Citrus Sinensis ID: 018114

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360
Protein Sequence
MASARAFTLSRITTNTNTNTGASFNPLHLPRAPFSRNHHHHHDVIRWPTRRGLFPASYSATVSCLSSGGGVSNDDFVSTRKSNFDRGFRVIANMLKRIEPLDNSVISKGISESAKDSMKQTISSMLGLLPSDQFSITVRLSKQPLHSLLVSSIITGISLMRNFDISVDGLKRLNFSVEGEVLDKHCEESENEGGEISVEDLEISPQVLGDLSHDALNYIQKLQSDLSNVKEELNSMKHKNMLMESDKTCRNSLLEYLRFLDPYMVKELSQPSSIEVEEIIHQLVQNILQRFFKDDASNNFKGHSIFTNAENLEEVNNENCHSIDTSRDYLAKLLFWCMLLGHHLRGLENRLHLTCAVGLL
Secondary Structure (PSIPRED)
cccccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccHHHHHcccccHHHHHHHHHHHHHHHcccccccccEEEEEcccHHHHHHHHHHHHHHHccccccccccHHHHccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHccHHHHHHccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHcccccccccccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccHccccccccccccccccccccccccccccccccHHHHHHHHccHHHHHHHHccccHHHHHHHHHHHHHHHccccccccEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccHHHHHHHcccccHHHHHHHHHHHHHHHHHccHHHccccccccccccccHHcccccccccccEcccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
masaraftlsrittntntntgasfnplhlprapfsrnhhhhhdvirwptrrglfpasysatvsclssgggvsnddfvstrksnfdRGFRVIANMLKriepldnsviskgiseSAKDSMKQTISSMlgllpsdqfsitvrlskqplhSLLVSSIITGISLmrnfdisvdglkrlnfsvegevldkhceeseneggeisvedleispqvlgdLSHDALNYIQKLQSDLSNVKEELNSMkhknmlmeSDKTCRNSLLEYLRFldpymvkelsqpssiEVEEIIHQLVQNILQRFfkddasnnfkghsiftnaenleevnnenchsiDTSRDYLAKLLFWCMLLGHHLRGLENRLHLTCAVGLL
Flexible Loop (DISEMBL)
masaraftlsrittntntntgasfnPLHLPRAPFSRNHHHHHDVIRWPTRRGLFPASYSATVSCLSSGGGVSNDDFVSTRKSNFDRGFRVIANMlkriepldnsviSKGISESAKDSMKQTISSMLGLLPSDQFSITVRLSKQPLHSLLVSSIITGISLMRNFDISVDGLKRLNFSVEGEVLDKHCeeseneggeisvEDLEISPQVLGDLSHDALNYIQKLQSDLSNVKEELNSMkhknmlmesdKTCRNSLLEYLRFLDPYMVKELSQPSSIEVEEIIHQLVQNILQRFFKDDASNNFKGHSIFTNAENLEEVNNENCHSIDTSRDYLAKLLFWCMLLGHHLRGLENRLHLTCAVGLL
Low Complexity Region (SEG)
MASARAFTLSRITTNTNTNTGASFNPLHLPRAPFSRNHHHHHDVIRWPTRRGLFPASYSATVSCLSSGGGVSNDDFVSTRKSNFDRGFRVIANMLKRIEPLDNSVISKGISESAKDSMKQTISSMLGLLPSDQFSITVRLSKQPLHSLLVSSIITGISLMRNFDISVDGLKRLNFSVEGEVLDKHCEESENEGGEISVEDLEISPQVLGDLSHDALNYIQKLQSDLSNVKEELNSMKHKNMLMESDKTCRNSLLEYLRFLDPYMVKELSQPSSIEVEEIIHQLVQNILQRFFKDDASNNFKGHSIFTnaenleevnnenCHSIDTSRDYLAKLLFWCMLLGHHLRGLENRLHLTCAVGLL
Disordered region (IsUnstruct)
*********************************************RWPTRRGLFPASYSATVSCLSSGGGVSNDDFVSTRKSNFDRGFRVIANMLKRIEPLD***********************LGLLPSDQFSITVRLSKQPLHSLLVSSIITGISLMRNFDISVDGLKRLNFSVEGEVLDK*********************QVLGDLSHDALNYIQK**************************TCRNSLLEYLRFLDPYMVKELSQPSSIEVEEIIHQLVQNILQRFFKDDASNNFKGHSIFTNAENLEEVNNENCHSIDTSRDYLAKLLFWCMLLGHHLRGLENRLHLTCAVG**
Disordered Region (DISOPRED)
******F*LSRIT******************************************************************************ANMLKRIEPLDNSVI*******AKDSMKQTISSMLGLLPSDQFSITVRLSKQPLHSLLVSSIITGISLMRNFDI********************************************DLSHDALNYIQKL*******************************LEYLRFLD************IEVEEIIHQLVQNILQRFFKDD*************************HSIDTSRDYLAKLLFWCMLLGHHLRGLENRLHLTCAVGLL
Disordered Region (DISEMBL)
MASARAFTLSRITTNTNTNTGASFNPLHLPRAPFSRNHHHHHDVIRWPTRRGLFPASYSATVSCLSSGGGVSNDDFVSTRKSNFDRGFRVIANMLKRIEPLDNSVISKGISESAKDSMKQTISSMLGLLPSDQFSITVRLSKQPLHSLLVSSIITGISLMRNFDISVDGLKRLNFSVEGEVLDK***********ISVEDLEISPQVLGDLSHDALNYIQKLQSDLSNVKEELNSMKHKNMLMESDKTCRNSLLEYLRFLDPYMVKELSQPSSIEVEEIIHQLVQNILQRFFKDDASNNFKGHSIFTNAENLEEVNNENCHSIDTSRDYLAKLLFWCMLLGHHLRGLENRLHLTCAVGLL
Disordered Region (DISPRO)
*****AFTLSRITTNTNTNTGASFNPLHLPRAPFSRNHHHHHDVIRWP**************************************GFRVIANMLKRIEPLDNSVISKGISESAKDSMKQTISSMLGLLPSDQFSITVRLSKQPLHSLLVSSIITGISLMRNFDISVDGLKRLNF*********************SVEDLEISPQVLGDLSHDALNYIQKLQSDLSNVKEELNSMKHKNMLMESDKTCRNSLLEYLRFLDPYMVKELSQPSSIEVEEIIHQLVQNILQRFFKDDA*******************NNENCHSIDTSRDYLAKLLFWCMLLGHHLRGLENRLHLTCAVGLL
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASARAFTLSRITTNTNTNTGASFNPLHLPRAPFSRNHHHHHDVIRWPTRRGLFPASYSATVSCLSSGGGVSNDDFVSTRKSNFDRGFRVIANMLKRIEPLDNSVISKGISESAKDSMKQTISSMLGLLPSDQFSITVRLSKQPLHSLLVSSIITGISLMRNFDISVDGLKRLNFSVEGEVLDKHCEESENEGGEISVEDLEISPQVLGDLSHDALNYxxxxxxxxxxxxxxxxxxxxxxxxxxxxKTCRNSLLEYLRFLDPYMVKELSQPSSIEVEEIIHQLVQNILQRFFKDDASNNFKGHSIFTNAENLEEVNNENCHSIDTSRDYLAKLLFWCMLLGHHLRGLENRLHLTCAVGLL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	360
225452642	366	PREDICTED: uncharacterized protein LOC10	0.95	0.934	0.601	1e-110
255552754	352	hypothetical protein RCOM_0852780 [Ricin	0.944	0.965	0.565	1e-101
15242177	355	uncharacterized protein [Arabidopsis tha	0.947	0.960	0.543	9e-93
21536629	355	seed maturation-like protein [Arabidopsi	0.947	0.960	0.540	3e-92
297807513	355	hypothetical protein ARALYDRAFT_488341 [	0.947	0.960	0.535	5e-91
365222904	368	Hop-interacting protein THI043 [Solanum	0.941	0.921	0.545	3e-90
449524296	346	PREDICTED: uncharacterized protein LOC10	0.913	0.950	0.546	5e-85
449459502	368	PREDICTED: uncharacterized protein LOC10	0.908	0.888	0.549	6e-85
356571994	354	PREDICTED: uncharacterized protein LOC10	0.813	0.827	0.554	2e-83
357473529	356	Seed maturation-like protein [Medicago t	0.913	0.924	0.519	8e-83

