Citrus Sinensis ID: 018357

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------
Protein Sequence
MFQKGTTIGSSLGSGHIENWGESGIGDNSQQTDTSTDVDTDDKNQVNGVRRGVPIVTGSMEQSKIKTGDQKALRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQRARQQGIFIATGVSGDIGHSVAGNGVLAFDLDYVHWVDEHQRLINDLRSAVNSSMGDNELRHLVDGVMAHYEEVFQLKSIGTKADVFHMLSGMWKTPVERCFMWLGGFRSSELLKVIGNHLEPLTDQQLMGICNLQQSSQQAEDALSQGMEALQQSLVDTLSASSLGPTSSGNVADYMGQMALAMGKLATLENFIHQADLLRQQTLQQMHRILTARQAARALLVINDYTSRLRALSSLWLARPRG
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHcccccccHHHHHHHHHcccccHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcHHHHcccc
Secondary Structure Prediction (SSPRO)
ccccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEccccccccccccccccEEEEHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHEHHHHcccccHHHHHHHHHccccHHHHHHHHHHHccHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
mfqkgttigsslgsghienwgesgigdnsqqtdtstdvdtddknqvngvrrgvpivtgsmeqskiktgDQKALRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQRARQQGIFIatgvsgdighsvagngvlafdldyvhWVDEHQRLINDLRSAvnssmgdneLRHLVDGVMAHYEEVFQLKSIGTKADVFHMLSGMWKTPVERCFMwlggfrssELLKVIGnhlepltdqqLMGICNLQQSSQQAEDALSQGMEALQQSLVDTlsasslgptssgnvaDYMGQMALAMGKLATLENFIHQADLLRQQTLQQMHRILTARQAARALLVINDYTSRLRALSSLWLARPRG
Flexible Loop (DISEMBL)
mfqkgttigsslgsghIENWGESGIGDNSQQTDTStdvdtddknqvngvrrgvpivtgsmeqskiktgdqkaLRRLAQNREaarksrlrkkAYVQQLENSRLRLAQLEQELQRARQQGIFIATGVSGDIGHSVAGNGVLAFDLDYVHWVDEHQRLINDLRSAVNSSMGDNELRHLVDGVMAHYEEVFQLKSIGTKADVFHMLSGMWKTPVERCFMWLGGFRSSELLKVIGNHLEPLTDQQLMGICNLQQSSQQAEDALSQGMEALQQSLVDTLSASSLGPTSSGNVADYMGQMALAMGKLATLENFIHQADLLRQQTLQQMHRILTARQAARALLVINDYTSRLralsslwlarprg
Low Complexity Region (SEG)
MFQKGTTIGSSLGSGHIENWGESGIGdnsqqtdtstdvdtddKNQVNGVRRGVPIVTGSMEQSKIKTGDQKALRRLAQNREAARKSRLRKKAYVQQLENSrlrlaqleqelqrarqqGIFIATGVSGDIGHSVAGNGVLAFDLDYVHWVDEHQRLINDLRSAVNSSMGDNELRHLVDGVMAHYEEVFQLKSIGTKADVFHMLSGMWKTPVERCFMWLGGFRSSELLKVIGNHLEPLTDQQLMGICNLQQSSQQAEDALSQGMEALQQSLVDTLSASSLGPTSSGNVADYMGQMALAMGKLATLENFIHQADLLRQQTLQQMHRILTARQAARALLVINDYTsrlralsslwlarprG
Disordered region (IsUnstruct)
*****************************************************************************************************************ARQQGIFIATGVSGDIGHSVAGNGVLAFDLDYVHWVDEHQRLINDLRSAVNSSMGDNELRHLVDGVMAHYEEVFQLKSIGTKADVFHMLSGMWKTPVERCFMWLGGFRSSELLKVIGNHLEPLTDQQLMGICNL**************************************VADYMGQMALAMGKLATLENFIHQADLLRQQTLQQMHRILTARQAARALLVINDYTSRLRALSSLWL*****
Disordered Region (DISOPRED)
********************************************************************************************YVQQLENSRLR********************************NGVLAFDLDYVHWVDEHQRLINDLR*********NELRHLVDGVMAHYEEVFQLKSIGTKADVFHMLSGMWKTPVERCFMWLGGFRSSELLKVIGNHLEPLTDQQLMGICN******************LQQSLVDTLS****************GQMALAMGKLATLENFIHQADLLRQQTLQQMHRILTARQAARALLVINDYTSRLRALSSLWLARP**
Disordered Region (DISEMBL)
MFQKGTTIGSSLGSGHIENWGESGIG****************KNQVNGVRRGVPIVTGSMEQSKIKTGDQKALRRLA************KKAYVQQLENSRLRLAQLEQELQRARQQGIFIATGVSGDIGHSVAGNGVLAFDLDYVHWVDEHQRLINDLRSAVNSSMGDNELRHLVDGVMAHYEEVFQLKSIGTKADVFHMLSGMWKTPVERCFMWLGGFRSSELLKVIGNHLEPLTDQQLMGICNLQQ**********QGMEALQQSLVDTLSASSLGPTSSGNVADYMGQMALAMGKLATLENFIHQADLLRQQTLQQMHRILTARQAARALLVINDYTSRLRALSSLWLARPRG
Disordered Region (DISPRO)
****GTTIGSSLGSG****************************************************GDQKALRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQRARQQGIFIATGVS*D*****AGNGVLAFDLDYVHWVDEHQRLINDLRSAVNSSMGDNELRHLVDGVMAHYEEVFQLKSIGTKADVFHMLSGMWKTPVERCFMWLGGFRSSELLKVIGNHLEPLTDQQLMGICNLQQSSQQAEDALSQGMEALQQSLVDTLSASSLG**SSGNVADYMGQMALAMGKLATLENFIHQADLLRQQTLQQMHRILTARQAARALLVINDYTSRLRALSSLWLAR***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MFQKGTTIGSSLGSGHIENWGESGIGDNSQQTDTSTDVDTDDKNQVNGVRRGVPIVTGSMEQSKIKTGDQKALRRLAQNREAARKSRLRxxxxxxxxxxxxxxxxxxxxxxxxxxxxGIFIATGVSGDIGHSVAGNGVLAFDLDYVHWVDEHQRLINDLRSAVNSSMGDNELRHLVDGVMAHYEEVFQLKSIGTKADVFHMLSGMWKTPVERCFMWLGGFRSSELLKVIGNHLEPLTDQQLMGICNLQQSSQQAEDALSQGMEALQQSLVDTLSASSLGPTSSGNVADYMGQMALAMGKLATLENFIHQADLLRQQTLQQMHRILTARQAARALLVINDYTSRLRALSSLWLARPRG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	357	2.2.26 [Sep-21-2011]
Q9SX27	452	Transcription factor PERI	yes	no	0.994	0.785	0.721	1e-136
Q41558	476	Transcription factor HBP-	N/A	no	0.941	0.705	0.679	1e-132
O24160	456	TGACG-sequence-specific D	N/A	no	0.927	0.725	0.676	1e-129
P23923	332	Transcription factor HBP-	N/A	no	0.921	0.990	0.679	1e-127
Q39140	330	Transcription factor TGA6	no	no	0.915	0.990	0.685	1e-121
P43273	330	Transcription factor TGA2	no	no	0.848	0.918	0.710	1e-117
Q39163	330	Transcription factor TGA5	no	no	0.918	0.993	0.654	1e-112
Q39162	364	Transcription factor TGA4	no	no	0.781	0.766	0.577	5e-90
Q39237	368	Transcription factor TGA1	no	no	0.943	0.915	0.505	1e-87
Q39234	384	Transcription factor TGA3	no	no	0.862	0.802	0.528	7e-87

>sp|Q9SX27|PAN_ARATH Transcription factor PERIANTHIA OS=Arabidopsis thaliana GN=PAN PE=1 SV=1

 Score =  486 bits (1251), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 259/359 (72%), Positives = 305/359 (84%), Gaps = 4/359 (1%)

Query: 1   MFQKGT-TIGSSLGSGHIENWGES--GIGDNSQQTDTSTDVDTDDKNQVNGVRRGVPIVT 57
           ++QKGT  +G  +G  +  +W +S   + DNSQ TDTSTD+DTDDK Q+NG  +G+ + T
Sbjct: 94  VYQKGTRLVGGGVGEVN-SSWCDSVSAMADNSQHTDTSTDIDTDDKTQLNGGHQGMLLAT 152

Query: 58  GSMEQSKIKTGDQKALRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQRARQQ 117
              +QS +K+ DQ+ LRRLAQNREAARKSRLRKKAYVQQLENSR+RLAQLE+EL+RARQQ
Sbjct: 153 NCSDQSNVKSSDQRTLRRLAQNREAARKSRLRKKAYVQQLENSRIRLAQLEEELKRARQQ 212

Query: 118 GIFIATGVSGDIGHSVAGNGVLAFDLDYVHWVDEHQRLINDLRSAVNSSMGDNELRHLVD 177
           G  +  GVS D  H  AGNGV +F+L+Y  W +EHQR+INDLRS VNS +GDN+LR LVD
Sbjct: 213 GSLVERGVSADHTHLAAGNGVFSFELEYTRWKEEHQRMINDLRSGVNSQLGDNDLRVLVD 272

Query: 178 GVMAHYEEVFQLKSIGTKADVFHMLSGMWKTPVERCFMWLGGFRSSELLKVIGNHLEPLT 237
            VM+HY+E+F+LK IGTK DVFHMLSGMWKTP ER FMWLGGFRSSELLK++GNH++PLT
Sbjct: 273 AVMSHYDEIFRLKGIGTKVDVFHMLSGMWKTPAERFFMWLGGFRSSELLKILGNHVDPLT 332

Query: 238 DQQLMGICNLQQSSQQAEDALSQGMEALQQSLVDTLSASSLGPTSSGNVADYMGQMALAM 297
           DQQL+GICNLQQSSQQAEDALSQGMEALQQSL++TLS++S+GP SS NVADYMG MA+AM
Sbjct: 333 DQQLIGICNLQQSSQQAEDALSQGMEALQQSLLETLSSASMGPNSSANVADYMGHMAMAM 392

Query: 298 GKLATLENFIHQADLLRQQTLQQMHRILTARQAARALLVINDYTSRLRALSSLWLARPR 356
           GKL TLENF+ QADLLRQQTLQQ+HRILT RQAARA LVI+DY SRLRALSSLWLARPR
Sbjct: 393 GKLGTLENFLRQADLLRQQTLQQLHRILTTRQAARAFLVIHDYISRLRALSSLWLARPR 451

Transcriptional activator involved in the determination of floral organ number. Acts to determine floral organ patterning by establishing floral organ primordia in specific numbers and positions. Plays a role in regulating stem cell fate by directly controlling AG expression. Binds to the 5'-AAGAAT-3' cis-acting element found in AG promoter. Might represent a target for a post-translational modification by GRXC7/ROXY1.
Arabidopsis thaliana (taxid: 3702)

>sp|Q41558|HBP1C_WHEAT Transcription factor HBP-1b(c1) (Fragment) OS=Triticum aestivum PE=1 SV=2

 Score =  472 bits (1215), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 233/343 (67%), Positives = 280/343 (81%), Gaps = 7/343 (2%)

Query: 18  ENWGESGIGDNSQQTDTSTD--VDTDDKNQV-NGVRRGVPIVTGSMEQSKIKTGDQKALR 74
           +NWGES + D S +TDTSTD  +D D++NQ+    +   P  + S ++S+ K  D K+LR
Sbjct: 136 DNWGESSMADTSPRTDTSTDPDIDIDERNQMFEQGQLAAPTASDSSDKSRDKL-DHKSLR 194

Query: 75  RLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQRARQQGIFIATGVSGDIGHSVA 134
           RLAQNREAARKSRLRKKAY+Q LE+SRL+L QLEQELQRARQQGIFI++  SGD   S +
Sbjct: 195 RLAQNREAARKSRLRKKAYIQNLESSRLKLTQLEQELQRARQQGIFISS--SGDQSQSAS 252

Query: 135 GNGVLAFDLDYVHWVDEHQRLINDLRSAVNSSMGDNELRHLVDGVMAHYEEVFQLKSIGT 194
           GNG +AFD++Y  W++EH + IN+LR+A N+  GD++LR +VD +M+ Y+E F+LK +  
Sbjct: 253 GNGAVAFDMEYARWLEEHNKHINELRAAANAHAGDDDLRKIVDSIMSQYDEFFRLKGVAA 312

Query: 195 KADVFHMLSGMWKTPVERCFMWLGGFRSSELLKVIGNHLEPLTDQQLMGICNLQQSSQQA 254
           KADVFH+LSGMWKTP ERCFMWLGGFRSSELLK++   LEPLT+QQL GICNLQQSSQQA
Sbjct: 313 KADVFHVLSGMWKTPAERCFMWLGGFRSSELLKLLAGQLEPLTEQQLTGICNLQQSSQQA 372

Query: 255 EDALSQGMEALQQSLVDTLSASSLGPT-SSGNVADYMGQMALAMGKLATLENFIHQADLL 313
           EDALSQGMEALQQSL +TL++ SLGP  SSGNVA YMGQMA+AMGKL TLENF+ QAD L
Sbjct: 373 EDALSQGMEALQQSLAETLASGSLGPAGSSGNVASYMGQMAMAMGKLGTLENFLRQADNL 432

Query: 314 RQQTLQQMHRILTARQAARALLVINDYTSRLRALSSLWLARPR 356
           R QTLQQM RILT RQ+ARALL I+DY SRLRALSSLWLARPR
Sbjct: 433 RLQTLQQMQRILTTRQSARALLAISDYFSRLRALSSLWLARPR 475

Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.

Triticum aestivum (taxid: 4565)

>sp|O24160|TGA21_TOBAC TGACG-sequence-specific DNA-binding protein TGA-2.1 OS=Nicotiana tabacum GN=TGA21 PE=1 SV=1

 Score =  461 bits (1185), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 232/343 (67%), Positives = 272/343 (79%), Gaps = 12/343 (3%)

Query: 16  HIENWGESGIGDNSQQTDTSTDVDTDDKNQVNGVRRGVPIVTG-SMEQSKIKTGDQKALR 74
           H ENWGES + D+  +TDTSTD+D DDKNQ+        I  G S ++SK K  DQK LR
Sbjct: 120 HHENWGESNMADSGSRTDTSTDMDGDDKNQL--------IEAGQSSDKSKEKVLDQKTLR 171

Query: 75  RLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQRARQQGIFIATGVSGDIGHSVA 134
           RLAQNREAARKSRLRKKAYVQQLENSRL+L+QLEQ+LQRARQQG +I+     D  + V 
Sbjct: 172 RLAQNREAARKSRLRKKAYVQQLENSRLKLSQLEQDLQRARQQGKYISN--IADQSNGVG 229

Query: 135 GNGVLAFDLDYVHWVDEHQRLINDLRSAVNSSMGDNELRHLVDGVMAHYEEVFQLKSIGT 194
            NG LAFD +Y  W++EH + IN+LR+AVN+   D ELR +V+ V AH++EVF++K    
Sbjct: 230 ANGPLAFDAEYSRWLEEHNKHINELRTAVNAHASDPELRSIVNNVTAHFDEVFRVKGNAA 289

Query: 195 KADVFHMLSGMWKTPVERCFMWLGGFRSSELLKVIGNHLEPLTDQQLMGICNLQQSSQQA 254
           KADVFH+LSGMWKTP ERCFMW+GGFR SELLK++ N LEPLT+QQL GI NLQQSS QA
Sbjct: 290 KADVFHVLSGMWKTPAERCFMWIGGFRPSELLKLLVNQLEPLTEQQLAGIYNLQQSSHQA 349

Query: 255 EDALSQGMEALQQSLVDTLSASSLGPT-SSGNVADYMGQMALAMGKLATLENFIHQADLL 313
           EDALSQGMEALQQSL +TL+  S  P  SSG+VA+YMGQMA+AMGKL TLE F+ QAD L
Sbjct: 350 EDALSQGMEALQQSLAETLANGSPAPEGSSGDVANYMGQMAMAMGKLGTLEGFLRQADNL 409

Query: 314 RQQTLQQMHRILTARQAARALLVINDYTSRLRALSSLWLARPR 356
           RQQTLQQMHR+LT RQ+ARALL IN+Y SRLRALSSLWLARPR
Sbjct: 410 RQQTLQQMHRVLTTRQSARALLAINEYFSRLRALSSLWLARPR 452

Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.

Nicotiana tabacum (taxid: 4097)

>sp|P23923|HBP1B_WHEAT Transcription factor HBP-1b(c38) OS=Triticum aestivum PE=2 SV=1

 Score =  456 bits (1172), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 227/334 (67%), Positives = 274/334 (82%), Gaps = 5/334 (1%)

Query: 25  IGDNSQQTDTSTDVDTDDKNQVNGVRRGVPIVTGSMEQSKIKTGDQKALRRLAQNREAAR 84
           + + S +T+TSTD DTD+   +      + +V+ S ++S+ K GDQK +RRLAQNREAAR
Sbjct: 1   MAEASPRTETSTD-DTDENLMLEPGNAALAVVSDSSDRSRDKNGDQKTMRRLAQNREAAR 59

Query: 85  KSRLRKKAYVQQLENSRLRLAQLEQELQRARQQGIFIATGVSGDIGHSVAGNGVLAFDLD 144
           KSRLRKKAYVQQLENSRL+L QLEQELQRARQQGIFI++  S D  HS++GNG LAFD +
Sbjct: 60  KSRLRKKAYVQQLENSRLKLTQLEQELQRARQQGIFISS--SADQSHSMSGNGALAFDTE 117

Query: 145 YVHWVDEHQRLINDLRSAVNSSMGDNELRHLVDGVMAHYEEVFQLKSIGTKADVFHMLSG 204
           Y  W++EH R +N+LR+AVN+  GD ELR +V+ +M+HY+E+F+ K    KADVFH+LSG
Sbjct: 118 YARWLEEHNRQVNELRAAVNAHAGDTELRSVVEKIMSHYDEIFKQKGNAAKADVFHVLSG 177

Query: 205 MWKTPVERCFMWLGGFRSSELLKVIGNHLEPLTDQQLMGICNLQQSSQQAEDALSQGMEA 264
           MWKTP ERCF+WLGGFR SELLK++   LEPLT+QQL GICNLQQSSQQAEDALSQGMEA
Sbjct: 178 MWKTPAERCFLWLGGFRPSELLKLLSTQLEPLTEQQLSGICNLQQSSQQAEDALSQGMEA 237

Query: 265 LQQSLVDTLS--ASSLGPTSSGNVADYMGQMALAMGKLATLENFIHQADLLRQQTLQQMH 322
           LQQSL +TL+    S G  S+GNVA+YMGQMA+AMGKL TLENF+ QAD LRQQTLQQM 
Sbjct: 238 LQQSLAETLAGSIGSSGSGSTGNVANYMGQMAMAMGKLGTLENFLSQADNLRQQTLQQMQ 297

Query: 323 RILTARQAARALLVINDYTSRLRALSSLWLARPR 356
           RILT RQ+ARALLVI+DY+SRLRALSSLWLARP+
Sbjct: 298 RILTTRQSARALLVISDYSSRLRALSSLWLARPK 331

Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.

