Citrus Sinensis ID: 018068

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-
Protein Sequence
MAAKAFVVHFSAAKPSKEPFYRYPDCLSTSQSLPLKSLSVNKPAGKLNNVLFISHYTLATLHRRLSPVSAGDSDVPHPFHQESANFRSNKAFEEWNSLTAKFSGAANIPFMLLQLPQIILNARNLLAGNKAALLAVPWLGMLTGLLGNLSLLSYFIKKREKEAIVVQTLGVVSTYVVISQLAVGEAMPMPHFIAISVVVATGLVLNFLNYFNMLNAGLWRFWEDVITVGGLTALPQVIWSTFVPTIPNSILPGTIAFVVGVATVVMARMGKLSKQGVKFVRAISGWTATLLFMWMPVSQMWTNFLNPDNIKGLSASSMLLAMIGNGLLIPRALFIRDFMWFTGSSWATLFYGYGNLVCLYW
Secondary Structure (PSIPRED)
ccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccccHHcccHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEcHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHccHHHHHHHHHHHcHHHHHHccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHEEEcccHHHHHHHcHHHEEEEcc
Secondary Structure Prediction (SSPRO)
cccEEEEEEEccccccccccEcccccccccccccccEccccccccccccccccccccccHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MAAKAFVVHfsaakpskepfyrypdclstsqslplkslsvnkpagklnnvLFISHYTLATLHrrlspvsagdsdvphpfhqesanfrsnkAFEEWNSLTakfsgaanipfmllQLPQIILNARNLLAGNKAALLAVPWLGMLTGLLGNLSLLSYFIKKREKEAIVVQTLGVVSTYVVISQLavgeampmpHFIAISVVVATGLVLNFLNYFNMLNAGLWRFWEDVitvggltalpqviwstfvptipnsilpgtIAFVVGVATVVMARMGKLSKQGVKFVRAISGWTATLLFMWMPVSQMwtnflnpdnikglSASSMLLAMIGNGLLIPRALFIRdfmwftgssWATLFYGYgnlvclyw
Flexible Loop (DISEMBL)
MAAKAFVVhfsaakpskepfyRYPDCLSTSQSLPLKSLSVNKPAGKLNNVLFISHYTLATLHRRLSPVSAGDSDVPHPFHQESANFRSNKAFEEWNSLTAKFSGAANIPFMLLQLPQIILNARNLLAGNKAALLAVPWLGMLTGLLGNLSLLSYFIKKREKEAIVVQTLGVVSTYVVISQLAVGEAMPMPHFIAISVVVATGLVLNFLNYFNMLNAGLWRFWEDVITVGGLTALPQVIWSTFVPTIPNSILPGTIAFVVGVATVVMARMGKLSKQGVKFVRAISGWTATLLFMWMPVSQMWTNFLNPDNIKGLSASSMLLAMIGNGLLIPRALFIRDFMWFTGSSWATLFYGYGNLVCLYW
Low Complexity Region (SEG)
MAAKAFVVHFSAAKPSKEPFYRYPDCLSTSQSLPLKSLSVNKPAGKLNNVLFISHYTLATLHRRLSPVSAGDSDVPHPFHQESANFRSNKAFEEWNSLTAKFSGAANIPFMLLQLPQIIlnarnllagnkaallaVPWlgmltgllgnlsllSYFIKKREKEAIVVQTLGVVSTYVVISQLAVGEAMPMPHFIAISVVVATGLVLNFLNYFNMLNAGLWRFWEDVITVGGLTALPQVIWSTFVPTIPNSILPGTIAFVVGVATVVMARMGKLSKQGVKFVRAISGWTATLLFMWMPVSQMWTNFLNPDNIKGLSASSMLLAMIGNGLLIPRALFIRDFMWFTGSSWATLFYGYGNLVCLYW
Disordered region (IsUnstruct)
*****FVVHF*********FYRYPDCLS***********VNKPAGKLNNVLFISHYTLATLHRRL*************************AFEEWNSLTAKFSGAANIPFMLLQLPQIILNARNLLAGNKAALLAVPWLGMLTGLLGNLSLLSYFIKKREKEAIVVQTLGVVSTYVVISQLAVGEAMPMPHFIAISVVVATGLVLNFLNYFNMLNAGLWRFWEDVITVGGLTALPQVIWSTFVPTIPNSILPGTIAFVVGVATVVMARMGKLSKQGVKFVRAISGWTATLLFMWMPVSQMWTNFLNPDNIKGLSASSMLLAMIGNGLLIPRALFIRDFMWFTGSSWATLFYGYGNLVCLYW
Disordered Region (DISOPRED)
****A****FSAAKPSKEPFYRYPDCLSTSQSLPLKSLSVNKPAGKLNNVLFISHYTLATLHRRLS**************************EEWNSLTAKFSGAANIPFMLLQLPQIILNARNLLAGNKAALLAVPWLGMLTGLLGNLSLLSYFIKKREKEAIVVQTLGVVSTYVVISQLAVGEAMPMPHFIAISVVVATGLVLNFLNYFNMLNAGLWRFWEDVITVGGLTALPQVIWSTFVPTIPNSILPGTIAFVVGVATVVMARMGKLSKQGVKFVRAISGWTATLLFMWMPVSQMWTNFLNPDNIKGLSASSMLLAMIGNGLLIPRALFIRDFMWFTGSSWATLFYGYGNLVCLYW
Disordered Region (DISEMBL)
MAAKAFVVHFSAAKPSKEPFYRYPDCLSTSQSLPLKSLSVNKPAGKLNNVLFISHYTLATLHRRLSPVSAGDSDVPHPFHQESANFRSNKAFEEWNSLTAKFSGAANIPFMLLQLPQIILNARNLLAGNKAALLAVPWLGMLTGLLGNLSLLSYFIKKREKEAIVVQTLGVVSTYVVISQLAVGEAMPMPHFIAISVVVATGLVLNFLNYFNMLNAGLWRFWEDVITVGGLTALPQVIWSTFVPTIPNSILPGTIAFVVGVATVVMARMGKLSKQGVKFVRAISGWTATLLFMWMPVSQMWTNFLNPDNIKGLSASSMLLAMIGNGLLIPRALFIRDFMWFTGSSWATLFYGYGNLVCLYW
Disordered Region (DISPRO)
**AKAFVVHFSAAKPSKEPFYRYPDCLSTSQSLPLKSLSVNKPAGKLNNVLFISHYTLATLHRRLSPVSAGDSDVPHPFHQESANFRSNKAFEEWNSLTAKFSGAANIPFMLLQLPQIILNARNLLAGNKAALLAVPWLGMLTGLLGNLSLLSYFIKKREKEAIVVQTLGVVSTYVVISQLAVGEAMPMPHFIAISVVVATGLVLNFLNYFNMLNAGLWRFWEDVITVGGLTALPQVIWSTFVPTIPNSILPGTIAFVVGVATVVMARMGKLSKQGVKFVRAISGWTATLLFMWMPVSQMWTNFLNPDNIKGLSASSMLLAMIGNGLLIPRALFIRDFMWFTGSSWATLFYGYGNLVCLYW
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHoooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAAKAFVVHFSAAKPSKEPFYRYPDCLSTSQSLPLKSLSVNKPAGKLNNVLFISHYTLATLHRRLSPVSAGDSDVPHPFHQESANFRSNKAFEEWNSLTAKFSGAANIPFMLLQLPQIILNARNLLAGNKAALLAVPWLGMLTGLLGNLSLLSYFIKKREKEAIVVQTLGVVSTYVVISQLAVGEAMPMPHFIAISVVVATGLVLNFLNYFNMLNAGLWRFWEDVITVGGLTALPQVIWSTFVPTIPNSILPGTIAFVVGVATVVMARMGKLSKQGVKFVRAISGWTATLLFMWMPVSQMWTNFLNPDNIKGLSASSMLLAMIGNGLLIPRALFIRDFMWFTGSSWATLFYGYGNLVCLYW
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	361	2.2.26 [Sep-21-2011]
Q9LF50	415	Maltose excess protein 1,	yes	no	0.908	0.790	0.644	1e-114
Q7XTQ5	399	Maltose excess protein 1-	yes	no	0.855	0.774	0.648	1e-104

