Citrus Sinensis ID: 018398

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350------
Protein Sequence
MAWWSSASASSTFNSSFLLRSSLSSYSNKKLSSNHVAHAPPSLFSPYITINSFKKRCIIVTNCTTTNKKNMESSSTVDCVETGTDVECLISPTDKEEIEQEQVEQDGQVMELGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGK
Secondary Structure (PSIPRED)
cccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccEEEEEccccccccccccccccccccccccEEEccccccccHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cccEEcccccccccccEccccccccccccEEEccccccccccccccEEEEccccEEEEEEEEEcccccccccccccccEcccccEEEEEEccccccccccccHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHcHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
mawwssasasstfnsSFLLRSSlssysnkklssnhvahappslfspyitinsfKKRCIIVTNCtttnkknmessstvdcvetgtdveclisptdkeEIEQEQVEQDGQVMELGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFAssqgrklpsgfNAWVSIFLFALVDASCFQGFLAQGLqrtsaglgsviidsqPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLleapafdesnsslwgsGEWWMLLAAQSMAVGTVMVRWVSkysdpvmatgwHMVIGGLPLMVISVLnhdpvygesvkeLTSSDILALLYTSIFGSAISYGVYFYSATKGK
Flexible Loop (DISEMBL)
mawwssasasstfnsSFLLRSSLSSYSNKKLSSNHvahappslfspyitINSFKKRCIIVTNCtttnkknmessstvdcvetgTDVECLISPTDKEEIEQEQVEQDGQVMELGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGK
Low Complexity Region (SEG)
MawwssasasstfnssfllrsslssysnkklssNHVAHAPPSLFSPYITINSFKKRCIIVTNCTTTNKKNMESSSTVDCVETGTDVECLISPTDKEEIEQEQVEQDGQVMELGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESiglvgagglvlgvigllllEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGK
Disordered region (IsUnstruct)
*****************************************SLFSPYITINSFKKRCIIVTNCTTTN*********VDCVETGTDVECLI*****************QVMELGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYS*****
Disordered Region (DISOPRED)
********AS***NSSFLLRSSLS***N*K****HVAHAPPSLFSPYITINSFK************************CVETGTDVE*****************************EWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKG*
Disordered Region (DISEMBL)
*************NSSFLLRSSLSSYSNKKLSSNHVAHAPPSLFSPYITINSFKKRCIIVTNCTTTNKK*********CVETGTDVECLISPTDK*********QDGQVMELGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGK
Disordered Region (DISPRO)
******************LRSSLSSYSNKKLSSNHVAHAPPSLFSPYITINSFKKRCIIVTNCTTTN*****SSSTVDCVETGTDVECLISPT***************VMELGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKG*
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAWWSSASASSTFNSSFLLRSSLSSYSNKKLSSNHVAHAPPSLFSPYITINSFKKRCIIVTNCTTTNKKNMESSSTVDCVETGTDVECLISPTDKEEIEQEQVEQDGQVMELGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	356	2.2.26 [Sep-21-2011]
Q93V85	417	WAT1-related protein At3g	yes	no	0.769	0.657	0.736	1e-108
P74436	330	Uncharacterized transport	N/A	no	0.651	0.703	0.493	7e-54
O34416	292	Uncharacterized transport	yes	no	0.617	0.753	0.251	7e-09
O32256	305	Uncharacterized transport	no	no	0.601	0.701	0.279	3e-07
P42194	297	Protein PecM OS=Dickeya d	yes	no	0.567	0.680	0.275	2e-06
P96680	306	Uncharacterized transport	no	no	0.525	0.611	0.277	9e-06
O29973	276	Uncharacterized transport	yes	no	0.494	0.637	0.241	8e-05
P37511	305	Uncharacterized transport	no	no	0.477	0.557	0.267	0.0003

>sp|Q93V85|WTR16_ARATH WAT1-related protein At3g02690, chloroplastic OS=Arabidopsis thaliana GN=At3g02690 PE=1 SV=1

 Score =  390 bits (1002), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 207/281 (73%), Positives = 237/281 (84%), Gaps = 7/281 (2%)

Query: 77  VDCVETGTDVECLISPTDKEEIEQEQVEQDGQVMELGMLLEWAVLVSPFFFWGTAMVAMK 136
           VDCV  G+DVEC ++  + EE     +   G+    G  LEW VL+SPFFFWGTAMVAMK
Sbjct: 89  VDCVGMGSDVEC-VNNGEDEENRSSGILSGGE----GTFLEWTVLISPFFFWGTAMVAMK 143

Query: 137 EVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLA 196
           EVLP  G FFVAAFRLIPAGLLL+ FA  +GR LP G NAW SI LFALVDA+CFQGFLA
Sbjct: 144 EVLPITGPFFVAAFRLIPAGLLLVAFAVYKGRPLPEGINAWFSIALFALVDATCFQGFLA 203

Query: 197 QGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAF--D 254
           QGLQRTSAGLGSVIIDSQPL+VAVLA+ LFGESIG+V AGGL+LGV GLLLLE P+   D
Sbjct: 204 QGLQRTSAGLGSVIIDSQPLTVAVLASFLFGESIGIVRAGGLLLGVAGLLLLEVPSVTSD 263

Query: 255 ESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNH 314
            +N SLWGSGEWWMLLAAQSMA+GTVMVRWVSKYSDP+MATGWHMVIGGLPL+ ISV+NH
Sbjct: 264 GNNFSLWGSGEWWMLLAAQSMAIGTVMVRWVSKYSDPIMATGWHMVIGGLPLLAISVINH 323

Query: 315 DPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKG 355
           DPV+  S+++L+++D++ALLYTSIFGSA+SYGVYFYSATKG
Sbjct: 324 DPVFNGSLQDLSTNDVIALLYTSIFGSAVSYGVYFYSATKG 364

Arabidopsis thaliana (taxid: 3702)

>sp|P74436|Y355_SYNY3 Uncharacterized transporter sll0355 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0355 PE=3 SV=1

 Score =  211 bits (537), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 123/249 (49%), Positives = 163/249 (65%), Gaps = 17/249 (6%)

Query: 121 LVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSI 180
           L++PFF WGTAMVAMK VL     FFVA  RLIPAG+L++ +A  Q R  P  +  W  I
Sbjct: 17  LIAPFFLWGTAMVAMKGVLADTTPFFVATVRLIPAGILVLLWAMGQKRPQPQNWQGWGWI 76

Query: 181 FLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGE-----SIGLVGA 235
            LFALVD + FQGFLAQGL+RT AGLGSVIIDSQP++VA+L++ LF E         +  
Sbjct: 77  ILFALVDGTLFQGFLAQGLERTGAGLGSVIIDSQPIAVALLSSWLFKEVIGGIGWLGLLL 136

Query: 236 GGLVLGVIG--------LLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSK 287
           G   + +IG        L  L+  + + S S+L  SGE WMLLA+ SMAVGTV++ +VS+
Sbjct: 137 GVGGISLIGLPDEWFYQLWHLQGLSINWSGSALGSSGELWMLLASLSMAVGTVLIPFVSR 196

Query: 288 YSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGV 347
             DPV+ATGWHM+IGGLPL+ I+++       E  + +       L Y ++FGSAI+YG+
Sbjct: 197 RVDPVVATGWHMIIGGLPLLAIALVQDS----EPWQNIDLWGWGNLAYATVFGSAIAYGI 252

Query: 348 YFYSATKGK 356
           +FY A+KG 
Sbjct: 253 FFYLASKGN 261

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

>sp|O34416|YOAV_BACSU Uncharacterized transporter YoaV OS=Bacillus subtilis (strain 168) GN=yoaV PE=3 SV=1

 Score = 62.0 bits (149), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 104/235 (44%), Gaps = 15/235 (6%)

Query: 121 LVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSI 180
           ++S    WG   VAMK  +        +  RL    + L      Q +KL        S 
Sbjct: 8   IISVTLIWGYTWVAMKVGIHDIPPLLFSGLRLFIGAVPLFLILFIQRKKLSIQKEHLKSY 67

Query: 181 FLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVL 240
            + +L+    + G L  G+Q   +G  SV++ + P+ V V++     E + +    GLV 
Sbjct: 68  IIMSLLMGLGYMGILTYGMQFVDSGKTSVLVYTMPIFVTVISHFSLNEKMNVYKTMGLVC 127

Query: 241 GVIGLLLL---EAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGW 297
           G+ GLL +   E    D+S       GE  +L+AA S  +  V  +   K+ D +    W
Sbjct: 128 GLFGLLFIFGKEMLNIDQSAL----FGELCVLVAALSWGIANVFSKLQFKHIDIIHMNAW 183

Query: 298 HMVIGGLPLMVISVLNHDPVYGESV--KELTSSDILALLYTSIFGSAISYGVYFY 350
           H+++G + L+V S +       E+V   E T   + +LL+  +  +  ++ V+F+
Sbjct: 184 HLMMGAVMLLVFSFIF------EAVPSAEWTYQAVWSLLFNGLLSTGFTFVVWFW 232

Bacillus subtilis (strain 168) (taxid: 224308)

>sp|O32256|YVBV_BACSU Uncharacterized transporter YvbV OS=Bacillus subtilis (strain 168) GN=yvbV PE=3 SV=1

 Score = 56.6 bits (135), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 99/222 (44%), Gaps = 8/222 (3%)

Query: 128 WGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVD 187
           WG      K  L  +     A  R +  GLLL+  A  +  KL      W    + AL++
Sbjct: 20  WGVNWPLSKAALAYSPPLLFAGIRTLIGGLLLVIVALPRIHKLRLK-ETWPIYLVSALLN 78

Query: 188 ASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLL 247
            + F G    GL    AGL S I+  QP+ + V + L  GES+ ++   GL+LG  G+ +
Sbjct: 79  ITLFYGLQTIGLNYLPAGLFSAIVFFQPVLMGVFSWLWLGESMFVMKVIGLILGFAGVAV 138

Query: 248 LEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLM 307
           + A  F    S +   G    L +A S A+GTV ++      D +      + IG + L+
Sbjct: 139 ISAAGFGGHISVI---GVLLALGSAVSWALGTVYMKKTGSRVDSIWMVALQLTIGSVFLL 195

Query: 308 VISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYF 349
           +            S  + T+  I +LL+ S+F  A+ + V+F
Sbjct: 196 ISGFWTES----FSAIQWTAPFITSLLFISVFVIALGWLVFF 233

Bacillus subtilis (strain 168) (taxid: 224308)

>sp|P42194|PECM_DICD3 Protein PecM OS=Dickeya dadantii (strain 3937) GN=pecM PE=3 SV=1

 Score = 53.5 bits (127), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 103/229 (44%), Gaps = 27/229 (11%)

Query: 128 WGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVD 187
           WGT      + LP       A  R +PAG++LI      G+ LP     W  +F+   ++
Sbjct: 14  WGTTYFVTTQFLPADKPLLAALIRALPAGIILIL-----GKNLPPVGWLW-RLFVLGALN 67

Query: 188 ASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGL-L 246
              F   L     R   G+ +++   QPL V +L+ LL  + +        V G IG+ L
Sbjct: 68  IGVFFVMLFFAAYRLPGGVVALVGSLQPLIVILLSFLLLTQPVLKKQMVAAVAGGIGIVL 127

Query: 247 LLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDP-----VMATGWHMVI 301
           L+  P    + + L  S      LA  SMA G V+ +   K+  P     +  TGW +  
Sbjct: 128 LISLPKAPLNPAGLVASA-----LATMSMASGLVLTK---KWGRPAGMTMLTFTGWQLFC 179

Query: 302 GGLPLMVISVLNHDPVYGESVKEL-TSSDILALLYTSIFGSAISYGVYF 349
           GGL ++ + +L       E + +L T +++   LY +I GS ++Y ++F
Sbjct: 180 GGLVILPVQMLT------EPLPDLVTLTNLAGYLYLAIPGSLLAYFMWF 222

Involved in pectinase, cellulase, and blue pigment regulation.

Dickeya dadantii (strain 3937) (taxid: 198628)

>sp|P96680|YDFC_BACSU Uncharacterized transporter YdfC OS=Bacillus subtilis (strain 168) GN=ydfC PE=3 SV=1

 Score = 51.6 bits (122), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 15/202 (7%)

Query: 147 VAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGL 206
           +A FRL+   + L+ FA     +LP       +IFL   +  + +   L  G +  SAG+
Sbjct: 38  LALFRLLIGSMALLLFAVLTQMRLPD-LKDIPAIFLLGFLGFAFYHILLNIGEKTVSAGV 96

Query: 207 GSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEW 266
            S+++ + P+  A+L+ L + E  G     G ++ ++G+LL+   A D + S    SG  
Sbjct: 97  ASLLVTTAPIFSAMLSRLFYKEHFGFTKWLGSMISLLGVLLIAFGAGDFTYSM---SGIL 153

Query: 267 WMLLAAQSMAVGTVM-VRWVSKYS--DPVMATGWHMVIGGLPLMVISVLNHDPVYGESVK 323
            +LLAA S ++  V   R++ KY     V  T W    G +P++V       P  GE + 
Sbjct: 154 VILLAAFSESIYFVFQARYIKKYGFIPFVTFTIWG---GTIPMLVF-----LPGLGEEMM 205

Query: 324 ELTSSDILALLYTSIFGSAISY 345
             + S  L+++Y  +  + I Y
Sbjct: 206 NASISATLSIVYLGLLPTVIPY 227

Bacillus subtilis (strain 168) (taxid: 224308)

>sp|O29973|Y266_ARCFU Uncharacterized transporter AF_0266 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=AF_0266 PE=3 SV=1

 Score = 48.5 bits (114), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 93/195 (47%), Gaps = 19/195 (9%)

Query: 117 EWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPA----GLLLITFASSQGRKLPS 172
           +W VL     FWG A  A+K  +       +A+ R   A     +++I     + + LP 
Sbjct: 3   KWIVLALTVTFWGLAFTAIKYSVRFLSPIAIASLRFAIANTLFAVIIILGKRIKWKDLPK 62

Query: 173 GFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGL 232
                  +F   +   S +  FL  G    S+G+ SV+I   P+ V +L+A+   E I  
Sbjct: 63  -------VFALGIFGVSVYHVFLNLGEVYISSGVASVVISLAPIFVLILSAIFLRERITY 115

Query: 233 VGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVR-WVSKYSDP 291
               G+++  +G++++  P++    ++++G     ++++  + A+ T   +  +SKY +P
Sbjct: 116 SKVVGIIIAFLGVVVISEPSY----ANIYGIA--LVMVSTVAAAIYTTFGKSLLSKY-NP 168

Query: 292 VMATGWHMVIGGLPL 306
           +  T   MV+G +PL
Sbjct: 169 ITLTSNAMVLGSIPL 183

Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) (taxid: 224325)

>sp|P37511|YYAM_BACSU Uncharacterized transporter YyaM OS=Bacillus subtilis (strain 168) GN=yyaM PE=3 SV=1

 Score = 46.2 bits (108), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 2/172 (1%)

Query: 148 AAFRL-IPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGL 206
           AA+R  + A ++LI    ++G K        VS  +  ++    F      GL+ TS   
Sbjct: 37  AAWRFGLAAAVMLIILIFTEGIKKSQLRKNAVSYIVLGIIGIFGFNALFFVGLKYTSPVN 96

Query: 207 GSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEW 266
           G++I+   PL  A+LA ++  +++      G+    IG+LL+      E+  +L  SG  
Sbjct: 97  GALIMGLNPLLTAILARIILKDNMTKKQVLGIFFAFIGVLLVITQGSIETIKTLSISGGD 156

Query: 267 WMLLAAQSM-AVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPV 317
            ++       A+  V+ R   K   P+  T + MVIG + L+V+S+    PV
Sbjct: 157 LIIFTGNVCWALYGVLGRRFVKDGTPLSTTTYTMVIGAVSLIVVSLFTSKPV 208

Bacillus subtilis (strain 168) (taxid: 224308)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	356
356569422	412	PREDICTED: uncharacterized transporter s	0.971	0.839	0.643	1e-118
356537734	412	PREDICTED: uncharacterized transporter s	0.814	0.703	0.735	1e-116
297828730	424	integral membrane family protein [Arabid	0.935	0.785	0.660	1e-110
255579425	475	Protein pecM, putative [Ricinus communis	0.949	0.711	0.655	1e-109
18396278	417	nodulin MtN21 /EamA-like transporter pro	0.769	0.657	0.736	1e-106
449445186	424	PREDICTED: uncharacterized transporter s	0.851	0.714	0.674	1e-105
225466171	382	PREDICTED: uncharacterized transporter s	0.679	0.633	0.823	1e-103
6957732	432	unknown protein [Arabidopsis thaliana]	0.769	0.634	0.699	1e-103
116786937	464	unknown [Picea sitchensis]	0.825	0.633	0.617	7e-97
224119940	279	predicted protein [Populus trichocarpa]	0.629	0.802	0.845	2e-95

>gi|356569422|ref|XP_003552900.1| PREDICTED: uncharacterized transporter sll0355-like [Glycine max]

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 235/365 (64%), Positives = 274/365 (75%), Gaps = 19/365 (5%)

Query: 2   AWWSSASASSTFNSSFLLR--SSLSSYSNKKLSSNHVAHAPPSLFSPYITINSFKKRCII 59
           +WW S+ +++   S+   R  S LS  S  ++ +      PPS F+ + T     +  + 
Sbjct: 3   SWWCSSPSATLTVSTTTTRHFSLLSHTSQFRIQTLTF---PPSSFTRFTTAPPSLRFRVP 59

Query: 60  VTNCTTTNKKNMESSSTVDCVETGTDVECLISPTDKEEIEQEQVEQDGQVMELGMLL--- 116
            +N T    +  E    VDCV TG DVECL+   + EE + E             +L   
Sbjct: 60  CSNKTAFETELPEDG--VDCVGTGQDVECLV---NTEEKQSEPSSSSSSSSSSSSMLCLA 114

Query: 117 ----EWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPS 172
               E AVLVSPFFFWGTAMVAMKEVLPK G FFV+AFRLIPAG LL+ FA+S+GR LPS
Sbjct: 115 EALWEGAVLVSPFFFWGTAMVAMKEVLPKCGPFFVSAFRLIPAGFLLVAFAASRGRTLPS 174

Query: 173 GFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGL 232
           GFNAW+SI LFALVDA+CFQGFLA+GLQRTSAGLGSVIIDSQPL+VAVLAALLFGESIG+
Sbjct: 175 GFNAWLSITLFALVDAACFQGFLAEGLQRTSAGLGSVIIDSQPLTVAVLAALLFGESIGV 234

Query: 233 VGAGGLVLGVIGLLLLEAPA--FDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSD 290
           VGA GLVLGVIGL+LLE PA  FDESN SLWGSGEWWMLLAAQSMA+GTVMVRWVSKYSD
Sbjct: 235 VGAAGLVLGVIGLVLLELPALSFDESNFSLWGSGEWWMLLAAQSMAIGTVMVRWVSKYSD 294

Query: 291 PVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFY 350
           PVMATGWHMVIGGLPL++ +VLN+DP    S+KE +S+DILALLYTSIFGSA+SYGV+FY
Sbjct: 295 PVMATGWHMVIGGLPLVLFAVLNNDPAVSLSLKEYSSTDILALLYTSIFGSAVSYGVFFY 354

Query: 351 SATKG 355
           SATKG
Sbjct: 355 SATKG 359

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356537734|ref|XP_003537380.1| PREDICTED: uncharacterized transporter sll0355-like [Glycine max]

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 217/295 (73%), Positives = 245/295 (83%), Gaps = 5/295 (1%)

Query: 66  TNKKNMESS---STVDCVETGTDVECLISPTDKEEIEQEQVEQDGQVMELGMLLEWAVLV 122
           +NK   E+      VDCV TG DVECL++  +K+            +     L E AVLV
Sbjct: 65  SNKTAFETELPEDGVDCVGTGQDVECLVNTEEKQSEPTSSSSSSSMLCLAEALWEGAVLV 124

Query: 123 SPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFL 182
           SPFFFWGTAMVAMKEVLPK G FFV+AFRLIPAG LL+ FA+S+GR LPSGF AW+SI L
Sbjct: 125 SPFFFWGTAMVAMKEVLPKCGPFFVSAFRLIPAGFLLVAFAASRGRSLPSGFIAWLSITL 184

Query: 183 FALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGV 242
           FALVDA+CFQGFLA+GLQRTSAGLGS+IIDSQPL+VAVLAALLFGESIG+VGA GLVLGV
Sbjct: 185 FALVDATCFQGFLAEGLQRTSAGLGSIIIDSQPLTVAVLAALLFGESIGVVGAAGLVLGV 244

Query: 243 IGLLLLEAPA--FDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMV 300
           IGL+LLE PA  FDESN SLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMV
Sbjct: 245 IGLVLLELPALSFDESNFSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMV 304

Query: 301 IGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKG 355
           IGGLPL++ +VLN+DP    S+KE +S+DILALLYTS+FGSA+SYGV+FYSATKG
Sbjct: 305 IGGLPLVLFAVLNNDPALSLSLKEYSSTDILALLYTSVFGSAVSYGVFFYSATKG 359

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297828730|ref|XP_002882247.1| integral membrane family protein [Arabidopsis lyrata subsp. lyrata] gi|297328087|gb|EFH58506.1| integral membrane family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 230/348 (66%), Positives = 271/348 (77%), Gaps = 15/348 (4%)

Query: 18  LLRSSLSSYSNKKLSSNHVAHAPPSLF-SPYITINSFKKRC---IIVTNCTTTNKKNMES 73
           + R + SS +NK  S+  V     S F S +I ++ FK+R     +V   TT+NK   E+
Sbjct: 29  ITRRANSSCANKYPSNILVKSLRHSRFDSKHILVSIFKRRINGDSVVRRSTTSNKSTEET 88

Query: 74  SST----VDCVETGTDVECLISPTDKEEIEQEQVEQDGQVMELGMLLEWAVLVSPFFFWG 129
            S+    VDCV  G+DVEC+ +  D EE     +   G+    G LLEW VL+SPFFFWG
Sbjct: 89  ESSSSSSVDCVGMGSDVECVYNGED-EENRSSGILNGGE----GTLLEWTVLISPFFFWG 143

Query: 130 TAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDAS 189
           TAMVAMKEVLP  G FFVAAFRLIPAGLLL+ FA  + R LP G NAW+SI LFALVDA+
Sbjct: 144 TAMVAMKEVLPITGPFFVAAFRLIPAGLLLVAFAVYKARPLPKGINAWLSIALFALVDAT 203

Query: 190 CFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLE 249
           CFQGFLAQGLQRTSAGLGSVIIDSQPL+VAVLA+ LFGESIG+V AGGL+LGV GLLLLE
Sbjct: 204 CFQGFLAQGLQRTSAGLGSVIIDSQPLTVAVLASFLFGESIGIVRAGGLLLGVAGLLLLE 263

Query: 250 APAF--DESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLM 307
            P+   D +N SLWGSGEWWMLLAAQSMA+GTVMVRWVSKYSDP+MATGWHMVIGGLPL+
Sbjct: 264 VPSVTSDGNNFSLWGSGEWWMLLAAQSMAIGTVMVRWVSKYSDPIMATGWHMVIGGLPLL 323

Query: 308 VISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKG 355
            ISV+NHDPV+  S++EL+++D++ALLYTSIFGSA+SYGVYFYSATKG
Sbjct: 324 AISVINHDPVFNGSLQELSTNDVIALLYTSIFGSAVSYGVYFYSATKG 371

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255579425|ref|XP_002530556.1| Protein pecM, putative [Ricinus communis] gi|223529894|gb|EEF31824.1| Protein pecM, putative [Ricinus communis]

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 240/366 (65%), Positives = 280/366 (76%), Gaps = 28/366 (7%)

Query: 18  LLRSSLSSYSNKKLSSNHVAHAP-------PSLFSPYITINSFKKRCI---IVTNCTTTN 67
           LL  SL +  + K S  H++  P       PS  S +   +S +        + NCTT++
Sbjct: 3   LLSPSLPNNLSVKFSLLHISPPPYNRLFKYPSPISSHTITDSTRTTRRRPNFIANCTTSS 62

Query: 68  KK-NMESSST----VDCVETGTDVECLISP----------TDKEEIEQEQVEQDGQVMEL 112
           +   +ES+S+    +DCV TG DVECLIS           T+   +EQ + E++ +  +L
Sbjct: 63  RNVGLESTSSDSTDLDCVGTGLDVECLISSESSSNGTMSSTETTAVEQGREERESKRDDL 122

Query: 113 -GMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLP 171
             M++E  VLVSPFFFWGTAMVAMKEVLP  G FFVAAFRLIPAGL+LI FA+ + R  P
Sbjct: 123 LEMVVENGVLVSPFFFWGTAMVAMKEVLPLTGPFFVAAFRLIPAGLILIAFAAYKDRPFP 182

Query: 172 SGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIG 231
           SGFNAW+SIFLF LVDA+ FQGFLA+GLQRTSAGLGSVIIDSQPL+VAVLAALLFGESIG
Sbjct: 183 SGFNAWLSIFLFGLVDATFFQGFLAEGLQRTSAGLGSVIIDSQPLTVAVLAALLFGESIG 242

Query: 232 LVGAGGLVLGVIGLLLLEAPAF--DESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYS 289
           LVGAGGLVLGV+GLLLLE PA   D+SN SLWGSGEWWMLLAAQSMAVGTVMVRWV+KYS
Sbjct: 243 LVGAGGLVLGVVGLLLLEVPALSIDQSNFSLWGSGEWWMLLAAQSMAVGTVMVRWVTKYS 302

Query: 290 DPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYF 349
           DPVMATGWHMVIGGLPL VIS+LNHDP++  S++ELT SDI ALLYTSIFGSAISYGV+F
Sbjct: 303 DPVMATGWHMVIGGLPLTVISILNHDPLFNGSLQELTVSDIAALLYTSIFGSAISYGVFF 362

Query: 350 YSATKG 355
           YSATKG
Sbjct: 363 YSATKG 368

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18396278|ref|NP_566180.1| nodulin MtN21 /EamA-like transporter protein [Arabidopsis thaliana] gi|16226571|gb|AAL16203.1|AF428434_1 AT3g02690/F16B3_32 [Arabidopsis thaliana] gi|15010664|gb|AAK73991.1| AT3g02690/F16B3_32 [Arabidopsis thaliana] gi|21593005|gb|AAM64954.1| unknown [Arabidopsis thaliana] gi|22137110|gb|AAM91400.1| At3g02690/F16B3_32 [Arabidopsis thaliana] gi|332640327|gb|AEE73848.1| nodulin MtN21 /EamA-like transporter protein [Arabidopsis thaliana]

 Score =  390 bits (1002), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/281 (73%), Positives = 237/281 (84%), Gaps = 7/281 (2%)

Query: 77  VDCVETGTDVECLISPTDKEEIEQEQVEQDGQVMELGMLLEWAVLVSPFFFWGTAMVAMK 136
           VDCV  G+DVEC ++  + EE     +   G+    G  LEW VL+SPFFFWGTAMVAMK
Sbjct: 89  VDCVGMGSDVEC-VNNGEDEENRSSGILSGGE----GTFLEWTVLISPFFFWGTAMVAMK 143

Query: 137 EVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLA 196
           EVLP  G FFVAAFRLIPAGLLL+ FA  +GR LP G NAW SI LFALVDA+CFQGFLA
Sbjct: 144 EVLPITGPFFVAAFRLIPAGLLLVAFAVYKGRPLPEGINAWFSIALFALVDATCFQGFLA 203

Query: 197 QGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAF--D 254
           QGLQRTSAGLGSVIIDSQPL+VAVLA+ LFGESIG+V AGGL+LGV GLLLLE P+   D
Sbjct: 204 QGLQRTSAGLGSVIIDSQPLTVAVLASFLFGESIGIVRAGGLLLGVAGLLLLEVPSVTSD 263

Query: 255 ESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNH 314
            +N SLWGSGEWWMLLAAQSMA+GTVMVRWVSKYSDP+MATGWHMVIGGLPL+ ISV+NH
Sbjct: 264 GNNFSLWGSGEWWMLLAAQSMAIGTVMVRWVSKYSDPIMATGWHMVIGGLPLLAISVINH 323

Query: 315 DPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKG 355
           DPV+  S+++L+++D++ALLYTSIFGSA+SYGVYFYSATKG
Sbjct: 324 DPVFNGSLQDLSTNDVIALLYTSIFGSAVSYGVYFYSATKG 364

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449445186|ref|XP_004140354.1| PREDICTED: uncharacterized transporter sll0355-like [Cucumis sativus]

 Score =  386 bits (992), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 213/316 (67%), Positives = 248/316 (78%), Gaps = 13/316 (4%)

Query: 53  FKKRCIIVTNCTTTN-KKNMESSSTVDCVETGTDVECLISPTDKEEIEQ----------E 101
           F    I V NCT +     ++ + ++DCV T  DVEC++SP D++               
Sbjct: 56  FHYVAIPVANCTRSGGDTELDFTESIDCVGTAQDVECVVSPNDEDPSSSIGVPLKLGISS 115

Query: 102 QVEQDGQVMELGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLIT 161
               DG V  L    E+AVLVSPFFFWGTAMVAMKEVLP++G FFV+AFRLIPAG LLI 
Sbjct: 116 DYSGDGSVAVLEKAWEFAVLVSPFFFWGTAMVAMKEVLPRSGPFFVSAFRLIPAGFLLIA 175

Query: 162 FASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVL 221
           FA+ +GR  PSGF+AW+SI LFALVDA+ FQGFLAQGLQRTSAGLGSVIIDSQPL+VAVL
Sbjct: 176 FAAFRGRPFPSGFSAWISIILFALVDATFFQGFLAQGLQRTSAGLGSVIIDSQPLTVAVL 235

Query: 222 AALLFGESIGLVGAGGLVLGVIGLLLLEAPA--FDESNSSLWGSGEWWMLLAAQSMAVGT 279
           AA LFGES+GLVGA GLVLGV+GLLLLE P+  FD ++ SLWGSGEWWM LAAQSMAVGT
Sbjct: 236 AAFLFGESLGLVGAAGLVLGVLGLLLLEVPSLTFDANSFSLWGSGEWWMFLAAQSMAVGT 295

Query: 280 VMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIF 339
           VMVRWVSKYSDP+MATGWHMVIGGLPL++I +LNHDP    S+K+ T++DILALLY SIF
Sbjct: 296 VMVRWVSKYSDPIMATGWHMVIGGLPLLMICILNHDPAVSGSLKDFTTNDILALLYASIF 355

Query: 340 GSAISYGVYFYSATKG 355
           GSA+SYG +FYSATKG
Sbjct: 356 GSAVSYGSFFYSATKG 371

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225466171|ref|XP_002263956.1| PREDICTED: uncharacterized transporter sll0355 [Vitis vinifera]

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 201/244 (82%), Positives = 223/244 (91%), Gaps = 2/244 (0%)