Triticum aestivum (taxid: 4565)

>sp|Q39140|TGA6_ARATH Transcription factor TGA6 OS=Arabidopsis thaliana GN=TGA6 PE=1 SV=2

 Score =  434 bits (1116), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 229/334 (68%), Positives = 272/334 (81%), Gaps = 7/334 (2%)

Query: 25  IGDNSQQTDTSTDVDTDDKNQVNGVRRGV--PIVTGSMEQSKIKTGDQKALRRLAQNREA 82
           + D S +TD STD DTD ++   G  RG      + S ++SK K  DQK LRRLAQNREA
Sbjct: 1   MADTSSRTDVSTDGDTDHRDL--GSDRGHMHAAASDSSDRSKDKL-DQKTLRRLAQNREA 57

Query: 83  ARKSRLRKKAYVQQLENSRLRLAQLEQELQRARQQGIFIATGVSGDIGHSVAGNGVLAFD 142
           ARKSRLRKKAYVQQLENSRL+L QLEQELQRARQQG+FI++  SGD  HS  GNG LAFD
Sbjct: 58  ARKSRLRKKAYVQQLENSRLKLTQLEQELQRARQQGVFISS--SGDQAHSTGGNGALAFD 115

Query: 143 LDYVHWVDEHQRLINDLRSAVNSSMGDNELRHLVDGVMAHYEEVFQLKSIGTKADVFHML 202
            ++  W++E  R +N+LRSA+N+  GD ELR +VDGVMAHYEE+F++KS   K DVFH+L
Sbjct: 116 AEHSRWLEEKNRQMNELRSALNAHAGDTELRIIVDGVMAHYEELFRIKSNAAKNDVFHLL 175

Query: 203 SGMWKTPVERCFMWLGGFRSSELLKVIGNHLEPLTDQQLMGICNLQQSSQQAEDALSQGM 262
           SGMWKTP ERCF+WLGGFRSSELLK++ N LEP+T++Q+MGI +LQQ+SQQAEDALSQGM
Sbjct: 176 SGMWKTPAERCFLWLGGFRSSELLKLLANQLEPMTERQVMGINSLQQTSQQAEDALSQGM 235

Query: 263 EALQQSLVDTLSASSLGPTSSGNVADYMGQMALAMGKLATLENFIHQADLLRQQTLQQMH 322
           E+LQQSL DTLS+ +LG +SS NVA YMGQMA+AMG+L TLE FI QAD LR QTLQQM 
Sbjct: 236 ESLQQSLADTLSSGTLGSSSSDNVASYMGQMAMAMGQLGTLEGFIRQADNLRLQTLQQML 295

Query: 323 RILTARQAARALLVINDYTSRLRALSSLWLARPR 356
           R+LT RQ+ARALL I+DY+SRLRALSSLWLARPR
Sbjct: 296 RVLTTRQSARALLAIHDYSSRLRALSSLWLARPR 329

Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|P43273|TGA2_ARATH Transcription factor TGA2 OS=Arabidopsis thaliana GN=TGA2 PE=1 SV=1

 Score =  421 bits (1081), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 218/307 (71%), Positives = 255/307 (83%), Gaps = 4/307 (1%)

Query: 52  GVPIVTGSMEQSKIKTG--DQKALRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQ 109
           G  + T + + S    G  DQK LRRLAQNREAARKSRLRKKAYVQQLENSRL+L QLEQ
Sbjct: 25  GALVNTAASDSSDRSKGKMDQKTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQ 84

Query: 110 ELQRARQQGIFIATGVSGDIGHSVAGNGVLAFDLDYVHWVDEHQRLINDLRSAVNSSMGD 169
           ELQRARQQG+FI+   +GD  HS  GNG LAFD ++  W++E  + +N+LRSA+N+  GD
Sbjct: 85  ELQRARQQGVFISG--TGDQAHSTGGNGALAFDAEHSRWLEEKNKQMNELRSALNAHAGD 142

Query: 170 NELRHLVDGVMAHYEEVFQLKSIGTKADVFHMLSGMWKTPVERCFMWLGGFRSSELLKVI 229
           +ELR +VDGVMAHYEE+F++KS   K DVFH+LSGMWKTP ERCF+WLGGFRSSELLK++
Sbjct: 143 SELRIIVDGVMAHYEELFRIKSNAAKNDVFHLLSGMWKTPAERCFLWLGGFRSSELLKLL 202

Query: 230 GNHLEPLTDQQLMGICNLQQSSQQAEDALSQGMEALQQSLVDTLSASSLGPTSSGNVADY 289
            N LEP+T++QLMGI NLQQ+SQQAEDALSQGME+LQQSL DTLS+ +LG +SSGNVA Y
Sbjct: 203 ANQLEPMTERQLMGINNLQQTSQQAEDALSQGMESLQQSLADTLSSGTLGSSSSGNVASY 262

Query: 290 MGQMALAMGKLATLENFIHQADLLRQQTLQQMHRILTARQAARALLVINDYTSRLRALSS 349
           MGQMA+AMGKL TLE FI QAD LR QTLQQM R+LT RQ+ARALL I+DY SRLRALSS
Sbjct: 263 MGQMAMAMGKLGTLEGFIRQADNLRLQTLQQMIRVLTTRQSARALLAIHDYFSRLRALSS 322

Query: 350 LWLARPR 356
           LWLARPR
Sbjct: 323 LWLARPR 329

Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Required to induce the systemic acquired resistance (SAR) via the regulation of pathogenesis-related genes expression. Binding to the as-1 element of PR-1 promoter is salicylic acid-inducible and mediated by NPR1. Could also bind to the C-boxes (5'-ATGACGTCAT-3') with high affinity.

Arabidopsis thaliana (taxid: 3702)

>sp|Q39163|TGA5_ARATH Transcription factor TGA5 OS=Arabidopsis thaliana GN=TGA5 PE=1 SV=2

 Score =  406 bits (1044), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 218/333 (65%), Positives = 260/333 (78%), Gaps = 5/333 (1%)

Query: 25  IGDNSQQTDTSTDVDTDDKNQVNGVRRG-VPIVTGSMEQSKIKTGDQKALRRLAQNREAA 83
           +GD S +T  STD DTD  N +     G + I             DQK LRRLAQNREAA
Sbjct: 1   MGDTSPRTSVSTDGDTDHNNLM--FDEGHLGIGASDSSDRSKSKMDQKTLRRLAQNREAA 58

Query: 84  RKSRLRKKAYVQQLENSRLRLAQLEQELQRARQQGIFIATGVSGDIGHSVAGNGVLAFDL 143
           RKSRLRKKAYVQQLENSRL+L QLEQELQRARQQG+FI++  SGD  HS AG+G +AFD+
Sbjct: 59  RKSRLRKKAYVQQLENSRLKLTQLEQELQRARQQGVFISS--SGDQAHSTAGDGAMAFDV 116

Query: 144 DYVHWVDEHQRLINDLRSAVNSSMGDNELRHLVDGVMAHYEEVFQLKSIGTKADVFHMLS 203
           +Y  W ++  R + +L SA++S   D+ELR +VDGV+AHYEE++++K    K+DVFH+LS
Sbjct: 117 EYRRWQEDKNRQMKELSSAIDSHATDSELRIIVDGVIAHYEELYRIKGNAAKSDVFHLLS 176

Query: 204 GMWKTPVERCFMWLGGFRSSELLKVIGNHLEPLTDQQLMGICNLQQSSQQAEDALSQGME 263
           GMWKTP ERCF+WLGGFRSSELLK+I + LEPLT+QQ + I NLQQSSQQAEDALSQGM+
Sbjct: 177 GMWKTPAERCFLWLGGFRSSELLKLIASQLEPLTEQQSLDINNLQQSSQQAEDALSQGMD 236

Query: 264 ALQQSLVDTLSASSLGPTSSGNVADYMGQMALAMGKLATLENFIHQADLLRQQTLQQMHR 323
            LQQSL DTLS+ +LG +SSGNVA YMGQMA+AMGKL TLE FI QAD LR QT QQM R
Sbjct: 237 NLQQSLADTLSSGTLGSSSSGNVASYMGQMAMAMGKLGTLEGFIRQADNLRLQTYQQMVR 296

Query: 324 ILTARQAARALLVINDYTSRLRALSSLWLARPR 356
           +LT RQ+ARALL +++YT RLRALSSLWLARPR
Sbjct: 297 LLTTRQSARALLAVHNYTLRLRALSSLWLARPR 329

Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q39162|TGA4_ARATH Transcription factor TGA4 OS=Arabidopsis thaliana GN=TGA4 PE=1 SV=2

 Score =  331 bits (848), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 167/289 (57%), Positives = 211/289 (73%), Gaps = 10/289 (3%)

Query: 71  KALRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQRARQQGIFIATGVSGDIG 130
           K  RRLAQNREAARKSRLRKKAYVQQLE SRL+L  LEQEL RARQQG ++  GV  +  
Sbjct: 80  KIQRRLAQNREAARKSRLRKKAYVQQLETSRLKLIHLEQELDRARQQGFYVGNGVDTN-A 138

Query: 131 HSVAGN---GVLAFDLDYVHWVDEHQRLINDLRSAVNSSMGDNELRHLVDGVMAHYEEVF 187
            S + N   G++AF+++Y HWV+E  R I +LR+ ++  + D ELR LV+  M HY ++F
Sbjct: 139 LSFSDNMSSGIVAFEMEYGHWVEEQNRQICELRTVLHGQVSDIELRSLVENAMKHYFQLF 198

Query: 188 QLKSIGTKADVFHMLSGMWKTPVERCFMWLGGFRSSELLKVIGNHLEPLTDQQLMGICNL 247
           ++KS   K DVF+++SGMWKT  ER F+W+GGFR SELLKV+  H +PLTDQQL+ +CNL
Sbjct: 199 RMKSAAAKIDVFYVMSGMWKTSAERFFLWIGGFRPSELLKVLLPHFDPLTDQQLLDVCNL 258

Query: 248 QQSSQQAEDALSQGMEALQQSLVDTLSASSLGPTSSGNVADYMGQMALAMGKLATLENFI 307
           +QS QQAEDALSQGME LQ +L ++++A  LG  S      Y+ QM  AM +L  L +F+
Sbjct: 259 RQSCQQAEDALSQGMEKLQHTLAESVAAGKLGEGS------YIPQMTCAMERLEALVSFV 312

Query: 308 HQADLLRQQTLQQMHRILTARQAARALLVINDYTSRLRALSSLWLARPR 356
           +QAD LR +TLQQMHRILT RQAAR LL + +Y  RLRALSS W AR R
Sbjct: 313 NQADHLRHETLQQMHRILTTRQAARGLLALGEYFQRLRALSSSWAARQR 361

Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q39237|TGA1_ARATH Transcription factor TGA1 OS=Arabidopsis thaliana GN=TGA1 PE=1 SV=2

 Score =  323 bits (828), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 179/354 (50%), Positives = 234/354 (66%), Gaps = 17/354 (4%)

Query: 5   GTTIGSSLGSGHIENWGESGIGDNSQQTDTSTDVDTDDKNQVNGVRRGVPIVTGSMEQSK 64
           G +  S++ +G + N     I  N+Q+ D +   DT           G P +    E S 
Sbjct: 27  GESFKSNISNGTM-NTPNHIIIPNNQKLDNNVSEDTSHGTA------GTPHMF-DQEAST 78

Query: 65  IKTGDQKALRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQRARQQGIFIATG 124
            +  D K  RRLAQNREAARKSRLRKKAYVQQLE SRL+L QLEQEL RARQQG ++  G
Sbjct: 79  SRHPD-KIQRRLAQNREAARKSRLRKKAYVQQLETSRLKLIQLEQELDRARQQGFYVGNG 137

Query: 125 V-SGDIGHSVAGN-GVLAFDLDYVHWVDEHQRLINDLRSAVNSSMGDNELRHLVDGVMAH 182
           + +  +G S   N G+ AF+++Y HWV+E  R I +LR+ ++  + D ELR LV+  M H
Sbjct: 138 IDTNSLGFSETMNPGIAAFEMEYGHWVEEQNRQICELRTVLHGHINDIELRSLVENAMKH 197

Query: 183 YEEVFQLKSIGTKADVFHMLSGMWKTPVERCFMWLGGFRSSELLKVIGNHLEPLTDQQLM 242
           Y E+F++KS   KADVF ++SGMW+T  ER F+W+GGFR S+LLKV+  H + LTDQQL+
Sbjct: 198 YFELFRMKSSAAKADVFFVMSGMWRTSAERFFLWIGGFRPSDLLKVLLPHFDVLTDQQLL 257

Query: 243 GICNLQQSSQQAEDALSQGMEALQQSLVDTLSASSLGPTSSGNVADYMGQMALAMGKLAT 302
            +CNL+QS QQAEDAL+QGME LQ +L D ++A  LG  S      Y+ Q+  AM +L  
Sbjct: 258 DVCNLKQSCQQAEDALTQGMEKLQHTLADCVAAGQLGEGS------YIPQVNSAMDRLEA 311

Query: 303 LENFIHQADLLRQQTLQQMHRILTARQAARALLVINDYTSRLRALSSLWLARPR 356
           L +F++QAD LR +TLQQM+RILT RQAAR LL + +Y  RLRALSS W  R R
Sbjct: 312 LVSFVNQADHLRHETLQQMYRILTTRQAARGLLALGEYFQRLRALSSSWATRHR 365

Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q39234|TGA3_ARATH Transcription factor TGA3 OS=Arabidopsis thaliana GN=TGA3 PE=1 SV=1

 Score =  321 bits (822), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 174/329 (52%), Positives = 227/329 (68%), Gaps = 21/329 (6%)

Query: 39  DTDDKNQVNGVRRGVPIVTGSMEQSKIKTGDQ-------KALRRLAQNREAARKSRLRKK 91
           + DD N+VN       +   S+E       DQ       K  RRLAQNREAARKSRLRKK
Sbjct: 63  EADDNNRVNYT----SVYNNSLEAEPSSNNDQDEDRINDKMKRRLAQNREAARKSRLRKK 118

Query: 92  AYVQQLENSRLRLAQLEQELQRARQQGIFIATGVSGDIGH-SVAGN---GVLAFDLDYVH 147
           A+VQQLE SRL+L+QLEQEL RARQQG+ +    S D  +   AGN   G+ AF+++Y H
Sbjct: 119 AHVQQLEESRLKLSQLEQELVRARQQGLCVRN--SSDTSYLGPAGNMNSGIAAFEMEYTH 176

Query: 148 WVDEHQRLINDLRSAVNSSMGDNELRHLVDGVMAHYEEVFQLKSIGTKADVFHMLSGMWK 207
           W++E  R ++++R+A+ + +GD EL+ LVD  + HY  +F++K+   KADVF ++SGMW+
Sbjct: 177 WLEEQNRRVSEIRTALQAHIGDIELKMLVDSCLNHYANLFRMKADAAKADVFFLMSGMWR 236

Query: 208 TPVERCFMWLGGFRSSELLKVIGNHLEPLTDQQLMGICNLQQSSQQAEDALSQGMEALQQ 267
           T  ER F W+GGFR SELL V+  ++EPLTDQQL+ + NLQQSSQQAE+ALSQG++ LQQ
Sbjct: 237 TSTERFFQWIGGFRPSELLNVVMPYVEPLTDQQLLEVRNLQQSSQQAEEALSQGLDKLQQ 296

Query: 268 SLVDTLSASSLGPTSSGNVADYMGQMALAMGKLATLENFIHQADLLRQQTLQQMHRILTA 327
            LV+++ A  +    S N   +   MA AM  L  LE+F++QAD LRQQTLQQM +ILT 
Sbjct: 297 GLVESI-AIQIKVVESVN---HGAPMASAMENLQALESFVNQADHLRQQTLQQMSKILTT 352

Query: 328 RQAARALLVINDYTSRLRALSSLWLARPR 356
           RQAAR LL + +Y  RLRALSSLW ARPR
Sbjct: 353 RQAARGLLALGEYFHRLRALSSLWAARPR 381

Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Required to induce the systemic acquired resistance (SAR) via the regulation of pathogenesis-related genes expression. Binding to the as-1 element of PR-1 promoter is salicylic acid-inducible and mediated by NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	357
224099349	436	predicted protein [Populus trichocarpa]	0.997	0.816	0.831	1e-172
297737848	453	unnamed protein product [Vitis vinifera]	0.997	0.785	0.822	1e-164
359472703	499	PREDICTED: transcription factor HBP-1b(c	0.997	0.713	0.822	1e-163
255576507	476	Transcription factor HBP-1b(c1), putativ	0.988	0.741	0.811	1e-163
449523335	377	PREDICTED: transcription factor HBP-1b(c	0.969	0.917	0.795	1e-162
449465641	466	PREDICTED: transcription factor HBP-1b(c	0.969	0.742	0.795	1e-162
356499701	468	PREDICTED: transcription factor HBP-1b(c	0.991	0.756	0.745	1e-152
385866429	452	perianthia [Rosa chinensis]	0.971	0.767	0.734	1e-141
356498294	475	PREDICTED: transcription factor HBP-1b(c	0.991	0.745	0.734	1e-137
242059025	468	hypothetical protein SORBIDRAFT_03g03756	0.955	0.728	0.697	1e-137

>gi|224099349|ref|XP_002311449.1| predicted protein [Populus trichocarpa] gi|222851269|gb|EEE88816.1| predicted protein [Populus trichocarpa]

 Score =  610 bits (1574), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 297/357 (83%), Positives = 323/357 (90%), Gaps = 1/357 (0%)

Query: 1   MFQKGTTIGSSLGSGH-IENWGESGIGDNSQQTDTSTDVDTDDKNQVNGVRRGVPIVTGS 59
           M+QKGT  GSSLG+   IE WG+SG+ DNSQQTDTSTDVD DDKNQ+ GV+ G  +V  S
Sbjct: 79  MYQKGTGFGSSLGNWQSIETWGDSGMADNSQQTDTSTDVDADDKNQLYGVQHGTVVVVES 138

Query: 60  MEQSKIKTGDQKALRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQRARQQGI 119
           ++QSK KTGDQK LRRLAQNREAARKSRLRKKAYVQQLE+SRLRL QLEQELQRARQQG 
Sbjct: 139 VDQSKGKTGDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLRLTQLEQELQRARQQGF 198

Query: 120 FIATGVSGDIGHSVAGNGVLAFDLDYVHWVDEHQRLINDLRSAVNSSMGDNELRHLVDGV 179
           FIA+G SGD GHS+AGN   AFDLDY  W+DEH RLINDLRSA+NS M D+ELR LVDGV
Sbjct: 199 FIASGFSGDHGHSIAGNEAFAFDLDYSRWLDEHHRLINDLRSAMNSHMSDDELRLLVDGV 258

Query: 180 MAHYEEVFQLKSIGTKADVFHMLSGMWKTPVERCFMWLGGFRSSELLKVIGNHLEPLTDQ 239
           MAHY+E+F+LKSIG KADVFHMLSGMWKTP ERCFMWLGGF+SSELLK++GNHLEPLTDQ
Sbjct: 259 MAHYDEIFRLKSIGAKADVFHMLSGMWKTPAERCFMWLGGFKSSELLKILGNHLEPLTDQ 318

Query: 240 QLMGICNLQQSSQQAEDALSQGMEALQQSLVDTLSASSLGPTSSGNVADYMGQMALAMGK 299
           QLMGICNLQQSSQQAEDALSQGMEALQQSLVDTLS++SLGP  SGNVADYMGQMA+AMGK
Sbjct: 319 QLMGICNLQQSSQQAEDALSQGMEALQQSLVDTLSSTSLGPAGSGNVADYMGQMAIAMGK 378

Query: 300 LATLENFIHQADLLRQQTLQQMHRILTARQAARALLVINDYTSRLRALSSLWLARPR 356
           LATLENF+HQADLLRQQTLQQMHRILT RQAARALLVI+DYTSRLRALSSLWLARPR
Sbjct: 379 LATLENFLHQADLLRQQTLQQMHRILTTRQAARALLVISDYTSRLRALSSLWLARPR 435

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297737848|emb|CBI27049.3| unnamed protein product [Vitis vinifera]

 Score =  583 bits (1503), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 297/361 (82%), Positives = 324/361 (89%), Gaps = 5/361 (1%)

