Citrus Sinensis ID: 017856
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 365 | 2.2.26 [Sep-21-2011] | |||||||
| O81360 | 661 | Zeaxanthin epoxidase, chl | N/A | no | 0.980 | 0.541 | 0.75 | 1e-159 | |
| Q40412 | 663 | Zeaxanthin epoxidase, chl | N/A | no | 0.980 | 0.539 | 0.725 | 1e-157 | |
| P93236 | 669 | Zeaxanthin epoxidase, chl | N/A | no | 0.989 | 0.539 | 0.711 | 1e-151 | |
| Q9FGC7 | 667 | Zeaxanthin epoxidase, chl | yes | no | 0.994 | 0.544 | 0.693 | 1e-151 | |
| Q96375 | 660 | Zeaxanthin epoxidase, chl | N/A | no | 0.964 | 0.533 | 0.697 | 1e-146 | |
| Q0JCU7 | 659 | Zeaxanthin epoxidase, chl | yes | no | 0.983 | 0.544 | 0.692 | 1e-145 | |
| P86491 | 385 | 6-hydroxynicotinate 3-mon | yes | no | 0.276 | 0.262 | 0.385 | 6e-12 | |
| A6T923 | 384 | FAD-dependent urate hydro | yes | no | 0.301 | 0.286 | 0.383 | 1e-11 | |
| Q88FY2 | 382 | 6-hydroxynicotinate 3-mon | yes | no | 0.320 | 0.306 | 0.330 | 4e-11 | |
| B6D1N4 | 384 | FAD-dependent urate hydro | yes | no | 0.301 | 0.286 | 0.383 | 5e-11 |
| >sp|O81360|ABA2_PRUAR Zeaxanthin epoxidase, chloroplastic OS=Prunus armeniaca PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 560 bits (1444), Expect = e-159, Method: Compositional matrix adjust.
Identities = 273/364 (75%), Positives = 307/364 (84%), Gaps = 6/364 (1%)
Query: 1 MQWYAFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFT 60
MQWYAFHKE GGVD P GKKERLLKIFEGWCDNV+DL+LAT+E+AILRRDIYDRTPI T
Sbjct: 303 MQWYAFHKESPGGVDSPNGKKERLLKIFEGWCDNVIDLLLATEEDAILRRDIYDRTPILT 362
Query: 61 WGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKS 120
WG+G VTLLGDSVHAMQPN+GQGGCMAIEDGYQLA+EL+KA KKS+E+ TP+D+ S+L+S
Sbjct: 363 WGKGHVTLLGDSVHAMQPNMGQGGCMAIEDGYQLALELDKAWKKSSETGTPVDVASSLRS 422
Query: 121 YERARRLRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTKFRIPHPGRVGGRFFIDLA 180
YE +RRLRVA+IHG+AR AA+MASTYKAYLGVGLGPLSFLTKFRIPHPGRVGGR FID A
Sbjct: 423 YENSRRLRVAIIHGMARMAALMASTYKAYLGVGLGPLSFLTKFRIPHPGRVGGRVFIDKA 482
Query: 181 MPLMLSWVLGGNSSKLEGRSPCCKLSDKASDNLRTWFRDDDALERAMNGEWFLVPSGSEN 240
MPLMLSWVLGGNSSKLEGRSP C+LSDKASD LR WF DDDALERA++GEW+L+P G +N
Sbjct: 483 MPLMLSWVLGGNSSKLEGRSPSCRLSDKASDQLRNWFEDDDALERAIDGEWYLIPCGQDN 542
Query: 241 VVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQS 300
SQ I L+ +N P +IGS H D S SI IP QVS+MHARISYKDGAFYL DL+S
Sbjct: 543 DASQLICLNRDEKN-PCIIGSAPHGDVSGISIAIPKPQVSEMHARISYKDGAFYLTDLRS 601
Query: 301 EHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVIGTPPNNNSERKEAGE 360
EHGT++ D EG+RYRV NFPARFRPSD IE GS K A FRVKV+ + P S KE
Sbjct: 602 EHGTWIADIEGKRYRVPPNFPARFRPSDAIEIGSQKVA-FRVKVMKSSP--GSVEKEG-- 656
Query: 361 ILQA 364
ILQA
Sbjct: 657 ILQA 660
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Converts zeaxanthin into antheraxanthin and subsequently violaxanthin. Involved in the epoxidation of zeaxanthin. Prunus armeniaca (taxid: 36596) EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 3EC: .EC: 9EC: 0 |
| >sp|Q40412|ABA2_NICPL Zeaxanthin epoxidase, chloroplastic OS=Nicotiana plumbaginifolia GN=ABA2 PE=1 SV=1 | Back alignment and function description |
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| >sp|P93236|ABA2_SOLLC Zeaxanthin epoxidase, chloroplastic OS=Solanum lycopersicum PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9FGC7|ZEP_ARATH Zeaxanthin epoxidase, chloroplastic OS=Arabidopsis thaliana GN=ZEP PE=1 SV=1 | Back alignment and function description |
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| >sp|Q96375|ABA2_CAPAN Zeaxanthin epoxidase, chloroplastic OS=Capsicum annuum PE=2 SV=1 | Back alignment and function description |
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| >sp|Q0JCU7|ZEP_ORYSJ Zeaxanthin epoxidase, chloroplastic OS=Oryza sativa subsp. japonica GN=ZEP PE=2 SV=1 | Back alignment and function description |
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| >sp|P86491|6HN3M_PSEFL 6-hydroxynicotinate 3-monooxygenase OS=Pseudomonas fluorescens PE=1 SV=1 | Back alignment and function description |
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| >sp|A6T923|HPXO_KLEP7 FAD-dependent urate hydroxylase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=hpxO PE=1 SV=1 | Back alignment and function description |
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| >sp|Q88FY2|6HN3M_PSEPK 6-hydroxynicotinate 3-monooxygenase OS=Pseudomonas putida (strain KT2440) GN=nicC PE=1 SV=1 | Back alignment and function description |
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| >sp|B6D1N4|HPXO_KLEPN FAD-dependent urate hydroxylase OS=Klebsiella pneumoniae GN=hpxO PE=3 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 365 | ||||||
| 290361326 | 664 | zeaxanthin epoxidase [Citrus sinensis] | 1.0 | 0.549 | 0.994 | 0.0 | |
| 290361322 | 664 | zeaxanthin epoxidase [Citrus unshiu] | 1.0 | 0.549 | 0.994 | 0.0 | |
| 17402597 | 664 | zeaxanthin epoxidase [Citrus unshiu] | 1.0 | 0.549 | 0.991 | 0.0 | |
| 190576749 | 664 | zeaxanthin epoxidase [Citrus maxima] | 1.0 | 0.549 | 0.975 | 0.0 | |
| 290361328 | 664 | zeaxanthin epoxidase [Citrus sinensis] | 1.0 | 0.549 | 0.964 | 0.0 | |
| 290361324 | 664 | zeaxanthin epoxidase [Citrus unshiu] | 1.0 | 0.549 | 0.964 | 0.0 | |
| 225438718 | 658 | PREDICTED: zeaxanthin epoxidase, chlorop | 0.986 | 0.547 | 0.772 | 1e-163 | |
| 38112202 | 658 | zeaxanthin epoxidase [Vitis vinifera] | 0.986 | 0.547 | 0.772 | 1e-163 | |
| 399158079 | 658 | zeaxanthin epoxidase 1 [Vitis vinifera] | 0.986 | 0.547 | 0.769 | 1e-163 | |
| 224084342 | 692 | predicted protein [Populus trichocarpa] | 0.994 | 0.524 | 0.706 | 1e-162 |
| >gi|290361326|dbj|BAI79259.1| zeaxanthin epoxidase [Citrus sinensis] | Back alignment and taxonomy information |
|---|
Score = 756 bits (1952), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/365 (99%), Positives = 364/365 (99%)
Query: 1 MQWYAFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFT 60
MQWYAF+KEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFT
Sbjct: 300 MQWYAFNKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFT 359
Query: 61 WGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKS 120
WGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKS
Sbjct: 360 WGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKS 419
Query: 121 YERARRLRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTKFRIPHPGRVGGRFFIDLA 180
YERARRLRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTKFRIPHPGRVGGRFFIDLA
Sbjct: 420 YERARRLRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTKFRIPHPGRVGGRFFIDLA 479
Query: 181 MPLMLSWVLGGNSSKLEGRSPCCKLSDKASDNLRTWFRDDDALERAMNGEWFLVPSGSEN 240
MPLMLSWVLGGNSSKLEGRSPCCKLSDKASDNLRTWFRDDDALERAMNGEWFLVPSGSEN
Sbjct: 480 MPLMLSWVLGGNSSKLEGRSPCCKLSDKASDNLRTWFRDDDALERAMNGEWFLVPSGSEN 539
Query: 241 VVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQS 300
VVSQPIYLSVSHENEPYLIGSESHEDF RTSIVIPSAQVSKMHARISYKDGAFYLIDLQS
Sbjct: 540 VVSQPIYLSVSHENEPYLIGSESHEDFPRTSIVIPSAQVSKMHARISYKDGAFYLIDLQS 599
Query: 301 EHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVIGTPPNNNSERKEAGE 360
EHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVIGTPPNNNSERKEAGE
Sbjct: 600 EHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVIGTPPNNNSERKEAGE 659
Query: 361 ILQAV 365
ILQAV
Sbjct: 660 ILQAV 664
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Source: Citrus sinensis Species: Citrus sinensis Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|290361322|dbj|BAI79257.1| zeaxanthin epoxidase [Citrus unshiu] | Back alignment and taxonomy information |
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| >gi|17402597|dbj|BAB78733.1| zeaxanthin epoxidase [Citrus unshiu] | Back alignment and taxonomy information |
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| >gi|190576749|gb|ACE79170.1| zeaxanthin epoxidase [Citrus maxima] | Back alignment and taxonomy information |
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| >gi|290361328|dbj|BAI79260.1| zeaxanthin epoxidase [Citrus sinensis] | Back alignment and taxonomy information |
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| >gi|290361324|dbj|BAI79258.1| zeaxanthin epoxidase [Citrus unshiu] | Back alignment and taxonomy information |