Query: 114 MLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSG 173
           +L EW VLVSPFFFWGTAMVAMK+VLPKAG FFV++FRLIPAGLL+I +A+S+GRK PSG
Sbjct: 86  VLWEWGVLVSPFFFWGTAMVAMKQVLPKAGPFFVSSFRLIPAGLLIIAYAASRGRKQPSG 145

Query: 174 FNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLV 233
           F+AW+SIFLFALVDA+CFQGFLA+GLQRTSAGLGSVIIDSQPL+VAVLAALLFGESIG +
Sbjct: 146 FSAWLSIFLFALVDAACFQGFLAEGLQRTSAGLGSVIIDSQPLTVAVLAALLFGESIGFI 205

Query: 234 GAGGLVLGVIGLLLLEAPAF--DESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDP 291
           GA GLVLGVIGLLLLE PA   D SN SLWGSGEWWMLLAAQSMAVGTVM+RWV+KYSDP
Sbjct: 206 GAAGLVLGVIGLLLLEVPALSVDGSNFSLWGSGEWWMLLAAQSMAVGTVMIRWVTKYSDP 265

Query: 292 VMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYS 351
           VMATGWHMVIGGLPL++IS+LNHDP    S  ELTSSD+LALLYTSIFGSAISY V+FY 
Sbjct: 266 VMATGWHMVIGGLPLVLISILNHDPALSGSFNELTSSDLLALLYTSIFGSAISYSVFFYY 325

Query: 352 ATKG 355
           AT+G
Sbjct: 326 ATRG 329

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|6957732|gb|AAF32476.1| unknown protein [Arabidopsis thaliana]

 Score =  380 bits (976), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 207/296 (69%), Positives = 237/296 (80%), Gaps = 22/296 (7%)

Query: 77  VDCVETGTDVECLISPTDKEEIEQEQVEQDGQVMELGMLLEWAVLVSPFFFWGTAMVAMK 136
           VDCV  G+DVEC ++  + EE     +   G+    G  LEW VL+SPFFFWGTAMVAMK
Sbjct: 89  VDCVGMGSDVEC-VNNGEDEENRSSGILSGGE----GTFLEWTVLISPFFFWGTAMVAMK 143

Query: 137 EVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQ---- 192
           EVLP  G FFVAAFRLIPAGLLL+ FA  +GR LP G NAW SI LFALVDA+CFQ    
Sbjct: 144 EVLPITGPFFVAAFRLIPAGLLLVAFAVYKGRPLPEGINAWFSIALFALVDATCFQILVC 203

Query: 193 -----------GFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLG 241
                      GFLAQGLQRTSAGLGSVIIDSQPL+VAVLA+ LFGESIG+V AGGL+LG
Sbjct: 204 MLVMLVRIMVQGFLAQGLQRTSAGLGSVIIDSQPLTVAVLASFLFGESIGIVRAGGLLLG 263

Query: 242 VIGLLLLEAPAF--DESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHM 299
           V GLLLLE P+   D +N SLWGSGEWWMLLAAQSMA+GTVMVRWVSKYSDP+MATGWHM
Sbjct: 264 VAGLLLLEVPSVTSDGNNFSLWGSGEWWMLLAAQSMAIGTVMVRWVSKYSDPIMATGWHM 323

Query: 300 VIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKG 355
           VIGGLPL+ ISV+NHDPV+  S+++L+++D++ALLYTSIFGSA+SYGVYFYSATKG
Sbjct: 324 VIGGLPLLAISVINHDPVFNGSLQDLSTNDVIALLYTSIFGSAVSYGVYFYSATKG 379

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116786937|gb|ABK24307.1| unknown [Picea sitchensis]

 Score =  360 bits (923), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 203/329 (61%), Positives = 240/329 (72%), Gaps = 35/329 (10%)

Query: 61  TNCTTTNK-KNMESSSTVDCVETGTDVECLISPTDKEEIEQEQVEQDGQVM--------- 110
           T   TT+K   M  S  +DC++ G DVEC++ PT  EE      + + + +         
Sbjct: 80  TPTITTHKIPEMGPSVEMDCIDNGLDVECVV-PTTAEEANGRPTDAEDEKLLPNSFSFDM 138

Query: 111 ----ELGMLL----EWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITF 162
               E+G LL    +  VL+SPFFFWG++MVAMKEVLPK G  FVAA RLIP+GLLLI+F
Sbjct: 139 TEKQEMGGLLNAIRDTLVLISPFFFWGSSMVAMKEVLPKTGPLFVAAVRLIPSGLLLISF 198

Query: 163 ASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLA 222
           A   G+K PSG  AW+S+ LF LVDA CFQGFLA+GL RTSAGLGSVIIDSQPL+VAVLA
Sbjct: 199 AHYSGKKQPSGLMAWLSVALFGLVDAGCFQGFLAEGLTRTSAGLGSVIIDSQPLTVAVLA 258

Query: 223 ALLFGESIGLVGAGGLVLGVIGLLLLEAPAF----------------DESNSSLWGSGEW 266
           A+ +GESIG +GA GLVLGVIGLLLLE PAF                 +S S+LWGSGEW
Sbjct: 259 AIFYGESIGTIGAAGLVLGVIGLLLLEVPAFYGNDISETVVSQSEVVQKSISTLWGSGEW 318

Query: 267 WMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELT 326
           WMLLAAQSMAVGTVMVRWV KYSDPVMATGWHM+IGGLPL+V+SV+ HDP +  S++EL 
Sbjct: 319 WMLLAAQSMAVGTVMVRWVCKYSDPVMATGWHMIIGGLPLLVLSVIKHDPAFTGSLQELD 378

Query: 327 SSDILALLYTSIFGSAISYGVYFYSATKG 355
             D LAL+YTSIFGSAISYGVYFY+AT+G
Sbjct: 379 YGDWLALIYTSIFGSAISYGVYFYNATRG 407

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224119940|ref|XP_002318202.1| predicted protein [Populus trichocarpa] gi|222858875|gb|EEE96422.1| predicted protein [Populus trichocarpa]

 Score =  355 bits (912), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 191/226 (84%), Positives = 205/226 (90%), Gaps = 2/226 (0%)

Query: 132 MVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCF 191
           MVAMKEVLP  G FFV++FRLIPAGLLL+ FA  +GR LPSG  AW++I LFALVDASCF
Sbjct: 1   MVAMKEVLPLTGPFFVSSFRLIPAGLLLVAFAGFKGRPLPSGLTAWLTITLFALVDASCF 60

Query: 192 QGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAP 251
           QGFLAQGLQRTSAGLGSVIIDSQPL+VA+LA LLFGESIG+VGA GLVLGVIGLLLLE P
Sbjct: 61  QGFLAQGLQRTSAGLGSVIIDSQPLTVAILANLLFGESIGIVGASGLVLGVIGLLLLEVP 120

Query: 252 A--FDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVI 309
              FDESN SLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPL+ I
Sbjct: 121 TLTFDESNFSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLLAI 180

Query: 310 SVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKG 355
           SVLNHDP +  S+K+LT+SDILALLYTSIFGSAISYGVYFYSATKG
Sbjct: 181 SVLNHDPAFNLSLKDLTASDILALLYTSIFGSAISYGVYFYSATKG 226

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	356
TAIR|locus:2076954	417	AT3G02690 [Arabidopsis thalian	0.814	0.695	0.666	7.9e-101
UNIPROTKB|Q3Z7M8	287	DET1056 "Membrane protein, put	0.634	0.787	0.248	1.6e-10
TIGR_CMR|DET_1056	287	DET_1056 "membrane protein, pu	0.634	0.787	0.248	1.6e-10
TIGR_CMR|SPO_3584	306	SPO_3584 "membrane protein, dr	0.264	0.307	0.297	3.6e-08
UNIPROTKB|Q3AAZ7	303	CHY_1867 "Putative membrane pr	0.553	0.650	0.248	7.1e-07
TIGR_CMR|CHY_1867	303	CHY_1867 "putative membrane pr	0.553	0.650	0.248	7.1e-07
UNIPROTKB|P0AA70	306	yedA "putative membrane transp	0.637	0.741	0.243	2.1e-06
UNIPROTKB|Q8E8X4	284	SO_4527 "10 TMS drug/metabolit	0.275	0.345	0.285	4.7e-06
TIGR_CMR|SO_4527	284	SO_4527 "integral membrane dom	0.275	0.345	0.285	4.7e-06
TIGR_CMR|BA_0829	303	BA_0829 "transporter, EamA fam	0.612	0.719	0.208	0.00011

TAIR|locus:2076954 AT3G02690 [Arabidopsis thaliana (taxid:3702)]

 Score = 1000 (357.1 bits), Expect = 7.9e-101, P = 7.9e-101
 Identities = 198/297 (66%), Positives = 230/297 (77%)

Query:    61 TNCTTTNKKNMESSSTVDCVETGTDVECLISPTDKEEIEQEQVEQDGQVMELGMLLEWAV 120
             +N +T   ++  SSS+VDCV  G+DVEC+ +  D EE     +   G+    G  LEW V
Sbjct:    73 SNNSTEETESSSSSSSVDCVGMGSDVECVNNGED-EENRSSGILSGGE----GTFLEWTV 127

Query:   121 LVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSI 180
             L+SPFFFWGTAMVAMKEVLP  G FFVAAFRLIPAGLLL+ FA  +GR LP G NAW SI
Sbjct:   128 LISPFFFWGTAMVAMKEVLPITGPFFVAAFRLIPAGLLLVAFAVYKGRPLPEGINAWFSI 187

Query:   181 FLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESXXXXXXXXXXX 240
              LFALVDA+CFQGFLAQGLQRTSAGLGSVIIDSQPL+VAVLA+ LFGES           
Sbjct:   188 ALFALVDATCFQGFLAQGLQRTSAGLGSVIIDSQPLTVAVLASFLFGESIGIVRAGGLLL 247

Query:   241 XXXXXXXXEAPAF--DESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWH 298
                     E P+   D +N SLWGSGEWWMLLAAQSMA+GTVMVRWVSKYSDP+MATGWH
Sbjct:   248 GVAGLLLLEVPSVTSDGNNFSLWGSGEWWMLLAAQSMAIGTVMVRWVSKYSDPIMATGWH 307

Query:   299 MVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKG 355
             MVIGGLPL+ ISV+NHDPV+  S+++L+++D++ALLYTSIFGSA+SYGVYFYSATKG
Sbjct:   308 MVIGGLPLLAISVINHDPVFNGSLQDLSTNDVIALLYTSIFGSAVSYGVYFYSATKG 364

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016020 "membrane" evidence=IEA;ISS

UNIPROTKB|Q3Z7M8 DET1056 "Membrane protein, putative" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 168 (64.2 bits), Expect = 1.6e-10, P = 1.6e-10
 Identities = 59/237 (24%), Positives = 102/237 (43%)

Query:   121 LVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSI 180
             L+    FW +A  A++  L       +A  R + A L L+ +A     +LP   +   +I
Sbjct:     9 LIFTILFWSSAFAAIRVSLADYSPSHLALLRFLVASLALVIYALITRMRLPDKRDL-PAI 67

Query:   181 FLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESXXXXXXXXXXX 240
             FL  L+  S +   L  G +  +AG  S+II S P+   +LA   + +            
Sbjct:    68 FLLGLIGISLYHFALNYGEKTVTAGAASLIIASAPIFSVLLARFFYKDKLTPAGWLGILL 127

Query:   241 XXXXXXXXEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVR-WVSKYSDPVMATGWHM 299
                           E  +  +    +W+LLAA   ++  V  R  + KYS    +T  + 
Sbjct:   128 SFGGIAVI---TLGEGQTLSFEPHAFWVLLAALFTSIYIVFQRPLLKKYSGFEFST--YA 182

Query:   300 VIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGK 356
             +  G  L+++      P   + + E  +S  LA++Y  IF +AISY +Y Y+ +K +
Sbjct:   183 IWAGTLLLMVGA----PGLLKEISEAPASSTLAVVYLGIFPTAISYLLYSYALSKAR 235

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|DET_1056 DET_1056 "membrane protein, putative" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 168 (64.2 bits), Expect = 1.6e-10, P = 1.6e-10
 Identities = 59/237 (24%), Positives = 102/237 (43%)

Query:   121 LVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSI 180
             L+    FW +A  A++  L       +A  R + A L L+ +A     +LP   +   +I
Sbjct:     9 LIFTILFWSSAFAAIRVSLADYSPSHLALLRFLVASLALVIYALITRMRLPDKRDL-PAI 67

Query:   181 FLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESXXXXXXXXXXX 240
             FL  L+  S +   L  G +  +AG  S+II S P+   +LA   + +            
Sbjct:    68 FLLGLIGISLYHFALNYGEKTVTAGAASLIIASAPIFSVLLARFFYKDKLTPAGWLGILL 127

Query:   241 XXXXXXXXEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVR-WVSKYSDPVMATGWHM 299
                           E  +  +    +W+LLAA   ++  V  R  + KYS    +T  + 
Sbjct:   128 SFGGIAVI---TLGEGQTLSFEPHAFWVLLAALFTSIYIVFQRPLLKKYSGFEFST--YA 182

Query:   300 VIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGK 356
             +  G  L+++      P   + + E  +S  LA++Y  IF +AISY +Y Y+ +K +
Sbjct:   183 IWAGTLLLMVGA----PGLLKEISEAPASSTLAVVYLGIFPTAISYLLYSYALSKAR 235

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

TIGR_CMR|SPO_3584 SPO_3584 "membrane protein, drug/metabolite transporter (DMT) family" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 112 (44.5 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
 Identities = 30/101 (29%), Positives = 46/101 (45%)

Query:   128 WGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVS-IFLFALV 186
             WG++     + LP    F VA  R +PAGLLL+       RKLP     W+  + +   +
Sbjct:    21 WGSSYFVTTQFLPAHSPFVVALLRALPAGLLLMLLV----RKLPP--RGWIGRLLILGAL 74

Query:   187 DASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFG 227
             + + F   L     R   G+ + +   QPL V  L+A+  G
Sbjct:    75 NFAVFWSLLFVAAYRLPGGVAATVGAVQPLLVVFLSAVALG 115

GO:0005215 "transporter activity" evidence=ISS

GO:0006810 "transport" evidence=ISS

GO:0016020 "membrane" evidence=ISS

UNIPROTKB|Q3AAZ7 CHY_1867 "Putative membrane protein" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 138 (53.6 bits), Expect = 7.1e-07, P = 7.1e-07
 Identities = 52/209 (24%), Positives = 89/209 (42%)

Query:   145 FFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSA 204
             FF   F L+P  L  I     +  KL +G + ++  FL  L++      FL  G+  T A
Sbjct:    39 FFFGGFVLLPVALSNI---KRKNVKL-TGSD-FLFAFLIGLLNVVLSMSFLQIGINMTKA 93

Query:   205 GLGSVIIDSQPLSVAVLAALLFGESXXXXXXXXXXXXXXXXXXXEAPAFDESNSSLWGSG 264
              L + I  S PL V + A L+  E                         +   S ++G  
Sbjct:    94 SLAAAIFSSNPLFVVLFAYLILDEKLNFQKILGLFIGIVGVVIVFYKDLELGISHVYGI- 152

Query:   265 EWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKE 324
                ++LAA +  + TV+ +  S+ +D V+   +  ++G + L+ I +L H P++      
Sbjct:   153 -LMLILAAVTYGLYTVLGKRFSQKTDSVIMNSFSFILGSVFLLPIILLKHYPLFS----- 206

Query:   325 LTSSDILALLYTSIFGSAISYGVYFYSAT 353
             L    IL + Y + F + ++Y  YF   T
Sbjct:   207 LQPKAILPMAYLTFFVTGLAYYTYFLGLT 235

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|CHY_1867 CHY_1867 "putative membrane protein" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 138 (53.6 bits), Expect = 7.1e-07, P = 7.1e-07
 Identities = 52/209 (24%), Positives = 89/209 (42%)

Query:   145 FFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSA 204
             FF   F L+P  L  I     +  KL +G + ++  FL  L++      FL  G+  T A
Sbjct:    39 FFFGGFVLLPVALSNI---KRKNVKL-TGSD-FLFAFLIGLLNVVLSMSFLQIGINMTKA 93

Query:   205 GLGSVIIDSQPLSVAVLAALLFGESXXXXXXXXXXXXXXXXXXXEAPAFDESNSSLWGSG 264
              L + I  S PL V + A L+  E                         +   S ++G  
Sbjct:    94 SLAAAIFSSNPLFVVLFAYLILDEKLNFQKILGLFIGIVGVVIVFYKDLELGISHVYGI- 152

Query:   265 EWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKE 324
                ++LAA +  + TV+ +  S+ +D V+   +  ++G + L+ I +L H P++      
Sbjct:   153 -LMLILAAVTYGLYTVLGKRFSQKTDSVIMNSFSFILGSVFLLPIILLKHYPLFS----- 206

Query:   325 LTSSDILALLYTSIFGSAISYGVYFYSAT 353
             L    IL + Y + F + ++Y  YF   T
Sbjct:   207 LQPKAILPMAYLTFFVTGLAYYTYFLGLT 235

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

UNIPROTKB|P0AA70 yedA "putative membrane transport protein" [Escherichia coli K-12 (taxid:83333)]

 Score = 134 (52.2 bits), Expect = 2.1e-06, P = 2.1e-06
 Identities = 60/246 (24%), Positives = 103/246 (41%)

Query:   110 MELGMLLE-WAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGR 168
             M    LL  +  L + +  WG+    ++  +       +A  R + AG+LL+ F   +G 
Sbjct:     1 MRFRQLLPLFGALFALYIIWGSTYFVIRIGVESWPPLMMAGVRFLAAGILLLAFLLLRGH 60

Query:   169 KLPSGFNAWVSIFLFALVDASCFQGFLAQGL-QRTSAGLGSVIIDSQPLSVAVLAALLFG 227
             KLP      ++  L  L+  +   G +     Q   +G+ +V++ + PL     + L FG
Sbjct:    61 KLPP-LRPLLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FG 118

Query:   228 ESXXXXXXXXXXXXXXXXXXXEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSK 287
                                   +      N   WG+    +L+ + S A G+V   + S+
Sbjct:   119 IKTRKLEWVGIAIGLAGIIMLNSGGNLSGNP--WGA--ILILIGSISWAFGSV---YGSR 171

Query:   288 YSDPV--MATGWHMVIGGLPLMVISVLNHDPVYGESVKELTS-SDILALLYTSIFGSAIS 344
              + PV  MA    M+  G+ LM+ S+     + GE +  L S S  LA+ Y ++FGS I+
Sbjct:   172 ITLPVGMMAGAIEMLAAGVVLMIASM-----IAGEKLTALPSLSGFLAVGYLALFGSIIA 226

Query:   345 YGVYFY 350
                Y Y
Sbjct:   227 INAYMY 232

GO:0055085 "transmembrane transport" evidence=IMP;RCA

GO:0022857 "transmembrane transporter activity" evidence=IMP;RCA

GO:0005886 "plasma membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA;RCA

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|Q8E8X4 SO_4527 "10 TMS drug/metabolite efflux pump (DME) family" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 99 (39.9 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
 Identities = 30/105 (28%), Positives = 48/105 (45%)

Query:   121 LVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSI 180
             L++P F WGT    +   L     ++VA +R +PAG+LL+        +LP+   AW  +
Sbjct:     7 LLAPVF-WGTTYALVSLYLQDMSPYWVAVWRALPAGVLLLMLRP----RLPT--LAWSKL 59

Query:   181 FLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALL 225
              L A  +   F   L  G  R    +   +  + PL   +LA L+
Sbjct:    60 SLLAFCNIGAFFTLLFIGAYRLPGAVAGTLGATLPLIFLILAWLI 104

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|SO_4527 SO_4527 "integral membrane domain protein" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 99 (39.9 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
 Identities = 30/105 (28%), Positives = 48/105 (45%)

Query:   121 LVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSI 180
             L++P F WGT    +   L     ++VA +R +PAG+LL+        +LP+   AW  +
Sbjct:     7 LLAPVF-WGTTYALVSLYLQDMSPYWVAVWRALPAGVLLLMLRP----RLPT--LAWSKL 59

Query:   181 FLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALL 225
              L A  +   F   L  G  R    +   +  + PL   +LA L+
Sbjct:    60 SLLAFCNIGAFFTLLFIGAYRLPGAVAGTLGATLPLIFLILAWLI 104

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

TIGR_CMR|BA_0829 BA_0829 "transporter, EamA family" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 119 (46.9 bits), Expect = 0.00011, P = 0.00011
 Identities = 47/225 (20%), Positives = 92/225 (40%)

Query:   120 VLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVS 179
             +L+     WG   V  K ++  A    + + R I A + L+     + +K+     A + 
Sbjct:     8 LLLLTSLLWGGNFVVGKSLVDHASPMTLTSLRWIIAIVCLLPMVWFKEKKIIPPRAAILP 67

Query:   180 IFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESXXXXXXXXXX 239
             + L  +   + F  F    L++TSA    +I     +S+A+ + L   E           
Sbjct:    68 LILMGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMI 127

Query:   240 XXXXXXXXXEAPA-FDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWH 298
                           F    S  + SG+ WM+ A     + +V  +W +K + P+MAT + 
Sbjct:   128 LSFFGVILVLLKGNFALLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYS 187

Query:   299 MVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAI 343
              + G + L+  ++ +       +V  + +S I +LLYT +  + +
Sbjct:   188 GIFGVILLLPFNIGSF------TVTNINTSFITSLLYTGLISTVL 226

GO:0005215 "transporter activity" evidence=ISS

GO:0006810 "transport" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q93V85	WTR16_ARATH	No assigned EC number	0.7366	0.7696	0.6570	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh2_kg.3__210__AT3G02690.1 annotation not avaliable (424 aa) (Arabidopsis lyrata)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	356
TIGR00950	260	TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Tran	5e-17
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	1e-16
pfam00892	126	pfam00892, EamA, EamA-like transporter family	3e-15
PRK11272	292	PRK11272, PRK11272, putative DMT superfamily trans	5e-13
PRK11453	299	PRK11453, PRK11453, O-acetylserine/cysteine export	4e-06
pfam00892	126	pfam00892, EamA, EamA-like transporter family	2e-05
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	2e-04
pfam03151	149	pfam03151, TPT, Triose-phosphate Transporter famil	0.002
COG3264	835	COG3264, COG3264, Small-conductance mechanosensiti	0.004

>gnl|CDD|233205 TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Transporter

 Score = 79.3 bits (196), Expect = 5e-17
 Identities = 54/229 (23%), Positives = 94/229 (41%), Gaps = 16/229 (6%)

Query: 128 WGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVD 187
           WGT  V + + L      + A FR +   LLL+        +        + + L   + 
Sbjct: 1   WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPL----LRRRPPLKRLLRLLLLGALQ 56

Query: 188 ASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLL 247
              F       ++R   G  ++++   PL V +L+ L+  E    +     VLG+ G +L
Sbjct: 57  IGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVL 116

Query: 248 LEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMV-RWVSKYSDP-VMATGWHMVIGGLP 305
           L      + N S+  +G    L +  S A+GTV+  R V K     +  TGW +++G L 
Sbjct: 117 L----LSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALL 172

Query: 306 LMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATK 354
           L+  +             +  S    ALLY  + G+A++Y ++    T 
Sbjct: 173 LLPFAWFL------GPNPQALSLQWGALLYLGLIGTALAYFLWNKGLTL 215

[Transport and binding proteins, Amino acids, peptides and amines]. Length = 260

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 79.1 bits (195), Expect = 1e-16
 Identities = 66/248 (26%), Positives = 112/248 (45%), Gaps = 11/248 (4%)

Query: 110 MELGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAF-RLIPAGLLLITFASSQGR 168
           M+  +LL    L+     WG + +A+K  +     F  AA  R + A LLL+     + R
Sbjct: 1   MKRALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPR 60

Query: 169 KLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLF-G 227
            L      W+ + L AL+  +     L   L+ TSA + S+II   PL  A+LA LL  G
Sbjct: 61  GLRPALRPWLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLG 120

Query: 228 ESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSK 287
           E + L+   G++L + G+LL+          SL   G    L AA   A+ T +V+ +S+
Sbjct: 121 ERLSLLQILGILLALAGVLLILLGGGGGGILSLL--GLLLALAAALLWALYTALVKRLSR 178

Query: 288 YSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGV 347
                +A    +++  L L++  +             + S   L LLY  +F + ++Y +
Sbjct: 179 LGPVTLALLLQLLLALLLLLLFFLSGFGAP-------ILSRAWLLLLYLGVFSTGLAYLL 231

Query: 348 YFYSATKG 355
           ++Y+    
Sbjct: 232 WYYALRLL 239

Length = 292

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 71.1 bits (175), Expect = 3e-15
 Identities = 32/124 (25%), Positives = 53/124 (42%), Gaps = 1/124 (0%)

Query: 126 FFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPS-GFNAWVSIFLFA 184
             W    V  K++L +       A+R + AG+LLI       +        A +++    
Sbjct: 1   LSWALYFVFSKKLLERISPLTFTAYRFLIAGILLILLLFLLRKPFALLSLKAILALLYLG 60

Query: 185 LVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIG 244
           L   +         L+  SA   SVI    P+   +L+ LL GE + L    G+VL ++G
Sbjct: 61  LFGTALGYLLYFYALKYVSASNASVITSLSPVFTLILSVLLLGEKLTLKQLLGIVLILLG 120

Query: 245 LLLL 248
           +LL+
Sbjct: 121 VLLI 124

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

>gnl|CDD|183067 PRK11272, PRK11272, putative DMT superfamily transporter inner membrane protein; Provisional

 Score = 68.5 bits (168), Expect = 5e-13
 Identities = 68/243 (27%), Positives = 119/243 (48%), Gaps = 24/243 (9%)

Query: 115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGF 174
           L  +  L + +  WG+  + ++  +       +A  R + AG+LL+ F   +G  LP+  
Sbjct: 7   LPLFGALFALYIIWGSTYLVIRIGVESWPPLMMAGVRFLIAGILLLAFLLLRGHPLPT-L 65

Query: 175 NAWVSIFLFALVDASCFQGF--LAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGL 232
             W++  L  L+  +   G   +A+  Q   +G+ +V++ + PL   +  + LFG     
Sbjct: 66  RQWLNAALIGLLLLAVGNGMVTVAEH-QNVPSGIAAVVVATVPL-FTLCFSRLFGIRTRK 123

Query: 233 VGAGGLVLGVIGLLLLEAPAFDESNSSLWGS--GEWWMLLAAQSMAVGTVMVRWVSKYSD 290
           +   G+ +G+ G++LL       S  +L G+  G   +L+A+ S A G+V   W S+   
Sbjct: 124 LEWLGIAIGLAGIVLLN------SGGNLSGNPWGAILILIASASWAFGSV---WSSRLPL 174

Query: 291 PV--MATGWHMVIGGLPLMVISVLNHDPVYGESVKEL-TSSDILALLYTSIFGSAISYGV 347
           PV  MA    M+  G+ L++ S+L+     GE +  L T S  LAL Y ++FGS I+   
Sbjct: 175 PVGMMAGAAEMLAAGVVLLIASLLS-----GERLTALPTLSGFLALGYLAVFGSIIAISA 229

Query: 348 YFY 350
           Y Y
Sbjct: 230 YMY 232

Length = 292

>gnl|CDD|183142 PRK11453, PRK11453, O-acetylserine/cysteine export protein; Provisional

 Score = 47.5 bits (113), Expect = 4e-06
 Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 6/149 (4%)

Query: 204 AGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGS 263
           AGL S+++ +Q     VL A  FGE +      G+ L + G+L+L   + +  + ++   
Sbjct: 86  AGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAM--L 143

Query: 264 GEWWMLLAAQSMAVGTVMVRWVSKYSD--PVMA-TGWHMVIGGLPLMVISVLNHDP-VYG 319
           G    L AA S A G +  + +  +S    VM+   W  +I  +P  V S++        
Sbjct: 144 GFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMI 203

Query: 320 ESVKELTSSDILALLYTSIFGSAISYGVY 348
            S+  +  + IL+L+Y +   + + YG++
Sbjct: 204 HSLVTIDMTTILSLMYLAFVATIVGYGIW 232

Length = 299

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 43.4 bits (103), Expect = 2e-05
 Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 5/82 (6%)

Query: 274 SMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILAL 333
           S A+  V  + + +   P+  T +  +I G+ L+++  L       +    L+   ILAL
Sbjct: 2   SWALYFVFSKKLLERISPLTFTAYRFLIAGILLILLLFL-----LRKPFALLSLKAILAL 56

Query: 334 LYTSIFGSAISYGVYFYSATKG 355
           LY  +FG+A+ Y +YFY+    
Sbjct: 57  LYLGLFGTALGYLLYFYALKYV 78

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 42.5 bits (100), Expect = 2e-04
 Identities = 28/123 (22%), Positives = 46/123 (37%), Gaps = 1/123 (0%)

Query: 126 FFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFAL 185
             W      +K +            +L+ A LLL+ F  S     P    AW+ +    +
Sbjct: 164 LLWALYTALVKRLSRLGPVTLALLLQLLLALLLLLLFFLSGFG-APILSRAWLLLLYLGV 222

Query: 186 VDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGL 245
                        L+   A L +++   +P+  A+L  LL GE +      G  L V+G+
Sbjct: 223 FSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGV 282

Query: 246 LLL 248
           LL 
Sbjct: 283 LLA 285

Length = 292

>gnl|CDD|217390 pfam03151, TPT, Triose-phosphate Transporter family

 Score = 37.5 bits (88), Expect = 0.002
 Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 5/106 (4%)

Query: 146 FVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQG----LQR 201
            VA   L+P  L    F   +      G        L  L+                L R
Sbjct: 42  PVAFIVLLPGLLFSEGFKLGKFILKFFGDLKTSRYVLLLLLSGVLAF-LYNLSAFGLLGR 100

Query: 202 TSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLL 247
           TS    SV    + + V VL+ ++FG+ +  +   GL + ++G++L
Sbjct: 101 TSPLTSSVAGTVKRVVVIVLSVIIFGDPVTFLNILGLAIAILGVVL 146

This family includes transporters with a specificity for triose phosphate. Length = 149

>gnl|CDD|225803 COG3264, COG3264, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane]

 Score = 38.9 bits (91), Expect = 0.004
 Identities = 31/178 (17%), Positives = 56/178 (31%), Gaps = 26/178 (14%)

Query: 118 WAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAF---RLIPAGLLLITFASSQGRKLPSGF 174
           +  L+         +  +  V    G  + A F   RL+    +L T             
Sbjct: 421 YPRLLLITVLSAAPLALI--VAALTGYLYTALFLALRLVVTVAILFT------------- 465

Query: 175 NAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVG 234
             +V   L  L   S  +   A+ L   +    + +++   L    L  L     + L+ 
Sbjct: 466 -WYVLYILRGLS-VSARRLAFARALAGRALAEEAELVEVA-LDQIGLQLLRLIRLLLLLI 522