>gi|225452642|ref|XP_002281888.1| PREDICTED: uncharacterized protein LOC100254161 [Vitis vinifera]

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 229/381 (60%), Positives = 269/381 (70%), Gaps = 39/381 (10%)

Query: 2   ASARAFTLSRITTNTNTNTGASFNPLHLPRAPFSRNHHHHHDVIRWPTRRGLFPASYS-- 59
           A+ARAF LSR+T         S  P H P  PFSR+             R L PAS +  
Sbjct: 3   ATARAFLLSRVTD-------PSLRPHHAPLPPFSRHL----------LARPLLPASAALK 45

Query: 60  ----ATVSCLSSG--GGVSNDDFVSTRKSNFDRGFRVIANMLKRIEPLDNSVISKGISES 113
               A + CL SG  GG  +DDFVSTRKS FDRGF VIANMLKRIEPLDNSVISKG+S+S
Sbjct: 46  RRPPALLCCLVSGVDGGGVSDDFVSTRKSGFDRGFSVIANMLKRIEPLDNSVISKGVSDS 105

Query: 114 AKDSMKQTISSMLGLLPSDQFSITVRLSKQPLHSLLVSSIITG---------ISLMRNFD 164
           A+DSMKQTIS+MLGLLPSDQFS+TVR+SK+PL  LL SSIITG         ISLMRNFD
Sbjct: 106 ARDSMKQTISTMLGLLPSDQFSVTVRVSKRPLDRLLASSIITGYTLWNAEYRISLMRNFD 165

Query: 165 ISVDGLKRLNFSVEGEVLDKHCEESENEGGEI----SVEDLEIS-PQVLGDLSHDALNYI 219
           IS D LKR N S + EVL+   EE++  GGE+    S+ED E S    LGDL  +ALNYI
Sbjct: 166 ISPDSLKRSNCSEQCEVLELQSEETKCGGGEVDVNGSMEDWEPSSAWSLGDLPPEALNYI 225

Query: 220 QKLQSDLSNVKEELNSMKHKNMLMESDKTCRNSLLEYLRFLDPYMVKELSQPSSIEVEEI 279
           QKL+S+LS  K+EL++ K +NM ME ++   N+LLEYLR L+  MV ELS+PSS+EVEEI
Sbjct: 226 QKLESELSTAKKELDAQKQENMQMEYERGNNNNLLEYLRGLESDMVIELSKPSSLEVEEI 285

Query: 280 IHQLVQNILQRFFKDDASNNFKGHSIFTNAENLEEVNNENCHSIDTSRDYLAKLLFWCML 339
           IHQLVQNIL RFFKDD +++F   S      N ++ N E+C +I TSRDYLAKLLFWCML
Sbjct: 286 IHQLVQNILPRFFKDDPTSDFMEDSALGITGNYQDGNGESCETICTSRDYLAKLLFWCML 345

Query: 340 LGHHLRGLENRLHLTCAVGLL 360
           LGHHLRGLENRLHL+C VGLL
Sbjct: 346 LGHHLRGLENRLHLSCVVGLL 366

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255552754|ref|XP_002517420.1| hypothetical protein RCOM_0852780 [Ricinus communis] gi|223543431|gb|EEF44962.1| hypothetical protein RCOM_0852780 [Ricinus communis]

 Score =  373 bits (957), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 208/368 (56%), Positives = 262/368 (71%), Gaps = 28/368 (7%)

Query: 2   ASARAFTLSRITTNTNTNTGASFNPLHLPRAPFSRNHHHHHDVIRWPTRRGLFPASYSAT 61
           ++ARAF LSRI+  +       F+P     + FSR +                  S  ++
Sbjct: 4   STARAFFLSRISDFSPITKPQPFSP-----SAFSRRYSPVSST-----------VSCLSS 47

Query: 62  VSCLSSGGGVSNDDFVSTRKSNFDRGFRVIANMLKRIEPLDNSVISKGISESAKDSMKQT 121
            S  SS GG  +DD VSTRKS+FDRGF VIANMLK+IEPLD  VISKG+S+SAKDSMKQT
Sbjct: 48  SSSSSSSGGGVSDDTVSTRKSSFDRGFCVIANMLKKIEPLDTCVISKGVSDSAKDSMKQT 107

Query: 122 ISSMLGLLPSDQFSITVRLSKQPLHSLLVSSIITG---------ISLMRNFDISVDGLKR 172
           IS+MLGLLPSDQFS+++RLSK PL  LLVSSI+TG         ISLMRNFDISV+  K 
Sbjct: 108 ISTMLGLLPSDQFSVSIRLSKHPLDRLLVSSIMTGYTLWNAEYRISLMRNFDISVENSKE 167

Query: 173 LNFSVEGEVLDKHCEESENEGGEISVEDLEISPQVLGDLSHDALNYIQKLQSDLSNVKEE 232
           L+   + E L    E+ E   GE+ ++DL+ISPQ+ GDLS +ALNYIQ+LQ +LS+ ++E
Sbjct: 168 LDSLEKDEELS---EDREGGVGEVCIQDLQISPQIFGDLSPEALNYIQQLQLELSDAEQE 224

Query: 233 LNSMKHKNMLMESDKTCRNSLLEYLRFLDPYMVKELSQPSSIEVEEIIHQLVQNILQRFF 292
           L++ K + M +E +K  RN LLEYLR LD  MV ELS+PSS+EVE+I+HQLVQN++++FF
Sbjct: 225 LDARKQETMRIECNKGSRNDLLEYLRSLDSEMVSELSRPSSVEVEDIVHQLVQNVVRKFF 284

Query: 293 KDDASNNFKGHSIFTNAENLEEVNNENCHSIDTSRDYLAKLLFWCMLLGHHLRGLENRLH 352
           KDD ++ F G S  +N EN ++  +E C S+ TSRDYLAKLLFWCMLLGHHLRGLENRLH
Sbjct: 285 KDDPTSRFMGCSAISNTENHKDGADEFCDSMGTSRDYLAKLLFWCMLLGHHLRGLENRLH 344

Query: 353 LTCAVGLL 360
           LTC VGLL
Sbjct: 345 LTCVVGLL 352

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15242177|ref|NP_197001.1| uncharacterized protein [Arabidopsis thaliana] gi|9755664|emb|CAC01816.1| seed maturation-like protein [Arabidopsis thaliana] gi|22655278|gb|AAM98229.1| seed maturation-like protein [Arabidopsis thaliana] gi|30984588|gb|AAP42757.1| At4g33110 [Arabidopsis thaliana] gi|332004714|gb|AED92097.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  346 bits (888), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 201/370 (54%), Positives = 248/370 (67%), Gaps = 29/370 (7%)

Query: 2   ASARAF-TLSRITTNTNTNTGASFNPLHLPRAPFSRNHHHHHDVIRWPTRRGLFPASYSA 60
           ASARAF  LSR+T  +          LH P  P S  H   +     P R      S SA
Sbjct: 4   ASARAFFMLSRVTDLSKKKL-----ILHQP-PPSSSPHRLPY----APNR----AVSSSA 49

Query: 61  TVSCLSSGGGVSNDDFVSTRKSNFDRGFRVIANMLKRIEPLDNSVISKGISESAKDSMKQ 120
            +SCLS GG  S+D +VSTR+S  DRGF VIAN++ RI+PLD SVISKG+S+SAKDSMKQ
Sbjct: 50  VISCLSGGGVSSDDSYVSTRRSKLDRGFAVIANLVNRIQPLDTSVISKGLSDSAKDSMKQ 109

Query: 121 TISSMLGLLPSDQFSITVRLSKQPLHSLLVSSIITG---------ISLMRNFDISVDGLK 171
           TISSMLGLLPSDQFS++V +S+QPL+ LL+SSIITG         +SL RNFDI +D  K
Sbjct: 110 TISSMLGLLPSDQFSVSVTISEQPLYRLLISSIITGYTLWNAEYRVSLRRNFDIPIDPRK 169

Query: 172 RLNFSVEGEVLDKHCEESENEGGEISVEDLE-ISPQVLGDLSHDALNYIQKLQSDLSNVK 230
                   + +    E+  +E     VE+ E +SPQV GDLS +AL+YIQ LQS+LS++K
Sbjct: 170 EEEDQSSKDNVRFGSEKGMSEDLGNCVEEFERLSPQVFGDLSPEALSYIQLLQSELSSMK 229

