Citrus Sinensis ID: 017898
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 364 | ||||||
| 225458432 | 355 | PREDICTED: uncharacterized protein LOC10 | 0.975 | 1.0 | 0.613 | 1e-118 | |
| 255538514 | 339 | conserved hypothetical protein [Ricinus | 0.925 | 0.994 | 0.612 | 1e-116 | |
| 356519084 | 356 | PREDICTED: uncharacterized protein LOC10 | 0.972 | 0.994 | 0.565 | 1e-111 | |
| 356510304 | 356 | PREDICTED: uncharacterized protein LOC10 | 0.967 | 0.988 | 0.560 | 1e-111 | |
| 449476766 | 345 | PREDICTED: uncharacterized LOC101207359 | 0.818 | 0.863 | 0.657 | 1e-110 | |
| 449460131 | 345 | PREDICTED: uncharacterized protein LOC10 | 0.818 | 0.863 | 0.654 | 1e-110 | |
| 255647675 | 356 | unknown [Glycine max] | 0.972 | 0.994 | 0.552 | 1e-107 | |
| 15221197 | 340 | uncharacterized protein [Arabidopsis tha | 0.818 | 0.876 | 0.621 | 1e-105 | |
| 297847108 | 331 | hypothetical protein ARALYDRAFT_473986 [ | 0.909 | 1.0 | 0.558 | 1e-105 | |
| 8778686 | 343 | T1N15.7 [Arabidopsis thaliana] | 0.818 | 0.868 | 0.618 | 1e-104 |
| >gi|225458432|ref|XP_002283812.1| PREDICTED: uncharacterized protein LOC100245429 [Vitis vinifera] gi|302142414|emb|CBI19617.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/362 (61%), Positives = 269/362 (74%), Gaps = 7/362 (1%)
Query: 3 MEVQSVCRGLQLPKFKSSNCGFLSHQFVSPSASQFGSRSQSIRFGNAYKFLGNTFPNLKH 62
ME+QS+ L P + LSH+ VS ++ + Q RF K + P LK
Sbjct: 1 MELQSISCWLPSPDMRLCIHRPLSHRIVSTGHVRW--KDQRFRFEKVLK--SSLMPGLKK 56
Query: 63 KIEGYSAWSSKRGAILCASNSGSDTKLGFPSGENSSLPVAIFNGPEPFRGKSGSVSFCGL 122
+ S S RGA LC+ NS SD KL + E +S+ F+G EPFRGKSGSVSF GL
Sbjct: 57 EC---SLSSFGRGATLCSLNSNSDAKLKYSGREITSVSGNGFDGVEPFRGKSGSVSFHGL 113
Query: 123 THQLVEEGKLMSAPFQEDKGSFLWILAPVVLISSLILPQMFLGNVIEDFIKDNLLMEIVS 182
THQ VEE KL S+PF+E GSFLW+LAPV LISSL+LPQ FL + IE +KD +L EIV+
Sbjct: 114 THQRVEESKLASSPFKEGTGSFLWVLAPVALISSLVLPQFFLDSAIEAILKDEVLAEIVA 173
Query: 183 SLTFESMFYVGLAIFLRITDRVQRPYLQFSPKRWGLITGLRGYLTSAFFTTGLKVVAPLF 242
++ E+MFY+GLA FL +TD VQRPYLQFSPKRWGLITGL+GYLT+AFFT G K+ AP F
Sbjct: 174 TIFSEAMFYIGLATFLHVTDHVQRPYLQFSPKRWGLITGLKGYLTTAFFTMGFKIFAPFF 233
Query: 243 AVYVTWPVLRLPALVAVLPFLVGCAAQLAFETNLDKRGSSCWPLIPIIFEVYRLYQLSKA 302
AVYVTWPVL ALVAV PFLVGCAAQLAFE L KRGSSCWPL+PIIFEVYRLYQLSKA
Sbjct: 234 AVYVTWPVLGPSALVAVAPFLVGCAAQLAFEMRLSKRGSSCWPLVPIIFEVYRLYQLSKA 293
Query: 303 ANFIERLMFSMKDLPRSPELLERGSAMVSMVVIFQILGVVCLWSLLTFLLRLFPSRPVAE 362
A+F++ L+ +MK+ P +P+++ER A+V+MVV FQ+LG+VCLWSL+TFL+RLFPSRPVAE
Sbjct: 294 AHFMDILILAMKEAPVTPDIVERSGALVAMVVTFQVLGLVCLWSLMTFLMRLFPSRPVAE 353
Query: 363 NY 364
NY
Sbjct: 354 NY 355
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255538514|ref|XP_002510322.1| conserved hypothetical protein [Ricinus communis] gi|223551023|gb|EEF52509.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|356519084|ref|XP_003528204.1| PREDICTED: uncharacterized protein LOC100780682 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356510304|ref|XP_003523879.1| PREDICTED: uncharacterized protein LOC100805065 [Glycine max] | Back alignment and taxonomy information |
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| >gi|449476766|ref|XP_004154828.1| PREDICTED: uncharacterized LOC101207359 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449460131|ref|XP_004147799.1| PREDICTED: uncharacterized protein LOC101207359 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|255647675|gb|ACU24299.1| unknown [Glycine max] | Back alignment and taxonomy information |
