Citrus Sinensis ID: 018339

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------
MISWQPNLNKFLSLGRPAWKEARDMLQKLLSSNEATLRDNANLRQKSLVPMGKVEMLLPMEIGDYTDFFSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPSGNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYVPLGPFLGKSFGTTLSPWIVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTINGCNLRSGDLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPSTP
cccccccHHHHHHccHHHHHHHHHHHHHHHccccccccccHHHHHcccccccccccccccccccEEEEEccHHHHHHHHHHHcccccccccccccccEEEEcccccEEEccccEEcccccccccccccccccccccccccccEEEEEcccccccccccHHHHHHccccEEEEEcccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEccccccEEEEEcccccccccHHHHHHHHHHcccccccccEEcccccccccccccccEEEEEcccccccccccccccccccccEEEEEEEEccccEEEEEEEEEEEEEEccc
ccccccccHHHHHHcHHHHHHHHHHHHHHHEcccHHHHccHHHHHHHEEEHHHEEEEcccccccEEEEcccHHHHHHHHHHHHcccccccccccccccEEEcccccEEEccccEEccEEEEccccccccEEEEcccEEcEEEEEEEEcccccccccccHHHHHHHEEEEEEEEccEEHHHHHHHcccccccHHHHccEEEcccEEEHHHHHHHEEccccccccccHHHccccccEEccEEEEEEEcccccccEEEEEEEHHHccccHHHHHHHHHccccccccccEEEccccccccHHHccEHHHHcccccccEEccccEEcccccccEEEEEEEEEccccEEEcccEEEEEEcccc
miswqpnlNKFLSLGRPAWKEARDMLQKLLSSneatlrdnanlrqkslvpmgkvemllpmeigdytdffssmhhakncgtifrgpanavpanwfhlpiayhgrassvvisgtdivrprgqfapsgnspppfgpsqkldFELEMAAvvgpgnelgkpidvneaADHIFGVMLMNDWSARDIQaweyvplgpflgksfgttlspwivtldalepfacdspkqdpqplpylaeKISKNYDISlevqikpagkedscvvtrsNFKYLYWTLTQQLAHHTingcnlrsgdllgtgtisgpepeslgclleltwngqkplsldgftrkfledgdevtftgfckgngytvgfgtcsgkivpstp
MISWQPNLNKFLSLGRPAWKEARDMLQKLLSsneatlrdnanlrqkslvpmgkVEMLLPMEIGDYTDFFSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPSGNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYVPLGPFLGKSFGTTLSPWIVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVqikpagkedscvVTRSNFKYLYWTLTQQLAHHTINGCNLRSGDLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGfckgngytvgfgtcsgkivpstp
MISWQPNLNKFLSLGRPAWKEARDMLQKLLSSNEATLRDNANLRQKSLVPMGKVEMLLPMEIGDYTDFFSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFApsgnspppfgpsQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYVPLGPFLGKSFGTTLSPWIVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTINGCNLRSGDLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPSTP
**********FLSL*********************************LVPMGKVEMLLPMEIGDYTDFFSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIV*************************LEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYVPLGPFLGKSFGTTLSPWIVTLDALEPFACD*********PYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTINGCNLRSGDLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKI*****
MISWQPNLNKFLSLGRPAWKEARDMLQKLLSSNEATLRDNANLRQKSLVPMGKVEMLLPMEIGDYTDFFSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPSGNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYVPLGPFLGKSFGTTLSPWIVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTINGCNLRSGDLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPS**
MISWQPNLNKFLSLGRPAWKEARDMLQKLLSSNEATLRDNANLRQKSLVPMGKVEMLLPMEIGDYTDFFSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPSGNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYVPLGPFLGKSFGTTLSPWIVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTINGCNLRSGDLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPSTP
*ISWQPNLNKFLSLGRPAWKEARDMLQKLLSSNEATLRDNANLRQKSLVPMGKVEMLLPMEIGDYTDFFSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPSGNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYVPLGPFLGKSFGTTLSPWIVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTINGCNLRSGDLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPS**
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MISWQPNLNKFLSLGRPAWKEARDMxxxxxxxxxxxxxxxxxxxxxSLVPMGKVEMLLPMEIGDYTDFFSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPSGNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYVPLGPFLGKSFGTTLSPWIVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTINGCNLRSGDLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPSTP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query357 2.2.26 [Sep-21-2011]
A5PKH3419 Fumarylacetoacetase OS=Bo yes no 0.983 0.837 0.602 1e-130
P16930419 Fumarylacetoacetase OS=Ho yes no 0.983 0.837 0.596 1e-127
P25093419 Fumarylacetoacetase OS=Ra yes no 0.983 0.837 0.585 1e-126
P35505419 Fumarylacetoacetase OS=Mu yes no 0.983 0.837 0.579 1e-124
Q1ZXQ1427 Fumarylacetoacetase OS=Di yes no 0.983 0.822 0.564 1e-118
Q00770431 Fumarylacetoacetase OS=Em yes no 0.974 0.807 0.533 1e-101
O06724301 Uncharacterized protein Y yes no 0.352 0.418 0.269 1e-05
Q59050237 Uncharacterized protein M yes no 0.232 0.350 0.279 6e-05
Q2KIB0314 Fumarylacetoacetate hydro no no 0.436 0.496 0.293 0.0001
O28058250 Uncharacterized protein A no no 0.333 0.476 0.293 0.0002
>sp|A5PKH3|FAAA_BOVIN Fumarylacetoacetase OS=Bos taurus GN=FAH PE=2 SV=1 Back     alignment and function desciption
 Score =  465 bits (1197), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 212/352 (60%), Positives = 266/352 (75%), Gaps = 1/352 (0%)

Query: 5   QPNLNKFLSLGRPAWKEARDMLQKLLSSNEATLRDNANLRQKSLVPMGKVEMLLPMEIGD 64
           +P LN F+ LG+ AWKEAR  LQ LLS+++A LRD+  LRQ++        M LP  IGD
Sbjct: 64  KPTLNSFMGLGQAAWKEARAFLQNLLSASQARLRDDVELRQRAFTSQASATMYLPATIGD 123

Query: 65  YTDFFSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPS 124
           YTDF+SS HHA N G +FRG  NA+  NW HLP+ YHGRASSVV+SGT I RP GQ  P 
Sbjct: 124 YTDFYSSRHHATNVGVMFRGKENALMPNWLHLPVGYHGRASSVVVSGTPIRRPLGQMRPD 183

Query: 125 GNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWE 184
            + PP +G  + LDFELEMA  VGPGN+LG+PI +++A +HIFG++LMNDWSARDIQ WE
Sbjct: 184 DSKPPVYGACKLLDFELEMAFFVGPGNKLGEPIPISKAHEHIFGMVLMNDWSARDIQKWE 243

Query: 185 YVPLGPFLGKSFGTTLSPWIVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQI 244
           YVPLGPFLGKSFGTT+SPW+V +DAL PFA  +P+QDP+PLPYL       +DI+L V +
Sbjct: 244 YVPLGPFLGKSFGTTISPWVVPMDALMPFAVSNPEQDPKPLPYLCHDQPYTFDINLSVAL 303

Query: 245 KPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTINGCNLRSGDLLGTGTISGPEPESLGCLL 304
           K  G   +  + RSNFKY+YWT+ QQL HH++NGCNL+ GDLL +GTISGPEPES GC+L
Sbjct: 304 KGEGMSQAATICRSNFKYMYWTMLQQLTHHSVNGCNLQPGDLLASGTISGPEPESFGCML 363

Query: 305 ELTWNGQKPLSL-DGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPS 355
           EL+W G + + L +G TRKFL DGDEV  TG C+G+GY +GFG C+GK++P+
Sbjct: 364 ELSWKGTRAVELGNGQTRKFLLDGDEVIMTGHCQGDGYRIGFGQCAGKVLPA 415