Query: 231 EELNSMKHKNMLMESDKTCRNSLLEYLRFLDPYMVKELSQPSSIEVEEIIHQLVQNILQR 290
           EEL+S K K + +E +K  RN LL+YLR LDP MV ELSQ SS EVEEI++QLVQN+L+R
Sbjct: 230 EELDSQKKKALRIECEKGNRNDLLDYLRSLDPEMVTELSQLSSPEVEEIVNQLVQNVLER 289

Query: 291 FFKDDASNNFKGHSIFTNAENLEEVNNENCHSIDTSRDYLAKLLFWCMLLGHHLRGLENR 350
            F+D  ++NF  +      E      +     +DTSRDYLAKLLFWCMLLGHHLRGLENR
Sbjct: 290 LFEDQTTSNFMQNPGIRTTEG----GDGTGRKVDTSRDYLAKLLFWCMLLGHHLRGLENR 345

Query: 351 LHLTCAVGLL 360
           LHL+C VGLL
Sbjct: 346 LHLSCVVGLL 355

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21536629|gb|AAM60961.1| seed maturation-like protein [Arabidopsis thaliana]

 Score =  345 bits (884), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 200/370 (54%), Positives = 248/370 (67%), Gaps = 29/370 (7%)

Query: 2   ASARAF-TLSRITTNTNTNTGASFNPLHLPRAPFSRNHHHHHDVIRWPTRRGLFPASYSA 60
           ASARAF  LSR+T  +          LH P  P S  H   +     P R      S SA
Sbjct: 4   ASARAFFMLSRVTDLSKKKL-----ILHQP-PPSSSPHRLPY----APNR----AVSSSA 49

Query: 61  TVSCLSSGGGVSNDDFVSTRKSNFDRGFRVIANMLKRIEPLDNSVISKGISESAKDSMKQ 120
            +SCLS GG  S+D +VSTR+S  DRGF VIAN++ RI+PLD SVISKG+S+SAKDSMKQ
Sbjct: 50  VISCLSGGGVSSDDSYVSTRRSKLDRGFAVIANLVNRIQPLDTSVISKGLSDSAKDSMKQ 109

Query: 121 TISSMLGLLPSDQFSITVRLSKQPLHSLLVSSIITG---------ISLMRNFDISVDGLK 171
           TISSMLGLLPSDQFS++V +S+QPL+ LL+SSIITG         +SL RNFDI +D  K
Sbjct: 110 TISSMLGLLPSDQFSVSVTISEQPLYRLLISSIITGYTLWNAEYRVSLRRNFDIPIDPRK 169

Query: 172 RLNFSVEGEVLDKHCEESENEGGEISVEDLE-ISPQVLGDLSHDALNYIQKLQSDLSNVK 230
                   + +    E+  +E     VE+ E +SPQV GDLS +AL+YIQ LQS+LS++K
Sbjct: 170 EEEDQSSKDNVRFGSEKGMSEDLGNCVEEFERLSPQVFGDLSPEALSYIQLLQSELSSMK 229

Query: 231 EELNSMKHKNMLMESDKTCRNSLLEYLRFLDPYMVKELSQPSSIEVEEIIHQLVQNILQR 290
           EEL+S K K + +E +K  RN LL+YLR LDP MV ELSQ SS EVEEI++QLVQN+L+R
Sbjct: 230 EELDSQKKKALRIECEKGNRNDLLDYLRSLDPEMVTELSQLSSPEVEEIVNQLVQNVLER 289

Query: 291 FFKDDASNNFKGHSIFTNAENLEEVNNENCHSIDTSRDYLAKLLFWCMLLGHHLRGLENR 350
            F+D  ++NF  +      +      +     +DTSRDYLAKLLFWCMLLGHHLRGLENR
Sbjct: 290 LFEDQTTSNFMQNPGIRTTDG----GDGTGRKVDTSRDYLAKLLFWCMLLGHHLRGLENR 345

Query: 351 LHLTCAVGLL 360
           LHL+C VGLL
Sbjct: 346 LHLSCVVGLL 355

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297807513|ref|XP_002871640.1| hypothetical protein ARALYDRAFT_488341 [Arabidopsis lyrata subsp. lyrata] gi|297317477|gb|EFH47899.1| hypothetical protein ARALYDRAFT_488341 [Arabidopsis lyrata subsp. lyrata]

 Score =  340 bits (873), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 198/370 (53%), Positives = 249/370 (67%), Gaps = 29/370 (7%)

Query: 2   ASARAF-TLSRITTNTNTNTGASFNPLHLPRAPFSRNHHHHHDVIRWPTRRGLFPASYSA 60
           ASARAF  LSR+T         S   L L + P S + H    +   P R      S SA
Sbjct: 4   ASARAFFLLSRVTD-------LSKKKLILHQPPPSSSPHR---LPCAPNR----AVSSSA 49

Query: 61  TVSCLSSGGGVSNDDFVSTRKSNFDRGFRVIANMLKRIEPLDNSVISKGISESAKDSMKQ 120
            +SCLS GG  S+D +VSTR+S  DRGF VIAN++ RI+PLD SVISKG+S+SAKDSMKQ
Sbjct: 50  VISCLSGGGVSSDDSYVSTRRSKLDRGFAVIANLVNRIQPLDTSVISKGLSDSAKDSMKQ 109

Query: 121 TISSMLGLLPSDQFSITVRLSKQPLHSLLVSSIITG---------ISLMRNFDISVDGLK 171
           TISSMLGLLPSDQFS++V +S++PL+ LL+SSIITG         +SL RNFDI +D  K
Sbjct: 110 TISSMLGLLPSDQFSVSVTISEKPLYRLLISSIITGYTLWNAEYRVSLRRNFDIPIDPRK 169

Query: 172 RLNFSVEGEVLDKHCEESENEGGEISVEDLE-ISPQVLGDLSHDALNYIQKLQSDLSNVK 230
                   + +    E++ +E     VE+ E +SPQV GDLS +AL+YIQ LQS+LS++K
Sbjct: 170 EEEDQSSKDNVRFGSEKAVSEDLGNCVEEFERLSPQVFGDLSPEALSYIQHLQSELSSMK 229

Query: 231 EELNSMKHKNMLMESDKTCRNSLLEYLRFLDPYMVKELSQPSSIEVEEIIHQLVQNILQR 290
           EEL+S K K + +E +K  +N LL+YLR LDP MV ELSQ SS EVEEI++QLVQN+L+R
Sbjct: 230 EELDSQKKKALQIECEKGNKNDLLDYLRSLDPEMVTELSQLSSPEVEEIVNQLVQNVLER 289

Query: 291 FFKDDASNNFKGHSIFTNAENLEEVNNENCHSIDTSRDYLAKLLFWCMLLGHHLRGLENR 350
            F+D  ++NF  +      E      +     +DTSRDYLAKLLFWCMLLGHHLRGLENR
Sbjct: 290 LFEDQTTSNFMQNPGIRTTEG----GDGTGRKVDTSRDYLAKLLFWCMLLGHHLRGLENR 345

Query: 351 LHLTCAVGLL 360
           LHL+C  GLL
Sbjct: 346 LHLSCVAGLL 355

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|365222904|gb|AEW69804.1| Hop-interacting protein THI043 [Solanum lycopersicum]

 Score =  338 bits (867), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 210/385 (54%), Positives = 257/385 (66%), Gaps = 46/385 (11%)

Query: 2   ASARAFTLSRITTNTNTNTGASFNPLHLPRAPFSRNHHHHHDVIRWPTRRGLFPASYSAT 61
           ASAR    SR+    + +     +P HLP +PF+     HH +IR      L P+  ++T
Sbjct: 4   ASARVLLASRLA---DLSLKPHQHPPHLP-SPFT-----HHLLIR-----PLLPSLSAST 49

Query: 62  -----VSCLSSG--GGVSNDDFVSTRKSNFDRGFRVIANMLKRIEPLDNSVISKGISESA 114
                V+CL SG  GG  +DDFVSTRKS F   F VIANMLKRIEPLD SVISKG+S+SA
Sbjct: 50  RRRTSVNCLISGVDGGGVSDDFVSTRKSGFGSEFSVIANMLKRIEPLDTSVISKGVSDSA 109

Query: 115 KDSMKQTISSMLGLLPSDQFSITVRLSKQPLHSLLVSSIITG---------ISLMRNFDI 165
           KDSMKQTIS+MLGLLPSDQFSITVR SK  L  L+VSSIITG         ISLMRNFDI
Sbjct: 110 KDSMKQTISTMLGLLPSDQFSITVRFSKHALDRLIVSSIITGYTLWNAEYRISLMRNFDI 169