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| >gi|225438718|ref|XP_002282543.1| PREDICTED: zeaxanthin epoxidase, chloroplastic [Vitis vinifera] gi|296082420|emb|CBI21425.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|38112202|gb|AAR11195.1| zeaxanthin epoxidase [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|399158079|gb|AFP28801.1| zeaxanthin epoxidase 1 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|224084342|ref|XP_002307265.1| predicted protein [Populus trichocarpa] gi|222856714|gb|EEE94261.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 365 | ||||||
| TAIR|locus:2158083 | 667 | ABA1 "ABA DEFICIENT 1" [Arabid | 0.991 | 0.542 | 0.695 | 7.8e-142 | |
| UNIPROTKB|Q0JCU7 | 659 | ZEP "Zeaxanthin epoxidase, chl | 0.983 | 0.544 | 0.692 | 1e-132 | |
| UNIPROTKB|A6T923 | 384 | hpxO "FAD-dependent urate hydr | 0.323 | 0.307 | 0.369 | 2.6e-10 | |
| UNIPROTKB|P86491 | 385 | P86491 "6-hydroxynicotinate 3- | 0.241 | 0.228 | 0.411 | 5.7e-10 | |
| UNIPROTKB|B5B0J6 | 384 | hpxO "FAD-dependent urate hydr | 0.323 | 0.307 | 0.361 | 9.6e-10 | |
| UNIPROTKB|B6D1N4 | 384 | hpxO "FAD-dependent urate hydr | 0.323 | 0.307 | 0.369 | 9.6e-10 | |
| UNIPROTKB|Q88FY2 | 382 | nicC "6-hydroxynicotinate 3-mo | 0.304 | 0.290 | 0.338 | 4.6e-09 | |
| ASPGD|ASPL0000066976 | 234 | AN10916 [Emericella nidulans ( | 0.320 | 0.5 | 0.346 | 7.4e-09 | |
| ASPGD|ASPL0000042515 | 341 | AN1881 [Emericella nidulans (t | 0.293 | 0.313 | 0.333 | 7.6e-09 | |
| ASPGD|ASPL0000009127 | 364 | AN11035 [Emericella nidulans ( | 0.306 | 0.307 | 0.390 | 1.5e-08 |
| TAIR|locus:2158083 ABA1 "ABA DEFICIENT 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1387 (493.3 bits), Expect = 7.8e-142, P = 7.8e-142
Identities = 253/364 (69%), Positives = 304/364 (83%)
Query: 1 MQWYAFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFT 60
MQWYAFH+EPAGG D P G K+RL +IF+GWCDNV+DL+ AT+EEAILRRDIYDR+P FT
Sbjct: 303 MQWYAFHEEPAGGADAPNGMKKRLFEIFDGWCDNVLDLLHATEEEAILRRDIYDRSPGFT 362
Query: 61 WGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKS 120
WG+GRVTLLGDS+HAMQPN+GQGGCMAIED +QLA+EL++A K+S E+ TP+D+VS+LK
Sbjct: 363 WGKGRVTLLGDSIHAMQPNMGQGGCMAIEDSFQLALELDEAWKQSVETTTPVDVVSSLKR 422
Query: 121 YERARRLRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTKFRIPHPGRVGGRFFIDLA 180
YE +RRLRVA+IH +AR AA+MASTYKAYLGVGLGPLSFLTKFR+PHPGRVGGRFF+D+A
Sbjct: 423 YEESRRLRVAIIHAMARMAAIMASTYKAYLGVGLGPLSFLTKFRVPHPGRVGGRFFVDIA 482
Query: 181 MPLMLSWVLGGNSSKLEGRSPCCKLSDKASDNLRTWFRDDDALERAMNGEWFLVPSGSEN 240
MP ML WVLGGNS KL+GR P C+L+DKA D LR WF DDDALER + GEW+L+P G +
Sbjct: 483 MPSMLDWVLGGNSEKLQGRPPSCRLTDKADDRLREWFEDDDALERTIKGEWYLIPHGDDC 542
Query: 241 VVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQS 300
VS+ + L+ E++P ++GSE +DF IVIPS+QVSKMHAR+ YKDGAF+L+DL+S
Sbjct: 543 CVSETLCLT-KDEDQPCIVGSEPDQDFPGMRIVIPSSQVSKMHARVIYKDGAFFLMDLRS 601
Query: 301 EHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVIG-TPPNNNSERKEAG 359
EHGTYVTDNEGRRYR + NFPARFR SD IEFGSDKKA FRVKVI TP +
Sbjct: 602 EHGTYVTDNEGRRYRATPNFPARFRSSDIIEFGSDKKAAFRVKVIRKTPKSTRKNESNND 661
Query: 360 EILQ 363
++LQ
Sbjct: 662 KLLQ 665
|
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| UNIPROTKB|Q0JCU7 ZEP "Zeaxanthin epoxidase, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|A6T923 hpxO "FAD-dependent urate hydroxylase" [Klebsiella pneumoniae subsp. pneumoniae MGH 78578 (taxid:272620)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P86491 P86491 "6-hydroxynicotinate 3-monooxygenase" [Pseudomonas fluorescens (taxid:294)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|B5B0J6 hpxO "FAD-dependent urate hydroxylase" [Klebsiella oxytoca (taxid:571)] | Back alignment and assigned GO terms |
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| UNIPROTKB|B6D1N4 hpxO "FAD-dependent urate hydroxylase" [Klebsiella pneumoniae (taxid:573)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q88FY2 nicC "6-hydroxynicotinate 3-monooxygenase" [Pseudomonas putida KT2440 (taxid:160488)] | Back alignment and assigned GO terms |
|---|
| ASPGD|ASPL0000066976 AN10916 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
| ASPGD|ASPL0000042515 AN1881 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
| ASPGD|ASPL0000009127 AN11035 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.14.13 | 0.921 |
| 3rd Layer | 1.14.13.90 | 0.914 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 365 | |||
| PLN02927 | 668 | PLN02927, PLN02927, antheraxanthin epoxidase/zeaxa | 0.0 | |
| PRK08163 | 396 | PRK08163, PRK08163, salicylate hydroxylase; Provis | 1e-18 | |
| cd00060 | 102 | cd00060, FHA, Forkhead associated domain (FHA); fo | 2e-18 | |
| PRK06753 | 373 | PRK06753, PRK06753, hypothetical protein; Provisio | 7e-17 | |
| pfam00498 | 67 | pfam00498, FHA, FHA domain | 9e-15 | |
| PRK06847 | 375 | PRK06847, PRK06847, hypothetical protein; Provisio | 3e-13 | |
| PRK07538 | 413 | PRK07538, PRK07538, hypothetical protein; Provisio | 9e-13 | |
| COG0654 | 387 | COG0654, UbiH, 2-polyprenyl-6-methoxyphenol hydrox | 2e-12 | |
| smart00240 | 52 | smart00240, FHA, Forkhead associated domain | 4e-09 | |
| COG1716 | 191 | COG1716, COG1716, FOG: FHA domain [Signal transduc | 6e-09 | |
| PRK06475 | 400 | PRK06475, PRK06475, salicylate hydroxylase; Provis | 3e-08 | |
| TIGR03219 | 414 | TIGR03219, salicylate_mono, salicylate 1-monooxyge | 2e-07 | |
| PRK08255 | 765 | PRK08255, PRK08255, salicylyl-CoA 5-hydroxylase; R | 3e-05 | |
| PRK07045 | 388 | PRK07045, PRK07045, putative monooxygenase; Review | 3e-04 | |
| TIGR01988 | 387 | TIGR01988, Ubi-OHases, Ubiquinone biosynthesis hyd | 3e-04 | |
| TIGR03354 | 396 | TIGR03354, VI_FHA, type VI secretion system FHA do | 4e-04 | |
| PRK06183 | 500 | PRK06183, mhpA, 3-(3-hydroxyphenyl)propionate hydr | 4e-04 | |
| COG3456 | 430 | COG3456, COG3456, Predicted component of the type | 6e-04 | |
| PRK07588 | 391 | PRK07588, PRK07588, hypothetical protein; Provisio | 8e-04 | |
| pfam01494 | 349 | pfam01494, FAD_binding_3, FAD binding domain | 0.002 | |
| PRK05868 | 372 | PRK05868, PRK05868, hypothetical protein; Validate | 0.003 | |
| TIGR01989 | 437 | TIGR01989, COQ6, ubiquinone biosynthesis monooxyge | 0.004 |
| >gnl|CDD|178515 PLN02927, PLN02927, antheraxanthin epoxidase/zeaxanthin epoxidase | Back alignment and domain information |
|---|
Score = 552 bits (1424), Expect = 0.0
Identities = 254/364 (69%), Positives = 305/364 (83%), Gaps = 2/364 (0%)
Query: 1 MQWYAFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFT 60
MQWYAFH+EPAGG D P G K+RL +IF+GWCDNV+DL+ AT+E+AILRRDIYDR+P FT
Sbjct: 304 MQWYAFHEEPAGGADAPNGMKKRLFEIFDGWCDNVLDLLHATEEDAILRRDIYDRSPGFT 363
Query: 61 WGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKS 120
WG+GRVTLLGDS+HAMQPN+GQGGCMAIED +QLA+EL++A K+S E+ TP+D+VS+LK
Sbjct: 364 WGKGRVTLLGDSIHAMQPNMGQGGCMAIEDSFQLALELDEAWKQSVETNTPVDVVSSLKR 423
Query: 121 YERARRLRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTKFRIPHPGRVGGRFFIDLA 180
YE +RRLRVA+IH +AR AA+MASTYKAYLGVGLGPLSFLTKFR+PHPGRVGGRFF+D+A
Sbjct: 424 YEESRRLRVAIIHAMARMAAIMASTYKAYLGVGLGPLSFLTKFRVPHPGRVGGRFFVDIA 483
Query: 181 MPLMLSWVLGGNSSKLEGRSPCCKLSDKASDNLRTWFRDDDALERAMNGEWFLVPSGSEN 240
MPLML WVLGGNS KLEGR P C+L+DKA D LR WF DDDALER + GEW+L+P G +
Sbjct: 484 MPLMLDWVLGGNSEKLEGRPPSCRLTDKADDRLREWFEDDDALERTIKGEWYLIPHGDDC 543
Query: 241 VVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQS 300
VS+ + L+ E++P ++GSE +DF IVIPS+QVSKMHAR+ YKDGAF+L+DL+S
Sbjct: 544 CVSETLCLT-KDEDQPCIVGSEPDQDFPGMRIVIPSSQVSKMHARVIYKDGAFFLMDLRS 602
Query: 301 EHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVI-GTPPNNNSERKEAG 359
EHGTYVTDNEGRRYR + NFPARFR SD IEFGSDKKA FRVKVI TP +
Sbjct: 603 EHGTYVTDNEGRRYRATPNFPARFRSSDIIEFGSDKKAAFRVKVIRKTPKSTRKNESNND 662
Query: 360 EILQ 363
++LQ
Sbjct: 663 KLLQ 666
|
Length = 668 |
| >gnl|CDD|181262 PRK08163, PRK08163, salicylate hydroxylase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|238017 cd00060, FHA, Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
| >gnl|CDD|168661 PRK06753, PRK06753, hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|215951 pfam00498, FHA, FHA domain | Back alignment and domain information |
|---|