>sp|Q9LF50|MEX1_ARATH Maltose excess protein 1, chloroplastic OS=Arabidopsis thaliana GN=MEX1 PE=1 SV=2

 Score =  413 bits (1062), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 216/335 (64%), Positives = 262/335 (78%), Gaps = 7/335 (2%)

Query: 32  SLPLKSLSVNKPAGKLNNVLFISHYTLATLHRRLSPV------SAGDSDVPHPFHQESAN 85
           SLPLK  S+   A   + V  ++ +      RRL PV      S  DSD PH   Q +  
Sbjct: 34  SLPLKRASIGG-AVSCSGVNGLTRWNSIVSTRRLVPVRSINSESDSDSDFPHENQQGNPG 92

Query: 86  FRSNKAFEEWNSLTAKFSGAANIPFMLLQLPQIILNARNLLAGNKAALLAVPWLGMLTGL 145
               K ++EW+S TAKFSG ANIPF++LQLPQIILN +NLLAGN  AL AVPWLGMLTGL
Sbjct: 93  LGKFKEYQEWDSWTAKFSGGANIPFLMLQLPQIILNTQNLLAGNNTALSAVPWLGMLTGL 152

Query: 146 LGNLSLLSYFIKKREKEAIVVQTLGVVSTYVVISQLAVGEAMPMPHFIAISVVVATGLVL 205
           LGNLSLLSYF KKREKEA VVQTLGVVST++V++QL + EAMP+ +F+A S VV  GL++
Sbjct: 153 LGNLSLLSYFAKKREKEAAVVQTLGVVSTHIVLAQLTMAEAMPIQYFVATSAVVTIGLIV 212

Query: 206 NFLNYFNMLNAGLWRFWEDVITVGGLTALPQVIWSTFVPTIPNSILPGTIAFVVGVATVV 265
           N L YF  L+  +W+ WEDVIT+GGL+ LPQ++WSTFVP +PNSILPGT AF + VA ++
Sbjct: 213 NCLYYFGKLSKTVWQLWEDVITIGGLSVLPQIMWSTFVPLVPNSILPGTTAFGIAVAAII 272

Query: 266 MARMGKLSKQGVKFVRAISGWTATLLFMWMPVSQMWTNFLNPDNIKGLSASSMLLAMIGN 325
           MAR GKLS++GV+FV ++SGWTATL+FMWMPVSQMWTNFLNPDNIKGLS+ +MLL+M+GN
Sbjct: 273 MARTGKLSEKGVRFVGSLSGWTATLMFMWMPVSQMWTNFLNPDNIKGLSSITMLLSMMGN 332

Query: 326 GLLIPRALFIRDFMWFTGSSWATLFYGYGNLVCLY 360
           GL+IPRALFIRD MW TGS WATLFYGYGN++CLY
Sbjct: 333 GLMIPRALFIRDLMWLTGSLWATLFYGYGNILCLY 367

Probable maltose transporter. Essential for the conversion of starch to sucrose in leaves at night, probably via the export of maltose from the chloroplast. Required for root cap cells formation.
Arabidopsis thaliana (taxid: 3702)

>sp|Q7XTQ5|MEX1_ORYSJ Maltose excess protein 1-like, chloroplastic OS=Oryza sativa subsp. japonica GN=Os04g0602400 PE=2 SV=2

 Score =  377 bits (969), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 214/330 (64%), Positives = 253/330 (76%), Gaps = 21/330 (6%)

Query: 35  LKSLSVNKPAGKLNNVLFISHYTLATLHRR----LSPVSAGDSDVPHPFHQESANFRSNK 90
           +K LS   PA         S+ +   LHRR    L PV+A  +  P          +  K
Sbjct: 39  VKPLSCRAPA---------SYRSALLLHRRRRYALPPVAATATSKPV--------LKDPK 81

Query: 91  AFEEWNSLTAKFSGAANIPFMLLQLPQIILNARNLLAGNKAALLAVPWLGMLTGLLGNLS 150
            ++EW+SLTAKF+GAAN+PF+LLQLPQIILNARNLLAGNK AL AVPWLGMLTGLLGNLS
Sbjct: 82  KYQEWDSLTAKFAGAANVPFLLLQLPQIILNARNLLAGNKTALFAVPWLGMLTGLLGNLS 141

Query: 151 LLSYFIKKREKEAIVVQTLGVVSTYVVISQLAVGEAMPMPHFIAISVVVATGLVLNFLNY 210
           LLSYF KK+E  A++VQTLGV+STYVVI+QLA+ E+MP+P F+A S VVA GL+LNFLNY
Sbjct: 142 LLSYFAKKKETGAVIVQTLGVISTYVVIAQLAMAESMPLPQFVATSAVVAAGLLLNFLNY 201

Query: 211 FNMLNAGLWRFWEDVITVGGLTALPQVIWSTFVPTIPNSILPGTIAFVVGVATVVMARMG 270
           F  L   LW  WED IT+GGL  LPQV+WSTFVP IPNS+LPG I+  +    VVMARMG
Sbjct: 202 FGWLPGTLWLLWEDFITIGGLAVLPQVMWSTFVPFIPNSLLPGIISGSLAATAVVMARMG 261

Query: 271 KLSKQGVKFVRAISGWTATLLFMWMPVSQMWTNFLNPDNIKGLSASSMLLAMIGNGLLIP 330
           KLSK G+ FV ++SGWTATLLFMWMPV+QMWTN+LNP NIKGLSA +MLLAMIGNGL+IP
Sbjct: 262 KLSKGGINFVGSLSGWTATLLFMWMPVAQMWTNYLNPSNIKGLSAFTMLLAMIGNGLMIP 321

Query: 331 RALFIRDFMWFTGSSWATLFYGYGNLVCLY 360
           RA+FIRD MWFTGS+WA+   G+GNL C+Y
Sbjct: 322 RAVFIRDLMWFTGSAWASFLQGWGNLACMY 351


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.324    0.137    0.424 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 127,566,357
Number of Sequences: 539616
Number of extensions: 4914517
Number of successful extensions: 15161
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 15156
Number of HSP's gapped (non-prelim): 12
length of query: 361
length of database: 191,569,459
effective HSP length: 119
effective length of query: 242
effective length of database: 127,355,155
effective search space: 30819947510
effective search space used: 30819947510
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)

Probable maltose transporter. Essential for the conversion of starch to sucrose in leaves at night, probably via the export of maltose from the chloroplast.