Query: 235 AGGLVLGVIGLLLLEAPAFDESNSSLWGSGE-----WWMLLAAQSMAVGTVMVRWVSK 287
           A  LVL V G  L +   +    ++    G        +L A     +  V+ R +  
Sbjct: 523 AIPLVLYVWGSYLEDITLWAYLGTTGGVLGVESITLGALLQAVLLFLITYVLTRNLPG 580

Length = 835

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	356
PRK11272	292	putative DMT superfamily transporter inner membran	99.95
PLN00411	358	nodulin MtN21 family protein; Provisional	99.94
PRK11689	295	aromatic amino acid exporter; Provisional	99.94
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.93
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.93
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.92
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.91
PRK15430	296	putative chloramphenical resistance permease RarD;	99.91
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.88
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.88
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.87
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.85
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.83
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.81
COG2962	293	RarD Predicted permeases [General function predict	99.74
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.71
COG2510	140	Predicted membrane protein [Function unknown]	99.7
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.69
KOG2765	416	consensus Predicted membrane protein [Function unk	99.62
KOG2766	336	consensus Predicted membrane protein [Function unk	99.59
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.57
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.46
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.44
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.39
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.31
PRK11272	292	putative DMT superfamily transporter inner membran	99.31
PRK11689	295	aromatic amino acid exporter; Provisional	99.26
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.22
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.2
PLN00411	358	nodulin MtN21 family protein; Provisional	99.2
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.11
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.03
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.03
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.99
PRK15430	296	putative chloramphenical resistance permease RarD;	98.98
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	98.93
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	98.91
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.9
KOG3912	372	consensus Predicted integral membrane protein [Gen	98.88
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.81
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.78
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.77
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	98.74
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.7
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.69
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	98.55
PRK13499	345	rhamnose-proton symporter; Provisional	98.54
KOG1443	349	consensus Predicted integral membrane protein [Fun	98.53
KOG1581	327	consensus UDP-galactose transporter related protei	98.48
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.47
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	98.46
KOG1580	337	consensus UDP-galactose transporter related protei	98.45
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	98.28
PRK09541	110	emrE multidrug efflux protein; Reviewed	98.17
COG2510	140	Predicted membrane protein [Function unknown]	98.11
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.05
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	98.02
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.99
COG2076	106	EmrE Membrane transporters of cations and cationic	97.98
KOG4510	346	consensus Permease of the drug/metabolite transpor	97.98
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.95
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.95
PRK11431	105	multidrug efflux system protein; Provisional	97.89
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	97.82
COG2962	293	RarD Predicted permeases [General function predict	97.79
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	97.77
KOG2765	416	consensus Predicted membrane protein [Function unk	97.67
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	97.64
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.6
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	97.53
KOG2922	335	consensus Uncharacterized conserved protein [Funct	97.46
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	97.34
KOG1581	327	consensus UDP-galactose transporter related protei	97.3
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	97.14
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	96.93
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	96.86
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	96.56
PRK13499	345	rhamnose-proton symporter; Provisional	96.53
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	96.5
KOG1580	337	consensus UDP-galactose transporter related protei	96.46
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	95.98
KOG1582	367	consensus UDP-galactose transporter related protei	95.61
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	95.06
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	94.59
PRK02237	109	hypothetical protein; Provisional	93.83
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	93.7
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	93.35
KOG1443	349	consensus Predicted integral membrane protein [Fun	93.29
KOG4831	125	consensus Unnamed protein [Function unknown]	93.06
KOG1582	367	consensus UDP-galactose transporter related protei	92.07
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	91.93
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	91.71
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	91.46
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	89.55
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	89.0
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	87.62
COG1742	109	Uncharacterized conserved protein [Function unknow	86.42
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	85.86
PF04342	108	DUF486: Protein of unknown function, DUF486; Inter	81.84
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	81.67

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.95  E-value=1.6e-24  Score=201.03  Aligned_cols=228  Identities=25%  Similarity=0.410  Sum_probs=190.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHHHHHHHH
Q 018398          118 WAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQ  197 (356)
Q Consensus       118 ~l~ll~aa~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  197 (356)
                      .+.++...++||++++..|...++++|.+++++|+..+.++++++...++++. .+++++......|.++...++.++++
T Consensus        10 ~~~~~~~~~iWg~~~~~~K~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~   88 (292)
T PRK11272         10 FGALFALYIIWGSTYLVIRIGVESWPPLMMAGVRFLIAGILLLAFLLLRGHPL-PTLRQWLNAALIGLLLLAVGNGMVTV   88 (292)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHhCCCC-CcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45678889999999999999888999999999999999999988877655443 34577888888888877777888999


Q ss_pred             Hh-hccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccCCCCCCCchhhHHHHHHHHHHHHHH
Q 018398          198 GL-QRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMA  276 (356)
Q Consensus       198 al-~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~G~llaLlaa~~~a  276 (356)
                      +. ++++++.++++.++.|+++++++++ +|||+++++++|++++++|+.++..++. .   +....|++++++++++|+
T Consensus        89 ~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~-~---~~~~~G~l~~l~a~~~~a  163 (292)
T PRK11272         89 AEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGN-L---SGNPWGAILILIASASWA  163 (292)
T ss_pred             HHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcc-c---ccchHHHHHHHHHHHHHH
Confidence            99 9999999999999999999999975 6999999999999999999998875431 1   122469999999999999


Q ss_pred             HHHHHHhhhccCCChHHHHHHHHHHHHHHHHHHHHhhcCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 018398          277 VGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGK  356 (356)
Q Consensus       277 ~~~v~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lgi~~s~l~~~l~~~al~~~g  356 (356)
                      +|.+..|+..++ ++...+++++.++.+...+.....+.+.    ....+...|..++++++++++++|.+|++++++.+
T Consensus       164 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~  238 (292)
T PRK11272        164 FGSVWSSRLPLP-VGMMAGAAEMLAAGVVLLIASLLSGERL----TALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVR  238 (292)
T ss_pred             HHHHHHHhcCCC-cchHHHHHHHHHHHHHHHHHHHHcCCcc----cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            999999998654 4456677888888888777766543321    12246678999999999999999999999999875

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.94  E-value=2.8e-24  Score=203.47  Aligned_cols=241  Identities=15%  Similarity=0.140  Sum_probs=190.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhhccC-CCHHHHHHHHHHHHHHHHHHHHHHhCC--CCC-CChHHHHHHHHHHHHHH
Q 018398          113 GMLLEWAVLVSPFFFWGTAMVAMKEVLPK-AGTFFVAAFRLIPAGLLLITFASSQGR--KLP-SGFNAWVSIFLFALVDA  188 (356)
Q Consensus       113 ~~~~g~l~ll~aa~~~~~~~~~~k~~~~~-~~p~~~~~~r~~~~~l~~~~~~~~~~~--~~~-~~~~~~~~~~~~g~~~~  188 (356)
                      ++.+.++.+++..+.++...++.|.+.+. ++|..+.++|+.+++++++++.+.+++  +.+ ..++++..+.+.|+++ 
T Consensus        10 ~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g-   88 (358)
T PLN00411         10 REAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLG-   88 (358)
T ss_pred             hccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHH-
Confidence            34567899999999999999999988874 999999999999999999998876543  222 2467788889999988 


Q ss_pred             HHHHHHHHHHhhccChhHHHHHHhhHHHHHHHHHHHH------hCCCCcHHHHHHHHHHHHHHHHhhccCCC--------
Q 018398          189 SCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALL------FGESIGLVGAGGLVLGVIGLLLLEAPAFD--------  254 (356)
Q Consensus       189 ~~~~~~~~~al~~~~~~~a~~i~~l~pv~~~il~~~~------l~e~~~~~~~~g~~l~~~Gv~ll~~~~~~--------  254 (356)
                      +.++.+++.+++++++++++++.++.|+++.++++++      +|||+++.+++|++++++|+.++...+..        
T Consensus        89 ~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~  168 (358)
T PLN00411         89 SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSP  168 (358)
T ss_pred             HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccccccc
Confidence            6777899999999999999999999999999999999      69999999999999999999988753211        


Q ss_pred             ------------CCCCchhhHHHHHHHHHHHHHHHHHHHHhhhccCCChH-HHHHHHHHHHHHHHHHHHHhhcCCCCCcc
Q 018398          255 ------------ESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPV-MATGWHMVIGGLPLMVISVLNHDPVYGES  321 (356)
Q Consensus       255 ------------~~~~~~~~~G~llaLlaa~~~a~~~v~~r~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  321 (356)
                                  ..+..+...|++++++++++|++|+++.|+..+++++. ..+++++.++.+...+..+..++......
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~  248 (358)
T PLN00411        169 PYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVW  248 (358)
T ss_pred             ccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccc
Confidence                        01112345699999999999999999999988777654 56677788777777766666543221111


Q ss_pred             cccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 018398          322 VKELTSSDILALLYTSIFGSAISYGVYFYSATKGK  356 (356)
Q Consensus       322 ~~~~~~~~~~~~~~lgi~~s~l~~~l~~~al~~~g  356 (356)
                      ....+.. ...++|.+++ +.++|.+|++++++.|
T Consensus       249 ~~~~~~~-~~~i~y~~i~-t~lay~lw~~~v~~~g  281 (358)
T PLN00411        249 IIHFDIT-LITIVTMAII-TSVYYVIHSWTVRHKG  281 (358)
T ss_pred             eeccchH-HHHHHHHHHH-HHHHHHHHHHHHhccC
Confidence            1223433 3457788865 6789999999999875

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.94  E-value=2.1e-24  Score=200.59  Aligned_cols=227  Identities=17%  Similarity=0.121  Sum_probs=173.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 018398          116 LEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFL  195 (356)
Q Consensus       116 ~g~l~ll~aa~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  195 (356)
                      +++++++++.++||.+++..|...++++|..+.++|+.++.++++++..  +++.   +++.++.++.+.+..+.++.++
T Consensus         4 ~~~l~~l~a~~~Wg~~~~~~k~~~~~~~P~~~~~~R~~~a~l~l~~~~~--~~~~---~~~~~~~~~~~~l~~~~~~~~~   78 (295)
T PRK11689          4 KATLIGLIAILLWSTMVGLIRGVSESLGPVGGAAMIYSVSGLLLLLTVG--FPRL---RQFPKRYLLAGGLLFVSYEICL   78 (295)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHcc--cccc---ccccHHHHHHHhHHHHHHHHHH
Confidence            4578899999999999999999999999999999999999998887641  1111   1223334455566656777777


Q ss_pred             HHHhh----ccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccCCCCC------CCchhhHHH
Q 018398          196 AQGLQ----RTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDES------NSSLWGSGE  265 (356)
Q Consensus       196 ~~al~----~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~~~~~------~~~~~~~G~  265 (356)
                      +.+++    ++++.+++++.++.|+++++++++++|||+++++++|++++++|++++..++.+.+      +......|+
T Consensus        79 ~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~  158 (295)
T PRK11689         79 ALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSY  158 (295)
T ss_pred             HHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHH
Confidence            77775    46888899999999999999999999999999999999999999999987652111      111224599


Q ss_pred             HHHHHHHHHHHHHHHHHhhhccCCChHHHHHHHHHHHHHHHHHHHHhhcCCCCCcccccCCHHHHHHHHHHHHHHHHHHH
Q 018398          266 WWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISY  345 (356)
Q Consensus       266 llaLlaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lgi~~s~l~~  345 (356)
                      +++++++++|++|+++.||..++.++.....   ..+.+...+.....+.+.     ...+...|..+++.+ ++++++|
T Consensus       159 ~~~l~aa~~~A~~~v~~k~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~l~~~~-~~t~~~~  229 (295)
T PRK11689        159 GLAFIGAFIWAAYCNVTRKYARGKNGITLFF---ILTALALWIKYFLSPQPA-----MVFSLPAIIKLLLAA-AAMGFGY  229 (295)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCCCCchhHHH---HHHHHHHHHHHHHhcCcc-----ccCCHHHHHHHHHHH-HHHHHHH
Confidence            9999999999999999999988888765422   223333333333332221     235667888888888 6899999


Q ss_pred             HHHHHHhccCC
Q 018398          346 GVYFYSATKGK  356 (356)
Q Consensus       346 ~l~~~al~~~g  356 (356)
                      .+|++++|+.+
T Consensus       230 ~l~~~al~~~~  240 (295)
T PRK11689        230 AAWNVGILHGN  240 (295)
T ss_pred             HHHHHHHHccC
Confidence            99999999875

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.93  E-value=1.3e-23  Score=195.74  Aligned_cols=230  Identities=21%  Similarity=0.314  Sum_probs=173.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHHHHHHHH
Q 018398          118 WAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQ  197 (356)
Q Consensus       118 ~l~ll~aa~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  197 (356)
                      .++.++++++||.++++.|...++++|..+.++|+.++++.++++..+  ++.  +   +...+..|++.....+.+++.
T Consensus         6 ~l~~l~~~~~Wg~~~~~~k~~~~~~~p~~~~~~R~~~a~~~l~~~~~~--~~~--~---~~~~~~~g~~~~~~~~~~~~~   78 (299)
T PRK11453          6 GVLALLVVVVWGLNFVVIKVGLHNMPPLMLAGLRFMLVAFPAIFFVAR--PKV--P---LNLLLGYGLTISFGQFAFLFC   78 (299)
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhcC--CCC--c---hHHHHHHHHHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999988776665421  111  1   223444455554556667788


Q ss_pred             Hhhc-cChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccCCCCCCCchhhHHHHHHHHHHHHHH
Q 018398          198 GLQR-TSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMA  276 (356)
Q Consensus       198 al~~-~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~G~llaLlaa~~~a  276 (356)
                      ++++ .++++++++.++.|+++++++++++|||+++++++|++++++|+.++..++.++  ......|++++++++++|+
T Consensus        79 ~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~--~~~~~~G~~l~l~aal~~a  156 (299)
T PRK11453         79 AINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNG--QHVAMLGFMLTLAAAFSWA  156 (299)
T ss_pred             HHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCC--cchhHHHHHHHHHHHHHHH
Confidence            9998 588999999999999999999999999999999999999999999998654222  1222469999999999999


Q ss_pred             HHHHHHhhhccCCCh---HHHHHHHHHHHHHHHHHHHHhhcCCCC-CcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 018398          277 VGTVMVRWVSKYSDP---VMATGWHMVIGGLPLMVISVLNHDPVY-GESVKELTSSDILALLYTSIFGSAISYGVYFYSA  352 (356)
Q Consensus       277 ~~~v~~r~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~lgi~~s~l~~~l~~~al  352 (356)
                      +|.++.|+..++.+.   .....+....+.+.........+++.. ...+...+...|..++|+++++++++|.+|++++
T Consensus       157 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l  236 (299)
T PRK11453        157 CGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLL  236 (299)
T ss_pred             HHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999997655443   233445555555444444444333211 0112345778899999999999999999999999


Q ss_pred             ccCC
Q 018398          353 TKGK  356 (356)
Q Consensus       353 ~~~g  356 (356)
                      ++.+
T Consensus       237 ~~~~  240 (299)
T PRK11453        237 GRYE  240 (299)
T ss_pred             HhCC
Confidence            8864

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.93  E-value=2.2e-23  Score=190.16  Aligned_cols=214  Identities=25%  Similarity=0.345  Sum_probs=180.7

Q ss_pred             HHHHHHHHhhhcc-CCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhhccChhH
Q 018398          128 WGTAMVAMKEVLP-KAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGL  206 (356)
Q Consensus       128 ~~~~~~~~k~~~~-~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~  206 (356)
                      ||.+++..|...+ ..++.++.+.|+..+.+++.++...+     .+++++.++...|.++.+.++.++++|++++++++
T Consensus         1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~   75 (260)
T TIGR00950         1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR-----PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGE   75 (260)
T ss_pred             CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc-----cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh
Confidence            8899999999876 48899999999999888888776543     23467778888899888999999999999999999


Q ss_pred             HHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhhhc
Q 018398          207 GSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVS  286 (356)
Q Consensus       207 a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~G~llaLlaa~~~a~~~v~~r~~~  286 (356)
                      ++++.++.|+++++++++++|||+++++++|++++++|+.++..++ +   .+....|++++++++++|+++.+..|+..
T Consensus        76 ~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~-~---~~~~~~G~~~~l~a~~~~a~~~~~~k~~~  151 (260)
T TIGR00950        76 AALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDG-N---LSINPAGLLLGLGSGISFALGTVLYKRLV  151 (260)
T ss_pred             hHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCC-c---ccccHHHHHHHHHHHHHHHHHHHHHhHHh
Confidence            9999999999999999999999999999999999999999987654 1   12335799999999999999999999988


Q ss_pred             cCCChH--HHHHHHHHHHHHHHHHHHHhhcCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 018398          287 KYSDPV--MATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGK  356 (356)
Q Consensus       287 ~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lgi~~s~l~~~l~~~al~~~g  356 (356)
                      ++.++.  ....+.+.++.++..+.....++..      ..+...|..++++++++++++|.+|++++++.+
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  217 (260)
T TIGR00950       152 KKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP------QALSLQWGALLYLGLIGTALAYFLWNKGLTLVD  217 (260)
T ss_pred             hcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC------CcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            777744  4555678888888888777654332      235677888999999999999999999999865

>TIGR00688 rarD rarD protein

Probab=99.92  E-value=1.6e-22  Score=184.25  Aligned_cols=224  Identities=13%  Similarity=0.018  Sum_probs=163.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHhCCC------CC-CChHH-HHHHHHHHHHH
Q 018398          116 LEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRK------LP-SGFNA-WVSIFLFALVD  187 (356)
Q Consensus       116 ~g~l~ll~aa~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~------~~-~~~~~-~~~~~~~g~~~  187 (356)
                      +|+++.++++++||++.++.|.. ++++|.++.++|+.++.++++++...++++      .+ ..+++ +..+...|++ 
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~-~~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLL-KPLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL-   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHh-ccCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH-
Confidence            37889999999999999999984 569999999999999998887776443321      11 11233 3344555555 


Q ss_pred             HHHHHHHHHHHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccCCCCCCCchhhHHHHH
Q 018398          188 ASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWW  267 (356)
Q Consensus       188 ~~~~~~~~~~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~G~ll  267 (356)
                      .+.++.++++|++++++++++++.++.|+++++++++++|||++++++++++++++|++++..++.     +.    .++
T Consensus        80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~-----~~----~~~  150 (256)
T TIGR00688        80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKG-----SL----PWE  150 (256)
T ss_pred             HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcC-----Cc----hHH
Confidence            478899999999999999999999999999999999999999999999999999999998876431     11    146


Q ss_pred             HHHHHHHHHHHHHHHhhhccCCChHHHHHHHHHHHHHHHHHHHHhhcCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHH
Q 018398          268 MLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGV  347 (356)
Q Consensus       268 aLlaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lgi~~s~l~~~l  347 (356)
                      +++++++|++|.+..|+..++ +....... .+.......+.....+.+..   ........|..++++|++ +.++|.+
T Consensus       151 ~l~aa~~~a~~~i~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~g~~-t~i~~~l  224 (256)
T TIGR00688       151 ALVLAFSFTAYGLIRKALKNT-DLAGFCLE-TLSLMPVAIYYLLQTDFATV---QQTNPFPIWLLLVLAGLI-TGTPLLA  224 (256)
T ss_pred             HHHHHHHHHHHHHHHhhcCCC-CcchHHHH-HHHHHHHHHHHHHHhccCcc---cccCchhHHHHHHHHHHH-HHHHHHH
Confidence            789999999999999998653 33222211 12222222222222121110   011122478888888865 8999999


Q ss_pred             HHHHhccCC
Q 018398          348 YFYSATKGK  356 (356)
Q Consensus       348 ~~~al~~~g  356 (356)
                      |++++|+.+
T Consensus       225 ~~~a~~~~~  233 (256)
T TIGR00688       225 FVIAANRLP  233 (256)
T ss_pred             HHHHHHcCC
Confidence            999999875

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.91  E-value=5.6e-22  Score=184.10  Aligned_cols=224  Identities=18%  Similarity=0.152  Sum_probs=179.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 018398          115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGF  194 (356)
Q Consensus       115 ~~g~l~ll~aa~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  194 (356)
                      .+++.+++++.++|+.+..+.|++.++++|.++.++|+.++.++++++...++.  +.+++++...+..|++. +..+.+
T Consensus        11 ~~~~~~~~la~~~~~~~~~~~K~~~~~~~~~~~~~~R~~~a~l~l~~~~~~~~~--~~~~~~~~~~~~~g~~~-~~~~~~   87 (293)
T PRK10532         11 WLPILLLLIAMASIQSGASLAKSLFPLVGAPGVTALRLALGTLILIAIFKPWRL--RFAKEQRLPLLFYGVSL-GGMNYL   87 (293)
T ss_pred             chHHHHHHHHHHHHHhhHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhHHhc--cCCHHHHHHHHHHHHHH-HHHHHH
Confidence            568999999999999999999999999999999999999999998877644332  23457777777888775 777888


Q ss_pred             HHHHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccCCCCCCCchhhHHHHHHHHHHHH
Q 018398          195 LAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQS  274 (356)
Q Consensus       195 ~~~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~G~llaLlaa~~  274 (356)
                      +++++++++++.++++.++.|+++.+++    +|++.+  ..++.++++|++++..++.+..+  ....|++++++++++
T Consensus        88 ~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~--~~~~~i~~~Gv~li~~~~~~~~~--~~~~G~ll~l~aa~~  159 (293)
T PRK10532         88 FYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVD--FVWVVLAVLGLWFLLPLGQDVSH--VDLTGAALALGAGAC  159 (293)
T ss_pred             HHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHH--HHHHHHHHHHHheeeecCCCccc--CChHHHHHHHHHHHH
Confidence            9999999999999999999999998887    366554  45667889999988754422221  224699999999999


Q ss_pred             HHHHHHHHhhhccCCChHHHHHHHHHHHHHHHHHHHHhhcCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 018398          275 MAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATK  354 (356)
Q Consensus       275 ~a~~~v~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lgi~~s~l~~~l~~~al~~  354 (356)
                      |++|.+..|+..++.++... .+..++++++..++....+..      ...+...|..++|+|+++++++|.+|+++++|
T Consensus       160 ~a~~~v~~r~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~------~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~  232 (293)
T PRK10532        160 WAIYILSGQRAGAEHGPATV-AIGSLIAALIFVPIGALQAGE------ALWHWSILPLGLAVAILSTALPYSLEMIALTR  232 (293)
T ss_pred             HHHHHHHHHHHhccCCchHH-HHHHHHHHHHHHHHHHHccCc------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999888888776 466677777777766654321      22456677778899999999999999999998


Q ss_pred             CC
Q 018398          355 GK  356 (356)
Q Consensus       355 ~g  356 (356)
                      .+
T Consensus       233 ~~  234 (293)
T PRK10532        233 LP  234 (293)
T ss_pred             cC
Confidence            75

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.91  E-value=8.2e-22  Score=183.29  Aligned_cols=226  Identities=15%  Similarity=0.094  Sum_probs=163.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCC-----CChHHHHHHHHHHHHHH
Q 018398          114 MLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLP-----SGFNAWVSIFLFALVDA  188 (356)
Q Consensus       114 ~~~g~l~ll~aa~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~-----~~~~~~~~~~~~g~~~~  188 (356)
                      +.+|.++.++++++||.+++..|.. ++++|.++.++|+.++.++++++...+++...     .+++++ .....+.++.
T Consensus         6 ~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   83 (296)
T PRK15430          6 TRQGVLLALAAYFIWGIAPAYFKLI-YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKI-FMLAVSAVLI   83 (296)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHH-HHHHHHHHHH
Confidence            3678999999999999999999986 57999999999999999888777655432111     122333 2334666777


Q ss_pred             HHHHHHHHHHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccCCCCCCCchhhHHHHHH
Q 018398          189 SCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWM  268 (356)
Q Consensus       189 ~~~~~~~~~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~G~lla  268 (356)
                      +.++.++++|++++++++++++.++.|+++++++++++|||+++++++|++++++|++++..++.     +.    .+++
T Consensus        84 ~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~-----~~----~~~~  154 (296)
T PRK15430         84 GGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFG-----SL----PIIA  154 (296)
T ss_pred             HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcC-----Cc----cHHH
Confidence            88899999999999999999999999999999999999999999999999999999999886431     11    2468


Q ss_pred             HHHHHHHHHHHHHHhhhccCCC--hHHHHHHHHHHHHHHHHHHHHhhcCCCCCcccccCCHHHHHHHHHHHHHHHHHHHH
Q 018398          269 LLAAQSMAVGTVMVRWVSKYSD--PVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYG  346 (356)
Q Consensus       269 Llaa~~~a~~~v~~r~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lgi~~s~l~~~  346 (356)
                      ++++++|+.|++..|+..++..  ......+...++.+...+.   .+.+..  .........+..+++.+ +++.++|.
T Consensus       155 l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~g-~~t~i~~~  228 (296)
T PRK15430        155 LGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI---ADSSTS--HMGQNPMSLNLLLIAAG-IVTTVPLL  228 (296)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH---ccCCcc--cccCCcHHHHHHHHHHH-HHHHHHHH
Confidence            8899999999999999754322  2233334444443332211   111110  01111222333444445 57889999


Q ss_pred             HHHHHhccCC
Q 018398          347 VYFYSATKGK  356 (356)
Q Consensus       347 l~~~al~~~g  356 (356)
                      +|++++++.+
T Consensus       229 ~~~~a~~~~~  238 (296)
T PRK15430        229 CFTAAATRLR  238 (296)
T ss_pred             HHHHHHhcCC
Confidence            9999999875

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.88  E-value=3e-20  Score=171.52  Aligned_cols=228  Identities=18%  Similarity=0.181  Sum_probs=165.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHh--CCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 018398          118 WAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQ--GRKLPSGFNAWVSIFLFALVDASCFQGFL  195 (356)
Q Consensus       118 ~l~ll~aa~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  195 (356)
                      .++.++++++|+...+..|...++.++.  .+++.....++++|+...+  +...+..+++++..+..+.++...++.++
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKEPDF--LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGL   80 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCchhHH--HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHH
Confidence            4677999999999999999666654443  4666777777777777654  22333333455555566666668889999


Q ss_pred             HHHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccCCCCCCCchhhHHHHHHHHHHHHH
Q 018398          196 AQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSM  275 (356)
Q Consensus       196 ~~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~G~llaLlaa~~~  275 (356)
                      ++|+++.+++.++++.++.|+++++++++++|||+++++++|++++++|++++..++.+.    ....|+.++++++++|
T Consensus        81 ~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~----~~~~g~~~~l~aal~~  156 (281)
T TIGR03340        81 AQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQ----HRRKAYAWALAAALGT  156 (281)
T ss_pred             HHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccc----cchhHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999988654211    1235888999999999


Q ss_pred             HHHHHHHhhhccCCChHH----HHHHHHHHHHHHHHHHHHhhcCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018398          276 AVGTVMVRWVSKYSDPVM----ATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYS  351 (356)
Q Consensus       276 a~~~v~~r~~~~~~~~~~----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lgi~~s~l~~~l~~~a  351 (356)
                      ++|.+..|+..++.++..    ...+....+++...+.....+...     .......++.+++.+.++++++|.+|+++
T Consensus       157 a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~s~l~~~l~~~a  231 (281)
T TIGR03340       157 AIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRS-----MFPYARQILPSATLGGLMIGGAYALVLWA  231 (281)
T ss_pred             HHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhccc-----hhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999998755544432    222222222122222222112111     11223456677889999999999999999


Q ss_pred             hccCC
Q 018398          352 ATKGK  356 (356)
Q Consensus       352 l~~~g  356 (356)
                      +++.+
T Consensus       232 l~~~~  236 (281)
T TIGR03340       232 MTRLP  236 (281)
T ss_pred             HhhCC
Confidence            99864

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.88  E-value=4.1e-20  Score=171.80  Aligned_cols=231  Identities=17%  Similarity=0.081  Sum_probs=182.5

Q ss_pred             HHHHHHHHHHHHHHHhhhccCCC-HHHHHHHHHHHHHHHHHHHHHHhCCC---CCCChHHHHHHHHHHHHHHHHHHHHHH
Q 018398          121 LVSPFFFWGTAMVAMKEVLPKAG-TFFVAAFRLIPAGLLLITFASSQGRK---LPSGFNAWVSIFLFALVDASCFQGFLA  196 (356)
Q Consensus       121 ll~aa~~~~~~~~~~k~~~~~~~-p~~~~~~r~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~  196 (356)
                      .+++.++-+++.....+..++++ |..+.++.+++-.++..++..+++..   .+..+++|+++++++++. +.++++.+
T Consensus        19 Q~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~D-v~aN~~~v   97 (334)
T PF06027_consen   19 QVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLD-VEANYLVV   97 (334)
T ss_pred             HHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHH-HHHHHHHH
Confidence            36666666666655555555566 88999999998888888777666432   223457889999999999 78899999


Q ss_pred             HHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccCCC----CCCCchhhHHHHHHHHHH
Q 018398          197 QGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFD----ESNSSLWGSGEWWMLLAA  272 (356)
Q Consensus       197 ~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~~~----~~~~~~~~~G~llaLlaa  272 (356)
                      .|++|++.+.++++..+..+++++++++++|+|+++.+++|+++|++|++++...+..    +...++..+||+++++++
T Consensus        98 ~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a  177 (334)
T PF06027_consen   98 LAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGA  177 (334)
T ss_pred             HHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999987622    123456779999999999


Q ss_pred             HHHHHHHHHHhhhccCCChHHHHHHHHHHHHHHHHHHHHhhcCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 018398          273 QSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSA  352 (356)
Q Consensus       273 ~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lgi~~s~l~~~l~~~al  352 (356)
                      ++||+++++.|++.++.+..+.+++..+++.+++.+...+.|......  .+++.+.+..++.-+ ++..+-|.+.-..+
T Consensus       178 ~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~--~~w~~~~~~~~v~~~-~~lf~~y~l~p~~l  254 (334)
T PF06027_consen  178 ILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISGIQLAILERSGIES--IHWTSQVIGLLVGYA-LCLFLFYSLVPIVL  254 (334)
T ss_pred             HHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHheehhhhhc--cCCChhhHHHHHHHH-HHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999988887654422  234445444433333 45556666665555


Q ss_pred             ccC
Q 018398          353 TKG  355 (356)
Q Consensus       353 ~~~  355 (356)
                      +..
T Consensus       255 ~~s  257 (334)
T PF06027_consen  255 RMS  257 (334)
T ss_pred             HhC
Confidence            543

Some of the sequences in this family are annotated as putative membrane proteins.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.87  E-value=1.7e-19  Score=171.21  Aligned_cols=221  Identities=14%  Similarity=0.094  Sum_probs=167.2