Bos taurus (taxid: 9913)
EC: 3EC: .EC: 7EC: .EC: 1EC: .EC: 2
>sp|P16930|FAAA_HUMAN Fumarylacetoacetase OS=Homo sapiens GN=FAH PE=1 SV=2 Back     alignment and function description
>sp|P25093|FAAA_RAT Fumarylacetoacetase OS=Rattus norvegicus GN=Fah PE=1 SV=1 Back     alignment and function description
>sp|P35505|FAAA_MOUSE Fumarylacetoacetase OS=Mus musculus GN=Fah PE=1 SV=2 Back     alignment and function description
>sp|Q1ZXQ1|FAAA_DICDI Fumarylacetoacetase OS=Dictyostelium discoideum GN=fah PE=3 SV=1 Back     alignment and function description
>sp|Q00770|FAAA_EMENI Fumarylacetoacetase OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=fahA PE=1 SV=3 Back     alignment and function description
>sp|O06724|YISK_BACSU Uncharacterized protein YisK OS=Bacillus subtilis (strain 168) GN=yisK PE=2 SV=1 Back     alignment and function description
>sp|Q59050|Y1656_METJA Uncharacterized protein MJ1656 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1656 PE=3 SV=1 Back     alignment and function description
>sp|Q2KIB0|FAHD2_BOVIN Fumarylacetoacetate hydrolase domain-containing protein 2 OS=Bos taurus GN=FAHD2 PE=2 SV=1 Back     alignment and function description
>sp|O28058|Y2225_ARCFU Uncharacterized protein AF_2225 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=AF_2225 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query357
224086373419 predicted protein [Populus trichocarpa] 0.983 0.837 0.857 1e-179
255559084421 fumarylacetoacetate hydrolase, putative 0.983 0.833 0.860 1e-179
147771009419 hypothetical protein VITISV_033628 [Viti 0.985 0.840 0.847 1e-178
359495556419 PREDICTED: fumarylacetoacetase-like [Vit 0.985 0.840 0.844 1e-177
297844060421 hypothetical protein ARALYDRAFT_471353 [ 0.988 0.838 0.807 1e-172
22329501421 fumarylacetoacetase [Arabidopsis thalian 0.988 0.838 0.807 1e-172
449434018430 PREDICTED: fumarylacetoacetase-like [Cuc 0.985 0.818 0.801 1e-168
357447871421 Fumarylacetoacetase [Medicago truncatula 0.988 0.838 0.790 1e-168
388508774421 unknown [Lotus japonicus] 0.991 0.840 0.785 1e-166
356555724421 PREDICTED: fumarylacetoacetase-like [Gly 0.988 0.838 0.770 1e-165
>gi|224086373|ref|XP_002307870.1| predicted protein [Populus trichocarpa] gi|118481189|gb|ABK92546.1| unknown [Populus trichocarpa] gi|222853846|gb|EEE91393.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  634 bits (1636), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 301/351 (85%), Positives = 326/351 (92%)

Query: 5   QPNLNKFLSLGRPAWKEARDMLQKLLSSNEATLRDNANLRQKSLVPMGKVEMLLPMEIGD 64
           QPNLNKFL+LGRPAWKEAR  LQ LLS++EA LRDN NLR+KSLVPM KVEMLLP+ IGD
Sbjct: 68  QPNLNKFLALGRPAWKEARATLQNLLSADEAKLRDNPNLREKSLVPMSKVEMLLPIAIGD 127

Query: 65  YTDFFSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPS 124
           YTDFFSSMHHA+NCG +FRGP NA+  NWF LPIAYHGR+SS+V+SGTDI+RPRGQ  PS
Sbjct: 128 YTDFFSSMHHARNCGIMFRGPENAINPNWFQLPIAYHGRSSSIVVSGTDIIRPRGQGHPS 187

Query: 125 GNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWE 184
           GNSPP FGPS+KLDFELEMAAVVGPGNELGKP+DVNEA DHIFG++LMNDWSARDIQAWE
Sbjct: 188 GNSPPYFGPSRKLDFELEMAAVVGPGNELGKPVDVNEAGDHIFGLVLMNDWSARDIQAWE 247

Query: 185 YVPLGPFLGKSFGTTLSPWIVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQI 244
           YVPLGPFLGKSFGTTLSPWIVTLDALEPFACD+PKQDPQPLPYLAEKISKNYDISLEVQI
Sbjct: 248 YVPLGPFLGKSFGTTLSPWIVTLDALEPFACDAPKQDPQPLPYLAEKISKNYDISLEVQI 307

Query: 245 KPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTINGCNLRSGDLLGTGTISGPEPESLGCLL 304
           KPAG+EDSCVVTRSNF +LYWT+TQQLAHHTINGCNLR GDLLG+GTISGPEPES GCLL
Sbjct: 308 KPAGQEDSCVVTRSNFNHLYWTVTQQLAHHTINGCNLRPGDLLGSGTISGPEPESYGCLL 367

Query: 305 ELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPS 355
           ELTWNGQK LSL+G TRKFLEDGDEV F+G  KG+GY VGFGTCSGKI+PS
Sbjct: 368 ELTWNGQKSLSLNGTTRKFLEDGDEVVFSGCSKGDGYKVGFGTCSGKILPS 418

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255559084|ref|XP_002520564.1| fumarylacetoacetate hydrolase, putative [Ricinus communis] gi|223540224|gb|EEF41797.1| fumarylacetoacetate hydrolase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|147771009|emb|CAN77935.1| hypothetical protein VITISV_033628 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359495556|ref|XP_003635021.1| PREDICTED: fumarylacetoacetase-like [Vitis vinifera] gi|297741817|emb|CBI33122.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297844060|ref|XP_002889911.1| hypothetical protein ARALYDRAFT_471353 [Arabidopsis lyrata subsp. lyrata] gi|297335753|gb|EFH66170.1| hypothetical protein ARALYDRAFT_471353 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|22329501|ref|NP_172669.2| fumarylacetoacetase [Arabidopsis thaliana] gi|20334820|gb|AAM16166.1| At1g12050/F12F1_8 [Arabidopsis thaliana] gi|332190709|gb|AEE28830.1| fumarylacetoacetase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449434018|ref|XP_004134793.1| PREDICTED: fumarylacetoacetase-like [Cucumis sativus] gi|449516307|ref|XP_004165188.1| PREDICTED: fumarylacetoacetase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|357447871|ref|XP_003594211.1| Fumarylacetoacetase [Medicago truncatula] gi|87241152|gb|ABD33010.1| Fumarylacetoacetase [Medicago truncatula] gi|355483259|gb|AES64462.1| Fumarylacetoacetase [Medicago truncatula] Back     alignment and taxonomy information
>gi|388508774|gb|AFK42453.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|356555724|ref|XP_003546180.1| PREDICTED: fumarylacetoacetase-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query357
TAIR|locus:2008845421 FAH "AT1G12050" [Arabidopsis t 0.988 0.838 0.781 6.3e-156
UNIPROTKB|A5PKH3419 FAH "Fumarylacetoacetase" [Bos 0.983 0.837 0.590 8.8e-118
UNIPROTKB|F1MYZ7419 FAH "Fumarylacetoacetase" [Bos 0.983 0.837 0.590 8.8e-118
UNIPROTKB|F1NYW8421 FAH "Uncharacterized protein" 0.983 0.833 0.605 7.9e-117
UNIPROTKB|F1RIF3419 FAH "Uncharacterized protein" 0.983 0.837 0.590 1.5e-115
UNIPROTKB|P16930419 FAH "Fumarylacetoacetase" [Hom 0.983 0.837 0.585 2.4e-115
RGD|61932419 Fah "fumarylacetoacetate hydro 0.983 0.837 0.571 1.1e-112
UNIPROTKB|Q53XA7349 DKFZp686F13224 "Fumarylacetoac 0.963 0.985 0.582 2.2e-112
MGI|MGI:95482419 Fah "fumarylacetoacetate hydro 0.983 0.837 0.568 7.6e-112
UNIPROTKB|E2RS63418 FAH "Uncharacterized protein" 0.985 0.842 0.573 1.6e-111
TAIR|locus:2008845 FAH "AT1G12050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1520 (540.1 bits), Expect = 6.3e-156, P = 6.3e-156
 Identities = 276/353 (78%), Positives = 309/353 (87%)

Query:     5 QPNLNKFLSLGRPAWKEARDMLQKLLSSNEATLRDNANLRQKSLVPMGKVEMLLPMEIGD 64
             QPNLNKFL++GRPAWKEAR  LQ++LSSNE  LRDN  LR+KS   M KVEM++PM IGD
Sbjct:    69 QPNLNKFLAMGRPAWKEARSTLQRILSSNEPILRDNDVLRRKSFHQMSKVEMIVPMVIGD 128

Query:    65 YTDFFSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAXX 124
             YTDFF+SMHHAKNCG +FRGP NA+  NWF LPIAYHGRASS+VISGTDI+RPRGQ    
Sbjct:   129 YTDFFASMHHAKNCGLMFRGPENAINPNWFRLPIAYHGRASSIVISGTDIIRPRGQGHPQ 188