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| >gi|15221197|ref|NP_175279.1| uncharacterized protein [Arabidopsis thaliana] gi|56381889|gb|AAV85663.1| At1g48460 [Arabidopsis thaliana] gi|57222220|gb|AAW39017.1| At1g48460 [Arabidopsis thaliana] gi|332194175|gb|AEE32296.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|297847108|ref|XP_002891435.1| hypothetical protein ARALYDRAFT_473986 [Arabidopsis lyrata subsp. lyrata] gi|297337277|gb|EFH67694.1| hypothetical protein ARALYDRAFT_473986 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|8778686|gb|AAF79694.1|AC020889_2 T1N15.7 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 364 | ||||||
| TAIR|locus:2198070 | 340 | AT1G48460 "AT1G48460" [Arabido | 0.832 | 0.891 | 0.542 | 1.2e-85 | |
| TAIR|locus:2166330 | 366 | AT5G63040 "AT5G63040" [Arabido | 0.623 | 0.620 | 0.294 | 8.7e-24 |
| TAIR|locus:2198070 AT1G48460 "AT1G48460" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 825 (295.5 bits), Expect = 1.2e-85, Sum P(2) = 1.2e-85
Identities = 171/315 (54%), Positives = 210/315 (66%)
Query: 55 NTFPNLKHKIEGYSA--WSS---KRGAILCASNSGSDTKLGFPSGENSSLPVAIFNGPEP 109
+TF +HK++ W+ R + C+S S SD++ + S+ A E
Sbjct: 33 STFAT-RHKLDSRQTLLWNKPQLSRVRVACSS-SQSDSRPEKKQSDKSNYARA-----EL 85
Query: 110 FRGKSGSVSFCGLTHQLVEEGKLMSAPFQEDKGSFLWILAPVVLISSLILPQMFLGNVIE 169
FRGKSGSVSF GLTHQLVEE KL+SAPFQE+KGSFLW+LAPVVLISSLILPQ FL +IE
Sbjct: 86 FRGKSGSVSFNGLTHQLVEESKLVSAPFQEEKGSFLWVLAPVVLISSLILPQFFLSGIIE 145
Query: 170 DFIKDNLLMEIVSSLTFESMFYVGLAIFLRITDRVQRPYLQFSPKRWGLITGLRGYLTSA 229
K++ + EIV+S FE++FY GLAIFL +TDRVQRPYL FS KRWGLITGLRGYLTSA
Sbjct: 146 ATFKNDTVAEIVTSFCFETVFYAGLAIFLSVTDRVQRPYLDFSSKRWGLITGLRGYLTSA 205
Query: 230 FFTTGLKVVAPLFAVYVTWXXXXXXXXXXXXXXXXGCAAQLAFETNLDKRGSSCWPLIPI 289
F T GLKVV P+FAVY+TW GCA Q FE L++RGSSCWP++PI
Sbjct: 206 FLTMGLKVVVPVFAVYMTWPALGIDALIAVLPFLVGCAVQRVFEARLERRGSSCWPIVPI 265
Query: 290 IFEVYRLYQLSKAANFIERLMFSMKDLPRSPELLERGSAMVSMVVIFQILGVVCXXXXXX 349
+FEVYRLYQ+++AA F++RLMF MKD + E+ ERG A+V +VV Q L V+C
Sbjct: 266 VFEVYRLYQVTRAATFVQRLMFMMKDAATTAEITERGVALVGLVVTLQFLAVMCLWSFIT 325
Query: 350 XXXXXXXXXXVAENY 364
V ENY
Sbjct: 326 FLMRLFPSRPVGENY 340
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| TAIR|locus:2166330 AT5G63040 "AT5G63040" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00014708001 | SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (305 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
No hit with probability above 80.00
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 364 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-07 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
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Score = 50.6 bits (120), Expect = 5e-07
Identities = 47/314 (14%), Positives = 85/314 (27%), Gaps = 105/314 (33%)
Query: 103 IFNGPEPFRGKSGSVSFCGLTHQLVEEGKLMSAPFQEDKGSFL--------WILAPVVLI 154
++N + F +VS +L + L+ + K + +A V +
Sbjct: 119 LYNDNQVFA--KYNVSRLQPYLKLRQ--ALLEL--RPAKNVLIDGVLGSGKTWVALDVCL 172
Query: 155 SSLILPQMF-------LGNVIEDFIKDNLLMEIVSSL--TFESMFYVGLAIFLRITDRVQ 205
S + +M L N ++E++ L + + I R+
Sbjct: 173 SYKVQCKMDFKIFWLNLKNCNSP----ETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIH 228
Query: 206 ------RPYLQFSPKRWGLITGLR----GYLTSAF-------FTTGLKVVA--------- 239
R L+ P L+ L +AF TT K V
Sbjct: 229 SIQAELRRLLKSKPYENCLLV-LLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTT 287
Query: 240 -----------------PLFAVYVTWPVLRLPALV-AVLPFLVG-CAAQLAFETNLDKRG 280
L Y+ LP V P + A + + G
Sbjct: 288 HISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESI-------RDG 340
Query: 281 SSCWPLIPIIFEVYRLYQLSKAANFIERLMFSMKDLPRSPELLERGSAMVSMVVIF---- 336
+ W + ++ K IE S+ L P + M + +F
Sbjct: 341 LATW-------DNWKHVNCDKLTTIIES---SLNVL--EPAEYRK---MFDRLSVFPPSA 385
Query: 337 ----QILGVVCLWS 346
+L + +W
Sbjct: 386 HIPTILLSL--IWF 397
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Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00