVLVAKTSKSQVNSGMDGGADATK-EMLMSVASQADGKFGGQQPSQHS 107
           I N S    PIN    + +  +   SG +  +   + E+ MS          G  P  H 
Sbjct: 54  ISNSSESPAPINSATASMSPANN-TSGNNITSPNVRGELDMSSGPTNTASTSG--PVPHD 110

Query: 108 VSLMHPQFSEYLTQPSQLELVGHSIACASYPYSDSYYGGAVPAYGQQALVHPQSMGVHSA 167
           ++++    S      S    +G     ++   +              +  HP        
Sbjct: 111 MTVLPQTDSNTSNLMSSGSQLGSFATQSTNGNNS-------TTTTTSSAAHP-------- 155

Query: 168 RMALPLEMAEEPVYVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRAR 227
                   + +P YVNAKQ + I +R  LR    L+  +   R  YLHESRH HAM R R
Sbjct: 156 -------GSFQPDYVNAKQGNEISKRPGLRVY--LDDSVSAGRAFYLHESRHKHAMLRVR 206

Query: 228 GCGGRFVNTKKLDSQTSNG 246
              GRF+   ++D     G
Sbjct: 207 DPTGRFLTASEIDPLNLTG 225

Length = 248

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	365
KOG1561	307	consensus CCAAT-binding factor, subunit B (HAP2) [	100.0
smart00521	62	CBF CCAAT-Binding transcription Factor.	100.0
PF02045	58	CBFB_NFYA: CCAAT-binding transcription factor (CBF	100.0
COG5224	248	HAP2 CCAAT-binding factor, subunit B [Transcriptio	99.79

>KOG1561 consensus CCAAT-binding factor, subunit B (HAP2) [Transcription]

Probab=100.00  E-value=2.8e-45  Score=350.18  Aligned_cols=218  Identities=33%  Similarity=0.429  Sum_probs=150.5

Q ss_pred             CCCCcccCccccCCCCCCcccccccCCCCCC--CCCCCCCCcccccccccccccCCCCC-CCccccccccccccCC----
Q 017825           22 NSFTISSQPWWRGVGHDSTSRAMLQGGIGNI--SSPREPINGVLVAKTSKSQVNSGMDG-GADATKEMLMSVASQA----   94 (365)
Q Consensus        22 ~p~sv~S~PWW~~~G~~~~~~a~~g~~~s~~--ssS~e~~ng~~~~~~~ks~~~g~~~~-~~d~~k~sq~t~~~qs----   94 (365)
                      .-..+...|||+.++....+.....+-..++  +......+|.....+....+-+..++ .+.+.+++|++....+    
T Consensus        16 ~~~~~~q~~~~~~~~~~~~p~~~~s~~~~q~~~s~~~~s~~g~~~~~~~e~~~~~~~~~~~~~~~~~~~v~~s~~s~~~~   95 (307)
T KOG1561|consen   16 KRREARQKPEERGVQTTKKPYLHESGHKHQMGPGGRFLSADGVSKLRAQEAANGGSTGDDVNATNNDAQVAATVSSEVTH   95 (307)
T ss_pred             ccccccccccccccccccccccCcccccccccccccccCccccccccccccccccccccccccccccceeeeccCCccee
Confidence            3456778999998887765444443333332  22222224444433333222233322 2334477777766555    


Q ss_pred             CCCCCCCCCCccccccccCCCccccCCCCcc--ccccccccccc-CCCCCCccCCccc---ccCcccc--cCCCCcCcCC
Q 017825           95 DGKFGGQQPSQHSVSLMHPQFSEYLTQPSQL--ELVGHSIACAS-YPYSDSYYGGAVP---AYGQQAL--VHPQSMGVHS  166 (365)
Q Consensus        95 ~~~~g~~q~~q~~~s~~~~~~~~~~~~~~q~--el~g~s~a~~~-ypy~Dpyygg~~a---aYg~q~~--~~~~~~Gm~~  166 (365)
                      ...+....  +...+++....   ..+.+++  ..+.+..++++ +||.+|+|+|++.   +|++|++  ++++++||..
T Consensus        96 v~~~~~~~--~~~~~~~~~~~---~~~~~~~~~~a~~~~~~~~s~~~~~~p~~~g~~~~~~~y~~~~~~~~~~q~~g~~~  170 (307)
T KOG1561|consen   96 VEGYADSN--DSRPSSISNSS---ESPAPINSATASMSPANNTSGNPITSPHYRGVLDMSGAYSGQPTNTASTQYSGPVP  170 (307)
T ss_pred             cccccccc--ccccccccccc---cccCcccccccccccccccccCCCCCCcccceecccccccCCCCccccccccCCCC
Confidence            22222221  11111111111   1122333  34667777764 7999999999999   8999977  4788999987