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	361
449468285	413	PREDICTED: maltose excess protein 1, chl	0.966	0.845	0.643	1e-124
109895092	425	maltose transporter [Malus x domestica]	0.900	0.764	0.745	1e-123
225454603	405	PREDICTED: maltose excess protein 1, chl	0.844	0.753	0.737	1e-120
312282879	415	unnamed protein product [Thellungiella h	0.839	0.730	0.709	1e-118
356543074	411	PREDICTED: maltose excess protein 1, chl	0.806	0.708	0.734	1e-118
6137140	415	root cap 1 [Arabidopsis thaliana] gi|215	0.994	0.865	0.605	1e-113
18418329	415	Maltose excess protein 1 [Arabidopsis th	0.908	0.790	0.644	1e-113
297811901	413	root cap 1 [Arabidopsis lyrata subsp. ly	0.994	0.869	0.606	1e-112
357168381	408	PREDICTED: maltose excess protein 1-like	0.792	0.700	0.671	1e-112
147833469	420	hypothetical protein VITISV_021270 [Viti	0.786	0.676	0.735	1e-109

>gi|449468285|ref|XP_004151852.1| PREDICTED: maltose excess protein 1, chloroplastic-like [Cucumis sativus] gi|449484009|ref|XP_004156757.1| PREDICTED: maltose excess protein 1, chloroplastic-like [Cucumis sativus]

 Score =  450 bits (1157), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 229/356 (64%), Positives = 275/356 (77%), Gaps = 7/356 (1%)

Query: 12  AAKPSKEPFYRYPDCLSTSQSLPLKSLSVNKPAGKLN--NVLFISHY-----TLATLHRR 64
           A+  +  P  R P    ++ S+PLK +S++ P    N  N   +         L   +RR
Sbjct: 10  ASNGATPPLRRNPLGFYSAASIPLKPISLSLPLNNKNPHNCFCLKQVLPYSSRLNLPNRR 69

Query: 65  LSPVSAGDSDVPHPFHQESANFRSNKAFEEWNSLTAKFSGAANIPFMLLQLPQIILNARN 124
            +PV+A DSD PH  HQ S   R +K FEEWNSLTAKFS AANIPFMLLQLPQIILNARN
Sbjct: 70  FTPVAAVDSDAPHSHHQGSETLRDSKRFEEWNSLTAKFSAAANIPFMLLQLPQIILNARN 129

Query: 125 LLAGNKAALLAVPWLGMLTGLLGNLSLLSYFIKKREKEAIVVQTLGVVSTYVVISQLAVG 184
           LLAGN  ALLAVPWLGMLTGLLGNL+LLSYF KKREKEA+V+QTLG V+TY+V +QL++ 
Sbjct: 130 LLAGNTTALLAVPWLGMLTGLLGNLALLSYFAKKREKEAMVIQTLGAVTTYIVFAQLSIA 189

Query: 185 EAMPMPHFIAISVVVATGLVLNFLNYFNMLNAGLWRFWEDVITVGGLTALPQVIWSTFVP 244
            AMP+P+F A S VVA+GL++NF+N+FN+L   + +FWED ITVGG + LPQV+WSTFVP
Sbjct: 190 GAMPLPYFAATSAVVASGLLINFMNFFNILPIQILKFWEDFITVGGFSILPQVMWSTFVP 249

Query: 245 TIPNSILPGTIAFVVGVATVVMARMGKLSKQGVKFVRAISGWTATLLFMWMPVSQMWTNF 304
            IPNSILPG  A V  +  V +AR GKL ++GVKFV A+SGWTATLLFMWMPVSQMWTN+
Sbjct: 250 FIPNSILPGATALVTALLAVALARAGKLPEKGVKFVGALSGWTATLLFMWMPVSQMWTNY 309

Query: 305 LNPDNIKGLSASSMLLAMIGNGLLIPRALFIRDFMWFTGSSWATLFYGYGNLVCLY 360
           LNP+NIKGLSA +MLLA+IGNGL++PRALFIRDFMWF GS WA LFYGY N++CLY
Sbjct: 310 LNPENIKGLSALTMLLALIGNGLVLPRALFIRDFMWFLGSGWAILFYGYANILCLY 365

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|109895092|gb|ABG47411.1| maltose transporter [Malus x domestica]

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 246/330 (74%), Positives = 280/330 (84%), Gaps = 5/330 (1%)

Query: 36  KSLSVNKPAGKLNNVLFISHYTLA---TLHRRLSPVSAGDSDVPHPFHQ-ESANFRSNKA 91
            +LSV+  AG+    LF S++ L     L RR S +SA DSDVPHP HQ    +  S  +
Sbjct: 50  NTLSVSSSAGQGQCFLFKSYHPLPLRLPLQRR-STLSALDSDVPHPLHQGSVKSSSSKTS 108

Query: 92  FEEWNSLTAKFSGAANIPFMLLQLPQIILNARNLLAGNKAALLAVPWLGMLTGLLGNLSL 151
           FE+WNS TAKFSGA+NIPF+LLQ+PQI LNA+NLLAGNKAALLAVPW+GM TGLLGNLSL
Sbjct: 109 FEQWNSWTAKFSGASNIPFLLLQMPQIYLNAQNLLAGNKAALLAVPWMGMFTGLLGNLSL 168

Query: 152 LSYFIKKREKEAIVVQTLGVVSTYVVISQLAVGEAMPMPHFIAISVVVATGLVLNFLNYF 211
           LSYF KKRE EAIVVQTLGV+S YVV +QL++ +AMP+P+F+  S+VVATGLVLNFLNYF
Sbjct: 169 LSYFAKKRENEAIVVQTLGVISLYVVFAQLSMADAMPLPYFVITSIVVATGLVLNFLNYF 228