Query: 1   MFQKGTTIGS-----SLGSGHIENWGESGIGDNSQQTDTSTDVDTDDKNQVNGVRRGVPI 55
           MF KGT   +     SLG+GH ENWGESG+GDNSQQTDTSTDVDTDDKNQ +GV+ G  +
Sbjct: 92  MFSKGTAETATATVASLGNGHFENWGESGMGDNSQQTDTSTDVDTDDKNQYHGVQHGALV 151

Query: 56  VTGSMEQSKIKTGDQKALRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQRAR 115
              SM+QSK KTGDQK LRRLAQNREAARKSRLRKKAYVQQLE S+L+L QLEQELQRAR
Sbjct: 152 AVDSMDQSKGKTGDQKTLRRLAQNREAARKSRLRKKAYVQQLECSQLKLTQLEQELQRAR 211

Query: 116 QQGIFIATGVSGDIGHSVAGNGVLAFDLDYVHWVDEHQRLINDLRSAVNSSMGDNELRHL 175
           QQG+FIATG SGD  HS+ GNG LAFD+DY  W+DEHQRLINDLRSAVNS +GDNELR L
Sbjct: 212 QQGVFIATGFSGDQSHSMGGNGALAFDMDYARWLDEHQRLINDLRSAVNSHVGDNELRIL 271

Query: 176 VDGVMAHYEEVFQLKSIGTKADVFHMLSGMWKTPVERCFMWLGGFRSSELLKVIGNHLEP 235
           VDGVMAHY+E+F+LKS+G K+DVFHMLSGMWKTP ERCFMWLGGFRSSELLK++GN LEP
Sbjct: 272 VDGVMAHYDEIFRLKSMGAKSDVFHMLSGMWKTPAERCFMWLGGFRSSELLKILGNQLEP 331

Query: 236 LTDQQLMGICNLQQSSQQAEDALSQGMEALQQSLVDTLSASSLGPTSSGNVADYMGQMAL 295
           LTDQQLMGICNLQQSSQQAEDALSQGMEALQQSLV+TLS++SLGP  SGNVADYMGQMA+
Sbjct: 332 LTDQQLMGICNLQQSSQQAEDALSQGMEALQQSLVETLSSNSLGPAGSGNVADYMGQMAI 391

Query: 296 AMGKLATLENFIHQADLLRQQTLQQMHRILTARQAARALLVINDYTSRLRALSSLWLARP 355
           AMGKLATLENF+HQADLLRQQTLQQMHRILT RQAARALLVI+DY SRLRALSSLWLARP
Sbjct: 392 AMGKLATLENFLHQADLLRQQTLQQMHRILTTRQAARALLVISDYMSRLRALSSLWLARP 451

Query: 356 R 356
           R
Sbjct: 452 R 452

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359472703|ref|XP_002282030.2| PREDICTED: transcription factor HBP-1b(c1)-like [Vitis vinifera]

 Score =  581 bits (1498), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 297/361 (82%), Positives = 324/361 (89%), Gaps = 5/361 (1%)

Query: 1   MFQKGTTIGS-----SLGSGHIENWGESGIGDNSQQTDTSTDVDTDDKNQVNGVRRGVPI 55
           MF KGT   +     SLG+GH ENWGESG+GDNSQQTDTSTDVDTDDKNQ +GV+ G  +
Sbjct: 138 MFSKGTAETATATVASLGNGHFENWGESGMGDNSQQTDTSTDVDTDDKNQYHGVQHGALV 197

Query: 56  VTGSMEQSKIKTGDQKALRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQRAR 115
              SM+QSK KTGDQK LRRLAQNREAARKSRLRKKAYVQQLE S+L+L QLEQELQRAR
Sbjct: 198 AVDSMDQSKGKTGDQKTLRRLAQNREAARKSRLRKKAYVQQLECSQLKLTQLEQELQRAR 257

Query: 116 QQGIFIATGVSGDIGHSVAGNGVLAFDLDYVHWVDEHQRLINDLRSAVNSSMGDNELRHL 175
           QQG+FIATG SGD  HS+ GNG LAFD+DY  W+DEHQRLINDLRSAVNS +GDNELR L
Sbjct: 258 QQGVFIATGFSGDQSHSMGGNGALAFDMDYARWLDEHQRLINDLRSAVNSHVGDNELRIL 317

Query: 176 VDGVMAHYEEVFQLKSIGTKADVFHMLSGMWKTPVERCFMWLGGFRSSELLKVIGNHLEP 235
           VDGVMAHY+E+F+LKS+G K+DVFHMLSGMWKTP ERCFMWLGGFRSSELLK++GN LEP
Sbjct: 318 VDGVMAHYDEIFRLKSMGAKSDVFHMLSGMWKTPAERCFMWLGGFRSSELLKILGNQLEP 377

Query: 236 LTDQQLMGICNLQQSSQQAEDALSQGMEALQQSLVDTLSASSLGPTSSGNVADYMGQMAL 295
           LTDQQLMGICNLQQSSQQAEDALSQGMEALQQSLV+TLS++SLGP  SGNVADYMGQMA+
Sbjct: 378 LTDQQLMGICNLQQSSQQAEDALSQGMEALQQSLVETLSSNSLGPAGSGNVADYMGQMAI 437

Query: 296 AMGKLATLENFIHQADLLRQQTLQQMHRILTARQAARALLVINDYTSRLRALSSLWLARP 355
           AMGKLATLENF+HQADLLRQQTLQQMHRILT RQAARALLVI+DY SRLRALSSLWLARP
Sbjct: 438 AMGKLATLENFLHQADLLRQQTLQQMHRILTTRQAARALLVISDYMSRLRALSSLWLARP 497

Query: 356 R 356
           R
Sbjct: 498 R 498

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255576507|ref|XP_002529145.1| Transcription factor HBP-1b(c1), putative [Ricinus communis] gi|223531424|gb|EEF33258.1| Transcription factor HBP-1b(c1), putative [Ricinus communis]

 Score =  580 bits (1495), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 298/367 (81%), Positives = 327/367 (89%), Gaps = 14/367 (3%)

Query: 1   MFQKGTTIGSSLGSGH-----------IENWGESGIGDNSQQTDTSTDVDTDDKNQVNGV 49
           M+ KGTTIGSSLG+GH           IENWG+SG+ DNSQQTDTSTDVDTD++NQ++G+
Sbjct: 112 MYHKGTTIGSSLGNGHHNNNNNNNNNGIENWGDSGVADNSQQTDTSTDVDTDERNQLHGL 171

Query: 50  RRGVPIVTGSMEQSKIKTGDQKALRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQ 109
           + G  +V  SM+QSK K GDQK LRRLAQNREAARKSRLRKKAYVQQLENSRL+LAQLEQ
Sbjct: 172 QHGTMVVVDSMDQSKAKAGDQKTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLAQLEQ 231

Query: 110 ELQRARQQGIFIATGVSGDIGHSVAGNGVLAFDLDYVHWVDEHQRLINDLRSAVNSSMGD 169
           ELQRARQQG+F+ATG SGD G   AGNG +AFD+DY  W++E QRLINDLRSAVNS M D
Sbjct: 232 ELQRARQQGMFVATGFSGDHG---AGNGAVAFDMDYTRWLEEQQRLINDLRSAVNSHMTD 288

Query: 170 NELRHLVDGVMAHYEEVFQLKSIGTKADVFHMLSGMWKTPVERCFMWLGGFRSSELLKVI 229
           NEL  LVD VMAHY+E+F+LKSIGTK DVFHMLSGMWKTP ERCFMWLGGFRSSELLK++
Sbjct: 289 NELCLLVDAVMAHYDEIFRLKSIGTKVDVFHMLSGMWKTPAERCFMWLGGFRSSELLKIL 348

Query: 230 GNHLEPLTDQQLMGICNLQQSSQQAEDALSQGMEALQQSLVDTLSASSLGPTSSGNVADY 289
           GNHLEPLTDQQLMGICNLQQSSQQAEDALSQGMEALQQSLVDTLS+++LGP  SGNVADY
Sbjct: 349 GNHLEPLTDQQLMGICNLQQSSQQAEDALSQGMEALQQSLVDTLSSTTLGPAGSGNVADY 408

Query: 290 MGQMALAMGKLATLENFIHQADLLRQQTLQQMHRILTARQAARALLVINDYTSRLRALSS 349
           MGQMA+AMGKLATLENF+HQADLLRQQTLQQMHRILT RQAARALLVINDYTSRLRALSS
Sbjct: 409 MGQMAIAMGKLATLENFLHQADLLRQQTLQQMHRILTTRQAARALLVINDYTSRLRALSS 468

Query: 350 LWLARPR 356
           LWLARPR
Sbjct: 469 LWLARPR 475

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449523335|ref|XP_004168679.1| PREDICTED: transcription factor HBP-1b(c1)-like, partial [Cucumis sativus]

 Score =  578 bits (1491), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 276/347 (79%), Positives = 309/347 (89%), Gaps = 1/347 (0%)

Query: 10  SSLGSGHIENWGESGIGDNSQQTDTSTDVDTDDKNQVNGVRRGVPIVTGSMEQSKIKTGD 69
           SSLG+G  ENWGES + DNSQQTDTSTD+D D++NQ  G   G  +   SM+QSK K+ D
Sbjct: 31  SSLGNGSFENWGESAMADNSQQTDTSTDIDNDERNQFQGAVHGALMAVDSMDQSKAKSAD 90

Query: 70  QKALRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQRARQQGIFIATGVSGDI 129
           QK LRRLAQNREAARKSRLRKKAYVQQLENSR RLAQLEQ+L RARQQGIF+A+GV GD 
Sbjct: 91  QKTLRRLAQNREAARKSRLRKKAYVQQLENSRQRLAQLEQDLHRARQQGIFVASGV-GDH 149

Query: 130 GHSVAGNGVLAFDLDYVHWVDEHQRLINDLRSAVNSSMGDNELRHLVDGVMAHYEEVFQL 189
             S+AGNG LAFDLDY  W+DEHQRLINDLR++ NS +GD+ELR LVDGVM HY+E+F+L
Sbjct: 150 CASMAGNGALAFDLDYARWLDEHQRLINDLRASANSQLGDDELRFLVDGVMTHYDELFRL 209

Query: 190 KSIGTKADVFHMLSGMWKTPVERCFMWLGGFRSSELLKVIGNHLEPLTDQQLMGICNLQQ 249
           KS+G KADVFH+LSGMWKTP ERCFMWLGGFRSSELLK++G+HLEPLTDQQLMGICNLQQ
Sbjct: 210 KSVGAKADVFHILSGMWKTPAERCFMWLGGFRSSELLKIVGSHLEPLTDQQLMGICNLQQ 269

Query: 250 SSQQAEDALSQGMEALQQSLVDTLSASSLGPTSSGNVADYMGQMALAMGKLATLENFIHQ 309
           SSQQAEDALSQG+EALQQSLV+TLS++SLGP SSGNVADYMGQMA+AM KL TLENF+HQ
Sbjct: 270 SSQQAEDALSQGIEALQQSLVETLSSASLGPASSGNVADYMGQMAIAMSKLTTLENFLHQ 329

Query: 310 ADLLRQQTLQQMHRILTARQAARALLVINDYTSRLRALSSLWLARPR 356
           ADLLRQQTLQQMHRILT RQAARALLVI+DY SRLRALSSLWLARP+
Sbjct: 330 ADLLRQQTLQQMHRILTTRQAARALLVISDYISRLRALSSLWLARPK 376

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449465641|ref|XP_004150536.1| PREDICTED: transcription factor HBP-1b(c1)-like [Cucumis sativus]

 Score =  577 bits (1488), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 276/347 (79%), Positives = 308/347 (88%), Gaps = 1/347 (0%)

Query: 10  SSLGSGHIENWGESGIGDNSQQTDTSTDVDTDDKNQVNGVRRGVPIVTGSMEQSKIKTGD 69
           SSLG+G  ENWGES + DNSQQTDTSTD+D D++NQ  G   G  +   SM+QSK K+ D
Sbjct: 120 SSLGNGSFENWGESAMADNSQQTDTSTDIDNDERNQFQGAVHGALMAVDSMDQSKAKSAD 179

Query: 70  QKALRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQRARQQGIFIATGVSGDI 129
           QK LRRLAQNREAARKSRLRKKAYVQQLENSR RLAQLEQ+L RARQQGIF+A+GV GD 
Sbjct: 180 QKTLRRLAQNREAARKSRLRKKAYVQQLENSRQRLAQLEQDLHRARQQGIFVASGV-GDH 238

Query: 130 GHSVAGNGVLAFDLDYVHWVDEHQRLINDLRSAVNSSMGDNELRHLVDGVMAHYEEVFQL 189
             S+AGNG LAFDLDY  W+DEHQRLINDLR+  NS +GD+ELR LVDGVM HY+E+F+L
Sbjct: 239 CASMAGNGALAFDLDYARWLDEHQRLINDLRALANSQLGDDELRFLVDGVMTHYDELFRL 298

Query: 190 KSIGTKADVFHMLSGMWKTPVERCFMWLGGFRSSELLKVIGNHLEPLTDQQLMGICNLQQ 249
           KS+G KADVFH+LSGMWKTP ERCFMWLGGFRSSELLK++G+HLEPLTDQQLMGICNLQQ
Sbjct: 299 KSVGAKADVFHILSGMWKTPAERCFMWLGGFRSSELLKIVGSHLEPLTDQQLMGICNLQQ 358

Query: 250 SSQQAEDALSQGMEALQQSLVDTLSASSLGPTSSGNVADYMGQMALAMGKLATLENFIHQ 309
           SSQQAEDALSQG+EALQQSLV+TLS++SLGP SSGNVADYMGQMA+AM KL TLENF+HQ
Sbjct: 359 SSQQAEDALSQGIEALQQSLVETLSSASLGPASSGNVADYMGQMAIAMSKLTTLENFLHQ 418

Query: 310 ADLLRQQTLQQMHRILTARQAARALLVINDYTSRLRALSSLWLARPR 356
           ADLLRQQTLQQMHRILT RQAARALLVI+DY SRLRALSSLWLARP+
Sbjct: 419 ADLLRQQTLQQMHRILTTRQAARALLVISDYISRLRALSSLWLARPK 465

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356499701|ref|XP_003518675.1| PREDICTED: transcription factor HBP-1b(c1)-like [Glycine max]

 Score =  545 bits (1404), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 267/358 (74%), Positives = 303/358 (84%), Gaps = 4/358 (1%)

Query: 1   MFQKG-TTIGSSLGSGHIENWGESGIGDNSQQTD-TSTDVDTDDKNQVNGVRRGVPIVTG 58
           M+ KG TT    LG+G +ENW +SG+ DNSQQTD TSTD+DTDD  Q N V+ G  +V  
Sbjct: 112 MYHKGVTTAALPLGNGQVENWDDSGLADNSQQTDHTSTDIDTDDIIQCNRVKNGTRMVVH 171

Query: 59  SMEQSKIKTGDQKALRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQRARQQG 118
           S + +K+K GDQK LRRLAQNREAARKSRLRKKAYVQQLE+SR++L  LEQELQRARQQG
Sbjct: 172 SKDATKVKPGDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRVKLVHLEQELQRARQQG 231

Query: 119 IFIATGVSGDIGHSVAGNGVLAFDLDYVHWVDEHQRLINDLRSAVNSSMGDNELRHLVDG 178
           IFIAT   GD GH   GNG LAFD+DY HWVDEHQRL+NDLR+A+NS M D++L  LVD 
Sbjct: 232 IFIAT--PGDQGHLAVGNGALAFDIDYAHWVDEHQRLLNDLRTAINSQMSDSDLHILVDS 289

Query: 179 VMAHYEEVFQLKSIGTKADVFHMLSGMWKTPVERCFMWLGGFRSSELLKVIGNHLEPLTD 238
           VMAHY E+F+LKSIG KADV H+ +GMWKTPVERCFMWLGG RSSELLK+I NHLEPLTD
Sbjct: 290 VMAHYNELFRLKSIGAKADVLHIHNGMWKTPVERCFMWLGGLRSSELLKIIKNHLEPLTD 349

Query: 239 QQLMGICNLQQSSQQAEDALSQGMEALQQSLVDTLSASSLGPTSSGNVADYMGQMALAMG 298
           QQLMGICNLQQSSQQAEDAL+QGMEALQQSLV+ LS++SLGP  SGNVADYMGQMALAMG
Sbjct: 350 QQLMGICNLQQSSQQAEDALNQGMEALQQSLVEILSSTSLGPNGSGNVADYMGQMALAMG 409

Query: 299 KLATLENFIHQADLLRQQTLQQMHRILTARQAARALLVINDYTSRLRALSSLWLARPR 356
           KLA L +F+H+ADLL+Q+TL+Q+ RILT RQ ARALLV NDY SRLRALSSLWLARPR
Sbjct: 410 KLAVLGSFLHKADLLKQETLEQLQRILTTRQTARALLVQNDYISRLRALSSLWLARPR 467

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|385866429|gb|AFI93430.1| perianthia [Rosa chinensis]

 Score =  507 bits (1306), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 260/354 (73%), Positives = 302/354 (85%), Gaps = 7/354 (1%)

Query: 3   QKGTTIGSSLGSGHIENWGESGIGDNSQQTDTSTDVDTDDKNQVNGVRRGVPIVTGSMEQ 62
            KGTT  SS  +GH ENWG+S + ++SQQTDTSTD++T+DKN    +   V + + S+ Q
Sbjct: 105 HKGTT--SSGNNGHFENWGDSAVAEHSQQTDTSTDIETEDKNHHGAL---VVVDSNSIGQ 159

Query: 63  SKIKTGDQKALRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQRARQQGIFIA 122
           +  +TGDQKALRRLAQNREAARKSRLRKKAYVQQLENSRL+L+QLEQELQRARQQG+ + 
Sbjct: 160 ANGRTGDQKALRRLAQNREAARKSRLRKKAYVQQLENSRLKLSQLEQELQRARQQGMLV- 218

Query: 123 TGVSGDIGHSVAGNGVLAFDLDYVHWVDEHQRLINDLRSAVNSSMGDNELRHLVDGVMAH 182
            G+SGD GHS  G+G L FD +Y  W+DEHQRLI++LRSA+NS + DN L+  VD VM H
Sbjct: 219 -GLSGDHGHSTVGSGALTFDFEYARWLDEHQRLIHELRSAMNSHLVDNGLKIHVDSVMTH 277

Query: 183 YEEVFQLKSIGTKADVFHMLSGMWKTPVERCFMWLGGFRSSELLKVIGNHLEPLTDQQLM 242
           Y+E+F+LKS+  KADVFHMLSGMWKTP ERCFMWLGGFRSSELLK++GN LEPLTDQQLM
Sbjct: 278 YDEIFRLKSVAAKADVFHMLSGMWKTPAERCFMWLGGFRSSELLKILGNQLEPLTDQQLM 337

Query: 243 GICNLQQSSQQAEDALSQGMEALQQSLVDTLSASSLGPTSSGNVADYMGQMALAMGKLAT 302
           GICNLQQSSQQ EDALSQGMEALQQSLVDTLS+++ G T S +VADYMGQMA+AMGKLAT
Sbjct: 338 GICNLQQSSQQTEDALSQGMEALQQSLVDTLSSTTHGSTVSADVADYMGQMAIAMGKLAT 397

Query: 303 LENFIHQADLLRQQTLQQMHRILTARQAARALLVINDYTSRLRALSSLWLARPR 356
           L++F+ QADLLRQQTLQQ+HRILT RQ ARALLVINDY SRLRALSSLWLARPR
Sbjct: 398 LQDFLIQADLLRQQTLQQLHRILTTRQTARALLVINDYFSRLRALSSLWLARPR 451

Source: Rosa chinensis

Species: Rosa chinensis

Genus: Rosa

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356498294|ref|XP_003517988.1| PREDICTED: transcription factor HBP-1b(c1)-like [Glycine max]