Q ss_pred             HHHHHHHhhhccCCC-HHHHHHHHHHHHHHHHHHHHHHhCCCCC-C--ChHHHHHHHHHHHHHHHHHHHHHHHHhhccCh
Q 018398          129 GTAMVAMKEVLPKAG-TFFVAAFRLIPAGLLLITFASSQGRKLP-S--GFNAWVSIFLFALVDASCFQGFLAQGLQRTSA  204 (356)
Q Consensus       129 ~~~~~~~k~~~~~~~-p~~~~~~r~~~~~l~~~~~~~~~~~~~~-~--~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~  204 (356)
                      .......|.+.+.++ |+.++.+|++++.+++..++....++.+ .  .++++..++..|+++.+ .+...+.|++++++
T Consensus        62 ~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~~-~~~~~~~sl~~~sv  140 (350)
T PTZ00343         62 VLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHLF-VHFGAVISMGLGAV  140 (350)
T ss_pred             HHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHhhccH
Confidence            334667899988999 9999999999998876655433222211 1  23577788888998854 46667899999999


Q ss_pred             hHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhh
Q 018398          205 GLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRW  284 (356)
Q Consensus       205 ~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~G~llaLlaa~~~a~~~v~~r~  284 (356)
                      +.++++.+++|+++++++++++|||++++++++++++++|+.+....+     .+....|+++++++++++++++++.|+
T Consensus       141 s~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~-----~~~~~~G~~~~l~s~~~~a~~~i~~k~  215 (350)
T PTZ00343        141 SFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKE-----LHFTWLAFWCAMLSNLGSSLRSIFAKK  215 (350)
T ss_pred             HHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheeccc-----chhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999987533     122356999999999999999999999


Q ss_pred             hccC-------CChHHHHHHHHHHHHHHHHHHHHhhcCCCCCccc----ccCCHHHHHHHHHHHHHHHHHHHHHHHH---
Q 018398          285 VSKY-------SDPVMATGWHMVIGGLPLMVISVLNHDPVYGESV----KELTSSDILALLYTSIFGSAISYGVYFY---  350 (356)
Q Consensus       285 ~~~~-------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~lgi~~s~l~~~l~~~---  350 (356)
                      ..++       .++.+...+..+++.++++|+....+.......+    ...+...+..+++ .++.++++|++|+.   
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~-~i~~s~l~~~l~n~~~f  294 (350)
T PTZ00343        216 TMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIF-KIFFSGVWYYLYNEVAF  294 (350)
T ss_pred             HhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHH-HHHHHHHHHHHHHHHHH
Confidence            7654       4577777777899999999988766532211000    0111112333444 45778999999995   


Q ss_pred             -HhccCC
Q 018398          351 -SATKGK  356 (356)
Q Consensus       351 -al~~~g  356 (356)
                       ++++.+
T Consensus       295 ~~l~~~s  301 (350)
T PTZ00343        295 YCLGKVN  301 (350)
T ss_pred             HHHhccc
Confidence             777653

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.85  E-value=6.7e-19  Score=164.27  Aligned_cols=178  Identities=14%  Similarity=0.091  Sum_probs=151.1

Q ss_pred             HHHHhhhccC-CCHHHHHHHHHHHHHHHHHHHHHH-hCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHH
Q 018398          132 MVAMKEVLPK-AGTFFVAAFRLIPAGLLLITFASS-QGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSV  209 (356)
Q Consensus       132 ~~~~k~~~~~-~~p~~~~~~r~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~  209 (356)
                      .+.+|.+.++ ..|..+++.|+..+.+.+.+.... .+++.+.+++++..++..|++. +.++.+.++++++++++.+++
T Consensus        18 ~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~l~~~s~s~~~l   96 (302)
T TIGR00817        18 NIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVH-TIGHVTSNVSLSKVAVSFTHT   96 (302)
T ss_pred             HHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHhccHHHHHH
Confidence            4578988887 569999999999988776665321 1233344678899999999996 888899999999999999999


Q ss_pred             HHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhhhcc--
Q 018398          210 IIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSK--  287 (356)
Q Consensus       210 i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~G~llaLlaa~~~a~~~v~~r~~~~--  287 (356)
                      +.++.|+++++++++++|||+++++++|++++++|+.+....+     .+....|++++++++++|++|.++.|+..+  
T Consensus        97 i~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~-----~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~  171 (302)
T TIGR00817        97 IKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTE-----LSFNWAGFLSAMISNITFVSRNIFSKKAMTIK  171 (302)
T ss_pred             HHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCc-----ccccHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence            9999999999999999999999999999999999998764322     122346999999999999999999999887  


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHHHhhcC
Q 018398          288 YSDPVMATGWHMVIGGLPLMVISVLNHD  315 (356)
Q Consensus       288 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~  315 (356)
                      +.|+...+.++...+.+.++|..+..++
T Consensus       172 ~~~~~~~~~~~~~~~~~~l~p~~~~~~~  199 (302)
T TIGR00817       172 SLDKTNLYAYISIMSLFLLSPPAFITEG  199 (302)
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHHHHcc
Confidence            7899999999999999999999887654

specificities overlap.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.83  E-value=9.5e-18  Score=154.66  Aligned_cols=232  Identities=28%  Similarity=0.365  Sum_probs=178.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccC-CCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHHHH
Q 018398          115 LLEWAVLVSPFFFWGTAMVAMKEVLPK-AGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQG  193 (356)
Q Consensus       115 ~~g~l~ll~aa~~~~~~~~~~k~~~~~-~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  193 (356)
                      ..+....++..+.|+......|...++ .++....+.|...+.+...+.....+.......+.+++..+.+.++...++.
T Consensus         6 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (292)
T COG0697           6 LLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFL   85 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHH
Confidence            456777888889999999999988887 6777777889998888854444333211122223355667777777789999


Q ss_pred             HHHHHhhccChhHHHHHHhhHHHHHHHHHH-HHhCCCCcHHHHHHHHHHHHHHHHhhccCCCCCCCchhhHHHHHHHHHH
Q 018398          194 FLAQGLQRTSAGLGSVIIDSQPLSVAVLAA-LLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAA  272 (356)
Q Consensus       194 ~~~~al~~~~~~~a~~i~~l~pv~~~il~~-~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~G~llaLlaa  272 (356)
                      +++.++++++++.++++.++.|+++.++++ +++|||+++.++++++++++|++++..++......  ...|++++++++
T Consensus        86 ~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~--~~~g~~~~l~a~  163 (292)
T COG0697          86 LLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGIL--SLLGLLLALAAA  163 (292)
T ss_pred             HHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhH--HHHHHHHHHHHH
Confidence            999999999999999999999999999997 77799999999999999999999999977332211  457999999999


Q ss_pred             HHHHHHHHHHhhhccCCChHHHHH-HHHHHHHHHHHHHHHhhcCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018398          273 QSMAVGTVMVRWVSKYSDPVMATG-WHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYS  351 (356)
Q Consensus       273 ~~~a~~~v~~r~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lgi~~s~l~~~l~~~a  351 (356)
                      ++++++.+..|+.. +.++..... +..........+...  ....     .+.+...|..+.+++++++++++.+|+++
T Consensus       164 ~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~~~g~~~~~i~~~~~~~~  235 (292)
T COG0697         164 LLWALYTALVKRLS-RLGPVTLALLLQLLLALLLLLLFFL--SGFG-----APILSRAWLLLLYLGVFSTGLAYLLWYYA  235 (292)
T ss_pred             HHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHHh--cccc-----ccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999987 666666665 444422222222221  1111     23567789999999999999999999999


Q ss_pred             hccCC
Q 018398          352 ATKGK  356 (356)
Q Consensus       352 l~~~g  356 (356)
                      +++.+
T Consensus       236 ~~~~~  240 (292)
T COG0697         236 LRLLG  240 (292)
T ss_pred             HHhcC
Confidence            99864

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.81  E-value=1.9e-21  Score=169.28  Aligned_cols=231  Identities=16%  Similarity=0.123  Sum_probs=182.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 018398          115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGF  194 (356)
Q Consensus       115 ~~g~l~ll~aa~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  194 (356)
                      .+|.+++.++ .++....++.+... +.+|.++.-.|++.-.++..|...+++.+.-.+...+.++++.|+.+ +.+...
T Consensus        37 ~~gl~l~~vs-~ff~~~~vv~t~~~-e~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R~~LiLRg~mG-~tgvml  113 (346)
T KOG4510|consen   37 NLGLLLLTVS-YFFNSCMVVSTKVL-ENDPMELASFRLLVRMLITYPCLIYYMQPVIGPEGKRKWLILRGFMG-FTGVML  113 (346)
T ss_pred             ccCceehhhH-HHHhhHHHhhhhhh-ccChhHhhhhhhhhehhhhheEEEEEeeeeecCCCcEEEEEeehhhh-hhHHHH
Confidence            4566677777 55555555555544 47899999999888888877777776654422223444567788888 556688


Q ss_pred             HHHHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccCC---C---C---CCCchhhHHH
Q 018398          195 LAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAF---D---E---SNSSLWGSGE  265 (356)
Q Consensus       195 ~~~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~~---~---~---~~~~~~~~G~  265 (356)
                      .|+|++|++.++|.+|.+.+|+++.+++|+++|||.++.+.+|..+.+.||+++.+|.+   +   +   +..+...+|.
T Consensus       114 myya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt  193 (346)
T KOG4510|consen  114 MYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGT  193 (346)
T ss_pred             HHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCch
Confidence            89999999999999999999999999999999999999999999999999999999972   1   1   1113345789


Q ss_pred             HHHHHHHHHHHHHHHHHhhhccCCChHHHHHHHHHHHHHHHHHHHHhhcCCCCCcccccCCHHHHHHHHHHHHHHHHHHH
Q 018398          266 WWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISY  345 (356)
Q Consensus       266 llaLlaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lgi~~s~l~~  345 (356)
                      +.++.++++.+..+++.|++.++.|....+.|+.+++.+..++.....+...     .+..+++|+..+.+| +.+.+++
T Consensus       194 ~aai~s~lf~asvyIilR~iGk~~h~~msvsyf~~i~lV~s~I~~~~ig~~~-----lP~cgkdr~l~~~lG-vfgfigQ  267 (346)
T KOG4510|consen  194 VAAISSVLFGASVYIILRYIGKNAHAIMSVSYFSLITLVVSLIGCASIGAVQ-----LPHCGKDRWLFVNLG-VFGFIGQ  267 (346)
T ss_pred             HHHHHhHhhhhhHHHHHHHhhccccEEEEehHHHHHHHHHHHHHHhhcccee-----cCccccceEEEEEeh-hhhhHHH
Confidence            9999999999999999999999999999999999999998888877665443     344567888888888 4556777


Q ss_pred             HHHHHHhcc
Q 018398          346 GVYFYSATK  354 (356)
Q Consensus       346 ~l~~~al~~  354 (356)
                      .+...++++
T Consensus       268 IllTm~lQi  276 (346)
T KOG4510|consen  268 ILLTMGLQI  276 (346)
T ss_pred             HHHHHHhhh
Confidence            777777653

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.74  E-value=2.3e-15  Score=134.07  Aligned_cols=225  Identities=14%  Similarity=0.068  Sum_probs=181.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHhCCCC-----CCChHHHHHHHHHHHHHHH
Q 018398          115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKL-----PSGFNAWVSIFLFALVDAS  189 (356)
Q Consensus       115 ~~g~l~ll~aa~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~~~~~  189 (356)
                      .+|+++.+.+-++||......|.+ +++++.++...|.+.+..+++......+++.     .++++.+....+.+.+. .
T Consensus         6 ~~Gil~~l~Ay~lwG~lp~y~kll-~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li-~   83 (293)
T COG2962           6 RKGILLALLAYLLWGLLPLYFKLL-EPLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLI-G   83 (293)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHH-ccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHH-H
Confidence            568999999999999999999975 6699999999999999888877766554322     22335555555555554 8


Q ss_pred             HHHHHHHHHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccCCCCCCCchhhHHHHHHH
Q 018398          190 CFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWML  269 (356)
Q Consensus       190 ~~~~~~~~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~G~llaL  269 (356)
                      ..+..|.+|.++..+.++++=.++.|++.++++.+|+|||+++.|+++++++.+||.......     ++..    ..++
T Consensus        84 ~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~-----g~lp----wval  154 (293)
T COG2962          84 LNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL-----GSLP----WVAL  154 (293)
T ss_pred             HHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc-----CCCc----HHHH
Confidence            899999999999999999999999999999999999999999999999999999999988744     1111    3567


Q ss_pred             HHHHHHHHHHHHHhhhccCCChHHHHHHHHHHHHHHHHHHHHhhcCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHH
Q 018398          270 LAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYF  349 (356)
Q Consensus       270 laa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lgi~~s~l~~~l~~  349 (356)
                      .=+++|+.|...-|+.  +.|+.+-.+..++.-.+..+...+..++...  .....+...|..++..| ..|+++..+|.
T Consensus       155 ~la~sf~~Ygl~RK~~--~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~--~~~~~~~~~~~LLv~aG-~vTavpL~lf~  229 (293)
T COG2962         155 ALALSFGLYGLLRKKL--KVDALTGLTLETLLLLPVALIYLLFLADSGQ--FLQQNANSLWLLLVLAG-LVTAVPLLLFA  229 (293)
T ss_pred             HHHHHHHHHHHHHHhc--CCchHHhHHHHHHHHhHHHHHHHHHHhcCch--hhhcCCchHHHHHHHhh-HHHHHHHHHHH
Confidence            7789999999998886  6789999999999888888888887765542  11223455677777677 78999999999


Q ss_pred             HHhccC
Q 018398          350 YSATKG  355 (356)
Q Consensus       350 ~al~~~  355 (356)
                      .|.|+.
T Consensus       230 ~aa~~l  235 (293)
T COG2962         230 AAAKRL  235 (293)
T ss_pred             HHHhcC
Confidence            998875

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.71  E-value=4.6e-15  Score=128.80  Aligned_cols=223  Identities=18%  Similarity=0.191  Sum_probs=183.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHHHHHHH
Q 018398          117 EWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLA  196 (356)
Q Consensus       117 g~l~ll~aa~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  196 (356)
                      .++.++.+.+.--....+.|.+.+.+++..++.+|..++.+++++++...++  +..++++..+..+|... +..+++||
T Consensus        13 p~~~ll~amvsiq~Gas~Ak~LFP~vG~~g~t~lRl~~aaLIll~l~RPwr~--r~~~~~~~~~~~yGvsL-g~MNl~FY   89 (292)
T COG5006          13 PILALLVAMVSIQSGASFAKSLFPLVGAAGVTALRLAIAALILLALFRPWRR--RLSKPQRLALLAYGVSL-GGMNLLFY   89 (292)
T ss_pred             cHHHHHHHHHHHHhhHHHHHHHccccChhhHHHHHHHHHHHHHHHHhhHHHh--ccChhhhHHHHHHHHHH-HHHHHHHH
Confidence            4666677766666677788999999999999999999999999988755443  34567888889999887 66789999


Q ss_pred             HHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccCCCCCCCchhhHHHHHHHHHHHHHH
Q 018398          197 QGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMA  276 (356)
Q Consensus       197 ~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~G~llaLlaa~~~a  276 (356)
                      .+++..|.+.+..+-|+-|+.+.++..    +  +.++.+-+.+++.|+.++.-.+.+.+.  ....|..+++.++.||+
T Consensus        90 ~si~riPlGiAVAiEF~GPL~vA~~~s----R--r~~d~vwvaLAvlGi~lL~p~~~~~~~--lDp~Gv~~Al~AG~~Wa  161 (292)
T COG5006          90 LSIERIPLGIAVAIEFTGPLAVALLSS----R--RLRDFVWVALAVLGIWLLLPLGQSVWS--LDPVGVALALGAGACWA  161 (292)
T ss_pred             HHHHhccchhhhhhhhccHHHHHHHhc----c--chhhHHHHHHHHHHHHhheeccCCcCc--CCHHHHHHHHHHhHHHH
Confidence            999999999999999999999887762    2  445666677788998888765533332  33469999999999999


Q ss_pred             HHHHHHhhhccCCChHHHHHHHHHHHHHHHHHHHHhhcCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 018398          277 VGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGK  356 (356)
Q Consensus       277 ~~~v~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lgi~~s~l~~~l~~~al~~~g  356 (356)
                      +|.+..+|..+..|...-+..-+.+++++.+|+.....++.      -.++.....-+..+++++++.|.+-+.+++|.+
T Consensus       162 ~YIv~G~r~g~~~~g~~g~a~gm~vAaviv~Pig~~~ag~~------l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp  235 (292)
T COG5006         162 LYIVLGQRAGRAEHGTAGVAVGMLVAALIVLPIGAAQAGPA------LFSPSLLPLALGVAVLSSALPYSLEMIALRRLP  235 (292)
T ss_pred             HHHHHcchhcccCCCchHHHHHHHHHHHHHhhhhhhhcchh------hcChHHHHHHHHHHHHhcccchHHHHHHHhhCC
Confidence            99999999988888889999999999999999998765553      356677778888999999999999999999863

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.70  E-value=1.4e-16  Score=124.00  Aligned_cols=133  Identities=20%  Similarity=0.224  Sum_probs=121.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCC---ChHHHHHHHHHHHHHHHHHHH
Q 018398          117 EWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPS---GFNAWVSIFLFALVDASCFQG  193 (356)
Q Consensus       117 g~l~ll~aa~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~  193 (356)
                      ..++.++++++++...++.|...+++||...+++|..+..+++..+++..++....   ..|.|..+++-|+.+ +.++.
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~-glswl   82 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAG-GLSWL   82 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHH-HHHHH
Confidence            46788999999999999999999999999999999999999999999888765433   567888888878665 99999


Q ss_pred             HHHHHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhc
Q 018398          194 FLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEA  250 (356)
Q Consensus       194 ~~~~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~  250 (356)
                      +||+|++...++....+-.++|+++++++++++|||++..+|+|++++.+|++++..
T Consensus        83 ~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          83 LYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            999999999999999999999999999999999999999999999999999988754

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.69  E-value=1.2e-14  Score=134.57  Aligned_cols=221  Identities=15%  Similarity=0.115  Sum_probs=159.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHHHHHHH
Q 018398          117 EWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLA  196 (356)
Q Consensus       117 g~l~ll~aa~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  196 (356)
                      ++++.++++++||+..+..|... +.++.++.  |..++.+++..+....+.+....++.+..-++.|.+ ...++.+++
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~-g~~~~~~~--~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~l~G~~-w~ig~~~~~   77 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG-GGPYSQTL--GTTFGALILSIAIAIFVLPEFWALSIFLVGLLSGAF-WALGQINQF   77 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC-CCHHHHHH--HHHHHHHHHHHHHHHHhCCcccccHHHHHHHHHHHH-HHhhhhhHH
Confidence            47888999999999999999876 67777665  777777777665554433222122333333333443 588889999


Q ss_pred             HHhhccChhHHHHHHh-hHHHHHHHHHHHHhCCCCcHHH----HHHHHHHHHHHHHhhccCCCCCC-C--chhhHHHHHH
Q 018398          197 QGLQRTSAGLGSVIID-SQPLSVAVLAALLFGESIGLVG----AGGLVLGVIGLLLLEAPAFDESN-S--SLWGSGEWWM  268 (356)
Q Consensus       197 ~al~~~~~~~a~~i~~-l~pv~~~il~~~~l~e~~~~~~----~~g~~l~~~Gv~ll~~~~~~~~~-~--~~~~~G~lla  268 (356)
                      .++++++.+.+..+.. +.++++.+++.+++||+.++++    ++|++++++|++++...+.+... .  .+..+|.+++
T Consensus        78 ~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~~~  157 (290)
T TIGR00776        78 KSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGILLL  157 (290)
T ss_pred             HHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHHHH
Confidence            9999999999998877 9999999999999999999999    99999999999998775422111 1  2335799999


Q ss_pred             HHHHHHHHHHHHHHhhhccCCChHHHHHHHHH---HHHHHHHHHHHhhcCCCCCcccccCCHHHHHHHHHHHHHHHHHHH
Q 018398          269 LLAAQSMAVGTVMVRWVSKYSDPVMATGWHMV---IGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISY  345 (356)
Q Consensus       269 Llaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lgi~~s~l~~  345 (356)
                      ++++++|+.|.+..|+.  ++++...++.+..   +++++..+...  ..       .+...+.++..+..|++ ..+++
T Consensus       158 l~sg~~y~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~-------~~~~~~~~~~~~~~Gi~-~~ia~  225 (290)
T TIGR00776       158 LMSTIGYLVYVVVAKAF--GVDGLSVLLPQAIGMVIGGIIFNLGHI--LA-------KPLKKYAILLNILPGLM-WGIGN  225 (290)
T ss_pred             HHHHHHHHHHHHHHHHc--CCCcceehhHHHHHHHHHHHHHHHHHh--cc-------cchHHHHHHHHHHHHHH-HHHHH
Confidence            99999999999999987  4788888554444   33332222211  00       11233344444448877 79999


Q ss_pred             HHHHHHhc
Q 018398          346 GVYFYSAT  353 (356)
Q Consensus       346 ~l~~~al~  353 (356)
                      .+|..+.+
T Consensus       226 ~~y~~~~~  233 (290)
T TIGR00776       226 FFYLFSAQ  233 (290)
T ss_pred             HHHHHHcc
Confidence            99999887

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.62  E-value=1e-14  Score=133.37  Aligned_cols=242  Identities=15%  Similarity=0.090  Sum_probs=180.5

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHhhhccCCC---HHHHHHHHHHHHHHHHHHHHH------H---h---------C-
Q 018398          110 MELGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAG---TFFVAAFRLIPAGLLLITFAS------S---Q---------G-  167 (356)
Q Consensus       110 ~~~~~~~g~l~ll~aa~~~~~~~~~~k~~~~~~~---p~~~~~~r~~~~~l~~~~~~~------~---~---------~-  167 (356)
                      +..+...|++++++..++|-.+.-+++.+.++-.   |+.++++....-.+.+.++.+      .   +         . 
T Consensus         8 ~~~r~~lGl~lL~~V~viWV~SSeLT~~if~~~~f~kPFfiTY~~ts~fivYL~~~~~~d~~~~~~~~R~~~~~~~~~~e   87 (416)
T KOG2765|consen    8 KRWRWTLGLVLLLLVVVIWVASSELTQSIFEDYNFRKPFFITYLKTSLFIVYLPPFILIDAPWRILETRSKRSNHAIMEE   87 (416)
T ss_pred             hhhHHHHHHHHHHHHHHHHHhHHHHHHHHHhhcccCCceeEeeecccceehhhhhhhhhcchhhhhhhhccccchhhhhh
Confidence            3344578999999999999999999998887643   888887776655555554331      0   0         0 


Q ss_pred             ----------------------------------C---------------CCCCChH------------HHHHHHHHHHH
Q 018398          168 ----------------------------------R---------------KLPSGFN------------AWVSIFLFALV  186 (356)
Q Consensus       168 ----------------------------------~---------------~~~~~~~------------~~~~~~~~g~~  186 (356)
                                                        .               +.+...+            +..++.+.=+.
T Consensus        88 ~d~e~y~~~~~~~~~~~~~l~~~~~~~~~~~~l~s~~~~~~~s~~~e~~~~~~~~~rs~l~~~~~~t~~~~ak~sl~fc~  167 (416)
T KOG2765|consen   88 ADAEGYFSACTTDKTMESGLSGPESVPDKSPLLGSGEEEKPESTNLEVREKANTKKRSNLKERGKLTATQTAKLSLFFCP  167 (416)
T ss_pred             hhhhccccccccccccccccCCceeeeccccccccccccCCCCccccccccCCcccccchhhhhhhHHHHHHHHHHHHHH
Confidence                                              0               0000111            33344333333


Q ss_pred             HHHHHHHHHHHHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccCC---CCCCCchhhH
Q 018398          187 DASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAF---DESNSSLWGS  263 (356)
Q Consensus       187 ~~~~~~~~~~~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~~---~~~~~~~~~~  263 (356)
                      -.+.+++++..|+.+++++..+++..++-+|+..++.++.+||+++.+.++++++++||+++...+.   ++.+.+....
T Consensus       168 lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~~~ll  247 (416)
T KOG2765|consen  168 LWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPASRPLL  247 (416)
T ss_pred             HHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCCccchhH
Confidence            3478889999999999999999999999999999999999999999999999999999999998763   1223344568


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhccC----CChHHHHHHHHHHHHHHHHHHHHhhcCCCCCcccccCCHHHHHHHHHHHHH
Q 018398          264 GEWWMLLAAQSMAVGTVMVRWVSKY----SDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIF  339 (356)
Q Consensus       264 G~llaLlaa~~~a~~~v~~r~~~~~----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lgi~  339 (356)
                      |++++|++|+.||+|.++.||...+    .|.....++..++..+++.|..++.+.... +.+..++......++..+++
T Consensus       248 G~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~-e~F~lP~~~q~~~vv~~~li  326 (416)
T KOG2765|consen  248 GNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGE-ERFELPSSTQFSLVVFNNLI  326 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhcc-CcccCCCCceeEeeeHhhHH
Confidence            9999999999999999999986543    467777777888888888877776543321 12233445566778888999


Q ss_pred             HHHHHHHHHHHHh
Q 018398          340 GSAISYGVYFYSA  352 (356)
Q Consensus       340 ~s~l~~~l~~~al  352 (356)
                      +++++-++|.+|+
T Consensus       327 gtvvSDylW~~a~  339 (416)
T KOG2765|consen  327 GTVVSDYLWAKAV  339 (416)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999999986

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.59  E-value=2.1e-16  Score=137.10  Aligned_cols=189  Identities=16%  Similarity=0.168  Sum_probs=165.7

Q ss_pred             HHHHHHHHHHHHHHHhhhccCCC-HHHHHHHHHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHh
Q 018398          121 LVSPFFFWGTAMVAMKEVLPKAG-TFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGL  199 (356)
Q Consensus       121 ll~aa~~~~~~~~~~k~~~~~~~-p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al  199 (356)
                      .+++.++-+.++...-++..+++ |..++++.+.+-+++..+++.+|++..   ...|..+++++++. +.++++...|+
T Consensus        24 QiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~~~---~~~~~hYilla~~D-VEaNy~vV~Ay   99 (336)
T KOG2766|consen   24 QILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRRKYI---KAKWRHYILLAFVD-VEANYFVVKAY   99 (336)
T ss_pred             HHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhhHHH---HHHHHHhhheeEEe-ecccEEEeeeh
Confidence            47777787877777666666565 999999999999999999998887433   35566689999999 78888999999


Q ss_pred             hccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccC---CCCCCCchhhHHHHHHHHHHHHHH
Q 018398          200 QRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA---FDESNSSLWGSGEWWMLLAAQSMA  276 (356)
Q Consensus       200 ~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~---~~~~~~~~~~~G~llaLlaa~~~a  276 (356)
                      +|++...+.++-.+....+.+++|++++.|..+.++.|+++|++|++++...+   ++...+++..+||.+.+++|.+||
T Consensus       100 QyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYa  179 (336)
T KOG2766|consen  100 QYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYA  179 (336)
T ss_pred             hhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeee
Confidence            99999999999999999999999999999999999999999999999999887   233445677899999999999999


Q ss_pred             HHHHHHhhhccCCChHHHHHHHHHHHHHHHHHHHHhhc
Q 018398          277 VGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNH  314 (356)
Q Consensus       277 ~~~v~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  314 (356)
                      +.++..+.+.++.|-.+.+....++|+++..+- ++.+
T Consensus       180 VSNv~EEflvkn~d~~elm~~lgLfGaIIsaIQ-~i~~  216 (336)
T KOG2766|consen  180 VSNVSEEFLVKNADRVELMGFLGLFGAIISAIQ-FIFE  216 (336)
T ss_pred             eccccHHHHHhcCcHHHHHHHHHHHHHHHHHHH-Hhhh
Confidence            999999999999999999999999999999998 4444

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.57  E-value=2.3e-14  Score=115.25  Aligned_cols=123  Identities=24%  Similarity=0.383  Sum_probs=108.9

Q ss_pred             HHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHhCCC--CCCChHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 018398          126 FFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRK--LPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTS  203 (356)
Q Consensus       126 ~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~  203 (356)
                      ++||...+..|...++.+|....++|+..+.+ ++++....+++  ...+.+++...+..+.++...++.++++++++++
T Consensus         1 ~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~   79 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYIS   79 (126)
T ss_pred             ceeeeHHHHHHHHhccCCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcc
Confidence            47899999999999999999999999999997 55555544432  3456678888888898877999999999999999


Q ss_pred             hhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhh
Q 018398          204 AGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLE  249 (356)
Q Consensus       204 ~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~  249 (356)
                      ++.++.+..++|+++++++++++||++++.+++|++++++|++++.
T Consensus        80 ~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   80 ASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999998875

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.46  E-value=3.6e-12  Score=116.06  Aligned_cols=131  Identities=19%  Similarity=0.262  Sum_probs=115.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccCCCH--HHHHHHHHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHHH
Q 018398          115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAGT--FFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQ  192 (356)
Q Consensus       115 ~~g~l~ll~aa~~~~~~~~~~k~~~~~~~p--~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  192 (356)
                      ..|.++.++++++|+...+..|...++.++  .....+++.++.++++++....++......+++...+..++++..+++
T Consensus       127 ~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (260)
T TIGR00950       127 PAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQALSLQWGALLYLGLIGTALAY  206 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHH
Confidence            578999999999999999999998877774  455557899999999888776654444455677778888999889999


Q ss_pred             HHHHHHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHH
Q 018398          193 GFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGL  245 (356)
Q Consensus       193 ~~~~~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv  245 (356)
                      .++++++++.+++.++.+.+++|+++++++++++||++++.+++|+++.+.|+
T Consensus       207 ~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       207 FLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999999999986

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.44  E-value=8.1e-11  Score=109.85  Aligned_cols=211  Identities=17%  Similarity=0.071  Sum_probs=159.9

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHhhHHHHHHHHH
Q 018398          143 GTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLA  222 (356)
Q Consensus       143 ~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~l~pv~~~il~  222 (356)
                      .|..+++.++....+...+.....+. .+.++..+..++..+++. .++..+.+.|++|++...-.++....|+.+++++
T Consensus        31 ~~~~lt~~q~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~  108 (303)
T PF08449_consen   31 FPLFLTFVQFAFNALFSFILLSLFKF-PKSRKIPLKKYAILSFLF-FLASVLSNAALKYISYPTQIVFKSSKPIPVMILG  108 (303)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhccc-cCCCcChHHHHHHHHHHH-HHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHH
Confidence            48999999999988888777666552 222345566777777777 7777899999999999999999999999999999