Query: 166 SVDGLKRLNFSVEGEVLDKHCEESEN-EGGEISV---------EDLEISPQVLGDLSHDA 215
             D LK  N S E +V      +SE  EGGE  V         E ++I  Q LG+LS +A
Sbjct: 170 PSDNLKGFN-STEEDV--NSGSKSEGIEGGERGVGVNMSSAVSEKMDI--QALGNLSPEA 224

Query: 216 LNYIQKLQSDLSNVKEELNSMKHKNMLMESDKTCRNSLLEYLRFLDPYMVKELSQPSSIE 275
           L Y+Q+L+ +LS++K+EL+S + +N+ ME      N LLEYLR L+  MV ELS+PSS E
Sbjct: 225 LKYVQQLEEELSSIKQELHSQQQENLQMEYINESNNDLLEYLRSLESDMVTELSRPSSFE 284

Query: 276 VEEIIHQLVQNILQRFFKDDASNNFKGHSIFTNAENLEEVNNENCHSIDTSRDYLAKLLF 335
           VEEII +L QNILQ FFK+D  N  +  + F+ A++ +  ++E C +I TSRDYLAKLLF
Sbjct: 285 VEEIIKELTQNILQIFFKEDDVNKEEDPN-FSGAKDYQSSDSELCDAIGTSRDYLAKLLF 343

Query: 336 WCMLLGHHLRGLENRLHLTCAVGLL 360
           WCMLLGHHLRGLENRLHL+C VGLL
Sbjct: 344 WCMLLGHHLRGLENRLHLSCVVGLL 368

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449524296|ref|XP_004169159.1| PREDICTED: uncharacterized protein LOC101224200, partial [Cucumis sativus]

 Score =  320 bits (821), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 195/357 (54%), Positives = 238/357 (66%), Gaps = 28/357 (7%)

Query: 2   ASARAFTLSRITT-NTNTNTGASFNPLHLPRAPFSRNHHHHHDVIRWPTRRGLFPA---S 57
            SARAF LSR+T  +          P   P   FS +H           +R  FP+   S
Sbjct: 3   VSARAFFLSRLTDFSIKPRLPPQPPPPPPPLPSFSYSH--------LTLQRRRFPSASTS 54

Query: 58  YSATVSCLSSG--GGVSNDDFVSTRKSNFDRGFRVIANMLKRIEPLDNSVISKGISESAK 115
            + TVSCL SG  GG  +DDFVSTRK  FDRGF VIANMLKRIEPL  S ISKG+S+ AK
Sbjct: 55  GATTVSCLVSGVDGGGVSDDFVSTRKLKFDRGFSVIANMLKRIEPLHTSDISKGVSDVAK 114

Query: 116 DSMKQTISSMLGLLPSDQFSITVRLSKQPLHSLLVSSIITG---------ISLMRNFDIS 166
           DSMKQTISSMLGLLPSDQFS+TVR+SK PLH+LL SSIITG         +SLMRNFDIS
Sbjct: 115 DSMKQTISSMLGLLPSDQFSVTVRVSKSPLHNLLSSSIITGYTLWNAEYRLSLMRNFDIS 174

Query: 167 VDGLKRLNFSVEGEVLDKHCEESENEGGEISVEDLEISPQVLGDLSHDALNYIQKLQSDL 226
            D L  L+ S   EV D    E    G + ++EDL+  P++L DL  +AL YIQ+LQ++L
Sbjct: 175 PDNLTGLDRSKPLEVSDI---EENRVGVDSNMEDLDTRPRLLSDLPPEALKYIQQLQTEL 231

Query: 227 SNVKEELNSMKHKNMLMESDKTCRNSLLEYLRFLDPYMVKELSQPSSIEVEEIIHQLVQN 286
           SN+K+ELN+ K +N+ +E  +  RN LLEYLR LD  MV EL +PS+ EVEEIIH+LV N
Sbjct: 232 SNLKDELNAQKQENIHIEHGRGNRNDLLEYLRSLDSDMVTELCKPSTSEVEEIIHELVGN 291

Query: 287 ILQRFFKDDASNNFKGHSIFTNAENLEEVNNENCHSIDTSRDYLAKLLFWCMLLGHH 343
           ILQRFFKDDAS++F   S   + E L +  +E C ++ TSRDYLAKLLFW   +G+H
Sbjct: 292 ILQRFFKDDASSSFIEDSSVADLEKLADAGDEFCDTVGTSRDYLAKLLFW--FVGNH 346

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449459502|ref|XP_004147485.1| PREDICTED: uncharacterized protein LOC101208572 [Cucumis sativus]

 Score =  320 bits (821), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 194/353 (54%), Positives = 235/353 (66%), Gaps = 26/353 (7%)

Query: 2   ASARAFTLSRITT-NTNTNTGASFNPLHLPRAPFSRNHHHHHDVIRWPTRRGLFPA---S 57
            SARAF LSR+T  +          P   P   FS +H           +R  FP+   S
Sbjct: 3   VSARAFFLSRLTDFSIKPRLPPQPPPPPPPLPSFSYSHL--------TLQRRRFPSASTS 54

Query: 58  YSATVSCLSSG--GGVSNDDFVSTRKSNFDRGFRVIANMLKRIEPLDNSVISKGISESAK 115
            + TVSCL SG  GG  +DDFVSTRK  FDRGF VIANMLKRIEPL  S ISKG+S+ AK
Sbjct: 55  GATTVSCLVSGVDGGGVSDDFVSTRKLKFDRGFSVIANMLKRIEPLHTSDISKGVSDVAK 114

Query: 116 DSMKQTISSMLGLLPSDQFSITVRLSKQPLHSLLVSSIITG---------ISLMRNFDIS 166
           DSMKQTISSMLGLLPSDQFS+TVR+SK PLH+LL SSIITG         +SLMRNFDIS
Sbjct: 115 DSMKQTISSMLGLLPSDQFSVTVRVSKSPLHNLLSSSIITGYTLWNAEYRLSLMRNFDIS 174

Query: 167 VDGLKRLNFSVEGEVLDKHCEESENEGGEISVEDLEISPQVLGDLSHDALNYIQKLQSDL 226
            D L  L+ S   EV D    E    G + ++EDL+  P++L DL  +AL YIQ+LQ++L
Sbjct: 175 PDNLTGLDRSKPLEVSDI---EENRVGVDSNMEDLDTRPRLLSDLPPEALKYIQQLQTEL 231

Query: 227 SNVKEELNSMKHKNMLMESDKTCRNSLLEYLRFLDPYMVKELSQPSSIEVEEIIHQLVQN 286
           SN+K+ELN+ K +N+ +E  +  RN LLEYLR LD  MV EL +PS+ EVEEIIH+LV N
Sbjct: 232 SNLKDELNAQKQENIHIEHGRGNRNDLLEYLRSLDSDMVTELCKPSTSEVEEIIHELVGN 291

Query: 287 ILQRFFKDDASNNFKGHSIFTNAENLEEVNNENCHSIDTSRDYLAKLLFWCML 339
           ILQRFFKDDAS++F   S   + E L +  +E C ++ TSRDYLAKLLFW  L
Sbjct: 292 ILQRFFKDDASSSFIEDSSVADLEKLADAGDEFCDTVGTSRDYLAKLLFWWAL 344

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356571994|ref|XP_003554155.1| PREDICTED: uncharacterized protein LOC100778484 [Glycine max]

 Score =  315 bits (808), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 182/328 (55%), Positives = 222/328 (67%), Gaps = 35/328 (10%)

Query: 50  RRGLFPASYSATVSCLSSGGGVSNDDFVSTRKSNFDRGFRVIANMLKRIEPLDNSVISKG 109
           R G  P       SCLS       DD VSTR  NFDRGF VIA ML+RIEPLDNS ISKG
Sbjct: 45  RGGFLP-------SCLS-------DDAVSTR--NFDRGFTVIAAMLRRIEPLDNSAISKG 88

Query: 110 ISESAKDSMKQTISSMLGLLPSDQFSITVRLSKQPLHSLLVSSIITG---------ISLM 160
           +S +A+DSMKQTIS+MLGLLPSD F++T+ +SK PLH LL SSI+TG         +SL 
Sbjct: 89  VSPAARDSMKQTISTMLGLLPSDHFAVTITVSKHPLHRLLFSSIVTGYTLWNAEYRMSLT 148