| >gnl|CDD|235874 PRK06847, PRK06847, hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|236046 PRK07538, PRK07538, hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223727 COG0654, UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] | Back alignment and domain information |
|---|
| >gnl|CDD|214578 smart00240, FHA, Forkhead associated domain | Back alignment and domain information |
|---|
| >gnl|CDD|224630 COG1716, COG1716, FOG: FHA domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >gnl|CDD|180582 PRK06475, PRK06475, salicylate hydroxylase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|132263 TIGR03219, salicylate_mono, salicylate 1-monooxygenase | Back alignment and domain information |
|---|
| >gnl|CDD|236203 PRK08255, PRK08255, salicylyl-CoA 5-hydroxylase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|136171 PRK07045, PRK07045, putative monooxygenase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|233671 TIGR01988, Ubi-OHases, Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family | Back alignment and domain information |
|---|
| >gnl|CDD|234178 TIGR03354, VI_FHA, type VI secretion system FHA domain protein | Back alignment and domain information |
|---|
| >gnl|CDD|235727 PRK06183, mhpA, 3-(3-hydroxyphenyl)propionate hydroxylase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|225987 COG3456, COG3456, Predicted component of the type VI protein secretion system, contains a FHA domain [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >gnl|CDD|169028 PRK07588, PRK07588, hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|216530 pfam01494, FAD_binding_3, FAD binding domain | Back alignment and domain information |
|---|
| >gnl|CDD|180297 PRK05868, PRK05868, hypothetical protein; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|233672 TIGR01989, COQ6, ubiquinone biosynthesis monooxygenase COQ6 | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 365 | |||
| PLN02927 | 668 | antheraxanthin epoxidase/zeaxanthin epoxidase | 100.0 | |
| TIGR03219 | 414 | salicylate_mono salicylate 1-monooxygenase. Member | 99.87 | |
| PRK06753 | 373 | hypothetical protein; Provisional | 99.84 | |
| PRK08163 | 396 | salicylate hydroxylase; Provisional | 99.83 | |
| PRK06475 | 400 | salicylate hydroxylase; Provisional | 99.82 | |
| PRK07236 | 386 | hypothetical protein; Provisional | 99.82 | |
| PRK07538 | 413 | hypothetical protein; Provisional | 99.81 | |
| PRK07588 | 391 | hypothetical protein; Provisional | 99.8 | |
| PRK06847 | 375 | hypothetical protein; Provisional | 99.8 | |
| PF00498 | 68 | FHA: FHA domain; InterPro: IPR000253 The forkhead- | 99.77 | |
| PRK05868 | 372 | hypothetical protein; Validated | 99.77 | |
| PRK07045 | 388 | putative monooxygenase; Reviewed | 99.75 | |
| PRK05714 | 405 | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hy | 99.74 | |
| KOG2614 | 420 | consensus Kynurenine 3-monooxygenase and related f | 99.73 | |
| TIGR02360 | 390 | pbenz_hydroxyl 4-hydroxybenzoate 3-monooxygenase. | 99.72 | |
| PRK06617 | 374 | 2-octaprenyl-6-methoxyphenyl hydroxylase; Validate | 99.7 | |
| PRK06183 | 538 | mhpA 3-(3-hydroxyphenyl)propionate hydroxylase; Va | 99.7 | |
| PRK08132 | 547 | FAD-dependent oxidoreductase; Provisional | 99.69 | |
| PRK08849 | 384 | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hy | 99.69 | |
| PRK06996 | 398 | hypothetical protein; Provisional | 99.68 | |
| PRK08255 | 765 | salicylyl-CoA 5-hydroxylase; Reviewed | 99.68 | |
| PRK08243 | 392 | 4-hydroxybenzoate 3-monooxygenase; Validated | 99.66 | |
| PRK08773 | 392 | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hy | 99.65 | |
| PRK06184 | 502 | hypothetical protein; Provisional | 99.65 | |
| PRK08013 | 400 | oxidoreductase; Provisional | 99.64 | |
| PRK07494 | 388 | 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisio | 99.63 | |
| PRK06185 | 407 | hypothetical protein; Provisional | 99.63 | |
| PRK06834 | 488 | hypothetical protein; Provisional | 99.63 | |
| PRK08850 | 405 | 2-octaprenyl-6-methoxyphenol hydroxylase; Validate | 99.63 | |
| PF01494 | 356 | FAD_binding_3: FAD binding domain; InterPro: IPR00 | 99.63 | |
| PRK07364 | 415 | 2-octaprenyl-6-methoxyphenyl hydroxylase; Validate | 99.62 | |
| PRK08244 | 493 | hypothetical protein; Provisional | 99.62 | |
| PRK06126 | 545 | hypothetical protein; Provisional | 99.61 | |
| COG0654 | 387 | UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and | 99.61 | |
| PRK07333 | 403 | 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisio | 99.61 | |
| PRK08294 | 634 | phenol 2-monooxygenase; Provisional | 99.61 | |
| PLN02985 | 514 | squalene monooxygenase | 99.6 | |
| PRK08020 | 391 | ubiF 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquin | 99.6 | |
| TIGR01989 | 437 | COQ6 Ubiquinone biosynthesis mono0xygenase COQ6. T | 99.6 | |
| PTZ00367 | 567 | squalene epoxidase; Provisional | 99.57 | |
| TIGR01984 | 382 | UbiH 2-polyprenyl-6-methoxyphenol 4-hydroxylase. T | 99.57 | |
| PRK07608 | 388 | ubiquinone biosynthesis hydroxylase family protein | 99.56 | |
| PRK09126 | 392 | hypothetical protein; Provisional | 99.56 | |
| TIGR01988 | 385 | Ubi-OHases Ubiquinone biosynthesis hydroxylase, Ub | 99.56 | |
| cd00060 | 102 | FHA Forkhead associated domain (FHA); found in euk | 99.55 | |
| PRK05732 | 395 | 2-octaprenyl-6-methoxyphenyl hydroxylase; Validate | 99.55 | |
| PRK07190 | 487 | hypothetical protein; Provisional | 99.54 | |
| TIGR03354 | 396 | VI_FHA type VI secretion system FHA domain protein | 99.52 | |
| COG1716 | 191 | FOG: FHA domain [Signal transduction mechanisms] | 99.38 | |
| KOG1882 | 293 | consensus Transcriptional regulator SNIP1, contain | 99.33 | |
| smart00240 | 52 | FHA Forkhead associated domain. Found in eukaryoti | 99.27 | |
| COG3456 | 430 | Predicted component of the type VI protein secreti | 99.22 | |
| KOG1881 | 793 | consensus Anion exchanger adaptor protein Kanadapt | 98.95 | |
| PF08491 | 276 | SE: Squalene epoxidase; InterPro: IPR013698 This d | 98.89 | |
| TIGR02032 | 295 | GG-red-SF geranylgeranyl reductase family. This mo | 98.82 | |
| KOG1880 | 337 | consensus Nuclear inhibitor of phosphatase-1 [Gene | 98.74 | |
| KOG3855 | 481 | consensus Monooxygenase involved in coenzyme Q (ub | 98.7 | |
| TIGR02023 | 388 | BchP-ChlP geranylgeranyl reductase. This model rep | 98.68 | |
| PLN00093 | 450 | geranylgeranyl diphosphate reductase; Provisional | 98.53 | |
| PRK11445 | 351 | putative oxidoreductase; Provisional | 98.53 | |
| TIGR01790 | 388 | carotene-cycl lycopene cyclase family protein. Thi | 98.5 | |
| TIGR02028 | 398 | ChlP geranylgeranyl reductase. This model represen | 98.48 | |
| TIGR01789 | 370 | lycopene_cycl lycopene cyclase. This model represe | 98.21 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 97.86 | |
| TIGR02500 | 410 | type_III_yscD type III secretion apparatus protein | 97.66 | |
| PRK10015 | 429 | oxidoreductase; Provisional | 97.41 | |
| KOG0245 | 1221 | consensus Kinesin-like protein [Cytoskeleton] | 97.26 | |
| PRK10157 | 428 | putative oxidoreductase FixC; Provisional | 97.19 | |
| KOG1892 | 1629 | consensus Actin filament-binding protein Afadin [C | 97.02 | |
| KOG2293 | 547 | consensus Daxx-interacting protein MSP58/p78, cont | 96.95 | |
| COG0644 | 396 | FixC Dehydrogenases (flavoproteins) [Energy produc | 96.82 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 96.38 | |
| KOG1298 | 509 | consensus Squalene monooxygenase [Lipid transport | 96.23 | |
| PF04820 | 454 | Trp_halogenase: Tryptophan halogenase; InterPro: I | 95.75 | |
| PLN02697 | 529 | lycopene epsilon cyclase | 95.67 | |
| KOG0241 | 1714 | consensus Kinesin-like protein [Cytoskeleton] | 94.36 | |
| PLN02463 | 447 | lycopene beta cyclase | 90.38 |
| >PLN02927 antheraxanthin epoxidase/zeaxanthin epoxidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-67 Score=543.83 Aligned_cols=364 Identities=70% Similarity=1.234 Sum_probs=329.0
Q ss_pred CEEEEEeeCCCCCCCCCcchHHHHHHHhcCCCHHHHHHHHcCCccceEEeeeeccCCCCCccCCCEEEecccccccCCCC
Q 017856 1 MQWYAFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNL 80 (365)
Q Consensus 1 ~~W~~~~~~~~~~~~~~~~~~e~l~~~~~~w~p~~~~li~~~~~~~~~~~~~~~~~~~~~w~~grv~LiGDAAH~~~P~~ 80 (365)
++||+++..|....+.++..++++++.|++|++.+.++|+.++++.+..+++|+..+..+|++|||+|+|||||+|+|+.