Q ss_pred             HHHhCCCCcHHHHHHHHHHHHHHHHhhccCCCCCCC-----chhhHHHHHHHHHHHHHHHHHHHHhhhcc--CCChHHHH
Q 018398          223 ALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNS-----SLWGSGEWWMLLAAQSMAVGTVMVRWVSK--YSDPVMAT  295 (356)
Q Consensus       223 ~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~-----~~~~~G~llaLlaa~~~a~~~v~~r~~~~--~~~~~~~~  295 (356)
                      .+++|+|+++.+++++++..+|+++....+......     .....|+++.+++.++.++..++.++..+  +.++.+.+
T Consensus       109 ~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~m  188 (303)
T PF08449_consen  109 VLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELM  188 (303)
T ss_pred             HHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHH
Confidence            999999999999999999999999999876322111     11234999999999999999999998765  45788999


Q ss_pred             HHHHHHHHHHHHHHHHh--hcCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 018398          296 GWHMVIGGLPLMVISVL--NHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGK  356 (356)
Q Consensus       296 ~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~lgi~~s~l~~~l~~~al~~~g  356 (356)
                      ++..+++.+..++..+.  .++...........+..+..++... ++..++....++.+++.|
T Consensus       189 fy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s-~~~~~g~~~i~~~~~~~~  250 (303)
T PF08449_consen  189 FYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFS-LTGALGQFFIFYLIKKFS  250 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHHHhcC
Confidence            99999999998888887  3332211111122334455555555 666777777777666643

; GO: 0055085 transmembrane transport

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.39  E-value=2.9e-11  Score=112.36  Aligned_cols=137  Identities=14%  Similarity=0.104  Sum_probs=115.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 018398          115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGF  194 (356)
Q Consensus       115 ~~g~l~ll~aa~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  194 (356)
                      ..|.++.++++++|+...+..|...++.++..... ...++.+++.++..............+...+.+|+++..++|.+
T Consensus       147 ~~G~ll~l~aa~~~a~~~v~~r~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~lgv~~t~~~~~l  225 (293)
T PRK10532        147 LTGAALALGAGACWAIYILSGQRAGAEHGPATVAI-GSLIAALIFVPIGALQAGEALWHWSILPLGLAVAILSTALPYSL  225 (293)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHH-HHHHHHHHHHHHHHHccCcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence            46899999999999999999999877788877654 44566666777666544322234455555678899999999999


Q ss_pred             HHHHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccC
Q 018398          195 LAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA  252 (356)
Q Consensus       195 ~~~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~  252 (356)
                      +++++++.++++++++.+++|++.++++++++||+++..+++|.+++++|+.......
T Consensus       226 ~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~  283 (293)
T PRK10532        226 EMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTI  283 (293)
T ss_pred             HHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence            9999999999999999999999999999999999999999999999999999887654

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.31  E-value=2.9e-11  Score=96.02  Aligned_cols=104  Identities=22%  Similarity=0.294  Sum_probs=87.9

Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCC----CChHHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHhhHHHHHHHHHHH
Q 018398          149 AFRLIPAGLLLITFASSQGRKLP----SGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAAL  224 (356)
Q Consensus       149 ~~r~~~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~l~pv~~~il~~~  224 (356)
                      .+|+..+.+++..+...+++..+    .+.+.+.+.+..|.++...++.++++|+++.+ +.++.+.++.|+++.+++++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            58999999999888877654211    12355566677788886688999999999999 58889999999999999999


Q ss_pred             HhCCCCcHHHHHHHHHHHHHHHHhhccCC
Q 018398          225 LFGESIGLVGAGGLVLGVIGLLLLEAPAF  253 (356)
Q Consensus       225 ~l~e~~~~~~~~g~~l~~~Gv~ll~~~~~  253 (356)
                      ++|||++++++++++++++|++++..++.
T Consensus        81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~  109 (113)
T PF13536_consen   81 FFKERLSPRRWLAILLILIGVILIAWSDL  109 (113)
T ss_pred             HhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence            99999999999999999999999998773

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.31  E-value=1.2e-10  Score=108.13  Aligned_cols=137  Identities=14%  Similarity=0.144  Sum_probs=116.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHhCCCC--CCChHHHHHHHHHHHHHHHHHH
Q 018398          115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKL--PSGFNAWVSIFLFALVDASCFQ  192 (356)
Q Consensus       115 ~~g~l~ll~aa~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~  192 (356)
                      ..|.++.++++++|+...+..|...+. ++...+.+++.++.+.+.++....+...  ....+.+..++..++++..+++
T Consensus       149 ~~G~l~~l~a~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~  227 (292)
T PRK11272        149 PWGAILILIASASWAFGSVWSSRLPLP-VGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAI  227 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCCC-cchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHH
Confidence            468999999999999999999986543 4556778888888888887766544322  1245678888889999889999


Q ss_pred             HHHHHHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccC
Q 018398          193 GFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA  252 (356)
Q Consensus       193 ~~~~~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~  252 (356)
                      .++++++++.++++++++.+++|+++++++++++||++++.+++|+++++.|++++...+
T Consensus       228 ~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~  287 (292)
T PRK11272        228 SAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGK  287 (292)
T ss_pred             HHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999887643

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.26  E-value=2.6e-10  Score=106.10  Aligned_cols=134  Identities=16%  Similarity=0.111  Sum_probs=105.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHhCC-CCCCChHHHHHHHHHHHHHHHHHHH
Q 018398          115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGR-KLPSGFNAWVSIFLFALVDASCFQG  193 (356)
Q Consensus       115 ~~g~l~ll~aa~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~  193 (356)
                      ..|.++.++++++|+...+..|...++.++.....   ..+.+.+.+.....+. ........+..++..++ ..+++|.
T Consensus       155 ~~G~~~~l~aa~~~A~~~v~~k~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~-~t~~~~~  230 (295)
T PRK11689        155 PLSYGLAFIGAFIWAAYCNVTRKYARGKNGITLFF---ILTALALWIKYFLSPQPAMVFSLPAIIKLLLAAA-AMGFGYA  230 (295)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccCCCCchhHHH---HHHHHHHHHHHHHhcCccccCCHHHHHHHHHHHH-HHHHHHH
Confidence            45889999999999999999999877777765432   2233333332223322 12334466766666664 5688999


Q ss_pred             HHHHHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccC
Q 018398          194 FLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA  252 (356)
Q Consensus       194 ~~~~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~  252 (356)
                      ++++++++.+++.++.+.+++|++.+++++++++|+++..+++|++++++|+.+....+
T Consensus       231 l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~  289 (295)
T PRK11689        231 AWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLAT  289 (295)
T ss_pred             HHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhH
Confidence            99999999999999999999999999999999999999999999999999998887644

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.22  E-value=2.5e-09  Score=96.34  Aligned_cols=172  Identities=16%  Similarity=0.064  Sum_probs=132.1

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccC
Q 018398          173 GFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA  252 (356)
Q Consensus       173 ~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~  252 (356)
                      .+++.+++.+.+++. .+.+.+.++++++++++.-.++..+-.+++++++++++|+|++++||+++++.++|+.++..++
T Consensus        13 ~~~~~~~~~vPA~lY-~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~   91 (244)
T PF04142_consen   13 SPKDTLKLAVPALLY-AIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSS   91 (244)
T ss_pred             hHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCC
Confidence            457778888888876 8888999999999999999999999999999999999999999999999999999999988766


Q ss_pred             CCC------CC------CchhhHHHHHHHHHHHHHHHHHHHHhhhccCC--ChHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 018398          253 FDE------SN------SSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYS--DPVMATGWHMVIGGLPLMVISVLNHDPVY  318 (356)
Q Consensus       253 ~~~------~~------~~~~~~G~llaLlaa~~~a~~~v~~r~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  318 (356)
                      ...      ..      ......|.++.++++++-++..++.+|+.|+.  +.+.......+.+.++.++.....+....
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~  171 (244)
T PF04142_consen   92 SQSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAI  171 (244)
T ss_pred             ccccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence            221      11      12356899999999999999999999987654  66667777778888888777665443221


Q ss_pred             C--cccccCCHHHHHHHHHHHHHHHHHHH
Q 018398          319 G--ESVKELTSSDILALLYTSIFGSAISY  345 (356)
Q Consensus       319 ~--~~~~~~~~~~~~~~~~lgi~~s~l~~  345 (356)
                      .  ..+...+...|..++..++.+-.+++
T Consensus       172 ~~~g~f~G~~~~~~~~i~~~a~gGllva~  200 (244)
T PF04142_consen  172 SESGFFHGYSWWVWIVIFLQAIGGLLVAF  200 (244)
T ss_pred             ccCCchhhcchHHHHHHHHHHHhhHHHHH
Confidence            1  11234455566666555544444443

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.20  E-value=1.4e-09  Score=101.37  Aligned_cols=138  Identities=15%  Similarity=0.146  Sum_probs=109.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccCCC---HHHHHHHHHHHHHHHHHHHHHHhCCC-------CCCChHHHHHHHHHH
Q 018398          115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAG---TFFVAAFRLIPAGLLLITFASSQGRK-------LPSGFNAWVSIFLFA  184 (356)
Q Consensus       115 ~~g~l~ll~aa~~~~~~~~~~k~~~~~~~---p~~~~~~r~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~g  184 (356)
                      ..|.++.++++++|+...+..|...++.+   ......+...++.+.+.......+..       .......+..++..+
T Consensus       142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  221 (299)
T PRK11453        142 MLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLA  221 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHH
Confidence            46899999999999999999998654333   23334444444444333332222211       123457788889999


Q ss_pred             HHHHHHHHHHHHHHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccC
Q 018398          185 LVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA  252 (356)
Q Consensus       185 ~~~~~~~~~~~~~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~  252 (356)
                      +++..++|.++++++++.++.+++.+..++|++..+++++++||+++..+++|.+++++|+++...+.
T Consensus       222 i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~  289 (299)
T PRK11453        222 FVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL  289 (299)
T ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence            99999999999999999999999999999999999999999999999999999999999999887654

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.20  E-value=7.6e-10  Score=105.21  Aligned_cols=136  Identities=13%  Similarity=0.133  Sum_probs=105.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccCCCH-HHHHHHHHHHHHHHHHHHHHHhCC-CC-----CCChHHHHHHHHHHHHH
Q 018398          115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAGT-FFVAAFRLIPAGLLLITFASSQGR-KL-----PSGFNAWVSIFLFALVD  187 (356)
Q Consensus       115 ~~g~l~ll~aa~~~~~~~~~~k~~~~~~~p-~~~~~~r~~~~~l~~~~~~~~~~~-~~-----~~~~~~~~~~~~~g~~~  187 (356)
                      ..|.+++++++++|++..++.|....+.++ ...+++....+.+.+.+......+ ..     ..... ....+..+++ 
T Consensus       188 ~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~i~y~~i~-  265 (358)
T PLN00411        188 LIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDIT-LITIVTMAII-  265 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchH-HHHHHHHHHH-
Confidence            458899999999999999999987776654 456667777666666555444322 11     11111 2234444544 


Q ss_pred             HHHHHHHHHHHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccC
Q 018398          188 ASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA  252 (356)
Q Consensus       188 ~~~~~~~~~~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~  252 (356)
                      ..++|.++++++++.+++.++++.+++|++++++++++++|++++.+++|.+++++|+++...+.
T Consensus       266 t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~  330 (358)
T PLN00411        266 TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGK  330 (358)
T ss_pred             HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhh
Confidence            46788999999999999999999999999999999999999999999999999999999988654

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.11  E-value=7.5e-10  Score=102.25  Aligned_cols=134  Identities=10%  Similarity=0.037  Sum_probs=98.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccCCCHH----HHHHHHHHHHHHHHHHHHHHhCCC-CCCChHHHHHHHHHHHHHHH
Q 018398          115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAGTF----FVAAFRLIPAGLLLITFASSQGRK-LPSGFNAWVSIFLFALVDAS  189 (356)
Q Consensus       115 ~~g~l~ll~aa~~~~~~~~~~k~~~~~~~p~----~~~~~r~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~  189 (356)
                      ..+.++.++++++|+...+..|...++.++.    ....+.+.+..+.+.++...++.. .......+......+.+...
T Consensus       143 ~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  222 (281)
T TIGR03340       143 RKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSMFPYARQILPSATLGGLMIG  222 (281)
T ss_pred             hhHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHH
Confidence            3467788999999999999998765444432    233334433322222222222221 11222344555667777778


Q ss_pred             HHHHHHHHHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHh
Q 018398          190 CFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLL  248 (356)
Q Consensus       190 ~~~~~~~~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll  248 (356)
                      .+|.++++++++.+++.++.+.+++|++..+++++++||++++.+++|++++++|++++
T Consensus       223 l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l~  281 (281)
T TIGR03340       223 GAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVVL  281 (281)
T ss_pred             HHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHhC
Confidence            89999999999999999999999999999999999999999999999999999999864

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.03  E-value=4.7e-09  Score=97.93  Aligned_cols=138  Identities=17%  Similarity=0.083  Sum_probs=108.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcc--CCCHHHHHHHHHHHHHHHHHHHHHHhCCCC-CC-Ch---------HHHHH-H
Q 018398          115 LLEWAVLVSPFFFWGTAMVAMKEVLP--KAGTFFVAAFRLIPAGLLLITFASSQGRKL-PS-GF---------NAWVS-I  180 (356)
Q Consensus       115 ~~g~l~ll~aa~~~~~~~~~~k~~~~--~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~-~~-~~---------~~~~~-~  180 (356)
                      ..|.++.++++++|+...+..|...+  +.+|..++.+....+.+.++|+....+... .. ..         ..... .
T Consensus       144 ~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (302)
T TIGR00817       144 WAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVS  223 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHH
Confidence            56899999999999999999998877  799999999999999999998876543211 00 00         01111 2


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccC
Q 018398          181 FLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA  252 (356)
Q Consensus       181 ~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~  252 (356)
                      +..+.......+.+++.+++++++..++++..+.|+++++++++++||+++..+++|.+++++|+.+.....
T Consensus       224 ~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k  295 (302)
T TIGR00817       224 LVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVK  295 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence            222332333344566789999999999999999999999999999999999999999999999999887643

specificities overlap.

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.03  E-value=8.7e-09  Score=95.22  Aligned_cols=180  Identities=12%  Similarity=0.054  Sum_probs=147.5

Q ss_pred             HHHHhhhcc--CCC-HHHHHHHHHHHHHHHHHHHHHHhCCCCCC--ChHHHHHHHHHHHHHHHHHHHHHHHHhhccChhH
Q 018398          132 MVAMKEVLP--KAG-TFFVAAFRLIPAGLLLITFASSQGRKLPS--GFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGL  206 (356)
Q Consensus       132 ~~~~k~~~~--~~~-p~~~~~~r~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~  206 (356)
                      ....|+..+  +.+ |..++.+++..+.+.++.....+..+.++  .+..+..++.+|++. +++..+-..++++.+++.
T Consensus        33 ~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~-~~~~v~~n~Sl~~v~VsF  111 (316)
T KOG1441|consen   33 IILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVF-CISHVLGNVSLSYVPVSF  111 (316)
T ss_pred             EEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHH-HHHHHhcchhhhccchhH
Confidence            334777777  544 89999998877777777666554433322  345677777778776 788899999999999999


Q ss_pred             HHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhhhc
Q 018398          207 GSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVS  286 (356)
Q Consensus       207 a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~G~llaLlaa~~~a~~~v~~r~~~  286 (356)
                      .+.+-.++|++++++++++.+|+.+...+..++..+.||.+....+     .+....|.+.++.+.+..++.+++.++..
T Consensus       112 ~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e-----~~fn~~G~i~a~~s~~~~al~~I~~~~ll  186 (316)
T KOG1441|consen  112 YQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTE-----LSFNLFGFISAMISNLAFALRNILSKKLL  186 (316)
T ss_pred             HHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeecc-----ccccHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999999999999999999999999999999999988744     34556899999999999999999999865


Q ss_pred             c----CCChHHHHHHHHHHHHHHHH-HHHHhhcCCC
Q 018398          287 K----YSDPVMATGWHMVIGGLPLM-VISVLNHDPV  317 (356)
Q Consensus       287 ~----~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~  317 (356)
                      +    +.|+.+.+.++.-++.+.++ |+....++..
T Consensus       187 ~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~  222 (316)
T KOG1441|consen  187 TSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNK  222 (316)
T ss_pred             hccccccCchHHHHHhhhHHHHHHhcchHhhhcccc
Confidence            3    47899999999999999988 7776655543

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.99  E-value=4e-08  Score=90.38  Aligned_cols=135  Identities=24%  Similarity=0.312  Sum_probs=110.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHH-HHHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHHHH
Q 018398          115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAA-FRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQG  193 (356)
Q Consensus       115 ~~g~l~ll~aa~~~~~~~~~~k~~~~~~~p~~~~~-~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  193 (356)
                      ..|.++.++++++|+...+..|... +.++..... +.+....+...+....... .+.....+......|+++.+.++.
T Consensus       153 ~~g~~~~l~a~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~i~~~  230 (292)
T COG0697         153 LLGLLLALAAALLWALYTALVKRLS-RLGPVTLALLLQLLLALLLLLLFFLSGFG-APILSRAWLLLLYLGVFSTGLAYL  230 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHHhcccc-ccCCHHHHHHHHHHHHHHHHHHHH
Confidence            5789999999999999999999776 666666666 4444233333333322222 344567888899999999778999


Q ss_pred             HHHHHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhcc
Q 018398          194 FLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAP  251 (356)
Q Consensus       194 ~~~~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~  251 (356)
                      +++++++..+++.++.+..+.|++.+++++++++|+++..+++|++++++|+.+....
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         231 LWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            9999999999999999999999999999999999999999999999999999988764

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.98  E-value=1.8e-08  Score=93.68  Aligned_cols=132  Identities=14%  Similarity=0.134  Sum_probs=92.8

Q ss_pred             HHHHHHHHHHHHHHHHhhhccCC--CHHHHHHHHHHHHHHHHHHHHHHhCCCC-CCChHHHHHHHHHHHHHHHHHHHHHH
Q 018398          120 VLVSPFFFWGTAMVAMKEVLPKA--GTFFVAAFRLIPAGLLLITFASSQGRKL-PSGFNAWVSIFLFALVDASCFQGFLA  196 (356)
Q Consensus       120 ~ll~aa~~~~~~~~~~k~~~~~~--~p~~~~~~r~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~  196 (356)
                      +.++++++|+.+.+..|...++.  +....+.+....+.+..+++........ ..+...+..+...|+. ..+++.+++
T Consensus       153 ~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-t~i~~~~~~  231 (296)
T PRK15430        153 IALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIADSSTSHMGQNPMSLNLLLIAAGIV-TTVPLLCFT  231 (296)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHccCCcccccCCcHHHHHHHHHHHHH-HHHHHHHHH
Confidence            46778999999999998865432  2333334444444333222211000001 1122223334444544 578999999


Q ss_pred             HHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccC
Q 018398          197 QGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA  252 (356)
Q Consensus       197 ~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~  252 (356)
                      +++++.+++.++++.+++|++.+++++++++|+++..+++|++++++|+.++..++
T Consensus       232 ~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~  287 (296)
T PRK15430        232 AAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDA  287 (296)
T ss_pred             HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999888754

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=98.93  E-value=1.8e-06  Score=79.77  Aligned_cols=229  Identities=14%  Similarity=0.042  Sum_probs=169.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhccC----CCHHHHHHHHHHHHHHHHHHHHHHhC----CCC----C----CChHHHHH
Q 018398          116 LEWAVLVSPFFFWGTAMVAMKEVLPK----AGTFFVAAFRLIPAGLLLITFASSQG----RKL----P----SGFNAWVS  179 (356)
Q Consensus       116 ~g~l~ll~aa~~~~~~~~~~k~~~~~----~~p~~~~~~r~~~~~l~~~~~~~~~~----~~~----~----~~~~~~~~  179 (356)
                      .-++.++...+.++...+..|+....    ..|....+.--++-.+++....++..    ++.    .    ..+++.++
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk   94 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK   94 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence            44666777778888888888876542    55777777777777777777766652    111    1    12345666


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccCC--C---
Q 018398          180 IFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAF--D---  254 (356)
Q Consensus       180 ~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~~--~---  254 (356)
                      +.+.+++- ++.+-++|.++.+.+++.-.+...+-.+.++++..++|++|++++||.++++-++|+.++-.+..  .   
T Consensus        95 ~~vPa~iY-alqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~  173 (345)
T KOG2234|consen   95 VSVPALIY-ALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAK  173 (345)
T ss_pred             HHHHHHHH-HHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCcc
Confidence            77666665 66677999999999999999999999999999999999999999999999999999999984331  1   


Q ss_pred             -CCCCchhhHHHHHHHHHHHHHHHHHHHHhhhccC--CChHHHHHHHHHHHHHHHHHHHHhhcCCCC--CcccccCCHHH
Q 018398          255 -ESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKY--SDPVMATGWHMVIGGLPLMVISVLNHDPVY--GESVKELTSSD  329 (356)
Q Consensus       255 -~~~~~~~~~G~llaLlaa~~~a~~~v~~r~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~  329 (356)
                       .........|....+.+++.-+...++.+|+.++  .+.+...-...++|.++.+...+..+....  ...+...+...
T Consensus       174 ~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~v  253 (345)
T KOG2234|consen  174 SESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIV  253 (345)
T ss_pred             CCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHHH
Confidence             1223456689999999999999999999998754  566777777778888888888776643322  22334566777


Q ss_pred             HHHHHHHHHHHHHHHH
Q 018398          330 ILALLYTSIFGSAISY  345 (356)
Q Consensus       330 ~~~~~~lgi~~s~l~~  345 (356)
                      |..++..++.+-.++.
T Consensus       254 w~vVl~~a~gGLlvs~  269 (345)
T KOG2234|consen  254 WLVVLLNAVGGLLVSL  269 (345)
T ss_pred             HHHHHHHhccchhHHH
Confidence            7777666644444433

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=98.91  E-value=5.1e-08  Score=85.38  Aligned_cols=135  Identities=12%  Similarity=0.056  Sum_probs=118.7

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHH
Q 018398          112 LGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCF  191 (356)
Q Consensus       112 ~~~~~g~l~ll~aa~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  191 (356)
                      .-+..|..+.+.+..+|+.+.+..|.+....+--.-+..-+.+++++.+|+-..+....-..+.-....+..++++..+.
T Consensus       144 ~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~~g~a~gm~vAaviv~Pig~~~ag~~l~~p~ll~laLgvavlSSalP  223 (292)
T COG5006         144 SLDPVGVALALGAGACWALYIVLGQRAGRAEHGTAGVAVGMLVAALIVLPIGAAQAGPALFSPSLLPLALGVAVLSSALP  223 (292)
T ss_pred             cCCHHHHHHHHHHhHHHHHHHHHcchhcccCCCchHHHHHHHHHHHHHhhhhhhhcchhhcChHHHHHHHHHHHHhcccc
Confidence            34467899999999999999999998886677777778889999999999987665544445566777788899999999


Q ss_pred             HHHHHHHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHH
Q 018398          192 QGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLL  246 (356)
Q Consensus       192 ~~~~~~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~  246 (356)
                      |.+-..++++.|...-+++.+++|.+.++.++++++|+++..||++++.++.+..
T Consensus       224 YsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa  278 (292)
T COG5006         224 YSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA  278 (292)
T ss_pred             hHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999999999999988765

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.90  E-value=6.3e-08  Score=76.35  Aligned_cols=70  Identities=17%  Similarity=0.156  Sum_probs=63.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhc
Q 018398          181 FLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEA  250 (356)
Q Consensus       181 ~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~  250 (356)
                      ...++++++.++.++.+++++.|.+.+..+..+.++++.+++++++|||+++.+++|++++++|++++..
T Consensus        40 ~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~  109 (111)
T PRK15051         40 LGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS  109 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            3445577788999999999999999999998899999999999999999999999999999999988864

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=98.88  E-value=1.3e-07  Score=83.97  Aligned_cols=182  Identities=20%  Similarity=0.221  Sum_probs=136.0

Q ss_pred             HHHHHHHhhhcc----C----CCHHHHHHHHHHHHHHHHHHHHHHhCCC------------CC---CChHHHHHHHHHHH
Q 018398          129 GTAMVAMKEVLP----K----AGTFFVAAFRLIPAGLLLITFASSQGRK------------LP---SGFNAWVSIFLFAL  185 (356)
Q Consensus       129 ~~~~~~~k~~~~----~----~~p~~~~~~r~~~~~l~~~~~~~~~~~~------------~~---~~~~~~~~~~~~g~  185 (356)
                      ..+.+..|++..    +    -+|+..+..-++.-++.+..+.+.+.+.            .+   .+.+. ...+..++
T Consensus        16 s~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p-~lfl~Pal   94 (372)
T KOG3912|consen   16 SFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNP-VLFLPPAL   94 (372)
T ss_pred             cHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCc-ceecChHH
Confidence            457777887653    1    2477777777766666666665554211            00   01122 22233556


Q ss_pred             HHHHHHHHHHHHHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccCCC---C--CCCch
Q 018398          186 VDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFD---E--SNSSL  260 (356)
Q Consensus       186 ~~~~~~~~~~~~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~~~---~--~~~~~  260 (356)
                      +. ..+..+.+.++.+++++.-+++.....+|+.+++.-+++.+++.+||+|+....+|++++...+..   .  .+.+.
T Consensus        95 ~D-i~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s~  173 (372)
T KOG3912|consen   95 CD-IAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYSS  173 (372)
T ss_pred             HH-HhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCcccccc
Confidence            66 555688899999999999999999999999999999999999999999999999999998876521   1  12245


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhhcc--CCChHHHHHHHHHHHHHHHHHHHHh
Q 018398          261 WGSGEWWMLLAAQSMAVGTVMVRWVSK--YSDPVMATGWHMVIGGLPLMVISVL  312 (356)
Q Consensus       261 ~~~G~llaLlaa~~~a~~~v~~r~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~  312 (356)
                      ...|+++.+++-+.-|+.+++.+|..+  +.+|+...+|..++|.++...++..
T Consensus       174 iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~  227 (372)
T KOG3912|consen  174 IITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIP  227 (372)
T ss_pred             chhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHH
Confidence            668999999999999999999988765  4689999999999997665555543

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.81  E-value=2.6e-07  Score=88.03  Aligned_cols=136  Identities=13%  Similarity=0.088  Sum_probs=101.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccC-------CCHHHHHHHHHHHHHHHHHHHHHHhCCC-C---------CCCh---
Q 018398          115 LLEWAVLVSPFFFWGTAMVAMKEVLPK-------AGTFFVAAFRLIPAGLLLITFASSQGRK-L---------PSGF---  174 (356)
Q Consensus       115 ~~g~l~ll~aa~~~~~~~~~~k~~~~~-------~~p~~~~~~r~~~~~l~~~~~~~~~~~~-~---------~~~~---  174 (356)
                      +.|.+++++++++|+...+..|...++       .++..+..+...++.++++|+....+.. .         ....   
T Consensus       193 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~  272 (350)
T PTZ00343        193 WLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTK  272 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccch
Confidence            569999999999999999999987753       5577777777888888888887643211 0         0000   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhc
Q 018398          175 NAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEA  250 (356)
Q Consensus       175 ~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~  250 (356)
                      ......++...+.+...+.+.+++++++++...++.+.+.|++++++++++++|+++..+++|.+++++|+++...
T Consensus       273 ~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~  348 (350)
T PTZ00343        273 GIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSL  348 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhh
Confidence            1111122222222233333444699999999999999999999999999999999999999999999999987643

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.78  E-value=1.5e-07  Score=87.35  Aligned_cols=129  Identities=14%  Similarity=0.007  Sum_probs=103.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHH----HHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHH
Q 018398          115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLI----PAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASC  190 (356)
Q Consensus       115 ~~g~l~ll~aa~~~~~~~~~~k~~~~~~~p~~~~~~r~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  190 (356)
                      .+|++..+++++.|+......|..  +.+|...++....    .+.++..++   ++. .+...+..+..++.|++ ..+
T Consensus       151 ~~Gi~~~l~sg~~y~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~Gi~-~~i  223 (290)
T TIGR00776       151 KKGILLLLMSTIGYLVYVVVAKAF--GVDGLSVLLPQAIGMVIGGIIFNLGH---ILA-KPLKKYAILLNILPGLM-WGI  223 (290)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHc--CCCcceehhHHHHHHHHHHHHHHHHH---hcc-cchHHHHHHHHHHHHHH-HHH
Confidence            469999999999999999999975  4788888555554    344334333   111 12223444555568888 589


Q ss_pred             HHHHHHHHhh-ccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHH----HHHHHHHHHHHHhhc
Q 018398          191 FQGFLAQGLQ-RTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGA----GGLVLGVIGLLLLEA  250 (356)
Q Consensus       191 ~~~~~~~al~-~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~----~g~~l~~~Gv~ll~~  250 (356)
                      ++.+|+.+.+ +.+++.+.++...+|+...+++.+++||+.+++++    +|.++.+.|+.++..
T Consensus       224 a~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       224 GNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             HHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence            9999999999 99999999999999999999999999999999999    999999999988754

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.77  E-value=2.6e-07  Score=74.69  Aligned_cols=120  Identities=16%  Similarity=0.095  Sum_probs=92.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHHHHHHH
Q 018398          117 EWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLA  196 (356)
Q Consensus       117 g~l~ll~aa~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  196 (356)
                      ++++.+++.++-+...++.|...++.+........  ...+.   ..           .....+++.|++++++++.++.
T Consensus         3 ~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~~--~~~~~---~~-----------~~p~~~i~lgl~~~~la~~~w~   66 (129)
T PRK02971          3 GYLWGLASVLLASVAQLSLKWGMSRLPLLSHAWDF--IAALL---AF-----------GLALRAVLLGLAGYALSMLCWL   66 (129)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhhCCCccchhHH--HHHHH---HH-----------hccHHHHHHHHHHHHHHHHHHH
Confidence            67888888888888899999887766543322211  00000   00           1112246788888899999999


Q ss_pred             HHhhccChhHHHHHHhhHHHHHHHHHHH--HhCCCCcHHHHHHHHHHHHHHHHhhccC
Q 018398          197 QGLQRTSAGLGSVIIDSQPLSVAVLAAL--LFGESIGLVGAGGLVLGVIGLLLLEAPA  252 (356)
Q Consensus       197 ~al~~~~~~~a~~i~~l~pv~~~il~~~--~l~e~~~~~~~~g~~l~~~Gv~ll~~~~  252 (356)
                      +++++.+++.+..+....++++.+.++.  ++||++++.+++|++++++|++++..++
T Consensus        67 ~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~  124 (129)
T PRK02971         67 KALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT  124 (129)
T ss_pred             HHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence            9999999999999999999889888885  8999999999999999999999998754

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=98.74  E-value=3.2e-06  Score=77.01  Aligned_cols=213  Identities=15%  Similarity=0.125  Sum_probs=155.3