Query: 161 RNFDISVDGLKRLNFSVEGEVLDKHCEESENEGGEISVE---DLEISP-----QVLGDLS 212
           RN DIS    +  +     EVL+   ++     G+  +E   DLE        +  GDL 
Sbjct: 149 RNLDISGSRDEGSDCETRSEVLE--VKDGAKTVGDEKIEVVNDLESCSCSGNLKEFGDLP 206

Query: 213 HDALNYIQKLQSDLSNVKEELNSMKHKNMLMESDKTCRNSLLEYLRFLDPYMVKELSQPS 272
             AL+YIQ+LQS+L++V EELN+ K + M +E DK   N+LLEYLR LDP MV ELS+PS
Sbjct: 207 PQALSYIQQLQSELTSVTEELNAQKQEMMQLEYDKGKWNNLLEYLRSLDPNMVTELSRPS 266

Query: 273 SIEVEEIIHQLVQNILQRFFKDDASNNFKGHSIFTNAENLEEVNNENCHSIDTSRDYLAK 332
           S+EVE+IIHQLVQNIL+RFF DD S++F   S+  N +N     +E  ++I TSRDYLAK
Sbjct: 267 SLEVEDIIHQLVQNILRRFFVDDGSSSFMEQSVEGNVDNRAGSGDELSNTIATSRDYLAK 326

Query: 333 LLFWCMLLGHHLRGLENRLHLTCAVGLL 360
           LLFWCMLLGHHLRGLENRLHL+C VGLL
Sbjct: 327 LLFWCMLLGHHLRGLENRLHLSCVVGLL 354

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357473529|ref|XP_003607049.1| Seed maturation-like protein [Medicago truncatula] gi|357496193|ref|XP_003618385.1| Seed maturation protein PM23 [Medicago truncatula] gi|355493400|gb|AES74603.1| Seed maturation protein PM23 [Medicago truncatula] gi|355508104|gb|AES89246.1| Seed maturation-like protein [Medicago truncatula] gi|388512041|gb|AFK44082.1| unknown [Medicago truncatula]

 Score =  313 bits (802), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 197/379 (51%), Positives = 241/379 (63%), Gaps = 50/379 (13%)

Query: 3   SARAFTLSRITTNTNTNTGASFNPLH--LPRAPFSRNHHHHHDVIRWPTRRGLFPASYSA 60
           S++ F LSRIT N       S   LH  LP   F R         R P RR    A+   
Sbjct: 7   SSQPFILSRITNN------PSHPSLHHPLPSLFFLR---------RPPHRRPFLFAT--- 48

Query: 61  TVSCLSSGGGVSNDDFVSTRKSNFDRGFRVIANMLKRIEPLDNSVISKGISESAKDSMKQ 120
             SC      V  DD VSTRKS F+RGF VI+ ML+RI+PLDNSVISKG+SE++KDSMKQ
Sbjct: 49  --SC----HHVDGDDVVSTRKSTFNRGFTVISKMLRRIKPLDNSVISKGVSEASKDSMKQ 102

Query: 121 TISSMLGLLPSDQFSITVRLSKQPLHSLLVSSIITG---------ISLMRNFDISVDGLK 171
           TIS+MLGLLPSD F +TV    QPLH LLVSSIITG         +SL RN ++S    +
Sbjct: 103 TISTMLGLLPSDHFDVTVSFEIQPLHRLLVSSIITGYTLWNAEYRMSLTRNLEMS-HADQ 161

Query: 172 RLNFSVEGEVLDKHCEESENEGGEISVEDLEIS----------PQVLGDLSHDALNYIQK 221
             +     E L+    E E+   E  V DL ++            V GDL   AL YIQ+
Sbjct: 162 GADCETPLESLELKGGEEEHGETEKVVSDLGLANSEICSSSTGAGVFGDLPPQALKYIQQ 221

Query: 222 LQSDLSNVKEELNSMKHKNMLMESDKTCRNSLLEYLRFLDPYMVKELSQPSSIEVEEIIH 281
           LQS+L+N+KEELN+ K + M +E D+  RN+LLEYLR  DP MV E+S+PSS EVE+IIH
Sbjct: 222 LQSELTNMKEELNAQKQEMMQLEHDRGIRNNLLEYLRSFDPDMVTEMSRPSSEEVEDIIH 281

Query: 282 QLVQNILQRFFKDDASNNFKGHSIFTNAENLEEVNNENCHSIDTSRDYLAKLLFWCMLLG 341
           QLVQNIL+RF  D+AS+NF   S+  N ++ +E +++    I TSRDYLAKLLFWCMLLG
Sbjct: 282 QLVQNILRRFLVDEASSNFMEQSVEGNIDDGDEFSDK----IATSRDYLAKLLFWCMLLG 337

Query: 342 HHLRGLENRLHLTCAVGLL 360
           HHLRGLENRLHL+C VGLL
Sbjct: 338 HHLRGLENRLHLSCVVGLL 356

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	360
TAIR|locus:2147875	355	AT5G14970 "AT5G14970" [Arabido	0.941	0.954	0.548	2.4e-85
TAIR|locus:2060495	386	AT2G14910 [Arabidopsis thalian	0.602	0.562	0.372	3.3e-31
TAIR|locus:2026669	341	AT1G63610 "AT1G63610" [Arabido	0.525	0.554	0.253	7.3e-12

TAIR|locus:2147875 AT5G14970 "AT5G14970" [Arabidopsis thaliana (taxid:3702)]

 Score = 854 (305.7 bits), Expect = 2.4e-85, P = 2.4e-85
 Identities = 204/372 (54%), Positives = 253/372 (68%)

Query:     2 ASARAF-TLSRITTNTNTNTGASFNPLHLPRAPFSRNHHHHHDVIRWPTRRGLFPASYSA 60
             ASARAF  LSR+T  +          LH P  P S + H     + +   R +   S SA
Sbjct:     4 ASARAFFMLSRVTDLSKKKL-----ILHQP--PPSSSPHR----LPYAPNRAV---SSSA 49

Query:    61 TVSCLSSGGGVSNDD-FVSTRKSNFDRGFRVIANMLKRIEPLDNSVISKGISESAKDSMK 119
              +SCLS GGGVS+DD +VSTR+S  DRGF VIAN++ RI+PLD SVISKG+S+SAKDSMK
Sbjct:    50 VISCLS-GGGVSSDDSYVSTRRSKLDRGFAVIANLVNRIQPLDTSVISKGLSDSAKDSMK 108

Query:   120 QTISSMLGLLPSDQFSITVRLSKQPLHSLLVSSIITG---------ISLMRNFDISVDGL 170
             QTISSMLGLLPSDQFS++V +S+QPL+ LL+SSIITG         +SL RNFDI +D  
Sbjct:   109 QTISSMLGLLPSDQFSVSVTISEQPLYRLLISSIITGYTLWNAEYRVSLRRNFDIPIDPR 168

Query:   171 KRLNFSVEGEVLDKHCEESENEGGEISVEDLE-ISPQVLGDLSHDALNYIQKLQSDLSNV 229
             K        + +    E+  +E     VE+ E +SPQV GDLS +AL+YIQ LQS+LS++
Sbjct:   169 KEEEDQSSKDNVRFGSEKGMSEDLGNCVEEFERLSPQVFGDLSPEALSYIQLLQSELSSM 228

Query:   230 KEELNSMKHKNMLMESDKTCRNSLLEYLRFLDPYMVKELSQPSSIEVEEIIHQLVQNILQ 289
             KEEL+S K K + +E +K  RN LL+YLR LDP MV ELSQ SS EVEEI++QLVQN+L+
Sbjct:   229 KEELDSQKKKALRIECEKGNRNDLLDYLRSLDPEMVTELSQLSSPEVEEIVNQLVQNVLE 288

Query:   290 RFFKDDASNNF-KGHSIFTXXXXXXXXXXXXCHSIDTSRDYLAKLLFWCMLLGHHLRGLE 348
             R F+D  ++NF +   I T               +DTSRDYLAKLLFWCMLLGHHLRGLE
Sbjct:   289 RLFEDQTTSNFMQNPGIRTTEGGDGTG-----RKVDTSRDYLAKLLFWCMLLGHHLRGLE 343

Query:   349 NRLHLTCAVGLL 360
             NRLHL+C VGLL
Sbjct:   344 NRLHLSCVVGLL 355

GO:0000023 "maltose metabolic process" evidence=RCA

GO:0015996 "chlorophyll catabolic process" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