Query:   125 XXXXXXXXXXQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWE 184
                       +KLDFELEMAAVVGPGNELGKPIDVN AADHIFG++LMNDWSARDIQAWE
Sbjct:   189 GNSEPYFGPSKKLDFELEMAAVVGPGNELGKPIDVNNAADHIFGLLLMNDWSARDIQAWE 248

Query:   185 YVPLGPFLGKSFGTTLSPWIVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQI 244
             YVPLGPFLGKSFGTT+SPWIVTLDALEPF C +PKQDP PLPYLAEK S NYDISLEVQ+
Sbjct:   249 YVPLGPFLGKSFGTTISPWIVTLDALEPFGCQAPKQDPPPLPYLAEKESVNYDISLEVQL 308

Query:   245 KPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTINGCNLRSGDLLGTGTISGPEPESLGCLL 304
             KP+G++DSCV+T+SNF+ LYWT+TQQLAHHT+NGCNLR GDLLGTGTISGPEP+S GCLL
Sbjct:   309 KPSGRDDSCVITKSNFQNLYWTITQQLAHHTVNGCNLRPGDLLGTGTISGPEPDSYGCLL 368

Query:   305 ELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPSTP 357
             ELTWNGQKPLSL+G T+ FLEDGD+VTF+G CKG+GY VGFGTC+GKIVPS P
Sbjct:   369 ELTWNGQKPLSLNGTTQTFLEDGDQVTFSGVCKGDGYNVGFGTCTGKIVPSPP 421
GO:0004334 "fumarylacetoacetase activity" evidence=ISS;IDA
GO:0009072 "aromatic amino acid family metabolic process" evidence=ISS
GO:0005829 "cytosol" evidence=IDA
GO:0015996 "chlorophyll catabolic process" evidence=RCA
GO:1902000 "homogentisate catabolic process" evidence=IDA
UNIPROTKB|A5PKH3 FAH "Fumarylacetoacetase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1MYZ7 FAH "Fumarylacetoacetase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1NYW8 FAH "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1RIF3 FAH "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|P16930 FAH "Fumarylacetoacetase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|61932 Fah "fumarylacetoacetate hydrolase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q53XA7 DKFZp686F13224 "Fumarylacetoacetase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:95482 Fah "fumarylacetoacetate hydrolase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E2RS63 FAH "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
A5PKH3FAAA_BOVIN3, ., 7, ., 1, ., 20.60220.98310.8377yesno
P35505FAAA_MOUSE3, ., 7, ., 1, ., 20.57950.98310.8377yesno
Q1ZXQ1FAAA_DICDI3, ., 7, ., 1, ., 20.56460.98310.8220yesno
P25093FAAA_RAT3, ., 7, ., 1, ., 20.58520.98310.8377yesno
P16930FAAA_HUMAN3, ., 7, ., 1, ., 20.59650.98310.8377yesno
Q00770FAAA_EMENI3, ., 7, ., 1, ., 20.53330.97470.8074yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.7.1.20.946
3rd Layer3.7.10.963

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query357
PLN02856424 PLN02856, PLN02856, fumarylacetoacetase 0.0
TIGR01266415 TIGR01266, fum_ac_acetase, fumarylacetoacetase 0.0
pfam01557207 pfam01557, FAA_hydrolase, Fumarylacetoacetate (FAA 2e-36
COG0179266 COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxo 3e-34
pfam09298101 pfam09298, DUF1969, Domain of unknown function (DU 2e-16
TIGR02303245 TIGR02303, HpaG-C-term, 4-hydroxyphenylacetate deg 0.004
>gnl|CDD|215461 PLN02856, PLN02856, fumarylacetoacetase Back     alignment and domain information 
 Score =  683 bits (1765), Expect = 0.0
 Identities = 266/355 (74%), Positives = 296/355 (83%), Gaps = 2/355 (0%)

Query: 5   QPNLNKFLSLGRPAWKEARDMLQKLLSSNEATLRDNANLRQKSLVPMGKVEMLLPMEIGD 64
           QP LNKF+++GRPAWKEAR  LQ+LLS++E  LRDN+ LR+K+  PM  VEMLLP  IGD
Sbjct: 70  QPTLNKFMAMGRPAWKEARSTLQRLLSADEPALRDNSELRKKAFHPMSDVEMLLPAVIGD 129

Query: 65  YTDFFSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAP- 123
           YTDFFSS  HA N GT+FRGP NA+  NW HLPI YHGRASSVV SGTDI RPRGQ  P 
Sbjct: 130 YTDFFSSREHATNVGTMFRGPENALNPNWLHLPIGYHGRASSVVPSGTDIRRPRGQLHPN 189

Query: 124 SGNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAW 183
            G+S P FGPS KLDFELEMAA VGPGNELGKPI VNEA DHIFG++LMNDWSARDIQ W
Sbjct: 190 DGSSRPYFGPSAKLDFELEMAAFVGPGNELGKPIPVNEAKDHIFGLVLMNDWSARDIQKW 249

Query: 184 EYVPLGPFLGKSFGTTLSPWIVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQ 243
           EYVPLGPFLGKSF TT+SPWIVTLDALEPF CD+P QDP PLPYLAEK  K+YDISLEV 
Sbjct: 250 EYVPLGPFLGKSFATTISPWIVTLDALEPFRCDAPAQDPPPLPYLAEKNRKSYDISLEVA 309

Query: 244 IKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTINGCNLRSGDLLGTGTISGPEPESLGCL 303
           IKPAG+  + VV RSNFK+LYWTL QQLAHHT+NGCNLR GDLLG+GTISGPEP SLGCL
Sbjct: 310 IKPAGQSKASVVCRSNFKHLYWTLAQQLAHHTVNGCNLRPGDLLGSGTISGPEPGSLGCL 369

Query: 304 LELTWNGQKPLSL-DGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPSTP 357
           LELTW G + +SL  G  RKFLEDGDEV  +G+CKG+GY VGFGTCSGK++P+ P
Sbjct: 370 LELTWAGSREVSLEGGTRRKFLEDGDEVVLSGWCKGDGYRVGFGTCSGKVLPALP 424

Length = 424
>gnl|CDD|162276 TIGR01266, fum_ac_acetase, fumarylacetoacetase Back     alignment and domain information
>gnl|CDD|216570 pfam01557, FAA_hydrolase, Fumarylacetoacetate (FAA) hydrolase family Back     alignment and domain information
>gnl|CDD|223257 COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|220168 pfam09298, DUF1969, Domain of unknown function (DUF1969) Back     alignment and domain information
>gnl|CDD|131356 TIGR02303, HpaG-C-term, 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 357
PLN02856424 fumarylacetoacetase 100.0
TIGR01266415 fum_ac_acetase fumarylacetoacetase. This enzyme ca 100.0
KOG2843420 consensus Fumarylacetoacetase [Carbohydrate transp 100.0
COG0179266 MhpD 2-keto-4-pentenoate hydratase/2-oxohepta-3-en 100.0
TIGR02303245 HpaG-C-term 4-hydroxyphenylacetate degradation bif 100.0
KOG1535217 consensus Predicted fumarylacetoacetate hydralase 100.0
PRK15203 429 4-hydroxyphenylacetate degradation bifunctional is 100.0
PRK10691219 hypothetical protein; Provisional 100.0
PRK15203429 4-hydroxyphenylacetate degradation bifunctional is 100.0
PRK12764 500 hypothetical protein; Provisional 100.0
PF01557218 FAA_hydrolase: Fumarylacetoacetate (FAA) hydrolase 100.0
TIGR02305205 HpaG-N-term 4-hydroxyphenylacetate degradation bif 100.0
TIGR03220255 catechol_dmpE 2-oxopent-4-enoate hydratase. Member 99.9
PRK11342262 mhpD 2-keto-4-pentenoate hydratase; Provisional 99.87
TIGR02312267 HpaH 2-oxo-hepta-3-ene-1,7-dioic acid hydratase. T 99.77
COG3970379 Fumarylacetoacetate (FAA) hydrolase family protein 99.59
TIGR03218263 catechol_dmpH 4-oxalocrotonate decarboxylase. Memb 99.57
COG3971264 2-keto-4-pentenoate hydratase [Secondary metabolit 99.47
PF11010194 DUF2848: Protein of unknown function (DUF2848); In 98.18
PF09298107 FAA_hydrolase_N: Fumarylacetoacetase N-terminal; I 97.77
COG3802333 GguC Uncharacterized protein conserved in bacteria 97.74
>PLN02856 fumarylacetoacetase Back     alignment and domain information 
Probab=100.00  E-value=5.6e-81  Score=622.82  Aligned_cols=356  Identities=75%  Similarity=1.282  Sum_probs=329.6