T Consensus 304 ~~~~~f~~~p~~~~~~~~~~~e~L~~~f~~w~~~v~elI~~t~~~~i~~~~iyd~~p~~~W~~grVvLiGDAAH~~~P~~ 383 (668)
T PLN02927 304 MQWYAFHEEPAGGADAPNGMKKRLFEIFDGWCDNVLDLLHATEEDAILRRDIYDRSPGFTWGKGRVTLLGDSIHAMQPNM 383 (668)
T ss_pred EEEEEEEECCccccccchhHHHHHHHHhccCCHHHHHHHHhCccccceeeeEEeccCCCccccCcEEEEcCccCCCCCcc
Confidence 46888877765434456678999999999999999999998876678899999998888999999999999999999999
Q ss_pred chhhhhHHHHHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcCCCChhHHh
Q 017856 81 GQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFL 160 (365)
Q Consensus 81 GqG~n~aieDa~~La~~L~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 160 (365)
|||+|+|||||++|+++|.+..+.....+...++..+|+.||++|++|+..++..+++...+...++.|++.+.+|..|+
T Consensus 384 GqG~n~AieDa~~La~~L~~~~~~~~~~~~~~~~~~aL~~Ye~~R~~rv~~i~~~ar~a~~~~~~~~~y~~~~~~p~~~~ 463 (668)
T PLN02927 384 GQGGCMAIEDSFQLALELDEAWKQSVETNTPVDVVSSLKRYEESRRLRVAIIHAMARMAAIMASTYKAYLGVGLGPLSFL 463 (668)
T ss_pred ccchHHHHHHHHHHHHHHHHhhccccccCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHH
Confidence 99999999999999999988754322222334688999999999999999999999999999999999999889999999
Q ss_pred hhccCCCCcccccchhhhhhhhHHHHHHhhccCCccCCCCCCcCCCcccccchhhccCCchHHhhccCCcEEEEEcCCCC
Q 017856 161 TKFRIPHPGRVGGRFFIDLAMPLMLSWVLGGNSSKLEGRSPCCKLSDKASDNLRTWFRDDDALERAMNGEWFLVPSGSEN 240 (365)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~d~~~~~l~~~l~~~~ale~~~~~~w~l~~~~~~~ 240 (365)
+.+.||+|++..++++.+..||.|++|+++++++.++|+.+.|.++||+++.+..|+++|+|+|++..++|||+|.++.+
T Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~l~~~~~~~ 543 (668)
T PLN02927 464 TKFRVPHPGRVGGRFFVDIAMPLMLDWVLGGNSEKLEGRPPSCRLTDKADDRLREWFEDDDALERTIKGEWYLIPHGDDC 543 (668)
T ss_pred HhcCCCCCCceeeeeeeecccHHHhhhhhcCCccccCCCCCccccccchhHHHHHHhcccHHHHHhhcCCeEEEecCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred CccccEEEeecCCCCCEEEcCCCCCCCCcceEEeCCccccccceEEEEECCEEEEEEcCCCccceeeCCCCceeeecCCC
Q 017856 241 VVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNF 320 (365)
Q Consensus 241 ~~~~~i~l~~~~~~~~~~IGR~~~~~~~~~di~l~~~~VSr~Ha~i~~~~~~~~i~Dl~S~nGT~vng~~~~~~~l~~~~ 320 (365)
...++|+|. ++++.+++|||.++.+.++..|+|+++.||+.||+|.++++.|+|+||+|+||||||+++|+++++.|+.
T Consensus 544 ~~~~~~~l~-~~~~~p~~iG~~~~~~~~~~~i~i~~~~vS~~Ha~i~~~~~~~~~~Dl~S~nGT~v~~~~~~r~~~~p~~ 622 (668)
T PLN02927 544 CVSETLCLT-KDEDQPCIVGSEPDQDFPGMRIVIPSSQVSKMHARVIYKDGAFFLMDLRSEHGTYVTDNEGRRYRATPNF 622 (668)
T ss_pred cccceeeee-cCCCCCeEecCCCCcCCCCceEEecCCccChhHeEEEEECCEEEEEECCCCCccEEeCCCCceEecCCCC
Confidence 777899998 8889999999999944444446999999999999999999999999999999999999999999999999
Q ss_pred cEEeCCCCEEEECCCceeEEEEEEecCCCCCCcccccc-ccccccC
Q 017856 321 PARFRPSDTIEFGSDKKAIFRVKVIGTPPNNNSERKEA-GEILQAV 365 (365)
Q Consensus 321 ~~~L~~Gd~I~~G~~~~~~f~~~~~~~~p~~~~~~~~~-~~~~~~~ 365 (365)
++.|++||+|+||+.++..|+++...++|..+.++++. .++||++
T Consensus 623 ~~~l~~~d~I~~g~~~~~~fr~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (668)
T PLN02927 623 PARFRSSDIIEFGSDKKAAFRVKVIRKTPKSTRKNESNNDKLLQTA 668 (668)
T ss_pred ceEeCCCCEEEeCCCcceeEEEEeecCCCcchhhcccchhhhhhcC
Confidence 99999999999999877889999999999887344433 5899886
|
|
| >TIGR03219 salicylate_mono salicylate 1-monooxygenase | Back alignment and domain information |
|---|
| >PRK06753 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK08163 salicylate hydroxylase; Provisional | Back alignment and domain information |
|---|
| >PRK06475 salicylate hydroxylase; Provisional | Back alignment and domain information |
|---|
| >PRK07236 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK07538 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK07588 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK06847 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PF00498 FHA: FHA domain; InterPro: IPR000253 The forkhead-associated (FHA) domain [] is a phosphopeptide recognition domain found in many regulatory proteins | Back alignment and domain information |
|---|
| >PRK05868 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK07045 putative monooxygenase; Reviewed | Back alignment and domain information |
|---|
| >PRK05714 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional | Back alignment and domain information |
|---|
| >KOG2614 consensus Kynurenine 3-monooxygenase and related flavoprotein monooxygenases [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
| >TIGR02360 pbenz_hydroxyl 4-hydroxybenzoate 3-monooxygenase | Back alignment and domain information |
|---|
| >PRK06617 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated | Back alignment and domain information |
|---|
| >PRK06183 mhpA 3-(3-hydroxyphenyl)propionate hydroxylase; Validated | Back alignment and domain information |
|---|
| >PRK08132 FAD-dependent oxidoreductase; Provisional | Back alignment and domain information |
|---|
| >PRK08849 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional | Back alignment and domain information |
|---|
| >PRK06996 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK08255 salicylyl-CoA 5-hydroxylase; Reviewed | Back alignment and domain information |
|---|
| >PRK08243 4-hydroxybenzoate 3-monooxygenase; Validated | Back alignment and domain information |
|---|
| >PRK08773 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Validated | Back alignment and domain information |
|---|
| >PRK06184 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK08013 oxidoreductase; Provisional | Back alignment and domain information |
|---|
| >PRK07494 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisional | Back alignment and domain information |
|---|
| >PRK06185 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK06834 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK08850 2-octaprenyl-6-methoxyphenol hydroxylase; Validated | Back alignment and domain information |
|---|
| >PF01494 FAD_binding_3: FAD binding domain; InterPro: IPR002938 Monooxygenases incorporate one hydroxyl group into substrates and are found in many metabolic pathways | Back alignment and domain information |
|---|
| >PRK07364 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated | Back alignment and domain information |
|---|
| >PRK08244 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK06126 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >COG0654 UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] | Back alignment and domain information |
|---|
| >PRK07333 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisional | Back alignment and domain information |
|---|
| >PRK08294 phenol 2-monooxygenase; Provisional | Back alignment and domain information |
|---|
| >PLN02985 squalene monooxygenase | Back alignment and domain information |
|---|
| >PRK08020 ubiF 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed | Back alignment and domain information |
|---|
| >TIGR01989 COQ6 Ubiquinone biosynthesis mono0xygenase COQ6 | Back alignment and domain information |
|---|
| >PTZ00367 squalene epoxidase; Provisional | Back alignment and domain information |
|---|
| >TIGR01984 UbiH 2-polyprenyl-6-methoxyphenol 4-hydroxylase | Back alignment and domain information |
|---|
| >PRK07608 ubiquinone biosynthesis hydroxylase family protein; Provisional | Back alignment and domain information |
|---|
| >PRK09126 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >TIGR01988 Ubi-OHases Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family | Back alignment and domain information |
|---|
| >cd00060 FHA Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
| >PRK05732 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated | Back alignment and domain information |
|---|
| >PRK07190 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >TIGR03354 VI_FHA type VI secretion system FHA domain protein | Back alignment and domain information |
|---|
| >COG1716 FOG: FHA domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG1882 consensus Transcriptional regulator SNIP1, contains FHA domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >smart00240 FHA Forkhead associated domain | Back alignment and domain information |
|---|
| >COG3456 Predicted component of the type VI protein secretion system, contains a FHA domain [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG1881 consensus Anion exchanger adaptor protein Kanadaptin, contains FHA domain [General function prediction only] | Back alignment and domain information |
|---|
| >PF08491 SE: Squalene epoxidase; InterPro: IPR013698 This domain is found in squalene epoxidase (SE) and related proteins which are found in taxonomically diverse groups of eukaryotes and also in bacteria | Back alignment and domain information |
|---|
| >TIGR02032 GG-red-SF geranylgeranyl reductase family | Back alignment and domain information |
|---|
| >KOG1880 consensus Nuclear inhibitor of phosphatase-1 [General function prediction only] | Back alignment and domain information |