Query: 212 NMLNAGLWRFWEDVITVGGLTALPQVIWSTFVPTIPNSILPGTIAFVVGVATVVMARMGK 271
             LNAGLWRFWED ITVGGL+ LPQ++WSTFVP +PNSILPG +AFVV V  VVMARMGK
Sbjct: 229 GWLNAGLWRFWEDFITVGGLSVLPQIMWSTFVPYLPNSILPGALAFVVAVVAVVMARMGK 288

Query: 272 LSKQGVKFVRAISGWTATLLFMWMPVSQMWTNFLNPDNIKGLSASSMLLAMIGNGLLIPR 331
           LS+ G+KFV AISGWTATLLFMWMPVSQMWTNFLNPDNIKGLSASSMLLAMIGNGL+IPR
Sbjct: 289 LSEGGIKFVGAISGWTATLLFMWMPVSQMWTNFLNPDNIKGLSASSMLLAMIGNGLMIPR 348

Query: 332 ALFIRDFMWFTGSSWATLFYGYGNLVCLYW 361
           ALFIRD MWFTGS+WA+ FYGYGN+VCLYW
Sbjct: 349 ALFIRDLMWFTGSTWASFFYGYGNIVCLYW 378

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225454603|ref|XP_002265122.1| PREDICTED: maltose excess protein 1, chloroplastic [Vitis vinifera] gi|297737222|emb|CBI26423.3| unnamed protein product [Vitis vinifera]

 Score =  436 bits (1121), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 227/308 (73%), Positives = 265/308 (86%), Gaps = 3/308 (0%)

Query: 57  TLATLHRRLS---PVSAGDSDVPHPFHQESANFRSNKAFEEWNSLTAKFSGAANIPFMLL 113
           +L++LHRRL    PV A DSD+P P ++ S   +S+K+FE+W+SLTAKFS  +N+PF+LL
Sbjct: 51  SLSSLHRRLPRLPPVLALDSDLPGPVYRRSEKLKSSKSFEQWDSLTAKFSAGSNLPFLLL 110

Query: 114 QLPQIILNARNLLAGNKAALLAVPWLGMLTGLLGNLSLLSYFIKKREKEAIVVQTLGVVS 173
           QLPQIILNARNLLAGNK+AL AVPWLGMLTGLLGN+SLLSYF KKRE EA+VVQTLGVVS
Sbjct: 111 QLPQIILNARNLLAGNKSALFAVPWLGMLTGLLGNISLLSYFAKKREAEAVVVQTLGVVS 170

Query: 174 TYVVISQLAVGEAMPMPHFIAISVVVATGLVLNFLNYFNMLNAGLWRFWEDVITVGGLTA 233
            Y VI QLA+  AMP+PHF   S+VVA+GLVLNFL YF +LN+ LW  WED IT+GG++A
Sbjct: 171 IYAVIVQLAMAGAMPLPHFTVTSIVVASGLVLNFLFYFGLLNSTLWNLWEDFITIGGVSA 230

Query: 234 LPQVIWSTFVPTIPNSILPGTIAFVVGVATVVMARMGKLSKQGVKFVRAISGWTATLLFM 293
            PQVIWST VP IPNSILPG IA V+G+  VVMAR GKL ++GVKFVRAISGWTATLLFM
Sbjct: 231 FPQVIWSTLVPFIPNSILPGAIASVIGLVAVVMARTGKLPEKGVKFVRAISGWTATLLFM 290

Query: 294 WMPVSQMWTNFLNPDNIKGLSASSMLLAMIGNGLLIPRALFIRDFMWFTGSSWATLFYGY 353
           WMPVSQM TNFL+P+NIKGLSA SMLLAMIGNGL+IPRALFIRDFMWF GSSWA++FYG+
Sbjct: 291 WMPVSQMMTNFLSPENIKGLSAFSMLLAMIGNGLMIPRALFIRDFMWFLGSSWASIFYGW 350

Query: 354 GNLVCLYW 361
           GNL+CLY+
Sbjct: 351 GNLICLYY 358

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|312282879|dbj|BAJ34305.1| unnamed protein product [Thellungiella halophila]

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 215/303 (70%), Positives = 255/303 (84%)

Query: 58  LATLHRRLSPVSAGDSDVPHPFHQESANFRSNKAFEEWNSLTAKFSGAANIPFMLLQLPQ 117
           + +   RL PV A DSD+PHP HQ S+     K +EEW+S TAKFSGAAN+PF++LQLPQ
Sbjct: 65  IDSTRHRLVPVRAIDSDLPHPIHQGSSGLGKIKEYEEWDSWTAKFSGAANVPFLMLQLPQ 124

Query: 118 IILNARNLLAGNKAALLAVPWLGMLTGLLGNLSLLSYFIKKREKEAIVVQTLGVVSTYVV 177
           IILNA+NLLAGN  AL AVPW+GMLTGLLGNLSLLSYF KKREKEA VVQTLGV+STYVV
Sbjct: 125 IILNAQNLLAGNNTALSAVPWMGMLTGLLGNLSLLSYFAKKREKEAAVVQTLGVISTYVV 184

Query: 178 ISQLAVGEAMPMPHFIAISVVVATGLVLNFLNYFNMLNAGLWRFWEDVITVGGLTALPQV 237
           ++QL + EAMP+ +F+A SVVV  GL+LN L YF  L+  LWR WED ITVGGL+ LPQ+
Sbjct: 185 LAQLTMAEAMPLQYFVATSVVVTIGLILNCLYYFGKLSTTLWRLWEDFITVGGLSVLPQI 244

Query: 238 IWSTFVPTIPNSILPGTIAFVVGVATVVMARMGKLSKQGVKFVRAISGWTATLLFMWMPV 297
           +WSTFVP +PNSILPGT AFV+ VA V+MAR GKLS++GV+F  ++SGWTATL+FMWMP+
Sbjct: 245 MWSTFVPLVPNSILPGTTAFVIAVAAVIMARTGKLSEEGVRFFGSLSGWTATLMFMWMPI 304

Query: 298 SQMWTNFLNPDNIKGLSASSMLLAMIGNGLLIPRALFIRDFMWFTGSSWATLFYGYGNLV 357
           SQMWTNFLNP+NIKGLS  +M+LAM+GNGL+IPRALFIRD MWFTGS W TLFYGYGN++
Sbjct: 305 SQMWTNFLNPENIKGLSPITMVLAMMGNGLMIPRALFIRDLMWFTGSIWGTLFYGYGNIL 364

Query: 358 CLY 360
           CLY
Sbjct: 365 CLY 367

Source: Thellungiella halophila

Species: Eutrema halophilum

Genus: Eutrema

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356543074|ref|XP_003539988.1| PREDICTED: maltose excess protein 1, chloroplastic-like [Glycine max]

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 216/294 (73%), Positives = 255/294 (86%), Gaps = 3/294 (1%)