Q ss_pred             -CcccCCCCCCC-CceeecchhhHHHHHHHHHHHHHHHhhhhhhcCCCccccchhhHhhhcCCCCCCccccccccCcCCC
Q 017825          167 -ARMALPLEMAE-EPVYVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVNTKKLDSQTS  244 (365)
Q Consensus       167 -~R~pLP~e~~e-ePvyVNaKQY~rIlrRR~~Rak~e~~~kl~k~rk~YlHESRH~HAm~R~Rg~gGRFl~~kk~~~~~~  244 (365)
                       .|+|||.++.| |||||||||||||||||++|||||+++||+|.||||||||||+|||||+||+||||||+|+..++.+
T Consensus       171 ~~r~pLP~~~~e~ePl~VNaKQY~~IlrRRq~RaKlEa~~klik~RkpYLHESRH~HAmkR~RG~GGRFln~k~~~~~ss  250 (307)
T KOG1561|consen  171 HDRTPLPQTDSETEPLYVNAKQYHRILRRRQARAKLEATTKLIKARKPYLHESRHLHAMKRARGEGGRFLNTKEYHDDSS  250 (307)
T ss_pred             cCcccCCccccCCCceeEcHHHHHHHHHHHHHHhhhhhcccchhhcCccccchhhHHHhhcccCCCCCCCchhhhhhhcc
Confidence             99999999976 9999999999999999999999999999999999999999999999999999999999999776543

>smart00521 CBF CCAAT-Binding transcription Factor

Probab=100.00  E-value=2.3e-36  Score=232.86  Aligned_cols=62  Identities=79%  Similarity=1.159  Sum_probs=60.2

Q ss_pred             CCCCceeecchhhHHHHHHHHHHHHHHHhhhhhhcCCCccccchhhHhhhcCCCCCCccccc
Q 017825          175 MAEEPVYVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVNT  236 (365)
Q Consensus       175 ~~eePvyVNaKQY~rIlrRR~~Rak~e~~~kl~k~rk~YlHESRH~HAm~R~Rg~gGRFl~~  236 (365)
                      ++++|||||||||++|||||++|||+|++++|++.||||||||||+|||+|+||+|||||++
T Consensus         1 ~~~~piyVNaKQy~~IlrRR~~Rak~e~~~kl~~~rkpYlhESRH~HAm~R~Rg~gGRFl~~   62 (62)
T smart00521        1 AEEEPVYVNAKQYHRILRRRQARAKLEAQGKLPKERKPYLHESRHLHAMRRPRGSGGRFLNT   62 (62)
T ss_pred             CCCcceeEcHHHHHHHHHHHHHHHHHHHhcchhhccCCcccchhHHHHHccCcCCCCCCCCC
Confidence            46899999999999999999999999999999999999999999999999999999999975

>PF02045 CBFB_NFYA: CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B; InterPro: IPR001289 The CCAAT-binding factor (CBFB/NF-YA) is a mammalian transcription factor that binds to a CCAAT motif in the promoters of a wide variety of genes, including type I collagen and albumin []

Probab=100.00  E-value=5.6e-34  Score=217.43  Aligned_cols=57  Identities=81%  Similarity=1.174  Sum_probs=56.2

Q ss_pred             CCceeecchhhHHHHHHHHHHHHHHHhhhh-hhcCCCccccchhhHhhhcCCCCCCcc
Q 017825          177 EEPVYVNAKQYHGILRRRQLRAKAELERKL-IKVRKPYLHESRHLHAMRRARGCGGRF  233 (365)
Q Consensus       177 eePvyVNaKQY~rIlrRR~~Rak~e~~~kl-~k~rk~YlHESRH~HAm~R~Rg~gGRF  233 (365)
                      |+|||||||||++|||||++|||+|+++|| ++.||||||||||+|||+|+||+||||
T Consensus         1 ~~piyVNaKQY~rIlrRR~~Rakle~~~k~~~~~rk~YlheSRH~HA~~R~Rg~gGRF   58 (58)
T PF02045_consen    1 EEPIYVNAKQYHRILRRRQARAKLEAEGKLSPKKRKPYLHESRHKHAMRRPRGPGGRF   58 (58)
T ss_pred             CCCeeECHHHHHHHHHHHHHHHHHHHhCCcchhhhHHHHHHHHHHHHHcCccCCCCCC
Confidence            689999999999999999999999999999 999999999999999999999999999

The factor is a heteromeric complex of A and B subunits, both of which are required for DNA-binding []. The subunits can interact in the absence of DNA-binding, conserved regions in each being important in mediating this interaction. The B subunit contains a region of similarity with the yeast protein HAP2 []. For the B subunit it has been suggested that the N-terminal portion of the conserved region is involved in subunit interaction and the C-terminal region involved in DNA-binding [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>COG5224 HAP2 CCAAT-binding factor, subunit B [Transcription]