|---|
| >KOG3855 consensus Monooxygenase involved in coenzyme Q (ubiquinone) biosynthesis [Coenzyme transport and metabolism; Energy production and conversion] | Back alignment and domain information |
|---|
| >TIGR02023 BchP-ChlP geranylgeranyl reductase | Back alignment and domain information |
|---|
| >PLN00093 geranylgeranyl diphosphate reductase; Provisional | Back alignment and domain information |
|---|
| >PRK11445 putative oxidoreductase; Provisional | Back alignment and domain information |
|---|
| >TIGR01790 carotene-cycl lycopene cyclase family protein | Back alignment and domain information |
|---|
| >TIGR02028 ChlP geranylgeranyl reductase | Back alignment and domain information |
|---|
| >TIGR01789 lycopene_cycl lycopene cyclase | Back alignment and domain information |
|---|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >TIGR02500 type_III_yscD type III secretion apparatus protein, YscD/HrpQ family | Back alignment and domain information |
|---|
| >PRK10015 oxidoreductase; Provisional | Back alignment and domain information |
|---|
| >KOG0245 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >PRK10157 putative oxidoreductase FixC; Provisional | Back alignment and domain information |
|---|
| >KOG1892 consensus Actin filament-binding protein Afadin [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG2293 consensus Daxx-interacting protein MSP58/p78, contains FHA domain [Transcription; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG0644 FixC Dehydrogenases (flavoproteins) [Energy production and conversion] | Back alignment and domain information |
|---|
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
| >KOG1298 consensus Squalene monooxygenase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >PF04820 Trp_halogenase: Tryptophan halogenase; InterPro: IPR006905 Tryptophan halogenase catalyses the chlorination of tryptophan to form 7-chlorotryptophan | Back alignment and domain information |
|---|
| >PLN02697 lycopene epsilon cyclase | Back alignment and domain information |
|---|
| >KOG0241 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >PLN02463 lycopene beta cyclase | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 365 | ||||
| 3rp8_A | 407 | Crystal Structure Of Klebsiella Pneumoniae R204q Hp | 9e-13 | ||
| 3c96_A | 410 | Crystal Structure Of The Flavin-Containing Monooxyg | 1e-12 | ||
| 3rp6_A | 407 | Crystal Structure Of Klebsiella Pneumoniae Hpxo Com | 2e-12 | ||
| 2rgj_A | 402 | Crystal Structure Of Flavin-Containing Monooxygenas | 1e-11 | ||
| 3gmc_A | 415 | Crystal Structure Of 2-Methyl-3-Hydroxypyridine-5-C | 2e-06 | ||
| 3alh_A | 379 | Higher Resolution And Native Structure Of 2-Methyl- | 2e-06 | ||
| 3alk_A | 379 | Crystal Structure Of 2-Methyl-3-Hydroxypyridine-5-C | 5e-06 | ||
| 3all_A | 379 | Crystal Structure Of 2-Methyl-3-Hydroxypyridine-5-C | 1e-05 | ||
| 3gmb_A | 415 | Crystal Structure Of 2-Methyl-3-Hydroxypyridine-5-C | 2e-05 | ||
| 4hb9_A | 412 | Crystal Structure Of A Putative Fad Containing Mono | 1e-04 |
| >pdb|3RP8|A Chain A, Crystal Structure Of Klebsiella Pneumoniae R204q Hpxo Complexed With Fad Length = 407 | Back alignment and structure |
|
| >pdb|3C96|A Chain A, Crystal Structure Of The Flavin-Containing Monooxygenase Phzs From Pseudomonas Aeruginosa. Northeast Structural Genomics Consortium Target Par240 Length = 410 | Back alignment and structure |
| >pdb|3RP6|A Chain A, Crystal Structure Of Klebsiella Pneumoniae Hpxo Complexed With Fad Length = 407 | Back alignment and structure |
| >pdb|2RGJ|A Chain A, Crystal Structure Of Flavin-Containing Monooxygenase Phzs Length = 402 | Back alignment and structure |
| >pdb|3GMC|A Chain A, Crystal Structure Of 2-Methyl-3-Hydroxypyridine-5-Carboxylic Acid Oxygenase With Substrate Bound Length = 415 | Back alignment and structure |
| >pdb|3ALH|A Chain A, Higher Resolution And Native Structure Of 2-Methyl-3-Hydroxypyridine- 5-Carboxylic Acid Oxygenase Length = 379 | Back alignment and structure |
| >pdb|3ALK|A Chain A, Crystal Structure Of 2-Methyl-3-Hydroxypyridine-5-Carboxylic Acid Oxygenase, Mutant Y270f Length = 379 | Back alignment and structure |
| >pdb|3ALL|A Chain A, Crystal Structure Of 2-Methyl-3-Hydroxypyridine-5-Carboxylic Acid Oxygenase, Mutant Y270a Length = 379 | Back alignment and structure |
| >pdb|3GMB|A Chain A, Crystal Structure Of 2-Methyl-3-Hydroxypyridine-5-Carboxylic Acid Oxygenase Length = 415 | Back alignment and structure |
| >pdb|4HB9|A Chain A, Crystal Structure Of A Putative Fad Containing Monooxygenase From Photorhabdus Luminescens Subsp. Laumondii Tto1 (Target Psi-012791) Length = 412 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A* Length = 407 | Back alignment and structure |
|---|
Score = 172 bits (438), Expect = 2e-50
Identities = 46/140 (32%), Positives = 64/140 (45%), Gaps = 10/140 (7%)
Query: 1 MQWYAFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFT 60
++ PAG + + + L + F GW V LI A D + R +I+D P
Sbjct: 238 FYFFFDVPLPAGLAEDRDTLRADLSRYFAGWAPPVQKLIAALDPQTTNRIEIHDIEPFSR 297
Query: 61 WGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKS 120
RGRV LLGD+ H+ P++GQGGC A+ED L + DI +AL+
Sbjct: 298 LVRGRVALLGDAGHSTTPDIGQGGCAAMEDAVVLGAVFRQT----------RDIAAALRE 347
Query: 121 YERARRLRVAVIHGLARSAA 140
YE R RV + AR
Sbjct: 348 YEAQRCDRVRDLVLKARKRC 367
|
| >3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A* Length = 379 | Back alignment and structure |
|---|
| >3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A* Length = 410 | Back alignment and structure |
|---|
| >2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A* Length = 398 | Back alignment and structure |
|---|
| >2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2 Length = 397 | Back alignment and structure |
|---|
| >3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472} Length = 381 | Back alignment and structure |
|---|
| >3va4_A Mediator of DNA damage checkpoint protein 1; cell cycle, FHA domain, DNA-damage, CHK2 and MDC1 dimerizati; HET: TPO; 1.54A {Mus musculus} PDB: 3va1_A* 3umz_A 3unm_A 3unn_A* 3uot_A* 3un0_B Length = 132 | Back alignment and structure |
|---|
| >2jpe_A Nuclear inhibitor of protein phosphatase 1; FHA domain, NIPP1, mRNA splicing, transcription; NMR {Mus musculus} Length = 140 | Back alignment and structure |
|---|
| >3els_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 1.80A {Saccharomyces cerevisiae} Length = 158 | Back alignment and structure |
|---|
| >1uht_A Expressed protein; FHA domain, beta-sandwich, antiparallel beta-sheets, phosphopeptide binding motif, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.26.1.2 Length = 118 | Back alignment and structure |
|---|
| >3elv_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 2.40A {Saccharomyces cerevisiae} PDB: 2jkd_A Length = 205 | Back alignment and structure |
|---|
| >2pie_A E3 ubiquitin-protein ligase RNF8; FHA domain, complex, ligase, signaling protein; HET: TPO; 1.35A {Homo sapiens} SCOP: b.26.1.2 Length = 138 | Back alignment and structure |
|---|
| >3gqs_A Adenylate cyclase-like protein; FHA domain, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.20A {Chlamydia trachomatis} Length = 106 | Back alignment and structure |
|---|
| >2xt9_B Putative signal transduction protein GARA; lyase-signaling protein complex, KDH, KGD; HET: TPP; 2.20A {Mycobacterium smegmatis} Length = 115 | Back alignment and structure |
|---|
| >1r21_A Antigen KI-67; beta sandwich, cell cycle; NMR {Homo sapiens} SCOP: b.26.1.2 PDB: 2aff_A* Length = 128 | Back alignment and structure |
|---|
| >2kb3_A Oxoglutarate dehydrogenase inhibitor; forkhead-associated domain, kinase substrate, GARA, FHA, cytoplasm, phosphoprotein; HET: TPO; NMR {Corynebacterium glutamicum} PDB: 2kb4_A Length = 143 | Back alignment and structure |
|---|
| >3po8_A RV0020C protein, putative uncharacterized protein TB39.8; FHA domain, synthetic peptide, peptide binding protein; 1.50A {Mycobacterium tuberculosis} PDB: 3poa_A* 2lc1_A Length = 100 | Back alignment and structure |
|---|
| >2csw_A Ubiquitin ligase protein RNF8; 11-stranded beta sandwich, ring finger protein 8, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.26.1.2 Length = 145 | Back alignment and structure |
|---|
| >1g6g_A Protein kinase RAD53; beta-sandwich, phosphopeptide complex, cell cycle; HET: TPO; 1.60A {Saccharomyces cerevisiae} SCOP: b.26.1.2 Length = 127 | Back alignment and structure |
|---|
| >1g3g_A Protien kinase SPK1; FHA domain, RAD53, phosphopeptide, phosphoprotein, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1j4o_A 1j4p_A* 1j4q_A* 1k3j_A 1k3n_A* 1k3q_A* 2a0t_A* 2jqi_A* Length = 164 | Back alignment and structure |
|---|
| >2kfu_A RV1827 PThr 22; FHA domain, phosphorylation, intramolecular interaction, glutamate metabolism, phosphoprotein, protein binding; HET: TPO; NMR {Mycobacterium tuberculosis} PDB: 2kkl_A Length = 162 | Back alignment and structure |