Query: 68  VSAGDSDVPHPFHQESANFRSNKAFEEWNSLTAKFSGAANIPFMLLQLPQIILNARNLLA 127
           + A DSD  +   QES +   N+++++W+SLTAKFS AAN PF+LLQ+PQIILNARNLL+
Sbjct: 74  IKALDSDAAN---QESVHVGKNESYQQWDSLTAKFSAAANFPFLLLQMPQIILNARNLLS 130

Query: 128 GNKAALLAVPWLGMLTGLLGNLSLLSYFIKKREKEAIVVQTLGVVSTYVVISQLAVGEAM 187
           GNK AL AVPWLGMLT LLGNLSLLSYF KKREKEA+VVQTLGVVSTYVV+ QLA+ E M
Sbjct: 131 GNKLALSAVPWLGMLTSLLGNLSLLSYFAKKREKEAMVVQTLGVVSTYVVLVQLALAETM 190

Query: 188 PMPHFIAISVVVATGLVLNFLNYFNMLNAGLWRFWEDVITVGGLTALPQVIWSTFVPTIP 247
           P+P+F+A SVVV +GLVLNFLNYF +LNAG+WRFWED IT+GGL+ LPQ++WSTFVP +P
Sbjct: 191 PLPYFLATSVVVISGLVLNFLNYFGILNAGIWRFWEDFITIGGLSVLPQIMWSTFVPYVP 250

Query: 248 NSILPGTIAFVVGVATVVMARMGKLSKQGVKFVRAISGWTATLLFMWMPVSQMWTNFLNP 307
           NSILPG  +FV+ V  V +AR GKLS++GVKFV  ISGWTATLLFMWMPVSQMWTN+LNP
Sbjct: 251 NSILPGATSFVIAVLAVTLARTGKLSEKGVKFVGGISGWTATLLFMWMPVSQMWTNYLNP 310

Query: 308 DNIKGLSASSMLLAMIGNGLLIPRALFIRDFMWFTGSSWATLFYGYGNLVCLYW 361
           +N+KGLSA SMLLAM+GNGL++PRAL IRDFMWFTGS WATLFYGYGN+ CLY+
Sbjct: 311 ENMKGLSAFSMLLAMLGNGLMLPRALLIRDFMWFTGSVWATLFYGYGNIACLYY 364

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|6137140|gb|AAF04351.1|AF168391_1 root cap 1 [Arabidopsis thaliana] gi|21536538|gb|AAM60870.1| root cap 1 (RCP1) [Arabidopsis thaliana]

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 223/368 (60%), Positives = 272/368 (73%), Gaps = 9/368 (2%)

Query: 1   MAAKAFVVHFSAAKPSKEPFYRYPDCLSTSQ--SLPLKSLSVNKPAGKLNNVLFISHYTL 58
           M AKA        +    P       + TS+  SLPLK  S+   A   + V  ++ +  
Sbjct: 1   MEAKAIATSLGGDRVLIFPCSPRSSFVFTSRLSSLPLKRASIGG-AVSCSGVNGLTRWNS 59

Query: 59  ATLHRRLSPV------SAGDSDVPHPFHQESANFRSNKAFEEWNSLTAKFSGAANIPFML 112
               RRL PV      S  DSD PH   Q +      K ++EW+S TAKFSG ANIPF++
Sbjct: 60  IVSTRRLVPVRSINSESDSDSDFPHENQQGNPGLGKFKEYQEWDSWTAKFSGGANIPFLM 119

Query: 113 LQLPQIILNARNLLAGNKAALLAVPWLGMLTGLLGNLSLLSYFIKKREKEAIVVQTLGVV 172
           LQLPQIILN +NLLAGN  AL AVPWLGMLTGLLGNLSLLSYF KKREKEA VVQTLGVV
Sbjct: 120 LQLPQIILNTQNLLAGNNTALSAVPWLGMLTGLLGNLSLLSYFAKKREKEAAVVQTLGVV 179

Query: 173 STYVVISQLAVGEAMPMPHFIAISVVVATGLVLNFLNYFNMLNAGLWRFWEDVITVGGLT 232
           ST++V++QL + EAMP+ +F+A S VV  GL++N L YF  L+  +W+ WEDVIT+GGL+
Sbjct: 180 STHIVLAQLTMAEAMPIQYFVATSAVVTIGLIVNCLYYFGKLSKTVWQLWEDVITIGGLS 239

Query: 233 ALPQVIWSTFVPTIPNSILPGTIAFVVGVATVVMARMGKLSKQGVKFVRAISGWTATLLF 292
            LPQ++WSTFVP +PNSILPGT AF + VA ++MAR GKLS++GV+FV ++SGWTATL+F
Sbjct: 240 VLPQIMWSTFVPLVPNSILPGTTAFGIAVAAIIMARTGKLSEKGVRFVGSLSGWTATLMF 299

Query: 293 MWMPVSQMWTNFLNPDNIKGLSASSMLLAMIGNGLLIPRALFIRDFMWFTGSSWATLFYG 352
           MWMPVSQMWTNFLNPDNIKGLS+ +MLL+M+GNGL+IPRALFIRD MW TGS WATLFYG
Sbjct: 300 MWMPVSQMWTNFLNPDNIKGLSSITMLLSMMGNGLMIPRALFIRDLMWLTGSLWATLFYG 359

Query: 353 YGNLVCLY 360
           YGN++CLY
Sbjct: 360 YGNILCLY 367

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18418329|ref|NP_568349.1| Maltose excess protein 1 [Arabidopsis thaliana] gi|41688594|sp|Q9LF50.2|MEX1_ARATH RecName: Full=Maltose excess protein 1, chloroplastic; AltName: Full=Root cap protein 1; Flags: Precursor gi|6137138|gb|AAF04350.1|AF168390_1 root cap 1 [Arabidopsis thaliana] gi|15810297|gb|AAL07036.1| putative root cap protein RCP1 [Arabidopsis thaliana] gi|20466029|gb|AAM20349.1| putative root cap protein RCP1 [Arabidopsis thaliana] gi|332005053|gb|AED92436.1| Maltose excess protein 1 [Arabidopsis thaliana]

 Score =  413 bits (1062), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 216/335 (64%), Positives = 262/335 (78%), Gaps = 7/335 (2%)

Query: 32  SLPLKSLSVNKPAGKLNNVLFISHYTLATLHRRLSPV------SAGDSDVPHPFHQESAN 85
           SLPLK  S+   A   + V  ++ +      RRL PV      S  DSD PH   Q +  
Sbjct: 34  SLPLKRASIGG-AVSCSGVNGLTRWNSIVSTRRLVPVRSINSESDSDSDFPHENQQGNPG 92

Query: 86  FRSNKAFEEWNSLTAKFSGAANIPFMLLQLPQIILNARNLLAGNKAALLAVPWLGMLTGL 145
               K ++EW+S TAKFSG ANIPF++LQLPQIILN +NLLAGN  AL AVPWLGMLTGL
Sbjct: 93  LGKFKEYQEWDSWTAKFSGGANIPFLMLQLPQIILNTQNLLAGNNTALSAVPWLGMLTGL 152