Q ss_pred             HHHHHHhhhccCCC-HHHHHH--HHHHHHHHHHHHHHHHhCCCC-CCChHHHHHHHHHHHHHHHHHHHHHHHHhhccChh
Q 018398          130 TAMVAMKEVLPKAG-TFFVAA--FRLIPAGLLLITFASSQGRKL-PSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAG  205 (356)
Q Consensus       130 ~~~~~~k~~~~~~~-p~~~~~--~r~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~  205 (356)
                      ...++.|.+....+ |..+..  .+++...+.+...-..+-.+. +..++..++.+-..++- .+..+.-..+++|.+..
T Consensus        26 lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf-~~~i~t~~~slk~lnVp  104 (314)
T KOG1444|consen   26 LMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLF-VGMLFTGSKSLKYLNVP  104 (314)
T ss_pred             HHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHH-HHHHHHccccccccCch
Confidence            35667787777655 555555  888777766655544332222 33455555555555554 44445556899999999


Q ss_pred             HHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhhh
Q 018398          206 LGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWV  285 (356)
Q Consensus       206 ~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~G~llaLlaa~~~a~~~v~~r~~  285 (356)
                      .-+++....|+++++....++|.+++...|..+....+|......++     .+....|+.+++...+.-+.+.+..|+.
T Consensus       105 m~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d-----~sf~~~gY~w~~~n~~~~a~~~v~~kk~  179 (314)
T KOG1444|consen  105 MFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTD-----LSFNLRGYSWALANCLTTAAFVVYVKKS  179 (314)
T ss_pred             HHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhcccc-----ceecchhHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999988888766     2233348999999999999999999986


Q ss_pred             cc--CCChHHHHHHHHHHHHHHHHHHHHhhcCCC-CCccc-ccCCHHHHHHHHHHHHHHHHHHHHHH
Q 018398          286 SK--YSDPVMATGWHMVIGGLPLMVISVLNHDPV-YGESV-KELTSSDILALLYTSIFGSAISYGVY  348 (356)
Q Consensus       286 ~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~lgi~~s~l~~~l~  348 (356)
                      .+  +.+-...+.|..+.......+..++.++.. ...+. ...+...|..+...|+.+.++.|..+
T Consensus       180 vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s~  246 (314)
T KOG1444|consen  180 VDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGFGISYTSF  246 (314)
T ss_pred             hccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHH
Confidence            54  345667888888999888888887777633 11111 12345567778888887777777654

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.70  E-value=1.1e-06  Score=73.29  Aligned_cols=130  Identities=20%  Similarity=0.196  Sum_probs=107.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcc-------CCCHHHHHHHHHHHHHHHHHHHHHHhCCCC--------CC-----ChHH
Q 018398          117 EWAVLVSPFFFWGTAMVAMKEVLP-------KAGTFFVAAFRLIPAGLLLITFASSQGRKL--------PS-----GFNA  176 (356)
Q Consensus       117 g~l~ll~aa~~~~~~~~~~k~~~~-------~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~--------~~-----~~~~  176 (356)
                      |.++.+.+.++.+...+..|...+       +.++.++.......+.+++++.....+...        ..     ..+.
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            467889999999999999886554       467999999999999999999887765332        00     1233


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHH
Q 018398          177 WVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLL  247 (356)
Q Consensus       177 ~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~l  247 (356)
                      +..++..|++. +..+.+.+..++++++...+++...-.+++.++++++++|+++..+++|++++++|+++
T Consensus        81 ~~~~~~~~~~~-~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~  150 (153)
T PF03151_consen   81 IFLLILSGLLA-FLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence            44555556655 67778999999999999999999999999999999999999999999999999999875

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.69  E-value=6e-06  Score=74.55  Aligned_cols=167  Identities=13%  Similarity=0.016  Sum_probs=122.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHH-HhhHHHHHHH
Q 018398          142 AGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVI-IDSQPLSVAV  220 (356)
Q Consensus       142 ~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i-~~l~pv~~~i  220 (356)
                      -+|.+..+.-...+.++-+...+..+.....+.+.+...++.|++- .+++..++.++++.+++.+-.+ ..++-+.+.+
T Consensus        10 G~~~~Q~lG~t~Gali~alv~~~~~~p~~~~~~~~~~~~~lsG~~W-~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl   88 (269)
T PF06800_consen   10 GKPANQILGTTIGALIFALVVFLFRQPAFSMSGTSFIVAFLSGAFW-AIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSL   88 (269)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcceeeeccchhHHHHHHHH
Confidence            3477776666666666665555555554433336666666667766 8899999999999999999977 6888888999


Q ss_pred             HHHHHhCCCCcHHH----HHHHHHHHHHHHHhhccCCCCC---CCchhhHHHHHHHHHHHHHHHHHHHHhhhccCCChHH
Q 018398          221 LAALLFGESIGLVG----AGGLVLGVIGLLLLEAPAFDES---NSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVM  293 (356)
Q Consensus       221 l~~~~l~e~~~~~~----~~g~~l~~~Gv~ll~~~~~~~~---~~~~~~~G~llaLlaa~~~a~~~v~~r~~~~~~~~~~  293 (356)
                      ++.++++|--+..+    .+++++.++|+++....+.+..   +..+..+|.+..+++.+.|..|.+..|..  +.+++.
T Consensus        89 ~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~--~~~~~~  166 (269)
T PF06800_consen   89 IGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAF--HVSGWS  166 (269)
T ss_pred             HHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhc--CCChhH
Confidence            99999999777665    4488899999999988763322   23456789999999999999999998874  567777


Q ss_pred             HHHHHHHHHHHHHHHHHH
Q 018398          294 ATGWHMVIGGLPLMVISV  311 (356)
Q Consensus       294 ~~~~~~~~~~i~~~~~~~  311 (356)
                      ...-+.+--.+...++..
T Consensus       167 ~~lPqaiGm~i~a~i~~~  184 (269)
T PF06800_consen  167 AFLPQAIGMLIGAFIFNL  184 (269)
T ss_pred             hHHHHHHHHHHHHHHHhh
Confidence            766554433333333333

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=98.55  E-value=5.4e-07  Score=76.08  Aligned_cols=110  Identities=15%  Similarity=0.063  Sum_probs=93.0

Q ss_pred             HHHHHHHHHHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccCCCCCCCchhhHHHHHH
Q 018398          189 SCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWM  268 (356)
Q Consensus       189 ~~~~~~~~~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~G~lla  268 (356)
                      .+.++.|..|++..++++++.+....-.|+.+++++.+|+|+...++++.++++.|++++...+.  . ..+-+.|..++
T Consensus        64 t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN--~-~a~e~iGi~~A  140 (290)
T KOG4314|consen   64 TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN--E-HADEIIGIACA  140 (290)
T ss_pred             ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc--h-hhhhhhhHHHH
Confidence            45678999999999999999999999999999999999999999999999999999999986441  1 22345799999


Q ss_pred             HHHHHHHHHHHHHHhhhccCCChHHHHHHHHHH
Q 018398          269 LLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVI  301 (356)
Q Consensus       269 Llaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~  301 (356)
                      ..+|..-++|-+.-|++....+.-...-+....
T Consensus       141 V~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~L  173 (290)
T KOG4314|consen  141 VGSAFMAALYKVLFKMFIGNANFGDAAHFMSCL  173 (290)
T ss_pred             HHHHHHHHHHHHHHHHHhccCcchhHHHHHHHH
Confidence            999999999999999987766655544444433

>PRK13499 rhamnose-proton symporter; Provisional

Probab=98.54  E-value=0.00014  Score=68.34  Aligned_cols=165  Identities=12%  Similarity=0.033  Sum_probs=114.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHH--hCCC----CC-CChHHHHHHHHHHH
Q 018398          113 GMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASS--QGRK----LP-SGFNAWVSIFLFAL  185 (356)
Q Consensus       113 ~~~~g~l~ll~aa~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~--~~~~----~~-~~~~~~~~~~~~g~  185 (356)
                      +...|++..+++.++||+.++..|+ .++- ++|....-..+-.-++.|+..-  ..+.    .. .+.+.+...++.|+
T Consensus         4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~w-~wE~~W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G~   81 (345)
T PRK13499          4 AIILGIIWHLIGGASSGSFYAPFKK-VKKW-SWETMWSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFGA   81 (345)
T ss_pred             hhHHHHHHHHHHHHHhhcccccccc-cCCC-chhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHHH
Confidence            3467999999999999999999998 4433 3332221111111111121110  0011    11 23456666666666


Q ss_pred             HHHHHHHHHHHHHhhccChhHHHHH-HhhHHHHHHHHHHHHhCCCC-------cHHHHHHHHHHHHHHHHhhc----cCC
Q 018398          186 VDASCFQGFLAQGLQRTSAGLGSVI-IDSQPLSVAVLAALLFGESI-------GLVGAGGLVLGVIGLLLLEA----PAF  253 (356)
Q Consensus       186 ~~~~~~~~~~~~al~~~~~~~a~~i-~~l~pv~~~il~~~~l~e~~-------~~~~~~g~~l~~~Gv~ll~~----~~~  253 (356)
                      +- ..++..++.++++.+.+.+..+ ..+.-++..++..++++|=.       .....+|++++++|+++...    .+.
T Consensus        82 ~W-~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~~  160 (345)
T PRK13499         82 LW-GIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKER  160 (345)
T ss_pred             HH-HhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhccc
Confidence            66 8889999999999999999866 89999999999999988643       34568999999999999998    432


Q ss_pred             CC----CCCchhhHHHHHHHHHHHHHHHHHH
Q 018398          254 DE----SNSSLWGSGEWWMLLAAQSMAVGTV  280 (356)
Q Consensus       254 ~~----~~~~~~~~G~llaLlaa~~~a~~~v  280 (356)
                      +.    ....+..+|.++++++.+.+++|+.
T Consensus       161 ~~~~~~~~~~~~~KGi~ialisgi~~~~f~~  191 (345)
T PRK13499        161 KMGIKKAEEFNLKKGLILAVMSGIFSACFSF  191 (345)
T ss_pred             ccccccccccchHhHHHHHHHHHHHHHHHHH
Confidence            11    2234567999999999999999994

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=98.53  E-value=4.7e-06  Score=75.13  Aligned_cols=202  Identities=11%  Similarity=0.061  Sum_probs=144.5

Q ss_pred             cCCC-HHHHHHHHHHHHHHHHHHHHHHhCCC-----CCCChHHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHhh
Q 018398          140 PKAG-TFFVAAFRLIPAGLLLITFASSQGRK-----LPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDS  213 (356)
Q Consensus       140 ~~~~-p~~~~~~r~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~l  213 (356)
                      .+++ |..++...+++-.++-.......+..     .+..|++..+-.....+..++.-.+-.++++|++.+.-++....
T Consensus        40 ~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSS  119 (349)
T KOG1443|consen   40 KNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSS  119 (349)
T ss_pred             cCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeecccc
Confidence            3455 88888888887766655554433222     23455555544444444447777788899999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhhhccC-----
Q 018398          214 QPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKY-----  288 (356)
Q Consensus       214 ~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~G~llaLlaa~~~a~~~v~~r~~~~~-----  288 (356)
                      .++|+.+++.+|-=||+++.-..-+.++.+|+++....+     .+....|..+.+++.++-++-..+.+.+.++     
T Consensus       120 si~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~Ks-----Tqf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~  194 (349)
T KOG1443|consen  120 SILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKS-----TQFNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAK  194 (349)
T ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecc-----cceeehhHHHHHHHHHhhhhhHHHHHHHHhcCcccc
Confidence            999999999999889999999999999999999988866     2234569999999999998888888776654     


Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHhhcCCCCC---cccccCCH-HHHHHHHHHHHHHHHHHHHH
Q 018398          289 SDPVMATGWHMVIGGLPLMVISVLNHDPVYG---ESVKELTS-SDILALLYTSIFGSAISYGV  347 (356)
Q Consensus       289 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~lgi~~s~l~~~l  347 (356)
                      .+|...+....-.-.+.+++..+.+|++...   ..+...+. ..+..+.+++ .+..++|.+
T Consensus       195 ~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~-l~g~laF~l  256 (349)
T KOG1443|consen  195 RNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLIS-LGGLLAFLL  256 (349)
T ss_pred             CCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHH-HHHHHHHHH
Confidence            3577777777777778888888888876532   11122232 2344444454 455555554

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.48  E-value=2.2e-05  Score=70.86  Aligned_cols=211  Identities=11%  Similarity=0.008  Sum_probs=158.9

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHhhHHHHHHHHH
Q 018398          143 GTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLA  222 (356)
Q Consensus       143 ~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~l~pv~~~il~  222 (356)
                      ++..+.+.+-+++.++-..++..+++. ....+.|+.+...++-+ .++-.|.+.|++|++=-.-.+--..--+-+++++
T Consensus        50 ~~~fL~~~q~l~~~~~s~~~l~~~k~~-~~~~apl~~y~~is~tn-~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg  127 (327)
T KOG1581|consen   50 HSLFLVFCQRLVALLVSYAMLKWWKKE-LSGVAPLYKYSLISFTN-TLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMG  127 (327)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhccccc-CCCCCchhHHhHHHHHh-hcchHHHHHHHHhccchHHHHHHHhhhhHHHHHH
Confidence            588888888888888776555444444 33447788888888888 5666899999999998888887777777788999


Q ss_pred             HHHhCCCCcHHHHHHHHHHHHHHHHhhccCCCC----CCCchhhHHHHHHHHHHHHHHHHHHHHhhhcc--CCChHHHHH
Q 018398          223 ALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDE----SNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSK--YSDPVMATG  296 (356)
Q Consensus       223 ~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~~~~----~~~~~~~~G~llaLlaa~~~a~~~v~~r~~~~--~~~~~~~~~  296 (356)
                      .++.|.|++..+.+..+++-+|+-+....+.++    ....+...|..+....-+.=++.+....++-+  +.+...+++
T Consensus       128 ~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~  207 (327)
T KOG1581|consen  128 TLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMF  207 (327)
T ss_pred             HHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHH
Confidence            999999999999999999999998887754222    12234457998888888888888888777655  467899999


Q ss_pred             HHHHHHHHHHHHHHHhhcCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 018398          297 WHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGK  356 (356)
Q Consensus       297 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lgi~~s~l~~~l~~~al~~~g  356 (356)
                      +..+++++......+..+.....-.+....++.+.-++..+ .|.++++.+.++-+++.|
T Consensus       208 ~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s-~~gavGQ~FI~~TI~~FG  266 (327)
T KOG1581|consen  208 GVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYS-TCGAVGQLFIFYTIERFG  266 (327)
T ss_pred             HHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHH-HhhhhhhheehhhHhhcc
Confidence            99999999988885443322111112334667788888888 688888888888777755

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.47  E-value=1e-05  Score=75.12  Aligned_cols=123  Identities=17%  Similarity=0.109  Sum_probs=90.4

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHH
Q 018398          111 ELGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASC  190 (356)
Q Consensus       111 ~~~~~~g~l~ll~aa~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  190 (356)
                      +.....|.++.+.++++-+....+.|+...+.+.   .-.|-              +.......++  ..++.|++....
T Consensus         2 ~~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~---~~~~~--------------~~~~~~~l~~--~~W~~G~~~~~~   62 (300)
T PF05653_consen    2 NTDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPR---GSLRA--------------GSGGRSYLRR--PLWWIGLLLMVL   62 (300)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---ccccc--------------cchhhHHHhh--HHHHHHHHHHhc
Confidence            3455779999999999999999999986442221   00000              0000000111  223345555566


Q ss_pred             HHHHHHHHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccC
Q 018398          191 FQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA  252 (356)
Q Consensus       191 ~~~~~~~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~  252 (356)
                      +..+.+.|+.+.|++..+.+..+.-++.++++..++|||+++.+++|++++++|..++..-.
T Consensus        63 g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~  124 (300)
T PF05653_consen   63 GEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFA  124 (300)
T ss_pred             chHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeC
Confidence            77888999999999999999999999999999999999999999999999999998877544

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=98.46  E-value=1.1e-06  Score=77.82  Aligned_cols=206  Identities=15%  Similarity=0.145  Sum_probs=144.0

Q ss_pred             HHhhhccC----CC-HHHHHHHHHHHHHHHHHHHHHHhCC--------CCCCCh---HHHHHHHHHHHHHHHHHHHHHHH
Q 018398          134 AMKEVLPK----AG-TFFVAAFRLIPAGLLLITFASSQGR--------KLPSGF---NAWVSIFLFALVDASCFQGFLAQ  197 (356)
Q Consensus       134 ~~k~~~~~----~~-p~~~~~~r~~~~~l~~~~~~~~~~~--------~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~  197 (356)
                      ..|++.+.    ++ |..++..+.++...+++.+.....+        ..+.+.   ++...+...=..    ...+-.+
T Consensus        46 ~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~----mI~fnnl  121 (347)
T KOG1442|consen   46 LNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFIL----MISFNNL  121 (347)
T ss_pred             hHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheeee----ehhccce
Confidence            34554442    44 9999999999888888776543321        111222   233333322222    2234457


Q ss_pred             HhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccCCCCCCCchhhHHHHHHHHHHHHHHH
Q 018398          198 GLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAV  277 (356)
Q Consensus       198 al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~G~llaLlaa~~~a~  277 (356)
                      .++|++++.-.+-..+..+|++++.++++|+|-+.....++.++++|-.+=...+  +..+.....|.+++.++.++-|+
T Consensus       122 cL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE--~~~~~ls~~GvifGVlaSl~vAl  199 (347)
T KOG1442|consen  122 CLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQE--GSTGTLSWIGVIFGVLASLAVAL  199 (347)
T ss_pred             ehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccc--cccCccchhhhHHHHHHHHHHHH
Confidence            8999999988888999999999999999999999999888888888865544333  33334456799999999999999


Q ss_pred             HHHHHhhhccCC--ChHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccc-CCHHHHHHHHHHHHHHHHHHH
Q 018398          278 GTVMVRWVSKYS--DPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKE-LTSSDILALLYTSIFGSAISY  345 (356)
Q Consensus       278 ~~v~~r~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~lgi~~s~l~~  345 (356)
                      ..+..|+.....  -.+...+|..+.+.+.++|...+.++...-...++ ++.+.|..+..-|+++..++|
T Consensus       200 naiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgy  270 (347)
T KOG1442|consen  200 NAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGY  270 (347)
T ss_pred             HHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhh
Confidence            999999865433  36778889999999999999998775432111122 356677777777777666655

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.45  E-value=2.3e-06  Score=74.27  Aligned_cols=208  Identities=10%  Similarity=0.001  Sum_probs=144.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCC-CCCCChHHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHhhHHHHHHHHH
Q 018398          144 TFFVAAFRLIPAGLLLITFASSQGR-KLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLA  222 (356)
Q Consensus       144 p~~~~~~r~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~l~pv~~~il~  222 (356)
                      ...+.+++.....++.=.+...+++ +... .+.+...  .....+.++......|++++|=-...+--+.-|+=+++++
T Consensus        53 alaLVf~qC~~N~vfAkvl~~ir~~~~~D~-t~~~~Ya--Acs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilG  129 (337)
T KOG1580|consen   53 ALALVFFQCTANTVFAKVLFLIRKKTEIDN-TPTKMYA--ACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILG  129 (337)
T ss_pred             HHHHHHHHHHHHHHHHHhheeecccccccC-CcchHHH--HHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeee
Confidence            4445555555555444333333332 2221 1233322  2344456666777899999999988888999999999999


Q ss_pred             HHHhCCCCcHHHHHHHHHHHHHHHHhhccCC--CCCCCchhhHHHHHHHHHHHHHHHHHHHHhhhccCC--ChHHHHHHH
Q 018398          223 ALLFGESIGLVGAGGLVLGVIGLLLLEAPAF--DESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYS--DPVMATGWH  298 (356)
Q Consensus       223 ~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~~--~~~~~~~~~~G~llaLlaa~~~a~~~v~~r~~~~~~--~~~~~~~~~  298 (356)
                      .++.+++..|++...++++++||.+.+..+.  .+........|.++.+++-.+=++......+++..+  ....++.+.
T Consensus       130 Vl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~  209 (337)
T KOG1580|consen  130 VLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYT  209 (337)
T ss_pred             hhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHH
Confidence            9999999999999999999999999998752  233445667899999999999999998887776543  455677788


Q ss_pred             HHHHHHHHHHHHHhhcCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 018398          299 MVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKG  355 (356)
Q Consensus       299 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lgi~~s~l~~~l~~~al~~~  355 (356)
                      .+.+.+.+...+++.++..-...+...-+..|+-+..++ +++.+++++.+.-+...
T Consensus       210 NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~a-i~s~LGQ~fIF~tv~~F  265 (337)
T KOG1580|consen  210 NLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLA-IASCLGQWFIFKTVEEF  265 (337)
T ss_pred             HHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHH-HHHHhhhHHHHHHHHHh
Confidence            888887777766665442110111233456777777788 78889988877765543

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=98.28  E-value=3.5e-05  Score=72.26  Aligned_cols=140  Identities=10%  Similarity=0.040  Sum_probs=109.2

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHhCC-C---CCCChHHHHHHHHHHHHH
Q 018398          112 LGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGR-K---LPSGFNAWVSIFLFALVD  187 (356)
Q Consensus       112 ~~~~~g~l~ll~aa~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~-~---~~~~~~~~~~~~~~g~~~  187 (356)
                      .+..+|.++++++++++|...+..+...++.++.++..+=-+.+.++..+.+...++ .   .....+....++.. .++
T Consensus       164 ~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~-~~~  242 (334)
T PF06027_consen  164 SNPILGDLLALLGAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGY-ALC  242 (334)
T ss_pred             CccchhHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHH-HHH
Confidence            355789999999999999999999999999998887777666777776666554332 1   22233433333333 334


Q ss_pred             HHHHHHHHHHHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccC
Q 018398          188 ASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA  252 (356)
Q Consensus       188 ~~~~~~~~~~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~  252 (356)
                      .+..|.+.-..++.++++...+=..+..++.++++.+++++++++..++|.+++++|.++....+
T Consensus       243 lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~  307 (334)
T PF06027_consen  243 LFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAE  307 (334)
T ss_pred             HHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccC
Confidence            46666777788999999888888888999999999999999999999999999999999987755

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=98.17  E-value=7e-05  Score=58.71  Aligned_cols=70  Identities=20%  Similarity=0.243  Sum_probs=62.5

Q ss_pred             HHHHHHHHHHHHHHHHhhccChhHHHHH-HhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccC
Q 018398          183 FALVDASCFQGFLAQGLQRTSAGLGSVI-IDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA  252 (356)
Q Consensus       183 ~g~~~~~~~~~~~~~al~~~~~~~a~~i-~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~  252 (356)
                      ..++++..+++++..++++.|.+.+..+ ..+.-+.+.+++++++||++++.+++|+.+.++|++++...+
T Consensus        35 ~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            4456667888999999999999999866 778999999999999999999999999999999999997644

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.11  E-value=3.3e-05  Score=60.91  Aligned_cols=89  Identities=19%  Similarity=0.250  Sum_probs=77.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhccCCChHHHHHHHHHHHHHHHHHHHHhhcCCCCCcccccCCHHHHHHHHHHHHHHHHH
Q 018398          264 GEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAI  343 (356)
Q Consensus       264 G~llaLlaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lgi~~s~l  343 (356)
                      ..+++|++|+++++..++.|--.++.||...++...++..+++..+.+..++...   ....+.+.|..++..| +.+++
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~---~~~~~~k~~lflilSG-la~gl   79 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQA---GGEIGPKSWLFLILSG-LAGGL   79 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceec---ccccCcceehhhhHHH-HHHHH
Confidence            4689999999999999999998899999999999999999999988888766542   2346788899999888 89999


Q ss_pred             HHHHHHHHhccCC
Q 018398          344 SYGVYFYSATKGK  356 (356)
Q Consensus       344 ~~~l~~~al~~~g  356 (356)
                      +..+|++|++++.
T Consensus        80 swl~Yf~ALk~G~   92 (140)
T COG2510          80 SWLLYFRALKKGK   92 (140)
T ss_pred             HHHHHHHHHhcCC
Confidence            9999999999873

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.05  E-value=0.00012  Score=66.34  Aligned_cols=129  Identities=13%  Similarity=-0.029  Sum_probs=95.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHHH
Q 018398          113 GMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQ  192 (356)
Q Consensus       113 ~~~~g~l~ll~aa~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  192 (356)
                      +..++++.++++.+.|..+.++.|.  .+++++...+-+.+...+..+.+....++..  ..+..++-++.|++- ..++
T Consensus       135 ~~~kgi~~Ll~stigy~~Y~~~~~~--~~~~~~~~~lPqaiGm~i~a~i~~~~~~~~~--~~k~~~~nil~G~~w-~ign  209 (269)
T PF06800_consen  135 NMKKGILALLISTIGYWIYSVIPKA--FHVSGWSAFLPQAIGMLIGAFIFNLFSKKPF--FEKKSWKNILTGLIW-GIGN  209 (269)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHh--cCCChhHhHHHHHHHHHHHHHHHhhcccccc--cccchHHhhHHHHHH-HHHH
Confidence            3456899999999999988888886  3578887777665554444444444332222  224445556667766 7888


Q ss_pred             HHHHHHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHH----HHHHHHHHHH
Q 018398          193 GFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAG----GLVLGVIGLL  246 (356)
Q Consensus       193 ~~~~~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~----g~~l~~~Gv~  246 (356)
                      .+++.+.+....+.+..+..+.+++..+.+.+++||+=+++++.    |+++.++|.+
T Consensus       210 l~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i  267 (269)
T PF06800_consen  210 LFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI  267 (269)
T ss_pred             HHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence            99999999999999999999999999999999999999988764    4444444443

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=98.02  E-value=0.0002  Score=66.85  Aligned_cols=135  Identities=14%  Similarity=0.167  Sum_probs=109.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcc--CCCHHHHHHHHHHHHHHHHHHHHHH--hCCCCC------CChHHHHHHHHHHHH
Q 018398          117 EWAVLVSPFFFWGTAMVAMKEVLP--KAGTFFVAAFRLIPAGLLLITFASS--QGRKLP------SGFNAWVSIFLFALV  186 (356)
Q Consensus       117 g~l~ll~aa~~~~~~~~~~k~~~~--~~~p~~~~~~r~~~~~l~~~~~~~~--~~~~~~------~~~~~~~~~~~~g~~  186 (356)
                      |+++++++.++-|......+...+  +.++.+.+++....+.+..++....  .+...+      ..+..+..+++..+.
T Consensus       155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~  234 (303)
T PF08449_consen  155 GIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLT  234 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHH
Confidence            899999999999999999988776  4779999999999998888877776  322111      112344445555555


Q ss_pred             HHHHHHHHHHHHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccC
Q 018398          187 DASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA  252 (356)
Q Consensus       187 ~~~~~~~~~~~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~  252 (356)
                      + ..+..+.+.-.+..++...+++..+--+++.+++.+++++++++.+|+|+++++.|+.+-..+.
T Consensus       235 ~-~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~  299 (303)
T PF08449_consen  235 G-ALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAK  299 (303)
T ss_pred             H-HHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhh
Confidence            5 5666777788999999999999999999999999999999999999999999999998876543

; GO: 0055085 transmembrane transport

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.99  E-value=0.00025  Score=55.34  Aligned_cols=65  Identities=18%  Similarity=0.230  Sum_probs=58.4

Q ss_pred             HHHHHHHHHHHHHHhhccChhHHHHH-HhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhh
Q 018398          185 LVDASCFQGFLAQGLQRTSAGLGSVI-IDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLE  249 (356)
Q Consensus       185 ~~~~~~~~~~~~~al~~~~~~~a~~i-~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~  249 (356)
                      ++++..++++...++++.|.+.+..+ ...-.+.+.+++.+++||++++.+++|+.+.++|++++-
T Consensus        42 ~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         42 LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            44557788999999999999999755 789999999999999999999999999999999998864

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.98  E-value=6.8e-05  Score=57.67  Aligned_cols=68  Identities=26%  Similarity=0.360  Sum_probs=60.8

Q ss_pred             HHHHHHHHHHHHHHHHhhccChhHHHHH-HhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhc
Q 018398          183 FALVDASCFQGFLAQGLQRTSAGLGSVI-IDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEA  250 (356)
Q Consensus       183 ~g~~~~~~~~~~~~~al~~~~~~~a~~i-~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~  250 (356)
                      ..++++..++.+..+++++.|.+.+..+ ...-.+.+.+.+++++||+++..+++|+.+.++|++.+-.
T Consensus        35 l~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          35 LTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL  103 (106)
T ss_pred             HHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence            3455557788999999999999999754 9999999999999999999999999999999999998865

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=97.98  E-value=3.7e-06  Score=74.42  Aligned_cols=137  Identities=15%  Similarity=0.112  Sum_probs=107.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHhC-CCCCCChHHHHHHHHHHHHHHHHHHH
Q 018398          115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQG-RKLPSGFNAWVSIFLFALVDASCFQG  193 (356)
Q Consensus       115 ~~g~l~ll~aa~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~  193 (356)
                      .++....+.++++-+..+++.|++.++.+.......=.+++.+.-+..+..-+ -.+|..+++|+.+..+|+.+ ++++.
T Consensus       190 ~~gt~aai~s~lf~asvyIilR~iGk~~h~~msvsyf~~i~lV~s~I~~~~ig~~~lP~cgkdr~l~~~lGvfg-figQI  268 (346)
T KOG4510|consen  190 IPGTVAAISSVLFGASVYIILRYIGKNAHAIMSVSYFSLITLVVSLIGCASIGAVQLPHCGKDRWLFVNLGVFG-FIGQI  268 (346)
T ss_pred             CCchHHHHHhHhhhhhHHHHHHHhhccccEEEEehHHHHHHHHHHHHHHhhccceecCccccceEEEEEehhhh-hHHHH
Confidence            34567788888888999999999888766443333333344433333332222 34566778999999999999 88899


Q ss_pred             HHHHHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccC
Q 018398          194 FLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA  252 (356)
Q Consensus       194 ~~~~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~  252 (356)
                      +...++|.--++..+++.++..++..+...+|++|-++++.|.|+++++...+......
T Consensus       269 llTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~k  327 (346)
T KOG4510|consen  269 LLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKK  327 (346)
T ss_pred             HHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999888877776544

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.95  E-value=8.4e-05  Score=59.06  Aligned_cols=70  Identities=26%  Similarity=0.376  Sum_probs=62.7

Q ss_pred             HHHHHHHHHHHHHHHHhhccChhHHHHH-HhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccC
Q 018398          183 FALVDASCFQGFLAQGLQRTSAGLGSVI-IDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA  252 (356)
Q Consensus       183 ~g~~~~~~~~~~~~~al~~~~~~~a~~i-~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~  252 (356)
                      ..+.+++.+++++..++++.|.+.+..+ ..+.-+.+.+++.+++||++++.+++|+.++++|++++-..+
T Consensus        35 ~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         35 LMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            4555667889999999999999999866 679999999999999999999999999999999999887644