Probab=99.79  E-value=2.8e-19  Score=166.18  Aligned_cols=66  Identities=42%  Similarity=0.571  Sum_probs=58.4

Q ss_pred             CCCceeecchhhHHHHHHHHHHHHHHHhhhhhhcCCCccccchhhHhhhcCCCCCCccccccccCcCC
Q 017825          176 AEEPVYVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVNTKKLDSQT  243 (365)
Q Consensus       176 ~eePvyVNaKQY~rIlrRR~~Rak~e~~~kl~k~rk~YlHESRH~HAm~R~Rg~gGRFl~~kk~~~~~  243 (365)
                      .++|.|||||||++|+|||-+|++++  .+|+-.|..|||||||+|||+|+|+++||||++.+++.-+
T Consensus       157 sfqp~Yvnakq~n~i~kr~~~r~~ld--~~~~~~r~~ylHesrhkham~r~r~ptgrfLtasEi~~ln  222 (248)
T COG5224         157 SFQPDYVNAKQGNEISKRPGLRVYLD--DSVSAGRAFYLHESRHKHAMLRVRDPTGRFLTASEIDPLN  222 (248)
T ss_pred             ccCcchhhhhhhhHHhcchhHHHHHH--HHhhhhhhhccccchhhhhhhcccCCCcceecHHhhhhhh
Confidence            57899999999999999999999865  5666777779999999999999999999999887776543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	365
4awl_A	78	The Nf-y Transcription Factor Is Structurally And F		1e-17
4g91_A	64	Ccaat-Binding Complex From Aspergillus Nidulans Len		7e-14

>pdb|4AWL|A Chain A, The Nf-y Transcription Factor Is Structurally And Functionally A Sequence Specific Histone Length = 78

Iteration: 1
 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 44/65 (67%), Positives = 50/65 (76%)
Query: 177 EEPVYVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVNT 236
           EEP+YVNAKQYH IL+RRQ RAK E E K+ K R+ YLHESRH HAM R RG GGRF + 
Sbjct: 2   EEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMARKRGEGGRFFSP 61
Query: 237 KKLDS 241
           K+ DS
Sbjct: 62  KEKDS 66

>pdb|4G91|A Chain A, Ccaat-Binding Complex From Aspergillus Nidulans Length = 64

Iteration: 1
 Score = 74.7 bits (182), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 39/59 (66%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
Query: 177 EEPVYVNAKQYHGILRRRQLRAKAELERKLI-KVRKPYLHESRHLHAMRRARGCGGRFV 234
           E P+YVNAKQ+H IL+RR  R K E + +L  K RKPYLHESRH HAMRR RG GGRF+
Sbjct: 2   ESPLYVNAKQFHRILKRRVARQKLEEQLRLTSKGRKPYLHESRHNHAMRRPRGPGGRFL 60

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	365
4g92_A	64	HAPB protein; transcription factor, nucleosome, mi	100.0

>4g92_A HAPB protein; transcription factor, nucleosome, minor groove binding, CCAA complex, histone fold motif, specific binding to the ccaat- nucleus; HET: DNA; 1.80A {Emericella nidulans} PDB: 4g91_A*

Probab=100.00  E-value=4.9e-36  Score=231.30  Aligned_cols=62  Identities=63%  Similarity=0.987  Sum_probs=58.4

Q ss_pred             CCceeecchhhHHHHHHHHHHHHHHHhhhhh-hcCCCccccchhhHhhhcCCCCCCccccccc
Q 017825          177 EEPVYVNAKQYHGILRRRQLRAKAELERKLI-KVRKPYLHESRHLHAMRRARGCGGRFVNTKK  238 (365)
Q Consensus       177 eePvyVNaKQY~rIlrRR~~Rak~e~~~kl~-k~rk~YlHESRH~HAm~R~Rg~gGRFl~~kk  238 (365)
                      |+|||||||||++|||||++|||+|++++|+ +.||||||||||+|||+|+||+||||||+++
T Consensus         2 eePiyVNaKQy~~IlrRR~~Rakle~~~kl~~~~rk~YlhESRH~HAm~R~Rg~gGRFl~~~e   64 (64)
T 4g92_A            2 ESPLYVNAKQFHRILKRRVARQKLEEQLRLTSKGRKPYLHESRHNHAMRRPRGPGGRFLTADE   64 (64)
T ss_dssp             -CCSCCCTTTHHHHHHHHHHHHHHHHHTTCCSSSCCSCSCHHHHHHHHHSCBCTTSCBCCCC-
T ss_pred             CCCeeECHHHHHHHHHHHHHHHHHHHhCCcccccccCcchhHHHHHHhcCCcCCCCccccCCC
Confidence            7999999999999999999999999999985 8899999999999999999999999998874

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00