Query: 146 LGNLSLLSYFIKKREKEAIVVQTLGVVSTYVVISQLAVGEAMPMPHFIAISVVVATGLVL 205
           LGNLSLLSYF KKREKEA VVQTLGVVST++V++QL + EAMP+ +F+A S VV  GL++
Sbjct: 153 LGNLSLLSYFAKKREKEAAVVQTLGVVSTHIVLAQLTMAEAMPIQYFVATSAVVTIGLIV 212

Query: 206 NFLNYFNMLNAGLWRFWEDVITVGGLTALPQVIWSTFVPTIPNSILPGTIAFVVGVATVV 265
           N L YF  L+  +W+ WEDVIT+GGL+ LPQ++WSTFVP +PNSILPGT AF + VA ++
Sbjct: 213 NCLYYFGKLSKTVWQLWEDVITIGGLSVLPQIMWSTFVPLVPNSILPGTTAFGIAVAAII 272

Query: 266 MARMGKLSKQGVKFVRAISGWTATLLFMWMPVSQMWTNFLNPDNIKGLSASSMLLAMIGN 325
           MAR GKLS++GV+FV ++SGWTATL+FMWMPVSQMWTNFLNPDNIKGLS+ +MLL+M+GN
Sbjct: 273 MARTGKLSEKGVRFVGSLSGWTATLMFMWMPVSQMWTNFLNPDNIKGLSSITMLLSMMGN 332

Query: 326 GLLIPRALFIRDFMWFTGSSWATLFYGYGNLVCLY 360
           GL+IPRALFIRD MW TGS WATLFYGYGN++CLY
Sbjct: 333 GLMIPRALFIRDLMWLTGSLWATLFYGYGNILCLY 367

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297811901|ref|XP_002873834.1| root cap 1 [Arabidopsis lyrata subsp. lyrata] gi|297319671|gb|EFH50093.1| root cap 1 [Arabidopsis lyrata subsp. lyrata]

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 222/366 (60%), Positives = 271/366 (74%), Gaps = 7/366 (1%)

Query: 1   MAAKAFVVHFSAAKPSKEPFYRYPDCLSTSQ--SLPLKSLSVNKPAGKLNNVLFISHYTL 58
           M AK+        +    P       +STS+   LPLK  S+   A   + V  ++ +  
Sbjct: 1   MEAKSIATSLCGDRVLIFPTSPRSSFVSTSRLSRLPLKRASIGG-AASCSGVNGLTRWNS 59

Query: 59  ATLHRRLSPVSAGDS----DVPHPFHQESANFRSNKAFEEWNSLTAKFSGAANIPFMLLQ 114
               RRL PV A DS    D PH   Q +      K ++EW+S TAKFSG ANIPF++LQ
Sbjct: 60  IVSTRRLVPVRAIDSESGSDFPHENQQGNPCLGKFKEYQEWDSWTAKFSGGANIPFLMLQ 119

Query: 115 LPQIILNARNLLAGNKAALLAVPWLGMLTGLLGNLSLLSYFIKKREKEAIVVQTLGVVST 174
           LPQIILN++NLLAGN  AL AVPWLGMLTGLLGNLSLLSYF KKREKEA VVQTLGVVST
Sbjct: 120 LPQIILNSQNLLAGNNTALSAVPWLGMLTGLLGNLSLLSYFAKKREKEAAVVQTLGVVST 179

Query: 175 YVVISQLAVGEAMPMPHFIAISVVVATGLVLNFLNYFNMLNAGLWRFWEDVITVGGLTAL 234
           ++V++QL + EAMP+ +F+A S VV  GL+LN L YF  L+   W+ WED IT+GGL+ L
Sbjct: 180 HIVLAQLTMAEAMPLQYFVATSAVVTIGLILNCLYYFGKLSKTAWQLWEDFITIGGLSVL 239

Query: 235 PQVIWSTFVPTIPNSILPGTIAFVVGVATVVMARMGKLSKQGVKFVRAISGWTATLLFMW 294
           PQ++WSTFVP +PNSILPGT AF + VA ++MAR GKLS++GV+FV ++SGWTATL+FMW
Sbjct: 240 PQIMWSTFVPLVPNSILPGTTAFGIAVAAIIMARTGKLSEKGVRFVGSLSGWTATLMFMW 299

Query: 295 MPVSQMWTNFLNPDNIKGLSASSMLLAMIGNGLLIPRALFIRDFMWFTGSSWATLFYGYG 354
           MPVSQMWTNFLNPDNIKGLS+ +MLL+M+GNGL+IPRALFIRD MW TGS WATLFYGYG
Sbjct: 300 MPVSQMWTNFLNPDNIKGLSSITMLLSMMGNGLMIPRALFIRDLMWLTGSLWATLFYGYG 359

Query: 355 NLVCLY 360
           N++CLY
Sbjct: 360 NILCLY 365

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357168381|ref|XP_003581619.1| PREDICTED: maltose excess protein 1-like, chloroplastic-like [Brachypodium distachyon]

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 192/286 (67%), Positives = 231/286 (80%)

Query: 75  VPHPFHQESANFRSNKAFEEWNSLTAKFSGAANIPFMLLQLPQIILNARNLLAGNKAALL 134
           +P          +  K +E+W+SLTA+F+G AN+PF+LLQLPQI+LNARNL+AGNK AL 
Sbjct: 75  LPETSSTPELTLKDPKKYEDWDSLTARFAGGANVPFLLLQLPQIVLNARNLIAGNKTALF 134

Query: 135 AVPWLGMLTGLLGNLSLLSYFIKKREKEAIVVQTLGVVSTYVVISQLAVGEAMPMPHFIA 194
           AVPWLGMLTGLLGNLSL+SYF KKRE EA+VVQ+LG +STYVVI+QLA+ E+MP+P FIA
Sbjct: 135 AVPWLGMLTGLLGNLSLMSYFAKKRETEAVVVQSLGCISTYVVIAQLAIAESMPLPQFIA 194

Query: 195 ISVVVATGLVLNFLNYFNMLNAGLWRFWEDVITVGGLTALPQVIWSTFVPTIPNSILPGT 254
            + VVATGL LNFLNY   L  G W  WED +T+GGL  LPQV+WSTFVP IPNS+LPG 
Sbjct: 195 TTAVVATGLTLNFLNYIRWLPEGAWMLWEDFMTIGGLAVLPQVMWSTFVPFIPNSVLPGI 254

Query: 255 IAFVVGVATVVMARMGKLSKQGVKFVRAISGWTATLLFMWMPVSQMWTNFLNPDNIKGLS 314
           I   + +  V MARMGKLS+   KFVRA+SGWTATLLFMWMPV+QMWTN+LNP NI+GLS
Sbjct: 255 IFGSLAIVAVAMARMGKLSEGATKFVRALSGWTATLLFMWMPVAQMWTNYLNPSNIEGLS 314