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 263/358 (73%), Positives = 298/358 (83%), Gaps = 4/358 (1%)

Query: 1   MFQKGTTIGS-SLGSGHIENWGESGIGDNSQQTDTSTDVDTDDKN-QVNGVRRGVPIVTG 58
           M+ KG T+ +  LG+G +ENW +SG  DNSQQTD ++     D     N V+ G  +V  
Sbjct: 119 MYHKGVTMAALPLGNGQVENWADSGKADNSQQTDDTSTDIDTDDIIPCNRVKNGTRMVVH 178

Query: 59  SMEQSKIKTGDQKALRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQRARQQG 118
           S +++K+K GDQK LRRLAQNREAARKSRLRKKAYVQQLE+SR++L QLEQELQRARQQG
Sbjct: 179 SKDETKVKPGDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRVKLVQLEQELQRARQQG 238

Query: 119 IFIATGVSGDIGHSVAGNGVLAFDLDYVHWVDEHQRLINDLRSAVNSSMGDNELRHLVDG 178
           IFIAT   GD GH   GNG LAFD+DY HWVDEHQRL+NDLR+AVNS M D++L  LVD 
Sbjct: 239 IFIAT--PGDQGHLAVGNGALAFDIDYAHWVDEHQRLLNDLRTAVNSQMSDSDLHILVDS 296

Query: 179 VMAHYEEVFQLKSIGTKADVFHMLSGMWKTPVERCFMWLGGFRSSELLKVIGNHLEPLTD 238
           VMAHY E+F+LKS+GTKADV H+ +GMWKTPVERCFMWLGGFRSSELLK+I NHLEPLTD
Sbjct: 297 VMAHYNELFRLKSLGTKADVLHIHNGMWKTPVERCFMWLGGFRSSELLKIIKNHLEPLTD 356

Query: 239 QQLMGICNLQQSSQQAEDALSQGMEALQQSLVDTLSASSLGPTSSGNVADYMGQMALAMG 298
           QQLMGI NLQQSSQQAEDALSQG+EALQQSLV+TLS+ SLGPT SGNV DYMGQMALAMG
Sbjct: 357 QQLMGIYNLQQSSQQAEDALSQGLEALQQSLVETLSSISLGPTDSGNVVDYMGQMALAMG 416

Query: 299 KLATLENFIHQADLLRQQTLQQMHRILTARQAARALLVINDYTSRLRALSSLWLARPR 356
           KLA LE+F+ QADLL+QQTLQQ+ RILT RQ ARALLV  DY SRLRALSSLWLARPR
Sbjct: 417 KLADLESFVRQADLLKQQTLQQLQRILTTRQTARALLVQTDYISRLRALSSLWLARPR 474

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242059025|ref|XP_002458658.1| hypothetical protein SORBIDRAFT_03g037560 [Sorghum bicolor] gi|241930633|gb|EES03778.1| hypothetical protein SORBIDRAFT_03g037560 [Sorghum bicolor]

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 244/350 (69%), Positives = 290/350 (82%), Gaps = 9/350 (2%)

Query: 11  SLGSGHIENWGESGIGDNSQQTDTSTDVDTDDKNQVNGVRRG---VPIVTGSMEQSKIKT 67
           +L +G+IENWGES +   S  TDTS+D DTD++NQ+    +G   VP  + S ++S+ K 
Sbjct: 123 ALPTGNIENWGESAMAGGSPMTDTSSDPDTDERNQM--FEQGLVTVPTASDSSDKSRDKL 180

Query: 68  GDQKALRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQRARQQGIFIATGVSG 127
            DQK LRRLAQNREAARKSRLRKKAY+Q LE+SRL+L QLEQELQRARQQGIFI+T  SG
Sbjct: 181 -DQKTLRRLAQNREAARKSRLRKKAYIQNLESSRLKLTQLEQELQRARQQGIFIST--SG 237

Query: 128 DIGHSVAGNGVLAFDLDYVHWVDEHQRLINDLRSAVNSSMGDNELRHLVDGVMAHYEEVF 187
           D   S +GNG LAFD++Y  W++EH + +N+LR+AVN+  GDN+LR +VD +MAHY+E+F
Sbjct: 238 DQPQSTSGNGALAFDMEYARWLEEHNKHVNELRAAVNAHAGDNDLRGIVDSIMAHYDEIF 297

Query: 188 QLKSIGTKADVFHMLSGMWKTPVERCFMWLGGFRSSELLKVIGNHLEPLTDQQLMGICNL 247
           +LK +  KADVFH+LSGMWKTP ERCFMWLGGFRSSELLK++  HLEPLTDQQL+GI NL
Sbjct: 298 RLKGVAAKADVFHVLSGMWKTPAERCFMWLGGFRSSELLKLLAGHLEPLTDQQLVGISNL 357

Query: 248 QQSSQQAEDALSQGMEALQQSLVDTLSASSLGPT-SSGNVADYMGQMALAMGKLATLENF 306
           QQSSQQAEDALSQGMEALQQSL +TL++ SLGP   SGNVA+YMGQMA+AMGKL TLENF
Sbjct: 358 QQSSQQAEDALSQGMEALQQSLAETLASGSLGPAGPSGNVANYMGQMAMAMGKLGTLENF 417

Query: 307 IHQADLLRQQTLQQMHRILTARQAARALLVINDYTSRLRALSSLWLARPR 356
           + QAD LR QTLQQM RILT RQ+ARALL I+DY SRLRALSSLWLARPR
Sbjct: 418 LRQADNLRLQTLQQMQRILTTRQSARALLAISDYFSRLRALSSLWLARPR 467

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	357
TAIR|locus:2026890	452	PAN "AT1G68640" [Arabidopsis t	0.949	0.75	0.629	1.6e-111
UNIPROTKB|Q9SQK1	325	TGA2.2 "BZIP transcription fac	0.761	0.836	0.692	8.7e-95
TAIR|locus:2169394	330	AHBP-1B "AT5G06950" [Arabidops	0.781	0.845	0.670	3.8e-94
TAIR|locus:2082234	355	TGA6 "AT3G12250" [Arabidopsis	0.784	0.788	0.657	4.3e-93
TAIR|locus:2169409	330	OBF5 "AT5G06960" [Arabidopsis	0.784	0.848	0.636	1.7e-89
TAIR|locus:2199968	481	TGA9 "AT1G08320" [Arabidopsis	0.731	0.542	0.522	1.1e-69
TAIR|locus:2184078	364	TGA4 "AT5G10030" [Arabidopsis	0.736	0.722	0.523	2.7e-68
TAIR|locus:2171820	368	TGA1 "AT5G65210" [Arabidopsis	0.739	0.717	0.514	1.3e-66
TAIR|locus:2030551	384	TGA3 "AT1G22070" [Arabidopsis	0.764	0.710	0.492	6e-64
TAIR|locus:2029366	368	TGA7 "AT1G77920" [Arabidopsis	0.719	0.698	0.5	6.2e-62

TAIR|locus:2026890 PAN "AT1G68640" [Arabidopsis thaliana (taxid:3702)]

 Score = 1101 (392.6 bits), Expect = 1.6e-111, P = 1.6e-111
 Identities = 216/343 (62%), Positives = 258/343 (75%)

Query:     1 MFQKGTT-IGSSLGSGHIENWGES--GIGXXXXXXXXXXXXXXXXKNQVNGVRRGVPIVT 57
             ++QKGT  +G  +G  +  +W +S   +                 K Q+NG  +G+ + T
Sbjct:    94 VYQKGTRLVGGGVGEVN-SSWCDSVSAMADNSQHTDTSTDIDTDDKTQLNGGHQGMLLAT 152

Query:    58 GSMEQSKIKTGDQKALRRLAQNREAARKSRLRKKAYVQQLENSXXXXXXXXXXXXXXXXX 117
                +QS +K+ DQ+ LRRLAQNREAARKSRLRKKAYVQQLENS                 
Sbjct:   153 NCSDQSNVKSSDQRTLRRLAQNREAARKSRLRKKAYVQQLENSRIRLAQLEEELKRARQQ 212

Query:   118 GIFIATGVSGDIGHSVAGNGVLAFDLDYVHWVDEHQRLINDLRSAVNSSMGDNELRHLVD 177
             G  +  GVS D  H  AGNGV +F+L+Y  W +EHQR+INDLRS VNS +GDN+LR LVD
Sbjct:   213 GSLVERGVSADHTHLAAGNGVFSFELEYTRWKEEHQRMINDLRSGVNSQLGDNDLRVLVD 272

Query:   178 GVMAHYEEVFQLKSIGTKADVFHMLSGMWKTPVERCFMWLGGFRSSELLKVIGNHLEPLT 237
              VM+HY+E+F+LK IGTK DVFHMLSGMWKTP ER FMWLGGFRSSELLK++GNH++PLT
Sbjct:   273 AVMSHYDEIFRLKGIGTKVDVFHMLSGMWKTPAERFFMWLGGFRSSELLKILGNHVDPLT 332

Query:   238 DQQLMGICNLQQSSQQAEDALSQGMEALQQSLVDTLSASSLGPTSSGNVADYMGQMALAM 297
             DQQL+GICNLQQSSQQAEDALSQGMEALQQSL++TLS++S+GP SS NVADYMG MA+AM
Sbjct:   333 DQQLIGICNLQQSSQQAEDALSQGMEALQQSLLETLSSASMGPNSSANVADYMGHMAMAM 392

Query:   298 GKLATLENFIHQADLLRQQTLQQMHRILTARQAARALLVINDY 340
             GKL TLENF+ QADLLRQQTLQQ+HRILT RQAARA LVI+DY
Sbjct:   393 GKLGTLENFLRQADLLRQQTLQQLHRILTTRQAARAFLVIHDY 435

GO:0003677 "DNA binding" evidence=ISS;IPI

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;IDA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0009909 "regulation of flower development" evidence=IMP

GO:0009410 "response to xenobiotic stimulus" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0048451 "petal formation" evidence=RCA

GO:0048453 "sepal formation" evidence=RCA

UNIPROTKB|Q9SQK1 TGA2.2 "BZIP transcription factor" [Nicotiana tabacum (taxid:4097)]

 Score = 943 (337.0 bits), Expect = 8.7e-95, P = 8.7e-95
 Identities = 191/276 (69%), Positives = 222/276 (80%)

Query:    66 KTGDQKALRRLAQNREAARKSRLRKKAYVQQLENSXXXXXXXXXXXXXXXXXGIFIATGV 125
             +T DQK LRRLAQNREAARKSRLRKKAYVQQLE+S                 GIFI+ G 
Sbjct:    36 RTRDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRMKLTQLEQELQRARQQGIFIS-G- 93

Query:   126 SGDIGHSVAGNGVLAFDLDYVHWVDEHQRLINDLRSAVNSSMGDNELRHLVDGVMAHYEE 185
             SGD   S++GNG LAFD++Y  W++E  R IN+LR AVNS  GD ELR +VDG++AHY++
Sbjct:    94 SGDQSQSMSGNGALAFDVEYARWLEEQNRRINELRGAVNSHAGDGELRIIVDGILAHYDD 153

Query:   186 VFQLKSIGTKADVFHMLSGMWKTPVERCFMWLGGFRSSELLKVIGNHLEPLTDQQLMGIC 245
             +F++K    K+DVFH+LSGMWKTP ERCF+WLGGFRSSELLK++ N LEPLT+QQL+ I 
Sbjct:   154 IFRIKGDAAKSDVFHILSGMWKTPAERCFLWLGGFRSSELLKLLINQLEPLTEQQLLAIN 213

Query:   246 NLQQSSQQAEDALSQGMEALQQSLVDTLSASSLGPTSS-GNVADYMGQMALAMGKLATLE 304
             NLQQSSQQAEDALSQGMEALQQSL +TL A SLGP+SS GNVA+YMGQMA+AMGKL TLE
Sbjct:   214 NLQQSSQQAEDALSQGMEALQQSLAETL-AGSLGPSSSSGNVANYMGQMAMAMGKLGTLE 272

Query:   305 NFIHQADLLRQQTLQQMHRILTARQAARALLVINDY 340
              FI QAD LRQQTLQQMHRILT RQ+ARALL I+DY
Sbjct:   273 GFIRQADNLRQQTLQQMHRILTTRQSARALLAISDY 308

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2169394 AHBP-1B "AT5G06950" [Arabidopsis thaliana (taxid:3702)]

 Score = 937 (334.9 bits), Expect = 3.8e-94, P = 3.8e-94
 Identities = 189/282 (67%), Positives = 224/282 (79%)

Query:    59 SMEQSKIKTGDQKALRRLAQNREAARKSRLRKKAYVQQLENSXXXXXXXXXXXXXXXXXG 118
             S ++SK K  DQK LRRLAQNREAARKSRLRKKAYVQQLENS                 G
Sbjct:    35 SSDRSKGKM-DQKTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQELQRARQQG 93

Query:   119 IFIATGVSGDIGHSVAGNGVLAFDLDYVHWVDEHQRLINDLRSAVNSSMGDNELRHLVDG 178
             +FI+ G +GD  HS  GNG LAFD ++  W++E  + +N+LRSA+N+  GD+ELR +VDG
Sbjct:    94 VFIS-G-TGDQAHSTGGNGALAFDAEHSRWLEEKNKQMNELRSALNAHAGDSELRIIVDG 151

Query:   179 VMAHYEEVFQLKSIGTKADVFHMLSGMWKTPVERCFMWLGGFRSSELLKVIGNHLEPLTD 238
             VMAHYEE+F++KS   K DVFH+LSGMWKTP ERCF+WLGGFRSSELLK++ N LEP+T+
Sbjct:   152 VMAHYEELFRIKSNAAKNDVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLANQLEPMTE 211

Query:   239 QQLMGICNLQQSSQQAEDALSQGMEALQQSLVDTLSASSLGPTSSGNVADYMGQMALAMG 298
             +QLMGI NLQQ+SQQAEDALSQGME+LQQSL DTLS+ +LG +SSGNVA YMGQMA+AMG
Sbjct:   212 RQLMGINNLQQTSQQAEDALSQGMESLQQSLADTLSSGTLGSSSSGNVASYMGQMAMAMG 271

Query:   299 KLATLENFIHQADLLRQQTLQQMHRILTARQAARALLVINDY 340
             KL TLE FI QAD LR QTLQQM R+LT RQ+ARALL I+DY
Sbjct:   272 KLGTLEGFIRQADNLRLQTLQQMIRVLTTRQSARALLAIHDY 313

GO:0003677 "DNA binding" evidence=ISS;IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;IDA;TAS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA;TAS

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IGI

GO:0009410 "response to xenobiotic stimulus" evidence=IGI;RCA

GO:0007062 "sister chromatid cohesion" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031048 "chromatin silencing by small RNA" evidence=RCA

GO:0045132 "meiotic chromosome segregation" evidence=RCA

GO:0048522 "positive regulation of cellular process" evidence=RCA

TAIR|locus:2082234 TGA6 "AT3G12250" [Arabidopsis thaliana (taxid:3702)]

 Score = 927 (331.4 bits), Expect = 4.3e-93, P = 4.3e-93
 Identities = 186/283 (65%), Positives = 223/283 (78%)

Query:    59 SMEQSKIKTGDQKALRRLAQNREAARKSRLRKKAYVQQLENSXXXXXXXXXXXXXXXXXG 118
             S ++SK K  DQK LRRLAQNREAARKSRLRKKAYVQQLENS                 G
Sbjct:    60 SSDRSKDKL-DQKTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQELQRARQQG 118

Query:   119 IFIATGVSGDIGHSVAGNGVLAFDLDYVHWVDEHQRLINDLRSAVNSSMGDNELRHLVDG 178
             +FI++  SGD  HS  GNG LAFD ++  W++E  R +N+LRSA+N+  GD ELR +VDG
Sbjct:   119 VFISS--SGDQAHSTGGNGALAFDAEHSRWLEEKNRQMNELRSALNAHAGDTELRIIVDG 176

Query:   179 VMAHYEEVFQLKSIGTKADVFHMLSGMWKTPVERCFMWLGGFRSSELLKVIGNHLEPLTD 238
             VMAHYEE+F++KS   K DVFH+LSGMWKTP ERCF+WLGGFRSSELLK++ N LEP+T+
Sbjct:   177 VMAHYEELFRIKSNAAKNDVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLANQLEPMTE 236

Query:   239 QQLMGICNLQQSSQQAEDALSQGMEALQQSLVDTLSASSLGPTSSGNVADYMGQMALAMG 298
             +Q+MGI +LQQ+SQQAEDALSQGME+LQQSL DTLS+ +LG +SS NVA YMGQMA+AMG
Sbjct:   237 RQVMGINSLQQTSQQAEDALSQGMESLQQSLADTLSSGTLGSSSSDNVASYMGQMAMAMG 296

Query:   299 KLATLENFIHQADLLRQQTLQQMHRILTARQAARALLVINDYT 341
             +L TLE FI QAD LR QTLQQM R+LT RQ+ARALL I+DY+
Sbjct:   297 QLGTLEGFIRQADNLRLQTLQQMLRVLTTRQSARALLAIHDYS 339

GO:0003677 "DNA binding" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA;IMP

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0009627 "systemic acquired resistance" evidence=IPI

GO:0005515 "protein binding" evidence=IPI

GO:0009410 "response to xenobiotic stimulus" evidence=IGI;RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

TAIR|locus:2169409 OBF5 "AT5G06960" [Arabidopsis thaliana (taxid:3702)]

 Score = 893 (319.4 bits), Expect = 1.7e-89, P = 1.7e-89
 Identities = 180/283 (63%), Positives = 219/283 (77%)

Query:    59 SMEQSKIKTGDQKALRRLAQNREAARKSRLRKKAYVQQLENSXXXXXXXXXXXXXXXXXG 118
             S ++SK K  DQK LRRLAQNREAARKSRLRKKAYVQQLENS                 G
Sbjct:    35 SSDRSKSKM-DQKTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQELQRARQQG 93

Query:   119 IFIATGVSGDIGHSVAGNGVLAFDLDYVHWVDEHQRLINDLRSAVNSSMGDNELRHLVDG 178
             +FI++  SGD  HS AG+G +AFD++Y  W ++  R + +L SA++S   D+ELR +VDG
Sbjct:    94 VFISS--SGDQAHSTAGDGAMAFDVEYRRWQEDKNRQMKELSSAIDSHATDSELRIIVDG 151

Query:   179 VMAHYEEVFQLKSIGTKADVFHMLSGMWKTPVERCFMWLGGFRSSELLKVIGNHLEPLTD 238
             V+AHYEE++++K    K+DVFH+LSGMWKTP ERCF+WLGGFRSSELLK+I + LEPLT+
Sbjct:   152 VIAHYEELYRIKGNAAKSDVFHLLSGMWKTPAERCFLWLGGFRSSELLKLIASQLEPLTE 211

Query:   239 QQLMGICNLQQSSQQAEDALSQGMEALQQSLVDTLSASSLGPTSSGNVADYMGQMALAMG 298
             QQ + I NLQQSSQQAEDALSQGM+ LQQSL DTLS+ +LG +SSGNVA YMGQMA+AMG
Sbjct:   212 QQSLDINNLQQSSQQAEDALSQGMDNLQQSLADTLSSGTLGSSSSGNVASYMGQMAMAMG 271

Query:   299 KLATLENFIHQADLLRQQTLQQMHRILTARQAARALLVINDYT 341
             KL TLE FI QAD LR QT QQM R+LT RQ+ARALL +++YT
Sbjct:   272 KLGTLEGFIRQADNLRLQTYQQMVRLLTTRQSARALLAVHNYT 314

GO:0003677 "DNA binding" evidence=ISS;IDA;NAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0042802 "identical protein binding" evidence=IPI