Q ss_pred             CcCcccHHHHHhCCchHHHHHHHHHHHHHhcCchhhhhhhhhccCccccCCCceecCCeeccccccccccHHHHHHhccc
Q 018339            2 ISWQPNLNKFLSLGRPAWKEARDMLQKLLSSNEATLRDNANLRQKSLVPMGKVEMLLPMEIGDYTDFFSSMHHAKNCGTI   81 (357)
Q Consensus         2 ~~~~~~l~~f~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ll~P~~~~~~~~~~~~~~H~~~~g~~   81 (357)
                      +|.+++||.|+++|++.|.++|+.|+++|+.....++++..+....++|+++|+|++|+.+++|++|++|.+|+.|+|+.
T Consensus        67 ~f~~~~Ln~f~alg~~~~~~~R~~l~~~l~~~~~~l~~~~~~~~~~l~~~~~v~l~~P~~~~~~~df~~~~~Ha~n~g~~  146 (424)
T PLN02856         67 CFSQPTLNKFMAMGRPAWKEARSTLQRLLSADEPALRDNSELRKKAFHPMSDVEMLLPAVIGDYTDFFSSREHATNVGTM  146 (424)
T ss_pred             cccCcCHHHHHhCCHHHHHHHHHHHHHHhhcCCcccccchhhhccceeehhhceEcCCCccceEEEEecHHHHHHHhhhh
Confidence            68999999999999999999999999999887766666555666678999999999999999999999999999999998


Q ss_pred             cCCCCCCCCCCCCCCceeeecCCcceecCCCeeecCCCCCCC-CCCCCCCCCCCCCceeceEEEEEEcCCCCCCCCCCHH
Q 018339           82 FRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAP-SGNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDVN  160 (357)
Q Consensus        82 ~~~~~~~~~p~~~~~P~~f~k~~ssv~~~g~~I~~P~~~~~~-~~~~~~~~~~~~~ld~E~ELavVIgk~~~~g~~i~~e  160 (357)
                      |+++.++.+|+|.+.|++|.|++||++++|++|.+|.+|..+ .+...|.|.++..+|||+||++||||+++.|++|+++
T Consensus       147 fr~~~~~l~p~~~~~Pv~y~gr~sSvv~sg~~I~rP~gq~~~~~~~~~p~f~~s~~lDyE~ELavVIGk~~~~g~~I~~~  226 (424)
T PLN02856        147 FRGPENALNPNWLHLPIGYHGRASSVVPSGTDIRRPRGQLHPNDGSSRPYFGPSAKLDFELEMAAFVGPGNELGKPIPVN  226 (424)
T ss_pred             ccCCccCCCcccccCCCEEcCCCceEEcCCCceeCCCCCccCCCCCCCCcccCcCceEEEEEEEEEECcCccccCCCCHH
Confidence            887777788999999999999999999999999999987644 3334588888999999999999999987779999999


Q ss_pred             HHhhceeEEEEeecCchhhhhhhhhcCCCCcccccCCCccCCccccccccCCccCCCCCCCCCCCccccccCCcceeEEE
Q 018339          161 EAADHIFGVMLMNDWSARDIQAWEYVPLGPFLGKSFGTTLSPWIVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISL  240 (357)
Q Consensus       161 ~A~~~I~Gy~l~nD~saRd~q~~~~~~l~~~~aK~fdt~lGP~ivt~d~l~~~~~~~~~~~~~~~~~~~~~~~~~l~i~l  240 (357)
                      +|++||+|||++||||+||+|.|++.+++|+++|+|+|++||||||.|+++++++..|.+|+..++||++++..++.|.|
T Consensus       227 ~A~d~IfGytl~ND~SARDiQ~wE~~plgpf~gKsF~t~igPwIVt~dal~p~r~~~~~~dp~~l~yl~~~~~~~~~i~l  306 (424)
T PLN02856        227 EAKDHIFGLVLMNDWSARDIQKWEYVPLGPFLGKSFATTISPWIVTLDALEPFRCDAPAQDPPPLPYLAEKNRKSYDISL  306 (424)
T ss_pred             HHHhhheEEEEeeechhhhhhhhhcccCCcccccCCCCCCcCeEEcccccccccccccccCcccccccccccccceeEEE
Confidence            99999999999999999999999998899999999999999999999999999988899999999999999999999999


Q ss_pred             EEEEeeCCCCCCeEEEecchhhhhcCHHHHHHHHHHcCcccCCCCEEEcCCCCCCccCCCCceEEEEecCcccccc-CCC
Q 018339          241 EVQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTINGCNLRSGDLLGTGTISGPEPESLGCLLELTWNGQKPLSL-DGF  319 (357)
Q Consensus       241 ~v~i~~~~~~NGe~~q~~~t~~M~~~~~~lIa~~~S~~~tL~pGDvI~TGTp~Gv~~~~~G~~~e~~i~g~~~l~~-~~~  319 (357)
                      +|+++.|++.||+++|++++++|+|+++|||+|++|++++|+|||||+||||+|+++.+.||.+|++++|..++++ +++
T Consensus       307 ~v~v~~nG~~ng~~~q~~nt~~M~ws~~qlIah~~s~g~tL~pGDLi~TGTpsG~~~~~~G~llElt~~G~~p~~l~~g~  386 (424)
T PLN02856        307 EVAIKPAGQSKASVVCRSNFKHLYWTLAQQLAHHTVNGCNLRPGDLLGSGTISGPEPGSLGCLLELTWAGSREVSLEGGT  386 (424)
T ss_pred             EEEEeeCCcccceeEEcCCHHHcCCCHHHHHHHHHhCCeecCCCCEEEeCCCCCCccCCCCCEEEEEeCCccceEeccCC
Confidence            9988765555889999999999999999999986689999999999999999999999999999999999999999 566


Q ss_pred             CCcCCCCCCEEEEEEEEeCCCceeeeeeeeeeEeeCCC
Q 018339          320 TRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPSTP  357 (357)
Q Consensus       320 ~~~~L~~GD~V~~~~~~~~~~~~~~~G~~~~~v~~~~~  357 (357)
                      .++||+|||+|++++++..+|++||||+|+++|.|+.|
T Consensus       387 ~r~fL~dGD~V~l~g~~~~~g~~igfG~~~g~v~pa~~  424 (424)
T PLN02856        387 RRKFLEDGDEVVLSGWCKGDGYRVGFGTCSGKVLPALP  424 (424)
T ss_pred             ccccCCCCCEEEEEEEECCCCccEeeeeeeeEEecCCC
Confidence            79999999999999999999999999999999999976

>TIGR01266 fum_ac_acetase fumarylacetoacetase Back     alignment and domain information
>KOG2843 consensus Fumarylacetoacetase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG0179 MhpD 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>TIGR02303 HpaG-C-term 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit Back     alignment and domain information
>KOG1535 consensus Predicted fumarylacetoacetate hydralase [General function prediction only] Back     alignment and domain information
>PRK15203 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase; Provisional Back     alignment and domain information
>PRK10691 hypothetical protein; Provisional Back     alignment and domain information
>PRK15203 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase; Provisional Back     alignment and domain information
>PRK12764 hypothetical protein; Provisional Back     alignment and domain information
>PF01557 FAA_hydrolase: Fumarylacetoacetate (FAA) hydrolase family Mutations in Swiss:P16930 cause inherited tyrosinemia type I Back     alignment and domain information
>TIGR02305 HpaG-N-term 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit Back     alignment and domain information
>TIGR03220 catechol_dmpE 2-oxopent-4-enoate hydratase Back     alignment and domain information
>PRK11342 mhpD 2-keto-4-pentenoate hydratase; Provisional Back     alignment and domain information
>TIGR02312 HpaH 2-oxo-hepta-3-ene-1,7-dioic acid hydratase Back     alignment and domain information
>COG3970 Fumarylacetoacetate (FAA) hydrolase family protein [General function prediction only] Back     alignment and domain information
>TIGR03218 catechol_dmpH 4-oxalocrotonate decarboxylase Back     alignment and domain information
>COG3971 2-keto-4-pentenoate hydratase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PF11010 DUF2848: Protein of unknown function (DUF2848); InterPro: IPR021269 This bacterial family of proteins has no known function Back     alignment and domain information
>PF09298 FAA_hydrolase_N: Fumarylacetoacetase N-terminal; InterPro: IPR015377 Fumarylacetoacetase (3 Back     alignment and domain information
>COG3802 GguC Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query357
1qqj_A419 Crystal Structure Of Mouse Fumarylacetoacetate Hydr 1e-121
1qco_A423 Crystal Structure Of Fumarylacetoacetate Hydrolase 1e-121
1hyo_A421 Crystal Structure Of Fumarylacetoacetate Hydrolase 1e-121
1qcn_A421 Crystal Structure Of Fumarylacetoacetate Hydrolase 1e-116
>pdb|1QQJ|A Chain A, Crystal Structure Of Mouse Fumarylacetoacetate Hydrolase Refined At 1.55 Angstrom Resolution Length = 419 Back     alignment and structure 
Iteration: 1