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.95  E-value=0.00033  Score=57.41  Aligned_cols=129  Identities=16%  Similarity=0.091  Sum_probs=97.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhccCCC-HHHHHHHHHHHHHHHHHHHHHHhCCC-CCCChHHHHHHHHHHHHHHHHHHHHH
Q 018398          118 WAVLVSPFFFWGTAMVAMKEVLPKAG-TFFVAAFRLIPAGLLLITFASSQGRK-LPSGFNAWVSIFLFALVDASCFQGFL  195 (356)
Q Consensus       118 ~l~ll~aa~~~~~~~~~~k~~~~~~~-p~~~~~~r~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~  195 (356)
                      .++.+++.++-+....++-.+.+..+ |+..+++.+..+.+.+..+....+++ .+..++..++..+-|+++ ...-.+.
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~~lGG~lG-~~~V~~~   81 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWAYLGGLLG-VFFVLSN   81 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHHhccHHHH-HHHHHHH
Confidence            45667777777777777766667676 99999999999999998888877653 222222233444467776 6666788


Q ss_pred             HHHhhccChhHHHHH-HhhHHHHHHHHHHH----HhCCCCcHHHHHHHHHHHHHHHH
Q 018398          196 AQGLQRTSAGLGSVI-IDSQPLSVAVLAAL----LFGESIGLVGAGGLVLGVIGLLL  247 (356)
Q Consensus       196 ~~al~~~~~~~a~~i-~~l~pv~~~il~~~----~l~e~~~~~~~~g~~l~~~Gv~l  247 (356)
                      .+.....+++.+..+ ..-+-+...+++.+    .-++++++.+++|+++.++|+.+
T Consensus        82 ~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   82 IILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            889999999998865 66667777788875    35789999999999999999864

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.89  E-value=0.00016  Score=56.12  Aligned_cols=66  Identities=20%  Similarity=0.229  Sum_probs=59.7

Q ss_pred             HHHHHHHHHHHHHHhhccChhHHHHH-HhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhc
Q 018398          185 LVDASCFQGFLAQGLQRTSAGLGSVI-IDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEA  250 (356)
Q Consensus       185 ~~~~~~~~~~~~~al~~~~~~~a~~i-~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~  250 (356)
                      ++++..++++...+++..|.+.+..+ ..+-.+.+.+++.+++||++++.+++|+.+.++|++.+..
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            55567788999999999999999755 7799999999999999999999999999999999998854

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=97.82  E-value=0.00057  Score=59.21  Aligned_cols=212  Identities=16%  Similarity=0.153  Sum_probs=141.9

Q ss_pred             HHHHHhhhccC--CC-HHHHHHHHHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhhccChhHH
Q 018398          131 AMVAMKEVLPK--AG-TFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLG  207 (356)
Q Consensus       131 ~~~~~k~~~~~--~~-p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a  207 (356)
                      +.+..|+....  .+ -+.+.+++.....+.++.+-+.+-.+.+.  ++....+...++- ....+.--.+++|.+...-
T Consensus        21 mTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR~--t~aK~WfpiSfLL-v~MIyt~SKsLqyL~vpiY   97 (309)
T COG5070          21 MTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFRL--TKAKKWFPISFLL-VVMIYTSSKSLQYLAVPIY   97 (309)
T ss_pred             HHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhheeh--hhhhhhcCHHHHH-HHHHHhcccceeeeeeeHH
Confidence            45667777654  33 45566666665555544443333222222  2222223333333 2222344579999999999


Q ss_pred             HHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccCCCCC--CCchhhHHHHHHHHHHHHHHHHHHHHhhh
Q 018398          208 SVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDES--NSSLWGSGEWWMLLAAQSMAVGTVMVRWV  285 (356)
Q Consensus       208 ~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~~~~~--~~~~~~~G~llaLlaa~~~a~~~v~~r~~  285 (356)
                      +++-.+..++++....+++|.|++-.+....++.++.-+.-..++.+..  .....+.|++|+..-.+.-+.+-...|+.
T Consensus        98 TiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN~GY~Wm~~NclssaafVL~mrkr  177 (309)
T COG5070          98 TIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILNPGYLWMFTNCLSSAAFVLIMRKR  177 (309)
T ss_pred             HHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccCCceEEEehhhHhHHHHHHHHHHh
Confidence            9999999999999999999999999999999888888777776652111  11245679999999999999998888875


Q ss_pred             cc--CCChHHHHHHHHHHHHHHHHHHHHhhcCCCCCcccccCCHHHHHHHHHHHHHHHHHHH
Q 018398          286 SK--YSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISY  345 (356)
Q Consensus       286 ~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lgi~~s~l~~  345 (356)
                      .+  ...-...++|..+.+..+++.+.++++++....--...+.....+++..|+...+++|
T Consensus       178 i~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy  239 (309)
T COG5070         178 IKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISY  239 (309)
T ss_pred             hcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhh
Confidence            43  3345678899999999999999999887753211234455555666666655555554

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=97.79  E-value=0.0018  Score=58.63  Aligned_cols=128  Identities=14%  Similarity=0.127  Sum_probs=103.1

Q ss_pred             HHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHhCCCC---C-CChHHHHHHHHHHHHHHHHHHHHHHH
Q 018398          122 VSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKL---P-SGFNAWVSIFLFALVDASCFQGFLAQ  197 (356)
Q Consensus       122 l~aa~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~---~-~~~~~~~~~~~~g~~~~~~~~~~~~~  197 (356)
                      +.-++-|+..+.+-|..  ++++.+-...-...-..+.+.+.+......   . .....+..+...|.+. ++...++..
T Consensus       154 l~la~sf~~Ygl~RK~~--~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~aG~vT-avpL~lf~~  230 (293)
T COG2962         154 LALALSFGLYGLLRKKL--KVDALTGLTLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLLVLAGLVT-AVPLLLFAA  230 (293)
T ss_pred             HHHHHHHHHHHHHHHhc--CCchHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHhhHHH-HHHHHHHHH
Confidence            44456677777666653  477887777777777777666666654332   1 3457778888888887 889999999


Q ss_pred             HhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccC
Q 018398          198 GLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA  252 (356)
Q Consensus       198 al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~  252 (356)
                      |-++++.+...++.+.+|.+..+++.+++||+++.-|.++-+.+-+|+++...++
T Consensus       231 aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~  285 (293)
T COG2962         231 AAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDG  285 (293)
T ss_pred             HHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999998887643

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=97.77  E-value=8e-05  Score=58.27  Aligned_cols=110  Identities=15%  Similarity=0.011  Sum_probs=78.6

Q ss_pred             HHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 018398          122 VSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQR  201 (356)
Q Consensus       122 l~aa~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~  201 (356)
                      ++.+++||+..++.|....+.++..-.. |.......    .          .+.+. +. .+++..-.+...|++.+..
T Consensus         2 l~Vg~~WG~Tnpfik~g~~~~~~~~~~~-~~~~~~~~----L----------l~n~~-y~-ipf~lNq~GSv~f~~~L~~   64 (113)
T PF10639_consen    2 LLVGILWGCTNPFIKRGSSGLEKVKASL-QLLQEIKF----L----------LLNPK-YI-IPFLLNQSGSVLFFLLLGS   64 (113)
T ss_pred             eeehHHhcCchHHHHHHHhhcCCccchH-HHHHHHHH----H----------HHhHH-HH-HHHHHHHHHHHHHHHHHhc
Confidence            4567899999999998887654333221 32211111    0          11122 22 2343345566889999999


Q ss_pred             cChhHHHHH-HhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHh
Q 018398          202 TSAGLGSVI-IDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLL  248 (356)
Q Consensus       202 ~~~~~a~~i-~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll  248 (356)
                      .+.+.+..+ +.+.=+++++.++++.+|..++..++|++++++|+.+.
T Consensus        65 ~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   65 ADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             CCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            999999977 79999999999988888888999999999999998764

Many members are annotated as potential transmembrane proteins.

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=97.67  E-value=0.00063  Score=63.35  Aligned_cols=141  Identities=11%  Similarity=0.053  Sum_probs=108.9

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhhccC----CCHHHHHHHHHHHHHHHHHHHHH----HhCCCCC-CChHHHHHHHH
Q 018398          112 LGMLLEWAVLVSPFFFWGTAMVAMKEVLPK----AGTFFVAAFRLIPAGLLLITFAS----SQGRKLP-SGFNAWVSIFL  182 (356)
Q Consensus       112 ~~~~~g~l~ll~aa~~~~~~~~~~k~~~~~----~~p~~~~~~r~~~~~l~~~~~~~----~~~~~~~-~~~~~~~~~~~  182 (356)
                      .+...|.++.++++++||+..++.|.-.++    ++--.+..+--++..++++|..+    ....+++ +...+...+++
T Consensus       243 ~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~  322 (416)
T KOG2765|consen  243 SRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVF  322 (416)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeH
Confidence            455889999999999999999999876543    44222222222344444554333    2223332 23356677788


Q ss_pred             HHHHHHHHHHHHHHHHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccC
Q 018398          183 FALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA  252 (356)
Q Consensus       183 ~g~~~~~~~~~~~~~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~  252 (356)
                      .++++.+++-+++.+|.-.+++..+++-+.++.-+.++...++-+.++++..++|.+.+++|-+++...+
T Consensus       323 ~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~  392 (416)
T KOG2765|consen  323 NNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISS  392 (416)
T ss_pred             hhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccc
Confidence            8999999999999999999999999999999999999999988899999999999999999999998866

>TIGR00688 rarD rarD protein

Probab=97.64  E-value=0.0015  Score=59.21  Aligned_cols=103  Identities=12%  Similarity=0.041  Sum_probs=68.7

Q ss_pred             HHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHhCCC---CCCChHHHHHHHHHHHHHHHHHHHHHH
Q 018398          120 VLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRK---LPSGFNAWVSIFLFALVDASCFQGFLA  196 (356)
Q Consensus       120 ~ll~aa~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~  196 (356)
                      ..++++++|+...+..|...+. +......... ....+..+........   .....++|..++..|++ ...+|.+++
T Consensus       150 ~~l~aa~~~a~~~i~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~-t~i~~~l~~  226 (256)
T TIGR00688       150 EALVLAFSFTAYGLIRKALKNT-DLAGFCLETL-SLMPVAIYYLLQTDFATVQQTNPFPIWLLLVLAGLI-TGTPLLAFV  226 (256)
T ss_pred             HHHHHHHHHHHHHHHHhhcCCC-CcchHHHHHH-HHHHHHHHHHHHhccCcccccCchhHHHHHHHHHHH-HHHHHHHHH
Confidence            4678899999999998876542 3322222221 1111111111111111   11122478888888877 588999999


Q ss_pred             HHhhccChhHHHHHHhhHHHHHHHHHHHH
Q 018398          197 QGLQRTSAGLGSVIIDSQPLSVAVLAALL  225 (356)
Q Consensus       197 ~al~~~~~~~a~~i~~l~pv~~~il~~~~  225 (356)
                      +++++.+++.++++.+++|+++.+++.++
T Consensus       227 ~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       227 IAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.60  E-value=0.00079  Score=51.20  Aligned_cols=58  Identities=22%  Similarity=0.268  Sum_probs=36.2

Q ss_pred             HHHHHHHHHHHHHHHhhccChhHHHHH-HhhHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Q 018398          184 ALVDASCFQGFLAQGLQRTSAGLGSVI-IDSQPLSVAVLAALLFGESIGLVGAGGLVLG  241 (356)
Q Consensus       184 g~~~~~~~~~~~~~al~~~~~~~a~~i-~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~  241 (356)
                      .+.+++.+++++..++++.|.+.+..+ ..+..+.+.+++.+++||++++.+++|+.++
T Consensus        35 ~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   35 AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            444567788999999999999999755 6799999999999999999999999998764

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=97.53  E-value=0.00016  Score=57.37  Aligned_cols=79  Identities=27%  Similarity=0.470  Sum_probs=66.1

Q ss_pred             HHHHHHHHHHhhhccCCChHHHHHHHHHHHHHHHHHHHHhhcCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 018398          273 QSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSA  352 (356)
Q Consensus       273 ~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lgi~~s~l~~~l~~~al  352 (356)
                      ++||.+.+..|+..++.|+...+++..+.+.+ .++.....+...    ....+...+...++++++++++++.++++++
T Consensus         1 ~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~   75 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKISPLSITFWRFLIAGI-LLILLLILGRKP----FKNLSPRQWLWLLFLGLLGTALAYLLYFYAL   75 (126)
T ss_pred             ceeeeHHHHHHHHhccCCHHHHHHHHHHHHHH-HHHHHHhhcccc----ccCCChhhhhhhhHhhccceehHHHHHHHHH
Confidence            46899999999999999999999999999998 666666654432    2456777888899999999999999999999


Q ss_pred             ccCC
Q 018398          353 TKGK  356 (356)
Q Consensus       353 ~~~g  356 (356)
                      ++.+
T Consensus        76 ~~~~   79 (126)
T PF00892_consen   76 KYIS   79 (126)
T ss_pred             Hhcc
Confidence            9864

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=97.46  E-value=0.00065  Score=62.12  Aligned_cols=125  Identities=18%  Similarity=0.202  Sum_probs=95.5

Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHH
Q 018398          109 VMELGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDA  188 (356)
Q Consensus       109 ~~~~~~~~g~l~ll~aa~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  188 (356)
                      .|..+...|.++.+.+.++.|..+.+.|+...+...   ...|.             .+.+.+.. ++  ..++.|.+..
T Consensus        14 ~~~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~---~~~ra-------------~~gg~~yl-~~--~~Ww~G~ltm   74 (335)
T KOG2922|consen   14 RMSSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGA---SGLRA-------------GEGGYGYL-KE--PLWWAGMLTM   74 (335)
T ss_pred             hhccCceeeeeehhhccEEEeeehhhhHHHHHHHhh---hcccc-------------cCCCcchh-hh--HHHHHHHHHH
Confidence            345555678889999999999999999986543221   11111             11222222 22  2344566666


Q ss_pred             HHHHHHHHHHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccC
Q 018398          189 SCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA  252 (356)
Q Consensus       189 ~~~~~~~~~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~  252 (356)
                      ..+-..-|.|+.+.|++..+.+..++.+..++++..+++||++....+|+++|++|-.++....
T Consensus        75 ~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~ha  138 (335)
T KOG2922|consen   75 IVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHA  138 (335)
T ss_pred             HHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEec
Confidence            7778888999999999999999999999999999999999999999999999999999988754

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=97.34  E-value=0.00015  Score=63.77  Aligned_cols=186  Identities=16%  Similarity=0.105  Sum_probs=130.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHHHHHHH
Q 018398          117 EWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLA  196 (356)
Q Consensus       117 g~l~ll~aa~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  196 (356)
                      .+++.++-++.||....+....  +-+|.+.+..-.+.+.++-+.+++.. .+ ..+.+.+..-++-|++. ..++..++
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~--GG~p~qQ~lGtT~GALifaiiv~~~~-~p-~~T~~~~iv~~isG~~W-s~GQ~~Qf   77 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKF--GGKPYQQTLGTTLGALIFAIIVFLFV-SP-ELTLTIFIVGFISGAFW-SFGQANQF   77 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeec--CCChhHhhhhccHHHHHHHHHHheee-cC-ccchhhHHHHHHhhhHh-hhhhhhhh
Confidence            4678899999999876654332  34588887777666666555555442 22 22345555555556655 77889999


Q ss_pred             HHhhccChhHHHHH-HhhHHHHHHHHHHHHhCCCCcHHH----HHHHHHHHHHHHHhhccCC---CCCCCchhhHHHHHH
Q 018398          197 QGLQRTSAGLGSVI-IDSQPLSVAVLAALLFGESIGLVG----AGGLVLGVIGLLLLEAPAF---DESNSSLWGSGEWWM  268 (356)
Q Consensus       197 ~al~~~~~~~a~~i-~~l~pv~~~il~~~~l~e~~~~~~----~~g~~l~~~Gv~ll~~~~~---~~~~~~~~~~G~lla  268 (356)
                      .|+++.+++.+..+ +..+-+-+-+++.+.++|-.+..+    .+++++.++|+++-...+.   +.++.++..+|....
T Consensus        78 ka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~~~~n~kkgi~~L  157 (288)
T COG4975          78 KAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEENPSNLKKGIVIL  157 (288)
T ss_pred             hheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccccccChHhhhhheeee
Confidence            99999999999877 778888899999999999888776    4567778888888877652   233445567899999


Q ss_pred             HHHHHHHHHHHHHHhhhccCCChHHHHHHHHHHHHHHHHHHH
Q 018398          269 LLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVIS  310 (356)
Q Consensus       269 Llaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~  310 (356)
                      +.+.+.|-.|.+..+.+.  .+-+....- ..+|+++..+..
T Consensus       158 ~iSt~GYv~yvvl~~~f~--v~g~saiLP-qAiGMv~~ali~  196 (288)
T COG4975         158 LISTLGYVGYVVLFQLFD--VDGLSAILP-QAIGMVIGALIL  196 (288)
T ss_pred             eeeccceeeeEeeecccc--ccchhhhhH-HHHHHHHHHHHH
Confidence            999999999999998874  444444332 233444444433

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=97.30  E-value=0.0039  Score=56.66  Aligned_cols=139  Identities=16%  Similarity=0.176  Sum_probs=111.7

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhhhccC--CCHHHHHHHHHHHHHHHHHHHHHHhCCCCC------CChHHHHHHHH
Q 018398          111 ELGMLLEWAVLVSPFFFWGTAMVAMKEVLPK--AGTFFVAAFRLIPAGLLLITFASSQGRKLP------SGFNAWVSIFL  182 (356)
Q Consensus       111 ~~~~~~g~l~ll~aa~~~~~~~~~~k~~~~~--~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~------~~~~~~~~~~~  182 (356)
                      +.+...|++++....++=|......+.+.++  ++++.+++.-.+...+.-.......+...+      ..++.++-+++
T Consensus       167 ~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l  246 (327)
T KOG1581|consen  167 RENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILL  246 (327)
T ss_pred             CCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHH
Confidence            3455789999998888888887777766664  789998888888888887777665554321      22344555666


Q ss_pred             HHHHHHHHHHHHHHHHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhc
Q 018398          183 FALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEA  250 (356)
Q Consensus       183 ~g~~~~~~~~~~~~~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~  250 (356)
                      ++.++ ..++.+.++-++.-++-.-+.|+.+--++.++++.+.++.++++.||+|+.+++.|+.+=..
T Consensus       247 ~s~~g-avGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~  313 (327)
T KOG1581|consen  247 YSTCG-AVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEIL  313 (327)
T ss_pred             HHHhh-hhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHH
Confidence            77777 77889999999999999999999999999999999999999999999999999999876544

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=97.14  E-value=0.0016  Score=60.50  Aligned_cols=136  Identities=16%  Similarity=0.195  Sum_probs=109.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhcc----CCCHHHHHHHHHHHHHHHHH-HHHHHhCCCC-------CCChHHHHHHH
Q 018398          114 MLLEWAVLVSPFFFWGTAMVAMKEVLP----KAGTFFVAAFRLIPAGLLLI-TFASSQGRKL-------PSGFNAWVSIF  181 (356)
Q Consensus       114 ~~~g~l~ll~aa~~~~~~~~~~k~~~~----~~~p~~~~~~r~~~~~l~~~-~~~~~~~~~~-------~~~~~~~~~~~  181 (356)
                      .+.|.+.++.+.+..+...++.|....    +++++......--++.+.++ |+....+...       +.... .....
T Consensus       161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~~  239 (316)
T KOG1441|consen  161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLILL  239 (316)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHHH
Confidence            378999999999999999999997773    48899999998889998888 8877754322       11222 33333


Q ss_pred             HHHHHHHHHHHHHHHHHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhcc
Q 018398          182 LFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAP  251 (356)
Q Consensus       182 ~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~  251 (356)
                      +..++. ...+...|..+.++++.+-++.+..=-+++++.+++++++++++.+.+|++++++|+.+-..-
T Consensus       240 ~~sv~~-f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~  308 (316)
T KOG1441|consen  240 LNSVLA-FLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRA  308 (316)
T ss_pred             HHHHHH-HHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHH
Confidence            344444 666788899999999999999998888889999999999999999999999999999887653

>TIGR00803 nst UDP-galactose transporter

Probab=96.93  E-value=0.0062  Score=54.06  Aligned_cols=59  Identities=12%  Similarity=0.015  Sum_probs=54.3

Q ss_pred             HHHHHHHHHHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHH
Q 018398          189 SCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLL  247 (356)
Q Consensus       189 ~~~~~~~~~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~l  247 (356)
                      ..+..+..+.+++.+...-++...+.++++.+++.++++|+++..+++|+.+++.|+.+
T Consensus       163 a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       163 VGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            55567888999999999999999999999999999999999999999999999998754

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.86  E-value=0.052  Score=44.71  Aligned_cols=133  Identities=13%  Similarity=0.077  Sum_probs=88.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhccCCC-HHHHHHHHHHHHHHHHHHHHHHhCCCCCCC--hHHHHHHHHHHHHHHHHHH
Q 018398          116 LEWAVLVSPFFFWGTAMVAMKEVLPKAG-TFFVAAFRLIPAGLLLITFASSQGRKLPSG--FNAWVSIFLFALVDASCFQ  192 (356)
Q Consensus       116 ~g~l~ll~aa~~~~~~~~~~k~~~~~~~-p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~  192 (356)
                      ...+..+.+.++-.....++-.+.+..+ |....++.+..+.+++..+.+...+..+..  .+..++.++-|+++ +.+-
T Consensus         5 l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lG-a~~v   83 (150)
T COG3238           5 LYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLG-AIFV   83 (150)
T ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchh-hhhh
Confidence            4456667777777777666666555555 999999999999888888877744333221  33344555566665 4443


Q ss_pred             HHHHHHhhccChhHHH-HHHhhHHHHHHHHHHHHh----CCCCcHHHHHHHHHHHHHHHHhh
Q 018398          193 GFLAQGLQRTSAGLGS-VIIDSQPLSVAVLAALLF----GESIGLVGAGGLVLGVIGLLLLE  249 (356)
Q Consensus       193 ~~~~~al~~~~~~~a~-~i~~l~pv~~~il~~~~l----~e~~~~~~~~g~~l~~~Gv~ll~  249 (356)
                      ..-........++... ++..-+-+...+++.+=.    +.+++..+++|+++.++|+.++-
T Consensus        84 t~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~  145 (150)
T COG3238          84 TSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR  145 (150)
T ss_pred             hhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence            4444555566555554 456667777777775533    47899999999999999955443

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=96.56  E-value=0.68  Score=43.34  Aligned_cols=169  Identities=12%  Similarity=0.094  Sum_probs=114.7

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHh-C-CCC-----CCChHHHHHHHHHH
Q 018398          112 LGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQ-G-RKL-----PSGFNAWVSIFLFA  184 (356)
Q Consensus       112 ~~~~~g~l~ll~aa~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~-~-~~~-----~~~~~~~~~~~~~g  184 (356)
                      ..-..|+++-.+++++-++.++-.|..- +. .+|....-..+-..+++|+..-. . +..     ..+...+...++.|
T Consensus         3 ~~ii~Gii~h~iGg~~~~sfy~P~kkvk-~W-sWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G   80 (344)
T PF06379_consen    3 SAIILGIIFHAIGGFASGSFYVPFKKVK-GW-SWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFG   80 (344)
T ss_pred             chHHHHHHHHHHHHHHhhhhccchhhcC-Cc-cHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHH
Confidence            3446788889999999999988888753 23 33333333334444444444322 1 111     12335666677788


Q ss_pred             HHHHHHHHHHHHHHhhccChhHHH-HHHhhHHHHHHHHHHHHhC-------CCCcHHHHHHHHHHHHHHHHhhccCC---
Q 018398          185 LVDASCFQGFLAQGLQRTSAGLGS-VIIDSQPLSVAVLAALLFG-------ESIGLVGAGGLVLGVIGLLLLEAPAF---  253 (356)
Q Consensus       185 ~~~~~~~~~~~~~al~~~~~~~a~-~i~~l~pv~~~il~~~~l~-------e~~~~~~~~g~~l~~~Gv~ll~~~~~---  253 (356)
                      ++- .++-..|=.+++|+..+... +...+.-++-.++-.++.+       ++-....++|++++++|+++....+.   
T Consensus        81 ~lW-GIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke  159 (344)
T PF06379_consen   81 VLW-GIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKE  159 (344)
T ss_pred             HHH-hcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhh
Confidence            887 66668889999999998886 4477777777777666644       23355779999999999999987651   


Q ss_pred             ----CCCCCchhhHHHHHHHHHHHHHHHHHHHHh
Q 018398          254 ----DESNSSLWGSGEWWMLLAAQSMAVGTVMVR  283 (356)
Q Consensus       254 ----~~~~~~~~~~G~llaLlaa~~~a~~~v~~r  283 (356)
                          +.....+..+|.++++++++.-++.++-..
T Consensus       160 ~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~  193 (344)
T PF06379_consen  160 KELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLD  193 (344)
T ss_pred             hhhccchhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence                111223456999999999999888888754

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PRK13499 rhamnose-proton symporter; Provisional

Probab=96.53  E-value=0.16  Score=48.00  Aligned_cols=138  Identities=13%  Similarity=0.037  Sum_probs=84.1

Q ss_pred             chhHHHHHHHHHHHHHHHHHH-------HHHhhhc-cCCCHHHHHHHHHH---HHHHH-HHHHHHH---hCCCC-----C
Q 018398          112 LGMLLEWAVLVSPFFFWGTAM-------VAMKEVL-PKAGTFFVAAFRLI---PAGLL-LITFASS---QGRKL-----P  171 (356)
Q Consensus       112 ~~~~~g~l~ll~aa~~~~~~~-------~~~k~~~-~~~~p~~~~~~r~~---~~~l~-~~~~~~~---~~~~~-----~  171 (356)
                      .+..+|++.++++.+.+++..       +..+... .+.++.....-.++   ++.++ -+.++.+   ++++.     +
T Consensus       170 ~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~  249 (345)
T PRK13499        170 FNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADF  249 (345)
T ss_pred             cchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhc
Confidence            344679999999999999887       4444321 24565555555554   33333 3333332   22221     1


Q ss_pred             -CC----hHHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHH---HH-hhHHHHHHHHHHHHhCCCCc------HHHHH
Q 018398          172 -SG----FNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSV---II-DSQPLSVAVLAALLFGESIG------LVGAG  236 (356)
Q Consensus       172 -~~----~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~---i~-~l~pv~~~il~~~~l~e~~~------~~~~~  236 (356)
                       .+    .+.....++.|++- ..++.++.++-...+...+.+   +. .+..++..+.+. ++||+=+      +.-++
T Consensus       250 ~~~~~~~~~n~l~~~l~G~~W-~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~  327 (345)
T PRK13499        250 SLAKPLLITNVLLSALAGVMW-YLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSL  327 (345)
T ss_pred             cccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHH
Confidence             12    12222224445544 666778888888776655554   65 666677777775 6999877      56688


Q ss_pred             HHHHHHHHHHHhhcc
Q 018398          237 GLVLGVIGLLLLEAP  251 (356)
Q Consensus       237 g~~l~~~Gv~ll~~~  251 (356)
                      |+++.++|..++...
T Consensus       328 G~vliI~g~~lig~~  342 (345)
T PRK13499        328 GCVVIILAANIVGLG  342 (345)
T ss_pred             HHHHHHHHHHHHhhc
Confidence            999999998888753

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=96.50  E-value=0.059  Score=48.67  Aligned_cols=166  Identities=14%  Similarity=0.119  Sum_probs=107.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHHHHHHH
Q 018398          117 EWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLA  196 (356)
Q Consensus       117 g~l~ll~aa~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  196 (356)
                      |++..+++.+++|++++-.|.. +.-|++.+-++......+.-+.+...++.+     +-..+.++-|.+- +.++.+..
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~-~~gDg~~fQw~~~~~i~~~g~~v~~~~~~p-----~f~p~amlgG~lW-~~gN~~~v   73 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKF-DTGDGFFFQWVMCSGIFLVGLVVNLILGFP-----PFYPWAMLGGALW-ATGNILVV   73 (254)
T ss_pred             CchhHHHHHHHhcccceeeEec-cCCCcHHHHHHHHHHHHHHHHHHHHhcCCC-----cceeHHHhhhhhh-hcCceeeh
Confidence            4677899999999999999964 446777776666665555555555443321     1122233344444 77889999


Q ss_pred             HHhhccChhHHHHHHhhHHH-HHHHHHHH-HhCCC-----CcHHHHHHHHHHHHHHHHhhccCC----------------
Q 018398          197 QGLQRTSAGLGSVIIDSQPL-SVAVLAAL-LFGES-----IGLVGAGGLVLGVIGLLLLEAPAF----------------  253 (356)
Q Consensus       197 ~al~~~~~~~a~~i~~l~pv-~~~il~~~-~l~e~-----~~~~~~~g~~l~~~Gv~ll~~~~~----------------  253 (356)
                      -.++..+.+.+.++-...-+ ..-..+.+ +++++     -....++|++++++|..+...-..                
T Consensus        74 pii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~~~~~~  153 (254)
T PF07857_consen   74 PIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEETPLSI  153 (254)
T ss_pred             hHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCCCCcccccccccccc
Confidence            99999999999988555433 33333332 33332     356779999999999887765220                


Q ss_pred             C------CC-----CC---------chhhHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 018398          254 D------ES-----NS---------SLWGSGEWWMLLAAQSMAVGTVMVRWVSKYS  289 (356)
Q Consensus       254 ~------~~-----~~---------~~~~~G~llaLlaa~~~a~~~v~~r~~~~~~  289 (356)
                      +      ..     +.         .....|..+++++++.|+...+=..++.++.
T Consensus       154 ~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~~  209 (254)
T PF07857_consen  154 EDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDHP  209 (254)
T ss_pred             ccccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHhCc
Confidence            0      00     00         0245788888888888888877766665443

The region concerned is approximately 280 residues long.