GO:0009410 "response to xenobiotic stimulus" evidence=IGI;RCA

GO:0000278 "mitotic cell cycle" evidence=RCA

GO:0000303 "response to superoxide" evidence=RCA

GO:0006396 "RNA processing" evidence=RCA

GO:0008219 "cell death" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009743 "response to carbohydrate stimulus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009873 "ethylene mediated signaling pathway" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0048522 "positive regulation of cellular process" evidence=RCA

GO:0009814 "defense response, incompatible interaction" evidence=TAS

TAIR|locus:2199968 TGA9 "AT1G08320" [Arabidopsis thaliana (taxid:3702)]

 Score = 706 (253.6 bits), Expect = 1.1e-69, P = 1.1e-69
 Identities = 142/272 (52%), Positives = 195/272 (71%)

Query:    69 DQKALRRLAQNREAARKSRLRKKAYVQQLENSXXXXXXXXXXXXXXXXXGIFIATGVSGD 128
             D K LRRLAQNREAARKSRLRKKAYVQQLE+S                 G+F+  G  G 
Sbjct:   176 DAKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLSQLEQELQRARSQGLFM--GGCGP 233

Query:   129 IGHSVAGNGVLAFDLDYVHWVDEHQRLINDLRSAVNSSMGDNELRHLVDGVMAHYEEVFQ 188
              G ++  +G   FD++Y  W+++  R ++++R+ + + + DN+LR +VDG +AH++E+F+
Sbjct:   234 PGPNIT-SGAAIFDMEYGRWLEDDNRHMSEIRTGLQAHLSDNDLRLIVDGYIAHFDEIFR 292

Query:   189 LKSIGTKADVFHMLSGMWKTPVERCFMWLGGFRSSELLKVIGNHLEPLTDQQLMGICNLQ 248
             LK++  KADVFH++ G W +P ERCF+W+ GFR S+L+K++ + ++ LT+QQLMGI +LQ
Sbjct:   293 LKAVAAKADVFHLIIGTWMSPAERCFIWMAGFRPSDLIKILVSQMDLLTEQQLMGIYSLQ 352

Query:   249 QSSQQAEDALSQGMEALQQSLVDTLSASSLGPTSSGNVADYMGQMALAMGKLATLENFIH 308
              SSQQAE+ALSQG+E LQQSL+DTL+AS   P     V D M QMA+A+GK++ LE FI 
Sbjct:   353 HSSQQAEEALSQGLEQLQQSLIDTLAAS---P-----VIDGMQQMAVALGKISNLEGFIR 404

Query:   309 QADLLRQQTLQQMHRILTARQAARALLVINDY 340
             QAD LRQQT+ Q+ RILT RQAAR  LVI +Y
Sbjct:   405 QADNLRQQTVHQLRRILTVRQAARCFLVIGEY 436

GO:0003677 "DNA binding" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0009612 "response to mechanical stimulus" evidence=RCA

GO:0019722 "calcium-mediated signaling" evidence=RCA

TAIR|locus:2184078 TGA4 "AT5G10030" [Arabidopsis thaliana (taxid:3702)]

 Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
 Identities = 143/273 (52%), Positives = 186/273 (68%)

Query:    71 KALRRLAQNREAARKSRLRKKAYVQQLENSXXXXXXXXXXXXXXXXXGIFIATGVSGDIG 130
             K  RRLAQNREAARKSRLRKKAYVQQLE S                 G ++  GV  +  
Sbjct:    80 KIQRRLAQNREAARKSRLRKKAYVQQLETSRLKLIHLEQELDRARQQGFYVGNGVDTN-A 138

Query:   131 HSVAGN---GVLAFDLDYVHWVDEHQRLINDLRSAVNSSMGDNELRHLVDGVMAHYEEVF 187
              S + N   G++AF+++Y HWV+E  R I +LR+ ++  + D ELR LV+  M HY ++F
Sbjct:   139 LSFSDNMSSGIVAFEMEYGHWVEEQNRQICELRTVLHGQVSDIELRSLVENAMKHYFQLF 198

Query:   188 QLKSIGTKADVFHMLSGMWKTPVERCFMWLGGFRSSELLKVIGNHLEPLTDQQLMGICNL 247
             ++KS   K DVF+++SGMWKT  ER F+W+GGFR SELLKV+  H +PLTDQQL+ +CNL
Sbjct:   199 RMKSAAAKIDVFYVMSGMWKTSAERFFLWIGGFRPSELLKVLLPHFDPLTDQQLLDVCNL 258

Query:   248 QQSSQQAEDALSQGMEALQQSLVDTLSASSLGPTSSGNVADYMGQMALAMGKLATLENFI 307
             +QS QQAEDALSQGME LQ +L ++++A  LG  S      Y+ QM  AM +L  L +F+
Sbjct:   259 RQSCQQAEDALSQGMEKLQHTLAESVAAGKLGEGS------YIPQMTCAMERLEALVSFV 312

Query:   308 HQADLLRQQTLQQMHRILTARQAARALLVINDY 340
             +QAD LR +TLQQMHRILT RQAAR LL + +Y
Sbjct:   313 NQADHLRHETLQQMHRILTTRQAARGLLALGEY 345

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;NAS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0009409 "response to cold" evidence=IEP

GO:0042742 "defense response to bacterium" evidence=IGI

GO:0006857 "oligopeptide transport" evidence=RCA

GO:0009410 "response to xenobiotic stimulus" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0003677 "DNA binding" evidence=TAS

TAIR|locus:2171820 TGA1 "AT5G65210" [Arabidopsis thaliana (taxid:3702)]

 Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
 Identities = 140/272 (51%), Positives = 184/272 (67%)

Query:    71 KALRRLAQNREAARKSRLRKKAYVQQLENSXXXXXXXXXXXXXXXXXGIFIATGV-SGDI 129
             K  RRLAQNREAARKSRLRKKAYVQQLE S                 G ++  G+ +  +
Sbjct:    84 KIQRRLAQNREAARKSRLRKKAYVQQLETSRLKLIQLEQELDRARQQGFYVGNGIDTNSL 143

Query:   130 GHSVAGN-GVLAFDLDYVHWVDEHQRLINDLRSAVNSSMGDNELRHLVDGVMAHYEEVFQ 188
             G S   N G+ AF+++Y HWV+E  R I +LR+ ++  + D ELR LV+  M HY E+F+
Sbjct:   144 GFSETMNPGIAAFEMEYGHWVEEQNRQICELRTVLHGHINDIELRSLVENAMKHYFELFR 203

Query:   189 LKSIGTKADVFHMLSGMWKTPVERCFMWLGGFRSSELLKVIGNHLEPLTDQQLMGICNLQ 248
             +KS   KADVF ++SGMW+T  ER F+W+GGFR S+LLKV+  H + LTDQQL+ +CNL+
Sbjct:   204 MKSSAAKADVFFVMSGMWRTSAERFFLWIGGFRPSDLLKVLLPHFDVLTDQQLLDVCNLK 263

Query:   249 QSSQQAEDALSQGMEALQQSLVDTLSASSLGPTSSGNVADYMGQMALAMGKLATLENFIH 308
             QS QQAEDAL+QGME LQ +L D ++A  LG  S      Y+ Q+  AM +L  L +F++
Sbjct:   264 QSCQQAEDALTQGMEKLQHTLADCVAAGQLGEGS------YIPQVNSAMDRLEALVSFVN 317

Query:   309 QADLLRQQTLQQMHRILTARQAARALLVINDY 340
             QAD LR +TLQQM+RILT RQAAR LL + +Y
Sbjct:   318 QADHLRHETLQQMYRILTTRQAARGLLALGEY 349

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0003677 "DNA binding" evidence=TAS

GO:0042742 "defense response to bacterium" evidence=IMP

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0009410 "response to xenobiotic stimulus" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0010043 "response to zinc ion" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0010260 "organ senescence" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

TAIR|locus:2030551 TGA3 "AT1G22070" [Arabidopsis thaliana (taxid:3702)]

 Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
 Identities = 140/284 (49%), Positives = 190/284 (66%)

Query:    61 EQSKIKTGDQKALRRLAQNREAARKSRLRKKAYVQQLENSXXXXXXXXXXXXXXXXXGIF 120
             +Q + +  D K  RRLAQNREAARKSRLRKKA+VQQLE S                 G+ 
Sbjct:    89 DQDEDRIND-KMKRRLAQNREAARKSRLRKKAHVQQLEESRLKLSQLEQELVRARQQGLC 147

Query:   121 IATGVSGDIGH-SVAGN---GVLAFDLDYVHWVDEHQRLINDLRSAVNSSMGDNELRHLV 176
             +    S D  +   AGN   G+ AF+++Y HW++E  R ++++R+A+ + +GD EL+ LV
Sbjct:   148 VRN--SSDTSYLGPAGNMNSGIAAFEMEYTHWLEEQNRRVSEIRTALQAHIGDIELKMLV 205

Query:   177 DGVMAHYEEVFQLKSIGTKADVFHMLSGMWKTPVERCFMWLGGFRSSELLKVIGNHLEPL 236
             D  + HY  +F++K+   KADVF ++SGMW+T  ER F W+GGFR SELL V+  ++EPL
Sbjct:   206 DSCLNHYANLFRMKADAAKADVFFLMSGMWRTSTERFFQWIGGFRPSELLNVVMPYVEPL 265

Query:   237 TDQQLMGICNLQQSSQQAEDALSQGMEALQQSLVDTLSASSLGPTSSGNVADYMGQMALA 296
             TDQQL+ + NLQQSSQQAE+ALSQG++ LQQ LV+++ A  +    S N   +   MA A
Sbjct:   266 TDQQLLEVRNLQQSSQQAEEALSQGLDKLQQGLVESI-AIQIKVVESVN---HGAPMASA 321

Query:   297 MGKLATLENFIHQADLLRQQTLQQMHRILTARQAARALLVINDY 340
             M  L  LE+F++QAD LRQQTLQQM +ILT RQAAR LL + +Y
Sbjct:   322 MENLQALESFVNQADHLRQQTLQQMSKILTTRQAARGLLALGEY 365

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;RCA

GO:0005515 "protein binding" evidence=IPI

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA;IPI

GO:0005516 "calmodulin binding" evidence=IDA;TAS

GO:0042742 "defense response to bacterium" evidence=RCA;IMP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009410 "response to xenobiotic stimulus" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0016045 "detection of bacterium" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031347 "regulation of defense response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

GO:0050776 "regulation of immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

GO:0051707 "response to other organism" evidence=RCA

GO:0003677 "DNA binding" evidence=IDA

TAIR|locus:2029366 TGA7 "AT1G77920" [Arabidopsis thaliana (taxid:3702)]

 Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
 Identities = 135/270 (50%), Positives = 179/270 (66%)

Query:    71 KALRRLAQNREAARKSRLRKKAYVQQLENSXXXXXXXXXXXXXXXXXGIFIATGVSGDIG 130
             K  RRLAQNREAARKSRLRKKAYVQQLE S                 G     G SG I 
Sbjct:    93 KMKRRLAQNREAARKSRLRKKAYVQQLEESRLKLSQLEQELEKVKQQGHL---GPSGSIN 149

Query:   131 HSVAGNGVLAFDLDYVHWVDEHQRLINDLRSAVNSSMGDNELRHLVDGVMAHYEEVFQLK 190
                   G+ +F+++Y HW+ E  R +++LR+A+ S + D EL+ LV+  + HY  +FQ+K
Sbjct:   150 -----TGIASFEMEYSHWLQEQSRRVSELRTALQSHISDIELKMLVESCLNHYANLFQMK 204

Query:   191 SIGTKADVFHMLSGMWKTPVERCFMWLGGFRSSELLKVIGNHLEPLTDQQLMGICNLQQS 250
             S   KADVF+++SGMW+T  ER F W+GGFR SELL V+  +L+PLTDQQ++ + NLQQS
Sbjct:   205 SDAAKADVFYLISGMWRTSTERFFQWIGGFRPSELLNVVMPYLQPLTDQQILEVRNLQQS 264

Query:   251 SQQAEDALSQGMEALQQSLVDTLSASSLGPTSSGNVADYMGQMALAMGKLATLENFIHQA 310
             SQQAEDALSQG++ LQQSL +++   ++  ++      Y   MA A+  L  LE F++QA
Sbjct:   265 SQQAEDALSQGIDKLQQSLAESIVIDAVIESTH-----YPTHMAAAIENLQALEGFVNQA 319

Query:   311 DLLRQQTLQQMHRILTARQAARALLVINDY 340
             D LRQQTLQQM +ILT RQ+AR LL + +Y
Sbjct:   320 DHLRQQTLQQMAKILTTRQSARGLLALGEY 349

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0042742 "defense response to bacterium" evidence=IMP

GO:0009410 "response to xenobiotic stimulus" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P23923	HBP1B_WHEAT	No assigned EC number	0.6796	0.9215	0.9909	N/A	no
P43273	TGA2_ARATH	No assigned EC number	0.7100	0.8487	0.9181	no	no
Q9SX27	PAN_ARATH	No assigned EC number	0.7214	0.9943	0.7853	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00081102 hypothetical protein (436 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	357
pfam14144	79	pfam14144, DOG1, Seed dormancy control	9e-40
smart00338	65	smart00338, BRLZ, basic region leucin zipper	4e-11
pfam00170	64	pfam00170, bZIP_1, bZIP transcription factor	4e-09
pfam07716	54	pfam07716, bZIP_2, Basic region leucine zipper	3e-06
cd12193	54	cd12193, B_zip1, basic leucine zipper DNA-binding	9e-05

>gnl|CDD|206313 pfam14144, DOG1, Seed dormancy control

 Score =  135 bits (341), Expect = 9e-40
 Identities = 50/79 (63%), Positives = 65/79 (82%)

Query: 154 RLINDLRSAVNSSMGDNELRHLVDGVMAHYEEVFQLKSIGTKADVFHMLSGMWKTPVERC 213
           RL+ +LR+A+N+   D+ELR LVD V+AHY+E F+LKS   KADVFH+LSGMWKTP ERC
Sbjct: 1   RLLAELRAALNAHASDDELRSLVDKVLAHYDEYFRLKSAAAKADVFHLLSGMWKTPAERC 60

Query: 214 FMWLGGFRSSELLKVIGNH 232
           F+W+GGFR SELLK++ + 
Sbjct: 61  FLWIGGFRPSELLKLLYSL 79

This family of plant proteins appears to be a highly specific controller seed dormancy. Length = 79

>gnl|CDD|197664 smart00338, BRLZ, basic region leucin zipper

 Score = 57.6 bits (140), Expect = 4e-11
 Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 11/60 (18%)

Query: 69  DQKALRRLAQNREAARKSRLRKKAYVQQL---------ENSRLR--LAQLEQELQRARQQ 117
           D+K  RR  +NREAAR+SR RKKA +++L         EN RL+  + +L +EL++ + +
Sbjct: 3   DEKRRRRRERNREAARRSRERKKAEIEELERKVEQLEAENERLKKEIERLRRELEKLKSE 62

Length = 65

>gnl|CDD|201054 pfam00170, bZIP_1, bZIP transcription factor

 Score = 51.9 bits (125), Expect = 4e-09
 Identities = 22/40 (55%), Positives = 30/40 (75%), Gaps = 3/40 (7%)

Query: 71  KALRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQE 110
           K  RR  +NREAAR+SRLRKKAY+++LE    ++ +LE E
Sbjct: 5   KRERRRQKNREAARRSRLRKKAYIEELEE---KVKELEAE 41

The Pfam entry includes the basic region and the leucine zipper region. Length = 64

>gnl|CDD|203738 pfam07716, bZIP_2, Basic region leucine zipper

 Score = 43.4 bits (103), Expect = 3e-06
 Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 4/49 (8%)

Query: 69  DQKALRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQRARQQ 117
           D+   RR  +N EAAR+SR +KK   ++LE    R+ +LE+E  + RQ+
Sbjct: 3   DEYRDRRR-RNNEAARRSREKKKQREEELEE---RVKELEEENAQLRQK 47

Length = 54

>gnl|CDD|213400 cd12193, B_zip1, basic leucine zipper DNA-binding and multimerization region of GCN4 and related proteins

 Score = 39.2 bits (92), Expect = 9e-05
 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 4/51 (7%)

Query: 71  KALRRLAQNREAARKSRLRKKAYVQQLE-NSRLRLAQ---LEQELQRARQQ 117
              R+ A+NREAAR+SR RK   ++QLE       ++   LE E+ R ++ 
Sbjct: 2   PRARKRARNREAARRSRARKMERMKQLEDKVEELTSENSDLEDEVDRLKKA 52

Basic leucine zipper (bZIP) transcription factors act in networks of homo- and hetero-dimers in the regulation in a diverse set of cellular pathways. Classical leucine zippers have alpha helices with leucine residues 7 amino acids apart, which stabilize dimerization with a parallel leucine zipper domain. Dimerization creates a pair of basic regions that bind DNA and undergo conformational change. GCN4 was identified in Saccharomyces cerevisiae from mutations in a deficiency in activation with the general amino acid control pathway. GCN4 encodes a trans-activator of amino acid biosynthetic genes containing 2 acidic activation domains and a C-terminal bZIP domain, comprised of a basic alpha-helical DNA-binding region and a coiled-coil dimerization region. Length = 54

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	357
PF14144	80	DOG1: Seed dormancy control	100.0
KOG3584	348	consensus cAMP response element binding protein an	98.52
smart00338	65	BRLZ basic region leucin zipper.	98.4
PF00170	64	bZIP_1: bZIP transcription factor cAMP response el	98.38
PF07716	54	bZIP_2: Basic region leucine zipper; InterPro: IPR	98.28
PF13801	125	Metal_resist: Heavy-metal resistance; PDB: 3EPV_C	96.85
COG3678	160	CpxP P pilus assembly/Cpx signaling pathway, perip	96.78
KOG4343	655	consensus bZIP transcription factor ATF6 [Transcri	96.6
KOG0709	472	consensus CREB/ATF family transcription factor [Tr	96.22
PF03131	92	bZIP_Maf: bZIP Maf transcription factor; InterPro:	95.86
PRK12750	170	cpxP periplasmic repressor CpxP; Reviewed	95.13
KOG0837	279	consensus Transcriptional activator of the JUN fam	93.36
PRK10455	161	periplasmic protein; Reviewed	92.52
PRK12751	162	cpxP periplasmic stress adaptor protein CpxP; Revi	91.81
PRK10363	166	cpxP periplasmic repressor CpxP; Reviewed	91.36
PF07813	100	LTXXQ: LTXXQ motif family protein; InterPro: IPR01	86.57
KOG4005	292	consensus Transcription factor XBP-1 [Transcriptio	84.95

>PF14144 DOG1: Seed dormancy control

Probab=100.00  E-value=1.1e-34  Score=232.68  Aligned_cols=79  Identities=54%  Similarity=1.028  Sum_probs=76.6

Q ss_pred             hHHHHHHHHhhcCC-CchhHHHHHHHHHHhHHHHHHhhhhccccchhhhccCCCCchhHHHHhhhcCCCchHHHHHHhhc
Q 018357          154 RLINDLRSAVNSSM-GDNELRHLVDGVMAHYEEVFQLKSIGTKADVFHMLSGMWKTPVERCFMWLGGFRSSELLKVIGNH  232 (357)
Q Consensus       154 r~l~eLR~AL~s~~-~D~eLr~LVd~~~~HY~eyf~~Ks~aAk~DVf~llsg~W~TplER~FLWiGGfRPS~llkLL~~~  232 (357)
                      |+|.|||+|+++|. +|++|+.||++||+||++||++|+.||++|||++|+|+|+||+||||+||||||||++||||+++
T Consensus         1 ~~l~eLr~al~~~~~~~~~L~~lV~~~~~Hy~~y~~~K~~aa~~DV~~~~s~~W~sp~Er~flWiGG~RPS~~~~ll~s~   80 (80)
T PF14144_consen    1 RQLNELRAALQSHADSDDELRSLVDKVMSHYDEYYRAKSAAAKADVFHLLSPPWKSPLERCFLWIGGWRPSELFKLLYSQ   80 (80)
T ss_pred             CcHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHhCCCCCCHHHHHHHHHhcCCHHHHHHHHhcC
Confidence            57999999999998 89999999999999999999999999999999999999999999999999999999999999874