 Score =  431 bits (1107), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 200/350 (57%), Positives = 249/350 (71%), Gaps = 1/350 (0%)
Query: 7   NLNKFLSLGRPAWKEARDMLQKLLSSNEATLRDNANLRQKSLVPMGKVEMLLPMEIGDYT 66
            LN F+ LG+ AWKEAR  LQ LLS+++A LRD+  LRQ++        M LP  IGDYT
Sbjct: 66  TLNNFMGLGQAAWKEARASLQNLLSASQARLRDDKELRQRAFTSQASATMHLPATIGDYT 125
Query: 67  DFFSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAXXXX 126
           DF+SS  HA N G +FRG  NA+  NW HLP+ YHGRASS+V+SGT I RP GQ      
Sbjct: 126 DFYSSRQHATNVGIMFRGKENALLPNWLHLPVGYHGRASSIVVSGTPIRRPMGQMRPDNS 185
Query: 127 XXXXXXXXQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYV 186
                   + LD ELEMA  VGPGN  G+PI +++A +HIFG++LMNDWSARDIQ WEYV
Sbjct: 186 KPPVYGACRLLDMELEMAFFVGPGNRFGEPIPISKAHEHIFGMVLMNDWSARDIQQWEYV 245
Query: 187 PLGPFLGKSFGTTLSPWIVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQIKP 246
           PLGPFLGKSFGTT+SPW+V +DAL PF   +PKQDP+PLPYL       +DI+L V +K 
Sbjct: 246 PLGPFLGKSFGTTISPWVVPMDALMPFVVPNPKQDPKPLPYLCHSQPYTFDINLSVSLKG 305
Query: 247 AGKEDSCVVTRSNFKYLYWTLTQQLAHHTINGCNLRSGDLLGTGTISGPEPESLGCLLEL 306
            G   +  + RSNFK++YWT+ QQL HH++NGCNLR GDLL +GTISG +PES G +LEL
Sbjct: 306 EGMSQAATICRSNFKHMYWTMLQQLTHHSVNGCNLRPGDLLASGTISGSDPESFGSMLEL 365
Query: 307 TWNGQKPLSL-DGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPS 355
           +W G K + +  G TR FL DGDEV  TG C+G+GY VGFG C+GK++P+
Sbjct: 366 SWKGTKAIDVGQGQTRTFLLDGDEVIITGHCQGDGYRVGFGQCAGKVLPA 415
>pdb|1QCO|A Chain A, Crystal Structure Of Fumarylacetoacetate Hydrolase Complexed With Fumarate And Acetoacetate Length = 423 Back     alignment and structure
>pdb|1HYO|A Chain A, Crystal Structure Of Fumarylacetoacetate Hydrolase Complexed With 4-(Hydroxymethylphosphinoyl)-3-Oxo-Butanoic Acid Length = 421 Back     alignment and structure
>pdb|1QCN|A Chain A, Crystal Structure Of Fumarylacetoacetate Hydrolase Length = 421 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query357
1hyo_A421 Fumarylacetoacetate hydrolase; beta-sandwich roll; 1e-156
3lzk_A359 Fumarylacetoacetate hydrolase family protein; stru 6e-35
3r6o_A329 2-hydroxyhepta-2,4-diene-1, 7-dioateisomerase; ssg 2e-19
1wzo_A246 HPCE; structural genomics, riken structural genomi 8e-15
3rr6_A265 Putative uncharacterized protein; structural genom 8e-15
1gtt_A429 4-hydroxyphenylacetate degradation bifunctional is 2e-14
1gtt_A 429 4-hydroxyphenylacetate degradation bifunctional is 7e-13
2dfu_A264 Probable 2-hydroxyhepta-2,4-diene-1,7-dioate ISOM; 3e-14
1saw_A225 Hypothetical protein FLJ36880; structural genomics 4e-14
3l53_A224 Putative fumarylacetoacetate isomerase/hydrolase; 1e-13
3s52_A221 Putative fumarylacetoacetate hydrolase family Pro; 2e-13
2q18_X293 2-keto-3-deoxy-D-arabinonate dehydratase; FAH-fami 2e-13
1nkq_A259 Hypothetical 28.8 kDa protein in PSD1-SKO1 interge 5e-11
>1hyo_A Fumarylacetoacetate hydrolase; beta-sandwich roll; HET: HBU; 1.30A {Mus musculus} SCOP: b.34.8.1 d.177.1.1 PDB: 1qcn_A 2hzy_A* 1qco_A 1qqj_A Length = 421 Back     alignment and structure
 Score =  444 bits (1143), Expect = e-156
 Identities = 204/352 (57%), Positives = 256/352 (72%), Gaps = 1/352 (0%)

Query: 5   QPNLNKFLSLGRPAWKEARDMLQKLLSSNEATLRDNANLRQKSLVPMGKVEMLLPMEIGD 64
           +  LN F+ LG+ AWKEAR  LQ LLS+++A LRD+  LRQ++        M LP  IGD
Sbjct: 66  ETTLNNFMGLGQAAWKEARASLQNLLSASQARLRDDKELRQRAFTSQASATMHLPATIGD 125

Query: 65  YTDFFSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPS 124
           YTDF+SS  HA N G +FRG  NA+  NW HLP+ YHGRASS+V+SGT I RP GQ  P 
Sbjct: 126 YTDFYSSRQHATNVGIMFRGKENALLPNWLHLPVGYHGRASSIVVSGTPIRRPMGQMRPD 185

Query: 125 GNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWE 184
            + PP +G  + LD ELEMA  VGPGN  G+PI +++A +HIFG++LMNDWSARDIQ WE
Sbjct: 186 NSKPPVYGACRLLDMELEMAFFVGPGNRFGEPIPISKAHEHIFGMVLMNDWSARDIQQWE 245

Query: 185 YVPLGPFLGKSFGTTLSPWIVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQI 244
           YVPLGPFLGKSFGTT+SPW+V +DAL PF   +PKQDP+PLPYL       +DI+L V +
Sbjct: 246 YVPLGPFLGKSFGTTISPWVVPMDALMPFVVPNPKQDPKPLPYLCHSQPYTFDINLSVSL 305

Query: 245 KPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTINGCNLRSGDLLGTGTISGPEPESLGCLL 304
           K  G   +  + RSNFK++YWT+ QQL HH++NGCNLR GDLL +GTISG +PES G +L
Sbjct: 306 KGEGMSQAATICRSNFKHMYWTMLQQLTHHSVNGCNLRPGDLLASGTISGSDPESFGSML 365