|---|
| >3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida} Length = 430 | Back alignment and structure |
|---|
| >3oun_A Putative uncharacterized protein TB39.8; peptidoglycan, Ser/Thr kinase, pseudokinase, FHA domain, REG phosphorylation; HET: TPO; 2.71A {Mycobacterium tuberculosis} Length = 157 | Back alignment and structure |
|---|
| >2jqj_A DNA damage response protein kinase DUN1; protein/phosphopeptide, cell cycle; HET: DNA; NMR {Saccharomyces cerevisiae} PDB: 2jql_A* Length = 151 | Back alignment and structure |
|---|
| >3hx1_A SLR1951 protein; P74513_SYNY3, adenylate cyclase-like protein, NESG, structural genomics, PSI-2, protein structure initiative; 2.50A {Synechocystis SP} Length = 131 | Back alignment and structure |
|---|
| >2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa} Length = 399 | Back alignment and structure |
|---|
| >1lgp_A Cell cycle checkpoint protein CHFR; FHA, tungstate, domain swapping; 2.00A {Homo sapiens} SCOP: b.26.1.2 PDB: 1lgq_A Length = 116 | Back alignment and structure |
|---|
| >1wln_A Afadin; beta sandwich, FHA domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.26.1.2 Length = 120 | Back alignment and structure |
|---|
| >1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ... Length = 394 | Back alignment and structure |
|---|
| >3fm8_A Kinesin-like protein KIF13B; kinesin, GAP, GTPase activation, structural genomics consort ATP-binding, cytoskeleton, microtubule, motor protein, NUCL binding; 2.30A {Homo sapiens} PDB: 3mdb_A* Length = 124 | Back alignment and structure |
|---|
| >1gxc_A CHK2, CDS1, serine/threonine-protein kinase CHK2; phosphoprotein-binding domain, checkpoint kinase, transferase; HET: TPO; 2.7A {Homo sapiens} SCOP: b.26.1.2 Length = 149 | Back alignment and structure |
|---|
| >2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A* Length = 639 | Back alignment and structure |
|---|
| >3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens} Length = 535 | Back alignment and structure |
|---|
| >3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae} Length = 591 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 365 | |||
| 4h87_A | 130 | Kanadaptin; FHA domain of PF00498, mRNA processing | 99.87 | |
| 4hb9_A | 412 | Similarities with probable monooxygenase; flavin, | 99.86 | |
| 3va4_A | 132 | Mediator of DNA damage checkpoint protein 1; cell | 99.84 | |
| 2pie_A | 138 | E3 ubiquitin-protein ligase RNF8; FHA domain, comp | 99.83 | |
| 3gqs_A | 106 | Adenylate cyclase-like protein; FHA domain, struct | 99.83 | |
| 1uht_A | 118 | Expressed protein; FHA domain, beta-sandwich, anti | 99.82 | |
| 3rp8_A | 407 | Flavoprotein monooxygenase; FAD-binding protein, o | 99.82 | |
| 3po8_A | 100 | RV0020C protein, putative uncharacterized protein | 99.81 | |
| 2xt9_B | 115 | Putative signal transduction protein GARA; lyase-s | 99.81 | |
| 2kb3_A | 143 | Oxoglutarate dehydrogenase inhibitor; forkhead-ass | 99.81 | |
| 2jqj_A | 151 | DNA damage response protein kinase DUN1; protein/p | 99.81 | |
| 2csw_A | 145 | Ubiquitin ligase protein RNF8; 11-stranded beta sa | 99.8 | |
| 3els_A | 158 | PRE-mRNA leakage protein 1; intrinsically unstruct | 99.8 | |
| 1gxc_A | 149 | CHK2, CDS1, serine/threonine-protein kinase CHK2; | 99.8 | |
| 2kfu_A | 162 | RV1827 PThr 22; FHA domain, phosphorylation, intra | 99.79 | |
| 2jpe_A | 140 | Nuclear inhibitor of protein phosphatase 1; FHA do | 99.79 | |
| 1r21_A | 128 | Antigen KI-67; beta sandwich, cell cycle; NMR {Hom | 99.79 | |
| 1mzk_A | 139 | Kinase associated protein phosphatase; beta sandwi | 99.79 | |
| 1lgp_A | 116 | Cell cycle checkpoint protein CHFR; FHA, tungstate | 99.79 | |
| 1dmz_A | 158 | Protein (protein kinase SPK1); beta-sandwich, anti | 99.78 | |
| 3oun_A | 157 | Putative uncharacterized protein TB39.8; peptidogl | 99.77 | |
| 2vou_A | 397 | 2,6-dihydroxypyridine hydroxylase; oxidoreductase, | 99.77 | |
| 3elv_A | 205 | PRE-mRNA leakage protein 1; intrinsically unstruct | 99.77 | |
| 3hx1_A | 131 | SLR1951 protein; P74513_SYNY3, adenylate cyclase-l | 99.77 | |
| 2xdo_A | 398 | TETX2 protein; tetracycline degradation, tigecycli | 99.76 | |
| 1qu5_A | 182 | Protein kinase SPK1; FHA, RAD53, transferase; NMR | 99.76 | |
| 1g3g_A | 164 | Protien kinase SPK1; FHA domain, RAD53, phosphopep | 99.75 | |
| 1wln_A | 120 | Afadin; beta sandwich, FHA domain, structural geno | 99.75 | |
| 3c96_A | 410 | Flavin-containing monooxygenase; FAD, oxidoreducta | 99.74 | |
| 1g6g_A | 127 | Protein kinase RAD53; beta-sandwich, phosphopeptid | 99.73 | |
| 3c4a_A | 381 | Probable tryptophan hydroxylase VIOD; alpha-beta p | 99.73 | |
| 2ff4_A | 388 | Probable regulatory protein EMBR; winged-helix, te | 99.71 | |
| 2x3n_A | 399 | Probable FAD-dependent monooxygenase; oxidoreducta | 99.69 | |
| 3fm8_A | 124 | Kinesin-like protein KIF13B; kinesin, GAP, GTPase | 99.64 | |
| 4ejq_A | 154 | Kinesin-like protein KIF1A; homodimer, FHA domain, | 99.63 | |
| 3alj_A | 379 | 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; | 99.62 | |
| 3huf_A | 325 | DNA repair and telomere maintenance protein NBS1; | 99.62 | |
| 2qa2_A | 499 | CABE, polyketide oxygenase CABE; FAD, angucycline, | 99.62 | |
| 2qa1_A | 500 | PGAE, polyketide oxygenase PGAE; FAD, angucycline, | 99.61 | |
| 1pn0_A | 665 | Phenol 2-monooxygenase; two dimers, TLS refinement | 99.59 | |
| 3fmw_A | 570 | Oxygenase; mithramycin, baeyer-villiger, flavin bi | 99.59 | |
| 2r0c_A | 549 | REBC; flavin adenine dinucleotide, monooxygenase, | 99.55 | |
| 3ihg_A | 535 | RDME; flavoenzyme, anthracycline, polyketide biosy | 99.54 | |
| 3ihm_A | 430 | Styrene monooxygenase A; rossman fold, anti-parall | 99.53 | |
| 1k0i_A | 394 | P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, h | 99.52 | |
| 2dkh_A | 639 | 3-hydroxybenzoate hydroxylase; flavoprotein, monoo | 99.51 | |
| 4a0e_A | 123 | YSCD, type III secretion protein; transport protei | 99.4 | |
| 3kt9_A | 102 | Aprataxin; FHA domain, beta sandwich, beta sheet, | 99.37 | |
| 3uv0_A | 102 | Mutator 2, isoform B; FHA, protein binding, dimeri | 99.36 | |
| 3atr_A | 453 | Conserved archaeal protein; saturating double bond | 99.3 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 99.29 | |
| 3e1t_A | 512 | Halogenase; flavoprotein; HET: FAD; 2.05A {Chondro | 99.25 | |
| 2gmh_A | 584 | Electron transfer flavoprotein-ubiquinone oxidored | 99.25 | |
| 3oz2_A | 397 | Digeranylgeranylglycerophospholipid reductase; str | 99.24 | |
| 2brf_A | 110 | Bifunctional polynucleotide phosphatase/kinase; hy | 99.23 | |
| 3cgv_A | 397 | Geranylgeranyl reductase related protein; NP_39399 | 99.19 | |
| 2pyx_A | 526 | Tryptophan halogenase; structural genomics, JOI fo | 99.14 | |
| 3i3l_A | 591 | Alkylhalidase CMLS; flavin-dependent halogenase, c | 99.14 | |
| 1yj5_C | 143 | 5' polynucleotide kinase-3' phosphatase FHA domai; | 99.1 | |
| 4egx_A | 184 | Kinesin-like protein KIF1A; FHA domain, transport | 99.09 | |
| 1ujx_A | 119 | Polynucleotide kinase 3'-phosphatase; DNA repair, | 99.05 | |
| 2aqj_A | 538 | Tryptophan halogenase, pRNA; flavin-dependent halo | 98.98 | |
| 3nix_A | 421 | Flavoprotein/dehydrogenase; structural genomics, P | 98.95 | |
| 2weu_A | 511 | Tryptophan 5-halogenase; regioselectivity, antifun | 98.94 | |
| 2e4g_A | 550 | Tryptophan halogenase; flavin-binding, rebeccamyci | 98.91 | |
| 1wv3_A | 238 | Similar to DNA segregation ATPase and related prot | 98.75 | |
| 2bry_A | 497 | NEDD9 interacting protein with calponin homology a | 98.31 | |
| 3kkj_A | 336 | Amine oxidase, flavin-containing; oxidoreductase, | 95.87 | |
| 1yvv_A | 336 | Amine oxidase, flavin-containing; oxidoreductase, | 92.86 |
| >4h87_A Kanadaptin; FHA domain of PF00498, mRNA processing, nucleus, structural joint center for structural genomics, JCSG, protein structu initiative; HET: SO4; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.87 E-value=4.2e-22 Score=165.98 Aligned_cols=101 Identities=23% Similarity=0.393 Sum_probs=82.2
Q ss_pred CCcEEEEEcCCCCCccccEEEeecCCCCCEEEcCCCCCCCCcceEEeCCccccccceEEEE-----------ECCEEEEE
Q 017856 228 NGEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISY-----------KDGAFYLI 296 (365)
Q Consensus 228 ~~~w~l~~~~~~~~~~~~i~l~~~~~~~~~~IGR~~~~~~~~~di~l~~~~VSr~Ha~i~~-----------~~~~~~i~ 296 (365)
...|.|....++. ....+.|. .+..++|||.+. |||++++++|||+||.|.+ .++.|+|+
T Consensus 18 ~~~~~L~v~k~g~-~~~~~~L~---~~~~~~IGR~~~-----~di~l~~~~VSr~HA~I~~r~~~~~~~~~~~~~~~~l~ 88 (130)
T 4h87_A 18 TAPYSLETLKGGT-ILGTRSLK---GTSYCLFGRLSG-----CDVCLEHPSVSRYHAVLQHRASGPDGECDSNGPGFYLY 88 (130)
T ss_dssp CSCCEEEEEETTE-EEEEEECT---TCSEEEEESSTT-----SSEECCCTTSCSSCEEEEEBCCCCCC------CCEEEE
T ss_pred CCCEEEEEEECCe-eeeeEEeC---CCceEEEcCCcC-----CCEEeCCCCcchhcEEEEEecccCccceeccCCcceEe
Confidence 4468787765443 33667776 234489999998 9999999999999999975 35679999
Q ss_pred EcCCCccceeeCCCCceeeecCCCcEEeCCCCEEEECCCceeEEEEE