>KOG3584 consensus cAMP response element binding protein and related transcription factors [Transcription]

Probab=98.52  E-value=8.2e-08  Score=93.43  Aligned_cols=34  Identities=53%  Similarity=0.609  Sum_probs=30.3

Q ss_pred             HHHHHHHhhHHHHHHhhhhHHHHHHHHHHHHHHH
Q 018357           71 KALRRLAQNREAARKSRLRKKAYVQQLENSRLRL  104 (357)
Q Consensus        71 ~~~~rl~~nreaar~sr~rkk~y~~~le~sr~~l  104 (357)
                      |..-||.+||||||.||++||.||+||||+..-|
T Consensus       291 KRevRLmKNREAARECRRKKKEYVKCLENRVAVL  324 (348)
T KOG3584|consen  291 KREVRLMKNREAARECRRKKKEYVKCLENRVAVL  324 (348)
T ss_pred             HHHHHHHhhHHHHHHHHHhHhHHHHHHHhHHHHH
Confidence            5556999999999999999999999999986555

>smart00338 BRLZ basic region leucin zipper

Probab=98.40  E-value=1.1e-06  Score=67.34  Aligned_cols=43  Identities=47%  Similarity=0.574  Sum_probs=35.1

Q ss_pred             cHHHHHHHHhhHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 018357           69 DQKALRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQEL  111 (357)
Q Consensus        69 ~~~~~~rl~~nreaar~sr~rkk~y~~~le~sr~~l~qleqel  111 (357)
                      |+|..+|+.+||+||++||.|||.|++.||.....|.....+|
T Consensus         3 ~~k~~rR~~rNR~aA~~~R~rKk~~~~~Le~~~~~L~~en~~L   45 (65)
T smart00338        3 DEKRRRRRERNREAARRSRERKKAEIEELERKVEQLEAENERL   45 (65)
T ss_pred             cHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            7799999999999999999999999999998744444333333

>PF00170 bZIP_1: bZIP transcription factor cAMP response element binding (CREB) protein signature fos transforming protein signature jun transcription factor signature; InterPro: IPR011616 The basic-leucine zipper (bZIP) transcription factors [, ] of eukaryotic are proteins that contain a basic region mediating sequence-specific DNA-binding followed by a leucine zipper region (see IPR002158 from INTERPRO) required for dimerization

Probab=98.38  E-value=8.2e-07  Score=67.91  Aligned_cols=42  Identities=48%  Similarity=0.680  Sum_probs=34.1

Q ss_pred             HHHHHHHHhhHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018357           70 QKALRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQRA  114 (357)
Q Consensus        70 ~~~~~rl~~nreaar~sr~rkk~y~~~le~sr~~l~qleqel~~a  114 (357)
                      .+..+|+.+||+|||+||.|||+|+++||..   +..|+.+....
T Consensus         4 ~k~~~rr~rNR~AAr~~R~RKk~~~~~Le~~---~~~L~~en~~L   45 (64)
T PF00170_consen    4 DKRERRRERNREAARRSRQRKKQYIEELEEK---VEELESENEEL   45 (64)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH---HHHHHHHHHHH
Confidence            4678899999999999999999999999997   55555554443

; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0046983 protein dimerization activity, 0006355 regulation of transcription, DNA-dependent; PDB: 2H7H_B 2OQQ_B 1S9K_E 1JNM_A 1JUN_A 1FOS_H 1A02_J 1T2K_C 1CI6_A 1DH3_C ....

>PF07716 bZIP_2: Basic region leucine zipper; InterPro: IPR011700 The basic-leucine zipper (bZIP) transcription factors [, ] of eukaryotes are proteins that contain a basic region mediating sequence-specific DNA-binding, followed by a leucine zipper region (see IPR002158 from INTERPRO), which is required for dimerization

Probab=98.28  E-value=2.7e-06  Score=63.31  Aligned_cols=44  Identities=48%  Similarity=0.634  Sum_probs=36.7

Q ss_pred             cHHHHHHHHhhHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018357           69 DQKALRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQRARQ  116 (357)
Q Consensus        69 ~~~~~~rl~~nreaar~sr~rkk~y~~~le~sr~~l~qleqel~~ar~  116 (357)
                      |++..+|. +||+||++||-|||.|++.||..   +.+|+.+....++
T Consensus         3 ~~~~~rR~-rNr~AA~r~R~rkk~~~~~le~~---~~~L~~en~~L~~   46 (54)
T PF07716_consen    3 EEKRERRE-RNREAARRSRQRKKQREEELEQE---VQELEEENEQLRQ   46 (54)
T ss_dssp             HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHH
T ss_pred             HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHH
Confidence            67788999 99999999999999999999997   6666666555443

; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0046983 protein dimerization activity, 0006355 regulation of transcription, DNA-dependent; PDB: 1NWQ_A 1H89_B 1H88_A 1GTW_B 2E43_A 1IO4_A 1GU4_B 2E42_A 1H8A_B 1GU5_B ....

>PF13801 Metal_resist: Heavy-metal resistance; PDB: 3EPV_C 2Y3D_A 2Y3H_D 2Y3G_B 2Y3B_A 2Y39_A 3LAY_H

Probab=96.85  E-value=0.036  Score=44.82  Aligned_cols=85  Identities=24%  Similarity=0.215  Sum_probs=65.6

Q ss_pred             CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCchhhhHhHHHHHHHHHHHHHHHHHHHhHH
Q 018357          234 EPLTDQQLMGICNLQQSSQQAEDALSQGMEALQQSLVDTLSASSLGPTSSGNVADYMGQMALAMGKLATLENFIHQADLL  313 (357)
Q Consensus       234 epLTeqQl~~I~~Lqqst~qaEdaLsqgma~LQqslad~la~~~~g~~~~g~va~~~~qm~~Am~kl~~Le~fv~qAD~L  313 (357)
                      -+||++|...|..+.......-..+.+.+......+...+.+..+      |.    +.+..   .++.+...-.+....
T Consensus        40 l~Lt~eQ~~~l~~~~~~~~~~~~~~r~~~~~~r~~l~~ll~~~~~------D~----~~i~a---~~~~~~~~~~~l~~~  106 (125)
T PF13801_consen   40 LNLTPEQQAKLRALMDEFRQEMRALRQELRAARQELRALLAAPPP------DE----AAIEA---LLEEIREAQAELRQE  106 (125)
T ss_dssp             S-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSSS-------H----HHHHH---HHHHHHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC------CH----HHHHH---HHHHHHHHHHHHHHH
Confidence            479999999999999999999999999999999999988865422      11    12222   334566666677789


Q ss_pred             HHHHHHHHHHhcCHHHHH
Q 018357          314 RQQTLQQMHRILTARQAA  331 (357)
Q Consensus       314 R~qTL~~m~~ILTprQAA  331 (357)
                      |.+++.++..+|||.|=+
T Consensus       107 ~~~~~~~~~~~LtpeQR~  124 (125)
T PF13801_consen  107 RLEHLLEIRAVLTPEQRA  124 (125)
T ss_dssp             HHHHHHHHHHTT-GGGHH
T ss_pred             HHHHHHHHHHcCCHHHhC
Confidence            999999999999999865

>COG3678 CpxP P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein [Intracellular trafficking and secretion / Cell motility and secretio / Signal transduction mechanisms / Inorganic ion transport and metabolism]

Probab=96.78  E-value=0.018  Score=52.28  Aligned_cols=109  Identities=23%  Similarity=0.280  Sum_probs=72.6

Q ss_pred             hhHHHHhhhcCCCchH---HHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCc
Q 018357          209 PVERCFMWLGGFRSSE---LLKVIGNHLEPLTDQQLMGICNLQQSSQQAEDALSQGMEALQQSLVDTLSASSLGPTSSGN  285 (357)
Q Consensus       209 plER~FLWiGGfRPS~---llkLL~~~LepLTeqQl~~I~~Lqqst~qaEdaLsqgma~LQqslad~la~~~~g~~~~g~  285 (357)
                      |+... +|.|+|-|=-   .++.|     +||+.|...|..+...-+   .++.+-+..-...+-+.+.++.+.      
T Consensus        34 ~~~~~-~~~g~~~~~~~~~~~~~l-----~lT~~Qrqqi~~i~~~~~---~a~~~~~~~~r~~l~~li~a~~~D------   98 (160)
T COG3678          34 PMADA-HHGGQFGPRHQGGMFKGL-----DLTRAQRQQIRDLMQAQR---RAQREQLRSKRRALHELIAADQFD------   98 (160)
T ss_pred             Ccccc-ccCCCCCccccccccccc-----cccHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHhcCCcC------
Confidence            44444 5888776653   23332     799999999988877666   344444444445555555543221      


Q ss_pred             hhhhHhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 018357          286 VADYMGQMALAMGKLATLENFIHQADLLRQQTLQQMHRILTARQAARALLVIND  339 (357)
Q Consensus       286 va~~~~qm~~Am~kl~~Le~fv~qAD~LR~qTL~~m~~ILTprQAArfLlAl~e  339 (357)
                      -       +.|-...+.++....+.+.+|.++-.+|..||||.|.+.|=--.++
T Consensus        99 ~-------aka~a~~~~m~~~~~~~~~~r~k~~~~m~~vLTPEQr~~l~~~~~~  145 (160)
T COG3678          99 E-------AKARAQAEKMENQRQALRELRVKSDNQMYQVLTPEQRAKLQELLAQ  145 (160)
T ss_pred             H-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence            1       1223456778888999999999999999999999999776544433

>KOG4343 consensus bZIP transcription factor ATF6 [Transcription]

Probab=96.60  E-value=0.0038  Score=65.74  Aligned_cols=45  Identities=40%  Similarity=0.552  Sum_probs=37.3

Q ss_pred             ccHHHHH---HHHhhHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018357           68 GDQKALR---RLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQRAR  115 (357)
Q Consensus        68 ~~~~~~~---rl~~nreaar~sr~rkk~y~~~le~sr~~l~qleqel~~ar  115 (357)
                      .|+|+++   |..+|||-|..||.|||.|++.||..   |..|++|-+..|
T Consensus       275 ~d~kv~krqQRmIKNResA~~SRkKKKEy~~~Le~r---Lq~ll~Ene~Lk  322 (655)
T KOG4343|consen  275 SDIKVLKRQQRMIKNRESACQSRKKKKEYMLGLEAR---LQALLSENEQLK  322 (655)
T ss_pred             cCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH
Confidence            4777754   88999999999999999999999987   777777665443

>KOG0709 consensus CREB/ATF family transcription factor [Transcription]

Probab=96.22  E-value=0.0047  Score=64.03  Aligned_cols=44  Identities=36%  Similarity=0.518  Sum_probs=35.2

Q ss_pred             HHHHHHHHhhHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 018357           70 QKALRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQR  113 (357)
Q Consensus        70 ~~~~~rl~~nreaar~sr~rkk~y~~~le~sr~~l~qleqel~~  113 (357)
                      =|..||..+|.+-|-.||.|||.||.+||.....-..=.|||++
T Consensus       250 LKrvRRKIrNK~SAQESRrkKkeYid~LE~rv~~~taeNqeL~k  293 (472)
T KOG0709|consen  250 LKRVRRKIRNKRSAQESRRKKKEYIDGLESRVSAFTAENQELQK  293 (472)
T ss_pred             HHHHHHHHHhhhhhHHHHHhHhhHHHHHhhhhhhcccCcHHHHH
Confidence            35679999999999999999999999999985544444445444

>PF03131 bZIP_Maf: bZIP Maf transcription factor; InterPro: IPR004826 There are several different types of Maf transcription factors with different roles in the cell

Probab=95.86  E-value=0.013  Score=48.14  Aligned_cols=32  Identities=34%  Similarity=0.378  Sum_probs=29.1

Q ss_pred             HHHHHHHHhhHHHHHHhhhhHHHHHHHHHHHH
Q 018357           70 QKALRRLAQNREAARKSRLRKKAYVQQLENSR  101 (357)
Q Consensus        70 ~~~~~rl~~nreaar~sr~rkk~y~~~le~sr  101 (357)
                      -|-.||..+||.||.+||.||+.++..||...
T Consensus        29 lK~~RRr~KNR~~A~~cR~rk~~~~~~Le~e~   60 (92)
T PF03131_consen   29 LKQRRRRLKNRGYAQNCRKRKLDQIEELEEEI   60 (92)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            36789999999999999999999999999873

MafG and MafH are small Mafs which lack a putative transactivation domain. They behave as transcriptional repressors when they dimerize among themselves. However they also serve as transcriptional activators by dimerizing with other (usually larger) basic-zipper proteins and recruiting them to specific DNA-binding sites. Maf transcription factors contain a conserved basic region leucine zipper (bZIP) domain, which mediates their dimerization and DNA binding property. Neural retina-specific leucine zipper proteins also belong to this family. Together with the basic region, the Maf extended homology region (EHR), conserved only within the Maf family, defines the DNA binding specific to Mafs. This structure enables Mafs to make a broader area of contact with DNA and to recognise longer DNA sequences. In particular, the two residues at the beginning of helix H2 are positioned to recognise the flanking region []. Small Maf proteins heterodimerize with Fos and may act as competitive repressors of the NF2-E2 transcription factor. In mouse, Maf1 may play an early role in axial patterning. Defects in these proteins are a cause of autosomal dominant retinitis pigmentosa. ; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 2KZ5_A 3A5T_A 1K1V_A 1SKN_P 2WT7_B 2WTY_B.

>PRK12750 cpxP periplasmic repressor CpxP; Reviewed

Probab=95.13  E-value=1.1  Score=41.11  Aligned_cols=96  Identities=18%  Similarity=0.130  Sum_probs=59.3

Q ss_pred             hcCCCChHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHhhhhhhccCCCCCCCchhhhHhHHHHHHHHHHH
Q 018357          231 NHLEPLTDQQLMGICNLQQSSQQAEDA--------LSQGMEALQQSLVDTLSASSLGPTSSGNVADYMGQMALAMGKLAT  302 (357)
Q Consensus       231 ~~LepLTeqQl~~I~~Lqqst~qaEda--------Lsqgma~LQqslad~la~~~~g~~~~g~va~~~~qm~~Am~kl~~  302 (357)
                      ..| +||++|...|..++...+.+=.+        ....|....+.+.+.+.++++.      .+    .+..+.++   
T Consensus        49 ~~L-~LTdeQk~qik~i~~~~r~~~k~~~~~~r~~~~~~m~a~~~~~~~Ll~a~~FD------ea----avral~~~---  114 (170)
T PRK12750         49 RQL-DLTDAQKEQLKEMREANRAEMKAKYSGNREQSHAEMKAHHAKVQALVLADDFD------EA----AANDLAKQ---  114 (170)
T ss_pred             hhC-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHhcCCCC------HH----HHHHHHHH---
Confidence            345 79999999999988776664333        4556666777777777655332      11    11111111   


Q ss_pred             HHHHHHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 018357          303 LENFIHQADLLRQQTLQQMHRILTARQAARALLVINDY  340 (357)
Q Consensus       303 Le~fv~qAD~LR~qTL~~m~~ILTprQAArfLlAl~ey  340 (357)
                      +..--.+.---|.++.+++..||||-|=+.|---..+.
T Consensus       115 ~~~~~~e~~v~~~~~~~~~~~vLTpEQRak~~e~~~~r  152 (170)
T PRK12750        115 MVEKQVERRVKMLEKRHQMLSILTPEQKAKFQELQQER  152 (170)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence            11111122223677899999999999999998765544

>KOG0837 consensus Transcriptional activator of the JUN family [Transcription]

Probab=93.36  E-value=0.17  Score=49.39  Aligned_cols=30  Identities=43%  Similarity=0.509  Sum_probs=24.2

Q ss_pred             HHHHHHHhhHHHHHHhhhhHHHHHHHHHHH
Q 018357           71 KALRRLAQNREAARKSRLRKKAYVQQLENS  100 (357)
Q Consensus        71 ~~~~rl~~nreaar~sr~rkk~y~~~le~s  100 (357)
                      |..|.-++|||||+|||.||---+.+||.-
T Consensus       206 kleRkrlrnreaa~Kcr~rkLdrisrLEdk  235 (279)
T KOG0837|consen  206 KLERKRLRNREAASKCRKRKLDRISRLEDK  235 (279)
T ss_pred             HHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence            345666789999999999998877777764

>PRK10455 periplasmic protein; Reviewed

Probab=92.52  E-value=1.9  Score=39.19  Aligned_cols=102  Identities=18%  Similarity=0.214  Sum_probs=57.6

Q ss_pred             HHHhhhcC---CCchHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhhhccCCCCCCCchh
Q 018357          212 RCFMWLGG---FRSSELLKVIGNHLEPLTDQQLMGICNLQQSSQQAEDALS-QGMEALQQSLVDTLSASSLGPTSSGNVA  287 (357)
Q Consensus       212 R~FLWiGG---fRPS~llkLL~~~LepLTeqQl~~I~~Lqqst~qaEdaLs-qgma~LQqslad~la~~~~g~~~~g~va  287 (357)
                      .+.+|-||   ..+..+|+    .| +||++|...|..+.+..+..-...+ +..+.++    +.+.++.+      +-+
T Consensus        35 ~~~~~~~~~~g~~~~~m~~----~L-~LT~~Qrqqir~im~~~r~~~~~~~~~~r~~l~----~li~ad~F------Dea   99 (161)
T PRK10455         35 KPMMHHKGKFGPHHDMMFK----GL-NLTDAQKQQIRDIMKAQRDQMKRPPLEERRAMH----DIIASDTF------DKA   99 (161)
T ss_pred             CccccCCCCCCchhhhhhh----hC-CCCHHHHHHHHHHHHHHHHhhccccHHHHHHHH----HHHccCcc------CHH
Confidence            33566553   44444443    34 7999999999998777665533332 2333333    23433322      111


Q ss_pred             hhHhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhcCHHHHHHHHH
Q 018357          288 DYMGQMALAMGKLATLENFIHQADLLRQQTLQQMHRILTARQAARALL  335 (357)
Q Consensus       288 ~~~~qm~~Am~kl~~Le~fv~qAD~LR~qTL~~m~~ILTprQAArfLl  335 (357)
                          .+...++++.   ..-.+.--.|.++-.+|..||||-|=+.|=-
T Consensus       100 ----avra~~~k~~---~~~~~~~~~~~~~~~qiy~vLTPEQr~q~~~  140 (161)
T PRK10455        100 ----KAEAQITKME---AQRKARMLAHMETQNKIYNVLTPEQKKQFNA  140 (161)
T ss_pred             ----HHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence                1222233332   2233333368889999999999999998753

>PRK12751 cpxP periplasmic stress adaptor protein CpxP; Reviewed

Probab=91.81  E-value=4.7  Score=36.86  Aligned_cols=100  Identities=18%  Similarity=0.187  Sum_probs=63.0

Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCchhhhHhHHHHHHHHHHHHHHHHHHHhHHH
Q 018357          235 PLTDQQLMGICNLQQSSQQAEDALSQGMEALQQSLVDTLSASSLGPTSSGNVADYMGQMALAMGKLATLENFIHQADLLR  314 (357)
Q Consensus       235 pLTeqQl~~I~~Lqqst~qaEdaLsqgma~LQqslad~la~~~~g~~~~g~va~~~~qm~~Am~kl~~Le~fv~qAD~LR  314 (357)
                      +||++|...|-.+....+.......  .+ .-+.+-+.+.++++.      .+    .+...+++.   ...-..---.+
T Consensus        56 ~LTd~QR~qmr~im~~~r~~~~~~~--~~-~~~~m~~Li~Ad~FD------ea----Avra~~~km---a~~~~e~~v~~  119 (162)
T PRK12751         56 NLTEQQRQQMRDLMRQSHQSQPRLD--LE-DREAMHKLITADKFD------EA----AVRAQAEKM---SQNQIERHVEM  119 (162)
T ss_pred             CCCHHHHHHHHHHHHHhhhcccchh--HH-HHHHHHHHHhcCCCC------HH----HHHHHHHHH---HHHHHHHHHHH
Confidence            7999999999998877776532111  11 223344455554332      11    122223332   22222222357