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=96.46  E-value=0.017  Score=50.64  Aligned_cols=137  Identities=12%  Similarity=0.022  Sum_probs=95.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccC--CCHHHHHHHHHHHHHHHHHHHHHHhCCCC------CCChHHHHHHHHHHHH
Q 018398          115 LLEWAVLVSPFFFWGTAMVAMKEVLPK--AGTFFVAAFRLIPAGLLLITFASSQGRKL------PSGFNAWVSIFLFALV  186 (356)
Q Consensus       115 ~~g~l~ll~aa~~~~~~~~~~k~~~~~--~~p~~~~~~r~~~~~l~~~~~~~~~~~~~------~~~~~~~~~~~~~g~~  186 (356)
                      ..|-++++++...=|.........-.+  -+..++++.-.+-..+.+-.-.+..+.-+      ..-...++.+.++++.
T Consensus       171 g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai~  250 (337)
T KOG1580|consen  171 GFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAIA  250 (337)
T ss_pred             chHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHHH
Confidence            456777888887777777665544332  22223333333333333332222222111      0112556667777777


Q ss_pred             HHHHHHHHHHHHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccC
Q 018398          187 DASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA  252 (356)
Q Consensus       187 ~~~~~~~~~~~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~  252 (356)
                      + ++++.|.|.-+.+-++...+++..+--.|+++.+.++++.+++.+||+|.++++.|...=...+
T Consensus       251 s-~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~G  315 (337)
T KOG1580|consen  251 S-CLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDG  315 (337)
T ss_pred             H-HhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcC
Confidence            7 8888999999999999999999999999999999999999999999999999999988766644

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=95.98  E-value=0.07  Score=44.02  Aligned_cols=54  Identities=19%  Similarity=0.191  Sum_probs=47.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcc-------CCChHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 018398          264 GEWWMLLAAQSMAVGTVMVRWVSK-------YSDPVMATGWHMVIGGLPLMVISVLNHDPV  317 (356)
Q Consensus       264 G~llaLlaa~~~a~~~v~~r~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  317 (356)
                      |.++++++.++.+++.++.|+..+       +.++.+...+....+.+++++.+++.|++.
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~   61 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQ   61 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence            678999999999999999987543       468999999999999999999999988765

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=95.61  E-value=0.2  Score=45.08  Aligned_cols=168  Identities=13%  Similarity=0.062  Sum_probs=102.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHhhHHHHHHHHHHH
Q 018398          145 FFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAAL  224 (356)
Q Consensus       145 ~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~l~pv~~~il~~~  224 (356)
                      +.++++++.+-..+.+..+...+.  ++....|+.+..++++. .+.+.+..-++.|++=-.-.++-.+--+=+++.+.+
T Consensus        76 WylTlvQf~~Ysg~glie~~~~~~--k~r~iP~rtY~~la~~t-~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggif  152 (367)
T KOG1582|consen   76 WYLTLVQFLVYSGFGLIELQLIQT--KRRVIPWRTYVILAFLT-VGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIF  152 (367)
T ss_pred             hHHHHHHHHHHHhhhheEEEeecc--cceecchhHhhhhHhhh-hhccccCcCccccccCcHHHHHHhhhhhhhhheeee
Confidence            456666665543333322211111  11223455555555554 444455555566655444445555555556678888


Q ss_pred             HhCCCCcHHHHHHHHHHHHHHHHhhccCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhhhccC--CChHHHHHHHHHHH
Q 018398          225 LFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKY--SDPVMATGWHMVIG  302 (356)
Q Consensus       225 ~l~e~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~G~llaLlaa~~~a~~~v~~r~~~~~--~~~~~~~~~~~~~~  302 (356)
                      +-|.|.++.+.++..+..+|+++....+..-++. ....|..+.=.+-++=|.-.-+.++..+.  .+..+++++...+|
T Consensus       153 IqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPN-F~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG  231 (367)
T KOG1582|consen  153 IQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPN-FNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIG  231 (367)
T ss_pred             eccccccHHHHHHHHHHHHHHHhhhhcccccCCC-cceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeeccc
Confidence            8899999999999999999999999877433322 22357665555555555444444444332  35677888889999


Q ss_pred             HHHHHHHHHhhcCC
Q 018398          303 GLPLMVISVLNHDP  316 (356)
Q Consensus       303 ~i~~~~~~~~~~~~  316 (356)
                      .+..+..+...++.
T Consensus       232 ~vflf~~mvlTge~  245 (367)
T KOG1582|consen  232 FVFLFAPMVLTGEL  245 (367)
T ss_pred             HHHHHHHHHhcccc
Confidence            99988888887654

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=95.06  E-value=0.24  Score=45.68  Aligned_cols=136  Identities=13%  Similarity=0.074  Sum_probs=104.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcc--CCCHHHHHHHHHHHHHHHHHHHHHHhCCCC--------CCChHHHHHHHHHH
Q 018398          115 LLEWAVLVSPFFFWGTAMVAMKEVLP--KAGTFFVAAFRLIPAGLLLITFASSQGRKL--------PSGFNAWVSIFLFA  184 (356)
Q Consensus       115 ~~g~l~ll~aa~~~~~~~~~~k~~~~--~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~--------~~~~~~~~~~~~~g  184 (356)
                      ..|+.+++...+.-+...+..|...+  +.+-+.+.+...++..+.+....+..+...        ......+..+.+-+
T Consensus       156 ~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lSc  235 (314)
T KOG1444|consen  156 LRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSC  235 (314)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHH
Confidence            34788888888888888888888776  366888899999888888887776554311        11124456667777


Q ss_pred             HHHHHHHHHHHHHHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhcc
Q 018398          185 LVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAP  251 (356)
Q Consensus       185 ~~~~~~~~~~~~~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~  251 (356)
                      +++.++ .++.++..+..++..-++.....-..+.+...++.+++.++...+|+.++++|-++-...
T Consensus       236 v~gf~i-sy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~  301 (314)
T KOG1444|consen  236 VMGFGI-SYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYA  301 (314)
T ss_pred             HHHHHH-HHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhh
Confidence            777555 477889999999998888887777777888878889999999999999999997766543

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=94.59  E-value=1.1  Score=40.38  Aligned_cols=128  Identities=17%  Similarity=0.095  Sum_probs=84.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhhccC--CCHHHHHHHHHHHHHHHHHHHHHHhCC-CCC-C-ChHHHHHHHHHHHHH
Q 018398          113 GMLLEWAVLVSPFFFWGTAMVAMKEVLPK--AGTFFVAAFRLIPAGLLLITFASSQGR-KLP-S-GFNAWVSIFLFALVD  187 (356)
Q Consensus       113 ~~~~g~l~ll~aa~~~~~~~~~~k~~~~~--~~p~~~~~~r~~~~~l~~~~~~~~~~~-~~~-~-~~~~~~~~~~~g~~~  187 (356)
                      ....|+++.++++++-|...+...+..++  .+.+.....=+..+.++.++.....+. ... . ..+.+-...+.-++.
T Consensus       111 ~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~f~G~~~~~~~~i~~  190 (244)
T PF04142_consen  111 NPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISESGFFHGYSWWVWIVIFL  190 (244)
T ss_pred             hhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccccCCchhhcchHHHHHHHH
Confidence            44678999999999999999998777765  344444444444555554444433322 111 0 011111112222223


Q ss_pred             HHHHHHHHHHHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHH
Q 018398          188 ASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVL  240 (356)
Q Consensus       188 ~~~~~~~~~~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l  240 (356)
                      .+.+=.+...-+||.+.-.=......+.+++.+++.++++.+++....+|..+
T Consensus       191 ~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~  243 (244)
T PF04142_consen  191 QAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAAL  243 (244)
T ss_pred             HHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheec
Confidence            34343666778999998888889999999999999999999999999888754

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PRK02237 hypothetical protein; Provisional

Probab=93.83  E-value=1  Score=34.71  Aligned_cols=49  Identities=8%  Similarity=-0.062  Sum_probs=39.9

Q ss_pred             cChhHHH-HHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhc
Q 018398          202 TSAGLGS-VIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEA  250 (356)
Q Consensus       202 ~~~~~a~-~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~  250 (356)
                      ...+.+. .-.....+...+..+.+-|+|+++.+++|..+|++|+.++..
T Consensus        56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~  105 (109)
T PRK02237         56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY  105 (109)
T ss_pred             hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence            3345553 446677788889999999999999999999999999988864

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=93.70  E-value=0.58  Score=41.01  Aligned_cols=132  Identities=12%  Similarity=0.160  Sum_probs=95.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcc--CCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCC------ChHHHHHHHHHHHHHH
Q 018398          117 EWAVLVSPFFFWGTAMVAMKEVLP--KAGTFFVAAFRLIPAGLLLITFASSQGRKLPS------GFNAWVSIFLFALVDA  188 (356)
Q Consensus       117 g~l~ll~aa~~~~~~~~~~k~~~~--~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~  188 (356)
                      |++.+..-.+--+..-..+|...+  +..-+..+++..+++..+++.+.+..+.+.+.      +.....+.++.|++..
T Consensus       156 GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~sv  235 (309)
T COG5070         156 GYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSV  235 (309)
T ss_pred             ceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHh
Confidence            454444444444444445555443  35577888999999999888887776654332      2234556777777775


Q ss_pred             HHHHHHHHHHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhh
Q 018398          189 SCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLE  249 (356)
Q Consensus       189 ~~~~~~~~~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~  249 (356)
                      +.. ++..+.++-++.+.-+++..+.-.-.++-+.++++|+.+...+..++++++..++-.
T Consensus       236 giS-y~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYa  295 (309)
T COG5070         236 GIS-YCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYA  295 (309)
T ss_pred             hhh-hccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHH
Confidence            554 677899999999999999999999999999999999999999988888776554443

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=93.35  E-value=0.011  Score=52.22  Aligned_cols=128  Identities=13%  Similarity=0.057  Sum_probs=83.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhh-ccCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHHHH
Q 018398          115 LLEWAVLVSPFFFWGTAMVAMKEV-LPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQG  193 (356)
Q Consensus       115 ~~g~l~ll~aa~~~~~~~~~~k~~-~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  193 (356)
                      .+|+..++.+.+-|-..-++.+.. .+..+...-.++-++++++.+-    +.+.. +...+..+.-++.|+.- +.++.
T Consensus       151 kkgi~~L~iSt~GYv~yvvl~~~f~v~g~saiLPqAiGMv~~ali~~----~~~~~-~~~~K~t~~nii~G~~W-a~GNl  224 (288)
T COG4975         151 KKGIVILLISTLGYVGYVVLFQLFDVDGLSAILPQAIGMVIGALILG----FFKME-KRFNKYTWLNIIPGLIW-AIGNL  224 (288)
T ss_pred             hhheeeeeeeccceeeeEeeeccccccchhhhhHHHHHHHHHHHHHh----hcccc-cchHHHHHHHHhhHHHH-HhhHH
Confidence            456666666766655444444422 2334444444444444444332    22222 22335556667778877 78889


Q ss_pred             HHHHHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHH----HHHHHHHHHHHh
Q 018398          194 FLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAG----GLVLGVIGLLLL  248 (356)
Q Consensus       194 ~~~~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~----g~~l~~~Gv~ll  248 (356)
                      ++++|-+....+.+-.+..+..++..+-+.+++|||-+++++.    |+++.++|..++
T Consensus       225 ~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~l  283 (288)
T COG4975         225 FMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILL  283 (288)
T ss_pred             HHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhh
Confidence            9999999999998888999999999999999999999999965    455555555444

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=93.29  E-value=1.8  Score=39.85  Aligned_cols=133  Identities=14%  Similarity=0.033  Sum_probs=82.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccCC-----CHHHHHHHHHHHHHHHHHHHHHHhCCCCC---------C----ChHH
Q 018398          115 LLEWAVLVSPFFFWGTAMVAMKEVLPKA-----GTFFVAAFRLIPAGLLLITFASSQGRKLP---------S----GFNA  176 (356)
Q Consensus       115 ~~g~l~ll~aa~~~~~~~~~~k~~~~~~-----~p~~~~~~r~~~~~l~~~~~~~~~~~~~~---------~----~~~~  176 (356)
                      ..|..+...+.++-|.-+...+.+..+-     +|....+--.-...+.++|..+..++..+         .    ..+.
T Consensus       163 i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv  242 (349)
T KOG1443|consen  163 IEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRV  242 (349)
T ss_pred             ehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHH
Confidence            5678888888888888887777666532     24443332222233333333333332211         1    1122


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHh
Q 018398          177 WVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLL  248 (356)
Q Consensus       177 ~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll  248 (356)
                      ...+.+.|.... +--.+.+.=+..++.-..++..-.-=+.+.+++.++++++++...|+|..++..|+.+=
T Consensus       243 ~g~i~l~g~laF-~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~  313 (349)
T KOG1443|consen  243 IGLISLGGLLAF-LLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH  313 (349)
T ss_pred             HHHHHHHHHHHH-HHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence            333333333332 22234455566777777777776777889999999999999999999999999999887

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=93.06  E-value=1  Score=34.51  Aligned_cols=112  Identities=16%  Similarity=0.118  Sum_probs=75.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhhccCCC------HHHHHHHHHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHHH
Q 018398          119 AVLVSPFFFWGTAMVAMKEVLPKAG------TFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQ  192 (356)
Q Consensus       119 l~ll~aa~~~~~~~~~~k~~~~~~~------p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  192 (356)
                      .-++..+++||...++.|......+      .....+.|-......              .    +.+.+.-.++.+. .
T Consensus         6 ~~lvaVgllWG~Tnplirrgs~g~~~v~~~~~k~~~~lqe~~tl~l--------------~----w~Y~iPFllNqcg-S   66 (125)
T KOG4831|consen    6 DKLVAVGLLWGATNPLIRRGSLGWDKVKSSSRKIMIALQEMKTLFL--------------N----WEYLIPFLLNQCG-S   66 (125)
T ss_pred             HHHHHHHHHHccccHHHHHHHhhHhhccCchHHHHHHHHHHHHHHH--------------h----HHHHHHHHHHHhh-H
Confidence            3467888999999999997665322      223333333221111              1    1222333444343 4


Q ss_pred             HHHHHHhhccChhHHHHH-HhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhh
Q 018398          193 GFLAQGLQRTSAGLGSVI-IDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLE  249 (356)
Q Consensus       193 ~~~~~al~~~~~~~a~~i-~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~  249 (356)
                      .+||.-+++++.+.+.-+ +.+.-.|+.+.+..+..|....+.++|..+.++|+.+..
T Consensus        67 aly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci  124 (125)
T KOG4831|consen   67 ALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI  124 (125)
T ss_pred             HHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence            788999999999999855 888999999999766556677888999999999987643

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=92.07  E-value=1.7  Score=39.28  Aligned_cols=110  Identities=15%  Similarity=0.101  Sum_probs=81.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHhCCCC-------CCChHHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHhhH
Q 018398          142 AGTFFVAAFRLIPAGLLLITFASSQGRKL-------PSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQ  214 (356)
Q Consensus       142 ~~p~~~~~~r~~~~~l~~~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~l~  214 (356)
                      -+..++.+..+.++...++..+...+.-.       ..+.+.....++.+..+ .++..+..--++.-++..++.+...-
T Consensus       218 ~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~~g-ylG~~~VLalI~~fGA~~aatvTTaR  296 (367)
T KOG1582|consen  218 ASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSLAG-YLGIVFVLALIKLFGALIAATVTTAR  296 (367)
T ss_pred             CCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHHHh-HhhHHHHHHHHHHhchhHHHHHHHhH
Confidence            44678888888888888877776654322       22344555555555555 34434444445567888888888889


Q ss_pred             HHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccC
Q 018398          215 PLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA  252 (356)
Q Consensus       215 pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~  252 (356)
                      =.++++++++++-++++....-+..+++.|+++-..+.
T Consensus       297 KavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk  334 (367)
T KOG1582|consen  297 KAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK  334 (367)
T ss_pred             hHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence            99999999999999999999999999999999988876

>TIGR00803 nst UDP-galactose transporter

Probab=91.93  E-value=2.1  Score=37.77  Aligned_cols=82  Identities=15%  Similarity=-0.027  Sum_probs=51.1

Q ss_pred             HHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccCC-----------------CC-----CCCchhhHHH
Q 018398          208 SVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAF-----------------DE-----SNSSLWGSGE  265 (356)
Q Consensus       208 ~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~~-----------------~~-----~~~~~~~~G~  265 (356)
                      .......++++++..+.+.++|++..++++.++...|+......+.                 +.     ....+...|.
T Consensus         8 ~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g~~~~g~   87 (222)
T TIGR00803         8 IIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFGNPVVGL   87 (222)
T ss_pred             HHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccccHHHHH
Confidence            4456667777777777777888777788887777777664222110                 01     0112344566


Q ss_pred             HHHHHHHHHHHHHHHHHhhhccCC
Q 018398          266 WWMLLAAQSMAVGTVMVRWVSKYS  289 (356)
Q Consensus       266 llaLlaa~~~a~~~v~~r~~~~~~  289 (356)
                      ...+.+..+-+...++.++..++.
T Consensus        88 ~~~l~a~~~~~~~~~y~e~~~k~~  111 (222)
T TIGR00803        88 SAVLSALLSSGFAGVYFEKILKDG  111 (222)
T ss_pred             HHHHHHHHHHhhhHHHHHHcccCC
Confidence            667777777677777777765543

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=91.71  E-value=1.5  Score=33.70  Aligned_cols=55  Identities=13%  Similarity=-0.004  Sum_probs=44.1

Q ss_pred             HHhhccChhHHH-HHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhcc
Q 018398          197 QGLQRTSAGLGS-VIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAP  251 (356)
Q Consensus       197 ~al~~~~~~~a~-~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~  251 (356)
                      ..++-.+.+.+. .-.....+...+..+.+-|+++++.+++|..+|++|+.++...
T Consensus        49 ~Tl~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~  104 (107)
T PF02694_consen   49 LTLQPAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA  104 (107)
T ss_pred             hhcCcccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence            334445555553 4467788888999999999999999999999999999998763

; GO: 0016020 membrane

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=91.46  E-value=0.9  Score=41.17  Aligned_cols=157  Identities=12%  Similarity=0.021  Sum_probs=96.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhC-CCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ChhHHHHHHhhHHHHHHHHH
Q 018398          145 FFVAAFRLIPAGLLLITFASSQG-RKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRT-SAGLGSVIIDSQPLSVAVLA  222 (356)
Q Consensus       145 ~~~~~~r~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~-~~~~a~~i~~l~pv~~~il~  222 (356)
                      -.+++.++++.+.--+++.-... .+.+.+.+++.....    ..+..+.+-.+|+++- +.-.=.++..-.++.+++++
T Consensus        34 NLITFaqFlFia~eGlif~skf~~~k~kiplk~Y~i~V~----mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g  109 (330)
T KOG1583|consen   34 NLITFAQFLFIATEGLIFTSKFFTVKPKIPLKDYAITVA----MFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILG  109 (330)
T ss_pred             eehHHHHHHHHHHhceeeeccccccCCCCchhhhheehh----eeeeeeeeccceeeecccceEEEEEecCcHHHHHHHH
Confidence            45677777766666655542111 112223344332222    2234456667888873 44334456888999999999


Q ss_pred             HHHhCCCCcHHHHHHHHHHHHHHHHhhccCCC-----------C---CCCchhhHHHHHHHHHHHHHHHHHHH----Hhh
Q 018398          223 ALLFGESIGLVGAGGLVLGVIGLLLLEAPAFD-----------E---SNSSLWGSGEWWMLLAAQSMAVGTVM----VRW  284 (356)
Q Consensus       223 ~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~~~-----------~---~~~~~~~~G~llaLlaa~~~a~~~v~----~r~  284 (356)
                      ++++|+|.+.+|+..+++.-+|+++-...+..           +   .+...+..|..+...+-+.-|.-.++    .||
T Consensus       110 ~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~k  189 (330)
T KOG1583|consen  110 WILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQK  189 (330)
T ss_pred             HHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999988764411           1   11123456665544444444444444    344


Q ss_pred             hccCCChHHHHHHHHHHHHHHHH
Q 018398          285 VSKYSDPVMATGWHMVIGGLPLM  307 (356)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~i~~~  307 (356)
                      ..+  |+-+.++|.-+......+
T Consensus       190 yGK--h~~EalFytH~LsLP~Fl  210 (330)
T KOG1583|consen  190 YGK--HWKEALFYTHFLSLPLFL  210 (330)
T ss_pred             hcC--ChHHHHHHHHHhccchHH
Confidence            433  688888888877655433

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=89.55  E-value=0.46  Score=42.97  Aligned_cols=135  Identities=17%  Similarity=0.169  Sum_probs=91.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhccCCC--HHHHHHHHHHHHHHHHHHHHHHhCC-----CCC--CChHHHHHHHHHH
Q 018398          114 MLLEWAVLVSPFFFWGTAMVAMKEVLPKAG--TFFVAAFRLIPAGLLLITFASSQGR-----KLP--SGFNAWVSIFLFA  184 (356)
Q Consensus       114 ~~~g~l~ll~aa~~~~~~~~~~k~~~~~~~--p~~~~~~r~~~~~l~~~~~~~~~~~-----~~~--~~~~~~~~~~~~g  184 (356)
                      .+.|.++.+++.+.-+.+.+.+|.....++  -+.+++++.+.+.++++|.....+.     ..+  +..+-|..+.+-|
T Consensus       183 s~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsg  262 (347)
T KOG1442|consen  183 SWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSG  262 (347)
T ss_pred             chhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHH
Confidence            367999999999999999999997766544  7789999999999999999887653     111  2345556666667


Q ss_pred             HHHHHHHHHHHHHHhhccChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhh
Q 018398          185 LVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLE  249 (356)
Q Consensus       185 ~~~~~~~~~~~~~al~~~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~  249 (356)
                      +++..++|. ..+=++.+++.+-.+=..--...-.+++..+++|.-+...|-+-++++.|-..-.
T Consensus       263 lfgF~mgyv-Tg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT  326 (347)
T KOG1442|consen  263 LFGFAMGYV-TGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYT  326 (347)
T ss_pred             HHHHHhhhe-eeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHH
Confidence            777555532 2333444444332222222233345677788999988888888777777655444

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=89.00  E-value=2.7  Score=34.27  Aligned_cols=86  Identities=15%  Similarity=0.113  Sum_probs=59.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhccCCC-hHHHHHHHHHHHHHHHHHHHHhhcCCCCCcccccCCHHHHHHHHHHHHHHHHH
Q 018398          265 EWWMLLAAQSMAVGTVMVRWVSKYSD-PVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAI  343 (356)
Q Consensus       265 ~llaLlaa~~~a~~~v~~r~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lgi~~s~l  343 (356)
                      .+++++++++-++...+..++.++.+ ++.........+.+.+.++.++.+++... .....   .|+  .|+|.+..++
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~-~~~~~---p~w--~~lGG~lG~~   76 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSLA-SLSSV---PWW--AYLGGLLGVF   76 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccc-hhccC---ChH--HhccHHHHHH
Confidence            57889999999999999999888876 99999999999999999888887765221 11111   122  2224344445


Q ss_pred             HHHHHHHHhccCC
Q 018398          344 SYGVYFYSATKGK  356 (356)
Q Consensus       344 ~~~l~~~al~~~g  356 (356)
                      -..+..+.++|.|
T Consensus        77 ~V~~~~~~vp~lG   89 (138)
T PF04657_consen   77 FVLSNIILVPRLG   89 (138)
T ss_pred             HHHHHHHHhhhhh
Confidence            5555556555543

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=87.62  E-value=2.3  Score=38.46  Aligned_cols=59  Identities=7%  Similarity=0.091  Sum_probs=41.9

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhhhccCC--------CHH----HHHHHHHHHHHHHHHHHHHHhCCC
Q 018398          111 ELGMLLEWAVLVSPFFFWGTAMVAMKEVLPKA--------GTF----FVAAFRLIPAGLLLITFASSQGRK  169 (356)
Q Consensus       111 ~~~~~~g~l~ll~aa~~~~~~~~~~k~~~~~~--------~p~----~~~~~r~~~~~l~~~~~~~~~~~~  169 (356)
                      .+++..|.++.+++.+++|.+++-.++..++-        .++    .....-++.+.+.++.++..+|.+
T Consensus       178 ~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~~~~y~~as~~~ldYvFs~f~GIfltSt~~F~~Y~~~~rn~  248 (254)
T PF07857_consen  178 RKKRIVGIILAVFAGVLYGSNFVPVIYIQDHPDIYPGASQNGLDYVFSHFSGIFLTSTVYFVIYCIIKRNK  248 (254)
T ss_pred             ccchhHhHHHHHHHHHHHhcccchHHHHHhCccccCCCCCcchheeHHHHhhHHHHHHHHHHHHHHhhcCC
Confidence            34568899999999999999999988887654        222    333344556666777777776654

The region concerned is approximately 280 residues long.

>COG1742 Uncharacterized conserved protein [Function unknown]

Probab=86.42  E-value=5.5  Score=30.48  Aligned_cols=43  Identities=7%  Similarity=-0.118  Sum_probs=36.1

Q ss_pred             HHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccC
Q 018398          210 IIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA  252 (356)
Q Consensus       210 i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~  252 (356)
                      -.....+...+..+++-|.++++.+|+|.++|++|+.++...+
T Consensus        64 YGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~p  106 (109)
T COG1742          64 YGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGP  106 (109)
T ss_pred             hcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCC
Confidence            3556677778888888899999999999999999998887643

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=85.86  E-value=7.9  Score=35.28  Aligned_cols=132  Identities=15%  Similarity=0.138  Sum_probs=82.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccC--CCHHHHHHHHHHHHHHHHHHHHH--------HhCCC---CC----CChHHH
Q 018398          115 LLEWAVLVSPFFFWGTAMVAMKEVLPK--AGTFFVAAFRLIPAGLLLITFAS--------SQGRK---LP----SGFNAW  177 (356)
Q Consensus       115 ~~g~l~ll~aa~~~~~~~~~~k~~~~~--~~p~~~~~~r~~~~~l~~~~~~~--------~~~~~---~~----~~~~~~  177 (356)
                      ..|+.++.++.+.-+.+.+......+.  =++-+.+++--.+....++...-        ....+   .+    ..+..|
T Consensus       163 ~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~  242 (330)
T KOG1583|consen  163 LIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMW  242 (330)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHH
Confidence            467777777777766666665555543  45888888888776655543321        00111   01    112333


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhc----cChhHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhcc
Q 018398          178 VSIFLFALVDASCFQGFLAQGLQR----TSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAP  251 (356)
Q Consensus       178 ~~~~~~g~~~~~~~~~~~~~al~~----~~~~~a~~i~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~  251 (356)
                      ..++.-     ++.+++-..++..    +++.+.+++..+-=.+..+++.+.++.++++..|+|.++++.|..+....
T Consensus       243 ~yLl~n-----~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~  315 (330)
T KOG1583|consen  243 VYLLFN-----VLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANV  315 (330)
T ss_pred             HHHHHH-----HHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            333322     2222332333322    45555667777888899999999999999999999999999999887653

>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function

Probab=81.84  E-value=22  Score=27.44  Aligned_cols=51  Identities=14%  Similarity=0.077  Sum_probs=34.3

Q ss_pred             HhhccChhHHHHH-HhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHh
Q 018398          198 GLQRTSAGLGSVI-IDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLL  248 (356)
Q Consensus       198 al~~~~~~~a~~i-~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll  248 (356)
                      +.+..+..+--++ -..+-.+-++++.+++||++++....|.++.++++..+
T Consensus        55 G~~~~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~fi  106 (108)
T PF04342_consen   55 GYQTFSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYFI  106 (108)
T ss_pred             hccccCHHHHHHHHHHHhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence            3444455555444 22233334566778999999999999999888887654

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=81.67  E-value=9  Score=30.85  Aligned_cols=72  Identities=13%  Similarity=0.119  Sum_probs=46.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhccCCChHHHHHHHHHHHHHHHHHHHHhhcCCCCCcccccCCHHHHHHHHHHHHHHHH
Q 018398          263 SGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSA  342 (356)
Q Consensus       263 ~G~llaLlaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lgi~~s~  342 (356)
                      +|+++.+++.++-+...++.|+-.++.+....... .    . ......             .+   ....+++|+++.+
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~-~----~-~~~~~~-------------~~---p~~~i~lgl~~~~   59 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHAWD-F----I-AALLAF-------------GL---ALRAVLLGLAGYA   59 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccchhH-H----H-HHHHHH-------------hc---cHHHHHHHHHHHH
Confidence            37889999999999999999987666543332111 0    0 000000             00   1225778889999


Q ss_pred             HHHHHHHHHhccCC
Q 018398          343 ISYGVYFYSATKGK  356 (356)
Q Consensus       343 l~~~l~~~al~~~g  356 (356)
                      ++|.+|++++++.+
T Consensus        60 la~~~w~~aL~~~~   73 (129)
T PRK02971         60 LSMLCWLKALRYLP   73 (129)
T ss_pred             HHHHHHHHHHHhCC
Confidence            99999999998864

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	356
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.99
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.92

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.99  E-value=1.5e-08  Score=78.70  Aligned_cols=102  Identities=18%  Similarity=0.170  Sum_probs=84.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHHHHHHH
Q 018398          117 EWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLA  196 (356)
Q Consensus       117 g~l~ll~aa~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  196 (356)
                      .+++++++.++-.......|...+ ..                               +.+.  .+.+.++++.++.++.
T Consensus         3 ~~l~l~~a~~~e~~~~~~lK~s~~-~~-------------------------------~~~~--~~~~~~~~~~~~~~~~   48 (110)
T 3b5d_A            3 PYIYLGGAILAEVIGTTLMKFSEG-FT-------------------------------RLWP--SVGTIICYCASFWLLA   48 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccC-cc-------------------------------hHHH--HHHHHHHHHHHHHHHH
Confidence            467778888888888888887421 10                               1122  2466777788999999


Q ss_pred             HHhhccChhHHHHH-HhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccC
Q 018398          197 QGLQRTSAGLGSVI-IDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA  252 (356)
Q Consensus       197 ~al~~~~~~~a~~i-~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~  252 (356)
                      +++++.|.+.+..+ ..+.|+++++++++++||++++.+++|++++++|++++...+
T Consensus        49 ~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           49 QTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            99999999999888 899999999999999999999999999999999999997744

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.92  E-value=3e-09  Score=85.73  Aligned_cols=102  Identities=18%  Similarity=0.163  Sum_probs=68.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHHHHHHH
Q 018398          117 EWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLA  196 (356)
Q Consensus       117 g~l~ll~aa~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  196 (356)
                      .+++++++.++-.......|.... .       .                        +.+  ..+.++++++++++++.
T Consensus         3 ~~l~Ll~ail~ev~~~~~lK~s~g-~-------~------------------------~~~--~~~l~i~~~~ls~~l~~   48 (137)
T 2i68_A            3 PYIYLGGAILAEVIGTTLMKFSEG-F-------T------------------------RLW--PSVGTIICYCASFWLLA   48 (137)
T ss_dssp             -CHHHHHHHHHHHHHHHHC----------------------------------------------CHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcc-c-------c------------------------hHH--HHHHHHHHHHHHHHHHH
Confidence            356677777777777777776320 0       0                        011  12567777889999999


Q ss_pred             HHhhccChhHHHHH-HhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccC
Q 018398          197 QGLQRTSAGLGSVI-IDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA  252 (356)
Q Consensus       197 ~al~~~~~~~a~~i-~~l~pv~~~il~~~~l~e~~~~~~~~g~~l~~~Gv~ll~~~~  252 (356)
                      +++++.+++.+..+ .++.|+++++++++++||++++.+++|++++++|++++...+
T Consensus        49 ~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           49 QTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            99999999999988 899999999999999999999999999999999999998754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00