Q 017856 297 DLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVK 343 (365)
Q Consensus 297 Dl~S~nGT~vng~~~~~~~l~~~~~~~L~~Gd~I~~G~~~~~~f~~~ 343 (365)
||+|+|||||||+ +|.++.++.|++||+|+||..++ .|.++
T Consensus 89 Dl~StNGT~vNg~-----ri~~~~~~~L~~GD~I~~G~str-~yvl~ 129 (130)
T 4h87_A 89 DLGSTHGTFLNKT-----RIPPRTYCRVHVGHVVRFGGSTR-LFILQ 129 (130)
T ss_dssp ECSCSSCEEETTE-----ECCTTCCEECCTTCEEEETTCSE-EEEEE
T ss_pred eCCCCCceEECCE-----ECCCCceeECCCCCEEEECCceE-EEEEc
Confidence 9999999999999 99999999999999999999854 56654
|
| >4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens} | Back alignment and structure |
|---|
| >3va4_A Mediator of DNA damage checkpoint protein 1; cell cycle, FHA domain, DNA-damage, CHK2 and MDC1 dimerizati; HET: TPO; 1.54A {Mus musculus} PDB: 3va1_A* 3umz_A 3unm_A 3unn_A* 3uot_A* 3un0_B | Back alignment and structure |
|---|
| >2pie_A E3 ubiquitin-protein ligase RNF8; FHA domain, complex, ligase, signaling protein; HET: TPO; 1.35A {Homo sapiens} SCOP: b.26.1.2 | Back alignment and structure |
|---|
| >3gqs_A Adenylate cyclase-like protein; FHA domain, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.20A {Chlamydia trachomatis} | Back alignment and structure |
|---|
| >1uht_A Expressed protein; FHA domain, beta-sandwich, antiparallel beta-sheets, phosphopeptide binding motif, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.26.1.2 | Back alignment and structure |
|---|
| >3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A* | Back alignment and structure |
|---|
| >3po8_A RV0020C protein, putative uncharacterized protein TB39.8; FHA domain, synthetic peptide, peptide binding protein; 1.50A {Mycobacterium tuberculosis} SCOP: b.26.1.0 PDB: 3poa_A* 2lc1_A | Back alignment and structure |
|---|
| >2xt9_B Putative signal transduction protein GARA; lyase-signaling protein complex, KDH, KGD; HET: TPP; 2.20A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
| >2kb3_A Oxoglutarate dehydrogenase inhibitor; forkhead-associated domain, kinase substrate, GARA, FHA, cytoplasm, phosphoprotein; HET: TPO; NMR {Corynebacterium glutamicum} PDB: 2kb4_A | Back alignment and structure |
|---|
| >2jqj_A DNA damage response protein kinase DUN1; protein/phosphopeptide, cell cycle; HET: DNA; NMR {Saccharomyces cerevisiae} PDB: 2jql_A* | Back alignment and structure |
|---|
| >2csw_A Ubiquitin ligase protein RNF8; 11-stranded beta sandwich, ring finger protein 8, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.26.1.2 | Back alignment and structure |
|---|
| >3els_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >1gxc_A CHK2, CDS1, serine/threonine-protein kinase CHK2; phosphoprotein-binding domain, checkpoint kinase, transferase; HET: TPO; 2.7A {Homo sapiens} SCOP: b.26.1.2 | Back alignment and structure |
|---|
| >2kfu_A RV1827 PThr 22; FHA domain, phosphorylation, intramolecular interaction, glutamate metabolism, phosphoprotein, protein binding; HET: TPO; NMR {Mycobacterium tuberculosis} PDB: 2kkl_A | Back alignment and structure |
|---|
| >2jpe_A Nuclear inhibitor of protein phosphatase 1; FHA domain, NIPP1, mRNA splicing, transcription; NMR {Mus musculus} | Back alignment and structure |
|---|
| >1r21_A Antigen KI-67; beta sandwich, cell cycle; NMR {Homo sapiens} SCOP: b.26.1.2 PDB: 2aff_A* | Back alignment and structure |
|---|
| >1lgp_A Cell cycle checkpoint protein CHFR; FHA, tungstate, domain swapping; 2.00A {Homo sapiens} SCOP: b.26.1.2 PDB: 1lgq_A | Back alignment and structure |
|---|
| >1dmz_A Protein (protein kinase SPK1); beta-sandwich, antiparallel beta-sheets, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1fhq_A 1fhr_A* 1j4k_A* 1j4l_A* 1k2m_A* 1k2n_A* | Back alignment and structure |
|---|
| >3oun_A Putative uncharacterized protein TB39.8; peptidoglycan, Ser/Thr kinase, pseudokinase, FHA domain, REG phosphorylation; HET: TPO; 2.71A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2 | Back alignment and structure |
|---|
| >3elv_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 2.40A {Saccharomyces cerevisiae} PDB: 2jkd_A | Back alignment and structure |
|---|
| >3hx1_A SLR1951 protein; P74513_SYNY3, adenylate cyclase-like protein, NESG, structural genomics, PSI-2, protein structure initiative; 2.50A {Synechocystis SP} | Back alignment and structure |
|---|
| >2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A* | Back alignment and structure |
|---|
| >1qu5_A Protein kinase SPK1; FHA, RAD53, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 | Back alignment and structure |
|---|
| >1g3g_A Protien kinase SPK1; FHA domain, RAD53, phosphopeptide, phosphoprotein, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1j4o_A 1j4p_A* 1j4q_A* 1k3j_A 1k3n_A* 1k3q_A* 2a0t_A* 2jqi_A* | Back alignment and structure |
|---|
| >1wln_A Afadin; beta sandwich, FHA domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.26.1.2 | Back alignment and structure |
|---|
| >3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A* | Back alignment and structure |
|---|
| >1g6g_A Protein kinase RAD53; beta-sandwich, phosphopeptide complex, cell cycle; HET: TPO; 1.60A {Saccharomyces cerevisiae} SCOP: b.26.1.2 | Back alignment and structure |
|---|
| >3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472} | Back alignment and structure |
|---|
| >2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A* | Back alignment and structure |
|---|
| >2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
| >3fm8_A Kinesin-like protein KIF13B; kinesin, GAP, GTPase activation, structural genomics consort ATP-binding, cytoskeleton, microtubule, motor protein, NUCL binding; 2.30A {Homo sapiens} PDB: 3mdb_A* | Back alignment and structure |
|---|
| >4ejq_A Kinesin-like protein KIF1A; homodimer, FHA domain, transport protein; 1.89A {Homo sapiens} PDB: 2eh0_A 2g1l_A | Back alignment and structure |
|---|
| >3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A* | Back alignment and structure |
|---|
| >3huf_A DNA repair and telomere maintenance protein NBS1; NBS1, FHA domain, BRCT domain, phosphoprotein binding, phosp binding, DNA repair; HET: DNA TPO; 2.15A {Schizosaccharomyces pombe} PDB: 3hue_A* 3i0m_A* 3i0n_A* | Back alignment and structure |
|---|
| >2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces} | Back alignment and structure |
|---|
| >2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces} | Back alignment and structure |
|---|
| >1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A* | Back alignment and structure |
|---|
| >3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus} | Back alignment and structure |
|---|
| >2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A* | Back alignment and structure |
|---|
| >3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens} | Back alignment and structure |
|---|
| >3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida} | Back alignment and structure |
|---|
| >1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ... | Back alignment and structure |
|---|
| >2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A* | Back alignment and structure |
|---|
| >4a0e_A YSCD, type III secretion protein; transport protein, SAD phasing, type III secretion system; 2.04A {Yersinia pestis} PDB: 4d9v_A | Back alignment and structure |
|---|
| >3kt9_A Aprataxin; FHA domain, beta sandwich, beta sheet, AMP hydrolase, alternative splicing, disease mutation, DNA damage, DNA repair, DNA-binding; 1.65A {Homo sapiens} SCOP: b.26.1.0 | Back alignment and structure |
|---|
| >3uv0_A Mutator 2, isoform B; FHA, protein binding, dimerization; 1.90A {Drosophila melanogaster} | Back alignment and structure |
|---|
| >3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A* | Back alignment and structure |
|---|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
| >3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus} | Back alignment and structure |
|---|
| >2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A* | Back alignment and structure |
|---|
| >3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum} | Back alignment and structure |
|---|
| >2brf_A Bifunctional polynucleotide phosphatase/kinase; hydrolase/transferase, FHA, forkhead-associated, PNKP, PNK, polynucleotide kinase 3' phosphatase; 1.40A {Homo sapiens} SCOP: b.26.1.2 PDB: 2w3o_A* 1yjm_A* | Back alignment and structure |
|---|
| >2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina} | Back alignment and structure |
|---|
| >3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae} | Back alignment and structure |
|---|
| >1yj5_C 5' polynucleotide kinase-3' phosphatase FHA domai; beta sandwich, P-loop, transferase; 2.80A {Mus musculus} SCOP: b.26.1.2 | Back alignment and structure |
|---|
| >4egx_A Kinesin-like protein KIF1A; FHA domain, transport protein; 2.51A {Homo sapiens} | Back alignment and structure |
|---|