Q ss_pred             HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhhccc
Q 018357          315 QQTLQQMHRILTARQAARALLVINDYTSRLRALSSL  350 (357)
Q Consensus       315 ~qTL~~m~~ILTprQAArfLlAl~ey~~rLRalssl  350 (357)
                      .++.++|+.+|||-|-+.|=--.-+....+|.++.+
T Consensus       120 ~~~~~qmy~lLTPEQra~l~~~~e~r~~~~~~~~~~  155 (162)
T PRK12751        120 AKVRNQMYNLLTPEQKEALNKKHQERIEKLQQKPAA  155 (162)
T ss_pred             HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcccc
Confidence            788899999999999999998888888888887643

>PRK10363 cpxP periplasmic repressor CpxP; Reviewed

Probab=91.36  E-value=4.2  Score=37.51  Aligned_cols=96  Identities=20%  Similarity=0.255  Sum_probs=59.6

Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhhhccCCCCCCCchhhhHhHHHHHHHHHH--HHHHHHHHHh
Q 018357          235 PLTDQQLMGICNLQQSSQQAEDALS-QGMEALQQSLVDTLSASSLGPTSSGNVADYMGQMALAMGKLA--TLENFIHQAD  311 (357)
Q Consensus       235 pLTeqQl~~I~~Lqqst~qaEdaLs-qgma~LQqslad~la~~~~g~~~~g~va~~~~qm~~Am~kl~--~Le~fv~qAD  311 (357)
                      +||++|...|..|.+.-+.+...++ .+++.++    +.+.++.+      |-+    .+....+|+.  ..+.-|    
T Consensus        50 dLTdaQRqQmRdLm~~~r~~~~~~~~~er~amh----~LI~ad~F------DEa----avra~a~kma~~~~e~~V----  111 (166)
T PRK10363         50 SLTEHQRQQMRDLMQQARHEQPPVNVSEMETMH----RLVTAENF------DEN----AVRAQAEKMAQEQVARQV----  111 (166)
T ss_pred             CCCHHHHHHHHHHHHHHHhcccccCHHHHHHHH----HHHhcCCC------CHH----HHHHHHHHHHHHHHHHHH----
Confidence            7999999999999988876654443 2444444    33333322      211    1222233332  122222    


Q ss_pred             HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhhcc
Q 018357          312 LLRQQTLQQMHRILTARQAARALLVINDYTSRLRALSS  349 (357)
Q Consensus       312 ~LR~qTL~~m~~ILTprQAArfLlAl~ey~~rLRalss  349 (357)
                       -|.++-++|..||||-|-+.|=--.-+....+|.++.
T Consensus       112 -em~k~~nqmy~lLTPEQKaq~~~~~~~rm~~~~~~~~  148 (166)
T PRK10363        112 -EMAKVRNQMYRLLTPEQQAVLNEKHQQRMEQLRDVTQ  148 (166)
T ss_pred             -HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence             3667888999999999999996666666666677654

>PF07813 LTXXQ: LTXXQ motif family protein; InterPro: IPR012899 This five residue motif is found in a number of bacterial proteins bearing similarity to the protein CpxP (P32158 from SWISSPROT)

Probab=86.57  E-value=4.3  Score=32.13  Aligned_cols=86  Identities=22%  Similarity=0.193  Sum_probs=44.4

Q ss_pred             hcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCchhhhHhHHHHHHHHHHHHHHHHHHH
Q 018357          231 NHLEPLTDQQLMGICNLQQSSQQAEDALSQGMEALQQSLVDTLSASSLGPTSSGNVADYMGQMALAMGKLATLENFIHQA  310 (357)
Q Consensus       231 ~~LepLTeqQl~~I~~Lqqst~qaEdaLsqgma~LQqslad~la~~~~g~~~~g~va~~~~qm~~Am~kl~~Le~fv~qA  310 (357)
                      ..| +||++|...|..+....+..-..+....+.+.. +-+    .      +.+.+. .    .++.+.+.+...-.+.
T Consensus        11 ~~L-~LT~eQ~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~----~------~~~~~~-~----~~~~~~~~~~~~~~~~   73 (100)
T PF07813_consen   11 EEL-NLTDEQKAKWRAIRQAMKAKMKPLKAMREQLRA-LRD----P------SFDEAA-P----EALAAMAEMMELRAEM   73 (100)
T ss_dssp             TTS---THHHHHHHHHHHHHHCTTS------HHHHHH-HHH----S------S--HHH-H----HHHH--HHCHHHHHHH
T ss_pred             hhC-CCCHHHHHHHHHHHHHHHHHHHhhcccHHHHHH-hcc----c------cCChhH-H----HHHHHHHHHHHHHHHH
Confidence            344 699999999999888877666666111111111 111    0      011110 0    1112223444445555


Q ss_pred             hHHHHHHHHHHHHhcCHHHHHHH
Q 018357          311 DLLRQQTLQQMHRILTARQAARA  333 (357)
Q Consensus       311 D~LR~qTL~~m~~ILTprQAArf  333 (357)
                      -..|..+...+..||||-|=+.|
T Consensus        74 ~~~~~~~~~~~~~vLt~eQk~~~   96 (100)
T PF07813_consen   74 MEERAKAQHALYAVLTPEQKEKF   96 (100)
T ss_dssp             HHHHHHHHHHHHTTS-HHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCHHHHHHH
Confidence            56678889999999999998776

This is a periplasmic protein that aids in combating extracytoplasmic protein-mediated toxicity, and may also be involved in the response to alkaline pH []. Another member of this family, Spy (P77754 from SWISSPROT) is also a periplasmic protein that may be involved in the response to stress []. The homology between CpxP and Spy may indicate that these two proteins are functionally related []. The motif is found repeated twice in many members of this entry. ; GO: 0042597 periplasmic space; PDB: 3ITF_B 3QZC_B 3OEO_D 3O39_A.

>KOG4005 consensus Transcription factor XBP-1 [Transcription]

Probab=84.95  E-value=4  Score=39.90  Aligned_cols=32  Identities=41%  Similarity=0.526  Sum_probs=29.1

Q ss_pred             cHHHHHHHHhhHHHHHHhhhhHHHHHHHHHHH
Q 018357           69 DQKALRRLAQNREAARKSRLRKKAYVQQLENS  100 (357)
Q Consensus        69 ~~~~~~rl~~nreaar~sr~rkk~y~~~le~s  100 (357)
                      ..|++||--+||-||..+|=||||-...+|--
T Consensus        67 EEK~~RrKLKNRVAAQtaRDrKKaRm~eme~~   98 (292)
T KOG4005|consen   67 EEKVQRRKLKNRVAAQTARDRKKARMEEMEYE   98 (292)
T ss_pred             HHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Confidence            67999999999999999999999988888765

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	357
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-06
1dh3_A	55	Transcription factor CREB; protein-DNA complex, tr	2e-09
1t2k_D	61	Cyclic-AMP-dependent transcription factor ATF-2; p	2e-08
1jnm_A	62	Proto-oncogene C-JUN; BZIP, protein-DNA complex, t	2e-08
2dgc_A	63	Protein (GCN4); basic domain, leucine zipper, DNA	7e-07
2wt7_A	63	Proto-oncogene protein C-FOS; transcription, trans	2e-06
1ci6_A	63	Transcription factor ATF-4; BZIP; 2.60A {Homo sapi	2e-06
1gd2_E	70	Transcription factor PAP1; basic leucine zipper, p	2e-05
3a5t_A	107	Transcription factor MAFG; protein-DNA complex, BZ	5e-05
1hjb_A	87	Ccaat/enhancer binding protein beta; transcription	5e-05
2wt7_B	90	Transcription factor MAFB; transcription, transcri	1e-04
1gu4_A	78	CAAT/enhancer binding protein beta; transcription/	3e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 61.0 bits (147), Expect = 3e-10
 Identities = 54/381 (14%), Positives = 123/381 (32%), Gaps = 76/381 (19%)

Query: 25  IGDNSQQTDTSTDVD--TDDKNQVNGVRRGVPIVTGSME---QSKIKTGDQKALRRLAQN 79
           + D  +   +  ++D     K+ V+G  R    +    E   Q  ++   +   + L   
Sbjct: 38  VQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSP 97

Query: 80  -REAARKSRLRKKAYVQQLEN-------------SRLRL-AQLEQELQRARQQGIFIATG 124
            +   R+  +  + Y++Q +              SRL+   +L Q L   R     +  G
Sbjct: 98  IKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG 157

Query: 125 VSGDIGHSV-AGNGVLAFDL-----DYVHWV-----DEHQRLINDLRSAVNSSMGDNELR 173
           V G  G +  A +  L++ +       + W+     +  + ++  L           +L 
Sbjct: 158 VLG-SGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEML----------QKLL 206

Query: 174 HLVDGVMAHYEEVFQLKSIGTKA-DVFHMLSGMWKTPV-ERCFMWLGGFRSSELLKVIGN 231
           + +D             +I  +   +   L  + K+   E C + L   ++++       
Sbjct: 207 YQIDPNWT--SRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNL 264

Query: 232 H---LEPLT--DQQLMGICNLQQSSQQAEDALSQGMEALQQSLVDTLSASSLG--PTSSG 284
               L  LT   +Q+    +   ++  + D  S  +    +    +L    L   P    
Sbjct: 265 SCKIL--LTTRFKQVTDFLSAATTTHISLDHHSMTLT-PDEVK--SLLLKYLDCRPQDLP 319

Query: 285 NVADYMGQMALAM-GKLATLENFIHQADLLRQQTLQQMHRILTA----------RQAARA 333
                     L++     ++ + +   D  +     ++  I+ +          R+    
Sbjct: 320 REVLTTNPRRLSIIA--ESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDR 377

Query: 334 LLVIND---YTSRLRALSSLW 351
           L V        + L  LS +W
Sbjct: 378 LSVFPPSAHIPTIL--LSLIW 396

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.8 bits (110), Expect = 8e-06
 Identities = 35/245 (14%), Positives = 71/245 (28%), Gaps = 79/245 (32%)

Query: 170 NELRHLVDGVMAHYEEVF-----------QLKSIGTKADVFHMLSGMWKTPVERCFMWLG 218
            E ++    +++ +E+ F             KSI +K ++ H++    K  V        
Sbjct: 12  GEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMS--KDAVSGTLRLFW 69

Query: 219 GFRS--SELLKV-IGNHLEP----LTDQ-----------------QLMGICNLQQ----- 249
              S   E+++  +   L      L                    Q   + N  Q     
Sbjct: 70  TLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKY 129

Query: 250 --SSQQAEDALSQGMEALQ---------------QSLV-DTLSASSLGPTSSGNVADY-- 289
             S  Q    L Q +  L+                 +  D   +  +       +  +  
Sbjct: 130 NVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKI--FWL 187

Query: 290 -MGQMALAMGKLATLENFIHQADL-------------LRQQTLQQ-MHRILTARQAARAL 334
            +         L  L+  ++Q D              LR  ++Q  + R+L ++     L
Sbjct: 188 NLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCL 247

Query: 335 LVIND 339
           LV+ +
Sbjct: 248 LVLLN 252

>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1 Length = 55

 Score = 52.4 bits (126), Expect = 2e-09
 Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 3/47 (6%)

Query: 71  KALRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQRARQQ 117
           K   RL +NREAAR+SR +KK YV+ LEN   R+A LE + +   ++
Sbjct: 1   KREVRLMKNREAARESRRKKKEYVKSLEN---RVAVLENQNKTLIEE 44

>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1 Length = 61

 Score = 49.6 bits (119), Expect = 2e-08
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 11/58 (18%)

Query: 71  KALRRLAQNREAARKSRLRKKAYVQQLE---------NSRLR--LAQLEQELQRARQQ 117
           K  + L +NR AA +SR ++K +VQ LE         N +L+  +  L  E+ + +Q 
Sbjct: 1   KRRKFLERNRAAASRSRQKRKVWVQSLEKKAEDLSSLNGQLQSEVTLLRNEVAQLKQL 58

>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A Length = 62

 Score = 49.3 bits (118), Expect = 2e-08
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 11/58 (18%)

Query: 71  KALRRLAQNREAARKSRLRKKAYVQQLE---------NSRLR--LAQLEQELQRARQQ 117
           KA R+  +NR AA KSR RK   + +LE         NS L      L +++ + +Q+
Sbjct: 1   KAERKRMRNRIAASKSRKRKLERIARLEEKVKTLKAQNSELASTANMLREQVAQLKQK 58

>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D Length = 63

 Score = 45.2 bits (107), Expect = 7e-07
 Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 4/52 (7%)

Query: 66  KTGDQKALRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQRARQQ 117
           ++ D  AL+R A+N EAAR+SR RK   ++QLE+   ++ +L  +      +
Sbjct: 5   ESSDPAALKR-ARNTEAARRSRARKLQRMKQLED---KVEELLSKNYHLENE 52

>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D Length = 63

 Score = 44.0 bits (104), Expect = 2e-06
 Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 11/59 (18%)

Query: 70  QKALRRLAQNREAARKSRLRKKAYVQQL---------ENSRLR--LAQLEQELQRARQQ 117
           +K   R  +N+ AA K R R++     L         E S L+  +A L +E ++    
Sbjct: 1   EKRRIRRERNKMAAAKCRNRRRELTDTLQAETDQLEDEKSALQTEIANLLKEKEKLEFI 59

>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1 Length = 63

 Score = 43.5 bits (103), Expect = 2e-06
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 11/57 (19%)

Query: 71  KALRRLAQNREAARKSRLRKKAYVQQLE---------NSRLR--LAQLEQELQRARQ 116
           K L+++ QN+ AA + R +K+A  + L          N  L+     L +E+Q  + 
Sbjct: 2   KKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKERADSLAKEIQYLKD 58

>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1 Length = 70

 Score = 40.8 bits (95), Expect = 2e-05
 Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 3/49 (6%)

Query: 69  DQKALRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQRARQQ 117
            + + +R AQNR A R  R RK+ +++ LE    ++  L++       +
Sbjct: 6   QEPSSKRKAQNRAAQRAFRKRKEDHLKALET---QVVTLKELHSSTTLE 51

>3a5t_A Transcription factor MAFG; protein-DNA complex, BZIP factor, acetylation, DNA-binding, isopeptide bond, nucleus; 2.80A {Mus musculus} Length = 107

 Score = 41.2 bits (96), Expect = 5e-05
 Identities = 12/49 (24%), Positives = 21/49 (42%)

Query: 69  DQKALRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQRARQQ 117
             K  RR  +NR  A   R+++    ++LE  +  L Q  ++L      
Sbjct: 35  QLKQRRRTLKNRGYAASCRVKRVTQKEELEKQKAELQQEVEKLASENAS 83

>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1 Length = 87

 Score = 40.4 bits (94), Expect = 5e-05
 Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 11/66 (16%)

Query: 62  QSKIKTGDQKALRRLAQNREAARKSRLRKKAYVQQL---------ENSRLR--LAQLEQE 110
           +  +     +   R  +N  A RKSR + K    +          EN RL+  + QL +E
Sbjct: 6   KKTVDKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSRE 65

Query: 111 LQRARQ 116
           L   R 
Sbjct: 66  LSTLRN 71

>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A Length = 90

 Score = 40.0 bits (93), Expect = 1e-04
 Identities = 13/47 (27%), Positives = 24/47 (51%)

Query: 71  KALRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQRARQQ 117
           K  RR  +NR  A+  R ++      LEN + +L Q  ++L++   +
Sbjct: 27  KQKRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVSR 73

>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A Length = 78

 Score = 38.0 bits (88), Expect = 3e-04
 Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 11/66 (16%)

Query: 62  QSKIKTGDQKALRRLAQNREAARKSRLRKKAYVQQL---------ENSRLR--LAQLEQE 110
           +  +     +   R  +N  A RKSR + K    +          EN RL+  + QL +E
Sbjct: 6   KKTVDKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSRE 65

Query: 111 LQRARQ 116
           L   R 
Sbjct: 66  LSTLRN 71

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	357
1dh3_A	55	Transcription factor CREB; protein-DNA complex, tr	98.81
2dgc_A	63	Protein (GCN4); basic domain, leucine zipper, DNA	98.31
2wt7_A	63	Proto-oncogene protein C-FOS; transcription, trans	98.06
1t2k_D	61	Cyclic-AMP-dependent transcription factor ATF-2; p	98.03
1jnm_A	62	Proto-oncogene C-JUN; BZIP, protein-DNA complex, t	98.02
1gd2_E	70	Transcription factor PAP1; basic leucine zipper, p	97.43
2y39_A	118	Nickel and cobalt resistance protein CNRR; metal b	97.29
1ci6_A	63	Transcription factor ATF-4; BZIP; 2.60A {Homo sapi	96.6
3a5t_A	107	Transcription factor MAFG; protein-DNA complex, BZ	95.35
3itf_A	145	Periplasmic adaptor protein CPXP; CPXR, CPXA, cpxr	94.69
1gu4_A	78	CAAT/enhancer binding protein beta; transcription/	94.51
1hjb_A	87	Ccaat/enhancer binding protein beta; transcription	93.73
2wt7_B	90	Transcription factor MAFB; transcription, transcri	89.93
1skn_P	92	DNA-binding domain of SKN-1; complex (transcriptio	87.63
3oeo_A	138	Spheroplast protein Y; LTXXQ, extracytoplasmic str	86.79
3o39_A	108	Periplasmic protein related to spheroblast format;	85.13
3lay_A	175	Zinc resistance-associated protein; salmonella typ	82.31

>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1

Probab=98.81  E-value=6.2e-09  Score=77.36  Aligned_cols=44  Identities=48%  Similarity=0.597  Sum_probs=38.9

Q ss_pred             HHHHHHHhhHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 018357           71 KALRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQRARQQ  117 (357)
Q Consensus        71 ~~~~rl~~nreaar~sr~rkk~y~~~le~sr~~l~qleqel~~ar~q  117 (357)
                      |..+|+..|||+|+.||.|||+||+.||..   +.+|+.|-...+.|
T Consensus         1 kr~rR~~~NResA~rSR~RKk~~~~~LE~~---v~~L~~eN~~L~~~   44 (55)
T 1dh3_A            1 KREVRLMKNREAARESRRKKKEYVKSLENR---VAVLENQNKTLIEE   44 (55)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH
T ss_pred             ChHHHHHhhHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH
Confidence            357899999999999999999999999997   78888888777654

>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D

Probab=98.31  E-value=9.1e-07  Score=67.35  Aligned_cols=47  Identities=40%  Similarity=0.477  Sum_probs=32.4

Q ss_pred             cHHHHHHHHhhHHHHHHhhhhHHHHHHHHHHHHHHH----HHHHHHHHHHH
Q 018357           69 DQKALRRLAQNREAARKSRLRKKAYVQQLENSRLRL----AQLEQELQRAR  115 (357)
Q Consensus        69 ~~~~~~rl~~nreaar~sr~rkk~y~~~le~sr~~l----~qleqel~~ar  115 (357)
                      +++..++-++||||||+||.||++|+..||.....|    ..|+.|+...+
T Consensus         7 ~d~~~~KR~rNreAArrsR~RK~~~~~~Le~~v~~L~~eN~~L~~ev~~Lr   57 (63)
T 2dgc_A            7 SDPAALKRARNTEAARRSRARKLQRMKQLEDKVEELLSKNYHLENEVARLK   57 (63)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            445667778899999999999999999999874443    33444444444