Query: 305 ELTWNGQKPLSL-DGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPS 355
           EL+W G K + +  G TR FL DGDEV  TG C+G+GY VGFG C+GK++P+
Sbjct: 366 ELSWKGTKAIDVGQGQTRTFLLDGDEVIITGHCQGDGYRVGFGQCAGKVLPA 417
>3lzk_A Fumarylacetoacetate hydrolase family protein; structural genomics, PSI-2, protein structure initiative; 1.90A {Sinorhizobium meliloti} Length = 359 Back     alignment and structure
>3r6o_A 2-hydroxyhepta-2,4-diene-1, 7-dioateisomerase; ssgcid, struc genomics, seattle structural genomics center for infectious isomerase; 1.95A {Mycobacterium abscessus} Length = 329 Back     alignment and structure
>1wzo_A HPCE; structural genomics, riken structural genomics/proteom initiative, RSGI, NPPSFA, isomerase; 1.90A {Thermus thermophilus} Length = 246 Back     alignment and structure
>3rr6_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.58A {Mycobacterium abscessus} PDB: 3qdf_A Length = 265 Back     alignment and structure
>1gtt_A 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase; lyase, bifunctional enzyme, multifunctional enzyme decarboxylase; 1.7A {Escherichia coli} SCOP: d.177.1.1 d.177.1.1 PDB: 1i7o_A Length = 429 Back     alignment and structure
>1gtt_A 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase; lyase, bifunctional enzyme, multifunctional enzyme decarboxylase; 1.7A {Escherichia coli} SCOP: d.177.1.1 d.177.1.1 PDB: 1i7o_A Length = 429 Back     alignment and structure
>2dfu_A Probable 2-hydroxyhepta-2,4-diene-1,7-dioate ISOM; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase, structural GE NPPSFA; 2.20A {Thermus thermophilus} Length = 264 Back     alignment and structure
>1saw_A Hypothetical protein FLJ36880; structural genomics, fumarylacetoacetatehydrolase family, unknown function; 2.20A {Homo sapiens} SCOP: d.177.1.1 Length = 225 Back     alignment and structure
>3s52_A Putative fumarylacetoacetate hydrolase family Pro; csgid, structural genomics, center for structural genomics O infectious diseases; 2.01A {Yersinia pestis} PDB: 1nr9_A Length = 221 Back     alignment and structure
>2q18_X 2-keto-3-deoxy-D-arabinonate dehydratase; FAH-family fold, lyase; 2.10A {Sulfolobus solfataricus} PDB: 2q19_X 2q1a_X 2q1c_X 2q1d_X 3bqb_A Length = 293 Back     alignment and structure
>1nkq_A Hypothetical 28.8 kDa protein in PSD1-SKO1 intergenic region; dimer, PSI, protein structure initiative; 2.20A {Saccharomyces cerevisiae} SCOP: d.177.1.1 Length = 259 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query357
1hyo_A421 Fumarylacetoacetate hydrolase; beta-sandwich roll; 100.0
3lzk_A359 Fumarylacetoacetate hydrolase family protein; stru 100.0
3r6o_A329 2-hydroxyhepta-2,4-diene-1, 7-dioateisomerase; ssg 100.0
4dbf_A288 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; oxa 100.0
3rr6_A265 Putative uncharacterized protein; structural genom 100.0
2dfu_A264 Probable 2-hydroxyhepta-2,4-diene-1,7-dioate ISOM; 100.0
3l53_A224 Putative fumarylacetoacetate isomerase/hydrolase; 100.0
1wzo_A246 HPCE; structural genomics, riken structural genomi 100.0
3s52_A221 Putative fumarylacetoacetate hydrolase family Pro; 100.0
1saw_A225 Hypothetical protein FLJ36880; structural genomics 100.0
1gtt_A429 4-hydroxyphenylacetate degradation bifunctional is 100.0
2q18_X293 2-keto-3-deoxy-D-arabinonate dehydratase; FAH-fami 100.0
1nkq_A259 Hypothetical 28.8 kDa protein in PSD1-SKO1 interge 100.0
1gtt_A 429 4-hydroxyphenylacetate degradation bifunctional is 100.0
2eb4_A267 2-OXO-HEPT-3-ENE-1,7-dioate hydratase; lyase; 1.60 100.0
2wqt_A270 2-keto-4-pentenoate hydratase; lyase, dodecahedral 100.0
>1hyo_A Fumarylacetoacetate hydrolase; beta-sandwich roll; HET: HBU; 1.30A {Mus musculus} SCOP: b.34.8.1 d.177.1.1 PDB: 1qcn_A 2hzy_A* 1qco_A 1qqj_A Back     alignment and structure
Probab=100.00  E-value=5.1e-75  Score=583.27  Aligned_cols=355  Identities=57%  Similarity=1.078  Sum_probs=313.6

Q ss_pred             cCcccHHHHHhCCchHHHHHHHHHHHHHhcCchhhhhhhhhccCccccCCCceecCCeeccccccccccHHHHHHhcccc
Q 018339            3 SWQPNLNKFLSLGRPAWKEARDMLQKLLSSNEATLRDNANLRQKSLVPMGKVEMLLPMEIGDYTDFFSSMHHAKNCGTIF   82 (357)
Q Consensus         3 ~~~~~l~~f~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ll~P~~~~~~~~~~~~~~H~~~~g~~~   82 (357)
                      |.+++|+.|++.|++.|..+|..++.+++...+.|+++..+.....+++++|+|++|+.+++|++|++|.+|++|+++.+
T Consensus        64 ~~~~tL~~~l~~g~~~~~~~r~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~v~ll~P~~~~~y~df~~~~~Ha~~~g~~~  143 (421)
T 1hyo_A           64 FDETTLNNFMGLGQAAWKEARASLQNLLSASQARLRDDKELRQRAFTSQASATMHLPATIGDYTDFYSSRQHATNVGIMF  143 (421)
T ss_dssp             GGSSSSHHHHHHCHHHHHHHHHHHHHHHTTSSTHHHHCHHHHHHHEEESTTCEEECSSCCSCEEEECCCHHHHHHHHHHH
T ss_pred             cCCcCHHHHHhcChHHHHHHHHHHHHHhhccCccccccccccccccccHhHCeEcCCcccCcEEEEechHHHHHHHHhhh
Confidence            67899999999999999999999998877544444444333344568999999999999999999999999999999877


Q ss_pred             CCCCCCCCCCCCCCceeeecCCcceecCCCeeecCCCCCCCCCCCCCCCCCCCCceeceEEEEEEcCCCCCCCCCCHHHH
Q 018339           83 RGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPSGNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEA  162 (357)
Q Consensus        83 ~~~~~~~~p~~~~~P~~f~k~~ssv~~~g~~I~~P~~~~~~~~~~~~~~~~~~~ld~E~ELavVIgk~~~~g~~i~~e~A  162 (357)
                      +++.++.+|+|.+.|++|+|+++|++++|++|.+|.+++.+.+...|.+.++.++|||+||||||||+++.|++|++++|
T Consensus       144 r~~~~~~~p~~~~~Pv~f~k~~ssvv~~g~~I~~P~~~~~~~~~~~p~~~~s~~lD~E~ELavvIG~~~~~g~~v~~~~A  223 (421)
T 1hyo_A          144 RGKENALLPNWLHLPVGYHGRASSIVVSGTPIRRPMGQMRPDNSKPPVYGACRLLDMELEMAFFVGPGNRFGEPIPISKA  223 (421)
T ss_dssp             HCGGGCSCTTTTTSCCEEECCSTTEEETTCCEECCEEEECSCTTSCCEEEECSCEECBEEEEEEECSCCCTTCCCCHHHH
T ss_pred             ccccccCCCCcCCCCEEEEcccceEEcCCCeEECCCCcccCccccccccccccCceEEEEEEEEECcccccCCCCCHHHH
Confidence            66666678899999999999999999999999999876544444446666789999999999999999777899999999


Q ss_pred             hhceeEEEEeecCchhhhhhhhhcCCCCcccccCCCccCCccccccccCCccCCCCCCCCCCCccccccCCcceeEEEEE
Q 018339          163 ADHIFGVMLMNDWSARDIQAWEYVPLGPFLGKSFGTTLSPWIVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEV  242 (357)
Q Consensus       163 ~~~I~Gy~l~nD~saRd~q~~~~~~l~~~~aK~fdt~lGP~ivt~d~l~~~~~~~~~~~~~~~~~~~~~~~~~l~i~l~v  242 (357)
                      ++||+||+++||||+||+|.|++.+++|+++|+|+|++||||||.|++++++...+++||+.++||.++++..+.|.|++
T Consensus       224 ~~~I~Gy~l~ND~SaRdiQ~~e~~plg~~~aK~f~t~iGPwivt~d~l~p~~~~~~~~~~~~l~~l~~~~~~~~~l~l~~  303 (421)
T 1hyo_A          224 HEHIFGMVLMNDWSARDIQQWEYVPLGPFLGKSFGTTISPWVVPMDALMPFVVPNPKQDPKPLPYLCHSQPYTFDINLSV  303 (421)
T ss_dssp             GGGEEEEEEEECCEEHHHHHHHCTTTCCCHHHHTCEEECSCBEEHHHHGGGEECCCCCSSCCCGGGCCCSCCEECCEEEE
T ss_pred             HHhhcEEEEEEeccHHhhhhhhcccCCCccccCcCCCCCCeecchhhcccccccccccCCcccccccccCCCccceEEEE
Confidence            99999999999999999999998889999999999999999999999999998889999999999998877766777777