| >1ujx_A Polynucleotide kinase 3'-phosphatase; DNA repair, FHA domain, beta-sandwich, antiparallel beta-sheets, phosphopeptide binding motif; NMR {Mus musculus} SCOP: b.26.1.2 | Back alignment and structure |
|---|
| >2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A* | Back alignment and structure |
|---|
| >3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
| >2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A* | Back alignment and structure |
|---|
| >2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A | Back alignment and structure |
|---|
| >1wv3_A Similar to DNA segregation ATPase and related proteins; structural genomics, unknown function; 1.75A {Staphylococcus aureus subsp} SCOP: b.26.1.4 b.26.1.4 | Back alignment and structure |
|---|
| >2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A* | Back alignment and structure |
|---|
| >3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 365 | ||||
| d1uhta_ | 118 | b.26.1.2 (A:) FHA domain containing protein At4G14 | 1e-09 | |
| d1mzka_ | 122 | b.26.1.2 (A:) Kinase associated protein phosphatas | 2e-09 | |
| d3c96a1 | 288 | c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Ps | 1e-07 | |
| d1dmza_ | 158 | b.26.1.2 (A:) Phosphotyrosine binding domain of Ra | 3e-07 | |
| d1pn0a1 | 360 | c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {So | 7e-07 | |
| d1g6ga_ | 127 | b.26.1.2 (A:) Phosphotyrosine binding domain of Ra | 6e-06 | |
| d2piea1 | 127 | b.26.1.2 (A:13-139) Ubiquitin ligase protein RNF8 | 7e-06 | |
| d2affa1 | 98 | b.26.1.2 (A:3-100) Antigen ki-67 {Human (Homo sapi | 8e-06 | |
| d1gxca_ | 116 | b.26.1.2 (A:) Chk2 kinase {Human (Homo sapiens) [T | 2e-05 | |
| d2g1la1 | 102 | b.26.1.2 (A:498-599) Kinesin-like protein kif1c {H | 3e-05 | |
| d2voua1 | 265 | c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydr | 4e-05 | |
| d1wlna1 | 107 | b.26.1.2 (A:8-114) Afadin {Mouse (Mus musculus) [T | 7e-05 |
| >d1uhta_ b.26.1.2 (A:) FHA domain containing protein At4G14490 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 118 | Back information, alignment and structure |
|---|
class: All beta proteins fold: SMAD/FHA domain superfamily: SMAD/FHA domain family: FHA domain domain: FHA domain containing protein At4G14490 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 53.1 bits (127), Expect = 1e-09
Identities = 18/91 (19%), Positives = 28/91 (30%), Gaps = 9/91 (9%)
Query: 252 HENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEG 311
+G + I I A +S H RI G + + DL S +GT + N
Sbjct: 30 KPGSTIRVGRIVRGN----EIAIKDAGISTKHLRIESDSGNWVIQDLGSSNGTLLNSN-- 83
Query: 312 RRYRVSSNFPARFRPSDTIEFGSDKKAIFRV 342
+ D I+ G +
Sbjct: 84 ---ALDPETSVNLGDGDVIKLGEYTSILVNF 111
|
| >d1mzka_ b.26.1.2 (A:) Kinase associated protein phosphatase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 122 | Back information, alignment and structure |
|---|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} Length = 288 | Back information, alignment and structure |
|---|
| >d1dmza_ b.26.1.2 (A:) Phosphotyrosine binding domain of Rad53 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 158 | Back information, alignment and structure |
|---|
| >d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]} Length = 360 | Back information, alignment and structure |
|---|
| >d1g6ga_ b.26.1.2 (A:) Phosphotyrosine binding domain of Rad53 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 127 | Back information, alignment and structure |
|---|
| >d2piea1 b.26.1.2 (A:13-139) Ubiquitin ligase protein RNF8 {Human (Homo sapiens) [TaxId: 9606]} Length = 127 | Back information, alignment and structure |
|---|
| >d2affa1 b.26.1.2 (A:3-100) Antigen ki-67 {Human (Homo sapiens) [TaxId: 9606]} Length = 98 | Back information, alignment and structure |
|---|
| >d1gxca_ b.26.1.2 (A:) Chk2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 116 | Back information, alignment and structure |
|---|
| >d2g1la1 b.26.1.2 (A:498-599) Kinesin-like protein kif1c {Human (Homo sapiens) [TaxId: 9606]} Length = 102 | Back information, alignment and structure |
|---|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} Length = 265 | Back information, alignment and structure |
|---|
| >d1wlna1 b.26.1.2 (A:8-114) Afadin {Mouse (Mus musculus) [TaxId: 10090]} Length = 107 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 365 | |||
| d1uhta_ | 118 | FHA domain containing protein At4G14490 {Thale cre | 99.85 | |
| d2ff4a3 | 99 | Probable regulatory protein EmbR, C-terminal domai | 99.85 | |
| d1mzka_ | 122 | Kinase associated protein phosphatase {Thale cress | 99.83 | |
| d2piea1 | 127 | Ubiquitin ligase protein RNF8 {Human (Homo sapiens | 99.81 | |
| d2affa1 | 98 | Antigen ki-67 {Human (Homo sapiens) [TaxId: 9606]} | 99.79 | |
| d1gxca_ | 116 | Chk2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 99.74 | |
| d1lgpa_ | 113 | Cell cycle checkpoint protein Chfr {Human (Homo sa | 99.73 | |
| d2brfa1 | 101 | Polynucleotide kinase 3'-phosphatase {Human (Homo | 99.72 | |
| d1g6ga_ | 127 | Phosphotyrosine binding domain of Rad53 {Baker's y | 99.72 | |
| d1dmza_ | 158 | Phosphotyrosine binding domain of Rad53 {Baker's y | 99.68 | |
| d1wlna1 | 107 | Afadin {Mouse (Mus musculus) [TaxId: 10090]} | 99.65 | |
| d2g1la1 | 102 | Kinesin-like protein kif1c {Human (Homo sapiens) [ | 99.6 | |
| d1pn0a1 | 360 | Phenol hydroxylase {Soil-living yeast (Trichosporo | 99.6 | |
| d3c96a1 | 288 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 99.24 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 97.71 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 97.44 | |
| d1b5qa1 | 347 | Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | 97.35 | |
| d2gmha1 | 380 | Electron transfer flavoprotein-ubiquinone oxidored | 95.74 | |
| d3c96a2 | 111 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 95.01 |
| >d1uhta_ b.26.1.2 (A:) FHA domain containing protein At4G14490 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: SMAD/FHA domain superfamily: SMAD/FHA domain family: FHA domain domain: FHA domain containing protein At4G14490 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.85 E-value=2.6e-21 Score=156.62 Aligned_cols=92 Identities=21% Similarity=0.310 Sum_probs=78.0
Q ss_pred ccEEEeecCCCCCEEEcCCCCCCCCcceEEeCCccccccceEEEEECCEEEEEEcCCCccceeeCCCCceeeecCCCcEE
Q 017856 244 QPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPAR 323 (365)
Q Consensus 244 ~~i~l~~~~~~~~~~IGR~~~~~~~~~di~l~~~~VSr~Ha~i~~~~~~~~i~Dl~S~nGT~vng~~~~~~~l~~~~~~~ 323 (365)
+.+.|. . +..++|||.... |||+++++.|||+||+|.++++.|+|+|++|+|||||||. +|.++.+++
T Consensus 25 ~~~~l~-~--~~~~~iGR~~~~----~di~l~d~~VSr~Ha~i~~~~~~~~i~Dl~S~nGT~vng~-----~l~~~~~~~ 92 (118)
T d1uhta_ 25 DALDYK-P--GSTIRVGRIVRG----NEIAIKDAGISTKHLRIESDSGNWVIQDLGSSNGTLLNSN-----ALDPETSVN 92 (118)
T ss_dssp CBCCBC-T--TCCEEEESSSTT----CSEECCSSSSCTTCEEEEECSSSEEEECCCCSSCCEESSS-----BCCTTCEEE
T ss_pred cEEEeC-C--CCEEEECCCCcC----CeEEeCccCcchheeEEEEECCEEEEEECCCcceeEECCE-----EcCCCcEEE
Confidence 778886 2 345899997533 9999999999999999999999999999999999999999 999899999
Q ss_pred eCCCCEEEECCCceeEEEEEEecCCCC
Q 017856 324 FRPSDTIEFGSDKKAIFRVKVIGTPPN 350 (365)
Q Consensus 324 L~~Gd~I~~G~~~~~~f~~~~~~~~p~ 350 (365)
|++||+|+||.. .|.+....+.|.
T Consensus 93 L~~Gd~i~lG~~---~~~~v~~~~~p~ 116 (118)
T d1uhta_ 93 LGDGDVIKLGEY---TSILVNFVSGPS 116 (118)
T ss_dssp CCTTEEEEETTT---EEEEEEEECSSC
T ss_pred CCCCCEEEECCE---EEEEEEecCCCC
Confidence 999999999998 444444334443
|
| >d2ff4a3 b.26.1.2 (A:284-382) Probable regulatory protein EmbR, C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1mzka_ b.26.1.2 (A:) Kinase associated protein phosphatase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d2piea1 b.26.1.2 (A:13-139) Ubiquitin ligase protein RNF8 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2affa1 b.26.1.2 (A:3-100) Antigen ki-67 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1gxca_ b.26.1.2 (A:) Chk2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1lgpa_ b.26.1.2 (A:) Cell cycle checkpoint protein Chfr {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2brfa1 b.26.1.2 (A:8-108) Polynucleotide kinase 3'-phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1g6ga_ b.26.1.2 (A:) Phosphotyrosine binding domain of Rad53 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1dmza_ b.26.1.2 (A:) Phosphotyrosine binding domain of Rad53 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1wlna1 b.26.1.2 (A:8-114) Afadin {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2g1la1 b.26.1.2 (A:498-599) Kinesin-like protein kif1c {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]} | Back information, alignment and structure |
|---|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
| >d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
| >d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
| >d3c96a2 d.16.1.2 (A:183-293) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|