>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D

Probab=98.06  E-value=9.1e-06  Score=61.52  Aligned_cols=36  Identities=28%  Similarity=0.321  Sum_probs=31.5

Q ss_pred             HHHHHHHhhHHHHHHhhhhHHHHHHHHHHHHHHHHH
Q 018357           71 KALRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQ  106 (357)
Q Consensus        71 ~~~~rl~~nreaar~sr~rkk~y~~~le~sr~~l~q  106 (357)
                      |-.+|+-.||+||++||.|||.|++.||...-.|..
T Consensus         2 kr~rrrerNR~AA~rcR~rKk~~~~~Le~~v~~L~~   37 (63)
T 2wt7_A            2 KRRIRRERNKMAAAKCRNRRRELTDTLQAETDQLED   37 (63)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            567899999999999999999999999998555544

>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1

Probab=98.03  E-value=8e-06  Score=61.25  Aligned_cols=34  Identities=38%  Similarity=0.514  Sum_probs=29.6

Q ss_pred             HHHHHHhhHHHHHHhhhhHHHHHHHHHHHHHHHH
Q 018357           72 ALRRLAQNREAARKSRLRKKAYVQQLENSRLRLA  105 (357)
Q Consensus        72 ~~~rl~~nreaar~sr~rkk~y~~~le~sr~~l~  105 (357)
                      -.+|+..||+||.+||.|||.|+++||...-.|.
T Consensus         2 R~~r~erNr~AA~k~R~rKk~~~~~Le~~~~~L~   35 (61)
T 1t2k_D            2 RRKFLERNRAAASRSRQKRKVWVQSLEKKAEDLS   35 (61)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4689999999999999999999999998754443

>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A

Probab=98.02  E-value=8.6e-06  Score=61.33  Aligned_cols=36  Identities=42%  Similarity=0.402  Sum_probs=30.7

Q ss_pred             HHHHHHHhhHHHHHHhhhhHHHHHHHHHHHHHHHHH
Q 018357           71 KALRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQ  106 (357)
Q Consensus        71 ~~~~rl~~nreaar~sr~rkk~y~~~le~sr~~l~q  106 (357)
                      |..||..+||+||++||.|||.|++.||...-.|..
T Consensus         1 K~errr~rNr~AA~k~R~rKk~~~~~Le~~v~~L~~   36 (62)
T 1jnm_A            1 KAERKRMRNRIAASKSRKRKLERIARLEEKVKTLKA   36 (62)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            356889999999999999999999999997555543

>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1

Probab=97.43  E-value=0.00016  Score=56.20  Aligned_cols=38  Identities=34%  Similarity=0.409  Sum_probs=31.9

Q ss_pred             HHHHHHhhHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 018357           72 ALRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQ  112 (357)
Q Consensus        72 ~~~rl~~nreaar~sr~rkk~y~~~le~sr~~l~qleqel~  112 (357)
                      ..+|-+|||+|+|-.|-||++||..||.-   +.+||.+.+
T Consensus         9 ~~kR~~qNR~AQRafReRK~~~i~~LE~~---v~~le~~~~   46 (70)
T 1gd2_E            9 SSKRKAQNRAAQRAFRKRKEDHLKALETQ---VVTLKELHS   46 (70)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHH
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHH
Confidence            46889999999999999999999999986   555655444

>2y39_A Nickel and cobalt resistance protein CNRR; metal binding protein; 1.41A {Cupriavidus metallidurans} PDB: 2y3b_A 2y3d_A 2y3g_A* 2y3h_A 3epv_A*

Probab=97.29  E-value=0.0057  Score=51.91  Aligned_cols=101  Identities=15%  Similarity=0.166  Sum_probs=75.8

Q ss_pred             hHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCchhhhHhHHHHHHHHHHH
Q 018357          223 SELLKVIGNHLEPLTDQQLMGICNLQQSSQQAEDALSQGMEALQQSLVDTLSASSLGPTSSGNVADYMGQMALAMGKLAT  302 (357)
Q Consensus       223 S~llkLL~~~LepLTeqQl~~I~~Lqqst~qaEdaLsqgma~LQqslad~la~~~~g~~~~g~va~~~~qm~~Am~kl~~  302 (357)
                      +.+=.+|...| +||++|...|..+...-.....+|.++|...-.-|++.+....          .|..++..|++.   
T Consensus         9 ~~lH~~vh~~L-~Lt~~Q~~~leaie~~fa~~r~~le~emRaan~~La~ai~~~~----------~~~p~V~aaid~---   74 (118)
T 2y39_A            9 GDLHEILHEAV-PLDANEREILELKEDAFAQRRREIETRLRAANGKLADAIAKNP----------AWSPEVEAATQE---   74 (118)
T ss_dssp             CCHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC----------SCCHHHHHHHHH---
T ss_pred             CchHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----------ccCHHHHHHHHH---
Confidence            33444566677 7999999999999999999999999999999999999986431          133344444433   


Q ss_pred             HHHHHHHHhHHHHHH---HHHHHHhcCHHHHHHHHHHHHHH
Q 018357          303 LENFIHQADLLRQQT---LQQMHRILTARQAARALLVINDY  340 (357)
Q Consensus       303 Le~fv~qAD~LR~qT---L~~m~~ILTprQAArfLlAl~ey  340 (357)
                         |-...-.|+..|   +-+|..||||-|+.+|=-.+.+-
T Consensus        75 ---~h~~mG~LQkeTi~HvfeMR~VLtPeQ~~~fd~~vv~a  112 (118)
T 2y39_A           75 ---VERAAGDLQRATLVHVFEMRAGLKPEHRPAYDRVLIDA  112 (118)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence               333445588888   66789999999999997666543

>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1

Probab=96.60  E-value=0.0023  Score=48.39  Aligned_cols=35  Identities=31%  Similarity=0.434  Sum_probs=25.3

Q ss_pred             HHHHHHHhhHHHHHHhhhhHHHHHHHHHHHHHHHH
Q 018357           71 KALRRLAQNREAARKSRLRKKAYVQQLENSRLRLA  105 (357)
Q Consensus        71 ~~~~rl~~nreaar~sr~rkk~y~~~le~sr~~l~  105 (357)
                      |-.++.-+||.||.+||.|||.+++.||..--.|.
T Consensus         2 k~~rKr~rNr~AA~R~R~KKk~~~~~le~~~~~L~   36 (63)
T 1ci6_A            2 KKLKKMEQNKTAATRYRQKKRAEQEALTGECKELE   36 (63)
T ss_dssp             ------CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chHhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34677889999999999999999999998744443

>3a5t_A Transcription factor MAFG; protein-DNA complex, BZIP factor, acetylation, DNA-binding, isopeptide bond, nucleus; 2.80A {Mus musculus}

Probab=95.35  E-value=0.0053  Score=51.28  Aligned_cols=40  Identities=33%  Similarity=0.470  Sum_probs=32.7

Q ss_pred             HHHHHHHhhHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 018357           71 KALRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQR  113 (357)
Q Consensus        71 ~~~~rl~~nreaar~sr~rkk~y~~~le~sr~~l~qleqel~~  113 (357)
                      |-.||--.||.+|+.||.||.+.+..||.-   +.+|.+|+++
T Consensus        37 K~~RR~lKNR~yAq~CR~rk~~~~~~LE~e---~~~L~~e~e~   76 (107)
T 3a5t_A           37 KQRRRTLKNRGYAASCRVKRVTQKEELEKQ---KAELQQEVEK   76 (107)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HTTTSSTTTT
T ss_pred             HHHHHhhhhHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHH
Confidence            678999999999999999999999999976   4444444443

>3itf_A Periplasmic adaptor protein CPXP; CPXR, CPXA, cpxrap, CPX-pathway, envelope stress, transduction; HET: MSE; 1.45A {Escherichia coli str} PDB: 3qzc_A

Probab=94.69  E-value=0.21  Score=43.45  Aligned_cols=100  Identities=17%  Similarity=0.210  Sum_probs=62.7

Q ss_pred             cCCCChHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhhhhccCCCCCCCchhhhHhHHHHHHHHHHHHHHHHHHH
Q 018357          232 HLEPLTDQQLMGICNLQQSSQQAEDALSQ-GMEALQQSLVDTLSASSLGPTSSGNVADYMGQMALAMGKLATLENFIHQA  310 (357)
Q Consensus       232 ~LepLTeqQl~~I~~Lqqst~qaEdaLsq-gma~LQqslad~la~~~~g~~~~g~va~~~~qm~~Am~kl~~Le~fv~qA  310 (357)
                      .| +||++|...|..|.+..+.+...+.. .++    .+-+.+.++.+      +-+    .+.   ..++.+...-.+.
T Consensus        43 ~L-~LTdeQkqqir~L~~~~r~~~~~~~~~~r~----~l~~Li~ad~f------Dea----a~r---al~~~~~~~~~e~  104 (145)
T 3itf_A           43 GI-SLTEHQRQQMRDLMQQARHEQPPVNVSELE----TMHRLVTAENF------DEN----AVR---AQAEKMANEQIAR  104 (145)
T ss_dssp             TC-CCCHHHHHHHHHHHHHHHHHSCCCCHHHHH----HHHHHHTCSSC------CHH----HHH---HHHHHHHHHHHHH
T ss_pred             cC-CCCHHHHHHHHHHHHHHHHHhhhccHHHHH----HHHHHHccCCC------CHH----HHH---HHHHHHHHHHHHH
Confidence            44 69999999999999887776554432 222    23333433221      111    111   1223344444444


Q ss_pred             hHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhhcc
Q 018357          311 DLLRQQTLQQMHRILTARQAARALLVINDYTSRLRALSS  349 (357)
Q Consensus       311 D~LR~qTL~~m~~ILTprQAArfLlAl~ey~~rLRalss  349 (357)
                      --.|.++-.+|..||||-|-+.|---..+-...++.++.
T Consensus       105 ~v~r~k~~~qiy~vLTPEQk~ql~e~~~~r~~~~~~~~~  143 (145)
T 3itf_A          105 QVEMAKVRNQMYRLLTPEQQAVLNEKHQQRMEQLRDVTQ  143 (145)
T ss_dssp             HHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTTCGGG
T ss_pred             HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHhhc
Confidence            457888899999999999999998877766666665543

>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A

Probab=94.51  E-value=0.12  Score=40.76  Aligned_cols=47  Identities=28%  Similarity=0.290  Sum_probs=35.7

Q ss_pred             cHHHHHHHHhhHHHHHHhhhhHHHHHHHHHHH-----------HHHHHHHHHHHHHHH
Q 018357           69 DQKALRRLAQNREAARKSRLRKKAYVQQLENS-----------RLRLAQLEQELQRAR  115 (357)
Q Consensus        69 ~~~~~~rl~~nreaar~sr~rkk~y~~~le~s-----------r~~l~qleqel~~ar  115 (357)
                      |++-..|--.|.+||++||-++|.-.+.++..           +.++.+|+.|+...|
T Consensus        13 d~~Y~~rR~rNN~AakrSR~krk~r~~e~~~r~~~L~~eN~~L~~~v~~L~~E~~~Lr   70 (78)
T 1gu4_A           13 SDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLR   70 (78)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            56777788999999999999999988887543           234556666666665

>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1

Probab=93.73  E-value=0.2  Score=40.23  Aligned_cols=48  Identities=27%  Similarity=0.288  Sum_probs=36.3

Q ss_pred             cHHHHHHHHhhHHHHHHhhhhHHHHHHHHHHH-----------HHHHHHHHHHHHHHHH
Q 018357           69 DQKALRRLAQNREAARKSRLRKKAYVQQLENS-----------RLRLAQLEQELQRARQ  116 (357)
Q Consensus        69 ~~~~~~rl~~nreaar~sr~rkk~y~~~le~s-----------r~~l~qleqel~~ar~  116 (357)
                      |++-..|-..|.+||++||-.+|.=.++++..           +.++.+|+.|++..|.
T Consensus        13 d~~Y~~rR~rNN~AarrSR~krk~r~~e~~~r~~~Le~EN~~Lr~~v~~L~~E~~~Lr~   71 (87)
T 1hjb_A           13 SDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLRN   71 (87)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            66777888999999999999998877666432           3456677777777763

>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A

Probab=89.93  E-value=0.86  Score=36.87  Aligned_cols=34  Identities=29%  Similarity=0.366  Sum_probs=29.4

Q ss_pred             cHHHHHHHHhhHHHHHHhhhhHHHHHHHHHHHHH
Q 018357           69 DQKALRRLAQNREAARKSRLRKKAYVQQLENSRL  102 (357)
Q Consensus        69 ~~~~~~rl~~nreaar~sr~rkk~y~~~le~sr~  102 (357)
                      .-|-.||--+||-+|..||-||-.-+..||.-..
T Consensus        25 ~lKq~RRtlKNRgyAq~CR~Kr~~q~~~LE~e~~   58 (90)
T 2wt7_B           25 RLKQKRRTLKNRGYAQSCRYKRVQQKHHLENEKT   58 (90)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            3467889999999999999999999999998743

>1skn_P DNA-binding domain of SKN-1; complex (transcription factor/DNA), transcription/DNA complex; HET: DNA LDA; 2.50A {Caenorhabditis elegans} SCOP: a.37.1.1

Probab=87.63  E-value=0.26  Score=40.03  Aligned_cols=29  Identities=28%  Similarity=0.445  Sum_probs=23.4

Q ss_pred             HHHHHHHHhhHHHHHHhhhhHHHHHHHHH
Q 018357           70 QKALRRLAQNREAARKSRLRKKAYVQQLE   98 (357)
Q Consensus        70 ~~~~~rl~~nreaar~sr~rkk~y~~~le   98 (357)
                      -+..||-..||-||++||.||..-+..||
T Consensus        61 ir~~RRR~KNr~AA~~CRkrK~~~~d~l~   89 (92)
T 1skn_P           61 IRKIRRRGKNKVAARTCRQRRTDRHDKMS   89 (92)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTTTC-
T ss_pred             HHHHHHHHhhHHHHHHHHHHHHHHHHhhh
Confidence            35678999999999999999987665554

>3oeo_A Spheroplast protein Y; LTXXQ, extracytoplasmic stress response-related, signaling P; 2.70A {Escherichia coli}

Probab=86.79  E-value=0.28  Score=41.98  Aligned_cols=99  Identities=15%  Similarity=0.145  Sum_probs=54.1

Q ss_pred             hhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCchhhhHhHHHHHHHHHHHHHHHHHH
Q 018357          230 GNHLEPLTDQQLMGICNLQQSSQQAEDALSQGMEALQQSLVDTLSASSLGPTSSGNVADYMGQMALAMGKLATLENFIHQ  309 (357)
Q Consensus       230 ~~~LepLTeqQl~~I~~Lqqst~qaEdaLsqgma~LQqslad~la~~~~g~~~~g~va~~~~qm~~Am~kl~~Le~fv~q  309 (357)
                      ...| +||++|...|..|.+..+..-..   .+....+.+.+.+.++.+      +-+    .+..   .++.+...-.+
T Consensus        29 ~~~L-~LT~eQ~~qir~i~~~~r~~~~~---~~~~~r~~l~~Li~a~~f------Dea----av~a---l~~~~~~~~~e   91 (138)
T 3oeo_A           29 FKDL-NLTDAQKQQIREIMKGQRDQMKR---PPLEERRAMHDIITSDTF------DKV----KAEA---QIAKMEEQRKA   91 (138)
T ss_dssp             -CCS-CCCTTHHHHHHHHHHHHSSSSCC---CCTTHHHHHHHHHTCSSC------CHH----HHHH---HHGGGSHHHHH
T ss_pred             HhcC-CCCHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHhccCCC------CHH----HHHH---HHHHHHHHHHH
Confidence            3566 69999999999998777554221   111222334444433211      111    1111   12223333344


Q ss_pred             HhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Q 018357          310 ADLLRQQTLQQMHRILTARQAARALLVINDYTSRLR  345 (357)
Q Consensus       310 AD~LR~qTL~~m~~ILTprQAArfLlAl~ey~~rLR  345 (357)
                      .--.|.++..+|..||||-|-+.|---+.+-..+++
T Consensus        92 ~~~~~~~~~~~~~~vLTPEQr~q~~~~~~kr~~~~~  127 (138)
T 3oeo_A           92 NMLAHMETQNKIYNILTPEQKKQFNANFEKRLTERP  127 (138)
T ss_dssp             HHHHHHHHHHHHHTTSCHHHHHHHHHHTC-------
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhh
Confidence            445688899999999999999998776665554444

>3o39_A Periplasmic protein related to spheroblast format; alpha-helical, structural genomics, montreal-kingston bacter structural genomics initiative; HET: MSE; 2.60A {Escherichia coli}

Probab=85.13  E-value=1.3  Score=36.70  Aligned_cols=84  Identities=19%  Similarity=0.219  Sum_probs=46.6

Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCchhhhHhHHHHHHHHHHHHHHHHHHHhHHH
Q 018357          235 PLTDQQLMGICNLQQSSQQAEDALSQGMEALQQSLVDTLSASSLGPTSSGNVADYMGQMALAMGKLATLENFIHQADLLR  314 (357)
Q Consensus       235 pLTeqQl~~I~~Lqqst~qaEdaLsqgma~LQqslad~la~~~~g~~~~g~va~~~~qm~~Am~kl~~Le~fv~qAD~LR  314 (357)
                      +||++|...|-.|....+.+-...+.  +.- +.+-+.+.++.+      |-+    .+....+++   ...-.+.--.|
T Consensus        17 ~LTd~Qk~qir~L~~~~r~~~~~~~~--~~r-~~m~~Li~ad~F------DEa----aar~l~~~~---~~~~~e~~v~~   80 (108)
T 3o39_A           17 NLTDAQKQQIREIMKGQRDQMKRPPL--EER-RAMHDIIASDTF------DKA----KAEAQIAKM---EEQRKANMLAH   80 (108)
T ss_dssp             CCCHHHHHHHHHHHHTTTTSCCCCCH--HHH-HHHHHHHSSSSC------CHH----HHHHHHHHT---HHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHhcccccH--HHH-HHHHHHhccCCC------CHH----HHHHHHHHH---HHHHHHHHHHH
Confidence            69999999999998877665322221  111 223344443322      111    111112222   12222222356


Q ss_pred             HHHHHHHHHhcCHHHHHHHH
Q 018357          315 QQTLQQMHRILTARQAARAL  334 (357)
Q Consensus       315 ~qTL~~m~~ILTprQAArfL  334 (357)
                      .++=++|..||||-|-+.|-
T Consensus        81 ~r~~~qmy~lLTPEQk~q~~  100 (108)
T 3o39_A           81 METQNKIYNILTPEQKKQFN  100 (108)
T ss_dssp             HHHHHHHHTTSCHHHHHHHH
T ss_pred             HHHHHHHHHhCCHHHHHHHH
Confidence            67788999999999998874

>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}

Probab=82.31  E-value=17  Score=32.31  Aligned_cols=43  Identities=23%  Similarity=0.198  Sum_probs=36.6

Q ss_pred             CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhc
Q 018357          234 EPLTDQQLMGICNLQQSSQQAEDALSQGMEALQQSLVDTLSAS  276 (357)
Q Consensus       234 epLTeqQl~~I~~Lqqst~qaEdaLsqgma~LQqslad~la~~  276 (357)
                      -+||++|...|..|.++-+.+-.+|.+.|...++.+-+.+.++
T Consensus        66 LnLT~EQq~ql~~I~~e~r~~~~~Lr~ql~akr~EL~aL~~a~  108 (175)
T 3lay_A           66 SPLTTEQQATAQKIYDDYYTQTSALRQQLISKRYEYNALLTAS  108 (175)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            4799999999999999999999999999999888888776543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00