TAIR|locus:2060495 AT2G14910 [Arabidopsis thaliana (taxid:3702)]

 Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
 Identities = 88/236 (37%), Positives = 136/236 (57%)

Query:    70 GVSNDDFVSTRKSNFDRGFRVIANMLKRIEPLDNSVISKGISESAKDSMKQTISSMLGLL 129
             G S DDF     S   +   V++++++ IEPLD S+I K +  +  D+MK+TIS MLGLL
Sbjct:    61 GFSLDDFTLHSDSRSPKKC-VLSDLIQEIEPLDVSLIQKDVPVTTLDAMKRTISGMLGLL 119

Query:   130 PSDQFSITVRLSKQPLHSLLVSSIITGISLM---------RNFDISVDGL-----KRLNF 175
             PSD+F + +    +PL  LLVSS++TG +L          +N D+S  GL     +   +
Sbjct:   120 PSDRFQVHIESLWEPLSKLLVSSMMTGYTLRNAEYRLFLEKNLDMSGGGLDSHASENTEY 179

Query:   176 SVEGEVLDKHCEESENEGGEISVEDLEISPQVLGDLSHDALNYIQKLQSDLSNVKEELNS 235
              +EG   D+    S+ +    ++ +  I  + LG +S +A  YI +LQS LS+VK+EL  
Sbjct:   180 DMEGTFPDEDHVSSKRDSRTQNLSET-IDEEGLGRVSSEAQEYILRLQSQLSSVKKELQE 238

Query:   236 MKHKNMLMESDKTC---RNSLLEYLRFLDPYMVKELSQPSSIEVEEIIHQLVQNIL 288
             M+ KN  ++  +     +N LL+YLR L P  V ELS+P++ EV+E IH +V  +L
Sbjct:   239 MRRKNAALQMQQFVGEEKNDLLDYLRSLQPEKVAELSEPAAPEVKETIHSVVHGLL 294

GO:0009507 "chloroplast" evidence=ISM

GO:0015996 "chlorophyll catabolic process" evidence=RCA

TAIR|locus:2026669 AT1G63610 "AT1G63610" [Arabidopsis thaliana (taxid:3702)]

 Score = 152 (58.6 bits), Expect = 7.3e-12, Sum P(2) = 7.3e-12
 Identities = 51/201 (25%), Positives = 99/201 (49%)

Query:    90 VIANMLKRIEPLDNSVISKGISESAKDSMKQTISSMLGLLPSDQFSITVRLSKQPLHSLL 149
             ++   ++ ++P    +  K   +   ++M+QT+++M+G LP   F++TV    + L  L+
Sbjct:    89 ILLEYVQNVKPEFMEMFVKRAPKHVVEAMRQTVTNMIGTLPPQFFAVTVTSVAENLAQLM 148

Query:   150 VSSIITGISLMRNFDISVDGLKRLNFSVEGEVLD-KHCEESENEGGEISVEDLEIS-PQV 207
             +S ++TG  + RN    ++  + L      E  D K  +E    G + +V    I    V
Sbjct:   149 MSVLMTGY-MFRNAQYRLELQQSLEQVALPEPRDQKGGDEDYAPGTQKNVSGEVIRWNNV 207

Query:   208 LGDLSHDALNYIQKLQSDLSNVKEELNSMKHKNMLMESDKTCRNSLLEYLRFLDPYMVKE 267
              G    DA  YI+ L++++    EELN    +    +     +N +LEYL+ L+P  +KE
Sbjct:   208 SGPEKIDAKKYIELLEAEI----EELNRQVGRKSANQ-----QNEILEYLKSLEPQNLKE 258

Query:   268 LSQPSSIEVEEIIHQLVQNIL 288
             L+  +  +V   ++  V+ +L
Sbjct:   259 LTSTAGEDVAVAMNTFVKRLL 279

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0010207 "photosystem II assembly" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	360
pfam05542	85	pfam05542, DUF760, Protein of unknown function (DU	1e-14
pfam05542	85	pfam05542, DUF760, Protein of unknown function (DU	3e-12

>gnl|CDD|203271 pfam05542, DUF760, Protein of unknown function (DUF760)

 Score = 68.0 bits (167), Expect = 1e-14
 Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 23/108 (21%)

Query: 251 NSLLEYLRFLDPYMVKELSQPSSIEVEEIIHQLVQNILQRFFKDDASNNFKGHSIFTNAE 310
           N LL+Y++ L P  +  L+  +S EV E + + V  +L     D                
Sbjct: 1   NVLLQYIQSLPPETLARLADSASPEVLEAMRRNVSGLLGSLPSDHFEV------------ 48

Query: 311 NLEEVNNENCHSIDTSRDYLAKLLFWCMLLGHHLRGLENRLHLTCAVG 358
                      +I TSR+ LA+LL   M+ G+ LR  E RL L  ++G
Sbjct: 49  -----------TIQTSRENLAQLLASSMMTGYFLRNAEQRLELERSLG 85

This family contains several uncharacterized plant proteins. Length = 85

>gnl|CDD|203271 pfam05542, DUF760, Protein of unknown function (DUF760)

 Score = 61.4 bits (150), Expect = 3e-12
 Identities = 20/64 (31%), Positives = 39/64 (60%)

Query: 93  NMLKRIEPLDNSVISKGISESAKDSMKQTISSMLGLLPSDQFSITVRLSKQPLHSLLVSS 152
             ++ + P   + ++   S    ++M++ +S +LG LPSD F +T++ S++ L  LL SS
Sbjct: 5   QYIQSLPPETLARLADSASPEVLEAMRRNVSGLLGSLPSDHFEVTIQTSRENLAQLLASS 64

Query: 153 IITG 156
           ++TG
Sbjct: 65  MMTG 68

This family contains several uncharacterized plant proteins. Length = 85

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	360
PF05542	86	DUF760: Protein of unknown function (DUF760); Inte	99.96
PF05542	86	DUF760: Protein of unknown function (DUF760); Inte	99.95

>PF05542 DUF760: Protein of unknown function (DUF760); InterPro: IPR008479 This entry contains uncharacterised proteins

Probab=99.96  E-value=1e-29  Score=205.66  Aligned_cols=86  Identities=38%  Similarity=0.582  Sum_probs=82.0

Q ss_pred             chHHHHHhhCChhHHhhhcCCCCHHHHHHHHHHHHHHHhhcccCCcccCCCCCcccccccccccccCCCcceeeeCHHHH
Q 018114          251 NSLLEYLRFLDPYMVKELSQPSSIEVEEIIHQLVQNILQRFFKDDASNNFKGHSIFTNAENLEEVNNENCHSIDTSRDYL  330 (360)
Q Consensus       251 N~LL~YLrSL~Pe~v~eLS~~aSpeV~eaM~~~V~gLLg~L~s~~~~sk~pPqs~~~~~~~~~~~~d~f~~~I~tsrd~L  330 (360)
                      |+||+|||+++|+.+++|++++||||+|+|+++|++|||+++         |             +++|+++|+|+|++|
T Consensus         1 n~L~~yi~~l~pe~~~~l~~~~s~ev~e~m~~~v~~llG~l~---------p-------------~~~~~~~i~~s~~~L   58 (86)
T PF05542_consen    1 NDLLQYIQSLKPERIQQLSEPASPEVLEAMKQHVSGLLGNLS---------P-------------SDQFNVTIQTSRENL   58 (86)
T ss_pred             ChHHHHHHHCCHHHHHHhhccCCHHHHHHHHHHHHHHHcCCC---------C-------------cccCcceeEECHHHH
Confidence            799999999999999999999999999999999999999991         2             489999999999999


Q ss_pred             HHHHHHHHHHhhhhhhhhhhhhHHhhhc
Q 018114          331 AKLLFWCMLLGHHLRGLENRLHLTCAVG  358 (360)
Q Consensus       331 ArLLfW~Mm~GY~LR~~E~RleLe~~L~  358 (360)
                      |+|||||||+|||||++|+|++|+++|.
T Consensus        59 a~L~~~~mm~GYfLr~~E~R~~Le~sL~   86 (86)
T PF05542_consen   59 AQLLAWSMMTGYFLRNAEQRLELERSLK   86 (86)
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHhcC
Confidence            9999999999999999999999999974

>PF05542 DUF760: Protein of unknown function (DUF760); InterPro: IPR008479 This entry contains uncharacterised proteins

Probab=99.95  E-value=3.2e-28  Score=197.02  Aligned_cols=84  Identities=31%  Similarity=0.475  Sum_probs=81.0

Q ss_pred             hHHHHHHhhcCCchhhhhccCCCHHHHHHHHHHHHHhhcCC-CCCCeeEEEEeccchHHHHHHHHHhhhhhhhhcccccc
Q 018114           89 RVIANMLKRIEPLDNSVISKGISESAKDSMKQTISSMLGLL-PSDQFSITVRLSKQPLHSLLVSSIITGISLMRNFDISV  167 (360)
Q Consensus        89 n~L~~yvqs~~Pe~is~~sk~asp~V~~amk~tI~gmLG~L-Ps~~F~VtItts~E~La~LL~S~mMTGY~L~Rnae~R~  167 (360)
                      |.||+||++++||.+++|++++||+|+|+|+++|.+|||.+ |+++|+++|+|++++||+|++++|||||| +||||+|+
T Consensus         1 n~L~~yi~~l~pe~~~~l~~~~s~ev~e~m~~~v~~llG~l~p~~~~~~~i~~s~~~La~L~~~~mm~GYf-Lr~~E~R~   79 (86)
T PF05542_consen    1 NDLLQYIQSLKPERIQQLSEPASPEVLEAMKQHVSGLLGNLSPSDQFNVTIQTSRENLAQLLAWSMMTGYF-LRNAEQRL   79 (86)
T ss_pred             ChHHHHHHHCCHHHHHHhhccCCHHHHHHHHHHHHHHHcCCCCcccCcceeEECHHHHHHHHHHHHHHhHH-HHHHHHHH
Confidence            78999999999999999999999999999999999999999 99999999999999999999999999999 59999999


Q ss_pred             hhhhhc
Q 018114          168 DGLKRL  173 (360)
Q Consensus       168 ~l~e~~  173 (360)
                      ++.+++
T Consensus        80 ~Le~sL   85 (86)
T PF05542_consen   80 ELERSL   85 (86)
T ss_pred             HHHHhc
Confidence            986654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	360
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-13
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 70.3 bits (171), Expect = 3e-13
 Identities = 53/418 (12%), Positives = 117/418 (27%), Gaps = 139/418 (33%)

Query: 19  NTGASFNPLHLPRAPFSRNHHHHHDVIRWPTRRGLF---PASYSATV--------SCLSS 67
           N    F   ++ R          +  +R    + L    PA     +        + ++ 
Sbjct: 121 NDNQVFAKYNVSR-------LQPYLKLR----QALLELRPAKN-VLIDGVLGSGKTWVAL 168

Query: 68  GGGVSNDDFVSTRKSNFDRG---------------FRVIANMLKRIEPLDNSVISKGISE 112
              V     V   +   D                   ++  +L +I+P   S      + 
Sbjct: 169 D--VCLSYKV---QCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNI 223

Query: 113 SAK-DSMKQTISSMLGLLPSDQFSITVRLSKQPLHSLLV------SSIITGISLMRNFDI 165
             +  S++  +  +L              SK   + LLV      +           F++
Sbjct: 224 KLRIHSIQAELRRLL-------------KSKPYENCLLVLLNVQNAKAW------NAFNL 264

Query: 166 S---------------VDGLKRLNFSVEGEVLDKHCEESENEG-----GEISVEDL---- 201
           S               +      + S++           E +       +   +DL    
Sbjct: 265 SCKILLTTRFKQVTDFLSAATTTHISLDHH--SMTLTPDEVKSLLLKYLDCRPQDLPREV 322

Query: 202 -EISPQVL---GDLSHDALNYIQKLQSDLSNVKEELNSMKHKNMLMESDKTCRNSLLEYL 257
              +P+ L    +   D L      +         +N  K   ++    ++  N L    
Sbjct: 323 LTTNPRRLSIIAESIRDGLATWDNWK--------HVNCDKLTTII----ESSLNVLEPAE 370

Query: 258 ---RFLD----------PYMVKEL--SQPSSIEVEEIIHQLVQNILQRFFKDDASNNFKG 302
               F            P ++  L        +V  ++++L +  L    K    +    
Sbjct: 371 YRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSL--VEKQPKESTISI 428

Query: 303 HSIF----TNAENLEEVNNE--NCHSIDTSRDYLAKLL-----FWCMLLGHHLRGLEN 349
            SI+       EN   ++    + ++I  + D    +      ++   +GHHL+ +E+
Sbjct: 429 PSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEH 486

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.1 bits (116), Expect = 2e-06
 Identities = 65/354 (18%), Positives = 111/354 (31%), Gaps = 97/354 (27%)

Query: 37  NHHHHH-DVIRWPTRRGLFPASYSATVSCLSSGGGVSNDDFVSTRKSNFDRGFRVIANML 95
           +HHHHH D        G     Y   +S       V  D FV     NFD   + + +M 
Sbjct: 1   HHHHHHMD-----FETGEHQYQYKDILS-------VFEDAFV----DNFD--CKDVQDMP 42

Query: 96  KRIEPLDNSVISKGISESAKDSMKQTISSMLGLLPSDQFSITVRLSKQPLHSLLVSSIIT 155
           K       S++SK   E     +             D  S T+RL      +LL      
Sbjct: 43  K-------SILSK---EEIDHIIMS----------KDAVSGTLRL----FWTLLSK---- 74

Query: 156 GISLMRNFDISVDGLKRLNFSVEGEVLDKHCEE-SENEGGEISVED-LEISPQVLGDLSH 213
              +++ F   V+ + R+N+      +     + S      I   D L    QV    + 
Sbjct: 75  QEEMVQKF---VEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNV 131

Query: 214 DALNYIQKLQSDLSNVKEELNSMKH------KNMLMESDKTCRNSLLEYLRFLDPYMVKE 267
             L    KL+  L  ++   N +        K  +      C +  ++  +    + +  
Sbjct: 132 SRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALD--VCLSYKVQ-CKM--DFKIFW 186

Query: 268 LSQPSSIEVEEIIHQLVQNILQRFFKDDASNNFKGHSIFTNAEN---------------- 311
           L+  +    E ++  L Q +L +   +  S +    +I     +                
Sbjct: 187 LNLKNCNSPETVLEML-QKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYEN 245

Query: 312 ----LEEVNNEN--------CHSIDTSR-----DYLAKLLFWCMLLGHHLRGLE 348
               L  V N          C  + T+R     D+L+      + L HH   L 
Sbjct: 246 CLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLT 299

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	360
1nkp_B	83	MAX protein, MYC proto-oncogene protein; transcrip	93.25
1hlo_A	80	Protein (transcription factor MAX); transcriptiona	91.64
1am9_A	82	Srebp-1A, protein (sterol regulatory element bindi	87.04
1nkp_A	88	C-MYC, MYC proto-oncogene protein; transcription,	86.52
1nlw_A	80	MAD protein, MAX dimerizer; transcription factor,	84.72
3he5_A	49	Synzip1; heterodimeric coiled-coil, de novo protei	80.32

>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B

Probab=93.25  E-value=0.076  Score=41.41  Aligned_cols=33  Identities=24%  Similarity=0.490  Sum_probs=29.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 018114          213 HDALNYIQKLQSDLSNVKEELNSMKHKNMLMES  245 (360)
Q Consensus       213 veA~~YI~~Lqsel~slk~EL~~~K~k~~~lq~  245 (360)
                      -.|.+||..|+.++..|+.|++++++++.+|+.
T Consensus        43 ~~Ai~YI~~L~~~~~~l~~e~~~L~~~~~~L~~   75 (83)
T 1nkp_B           43 DKATEYIQYMRRKNHTHQQDIDDLKRQNALLEQ   75 (83)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            579999999999999999999999988776543

>1hlo_A Protein (transcription factor MAX); transcriptional regulation, DNA binding, complex (transcription factor MAX/DNA), transcription/DNA complex; HET: DNA; 2.80A {Homo sapiens} SCOP: a.38.1.1

Probab=91.64  E-value=0.14  Score=39.80  Aligned_cols=28  Identities=21%  Similarity=0.459  Sum_probs=25.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 018114          213 HDALNYIQKLQSDLSNVKEELNSMKHKN  240 (360)
Q Consensus       213 veA~~YI~~Lqsel~slk~EL~~~K~k~  240 (360)
                      -.|.+||..|+.++..|++|+..++++|
T Consensus        53 ~~Ai~YI~~L~~~~~~L~~e~~~L~~~n   80 (80)
T 1hlo_A           53 DKATEYIQYMRRKNHTHQQDIDDLKRQN   80 (80)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            5799999999999999999999988753

>1am9_A Srebp-1A, protein (sterol regulatory element binding protein 1A); basic-helix-loop- helix-leucine zipper, transcription factor; HET: DNA; 2.30A {Homo sapiens} SCOP: a.38.1.1 PDB: 1ukl_C

Probab=87.04  E-value=0.67  Score=36.28  Aligned_cols=29  Identities=28%  Similarity=0.361  Sum_probs=25.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 018114          213 HDALNYIQKLQSDLSNVKEELNSMKHKNM  241 (360)
Q Consensus       213 veA~~YI~~Lqsel~slk~EL~~~K~k~~  241 (360)
                      -+|.+||..|+.++..|++|...++....
T Consensus        46 ~~Ai~YI~~Lq~~~~~L~~e~~~L~~~~~   74 (82)
T 1am9_A           46 RKAIDYIRFLQHSNQKLKQENLSLRTAVH   74 (82)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            58999999999999999999999886543

>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1

Probab=86.52  E-value=0.64  Score=37.05  Aligned_cols=31  Identities=16%  Similarity=0.301  Sum_probs=27.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 018114          213 HDALNYIQKLQSDLSNVKEELNSMKHKNMLM  243 (360)
Q Consensus       213 veA~~YI~~Lqsel~slk~EL~~~K~k~~~l  243 (360)
                      -.|.+||..|+.+...+..+.+.+++++.+|
T Consensus        48 ~~A~~YI~~L~~~~~~l~~~~~~L~~~n~~L   78 (88)
T 1nkp_A           48 KKATAYILSVQAEEQKLISEEDLLRKRREQL   78 (88)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5799999999999999999999998877755

>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1

Probab=84.72  E-value=1  Score=35.33  Aligned_cols=31  Identities=13%  Similarity=0.206  Sum_probs=27.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 018114          213 HDALNYIQKLQSDLSNVKEELNSMKHKNMLM  243 (360)
Q Consensus       213 veA~~YI~~Lqsel~slk~EL~~~K~k~~~l  243 (360)
                      -.|.+||..|+.+...++.|...+++++..|
T Consensus        43 ~kA~~yI~~L~~~~~~l~~e~~~L~~e~~~L   73 (80)
T 1nlw_A           43 TKAKLHIKKLEDSDRKAVHQIDQLQREQRHL   73 (80)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5799999999999999999999998776644

>3he5_A Synzip1; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}

Probab=80.32  E-value=2.1  Score=30.66  Aligned_cols=35  Identities=26%  Similarity=0.632  Sum_probs=30.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhhhccccccchHHHHHh
Q 018114          217 NYIQKLQSDLSNVKEELNSMKHKNMLMESDKTCRNSLLEYLR  258 (360)
Q Consensus       217 ~YI~~Lqsel~slk~EL~~~K~k~~~lq~q~~~~N~LL~YLr  258 (360)
                      +.+.+|+.|+.+|+.|-..+|+|+.       .+.+|..||.
T Consensus         3 nlvaqlenevaslenenetlkkknl-------hkkdliayle   37 (49)
T 3he5_A            3 NLVAQLENEVASLENENETLKKKNL-------HKKDLIAYLE   37 (49)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHH
T ss_pred             cHHHHHHHHHHHhhcccHHHHHhcc-------cHHHHHHHHH
Confidence            4678999999999999999998877       4788999984

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	360
d1uklc_	61	SREBP-2 {Human (Homo sapiens) [TaxId: 9606]}	90.8
d1nkpa_	88	Myc proto-oncogene protein {Human (Homo sapiens) [	86.23
d1nkpb_	83	Max protein {Human (Homo sapiens) [TaxId: 9606]}	85.43
d1nlwa_	79	Mad protein {Human (Homo sapiens) [TaxId: 9606]}	85.09
d1am9a_	80	SREBP-1a {Human (Homo sapiens) [TaxId: 9606]}	81.79

>d1uklc_ a.38.1.1 (C:) SREBP-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: HLH-like
superfamily: HLH, helix-loop-helix DNA-binding domain
family: HLH, helix-loop-helix DNA-binding domain
domain: SREBP-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.80  E-value=0.12  Score=36.60  Aligned_cols=31  Identities=26%  Similarity=0.336  Sum_probs=26.4

Q ss_pred             CChhHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 018114          211 LSHDALNYIQKLQSDLSNVKEELNSMKHKNM  241 (360)
Q Consensus       211 l~veA~~YI~~Lqsel~slk~EL~~~K~k~~  241 (360)
                      +=-+|-+||..||.++..|++|...++....
T Consensus        27 iL~~Ai~YI~~Lq~~~~~L~~e~~~L~~~~~   57 (61)
T d1uklc_          27 VLRKAIDYIKYLQQVNHKLRQENMVLKLANQ   57 (61)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3368999999999999999999999876544

>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: HLH-like
superfamily: HLH, helix-loop-helix DNA-binding domain
family: HLH, helix-loop-helix DNA-binding domain
domain: Myc proto-oncogene protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.23  E-value=0.37  Score=35.91  Aligned_cols=30  Identities=17%  Similarity=0.279  Sum_probs=26.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 018114          213 HDALNYIQKLQSDLSNVKEELNSMKHKNML  242 (360)
Q Consensus       213 veA~~YI~~Lqsel~slk~EL~~~K~k~~~  242 (360)
                      -.|.+||..|+.++..++.+...+++++..
T Consensus        48 ~~A~~yI~~L~~~~~~l~~~~~~l~~~~~~   77 (88)
T d1nkpa_          48 KKATAYILSVQAEEQKLISEEDLLRKRREQ   77 (88)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            579999999999999999999988876654

>d1nkpb_ a.38.1.1 (B:) Max protein {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: HLH-like
superfamily: HLH, helix-loop-helix DNA-binding domain
family: HLH, helix-loop-helix DNA-binding domain
domain: Max protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.43  E-value=0.38  Score=35.48  Aligned_cols=31  Identities=23%  Similarity=0.480  Sum_probs=27.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 018114          213 HDALNYIQKLQSDLSNVKEELNSMKHKNMLM  243 (360)
Q Consensus       213 veA~~YI~~Lqsel~slk~EL~~~K~k~~~l  243 (360)
                      -.|.+||..|+.++..+.+++..+++++.++
T Consensus        43 ~~A~~yI~~L~~~~~~l~~~~~~l~~~~~~L   73 (83)
T d1nkpb_          43 DKATEYIQYMRRKNHTHQQDIDDLKRQNALL   73 (83)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4799999999999999999999988776654

>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: HLH-like
superfamily: HLH, helix-loop-helix DNA-binding domain
family: HLH, helix-loop-helix DNA-binding domain
domain: Mad protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.09  E-value=0.47  Score=34.63  Aligned_cols=31  Identities=13%  Similarity=0.206  Sum_probs=26.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 018114          213 HDALNYIQKLQSDLSNVKEELNSMKHKNMLM  243 (360)
Q Consensus       213 veA~~YI~~Lqsel~slk~EL~~~K~k~~~l  243 (360)
                      -.|.+||..|+.++..++++...++++...|
T Consensus        43 ~~A~~yI~~L~~~~~~l~~~~~~L~~~~~~L   73 (79)
T d1nlwa_          43 TKAKLHIKKLEDSDRKAVHQIDQLQREQRHL   73 (79)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5799999999999999999999888765543

>d1am9a_ a.38.1.1 (A:) SREBP-1a {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: HLH-like
superfamily: HLH, helix-loop-helix DNA-binding domain
family: HLH, helix-loop-helix DNA-binding domain
domain: SREBP-1a
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.79  E-value=0.76  Score=33.70  Aligned_cols=29  Identities=28%  Similarity=0.361  Sum_probs=25.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 018114          213 HDALNYIQKLQSDLSNVKEELNSMKHKNM  241 (360)
Q Consensus       213 veA~~YI~~Lqsel~slk~EL~~~K~k~~  241 (360)
                      -.|.+||..|+.++..|++|...++....
T Consensus        46 ~~a~~yI~~L~~~~~~L~~e~~~lk~~~~   74 (80)
T d1am9a_          46 RKAIDYIRFLQHSNQKLKQENLSLRTAVH   74 (80)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            67999999999999999999998875543