Query: 315 ASSMLLAMIGNGLLIPRALFIRDFMWFTGSSWATLFYGYGNLVCLY 360
           A +MLLAM+GNGL++PRA+FIRD MWFTG  WA+L  G+GNL C+Y
Sbjct: 315 AFTMLLAMLGNGLMLPRAVFIRDLMWFTGCFWASLLQGWGNLACMY 360

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147833469|emb|CAN59893.1| hypothetical protein VITISV_021270 [Vitis vinifera]

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 211/287 (73%), Positives = 244/287 (85%), Gaps = 3/287 (1%)

Query: 57  TLATLHRRLS---PVSAGDSDVPHPFHQESANFRSNKAFEEWNSLTAKFSGAANIPFMLL 113
           +L++ HRRL    PV A DSD+P P ++ S   +S+K+FE+W+SLTAKFS  +N+PF+LL
Sbjct: 51  SLSSXHRRLPRLPPVLALDSDLPXPVYRRSEKLKSSKSFEQWDSLTAKFSAGSNLPFLLL 110

Query: 114 QLPQIILNARNLLAGNKAALLAVPWLGMLTGLLGNLSLLSYFIKKREKEAIVVQTLGVVS 173
           QLPQIILNARNLLAGNK+AL AVPWLGMLTGLLGN+SLLSYF KKRE EA+VVQTLGVVS
Sbjct: 111 QLPQIILNARNLLAGNKSALFAVPWLGMLTGLLGNISLLSYFAKKREAEAVVVQTLGVVS 170

Query: 174 TYVVISQLAVGEAMPMPHFIAISVVVATGLVLNFLNYFNMLNAGLWRFWEDVITVGGLTA 233
            Y VI QLA+  AMP+PHF   S+VVA+GLVLNFL YF +LN+ LW  WED IT+GG++A
Sbjct: 171 IYAVIVQLAMAGAMPLPHFTVTSIVVASGLVLNFLFYFGLLNSTLWNLWEDFITIGGVSA 230

Query: 234 LPQVIWSTFVPTIPNSILPGTIAFVVGVATVVMARMGKLSKQGVKFVRAISGWTATLLFM 293
            PQVIWST VP IPNSILPG IA V+G+  VVMAR GKL ++GVKFVRAISGWTATLLFM
Sbjct: 231 FPQVIWSTLVPFIPNSILPGAIASVIGLVAVVMARTGKLPEKGVKFVRAISGWTATLLFM 290

Query: 294 WMPVSQMWTNFLNPDNIKGLSASSMLLAMIGNGLLIPRALFIRDFMW 340
           WMPVSQM TNFL+P+NIKGLSA SMLLAMIGNGL+IPRALFIRDFMW
Sbjct: 291 WMPVSQMMTNFLSPENIKGLSAFSMLLAMIGNGLMIPRALFIRDFMW 337

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	361
TAIR|locus:2157492	415	RCP1 "ROOT CAP 1" [Arabidopsis	0.919	0.8	0.566	9.1e-100

TAIR|locus:2157492 RCP1 "ROOT CAP 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 990 (353.6 bits), Expect = 9.1e-100, P = 9.1e-100
 Identities = 192/339 (56%), Positives = 237/339 (69%)

Query:    28 STSQSLPLKSLSVNKPAGKLNNVLFISHYTLATLHRRLSPV------SAGDSDVPHPFHQ 81
             S   SLPLK  S+   A   + V  ++ +      RRL PV      S  DSD PH   Q
Sbjct:    30 SRLSSLPLKRASIGG-AVSCSGVNGLTRWNSIVSTRRLVPVRSINSESDSDSDFPHENQQ 88

Query:    82 ESANFRSNKAFEEWNSLTAKFSGAANIPFMLLQLPQIIXXXXXXXXXXXXXXXXVPWXXX 141
              +      K ++EW+S TAKFSG ANIPF++LQLPQII                VPW   
Sbjct:    89 GNPGLGKFKEYQEWDSWTAKFSGGANIPFLMLQLPQIILNTQNLLAGNNTALSAVPWLGM 148

Query:   142 XXXXXXXXXXXSYFIKKREKEAIVVQTLGVVSTYVVISQLAVGEAMPMPHFIAISVVVAT 201
                        SYF KKREKEA VVQTLGVVST++V++QL + EAMP+ +F+A S VV  
Sbjct:   149 LTGLLGNLSLLSYFAKKREKEAAVVQTLGVVSTHIVLAQLTMAEAMPIQYFVATSAVVTI 208

Query:   202 GLVLNFLNYFNMLNAGLWRFWEDVITVGGLTALPQVIWSTFVPTIPNSILPGTIAFVVGV 261
             GL++N L YF  L+  +W+ WEDVIT+GGL+ LPQ++WSTFVP +PNSILPGT AF + V
Sbjct:   209 GLIVNCLYYFGKLSKTVWQLWEDVITIGGLSVLPQIMWSTFVPLVPNSILPGTTAFGIAV 268

Query:   262 ATVVMARMGKLSKQGVKFVRAISGWTATLLFMWMPVSQMWTNFLNPDNIKGLSASSMLLA 321
             A ++MAR GKLS++GV+FV ++SGWTATL+FMWMPVSQMWTNFLNPDNIKGLS+ +MLL+
Sbjct:   269 AAIIMARTGKLSEKGVRFVGSLSGWTATLMFMWMPVSQMWTNFLNPDNIKGLSSITMLLS 328

Query:   322 MIGNGLLIPRALFIRDFMWFTGSSWATLFYGYGNLVCLY 360
             M+GNGL+IPRALFIRD MW TGS WATLFYGYGN++CLY
Sbjct:   329 MMGNGLMIPRALFIRDLMWLTGSLWATLFYGYGNILCLY 367


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.136   0.430    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      361       331   0.00090  116 3  11 22  0.46    33
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  627 (67 KB)
  Total size of DFA:  237 KB (2126 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:06
  No. of threads or processors used:  24
  Search cpu time:  25.30u 0.07s 25.37t   Elapsed:  00:00:16
  Total cpu time:  25.30u 0.07s 25.37t   Elapsed:  00:00:22
  Start:  Fri May 10 16:01:32 2013   End:  Fri May 10 16:01:54 2013

GO:0009507 "chloroplast" evidence=ISM

GO:0007154 "cell communication" evidence=IMP

GO:0007275 "multicellular organismal development" evidence=IMP

GO:0009629 "response to gravity" evidence=IMP

GO:0009706 "chloroplast inner membrane" evidence=IDA;TAS

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0000023 "maltose metabolic process" evidence=RCA;IMP

GO:0005363 "maltose transmembrane transporter activity" evidence=IDA;TAS

GO:0005983 "starch catabolic process" evidence=IMP;TAS

GO:0009624 "response to nematode" evidence=IEP

GO:0005975 "carbohydrate metabolic process" evidence=IMP

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019760 "glucosinolate metabolic process" evidence=RCA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

GO:0030003 "cellular cation homeostasis" evidence=RCA

GO:0043085 "positive regulation of catalytic activity" evidence=RCA

GO:0070838 "divalent metal ion transport" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q7XTQ5	MEX1_ORYSJ	No assigned EC number	0.6484	0.8559	0.7744	yes	no
Q9LF50	MEX1_ARATH	No assigned EC number	0.6447	0.9085	0.7903	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	361
KOG2913	260	consensus Predicted membrane protein [Function unk	94.54
PF04193	61	PQ-loop: PQ loop repeat	90.38

>KOG2913 consensus Predicted membrane protein [Function unknown]

Probab=94.54  E-value=0.16  Score=48.74  Aligned_cols=200  Identities=23%  Similarity=0.260  Sum_probs=109.7

Q ss_pred             hhhHHhhhhcccchhhhhhhhhHHHHHHHHhhcCCcchhhhhchhHHHhhhhhhhhhHHHHhh-ccccceeEEeeeh-hh
Q 018068           95 WNSLTAKFSGAANIPFMLLQLPQIILNARNLLAGNKAALLAVPWLGMLTGLLGNLSLLSYFIK-KREKEAIVVQTLG-VV  172 (361)
Q Consensus        95 Wds~T~~l~~~a~ipFL~LqlPQIi~Na~nl~~Gn~~AL~av~W~g~ltGLLGNL~LLSYFA~-KrE~~A~~VQ~vG-Vv  172 (361)
                      |+.+---++..+++=-.....|||++|++.=-+.--..++.+.|+.      |...-+.|+-- ..+- ...+|++= .+
T Consensus         5 ~~~~s~~~g~ls~~~w~v~~iPqi~~n~r~Ks~~glS~lfl~~Wli------gdi~nl~g~~l~~~~~-~~~~~~~yy~~   77 (260)
T KOG2913|consen    5 NDTLSTILGILSTVCWCVQLIPQIIENYRRKSTEGLSPLFLLTWLI------GDIFNLVGFFLQPLGS-TLKVQAVYYTL   77 (260)
T ss_pred             HHHHHHHHHHHHHHhhhhhhhhHHHHhhhccccCCCCHHHHHHHHH------ccHHHHHHHHhcccch-hHHHHHHHHHH
Confidence            3444444444455445567789999999999999999999999973      33333333321 1111 12222221 12


Q ss_pred             hhHHHHHHHHhhcCC-C-hhHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhHHHHhhhccCCCCCC
Q 018068          173 STYVVISQLAVGEAM-P-MPHFIAISVVVATGLVLNFLNYFNMLNAGLWRFWEDVITVGGLTALPQVIWSTFVPTIPNSI  250 (361)
Q Consensus       173 St~iVL~QLa~Ag~M-P-~~~F~~ts~~Va~GlvLn~l~yf~~l~~~~W~lWe~~i~igGlavlPQVmwsTf~P~iP~si  250 (361)
                      +..++++|..--+.. | -|.+...                     .      ...-.+|..++++---.-|-|.  .+-
T Consensus        78 ~d~~l~~q~~yy~~~~~~~pll~~~---------------------s------~~s~~~~~~~~~~~~~~~~~~~--~~~  128 (260)
T KOG2913|consen   78 ADSVLFVQCLYYGNIYPREPLLPVP---------------------S------FRSLLGGLEALLILSIKLFSPR--FVK  128 (260)
T ss_pred             HHHHHHHHHHhcchhcccCcccccc---------------------c------hhhhhcchHHHHHHHhhccCcc--hhh
Confidence            223333444332222 1 1111100                     0      0001122334444333333332  233


Q ss_pred             chhH-HHHHHHHHHHHHHHhcCCChhH------HhHhhhcchhhHHHHHHhhcHHHHHhhcCCCCCcccchHHHHHHHHH
Q 018068          251 LPGT-IAFVVGVATVVMARMGKLSKQG------VKFVRAISGWTATLLFMWMPVSQMWTNFLNPDNIKGLSASSMLLAMI  323 (361)
Q Consensus       251 LPg~-i~~~~~~~~Vv~ar~gkL~~k~------~~f~~~lSgWTATLLFMwmPVaQm~tN~lnP~nl~GLS~~T~LLAm~  323 (361)
                      .|-. .++...+.....+...+++.+.      ..-.+...||...+++|+..++|+.-|+. =.+-+|+|.+--+++++
T Consensus       129 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~ilG~l~a~ly~~~rIPQI~~n~~-~~s~eGls~~~F~~~~~  207 (260)
T KOG2913|consen  129 WPVVALGFLAIVFLICGAAYESLLRAVRVNGLEIDSLGAILGSLSALLYLGARIPQIILNHL-RKSTEGLSLLAFAFNSL  207 (260)
T ss_pred             ccchhhhhHHHHHHHHHHHhhccccccccchhhhcchHHHHHHHHHHHHcccccchhhhhhc-cCccchhHHHHHHHHHc
Confidence            3333 3333333333343333333322      34578889999999999999999999986 46789999999999999


Q ss_pred             hcccchhh
Q 018068          324 GNGLLIPR  331 (361)
Q Consensus       324 GNgLMlPR  331 (361)
                      ||---.+-
T Consensus       208 ~n~~y~~s  215 (260)
T KOG2913|consen  208 GNTTYILS  215 (260)
T ss_pred             cccccccc
Confidence            99876654

>PF04193 PQ-loop: PQ loop repeat

Probab=90.38  E-value=0.37  Score=35.10  Aligned_cols=51  Identities=25%  Similarity=0.344  Sum_probs=43.8

Q ss_pred             hcchhhHHHHHHhhcHHHHHhhcCCCCCcccchHHHHHHHHHhcccchhhhh
Q 018068          282 AISGWTATLLFMWMPVSQMWTNFLNPDNIKGLSASSMLLAMIGNGLLIPRAL  333 (361)
Q Consensus       282 ~lSgWTATLLFMwmPVaQm~tN~lnP~nl~GLS~~T~LLAm~GNgLMlPRAL  333 (361)
                      ..-||.++.+....-+.|+..|+-+ .+-+|+|..+.++..+||.+.+==.+
T Consensus         3 ~~~g~i~~~~~~~~~lPQi~~~~k~-ks~~glS~~~~~l~~~g~~~~~~~~~   53 (61)
T PF04193_consen    3 NILGIISIVLWIISFLPQIIKNYKR-KSTGGLSLWFLLLWLIGSILWVLYSI   53 (61)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHc-cccccccHHHHHHHHHHHHHHHHHHH
Confidence            3568999999999999999999999 55599999999999999987664433

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00