Q ss_pred             EEeeCCCCCCeEEEecchhhhhcCHHHHHHHHHHcCcccCCCCEEEcCCCCCCccCCCCceEEEEecCcccccc-CCCCC
Q 018339          243 QIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTINGCNLRSGDLLGTGTISGPEPESLGCLLELTWNGQKPLSL-DGFTR  321 (357)
Q Consensus       243 ~i~~~~~~NGe~~q~~~t~~M~~~~~~lIa~~~S~~~tL~pGDvI~TGTp~Gv~~~~~G~~~e~~i~g~~~l~~-~~~~~  321 (357)
                      ++|.+.+.||+++|++++++|+|++++||+|++|++++|+|||||+||||+|+++.+.||.+|++++|++++++ .+.++
T Consensus       304 ~vN~~~~~~Ge~~q~~~~~~m~~~~~~lIa~lss~g~tL~pGDlI~TGTpsG~~~~~~G~~lE~~~~G~~~v~l~~g~~~  383 (421)
T 1hyo_A          304 SLKGEGMSQAATICRSNFKHMYWTMLQQLTHHSVNGCNLRPGDLLASGTISGSDPESFGSMLELSWKGTKAIDVGQGQTR  383 (421)
T ss_dssp             EEECTTCSSCEEEEEEETTCCSSCHHHHHHHHHTTSCCCCTTCEEECCCCCCSSGGGCCBHHHHTTTTTSCEECSTTCEE
T ss_pred             EEecCCCCCCEEEEecCHHhhcCCHHHHHHHHHHCCCccCCCCEEEcCCCCCCCCCCCcceEEEEecCcceeeccCCCCC
Confidence            66322222399999999999999999999998668999999999999999999999999999999999999988 56678


Q ss_pred             cCCCCCCEEEEEEEEeCCCceeeeeeeeeeEeeCCC
Q 018339          322 KFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPSTP  357 (357)
Q Consensus       322 ~~L~~GD~V~~~~~~~~~~~~~~~G~~~~~v~~~~~  357 (357)
                      +|||+||+|++++.+..||++||||+|+|+|+++.+
T Consensus       384 ~fL~~GD~V~~~~~~~~~g~~igfG~~~~~V~~a~~  419 (421)
T 1hyo_A          384 TFLLDGDEVIITGHCQGDGYRVGFGQCAGKVLPALS  419 (421)
T ss_dssp             SSCCTTCEEEEEEEEECSSCEEEEEEEEEEEECCC-
T ss_pred             ccCCCCCEEEEEEEECCCCceeeeeeeEEEEecCCC
Confidence            999999999999888789999999999999999853
>3lzk_A Fumarylacetoacetate hydrolase family protein; structural genomics, PSI-2, protein structure initiative; 1.90A {Sinorhizobium meliloti} Back     alignment and structure
>3r6o_A 2-hydroxyhepta-2,4-diene-1, 7-dioateisomerase; ssgcid, struc genomics, seattle structural genomics center for infectious isomerase; 1.95A {Mycobacterium abscessus} Back     alignment and structure
>4dbf_A 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; oxaloacetate decarboxylase; 1.90A {Corynebacterium glutamicum} PDB: 4dbh_A Back     alignment and structure
>3rr6_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.58A {Mycobacterium abscessus} PDB: 3qdf_A Back     alignment and structure
>2dfu_A Probable 2-hydroxyhepta-2,4-diene-1,7-dioate ISOM; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase, structural GE NPPSFA; 2.20A {Thermus thermophilus} Back     alignment and structure
>1wzo_A HPCE; structural genomics, riken structural genomics/proteom initiative, RSGI, NPPSFA, isomerase; 1.90A {Thermus thermophilus} Back     alignment and structure
>3s52_A Putative fumarylacetoacetate hydrolase family Pro; csgid, structural genomics, center for structural genomics O infectious diseases; 2.01A {Yersinia pestis} SCOP: d.177.1.1 PDB: 1nr9_A Back     alignment and structure
>1saw_A Hypothetical protein FLJ36880; structural genomics, fumarylacetoacetatehydrolase family, unknown function; 2.20A {Homo sapiens} SCOP: d.177.1.1 Back     alignment and structure
>1gtt_A 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase; lyase, bifunctional enzyme, multifunctional enzyme decarboxylase; 1.7A {Escherichia coli} SCOP: d.177.1.1 d.177.1.1 PDB: 1i7o_A Back     alignment and structure
>2q18_X 2-keto-3-deoxy-D-arabinonate dehydratase; FAH-family fold, lyase; 2.10A {Sulfolobus solfataricus} PDB: 2q19_X 2q1a_X 2q1c_X 2q1d_X 3bqb_A Back     alignment and structure
>1nkq_A Hypothetical 28.8 kDa protein in PSD1-SKO1 intergenic region; dimer, PSI, protein structure initiative; 2.20A {Saccharomyces cerevisiae} SCOP: d.177.1.1 Back     alignment and structure
>1gtt_A 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase; lyase, bifunctional enzyme, multifunctional enzyme decarboxylase; 1.7A {Escherichia coli} SCOP: d.177.1.1 d.177.1.1 PDB: 1i7o_A Back     alignment and structure
>2eb4_A 2-OXO-HEPT-3-ENE-1,7-dioate hydratase; lyase; 1.60A {Escherichia coli} PDB: 2eb5_A 2eb6_A Back     alignment and structure
>2wqt_A 2-keto-4-pentenoate hydratase; lyase, dodecahedral form, aromatic hydrocarbons catabolism; 2.80A {Escherichia coli} PDB: 1sv6_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 357
d1hyoa2298 d.177.1.1 (A:119-416) Fumarylacetoacetate hydrolas 1e-116
d1hyoa1118 b.34.8.1 (A:1-118) Fumarylacetoacetate hydrolase, 1e-16
d1nkqa_257 d.177.1.1 (A:) Hypothetical protein Ynl168c {Baker 2e-15
d1sawa_217 d.177.1.1 (A:) FAHD1 (Flj36880, YISKL) {Human (Hom 3e-07
d1gtta2216 d.177.1.1 (A:214-429) 4-hydroxyphenylacetate degra 1e-04
>d1hyoa2 d.177.1.1 (A:119-416) Fumarylacetoacetate hydrolase, FAH, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 298 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: FAH
superfamily: FAH
family: FAH
domain: Fumarylacetoacetate hydrolase, FAH, C-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  336 bits (862), Expect = e-116
 Identities = 178/295 (60%), Positives = 221/295 (74%), Gaps = 1/295 (0%)

Query: 62  IGDYTDFFSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQF 121
           IGDYTDF+SS  HA N G +FRG  NA+  NW HLP+ YHGRASS+V+SGT I RP GQ 
Sbjct: 3   IGDYTDFYSSRQHATNVGIMFRGKENALLPNWLHLPVGYHGRASSIVVSGTPIRRPMGQM 62

Query: 122 APSGNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQ 181
            P  + PP +G  + LD ELEMA  VGPGN  G+PI +++A +HIFG++LMNDWSARDIQ
Sbjct: 63  RPDNSKPPVYGACRLLDMELEMAFFVGPGNRFGEPIPISKAHEHIFGMVLMNDWSARDIQ 122

Query: 182 AWEYVPLGPFLGKSFGTTLSPWIVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLE 241
            WEYVPLGPFLGKSFGTT+SPW+V +DAL PF   +PKQDP+PLPYL       +DI+L 
Sbjct: 123 QWEYVPLGPFLGKSFGTTISPWVVPMDALMPFVVPNPKQDPKPLPYLCHSQPYTFDINLS 182

Query: 242 VQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTINGCNLRSGDLLGTGTISGPEPESLG 301
           V +K  G   +  + RSNFK++YWT+ QQL HH++NGCNLR GDLL +GTISG +PES G
Sbjct: 183 VSLKGEGMSQAATICRSNFKHMYWTMLQQLTHHSVNGCNLRPGDLLASGTISGSDPESFG 242

Query: 302 CLLELTWNGQKPLSL-DGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPS 355
            +LEL+W G K + +  G TR FL DGDEV  TG C+G+GY VGFG C+GK++P+
Sbjct: 243 SMLELSWKGTKAIDVGQGQTRTFLLDGDEVIITGHCQGDGYRVGFGQCAGKVLPA 297
>d1hyoa1 b.34.8.1 (A:1-118) Fumarylacetoacetate hydrolase, FAH, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 118 Back     information, alignment and structure
>d1nkqa_ d.177.1.1 (A:) Hypothetical protein Ynl168c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 257 Back     information, alignment and structure
>d1sawa_ d.177.1.1 (A:) FAHD1 (Flj36880, YISKL) {Human (Homo sapiens) [TaxId: 9606]} Length = 217 Back     information, alignment and structure
>d1gtta2 d.177.1.1 (A:214-429) 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase HpcE {Escherichia coli [TaxId: 562]} Length = 216 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query357
d1hyoa2298 Fumarylacetoacetate hydrolase, FAH, C-terminal dom 100.0
d1nr9a_221 Putative isomerase YcgM {Escherichia coli [TaxId: 100.0
d1sawa_217 FAHD1 (Flj36880, YISKL) {Human (Homo sapiens) [Tax 100.0
d1gtta1213 4-hydroxyphenylacetate degradation bifunctional is 100.0
d1gtta2216 4-hydroxyphenylacetate degradation bifunctional is 100.0
d1nkqa_257 Hypothetical protein Ynl168c {Baker's yeast (Sacch 100.0
d1sv6a_261 2-keto-4-pentenoate hydratase MhpD {Escherichia co 99.77
d1hyoa1118 Fumarylacetoacetate hydrolase, FAH, N-terminal dom 97.9
>d1hyoa2 d.177.1.1 (A:119-416) Fumarylacetoacetate hydrolase, FAH, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: FAH
superfamily: FAH
family: FAH
domain: Fumarylacetoacetate hydrolase, FAH, C-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=7.2e-73  Score=543.11  Aligned_cols=294  Identities=61%  Similarity=1.162  Sum_probs=273.1

Q ss_pred             ccccccccccHHHHHHhccccCCCCCCCCCCCCCCceeeecCCcceecCCCeeecCCCCCCCCCCCCCCCCCCCCceece
Q 018339           62 IGDYTDFFSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPSGNSPPPFGPSQKLDFEL  141 (357)
Q Consensus        62 ~~~~~~~~~~~~H~~~~g~~~~~~~~~~~p~~~~~P~~f~k~~ssv~~~g~~I~~P~~~~~~~~~~~~~~~~~~~ld~E~  141 (357)
                      ..+|++|+||+||++++++.|++..++.+|.|++.|++|+|++||++++|++|.+|.+++...++..|.+++++++|||+
T Consensus         3 ~~~~~Df~~~~~Ha~~~~~~~r~~~~~lpp~~~~~Pv~f~~~~ssivg~g~~I~~P~g~~~~~~~~~p~~~~s~~lDyE~   82 (298)
T d1hyoa2           3 IGDYTDFYSSRQHATNVGIMFRGKENALLPNWLHLPVGYHGRASSIVVSGTPIRRPMGQMRPDNSKPPVYGACRLLDMEL   82 (298)
T ss_dssp             CSCEEEECCCHHHHHHHHHHHHCGGGCSCTTTTTSCCEEECCSTTEEETTCCEECCEEEECSCTTSCCEEEECSCEECBE
T ss_pred             ccccceeccHHHHHHHHHHhhcCCCCCCCcccccCCCEEcCCCCeEECCCCCEeCCCcceecCccCCCccCcccceeeec
Confidence            35789999999999999998887777889999999999999999999999999999876544444456777799999999


Q ss_pred             EEEEEEcCCCCCCCCCCHHHHhhceeEEEEeecCchhhhhhhhhcCCCCcccccCCCccCCccccccccCCccCCCCCCC
Q 018339          142 EMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYVPLGPFLGKSFGTTLSPWIVTLDALEPFACDSPKQD  221 (357)
Q Consensus       142 ELavVIgk~~~~g~~i~~e~A~~~I~Gy~l~nD~saRd~q~~~~~~l~~~~aK~fdt~lGP~ivt~d~l~~~~~~~~~~~  221 (357)
                      ||++||||+++.|++|++++|++||+|||++||||+||+|..++.+++|+++|+|++++|||+||++++.++....+.++
T Consensus        83 EL~vVIG~~~~~g~~i~~e~A~d~I~Gyti~NDvSaRd~Q~~~~~~~~~~~gK~f~tpiGP~ivt~~~l~p~~~~~~~~d  162 (298)
T d1hyoa2          83 EMAFFVGPGNRFGEPIPISKAHEHIFGMVLMNDWSARDIQQWEYVPLGPFLGKSFGTTISPWVVPMDALMPFVVPNPKQD  162 (298)
T ss_dssp             EEEEEECSCCCTTCCCCHHHHGGGEEEEEEEECCEEHHHHHHHCTTTCCCHHHHTCEEECSCBEEHHHHGGGEECCCCCS
T ss_pred             eEEEEEecccccCccCCHHHHHHHHHHHhhhhhhhHHHHHHhhccCCCcccccCCCCCCCCeEccchhcCcccccccccC
Confidence            99999999877799999999999999999999999999999988788999999999999999999999998888778888


Q ss_pred             CCCCccccccCCcceeEEEEEEEeeCCCCCCeEEEecchhhhhcCHHHHHHHHHHcCcccCCCCEEEcCCCCCCccCCCC
Q 018339          222 PQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTINGCNLRSGDLLGTGTISGPEPESLG  301 (357)
Q Consensus       222 ~~~~~~~~~~~~~~l~i~l~v~i~~~~~~NGe~~q~~~t~~M~~~~~~lIa~~~S~~~tL~pGDvI~TGTp~Gv~~~~~G  301 (357)
                      |+.++++.+.++....+.|++++|++.++||+++|++++++|+|+++|+|+|++|+++||+|||||+||||+|+++++.|
T Consensus       163 p~~~~~~~~~~~~~~dl~l~~~lng~~~~ng~~~q~~nt~dMif~~~e~Ia~~~S~~~tL~pGDlI~TGTP~G~~~~~~G  242 (298)
T d1hyoa2         163 PKPLPYLCHSQPYTFDINLSVSLKGEGMSQAATICRSNFKHMYWTMLQQLTHHSVNGCNLRPGDLLASGTISGSDPESFG  242 (298)
T ss_dssp             SCCCGGGCCCSCCEECCEEEEEEECTTCSSCEEEEEEETTCCSSCHHHHHHHHHTTSCCCCTTCEEECCCCCCSSGGGCC
T ss_pred             ccccccccccCCCCccceEEEEEEEEEeecCeEEecCcHHhcCCCHHHHHHHHHhCceeechhhEEEecCCCCCCCCCCC
Confidence            88889999999999999999999999999999999999999999999999997689999999999999999999999999


Q ss_pred             ceEEEEecCcccccc-CCCCCcCCCCCCEEEEEEEEeCCCceeeeeeeeeeEeeC
Q 018339          302 CLLELTWNGQKPLSL-DGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPS  355 (357)
Q Consensus       302 ~~~e~~i~g~~~l~~-~~~~~~~L~~GD~V~~~~~~~~~~~~~~~G~~~~~v~~~  355 (357)
                      |.+|++++|+.++++ .+++++|||+||+|++|+++..+|.+||||+|+|+|+|+
T Consensus       243 d~le~~~~G~~~i~~~~g~~~~~L~~GD~V~ie~~~~~~g~~igfG~~~~~v~pa  297 (298)
T d1hyoa2         243 SMLELSWKGTKAIDVGQGQTRTFLLDGDEVIITGHCQGDGYRVGFGQCAGKVLPA  297 (298)
T ss_dssp             BHHHHTTTTTSCEECSTTCEESSCCTTCEEEEEEEEECSSCEEEEEEEEEEEECC
T ss_pred             cEEEEEecccceeecCCCCCcccCCCCCEEEEEEEEcCCCceEeccceEEEEecC
Confidence            999999999999998 566778999999999999999999999999999999997
>d1nr9a_ d.177.1.1 (A:) Putative isomerase YcgM {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1sawa_ d.177.1.1 (A:) FAHD1 (Flj36880, YISKL) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gtta1 d.177.1.1 (A:1-213) 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase HpcE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gtta2 d.177.1.1 (A:214-429) 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase HpcE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1nkqa_ d.177.1.1 (A:) Hypothetical protein Ynl168c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1sv6a_ d.177.1.1 (A:) 2-keto-4-pentenoate hydratase MhpD {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1hyoa1 b.34.8.1 (A:1-118) Fumarylacetoacetate hydrolase, FAH, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure