Citrus Sinensis ID: 018509

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-----
Protein Sequence
MMSPRPNSDDRGSSNFRHTPLQILHIIASFLRIWSVYSMYRYLSQTGVSVILFIFCCLVPSSILFLLLQKPWKGRPLLNTQMVPSVINGGITALYFILWGKGLKSCGPVRALLAEYSGAVLGVLSAVLYGRRGHVWKKVGGLIAILASFYFLSQGWATETSSPFSFKDSLDAELRTEQVLGMKEMVVPLLAGILSALRRVIARRVSLKITLKRRLHAITITSATCFLFPVAMWDLIIGSKSSSSVDLPFSAWAFLSTTLFGIILIFYVDAMAEERLHMVFSSPRHLMVAGGCIIVMEMVYKMDFSLIGFIICSLILGFGIYEATSLDHGRKDTFQKPDLSNGMLGDELQVSSLPT
Secondary Structure (PSIPRED)
cccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHEEHEEHHHHHHHHHEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccHcHHcccccccccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHEccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mmsprpnsddrgssnfrhtpLQILHIIASFLRIWSVYSMYRYLSQTGVSVILFIFCCLVpssilflllqkpwkgrpllntqmvpsvingGITALYFILWgkglkscgPVRALLAEYSGAVLGVLSAVLYGRRGHVWKKVGGLIAILASFYFlsqgwatetsspfsfkdslDAELRTEQVLGMKEMVVPLLAGILSALRRVIARRVSLKITLKRRLHAITITSATCFLFPVAMWDLiigskssssvdlpfsawAFLSTTLFGIILIFYVDAMAEERLHMvfssprhlmvAGGCIIVMEMVYKMDFSLIGFIICSLILGFgiyeatsldhgrkdtfqkpdlsngmlgdelqvsslpt
Flexible Loop (DISEMBL)
mmsprpnsddrgssnfrhTPLQILHIIASFLRIWSVYSMYRYLSQTGVSVILFIFCCLVPSSILFLLLQKPWKGRPLLNTQMVPSVINGGITALYFILWGKGLKSCGPVRALLAEYSGAVLGVLSAVLYGRRGHVWKKVGGLIAILASFYFLSQGWATETsspfsfkdsLDAELRTEQVLGMKEMVVPLLAGILSALRRVIARRVSLkitlkrrlhAITITSATCFLFPVAMWDLIIGSKSSSSVDLPFSAWAFLSTTLFGIILIFYVDAMAEERLHMVFSSPRHLMVAGGCIIVMEMVYKMDFSLIGFIICSLILGFGIYEATSLDHGRKDTFqkpdlsngmlgdelqvsslpt
Low Complexity Region (SEG)
MMSPRPNSDDRGSSNFRHTPLQILHIIASFLRIWSVYSMYRYLSQTGVSVILFIFCCLVPSSILFLLLQKPWKGRPLLNTQMVPSVINGGITALYFILWGKGLKSCGPVRALLAEYSGAVLGVLSAVLYGRRGHVWKKVGGLIAILASFYFLSQGWATETSSPFSFKDSLDAELRTEQVLGMKEMVVPLLAGILSALRRVIARRVSLKITLKRRLHAITITSATCFLFPVAMWDLIIGSKSSSSVDLPFSAWAFLSTTLFGIILIFYVDAMAEERLHMVFSSPRHLMVAGGCIIVMEMVYKMDFSLIGFIICSLILGFGIYEATSLDHGRKDTFQKPDLSNGMLGDELQVSSLPT
Disordered region (IsUnstruct)
*****************HTPLQILHIIASFLRIWSVYSMYRYLSQTGVSVILFIFCCLVPSSILFLLLQKPWKGRPLLNTQMVPSVINGGITALYFILWGKGLKSCGPVRALLAEYSGAVLGVLSAVLYGRRGHVWKKVGGLIAILASFYFLSQGWATETSSPFSFKDSLDAELRTEQVLGMKEMVVPLLAGILSALRRVIARRVSLKITLKRRLHAITITSATCFLFPVAMWDLIIG**********FSAWAFLSTTLFGIILIFYVDAMAEERLHMVFSSPRHLMVAGGCIIVMEMVYKMDFSLIGFIICSLILGFGIYEATSL*****************************
Disordered Region (DISOPRED)
********************LQILHIIASFLRIWSVYSMYRYLSQTGVSVILFIFCCLVPSSILFLLLQKPW*******TQMVPSVINGGITALYFILWGKGLKSCGPVRALLAEYSGAVLGVLSAVLYGRRGHVWKKVGGLIAILASFYFLSQGWATETSSPFSFKDSLDAELRTEQVLGMKEMVVPLLAGILSALRRVIARRVSLKITLKRRLHAITITSATCFLFPVAMWDLIIGSKSSSSVDLPFSAWAFLSTTLFGIILIFYVDAMAEERLHMVFSSPRHLMVAGGCIIVMEMVYKMDFSLIGFIICSLILGFGIYE**************************QV*****
Disordered Region (DISEMBL)
*************SNFRHTPLQILHIIASFLRIWSVYSMYRYLSQTGVSVILFIFCCLVPSSILFLLLQKPWKGRPLLNTQMVPSVINGGITALYFILWGKGLKSCGPVRALLAEYSGAVLGVLSAVLYGRRGHVWKKVGGLIAILASFYFLSQGWATETSSPFSFKDSLDAELRTEQVLGMKEMVVPLLAGILSALRRVIARRVSLKITLKRRLHAITITSATCFLFPVAMWDLIIGSKSSSSVDLPFSAWAFLSTTLFGIILIFYVDAMAEERLHMVFSSPRHLMVAGGCIIVMEMVYKMDFSLIGFIICSLILGFGIYEATSLDHGRKDTFQKPDLSNGMLGDELQVSSLPT
Disordered Region (DISPRO)
***************FRHTPLQILHIIASFLRIWSVYSMYRYLSQTGVSVILFIFCCLVPSSILFLLLQKPWKGRPLLNTQMVPSVINGGITALYFILWGKGLKSCGPVRALLAEYSGAVLGVLSAVLYGRRGHVWKKVGGLIAILASFYFLSQGWATETSSPFSFKDSLDAELRTEQVLGMKEMVVPLLAGILSALRRVIARRVSLKITLKRRLHAITITSATCFLFPVAMWDLIIGSKSSSSVDLPFSAWAFLSTTLFGIILIFYVDAMAEERLHMVFSSPRHLMVAGGCIIVMEMVYKMDFSLIGFIICSLILGFGIYEATS******************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MMSPRPNSDDRGSSNFRHTPLQILHIIASFLRIWSVYSMYRYLSQTGVSVILFIFCCLVPSSILFLLLQKPWKGRPLLNTQMVPSVINGGITALYFILWGKGLKSCGPVRALLAEYSGAVLGVLSAVLYGRRGHVWKKVGGLIAILASFYFLSQGWATETSSPFSFKDSLDAELRTEQVLGMKEMVVPLLAGILSALRRVIARRVSLKITLKRRLHAITITSATCFLFPVAMWDLIIGSKSSSSVDLPFSAWAFLSTTLFGIILIFYVDAMAEERLHMVFSSPRHLMVAGGCIIVMEMVYKMDFSLIGFIICSLILGFGIYEATSLDHGRKDTFQKPDLSNGMLGDELQVSSLPT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	355	2.2.26 [Sep-21-2011]
Q28CE7	777	Zinc transporter 5 OS=Xen	yes	no	0.709	0.324	0.247	4e-06
Q8R4H9	761	Zinc transporter 5 OS=Mus	yes	no	0.639	0.298	0.25	5e-06
Q8TAD4	765	Zinc transporter 5 OS=Hom	yes	no	0.723	0.335	0.246	2e-05

>sp|Q28CE7|ZNT5_XENTR Zinc transporter 5 OS=Xenopus tropicalis GN=slc30a5 PE=2 SV=1

 Score = 52.8 bits (125), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 126/279 (45%), Gaps = 27/279 (9%)

Query: 17  RHTPLQILHIIASFLRIWSVYSMYRYLSQTGVSVILFIFCCLVPSSILFLLLQKPWK-GR 75
           R T   +L     FL+   ++  Y  L    V ++ FIF   + S+   +L QKP+  G+
Sbjct: 24  RLTRYIVLLCFTKFLKALGIFESYDLLKV--VHIVQFIFILKLGSTCFMVLFQKPFSSGK 81

Query: 76  PLLNTQMVPSVINGGITALYFILWGKGLKSCGPVRALLA-EYSGAVLGVLSAVLYGRRGH 134
            +   Q V  V +  ++ +  +LW  GL  CGP+R LL  E+S  V+  L  VL+   G 
Sbjct: 82  SITKRQWVSIVKHAFVSCIISLLWFFGLTLCGPLRTLLLFEHSDIVVISLLTVLFTGSGG 141

Query: 135 VWKKVGG----LIAILASFYFLSQGWATETSS-PFSFKDSLDAEL--RTEQVLGMKEMVV 187
              K  G    +IA++    F +     + +  P    DS       R   +LG+ +   
Sbjct: 142 GPSKTRGAAFFIIAVICLLLFDNDDLMAKIAEHPEGHHDSALTHFLYRAFFLLGVADHKG 201

Query: 188 PLLAGILSALRRV----IARRVSLKITLKRRLHAITITSATCFLFPVAMWDLIIGSKSSS 243
            +L  +L+    V     +R++SL I   +RL A++   +   L P   W +I+ + + S
Sbjct: 202 GVLLLVLALCFNVGFHTASRKLSLDIGGAKRLQALSHLVSVIILSP---WVIILSATTES 258

Query: 244 SVDLPFSAWA-----FLSTTLFGIILIFYVDAMAEERLH 277
            ++    +W+     F++     +I+ FYV+++   ++ 
Sbjct: 259 KIE----SWSALIMPFMTVIFSVMIMDFYVESVCSVKME 293

Functions as a zinc transporter. Partly regulates cellular zinc homeostasis.
Xenopus tropicalis (taxid: 8364)

>sp|Q8R4H9|ZNT5_MOUSE Zinc transporter 5 OS=Mus musculus GN=Slc30a5 PE=2 SV=1

 Score = 52.4 bits (124), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 112/244 (45%), Gaps = 17/244 (6%)

Query: 47  GVSVILFIFCCLVPSSILFLLLQKPWK-GRPLLNTQMVPSVINGGITALYFILWGKGLKS 105
            V ++ FIF   + ++   +L QKP+  G+P+   Q +    +     +  +LW  GL  
Sbjct: 54  AVHIVQFIFILKLGTAFFMVLFQKPFSSGKPITKHQWIKIFKHAVAGCIISLLWFFGLTL 113

Query: 106 CGPVRALLA-EYSGAVLGVLSAVLYGRRGHVWKKVGG----LIAILASFYFLSQG-WATE 159
           CGP+R LL  E+S  V+  L +VL+   G    K  G    +IA++    F +    A  
Sbjct: 114 CGPLRTLLLFEHSDIVVISLLSVLFTSSGGGPAKTRGAAFFIIAVICLLLFDNDDLMAKM 173

Query: 160 TSSPFSFKDSLDAELRTEQV--LGMKEMVVPLLAGILSALRRV----IARRVSLKITLKR 213
              P    DS    +    +  LG+ +    +L  +L+   +V     +R++S+ +   +
Sbjct: 174 AEHPEGHHDSALTHMLYTAIAFLGVADHKGGVLLLVLALCCKVGFHTASRKLSIDVGGAK 233

Query: 214 RLHAITITSATCFLFPVAMWDLIIGSKSSSSVDLPFS-AWAFLSTTLFGIILIFYVDAMA 272
           RL A++   +   L P   W +++   + S V+  FS    F +   F +IL FY+D++ 
Sbjct: 234 RLQALSQLVSVFLLCP---WVIVLSVTTESKVESWFSLIMPFTTVIFFVMILDFYMDSVC 290

Query: 273 EERL 276
             ++
Sbjct: 291 SVKM 294

Functions as a zinc transporter. May be a transporter of zinc into beta cells in order to form insulin crystals. Partly regulates cellular zinc homeostasis. Required with ZNT7 for the activation of zinc-requiring enzymes, alkaline phosphatases (ALPs). Transports zinc into the lumens of the Golgi apparatus and vesicular compartments where ALPs locate, thus, converting apoALPs to holoALPs. Required with ZNT6 and ZNT7 for the activation of TNAP.

Mus musculus (taxid: 10090)

>sp|Q8TAD4|ZNT5_HUMAN Zinc transporter 5 OS=Homo sapiens GN=SLC30A5 PE=1 SV=1

 Score = 50.8 bits (120), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 123/276 (44%), Gaps = 19/276 (6%)

Query: 17  RHTPLQILHIIASFLRIWSVYSMYRYLSQTGVSVILFIFCCLVPSSILFLLLQKPWK-GR 75
           R T   +L     FL+   ++  Y  L    V ++ FIF   + ++   +L QKP+  G+
Sbjct: 28  RLTKYIVLLCFTKFLKAVGLFESYDLLK--AVHIVQFIFILKLGTAFFMVLFQKPFSSGK 85

Query: 76  PLLNTQMVPSVINGGITALYFILWGKGLKSCGPVRALLA-EYSGAVLGVLSAVLYGRRGH 134
            +   Q +    +     +  +LW  GL  CGP+R LL  E+S  V+  L +VL+   G 
Sbjct: 86  TITKHQWIKIFKHAVAGCIISLLWFFGLTLCGPLRTLLLFEHSDIVVISLLSVLFTSSGG 145

Query: 135 VWKKVGG----LIAILASFYFLSQG-WATETSSPFSFKDSLDAELRTEQV--LGMKEMVV 187
              K  G    +IA++    F +    A     P    DS    +    +  LG+ +   
Sbjct: 146 GPAKTRGAAFFIIAVICLLLFDNDDLMAKMAEHPEGHHDSALTHMLYTAIAFLGVADHKG 205

Query: 188 PLLAGILSALRRV----IARRVSLKITLKRRLHAITITSATCFLFPVAMWDLIIGSKSSS 243
            +L  +L+   +V     +R++S+ +   +RL A++   +   L P   W +++   + S
Sbjct: 206 GVLLLVLALCCKVGFHTASRKLSVDVGGAKRLQALSHLVSVLLLCP---WVIVLSVTTES 262

Query: 244 SVDLPFS-AWAFLSTTLFGIILIFYVDAMAEERLHM 278
            V+  FS    F +   F +IL FYVD++   ++ +
Sbjct: 263 KVESWFSLIMPFATVIFFVMILDFYVDSICSVKMEV 298

Functions as a zinc transporter. May be a transporter of zinc into beta cells in order to form insulin crystals. Partly regulates cellular zinc homeostasis. Required with ZNT7 for the activation of zinc-requiring enzymes, alkaline phosphatases (ALPs). Transports zinc into the lumens of the Golgi apparatus and vesicular compartments where ALPs locate, thus, converting apoALPs to holoALPs. Required with ZNT6 and ZNT7 for the activation of TNAP.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	355
225452047	357	PREDICTED: uncharacterized protein LOC10	0.997	0.991	0.784	1e-162
296087272	360	unnamed protein product [Vitis vinifera]	0.997	0.983	0.767	1e-158
449456241	356	PREDICTED: zinc transporter 5-like [Cucu	1.0	0.997	0.75	1e-158
356545770	359	PREDICTED: uncharacterized protein LOC10	1.0	0.988	0.729	1e-155
356570103	361	PREDICTED: uncharacterized protein LOC10	1.0	0.983	0.717	1e-152
145362016	361	uncharacterized protein [Arabidopsis tha	0.977	0.961	0.746	1e-152
356545772	361	PREDICTED: uncharacterized protein LOC10	1.0	0.983	0.720	1e-152
297805918	362	predicted protein [Arabidopsis lyrata su	0.977	0.958	0.730	1e-149
215741295	365	unnamed protein product [Oryza sativa Ja	0.991	0.964	0.638	1e-133
218199437	364	hypothetical protein OsI_25646 [Oryza sa	0.988	0.964	0.637	1e-133

>gi|225452047|ref|XP_002280386.1| PREDICTED: uncharacterized protein LOC100241286 [Vitis vinifera]

 Score =  578 bits (1490), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 281/358 (78%), Positives = 315/358 (87%), Gaps = 4/358 (1%)

Query: 1   MMSPRPNSDDRGSSN---FRHTPLQILHIIASFLRIWSVYSMYRYLSQTGVSVILFIFCC 57
           M+SP   S+ RGS N   FR TPLQI+HII +F+RIWSVYSMYR+LSQTG SV+LFIF C
Sbjct: 1   MISPTQISEGRGSQNSASFRETPLQIIHIIGNFMRIWSVYSMYRFLSQTGASVVLFIFSC 60

Query: 58  LVPSSILFLLLQKPWKGRPLLNTQMVPSVINGGITALYFILWGKGLKSCGPVRALLAEYS 117
           L+PSS++FL LQKPWKGRPL N Q+VPS+INGGITALYFILWGKGLKSCGPVRA+LAEYS
Sbjct: 61  LIPSSVIFLALQKPWKGRPLTNAQVVPSIINGGITALYFILWGKGLKSCGPVRAILAEYS 120

Query: 118 GAVLGVLSAVLYGRRGHVWKKVGGLIAILASFYFLSQGWATETSSPFSFKDSLDAELRTE 177
           GAVLGVLSA+LYG +GH+WKKVGGLIA+L SFYFLS GWAT TSSPFSFKD LD E RTE
Sbjct: 121 GAVLGVLSALLYGWKGHIWKKVGGLIAMLTSFYFLSLGWATATSSPFSFKDILDTENRTE 180

Query: 178 QVLGMKEMVVPLLAGILSALRRVIARRVSLKITLKRRLHAITITSATCFLFPVAMWDLII 237
           +VLGMKEM +P+ AGILSALRRVIARRVSLK  LKRRLHAIT  SATCFLFPVAMWD+II
Sbjct: 181 RVLGMKEMAIPIFAGILSALRRVIARRVSLKNQLKRRLHAITTASATCFLFPVAMWDMII 240

Query: 238 GSKSSSSVDLPFSAWAFLSTTLFGIILIFYVDAMAEERLHMVFSSPRHLMVAGGCIIVME 297
           G+ S  S  LPFS WA+LST LFGIILIFYVD++AEERLHMVFSSPRHLMVAGGCIIVME
Sbjct: 241 GTSSEGSRQLPFSTWAYLSTILFGIILIFYVDSIAEERLHMVFSSPRHLMVAGGCIIVME 300

Query: 298 MVYKMDFSLIGFIICSLILGFGIYEATSLDHGRKDTFQKPDLSNGMLGDELQVSSLPT 355
           +VYKMDFSL GF+ICS+ILGFGI+EATSLD  RK + Q PDLSN +LGD++Q+ SLPT
Sbjct: 301 IVYKMDFSLPGFLICSIILGFGIFEATSLDRNRKGS-QTPDLSNEILGDQIQMHSLPT 357

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296087272|emb|CBI33646.3| unnamed protein product [Vitis vinifera]

 Score =  563 bits (1450), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 277/361 (76%), Positives = 312/361 (86%), Gaps = 7/361 (1%)

Query: 1   MMSPRPNSDDRGSSN---FRHTPLQILHIIASFLRIWSVYSMYRYLSQTGVSVILFIFCC 57
           M+SP   S+ RGS N   FR TPLQI+HII +F+RIWSVYSMYR+LSQTG SV+LFIF C
Sbjct: 1   MISPTQISEGRGSQNSASFRETPLQIIHIIGNFMRIWSVYSMYRFLSQTGASVVLFIFSC 60

Query: 58  LVPSSILFLLLQKPWKGRPLLNTQMVPSVINGGITALYFILWGKGLKSCGPVRALLAEYS 117
           L+PSS++FL LQKPWKGRPL N Q+VPS+INGGITALYFILWGKGLKSCGPVRA+LAEYS
Sbjct: 61  LIPSSVIFLALQKPWKGRPLTNAQVVPSIINGGITALYFILWGKGLKSCGPVRAILAEYS 120

Query: 118 GAVLGVLSAVLYGRRGHVWKKVGGLIAILASFYFLSQGWATETSSPFSF---KDSLDAEL 174
           GAVLGVLSA+LYG +GH+WKKVGGLIA+L SFYFLS GWAT TSSPF     +  LD E 
Sbjct: 121 GAVLGVLSALLYGWKGHIWKKVGGLIAMLTSFYFLSLGWATATSSPFYILLKEYILDTEN 180

Query: 175 RTEQVLGMKEMVVPLLAGILSALRRVIARRVSLKITLKRRLHAITITSATCFLFPVAMWD 234
           RTE+VLGMKEM +P+ AGILSALRRVIARRVSLK  LKRRLHAIT  SATCFLFPVAMWD
Sbjct: 181 RTERVLGMKEMAIPIFAGILSALRRVIARRVSLKNQLKRRLHAITTASATCFLFPVAMWD 240

Query: 235 LIIGSKSSSSVDLPFSAWAFLSTTLFGIILIFYVDAMAEERLHMVFSSPRHLMVAGGCII 294
           +IIG+ S  S  LPFS WA+LST LFGIILIFYVD++AEERLHMVFSSPRHLMVAGGCII
Sbjct: 241 MIIGTSSEGSRQLPFSTWAYLSTILFGIILIFYVDSIAEERLHMVFSSPRHLMVAGGCII 300

Query: 295 VMEMVYKMDFSLIGFIICSLILGFGIYEATSLDHGRKDTFQKPDLSNGMLGDELQVSSLP 354
           VME+VYKMDFSL GF+ICS+ILGFGI+EATSLD  RK + Q PDLSN +LGD++Q+ SLP
Sbjct: 301 VMEIVYKMDFSLPGFLICSIILGFGIFEATSLDRNRKGS-QTPDLSNEILGDQIQMHSLP 359

Query: 355 T 355
           T
Sbjct: 360 T 360

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449456241|ref|XP_004145858.1| PREDICTED: zinc transporter 5-like [Cucumis sativus] gi|449484549|ref|XP_004156913.1| PREDICTED: zinc transporter 5-like [Cucumis sativus]

 Score =  563 bits (1450), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 267/356 (75%), Positives = 313/356 (87%), Gaps = 1/356 (0%)

Query: 1   MMSPRPNSDDRGSS-NFRHTPLQILHIIASFLRIWSVYSMYRYLSQTGVSVILFIFCCLV 59
           MMSPRP ++DRGSS +FRHTPLQI+H++ +F RIWS+YSMYRY SQTG SV+LF+FCCL 
Sbjct: 1   MMSPRPMTEDRGSSPHFRHTPLQIIHMVGNFFRIWSIYSMYRYFSQTGASVVLFLFCCLA 60

Query: 60  PSSILFLLLQKPWKGRPLLNTQMVPSVINGGITALYFILWGKGLKSCGPVRALLAEYSGA 119
           P++I+FL LQKPWKG+PL NTQ+VPSVING ITALYFILWGKGLK+CGP+RA+LAEYSGA
Sbjct: 61  PAAIIFLTLQKPWKGKPLSNTQVVPSVINGAITALYFILWGKGLKACGPLRAILAEYSGA 120

Query: 120 VLGVLSAVLYGRRGHVWKKVGGLIAILASFYFLSQGWATETSSPFSFKDSLDAELRTEQV 179
           VLGVLSAVLYGRRG VWKKVGGLIA+L SFYFLSQGWA  T  PFS KD  D++ +TEQV
Sbjct: 121 VLGVLSAVLYGRRGFVWKKVGGLIAMLVSFYFLSQGWAMATHFPFSRKDGFDSKDQTEQV 180

Query: 180 LGMKEMVVPLLAGILSALRRVIARRVSLKITLKRRLHAITITSATCFLFPVAMWDLIIGS 239
           LG+KEM++P+ AGILSALRRVIARRVSLK  LKRRLHAIT+ SATCFLFP+AMWD+IIGS
Sbjct: 181 LGLKEMLIPIFAGILSALRRVIARRVSLKNQLKRRLHAITMASATCFLFPIAMWDMIIGS 240

Query: 240 KSSSSVDLPFSAWAFLSTTLFGIILIFYVDAMAEERLHMVFSSPRHLMVAGGCIIVMEMV 299
            S +  +LPFS WAFLST +FG+ILIFYVD++AEERLHMVFSSPRHLMVAGG II++E+V
Sbjct: 241 TSDNGRELPFSTWAFLSTIIFGVILIFYVDSIAEERLHMVFSSPRHLMVAGGSIILLEIV 300

Query: 300 YKMDFSLIGFIICSLILGFGIYEATSLDHGRKDTFQKPDLSNGMLGDELQVSSLPT 355
           YKMDFSL+GF+IC  ILGFGIYEATSLD  RKD+ +  D SN +L ++ Q+ SLPT
Sbjct: 301 YKMDFSLVGFVICCSILGFGIYEATSLDRSRKDSSRYHDTSNDLLDNQDQMPSLPT 356

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356545770|ref|XP_003541308.1| PREDICTED: uncharacterized protein LOC100785654 isoform 1 [Glycine max]

 Score =  553 bits (1426), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 262/359 (72%), Positives = 309/359 (86%), Gaps = 4/359 (1%)

Query: 1   MMSPRPNSDDRGS--SNFRHTPLQILHIIASFLRIWSVYSMYRYLSQTGVSVILFIFCCL 58
           MMSP   S+DRG+   +FRHTP QI+HI+A+F+RIWS+YSMYRY  QTG SV+LF+F CL
Sbjct: 1   MMSPNRVSEDRGTPPQHFRHTPFQIIHIVANFMRIWSIYSMYRYFLQTGASVVLFLFACL 60

Query: 59  VPSSILFLLLQKPWKGRPLLNTQMVPSVINGGITALYFILWGKGLKSCGPVRALLAEYSG 118
            P+SILFL+LQKPWKGRPL NTQ+VPS+INGGITALY +LWGKGLKSCGPVRA+LAEYSG
Sbjct: 61  APASILFLILQKPWKGRPLSNTQIVPSIINGGITALYLVLWGKGLKSCGPVRAILAEYSG 120

Query: 119 AVLGVLSAVLYGRRGHVWKKVGGLIAILASFYFLSQGWATETSSPFSFKDSLDAELRTEQ 178
           AVLGVLSAVLYGRRGH+WKK+GGLIA+LAS Y LS+GWAT T SPFS++D  D+E +TE 
Sbjct: 121 AVLGVLSAVLYGRRGHLWKKIGGLIAMLASLYLLSEGWATATYSPFSWEDRDDSEAKTEP 180

Query: 179 VLGMKEMVVPLLAGILSALRRVIARRVSLKITLKRRLHAITITSATCFLFPVAMWDLIIG 238
           VLG++ M+VP++AGILSALRRVIARRVS+K  LKRRLHA+TI SATCF+FP+AMWD+IIG
Sbjct: 181 VLGLRHMLVPIIAGILSALRRVIARRVSIKNQLKRRLHALTIASATCFMFPIAMWDMIIG 240

Query: 239 --SKSSSSVDLPFSAWAFLSTTLFGIILIFYVDAMAEERLHMVFSSPRHLMVAGGCIIVM 296
             S+S S+  LPFSAWAFLST LFG I+IFY D++AEERLHMVFSSPRHL  AG CII+M
Sbjct: 241 SSSESDSNAKLPFSAWAFLSTILFGNIVIFYADSIAEERLHMVFSSPRHLAAAGACIIIM 300

Query: 297 EMVYKMDFSLIGFIICSLILGFGIYEATSLDHGRKDTFQKPDLSNGMLGDELQVSSLPT 355
           E VYKMDFSL GF IC LILGFGIYEATSL+  RKD+ +  DLSNG   +++Q+S LPT
Sbjct: 301 EKVYKMDFSLTGFTICCLILGFGIYEATSLERNRKDSIRNSDLSNGEFDNQIQMSPLPT 359

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356570103|ref|XP_003553230.1| PREDICTED: uncharacterized protein LOC100803797 [Glycine max]

 Score =  544 bits (1402), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 259/361 (71%), Positives = 308/361 (85%), Gaps = 6/361 (1%)

Query: 1   MMSPRPNSDDRGS--SNFRHTPLQILHIIASFLRIWSVYSMYRYLSQTGVSVILFIFCCL 58
           MMSP   S+DRG+   +FRHTP QI+HI+A+F+RIWS+YSMYRY  QTG SV+LF+F CL
Sbjct: 1   MMSPNRVSEDRGTPPQHFRHTPFQIIHIVANFMRIWSIYSMYRYFLQTGASVVLFLFACL 60

Query: 59  VPSSILFLLLQKPWKGRPLLNTQMVPSVINGGITALYFILWGKGLKSCGPVRALLAEYSG 118
            P+SILFL+LQKPWKGRPL N Q+VPS+INGGITALY +LWGKGLKSCGPVRA+LAEYSG
Sbjct: 61  APASILFLILQKPWKGRPLSNAQVVPSIINGGITALYLVLWGKGLKSCGPVRAILAEYSG 120

Query: 119 AVLGVLSAVLYGRRGHVWKKVGGLIAILASFYFLSQGWATETSSPFSF--KDSLDAELRT 176
           AVLGVLSAVLYGRRGH+WKK+GGLIA+LAS Y LS+GWAT T SPF    + + D+E++T
Sbjct: 121 AVLGVLSAVLYGRRGHLWKKIGGLIAMLASLYLLSEGWATATHSPFYILSQTADDSEVKT 180

Query: 177 EQVLGMKEMVVPLLAGILSALRRVIARRVSLKITLKRRLHAITITSATCFLFPVAMWDLI 236
           E VLG+++M+VP++AGILSALRRVIARRVS+K  LKRRLHA+TI SATCF+FP+AMWD+I
Sbjct: 181 EPVLGLRKMLVPIIAGILSALRRVIARRVSIKNQLKRRLHALTIASATCFMFPIAMWDMI 240

Query: 237 IG--SKSSSSVDLPFSAWAFLSTTLFGIILIFYVDAMAEERLHMVFSSPRHLMVAGGCII 294
           IG  S+S S+  LPFSAWAFLST LFG I+IFY D++AEERLHMVFSSPRHL  AG CII
Sbjct: 241 IGSSSESDSNTKLPFSAWAFLSTILFGNIVIFYADSIAEERLHMVFSSPRHLAAAGACII 300

Query: 295 VMEMVYKMDFSLIGFIICSLILGFGIYEATSLDHGRKDTFQKPDLSNGMLGDELQVSSLP 354
           +ME VYKMDFSL GF IC LILGFGIYEATSL+H RKD+ +  DLSNG   +++ +S LP
Sbjct: 301 IMEKVYKMDFSLTGFTICCLILGFGIYEATSLEHNRKDSIRNSDLSNGEFDNQILMSPLP 360

Query: 355 T 355
           T
Sbjct: 361 T 361

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145362016|ref|NP_851104.2| uncharacterized protein [Arabidopsis thaliana] gi|20260168|gb|AAM12982.1| unknown protein [Arabidopsis thaliana] gi|21389633|gb|AAM48015.1| unknown protein [Arabidopsis thaliana] gi|332006922|gb|AED94305.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  544 bits (1402), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 262/351 (74%), Positives = 304/351 (86%), Gaps = 4/351 (1%)

Query: 1   MMSPRPNSDDRGSSNFRHTPLQILHIIASFLRIWSVYSMYRYLSQTGVSVILFIFCCLVP 60
           MMSP+  SDDRGSS+FRHTP QI+H+I +F RIWSVYSMYRYL+QTG  V+LF+FCCLVP
Sbjct: 1   MMSPKQISDDRGSSHFRHTPFQIIHLIGNFFRIWSVYSMYRYLNQTGAPVVLFLFCCLVP 60

Query: 61  SSILFLLLQKPWKGRPLLNTQMVPSVINGGITALYFILWGKGLKSCGPVRALLAEYSGAV 120
           SSI+FL++QKPWKGR L N Q+VPS+ING ITALYFILWGKGLKSCGP+RA+L+EYSGAV
Sbjct: 61  SSIIFLIIQKPWKGRALSNQQIVPSLINGVITALYFILWGKGLKSCGPLRAILSEYSGAV 120

Query: 121 LGVLSAVLYGRRGHVWKKVGGLIAILASFYFLSQGWATETSSPFSFKDSLDA---ELRTE 177
           LGVLS VLYGRRGHVWKKVGGLIA+L + +FLSQGWAT + SPFS KDS +    E++TE
Sbjct: 121 LGVLSGVLYGRRGHVWKKVGGLIAMLVALFFLSQGWATSSLSPFSTKDSTETKEEEVQTE 180

Query: 178 QVLGMKEMVVPLLAGILSALRRVIARRVSLKITLKRRLHAITITSATCFLFPVAMWDLII 237
           Q LGM  M++P+ AGILSALRRVIARRVSLK   K+RLHAITITSATCFLFPVAMWDLII
Sbjct: 181 QALGMMGMMIPVFAGILSALRRVIARRVSLKNQQKKRLHAITITSATCFLFPVAMWDLII 240

Query: 238 GSKSSSSVDLPFSAWAFLSTTLFGIILIFYVDAMAEERLHMVFSSPRHLMVAGGCIIVME 297
           GS S  + +LPFSAWAFLST +FGIILIFYVD +AEERLHMVFSSPRHLMVAG CIIVME
Sbjct: 241 GSSSGKTSELPFSAWAFLSTIIFGIILIFYVDNIAEERLHMVFSSPRHLMVAGVCIIVME 300

Query: 298 MVYKMDFSLIGFIICSLILGFGIYEATSLDHGRKD-TFQKPDLSNGMLGDE 347
           + Y+MDFSL GFI+C L+LGFGI+EATSL+  +KD + +  D SNG+LG+ 
Sbjct: 301 LAYEMDFSLPGFIVCCLVLGFGIFEATSLERNKKDSSLKSEDPSNGILGNN 351

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356545772|ref|XP_003541309.1| PREDICTED: uncharacterized protein LOC100785654 isoform 2 [Glycine max]

 Score =  543 bits (1400), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 260/361 (72%), Positives = 305/361 (84%), Gaps = 6/361 (1%)

Query: 1   MMSPRPNSDDRGS--SNFRHTPLQILHIIASFLRIWSVYSMYRYLSQTGVSVILFIFCCL 58
           MMSP   S+DRG+   +FRHTP QI+HI+A+F+RIWS+YSMYRY  QTG SV+LF+F CL
Sbjct: 1   MMSPNRVSEDRGTPPQHFRHTPFQIIHIVANFMRIWSIYSMYRYFLQTGASVVLFLFACL 60

Query: 59  VPSSILFLLLQKPWKGRPLLNTQMVPSVINGGITALYFILWGKGLKSCGPVRALLAEYSG 118
            P+SILFL+LQKPWKGRPL NTQ+VPS+INGGITALY +LWGKGLKSCGPVRA+LAEYSG
Sbjct: 61  APASILFLILQKPWKGRPLSNTQIVPSIINGGITALYLVLWGKGLKSCGPVRAILAEYSG 120

Query: 119 AVLGVLSAVLYGRRGHVWKKVGGLIAILASFYFLSQGWATETSSPFSFKDSL--DAELRT 176
           AVLGVLSAVLYGRRGH+WKK+GGLIA+LAS Y LS+GWAT T SPF        D+E +T
Sbjct: 121 AVLGVLSAVLYGRRGHLWKKIGGLIAMLASLYLLSEGWATATYSPFYILSQTVDDSEAKT 180

Query: 177 EQVLGMKEMVVPLLAGILSALRRVIARRVSLKITLKRRLHAITITSATCFLFPVAMWDLI 236
           E VLG++ M+VP++AGILSALRRVIARRVS+K  LKRRLHA+TI SATCF+FP+AMWD+I
Sbjct: 181 EPVLGLRHMLVPIIAGILSALRRVIARRVSIKNQLKRRLHALTIASATCFMFPIAMWDMI 240

Query: 237 IG--SKSSSSVDLPFSAWAFLSTTLFGIILIFYVDAMAEERLHMVFSSPRHLMVAGGCII 294
           IG  S+S S+  LPFSAWAFLST LFG I+IFY D++AEERLHMVFSSPRHL  AG CII
Sbjct: 241 IGSSSESDSNAKLPFSAWAFLSTILFGNIVIFYADSIAEERLHMVFSSPRHLAAAGACII 300

Query: 295 VMEMVYKMDFSLIGFIICSLILGFGIYEATSLDHGRKDTFQKPDLSNGMLGDELQVSSLP 354
           +ME VYKMDFSL GF IC LILGFGIYEATSL+  RKD+ +  DLSNG   +++Q+S LP
Sbjct: 301 IMEKVYKMDFSLTGFTICCLILGFGIYEATSLERNRKDSIRNSDLSNGEFDNQIQMSPLP 360

Query: 355 T 355
           T
Sbjct: 361 T 361

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297805918|ref|XP_002870843.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297316679|gb|EFH47102.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  535 bits (1377), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 257/352 (73%), Positives = 301/352 (85%), Gaps = 5/352 (1%)

Query: 1   MMSPRPNSDDRGSSNFRHTPLQILHIIASFLRIWSVYSMYRYLSQTGVSVILFIFCCLVP 60
           MMSP+  SDDRGSS+FR+TP QI+H+I +F RIWSVYSMYRYL+QTG  V+ F+FCCLVP
Sbjct: 1   MMSPKQISDDRGSSHFRNTPFQIIHLIGNFFRIWSVYSMYRYLNQTGAPVVFFLFCCLVP 60

Query: 61  SSILFLLLQKPWKGRPLLNTQMVPSVINGGITALYFILWGKGLKSCGPVRALLAEYSGAV 120
           SSI+FL+LQKPWKGR L N Q+VPS+ING ITALYFILWGKGLKSCGP+RA+L+EYSGAV
Sbjct: 61  SSIIFLILQKPWKGRALSNQQIVPSLINGVITALYFILWGKGLKSCGPLRAILSEYSGAV 120

Query: 121 LGVLSAVLYGRRGHVWKKVGGLIAILASFYFLSQGWATETSSPFSF----KDSLDAELRT 176
           LGVLS VLYGRRGHVWKKVGGLIA+L + +FLSQGWAT + SPF       ++ + E++T
Sbjct: 121 LGVLSGVLYGRRGHVWKKVGGLIAMLVALFFLSQGWATSSLSPFYILLRNTETKEEEVQT 180

Query: 177 EQVLGMKEMVVPLLAGILSALRRVIARRVSLKITLKRRLHAITITSATCFLFPVAMWDLI 236
           EQ LGM  M++P+ AGILSALRRVIARRVSLK   K+RLHAITITSATCFLFPVAMWDLI
Sbjct: 181 EQALGMMGMMIPVFAGILSALRRVIARRVSLKNQQKKRLHAITITSATCFLFPVAMWDLI 240

Query: 237 IGSKSSSSVDLPFSAWAFLSTTLFGIILIFYVDAMAEERLHMVFSSPRHLMVAGGCIIVM 296
           IGS S  + +LPFSAWAFLST +FGIILIFYVD +AEERLHMVFSSPRHLMVAG CIIVM
Sbjct: 241 IGSSSGKTSELPFSAWAFLSTIVFGIILIFYVDNIAEERLHMVFSSPRHLMVAGACIIVM 300

Query: 297 EMVYKMDFSLIGFIICSLILGFGIYEATSLDHGRKD-TFQKPDLSNGMLGDE 347
           E+ Y+MDFSL GFI+C L+LGFGI+EATSL+  +KD + +  D SNG+LG+ 
Sbjct: 301 ELAYEMDFSLPGFIVCCLVLGFGIFEATSLERSKKDSSLKSEDPSNGILGNN 352

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|215741295|dbj|BAG97790.1| unnamed protein product [Oryza sativa Japonica Group]

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 235/368 (63%), Positives = 293/368 (79%), Gaps = 16/368 (4%)

Query: 1   MMSPRPN-----------SDDRGSSNFRHTPLQILHIIASFLRIWSVYSMYRYLSQTGVS 49
           MMSPRP+           S  R     R TPLQ++HI+ +F RIWSVYS+Y YLS +G S
Sbjct: 1   MMSPRPSASAAPEGGGGASTSRSVPTARSTPLQVIHILGNFARIWSVYSLYNYLSSSGDS 60

Query: 50  VILFIFCCLVPSSILFLLLQKPWKGRPLLNTQMVPSVINGGITALYFILWGKGLKSCGPV 109
           ++ FIF CLVP+S++FL LQKPWKGRPL NTQ+VP+VINGGI ALYF+LWGKGL +CGP+
Sbjct: 61  MVGFIFSCLVPASVIFLALQKPWKGRPLPNTQVVPTVINGGILALYFVLWGKGLLACGPL 120

Query: 110 RALLAEYSGAVLGVLSAVLYGRRGHVWKKVGGLIAILASFYFLSQGWATETSSP-FSF-K 167
            ALLAEY+GAVLGVLSA LYGR+ ++WKK+GGL A+L ++Y L  GWAT T SP +SF  
Sbjct: 121 VALLAEYAGAVLGVLSAALYGRKVNIWKKIGGLAAMLVAYYLLGNGWATRTHSPLYSFGS 180

Query: 168 DSLDAELRTEQVLGMKEMVVPLLAGILSALRRVIARRVSLKITLKRRLHAITITSATCFL 227
           +SL+   +  QV+GMKEMVVPL AGILSALRRV+ARRVSLK  LKRRLHAI + SATCFL
Sbjct: 181 ESLE---KGTQVIGMKEMVVPLTAGILSALRRVLARRVSLKNQLKRRLHAINVASATCFL 237

Query: 228 FPVAMWDLIIGSKSSSSVDLPFSAWAFLSTTLFGIILIFYVDAMAEERLHMVFSSPRHLM 287
           FP AMWD I+GS S S V L F +WA+LST LFG++LIFYVD +AEE+LH+VFSSPRHLM
Sbjct: 238 FPFAMWDTILGSASDSIVKLQFPSWAYLSTVLFGMVLIFYVDNVAEEKLHLVFSSPRHLM 297

Query: 288 VAGGCIIVMEMVYKMDFSLIGFIICSLILGFGIYEATSLDHGRKDTFQKPDLSNGMLGDE 347
           V+ GCIIV+E++YKMDFSL+GF++CS+ILGFGI+EATSL+  +K   +  +LSNG   ++
Sbjct: 298 VSTGCIIVLEILYKMDFSLLGFLLCSVILGFGIFEATSLERSKKSPLEAHELSNGSFHNQ 357

Query: 348 LQVSSLPT 355
           L +S+LP+
Sbjct: 358 LPISALPS 365

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|218199437|gb|EEC81864.1| hypothetical protein OsI_25646 [Oryza sativa Indica Group]

 Score =  479 bits (1234), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 234/367 (63%), Positives = 292/367 (79%), Gaps = 16/367 (4%)

Query: 2   MSPRPN-----------SDDRGSSNFRHTPLQILHIIASFLRIWSVYSMYRYLSQTGVSV 50
           MSPRP+           S  R     R TPLQ++HI+ +F RIWSVYS+Y YLS +G S+
Sbjct: 1   MSPRPSASAAPEGGGGASTSRSVPTARSTPLQVIHILGNFARIWSVYSLYNYLSSSGDSM 60

Query: 51  ILFIFCCLVPSSILFLLLQKPWKGRPLLNTQMVPSVINGGITALYFILWGKGLKSCGPVR 110
           + FIF CLVP+S++FL LQKPWKGRPL NTQ+VP+VINGGI ALYF+LWGKGL +CGP+ 
Sbjct: 61  VGFIFSCLVPASVIFLALQKPWKGRPLPNTQVVPTVINGGILALYFVLWGKGLLACGPLV 120

Query: 111 ALLAEYSGAVLGVLSAVLYGRRGHVWKKVGGLIAILASFYFLSQGWATETSSP-FSF-KD 168
           ALLAEY+GAVLGVLSA LYGR+ ++WKK+GGL A+L ++Y L  GWAT T SP +SF  +
Sbjct: 121 ALLAEYAGAVLGVLSAALYGRKVNIWKKIGGLTAMLVAYYLLGNGWATRTHSPLYSFGSE 180

Query: 169 SLDAELRTEQVLGMKEMVVPLLAGILSALRRVIARRVSLKITLKRRLHAITITSATCFLF 228
           SL+   +  QV+GMKEMVVPL AGILSALRRV+ARRVSLK  LKRRLHAI + SATCFLF
Sbjct: 181 SLE---KGTQVIGMKEMVVPLTAGILSALRRVLARRVSLKNQLKRRLHAINVASATCFLF 237

Query: 229 PVAMWDLIIGSKSSSSVDLPFSAWAFLSTTLFGIILIFYVDAMAEERLHMVFSSPRHLMV 288
           P AMWD I+GS S S V L F +WA+LST LFG++LIFYVD +AEE+LH+VFSSPRHLMV
Sbjct: 238 PFAMWDTILGSASDSIVKLQFPSWAYLSTVLFGMVLIFYVDNVAEEKLHLVFSSPRHLMV 297

Query: 289 AGGCIIVMEMVYKMDFSLIGFIICSLILGFGIYEATSLDHGRKDTFQKPDLSNGMLGDEL 348
           + GCIIV+E++YKMDFSL+GF++CS+ILGFGI+EATSL+  +K   +  +LSNG   ++L
Sbjct: 298 STGCIIVLEILYKMDFSLLGFLLCSVILGFGIFEATSLERSKKSPLEAHELSNGSFHNQL 357

Query: 349 QVSSLPT 355
            +S+LP+
Sbjct: 358 PISALPS 364

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	355
TAIR|locus:2177381	361	AT5G38380 "AT5G38380" [Arabido	0.974	0.958	0.751	8.9e-141
UNIPROTKB|I3LLW5	496	I3LLW5 "Uncharacterized protei	0.718	0.514	0.266	1.9e-10
UNIPROTKB|I3LQL7	765	LOC100737089 "Uncharacterized	0.718	0.333	0.266	3.9e-10
UNIPROTKB|E1B955	769	SLC30A5 "Uncharacterized prote	0.723	0.334	0.257	8.5e-10
UNIPROTKB|Q8TAD4	765	SLC30A5 "Zinc transporter 5" [	0.723	0.335	0.257	1.4e-09
UNIPROTKB|F1Q2B9	766	SLC30A5 "Uncharacterized prote	0.723	0.335	0.257	1.8e-09
UNIPROTKB|Q5ZLF4	770	SLC30A5 "Zinc transporter 5" [	0.718	0.331	0.255	3.1e-09
MGI|MGI:1916298	761	Slc30a5 "solute carrier family	0.718	0.335	0.255	3.9e-09
ZFIN|ZDB-GENE-040718-6	775	slc30a5 "solute carrier family	0.721	0.330	0.245	4e-09
UNIPROTKB|F1N8U2	737	SLC30A5 "Zinc transporter 5" [	0.687	0.331	0.254	8.2e-09

TAIR|locus:2177381 AT5G38380 "AT5G38380" [Arabidopsis thaliana (taxid:3702)]

 Score = 1377 (489.8 bits), Expect = 8.9e-141, P = 8.9e-141
 Identities = 263/350 (75%), Positives = 304/350 (86%)

Query:     1 MMSPRPNSDDRGSSNFRHTPLQILHIIASFLRIWSVYSMYRYLSQTGVSVILFIFCCLVP 60
             MMSP+  SDDRGSS+FRHTP QI+H+I +F RIWSVYSMYRYL+QTG  V+LF+FCCLVP
Sbjct:     1 MMSPKQISDDRGSSHFRHTPFQIIHLIGNFFRIWSVYSMYRYLNQTGAPVVLFLFCCLVP 60

Query:    61 SSILFLLLQKPWKGRPLLNTQMVPSVINGGITALYFILWGKGLKSCGPVRALLAEYSGAV 120
             SSI+FL++QKPWKGR L N Q+VPS+ING ITALYFILWGKGLKSCGP+RA+L+EYSGAV
Sbjct:    61 SSIIFLIIQKPWKGRALSNQQIVPSLINGVITALYFILWGKGLKSCGPLRAILSEYSGAV 120

Query:   121 LGVLSAVLYGRRGHVWKKVGGLIAILASFYFLSQGWATETSSPFSFKDSLDA---ELRTE 177
             LGVLS VLYGRRGHVWKKVGGLIA+L + +FLSQGWAT + SPFS KDS +    E++TE
Sbjct:   121 LGVLSGVLYGRRGHVWKKVGGLIAMLVALFFLSQGWATSSLSPFSTKDSTETKEEEVQTE 180

Query:   178 QVLGMKEMVVPLLAGILSALRRVIARRVSLKITLKRRLHAITITSATCFLFPVAMWDLII 237
             Q LGM  M++P+ AGILSALRRVIARRVSLK   K+RLHAITITSATCFLFPVAMWDLII
Sbjct:   181 QALGMMGMMIPVFAGILSALRRVIARRVSLKNQQKKRLHAITITSATCFLFPVAMWDLII 240

Query:   238 GSKSSSSVDLPFSAWAFLSTTLFGIILIFYVDAMAEERLHMVFSSPRHLMVAGGCIIVME 297
             GS S  + +LPFSAWAFLST +FGIILIFYVD +AEERLHMVFSSPRHLMVAG CIIVME
Sbjct:   241 GSSSGKTSELPFSAWAFLSTIIFGIILIFYVDNIAEERLHMVFSSPRHLMVAGVCIIVME 300

Query:   298 MVYKMDFSLIGFIICSLILGFGIYEATSLDHGRKDTFQKP-DLSNGMLGD 346
             + Y+MDFSL GFI+C L+LGFGI+EATSL+  +KD+  K  D SNG+LG+
Sbjct:   301 LAYEMDFSLPGFIVCCLVLGFGIFEATSLERNKKDSSLKSEDPSNGILGN 350

GO:0003674 "molecular_function" evidence=ND

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|I3LLW5 I3LLW5 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 175 (66.7 bits), Expect = 1.9e-10, P = 1.9e-10
 Identities = 73/274 (26%), Positives = 124/274 (45%)

Query:    17 RHTPLQILHIIASFLRIWSVYSMYRYLSQTGVSVILFIFCCLVPSSILFLLLQKPWK-GR 75
             R T   +L     FL+   ++  Y  L    V ++ FIF   + ++I  +L QKP+  G+
Sbjct:     1 RLTKYIVLLCFTKFLKAVGLFESYDLLKV--VHIVQFIFILKLGTAIFMVLFQKPFSSGK 58

Query:    76 PLLNTQMVPSVINGGITALYFILWGKGLKSCGPVRALLA-EYSGAVLGVLSAVLYGRRGH 134
              +   Q +    +     +  +LW  GL  CGP+R LL  E+S  V+  L +VL+   G 
Sbjct:    59 SITKHQWIKIFKHAVAGCIISLLWFFGLTLCGPLRTLLLFEHSDIVVISLLSVLFTSSGG 118

Query:   135 VWKKVGG----LIAILASFYFLSQG-WATETSSPFSFKDS-LDAELRTE-QVLGMKEMVV 187
                K  G    +IA++    F +    A     P    DS L   L T    LG+ +   
Sbjct:   119 GPAKTRGAAFFIIAVICLLLFDNDDLMAKMAEHPEGHHDSALTHMLYTAIAFLGVADHKG 178

Query:   188 PLLAGILSALRRV----IARRVSLKITLKRRLHAITITSATCFLFPVAMWDLIIGSKSSS 243
              +L  +L+   +V     +R++SL +   +RL A++   +   L P   W +++   + S
Sbjct:   179 GVLLLVLALCCKVGFHTASRKLSLDVGGTKRLQALSHLVSVLLLCP---WVIVLSVTTES 235

Query:   244 SVDLPFS-AWAFLSTTLFGIILIFYVDAMAEERL 276
              V+  FS    F +   F +IL FYVD++   ++
Sbjct:   236 KVESWFSLVMPFTTVIFFVMILDFYVDSICSVKM 269

GO:0016021 "integral to membrane" evidence=IEA

GO:0008324 "cation transmembrane transporter activity" evidence=IEA

UNIPROTKB|I3LQL7 LOC100737089 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 175 (66.7 bits), Expect = 3.9e-10, P = 3.9e-10
 Identities = 73/274 (26%), Positives = 124/274 (45%)

Query:    17 RHTPLQILHIIASFLRIWSVYSMYRYLSQTGVSVILFIFCCLVPSSILFLLLQKPWK-GR 75
             R T   +L     FL+   ++  Y  L    V ++ FIF   + ++I  +L QKP+  G+
Sbjct:    28 RLTKYIVLLCFTKFLKAVGLFESYDLLKV--VHIVQFIFILKLGTAIFMVLFQKPFSSGK 85

Query:    76 PLLNTQMVPSVINGGITALYFILWGKGLKSCGPVRALLA-EYSGAVLGVLSAVLYGRRGH 134
              +   Q +    +     +  +LW  GL  CGP+R LL  E+S  V+  L +VL+   G 
Sbjct:    86 SITKHQWIKIFKHAVAGCIISLLWFFGLTLCGPLRTLLLFEHSDIVVISLLSVLFTSSGG 145

Query:   135 VWKKVGG----LIAILASFYFLSQG-WATETSSPFSFKDS-LDAELRTE-QVLGMKEMVV 187
                K  G    +IA++    F +    A     P    DS L   L T    LG+ +   
Sbjct:   146 GPAKTRGAAFFIIAVICLLLFDNDDLMAKMAEHPEGHHDSALTHMLYTAIAFLGVADHKG 205

Query:   188 PLLAGILSALRRV----IARRVSLKITLKRRLHAITITSATCFLFPVAMWDLIIGSKSSS 243
              +L  +L+   +V     +R++SL +   +RL A++   +   L P   W +++   + S
Sbjct:   206 GVLLLVLALCCKVGFHTASRKLSLDVGGTKRLQALSHLVSVLLLCP---WVIVLSVTTES 262

Query:   244 SVDLPFS-AWAFLSTTLFGIILIFYVDAMAEERL 276
              V+  FS    F +   F +IL FYVD++   ++
Sbjct:   263 KVESWFSLVMPFTTVIFFVMILDFYVDSICSVKM 296

GO:0016021 "integral to membrane" evidence=IEA

GO:0008324 "cation transmembrane transporter activity" evidence=IEA

UNIPROTKB|E1B955 SLC30A5 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 172 (65.6 bits), Expect = 8.5e-10, P = 8.5e-10
 Identities = 71/276 (25%), Positives = 126/276 (45%)

Query:    17 RHTPLQILHIIASFLRIWSVYSMYRYLSQTGVSVILFIFCCLVPSSILFLLLQKPWK-GR 75
             R T   +L     FL+   ++  Y  L    V V+ FIF   + ++   +L QKP+  G+
Sbjct:    30 RLTKYIVLLCFTKFLKAVGLFESYDLLKV--VHVVQFIFILKLGTAFFMVLFQKPFSSGK 87

Query:    76 PLLNTQMVPSVINGGITALYFILWGKGLKSCGPVRALLA-EYSGAVLGVLSAVLYGRRGH 134
              +   Q +    +     +  +LW  GL  CGP+R LL  E+S  V+  L +VL+   G 
Sbjct:    88 SITKRQWIKIFKHAMAGCVISLLWFFGLTLCGPLRTLLLFEHSDIVVISLLSVLFTSSGG 147

Query:   135 VWKKVGG----LIAILASFYFLSQG-WATETSSPFSFKDS-LDAELRTE-QVLGMKEMVV 187
                K  G    +IA++    F +    A     P    DS L   L T    LG+ +   
Sbjct:   148 GPAKTRGAAFFIIAVICLLLFDNDDLMAKMAEHPEGHHDSALTHMLYTAIAFLGVADHKG 207

Query:   188 PLLAGILSALRRV----IARRVSLKITLKRRLHAITITSATCFLFPVAMWDLIIGSKSSS 243
              +L  +L+   +V     +R++S+ +   +RL A++   +   L P   W +++   + S
Sbjct:   208 GVLLLVLALCCKVGFHTASRKLSIDVGGAKRLQALSQIISVLLLCP---WVIVLSVTTES 264

Query:   244 SVDLPFSAWAFLSTTLFGIILI-FYVDAMAEERLHM 278
              VD  FS     ST +F ++++ FYV+++   ++ +
Sbjct:   265 KVDSWFSLIMPFSTVIFFVMILDFYVESICSVKMEV 300

GO:0030141 "secretory granule" evidence=IEA

GO:0016324 "apical plasma membrane" evidence=IEA

GO:0010043 "response to zinc ion" evidence=IEA

GO:0006882 "cellular zinc ion homeostasis" evidence=IEA

GO:0006824 "cobalt ion transport" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0005385 "zinc ion transmembrane transporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q8TAD4 SLC30A5 "Zinc transporter 5" [Homo sapiens (taxid:9606)]

 Score = 170 (64.9 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 71/276 (25%), Positives = 124/276 (44%)

Query:    17 RHTPLQILHIIASFLRIWSVYSMYRYLSQTGVSVILFIFCCLVPSSILFLLLQKPWK-GR 75
             R T   +L     FL+   ++  Y  L    V ++ FIF   + ++   +L QKP+  G+
Sbjct:    28 RLTKYIVLLCFTKFLKAVGLFESYDLLK--AVHIVQFIFILKLGTAFFMVLFQKPFSSGK 85

Query:    76 PLLNTQMVPSVINGGITALYFILWGKGLKSCGPVRALLA-EYSGAVLGVLSAVLYGRRGH 134
              +   Q +    +     +  +LW  GL  CGP+R LL  E+S  V+  L +VL+   G 
Sbjct:    86 TITKHQWIKIFKHAVAGCIISLLWFFGLTLCGPLRTLLLFEHSDIVVISLLSVLFTSSGG 145

Query:   135 VWKKVGG----LIAILASFYFLSQG-WATETSSPFSFKDS-LDAELRTE-QVLGMKEMVV 187
                K  G    +IA++    F +    A     P    DS L   L T    LG+ +   
Sbjct:   146 GPAKTRGAAFFIIAVICLLLFDNDDLMAKMAEHPEGHHDSALTHMLYTAIAFLGVADHKG 205

Query:   188 PLLAGILSALRRV----IARRVSLKITLKRRLHAITITSATCFLFPVAMWDLIIGSKSSS 243
              +L  +L+   +V     +R++S+ +   +RL A++   +   L P   W +++   + S
Sbjct:   206 GVLLLVLALCCKVGFHTASRKLSVDVGGAKRLQALSHLVSVLLLCP---WVIVLSVTTES 262

Query:   244 SVDLPFSA-WAFLSTTLFGIILIFYVDAMAEERLHM 278
              V+  FS    F +   F +IL FYVD++   ++ +
Sbjct:   263 KVESWFSLIMPFATVIFFVMILDFYVDSICSVKMEV 298

GO:0016324 "apical plasma membrane" evidence=IDA

GO:0005385 "zinc ion transmembrane transporter activity" evidence=IDA

GO:0006829 "zinc ion transport" evidence=IDA

GO:0005887 "integral to plasma membrane" evidence=TAS

GO:0006882 "cellular zinc ion homeostasis" evidence=IDA

GO:0010043 "response to zinc ion" evidence=IDA

GO:0008270 "zinc ion binding" evidence=NAS

GO:0010155 "regulation of proton transport" evidence=NAS

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006824 "cobalt ion transport" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0030141 "secretory granule" evidence=IDA

GO:0000139 "Golgi membrane" evidence=TAS

GO:0030667 "secretory granule membrane" evidence=TAS

GO:0055085 "transmembrane transport" evidence=TAS

GO:0071577 "zinc ion transmembrane transport" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

UNIPROTKB|F1Q2B9 SLC30A5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 169 (64.5 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 71/276 (25%), Positives = 123/276 (44%)

Query:    17 RHTPLQILHIIASFLRIWSVYSMYRYLSQTGVSVILFIFCCLVPSSILFLLLQKPWK-GR 75
             R T   +L     FL+   ++  Y  L    V ++ FIF   + ++   +L QKP+  G+
Sbjct:    29 RLTKYIVLLCFTKFLKAVGLFESYDILK--AVHIVQFIFILKLGTAFFMVLFQKPFSSGK 86

Query:    76 PLLNTQMVPSVINGGITALYFILWGKGLKSCGPVRALLA-EYSGAVLGVLSAVLYGRRGH 134
              +   Q +    +     +  +LW  GL  CGP+R LL  E+S  V+  L  VL+   G 
Sbjct:    87 SITKHQWIKIFKHAVAGCIISLLWFFGLTLCGPLRTLLLFEHSDIVVISLLTVLFTSSGG 146

Query:   135 VWKKVGG----LIAILASFYFLSQG-WATETSSPFSFKDS-LDAELRTE-QVLGMKEMVV 187
                K  G    +IA++    F +    A     P    DS L   L T    LG+ +   
Sbjct:   147 GPAKTRGAAFFIIAVICLLLFDNDDLMAKMAEHPEGHHDSALTHMLYTAIAFLGVADHKG 206

Query:   188 PLLAGILSALRRV----IARRVSLKITLKRRLHAITITSATCFLFPVAMWDLIIGSKSSS 243
              +L  +L+   +V     +R++S+ +   +RL A++   +   L P   W +++   + S
Sbjct:   207 GVLLLVLALCCKVGFHTASRKLSIDVGGAKRLQALSHLISVLLLCP---WVIVLCGTTES 263

Query:   244 SVDLPFSA-WAFLSTTLFGIILIFYVDAMAEERLHM 278
              V+  FS    F +   F +IL FYVD++   ++ +
Sbjct:   264 KVESWFSLIMPFTTVIFFVMILDFYVDSICSVKMEV 299

GO:0030141 "secretory granule" evidence=IEA

GO:0016324 "apical plasma membrane" evidence=IEA

GO:0010043 "response to zinc ion" evidence=IEA

GO:0006882 "cellular zinc ion homeostasis" evidence=IEA

GO:0006824 "cobalt ion transport" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0005385 "zinc ion transmembrane transporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q5ZLF4 SLC30A5 "Zinc transporter 5" [Gallus gallus (taxid:9031)]

 Score = 167 (63.8 bits), Expect = 3.1e-09, P = 3.1e-09
 Identities = 70/274 (25%), Positives = 126/274 (45%)

Query:    17 RHTPLQILHIIASFLRIWSVYSMYRYLSQTGVSVILFIFCCLVPSSILFLLLQKPWK-GR 75
             R T   +L   A FL+   ++  Y  L    V ++ FIF   + S+   +L QKP+  G+
Sbjct:    25 RLTRYIVLLCFAKFLKAVGLFESYDLLK--AVHLVQFIFIVKLGSAFFMVLFQKPFSSGK 82

Query:    76 PLLNTQMVPSVINGGITALYFILWGKGLKSCGPVRALLA-EYSGAVLGVLSAVLYGRRGH 134
              +   Q +    +  +  +  +LW  GL  CGP+R LL  E+S  V+  L +VL+   G 
Sbjct:    83 VVTKHQWIKIFKHAVVGCIISLLWFFGLTLCGPLRTLLLFEHSDVVVLSLLSVLFTSSGG 142

Query:   135 VWKKVGG----LIAILASFYFLSQGWATETSS-PFSFKDS-LDAELRTE-QVLGMKEMVV 187
                K  G    +IA++    F +     + +  P    DS L   L T    LG+ +   
Sbjct:   143 GPAKTRGAAFFIIAVICLLLFDNDDLMAKIAEHPEGHHDSALTHVLYTVIAFLGVADHKG 202

Query:   188 PLLAGILSALRRV----IARRVSLKITLKRRLHAITITSATCFLFPVAMWDLIIGSKSSS 243
              +L  +L+   +V     +R++S+ +   +RL A++   +   L P   W +++   + S
Sbjct:   203 GVLLLVLALCCKVGFHMASRKLSVDVGGAKRLQALSHLVSVLLLCP---WVIVLSLTTES 259

Query:   244 SVDLPFSA-WAFLSTTLFGIILIFYVDAMAEERL 276
              V+   S    F++   F +IL FYV+++   ++
Sbjct:   260 KVESWSSLIMPFITVIFFVVILDFYVESICSVKM 293

GO:0008324 "cation transmembrane transporter activity" evidence=IEA

GO:0006829 "zinc ion transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

MGI|MGI:1916298 Slc30a5 "solute carrier family 30 (zinc transporter), member 5" [Mus musculus (taxid:10090)]

 Score = 166 (63.5 bits), Expect = 3.9e-09, P = 3.9e-09
 Identities = 70/274 (25%), Positives = 124/274 (45%)

Query:    17 RHTPLQILHIIASFLRIWSVYSMYRYLSQTGVSVILFIFCCLVPSSILFLLLQKPWK-GR 75
             R T   +L  +   L+   ++  Y  L    V ++ FIF   + ++   +L QKP+  G+
Sbjct:    26 RLTRYILLLCLTKCLKAVGLFESYDLLK--AVHIVQFIFILKLGTAFFMVLFQKPFSSGK 83

Query:    76 PLLNTQMVPSVINGGITALYFILWGKGLKSCGPVRALLA-EYSGAVLGVLSAVLYGRRGH 134
             P+   Q +    +     +  +LW  GL  CGP+R LL  E+S  V+  L +VL+   G 
Sbjct:    84 PITKHQWIKIFKHAVAGCIISLLWFFGLTLCGPLRTLLLFEHSDIVVISLLSVLFTSSGG 143

Query:   135 VWKKVGG----LIAILASFYFLSQG-WATETSSPFSFKDS-LDAELRTE-QVLGMKEMVV 187
                K  G    +IA++    F +    A     P    DS L   L T    LG+ +   
Sbjct:   144 GPAKTRGAAFFIIAVICLLLFDNDDLMAKMAEHPEGHHDSALTHMLYTAIAFLGVADHKG 203

Query:   188 PLLAGILSALRRV----IARRVSLKITLKRRLHAITITSATCFLFPVAMWDLIIGSKSSS 243
              +L  +L+   +V     +R++S+ +   +RL A++   +   L P   W +++   + S
Sbjct:   204 GVLLLVLALCCKVGFHTASRKLSIDVGGAKRLQALSQLVSVFLLCP---WVIVLSVTTES 260

Query:   244 SVDLPFSA-WAFLSTTLFGIILIFYVDAMAEERL 276
              V+  FS    F +   F +IL FY+D++   ++
Sbjct:   261 KVESWFSLIMPFTTVIFFVMILDFYMDSVCSVKM 294

GO:0005385 "zinc ion transmembrane transporter activity" evidence=ISO;ISA

GO:0005794 "Golgi apparatus" evidence=ISO;ISA

GO:0006810 "transport" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0006824 "cobalt ion transport" evidence=ISA

GO:0006829 "zinc ion transport" evidence=ISO;ISA

GO:0006882 "cellular zinc ion homeostasis" evidence=ISO

GO:0008324 "cation transmembrane transporter activity" evidence=IEA

GO:0010043 "response to zinc ion" evidence=ISO

GO:0016020 "membrane" evidence=ISA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016324 "apical plasma membrane" evidence=ISO;ISA

GO:0030141 "secretory granule" evidence=ISA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0071577 "zinc ion transmembrane transport" evidence=ISO;ISA

ZFIN|ZDB-GENE-040718-6 slc30a5 "solute carrier family 30 (zinc transporter), member 5" [Danio rerio (taxid:7955)]

 Score = 166 (63.5 bits), Expect = 4.0e-09, P = 4.0e-09
 Identities = 68/277 (24%), Positives = 132/277 (47%)

Query:    15 NFRHTPLQILHIIASFLRIWSVYSMYRYLSQTGVSVILFIFCCLVPSSILFLLLQKPWK- 73
             N R T   +L      L+ + ++  Y  L    V ++ F+F   +  +++ +  QKP+  
Sbjct:    22 NARLTRYIVLLYFTKMLKAFGIFESYDILKV--VHIVQFLFILKMGCAVILVFFQKPFSS 79

Query:    74 GRPLLNTQMVPSVINGGITALYFILWGKGLKSCGPVRALLA-EYSGAVLGVLSAVLYGRR 132
             G+ +   Q +  + +  I+ +  +L   GL  CGP+R+LL  E+S  V+  L +VL+   
Sbjct:    80 GKMIPKRQWIKILKHAVISCIISLLGFFGLTLCGPLRSLLLFEHSDLVVISLLSVLFTSS 139

Query:   133 GHVWKKVGG----LIAILASFYFLSQG-WATETSSPFSFKDS-LDAELRTE-QVLGMKE- 184
             G    K  G    +IA++    F +    A     P    DS L   L T    LG+ + 
Sbjct:   140 GGGPSKTRGAAFFIIAVICLLLFDNDDLMAKMAEHPEGHHDSALTHALYTGIAFLGVADH 199

Query:   185 ---MVVPLLAGILSALRRVIARRVSLKITLKRRLHAITITSATCFLFPVAMWDLIIGSKS 241
                +V+ +LA  L       +R++S++I   +RL+A++   +   L P   W +++ + +
Sbjct:   200 KGGVVLLVLALCLKVAFNTASRKLSVEIGGAKRLYALSNLVSAVVLLP---WVIVLSATT 256

Query:   242 SSSVDLPFSAWAF-LSTTLFGIILI-FYVDAMAEERL 276
              S V+  +S   F  +  +F ++++ FYV+++   +L
Sbjct:   257 ESKVE-SWSGLIFPFAMIIFSVMILDFYVESICMAKL 292

GO:0008324 "cation transmembrane transporter activity" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0010043 "response to zinc ion" evidence=IDA

GO:0006810 "transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006829 "zinc ion transport" evidence=IEA;ISS

GO:0005385 "zinc ion transmembrane transporter activity" evidence=ISS

UNIPROTKB|F1N8U2 SLC30A5 "Zinc transporter 5" [Gallus gallus (taxid:9031)]

 Score = 163 (62.4 bits), Expect = 8.2e-09, P = 8.2e-09
 Identities = 67/263 (25%), Positives = 122/263 (46%)

Query:    28 ASFLRIWSVYSMYRYLSQTGVSVILFIFCCLVPSSILFLLLQKPWK-GRPLLNTQMVPSV 86
             A FL+   ++  Y  L    V ++ FIF   + S+   +L QKP+  G+ +   Q +   
Sbjct:     3 AKFLKAVGLFESYYVLK--AVHLVQFIFIVKLGSAFFMVLFQKPFSSGKVVTKHQWIKIF 60

Query:    87 INGGITALYFILWGKGLKSCGPVRALLA-EYSGAVLGVLSAVLYGRRGHVWKKVGG---- 141
              +  +  +  +LW  GL  CGP+R LL  E+S  V+  L +VL+   G    K  G    
Sbjct:    61 KHAVVGCIISLLWFFGLTLCGPLRTLLLFEHSDVVVLSLLSVLFTSSGGGPAKTRGAAFF 120

Query:   142 LIAILASFYFLSQGWATETSS-PFSFKDS-LDAELRTE-QVLGMKEMVVPLLAGILSALR 198
             +IA++    F +     + +  P    DS L   L T    LG+ +    +L  +L+   
Sbjct:   121 IIAVICLLLFDNDDLMAKIAEHPEGHHDSALTHVLYTVIAFLGVADHKGGVLLLVLALCC 180

Query:   199 RV----IARRVSLKITLKRRLHAITITSATCFLFPVAMWDLIIGSKSSSSVDLPFSA-WA 253
             +V     +R++S+ +   +RL A++   +   L P   W +++   + S V+   S    
Sbjct:   181 KVGFHMASRKLSVDVGGAKRLQALSHLVSVLLLCP---WVIVLSLTTESKVESWSSLIMP 237

Query:   254 FLSTTLFGIILIFYVDAMAEERL 276
             F++   F +IL FYV+++   ++
Sbjct:   238 FITVIFFVVILDFYVESICSVKM 260

GO:0008324 "cation transmembrane transporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	355
PLN00411	358	nodulin MtN21 family protein; Provisional	99.86
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.74
PRK11272	292	putative DMT superfamily transporter inner membran	99.71
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.7
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.7
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.7
PRK11689	295	aromatic amino acid exporter; Provisional	99.65
PRK15430	296	putative chloramphenical resistance permease RarD;	99.61
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.57
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.55
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.43
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.38
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.03
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	98.88
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	98.67
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	98.37
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.3
COG2962	293	RarD Predicted permeases [General function predict	98.08
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.06
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	97.95
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	97.73
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.32
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	97.3
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	97.04
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	96.94
PRK11689	295	aromatic amino acid exporter; Provisional	96.8
PRK11272	292	putative DMT superfamily transporter inner membran	96.66
COG2510	140	Predicted membrane protein [Function unknown]	96.62
PLN00411	358	nodulin MtN21 family protein; Provisional	96.6
KOG2765	416	consensus Predicted membrane protein [Function unk	96.5
PRK10532	293	threonine and homoserine efflux system; Provisiona	96.3
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	96.28
PRK15430	296	putative chloramphenical resistance permease RarD;	96.08
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	95.92
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	95.67
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	95.39
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	95.39
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	94.86
COG0697	292	RhaT Permeases of the drug/metabolite transporter	94.47
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	94.33
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	94.25
KOG1581	327	consensus UDP-galactose transporter related protei	93.83
KOG1580	337	consensus UDP-galactose transporter related protei	93.79
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	93.69
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	93.2
KOG4510	346	consensus Permease of the drug/metabolite transpor	92.92
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	92.0
PF13536	113	EmrE: Multidrug resistance efflux transporter	91.72
COG2510	140	Predicted membrane protein [Function unknown]	91.39
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	90.11
KOG3912	372	consensus Predicted integral membrane protein [Gen	89.88
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	89.5
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	89.05
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	88.7
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	88.46
PRK09541	110	emrE multidrug efflux protein; Reviewed	87.85
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	86.18
PRK11431	105	multidrug efflux system protein; Provisional	83.54
PRK10650	109	multidrug efflux system protein MdtI; Provisional	82.62
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	81.85

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.86  E-value=2.7e-19  Score=177.40  Aligned_cols=273  Identities=9%  Similarity=0.110  Sum_probs=202.2

Q ss_pred             CCchhhHHHHHHHHHHHHHHHHhcCCC-CCCCCcccchhhHHHHHHHHHHHHHHHHhcccccchhhHHH-hhhhhhHHHH
Q 018509           46 TGVSVILFIFCCLVPSSILFLLLQKPW-KGRPLLNTQMVPSVINGGITALYFILWGKGLKSCGPVRALL-AEYSGAVLGV  123 (355)
Q Consensus        46 ~p~~lv~f~Fl~~l~ss~~~l~~qkP~-~g~~l~~~Qw~~il~~gvv~~l~~lLwf~gL~~cGplrsiL-~e~s~~Vl~~  123 (355)
                      +|..++.+||.++....+++.+.+|+. .-++.++++|.++...|++++++..+++.|++|+.|-++.+ ...+|..+.+
T Consensus        41 ~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~l  120 (358)
T PLN00411         41 NIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFI  120 (358)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHH
Confidence            778999999999988888887766432 12334567889999999999888889999999999999999 9999999999


Q ss_pred             HHHHH------hCCCCCcchhhHHHHHHHHHHHHhhcc-cccccc--cCCc-cCCcchHh-hhhhhhhccchhHHHHHHH
Q 018509          124 LSAVL------YGRRGHVWKKVGGLIAILASFYFLSQG-WATETS--SPFS-FKDSLDAE-LRTEQVLGMKEMVVPLLAG  192 (355)
Q Consensus       124 Ls~lf------~g~~~~~~k~rG~~l~~igvl~lLs~g-w~~~~~--~pf~-lfd~d~~~-~~~~~~lG~~Dv~Lli~a~  192 (355)
                      ++.+|      .+|+.+++|..|.++.+.|+..++..+ .....+  .++. .+..++.. ....+.. .+|. +.+.|.
T Consensus       121 la~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lG~~-l~l~aa  198 (358)
T PLN00411        121 LAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSNSDWL-IGGA-LLTIQG  198 (358)
T ss_pred             HHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccccccccccccccCCCcccHH-HHHH-HHHHHH
Confidence            99999      599999999999999999999887543 322111  1100 00000000 0000111 2333 788999


Q ss_pred             HHHHHHHHHhhhhhhhcccchhHHHHHHHHHHHHHhHHHHHHhhhccCCCCC-Ccch-hHHHHHHHHHHHHHHHHHHHHH
Q 018509          193 ILSALRRVIARRVSLKITLKRRLHAITITSATCFLFPVAMWDLIIGSKSSSS-VDLP-FSAWAFLSTTLFGIILIFYVDA  270 (355)
Q Consensus       193 ~l~a~~~~~sRr~s~~~gg~kRL~Alt~l~stv~L~P~al~~~~~~~~s~~s-~~~~-~~~w~~l~~~vF~~VL~fyves  270 (355)
                      ++|+.|-+..||+..++......+++..+++++...+++++..   +.+... ...+ ...|..++.+++ ..+.|+.++
T Consensus       199 ~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~i~y~~i~-t~lay~lw~  274 (358)
T PLN00411        199 IFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVE---KNNPSVWIIHFDITLITIVTMAII-TSVYYVIHS  274 (358)
T ss_pred             HHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHc---cCCcccceeccchHHHHHHHHHHH-HHHHHHHHH
Confidence            9999999999999888755556677776766666666555421   111011 0001 122333666665 568999999


Q ss_pred             HHhhhhcccccCcchhhhhHHHHHHHHHHhccccchHHHHHHHHHHhhhhhcccc
Q 018509          271 MAEERLHMVFSSPRHLMVAGGCIIVMEMVYKMDFSLIGFIICSLILGFGIYEATS  325 (355)
Q Consensus       271 i~~~rl~~~~ss~r~~lV~~~c~iv~e~~~~~~~sl~g~lic~~ll~~gv~~~t~  325 (355)
                      .+.+|+++++++.+.+++|.++++...++++|.+++.+ ++|++++..|++..+.
T Consensus       275 ~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~-~iG~~LIl~Gv~l~~~  328 (358)
T PLN00411        275 WTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGC-LIGGILITLGFYAVMW  328 (358)
T ss_pred             HHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHH-HHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999 9999999999998875

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.74  E-value=2e-16  Score=150.83  Aligned_cols=261  Identities=12%  Similarity=-0.025  Sum_probs=192.0

Q ss_pred             CCchhhHHHHHHHHHHHHHHHHhcCCCCCCCCcccchhhHHHHHHHHHHHHHHHHhcccccchhhHHH-hhhhhhHHHHH
Q 018509           46 TGVSVILFIFCCLVPSSILFLLLQKPWKGRPLLNTQMVPSVINGGITALYFILWGKGLKSCGPVRALL-AEYSGAVLGVL  124 (355)
Q Consensus        46 ~p~~lv~f~Fl~~l~ss~~~l~~qkP~~g~~l~~~Qw~~il~~gvv~~l~~lLwf~gL~~cGplrsiL-~e~s~~Vl~~L  124 (355)
                      .|..++..+|.++.....++.....+ +.+++++++|++++..|++++++..+++.|++|..+-++.+ ...+|....++
T Consensus        30 ~P~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll  108 (302)
T TIGR00817        30 YPYFKTLISLAVGSLYCLLSWSSGLP-KRLKISSALLKLLLPVAIVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVL  108 (302)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHH
Confidence            57788888888876554443111112 23567889999999999999999999999999999998888 99999999999


Q ss_pred             HHHHhCCCCCcchhhHHHHHHHHHHHHhhcccccccccCCccCCcchHhhhhhhhhccchhHHHHHHHHHHHHHHHHhhh
Q 018509          125 SAVLYGRRGHVWKKVGGLIAILASFYFLSQGWATETSSPFSFKDSLDAELRTEQVLGMKEMVVPLLAGILSALRRVIARR  204 (355)
Q Consensus       125 s~lf~g~~~~~~k~rG~~l~~igvl~lLs~gw~~~~~~pf~lfd~d~~~~~~~~~lG~~Dv~Lli~a~~l~a~~~~~sRr  204 (355)
                      +.++++|+.++++..|.++.+.|+.... .     ...+++             .  .+|+ +.++|.++++.|.+..||
T Consensus       109 ~~~~~~e~~~~~~~~~l~l~~~Gv~l~~-~-----~~~~~~-------------~--~G~~-~~l~a~~~~a~~~v~~k~  166 (302)
T TIGR00817       109 SAFFLGQEFPSTLWLSLLPIVGGVALAS-D-----TELSFN-------------W--AGFL-SAMISNITFVSRNIFSKK  166 (302)
T ss_pred             HHHHhCCCCcHHHHHHHHHHHHHHhhhc-C-----Cccccc-------------H--HHHH-HHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999996542 0     001111             1  3665 788899999999999999


Q ss_pred             hhh--hcccchhHHHHHHHHHHHHHhHHHHHHh-hhccCCCCCC----cchhHHHHH-HHHHHHHHHHHHHHHHHHhhhh
Q 018509          205 VSL--KITLKRRLHAITITSATCFLFPVAMWDL-IIGSKSSSSV----DLPFSAWAF-LSTTLFGIILIFYVDAMAEERL  276 (355)
Q Consensus       205 ~s~--~~gg~kRL~Alt~l~stv~L~P~al~~~-~~~~~s~~s~----~~~~~~w~~-l~~~vF~~VL~fyvesi~~~rl  276 (355)
                      ...  +. ++-.+..+....+++++.|++.+.. ......+...    ......|.. +........+.++.+..+.+|.
T Consensus       167 ~~~~~~~-~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  245 (302)
T TIGR00817       167 AMTIKSL-DKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRV  245 (302)
T ss_pred             hhccCCC-CcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence            987  44 6788999999999999999986421 1000000000    000111221 1111111222224555789999


Q ss_pred             cccccCcchhhhhHHHHHHHHHHhccccchHHHHHHHHHHhhhhhcccccCCCCC
Q 018509          277 HMVFSSPRHLMVAGGCIIVMEMVYKMDFSLIGFIICSLILGFGIYEATSLDHGRK  331 (355)
Q Consensus       277 ~~~~ss~r~~lV~~~c~iv~e~~~~~~~sl~g~lic~~ll~~gv~~~t~~~~~~~  331 (355)
                      ++.+.+...++.|+++++...+++||++|..+ ++|+.++..|++..+..+.+||
T Consensus       246 sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~-~~G~~lil~Gv~l~~~~k~~~~  299 (302)
T TIGR00817       246 SPLTHSVGNCMKRVVVIVVSILFFGTKISPQQ-VFGTGIAIAGVFLYSRVKAQKP  299 (302)
T ss_pred             CchHHHHHhhhhhhheeeeehhhcCCCCchhH-HHHHHHHHHHHHHHHHHhccCc
Confidence            99999999999999999999999999999999 9999999999998876554444

specificities overlap.

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.71  E-value=4.9e-15  Score=141.25  Aligned_cols=277  Identities=12%  Similarity=-0.004  Sum_probs=206.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHhHhh-hhccCCchhhHHHHHHHHHHHHHHHHhcCCCCCCCCcccchhhHHHHHHHHH-HHH
Q 018509           19 TPLQILHIIASFLRIWSVYSMYR-YLSQTGVSVILFIFCCLVPSSILFLLLQKPWKGRPLLNTQMVPSVINGGITA-LYF   96 (355)
Q Consensus        19 ~~~~~~l~~~k~lr~~~i~~~y~-~l~~~p~~lv~f~Fl~~l~ss~~~l~~qkP~~g~~l~~~Qw~~il~~gvv~~-l~~   96 (355)
                      -|.+..++..-++-.-+--..=. .-..+|..++.+||.++....+++...+|..   ..++++|......|..+. ++.
T Consensus         7 ~~~~~~~~~~~~iWg~~~~~~K~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~   83 (292)
T PRK11272          7 LPLFGALFALYIIWGSTYLVIRIGVESWPPLMMAGVRFLIAGILLLAFLLLRGHP---LPTLRQWLNAALIGLLLLAVGN   83 (292)
T ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHhCCC---CCcHHHHHHHHHHHHHHHHHHH
Confidence            46666666654443221111111 1123789999999999988877777666533   235778998888888874 777


Q ss_pred             HHHHhcc-cccchhhHHH-hhhhhhHHHHHHHHHhCCCCCcchhhHHHHHHHHHHHHhhcccccccccCCccCCcchHhh
Q 018509           97 ILWGKGL-KSCGPVRALL-AEYSGAVLGVLSAVLYGRRGHVWKKVGGLIAILASFYFLSQGWATETSSPFSFKDSLDAEL  174 (355)
Q Consensus        97 lLwf~gL-~~cGplrsiL-~e~s~~Vl~~Ls~lf~g~~~~~~k~rG~~l~~igvl~lLs~gw~~~~~~pf~lfd~d~~~~  174 (355)
                      .+.+.+. ++.++-.+.+ ...+|....+++.+ .||+.+.+|..|.++.++|++.+.              .|++.   
T Consensus        84 ~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~--------------~~~~~---  145 (292)
T PRK11272         84 GMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLN--------------SGGNL---  145 (292)
T ss_pred             HHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHh--------------cCccc---
Confidence            8888898 7777766777 88899988888876 599999999999999999988764              11100   


Q ss_pred             hhhhhhccchhHHHHHHHHHHHHHHHHhhhhhhhcccchhHHHHHHHHHHHHHhHHHHHHhhhccCCCCCCcchhHHHHH
Q 018509          175 RTEQVLGMKEMVVPLLAGILSALRRVIARRVSLKITLKRRLHAITITSATCFLFPVAMWDLIIGSKSSSSVDLPFSAWAF  254 (355)
Q Consensus       175 ~~~~~lG~~Dv~Lli~a~~l~a~~~~~sRr~s~~~gg~kRL~Alt~l~stv~L~P~al~~~~~~~~s~~s~~~~~~~w~~  254 (355)
                         +....+|. ..+++.++++.|.+..||...+.  +....++...+++.++.|++....   +. ..... ....|..
T Consensus       146 ---~~~~~G~l-~~l~a~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~-~~~~~~~  214 (292)
T PRK11272        146 ---SGNPWGAI-LILIASASWAFGSVWSSRLPLPV--GMMAGAAEMLAAGVVLLIASLLSG---ER-LTALP-TLSGFLA  214 (292)
T ss_pred             ---ccchHHHH-HHHHHHHHHHHHHHHHHhcCCCc--chHHHHHHHHHHHHHHHHHHHHcC---Cc-ccccC-CHHHHHH
Confidence               00013555 78889999999999999986432  345667888888888888875431   11 11101 1344666


Q ss_pred             -HHHHHHHHHHHHHHHHHHhhhhcccccCcchhhhhHHHHHHHHHHhccccchHHHHHHHHHHhhhhhcccccCC
Q 018509          255 -LSTTLFGIILIFYVDAMAEERLHMVFSSPRHLMVAGGCIIVMEMVYKMDFSLIGFIICSLILGFGIYEATSLDH  328 (355)
Q Consensus       255 -l~~~vF~~VL~fyvesi~~~rl~~~~ss~r~~lV~~~c~iv~e~~~~~~~sl~g~lic~~ll~~gv~~~t~~~~  328 (355)
                       ++.+++++++.|+.++.+.+|+++.+.+...++.|.++++...++++|.+|+.+ .+|+.+++.|++..+..++
T Consensus       215 i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~-iiG~~lIi~gv~~~~~~~~  288 (292)
T PRK11272        215 LGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIE-WLALGVIVFAVVLVTLGKY  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHH-HHHHHHHHHHHHHHHHHHh
Confidence             999999999999999999999999999999999999999999999999999999 9999999999998775444

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.70  E-value=2e-15  Score=139.14  Aligned_cols=239  Identities=14%  Similarity=0.139  Sum_probs=187.1

Q ss_pred             CCchhhHHHHHHHHHHHHHHHHhcCCCCCCCCcccchhhHHHHHHHHH-HHHHHHHhcccccchhhHHH-hhhhhhHHHH
Q 018509           46 TGVSVILFIFCCLVPSSILFLLLQKPWKGRPLLNTQMVPSVINGGITA-LYFILWGKGLKSCGPVRALL-AEYSGAVLGV  123 (355)
Q Consensus        46 ~p~~lv~f~Fl~~l~ss~~~l~~qkP~~g~~l~~~Qw~~il~~gvv~~-l~~lLwf~gL~~cGplrsiL-~e~s~~Vl~~  123 (355)
                      +|..++..|++...+...++.. +|      .+++||.+.+..|.++. ++..++++|+++.++-++.+ ...+|..+.+
T Consensus        17 ~~~~~~~~r~~~~~l~l~~~~~-~~------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~   89 (260)
T TIGR00950        17 PLYFAVFRRLIFALLLLLPLLR-RR------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTL   89 (260)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHH-hc------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHH
Confidence            3345555555555444443332 22      35678888888888875 99999999999999888888 8899999999


Q ss_pred             HHHHHhCCCCCcchhhHHHHHHHHHHHHhhcccccccccCCccCCcchHhhhhhhhhccchhHHHHHHHHHHHHHHHHhh
Q 018509          124 LSAVLYGRRGHVWKKVGGLIAILASFYFLSQGWATETSSPFSFKDSLDAELRTEQVLGMKEMVVPLLAGILSALRRVIAR  203 (355)
Q Consensus       124 Ls~lf~g~~~~~~k~rG~~l~~igvl~lLs~gw~~~~~~pf~lfd~d~~~~~~~~~lG~~Dv~Lli~a~~l~a~~~~~sR  203 (355)
                      ++.++.+||.+++|..|.++.++|+.++...|             +++     .+  ..+++ +.+++.++++.+....|
T Consensus        90 ~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~-------------~~~-----~~--~~G~~-~~l~a~~~~a~~~~~~k  148 (260)
T TIGR00950        90 LSDLMGKERPRKLVLLAAVLGLAGAVLLLSDG-------------NLS-----IN--PAGLL-LGLGSGISFALGTVLYK  148 (260)
T ss_pred             HHHHHccCCCcHHHHHHHHHHHHhHHhhccCC-------------ccc-----cc--HHHHH-HHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999986222             000     01  13444 88999999999999999


Q ss_pred             hhhhhccc-chhHHHHHHHHHHHHHhHHHHHHhhhccCCCCCCcchhHHHHH-HHHHHHHHHHHHHHHHHHhhhhccccc
Q 018509          204 RVSLKITL-KRRLHAITITSATCFLFPVAMWDLIIGSKSSSSVDLPFSAWAF-LSTTLFGIILIFYVDAMAEERLHMVFS  281 (355)
Q Consensus       204 r~s~~~gg-~kRL~Alt~l~stv~L~P~al~~~~~~~~s~~s~~~~~~~w~~-l~~~vF~~VL~fyvesi~~~rl~~~~s  281 (355)
                      +...+.+. +-..+++...+++++++|+.....   +....    ....|.. ++..+++.++.|.....+.++.+..+.
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~  221 (260)
T TIGR00950       149 RLVKKEGPELLQFTGWVLLLGALLLLPFAWFLG---PNPQA----LSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAA  221 (260)
T ss_pred             HHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcC---CCCCc----chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHH
Confidence            99876632 234555678899999999876532   11111    2345655 888999999999999999999999999


Q ss_pred             CcchhhhhHHHHHHHHHHhccccchHHHHHHHHHHhhhh
Q 018509          282 SPRHLMVAGGCIIVMEMVYKMDFSLIGFIICSLILGFGI  320 (355)
Q Consensus       282 s~r~~lV~~~c~iv~e~~~~~~~sl~g~lic~~ll~~gv  320 (355)
                      +...++.|.+.++...++++|+++..+ .++++++..|+
T Consensus       222 s~~~~~~pv~~~ll~~~~~~E~~~~~~-~~G~~li~~g~  259 (260)
T TIGR00950       222 SILALAEPLVALLLGLLILGETLSLPQ-LIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCCHHH-HHHHHHHHHhc
Confidence            999999999999999999999999999 99999988886

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.70  E-value=9.8e-15  Score=139.46  Aligned_cols=246  Identities=15%  Similarity=0.077  Sum_probs=185.4

Q ss_pred             cCCchhhHHHHHHHHHHHHHHHHhcCCCCCCCCcccchhhHHHHHHHHHHHHHHHHhcccccchhhHHH-hhhhhhHHHH
Q 018509           45 QTGVSVILFIFCCLVPSSILFLLLQKPWKGRPLLNTQMVPSVINGGITALYFILWGKGLKSCGPVRALL-AEYSGAVLGV  123 (355)
Q Consensus        45 ~~p~~lv~f~Fl~~l~ss~~~l~~qkP~~g~~l~~~Qw~~il~~gvv~~l~~lLwf~gL~~cGplrsiL-~e~s~~Vl~~  123 (355)
                      .+|..++.+||+++.+..+++..   +. .++.++++|...+..|........+++.|+++.++-.+.. .-.+|....+
T Consensus        38 ~~~~~~~~~R~~~a~l~l~~~~~---~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~l  113 (293)
T PRK10532         38 VGAPGVTALRLALGTLILIAIFK---PW-RLRFAKEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVAL  113 (293)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHh---HH-hccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence            47788999999998766654432   22 2245678898888888888888999999999998887766 6677875555


Q ss_pred             HHHHHhCCCCCcchhhHHHHHHHHHHHHhhcccccccccCCccCCcchHhhhhhhhhccchhHHHHHHHHHHHHHHHHhh
Q 018509          124 LSAVLYGRRGHVWKKVGGLIAILASFYFLSQGWATETSSPFSFKDSLDAELRTEQVLGMKEMVVPLLAGILSALRRVIAR  203 (355)
Q Consensus       124 Ls~lf~g~~~~~~k~rG~~l~~igvl~lLs~gw~~~~~~pf~lfd~d~~~~~~~~~lG~~Dv~Lli~a~~l~a~~~~~sR  203 (355)
                      ++    ++  .+.|..+..+.++|+.+++..|.+.      +   +       .+  ..+|. +.+++.++++.|.+..|
T Consensus       114 l~----~~--~~~~~~~~~i~~~Gv~li~~~~~~~------~---~-------~~--~~G~l-l~l~aa~~~a~~~v~~r  168 (293)
T PRK10532        114 FS----SR--RPVDFVWVVLAVLGLWFLLPLGQDV------S---H-------VD--LTGAA-LALGAGACWAIYILSGQ  168 (293)
T ss_pred             Hh----cC--ChHHHHHHHHHHHHHheeeecCCCc------c---c-------CC--hHHHH-HHHHHHHHHHHHHHHHH
Confidence            43    23  3566778888888887765222110      0   0       00  13554 88999999999999999


Q ss_pred             hhhhhcccchhHHHHHHHHHHHHHhHHHHHHhhhccCCCCCCcchhHHHHH-HHHHHHHHHHHHHHHHHHhhhhcccccC
Q 018509          204 RVSLKITLKRRLHAITITSATCFLFPVAMWDLIIGSKSSSSVDLPFSAWAF-LSTTLFGIILIFYVDAMAEERLHMVFSS  282 (355)
Q Consensus       204 r~s~~~gg~kRL~Alt~l~stv~L~P~al~~~~~~~~s~~s~~~~~~~w~~-l~~~vF~~VL~fyvesi~~~rl~~~~ss  282 (355)
                      |...+.. +. ..++...++++++.|++.+...   ....+    ...|.. +++.+++.++.|+.++.+.+|.++.+.+
T Consensus       169 ~~~~~~~-~~-~~~~~~~~~~~~l~~~~~~~~~---~~~~~----~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as  239 (293)
T PRK10532        169 RAGAEHG-PA-TVAIGSLIAALIFVPIGALQAG---EALWH----WSILPLGLAVAILSTALPYSLEMIALTRLPTRTFG  239 (293)
T ss_pred             HHhccCC-ch-HHHHHHHHHHHHHHHHHHHccC---cccCC----HHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHH
Confidence            9976653 33 3467778888899998876431   11111    334655 8999999999999999999999999999


Q ss_pred             cchhhhhHHHHHHHHHHhccccchHHHHHHHHHHhhhhhcccccCCC
Q 018509          283 PRHLMVAGGCIIVMEMVYKMDFSLIGFIICSLILGFGIYEATSLDHG  329 (355)
Q Consensus       283 ~r~~lV~~~c~iv~e~~~~~~~sl~g~lic~~ll~~gv~~~t~~~~~  329 (355)
                      ...++.|.++++...++++|.++..+ ++++.+++.|+...+..+|+
T Consensus       240 ~~~~l~Pv~a~l~~~l~lgE~~~~~~-~iG~~lIl~~~~~~~~~~~~  285 (293)
T PRK10532        240 TLMSMEPALAAVSGMIFLGETLTLIQ-WLALGAIIAASMGSTLTIRR  285 (293)
T ss_pred             HHHHhHHHHHHHHHHHHhCCCCcHHH-HHHHHHHHHHHHHHHhcCCC
Confidence            99999999999999999999999999 88998888888877765544

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.70  E-value=3.9e-15  Score=142.41  Aligned_cols=257  Identities=14%  Similarity=0.116  Sum_probs=179.1

Q ss_pred             cCCchhhHHHHHHHHHHHHHHHHhcCCCCCCCCcccchhhHHHHHHHHH-HHHHHHHhccccc-chhhHHH-hhhhhhHH
Q 018509           45 QTGVSVILFIFCCLVPSSILFLLLQKPWKGRPLLNTQMVPSVINGGITA-LYFILWGKGLKSC-GPVRALL-AEYSGAVL  121 (355)
Q Consensus        45 ~~p~~lv~f~Fl~~l~ss~~~l~~qkP~~g~~l~~~Qw~~il~~gvv~~-l~~lLwf~gL~~c-GplrsiL-~e~s~~Vl  121 (355)
                      .+|..++.+||.++....+++  .++|.       ..|...+..|+.+. .+..+.+.+++|. ++-++.+ ...+|..+
T Consensus        30 ~~p~~~~~~R~~~a~~~l~~~--~~~~~-------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~  100 (299)
T PRK11453         30 MPPLMLAGLRFMLVAFPAIFF--VARPK-------VPLNLLLGYGLTISFGQFAFLFCAINFGMPAGLASLVLQAQAFFT  100 (299)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH--hcCCC-------CchHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHH
Confidence            478999999998865443332  22221       22345555566554 5666888999985 3345554 88999988


Q ss_pred             HHHHHHHhCCCCCcchhhHHHHHHHHHHHHhhcccccccccCCccCCcchHhhhhhhhhccchhHHHHHHHHHHHHHHHH
Q 018509          122 GVLSAVLYGRRGHVWKKVGGLIAILASFYFLSQGWATETSSPFSFKDSLDAELRTEQVLGMKEMVVPLLAGILSALRRVI  201 (355)
Q Consensus       122 ~~Ls~lf~g~~~~~~k~rG~~l~~igvl~lLs~gw~~~~~~pf~lfd~d~~~~~~~~~lG~~Dv~Lli~a~~l~a~~~~~  201 (355)
                      .+++.++++|+.+.++..|.++.++|+++++.++.             ++   ...+.  .+|. +.+++.++++.|.+.
T Consensus       101 ~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~-------------~~---~~~~~--~G~~-l~l~aal~~a~~~v~  161 (299)
T PRK11453        101 IVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSL-------------NG---QHVAM--LGFM-LTLAAAFSWACGNIF  161 (299)
T ss_pred             HHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccC-------------CC---cchhH--HHHH-HHHHHHHHHHHHHHH
Confidence            89999999999999999999999999988861111             00   00112  3555 889999999999999


Q ss_pred             hhhhhhhcccchhHHHHHHHHHHHHHhHHHHHHhhhccCCC--CC-CcchhHHHHH-HHHHHHHHHHHHHHHHHHhhhhc
Q 018509          202 ARRVSLKITLKRRLHAITITSATCFLFPVAMWDLIIGSKSS--SS-VDLPFSAWAF-LSTTLFGIILIFYVDAMAEERLH  277 (355)
Q Consensus       202 sRr~s~~~gg~kRL~Alt~l~stv~L~P~al~~~~~~~~s~--~s-~~~~~~~w~~-l~~~vF~~VL~fyvesi~~~rl~  277 (355)
                      .||+..+...+.-+ .+....+++...|+............  +. .......|.. ++..++++++.|+.++.+.+|++
T Consensus       162 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~  240 (299)
T PRK11453        162 NKKIMSHSTRPAVM-SLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYE  240 (299)
T ss_pred             HHHHhcccCccchh-HHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            99987654333222 22222222223344332221111110  00 0011234555 99999999999999999999999


Q ss_pred             ccccCcchhhhhHHHHHHHHHHhccccchHHHHHHHHHHhhhhhcccccCCCCC
Q 018509          278 MVFSSPRHLMVAGGCIIVMEMVYKMDFSLIGFIICSLILGFGIYEATSLDHGRK  331 (355)
Q Consensus       278 ~~~ss~r~~lV~~~c~iv~e~~~~~~~sl~g~lic~~ll~~gv~~~t~~~~~~~  331 (355)
                      +.+.+.-..++|+++++...++++|.++..+ .+|+.++..|++......|.||
T Consensus       241 a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~-~iG~~lI~~gv~l~~~~~~~~~  293 (299)
T PRK11453        241 TWRVAPLSLLVPVVGLASAALLLDERLTGLQ-FLGAVLIMAGLYINVFGLRWRK  293 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCccHHH-HHHHHHHHHHHHHHhcchhhhc
Confidence            9999999999999999999999999999999 9999999999998766555444

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.65  E-value=2.3e-14  Score=137.02  Aligned_cols=256  Identities=9%  Similarity=-0.012  Sum_probs=178.7

Q ss_pred             CCchhhHHHHHHHHHHHHHHHHhcCCCCCCCCcccchhhHHHHHHHHHHHHHHHHhccccc----chhhHHH-hhhhhhH
Q 018509           46 TGVSVILFIFCCLVPSSILFLLLQKPWKGRPLLNTQMVPSVINGGITALYFILWGKGLKSC----GPVRALL-AEYSGAV  120 (355)
Q Consensus        46 ~p~~lv~f~Fl~~l~ss~~~l~~qkP~~g~~l~~~Qw~~il~~gvv~~l~~lLwf~gL~~c----GplrsiL-~e~s~~V  120 (355)
                      +|..++.+||..+.+..+++.  ++|.    .+++.|+.++.-++..+.++.+.+.|++|.    .+.++.+ ...+|..
T Consensus        31 ~P~~~~~~R~~~a~l~l~~~~--~~~~----~~~~~~~~~~~~~l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~  104 (295)
T PRK11689         31 GPVGGAAMIYSVSGLLLLLTV--GFPR----LRQFPKRYLLAGGLLFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSL  104 (295)
T ss_pred             ChHHHHHHHHHHHHHHHHHHc--cccc----cccccHHHHHHHhHHHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHH
Confidence            789999999988877665442  2222    233333444443444448888888888763    4556666 8889998


Q ss_pred             HHHHHHHHhCCCCCcchhhHHHHHHHHHHHHhhcccccccccCCccCCcchHhhhhhhhhccchhHHHHHHHHHHHHHHH
Q 018509          121 LGVLSAVLYGRRGHVWKKVGGLIAILASFYFLSQGWATETSSPFSFKDSLDAELRTEQVLGMKEMVVPLLAGILSALRRV  200 (355)
Q Consensus       121 l~~Ls~lf~g~~~~~~k~rG~~l~~igvl~lLs~gw~~~~~~pf~lfd~d~~~~~~~~~lG~~Dv~Lli~a~~l~a~~~~  200 (355)
                      ..+++.++.+||.+++|..|.++.++|+++++.++-      +   .+.++. +.....-..+|. +.++|.++++.|.+
T Consensus       105 ~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~------~---~~~~~~-~~~~~~~~~G~~-~~l~aa~~~A~~~v  173 (295)
T PRK11689        105 TILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDN------G---LSLAEL-INNIASNPLSYG-LAFIGAFIWAAYCN  173 (295)
T ss_pred             HHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCc------c---chhhhh-hhccccChHHHH-HHHHHHHHHHHHHH
Confidence            888999999999999999999999999988862210      0   000000 000000013555 89999999999999


Q ss_pred             HhhhhhhhcccchhHHHHHHHHHHHHHhHHHHHHhhhccCCCCCCcchhHHHHH-HHHHHHHHHHHHHHHHHHhhhhccc
Q 018509          201 IARRVSLKITLKRRLHAITITSATCFLFPVAMWDLIIGSKSSSSVDLPFSAWAF-LSTTLFGIILIFYVDAMAEERLHMV  279 (355)
Q Consensus       201 ~sRr~s~~~gg~kRL~Alt~l~stv~L~P~al~~~~~~~~s~~s~~~~~~~w~~-l~~~vF~~VL~fyvesi~~~rl~~~  279 (355)
                      ..||+..+.+ +.  + +....+.+++.+....+.    ....+  .....|.. ++.. ++.++.|+.++.+.+|.++.
T Consensus       174 ~~k~~~~~~~-~~--~-~~~~~~~~~l~~~~~~~~----~~~~~--~~~~~~~~l~~~~-~~t~~~~~l~~~al~~~~a~  242 (295)
T PRK11689        174 VTRKYARGKN-GI--T-LFFILTALALWIKYFLSP----QPAMV--FSLPAIIKLLLAA-AAMGFGYAAWNVGILHGNMT  242 (295)
T ss_pred             HHhhccCCCC-ch--h-HHHHHHHHHHHHHHHHhc----Ccccc--CCHHHHHHHHHHH-HHHHHHHHHHHHHHHccCHH
Confidence            9999976653 32  2 223334444444333321    11111  12345666 6555 57899999999999999999


Q ss_pred             ccCcchhhhhHHHHHHHHHHhccccchHHHHHHHHHHhhhhhcccccCCCC
Q 018509          280 FSSPRHLMVAGGCIIVMEMVYKMDFSLIGFIICSLILGFGIYEATSLDHGR  330 (355)
Q Consensus       280 ~ss~r~~lV~~~c~iv~e~~~~~~~sl~g~lic~~ll~~gv~~~t~~~~~~  330 (355)
                      +.+...++.|.++++...++++|+++..+ .++++++..|+......+|.|
T Consensus       243 ~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~-~iG~~lI~~gv~~~~~~~~~~  292 (295)
T PRK11689        243 LLATASYFTPVLSAALAALLLSTPLSFSF-WQGVAMVTAGSLLCWLATRRK  292 (295)
T ss_pred             HHHHHHHhHHHHHHHHHHHHhCCCCcHHH-HHHHHHHHHhHHHHhhhHhHh
Confidence            99999999999999999999999999999 999999999998777655543

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.61  E-value=1.2e-13  Score=132.25  Aligned_cols=255  Identities=12%  Similarity=0.090  Sum_probs=174.9

Q ss_pred             cCCchhhHHHHHHHHHHHHHHHHhcCCC-CCC-CC-cccchhhHHHHHHHHHHHHHHHHhcccccchhhHHH-hhhhhhH
Q 018509           45 QTGVSVILFIFCCLVPSSILFLLLQKPW-KGR-PL-LNTQMVPSVINGGITALYFILWGKGLKSCGPVRALL-AEYSGAV  120 (355)
Q Consensus        45 ~~p~~lv~f~Fl~~l~ss~~~l~~qkP~-~g~-~l-~~~Qw~~il~~gvv~~l~~lLwf~gL~~cGplrsiL-~e~s~~V  120 (355)
                      .+|..++.+|+.++.+..+.+...++++ ..+ .. +++++...+.-++..+++..+++.|+++.++-++.+ .-.+|..
T Consensus        33 ~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~  112 (296)
T PRK15430         33 VPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLV  112 (296)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Confidence            3778899999999888777776666544 111 11 222332233333444489999999999999999988 8889999


Q ss_pred             HHHHHHHHhCCCCCcchhhHHHHHHHHHHHHhhcccccccccCCccCCcchHhhhhhhhhccchhHHHHHHHHHHHHHHH
Q 018509          121 LGVLSAVLYGRRGHVWKKVGGLIAILASFYFLSQGWATETSSPFSFKDSLDAELRTEQVLGMKEMVVPLLAGILSALRRV  200 (355)
Q Consensus       121 l~~Ls~lf~g~~~~~~k~rG~~l~~igvl~lLs~gw~~~~~~pf~lfd~d~~~~~~~~~lG~~Dv~Lli~a~~l~a~~~~  200 (355)
                      ..+++.++.+|+.+.+|..|.++.++|+++++.         |    ++            -.+ ++.+++.++++.|.+
T Consensus       113 v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~---------~----~~------------~~~-~~~l~aa~~~a~~~i  166 (296)
T PRK15430        113 NIVLGMIFLGERFRRMQWLAVILAICGVLVQLW---------T----FG------------SLP-IIALGLAFSFAFYGL  166 (296)
T ss_pred             HHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH---------H----cC------------Ccc-HHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999861         1    11            112 367788999999999


Q ss_pred             Hhhhhhhhcc-cchhHHHHHHHHHHHHHhHHHHHHhhhccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhhhccc
Q 018509          201 IARRVSLKIT-LKRRLHAITITSATCFLFPVAMWDLIIGSKSSSSVDLPFSAWAFLSTTLFGIILIFYVDAMAEERLHMV  279 (355)
Q Consensus       201 ~sRr~s~~~g-g~kRL~Alt~l~stv~L~P~al~~~~~~~~s~~s~~~~~~~w~~l~~~vF~~VL~fyvesi~~~rl~~~  279 (355)
                      ..||...+.. +.-....+...+++..+++..  +   ....... ......|..++.......+.|+..+.+.+|+++.
T Consensus       167 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~-~~~~~~~~~~~~~g~~t~i~~~~~~~a~~~~~a~  240 (296)
T PRK15430        167 VRKKIAVEAQTGMLIETMWLLPVAAIYLFAIA--D---SSTSHMG-QNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLS  240 (296)
T ss_pred             HHHhcCCCCchhHHHHHHHHHHHHHHHHHHHc--c---CCccccc-CCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH
Confidence            9988753221 111112223333333322211  0   0000001 0012234443333335678999999999999999


Q ss_pred             ccCcchhhhhHHHHHHHHHHhccccchHHHHHHHHHH--hhhhhcccccCCCCCC
Q 018509          280 FSSPRHLMVAGGCIIVMEMVYKMDFSLIGFIICSLIL--GFGIYEATSLDHGRKD  332 (355)
Q Consensus       280 ~ss~r~~lV~~~c~iv~e~~~~~~~sl~g~lic~~ll--~~gv~~~t~~~~~~~~  332 (355)
                      +.|...++.|.++++...++++|.+++.+ ++++.++  ..++...+.....|||
T Consensus       241 ~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~-~~G~~lI~~~~~v~~~~~~~~~~~~  294 (296)
T PRK15430        241 TLGFFQYIGPTLMFLLAVTFYGEKPGADK-MVTFAFIWVALAIFVMDAIYTQRRK  294 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCCHHH-HHHHHHHHHHHHHHHHHHHHHhhhc
Confidence            99999999999999999999999999999 8888777  5556666655555554

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.57  E-value=1.2e-12  Score=129.15  Aligned_cols=254  Identities=8%  Similarity=0.036  Sum_probs=187.7

Q ss_pred             C-CchhhHHHHHHHHHHHHHHHHhc-CCCCCCCC--cccchhhHHHHHHHHHHHHHHHHhcccccchhhHHH-hhhhhhH
Q 018509           46 T-GVSVILFIFCCLVPSSILFLLLQ-KPWKGRPL--LNTQMVPSVINGGITALYFILWGKGLKSCGPVRALL-AEYSGAV  120 (355)
Q Consensus        46 ~-p~~lv~f~Fl~~l~ss~~~l~~q-kP~~g~~l--~~~Qw~~il~~gvv~~l~~lLwf~gL~~cGplrsiL-~e~s~~V  120 (355)
                      + |..++.++|+++.....++..+. +|  .+++  .++.|++++..|++++..+..-+.|+++..+-.+.+ -..+|+.
T Consensus        76 ~~P~~l~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~llp~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvf  153 (350)
T PTZ00343         76 PLPWTISSLQLFVGWLFALLYWATGFRK--IPRIKSLKLFLKNFLPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVF  153 (350)
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHHhCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHH
Confidence            5 89999999999876555544332 22  1223  355788999999999866666779999999988777 8899999


Q ss_pred             HHHHHHHHhCCCCCcchhhHHHHHHHHHHHHhhcccccccccCCccCCcchHhhhhhhhhccchhHHHHHHHHHHHHHHH
Q 018509          121 LGVLSAVLYGRRGHVWKKVGGLIAILASFYFLSQGWATETSSPFSFKDSLDAELRTEQVLGMKEMVVPLLAGILSALRRV  200 (355)
Q Consensus       121 l~~Ls~lf~g~~~~~~k~rG~~l~~igvl~lLs~gw~~~~~~pf~lfd~d~~~~~~~~~lG~~Dv~Lli~a~~l~a~~~~  200 (355)
                      +.+++.++++|+.+.++..+.+..+.|+.+...      ....++             .  .+++ ..++|.++++.|.+
T Consensus       154 t~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~------~~~~~~-------------~--~G~~-~~l~s~~~~a~~~i  211 (350)
T PTZ00343        154 TALLSILFLKQFLNLYAYLSLIPIVGGVALASV------KELHFT-------------W--LAFW-CAMLSNLGSSLRSI  211 (350)
T ss_pred             HHHHHHHHhCCCccHHHHHHHHHHHHHHHheec------ccchhH-------------H--HHHH-HHHHHHHHHHHHHH
Confidence            999999999999998998888888888888640      111111             1  2444 88889999999999


Q ss_pred             Hhhhhhhhcc------cchhHHHHHHHHHHHHHhHHHH-HHhhh--ccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHH
Q 018509          201 IARRVSLKIT------LKRRLHAITITSATCFLFPVAM-WDLII--GSKSSSSVDLPFSAWAFLSTTLFGIILIFYVDAM  271 (355)
Q Consensus       201 ~sRr~s~~~g------g~kRL~Alt~l~stv~L~P~al-~~~~~--~~~s~~s~~~~~~~w~~l~~~vF~~VL~fyvesi  271 (355)
                      ..||.+.+.+      .+.-+..+..++++++++|++. .|...  ..............|..+...++...+.||.+|.
T Consensus       212 ~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~l~~~l~n~  291 (350)
T PTZ00343        212 FAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFFSGVWYYLYNE  291 (350)
T ss_pred             HHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHH
Confidence            9999986542      2333566668899999999987 43210  0000000000011122322245667889999995


Q ss_pred             ----HhhhhcccccCcchhhhhHHHHHHHHHHhccccchHHHHHHHHHHhhhhhccc
Q 018509          272 ----AEERLHMVFSSPRHLMVAGGCIIVMEMVYKMDFSLIGFIICSLILGFGIYEAT  324 (355)
Q Consensus       272 ----~~~rl~~~~ss~r~~lV~~~c~iv~e~~~~~~~sl~g~lic~~ll~~gv~~~t  324 (355)
                          +.+|+++...+...++-|.+.+++..++++|++|+.+ ++|+++.+.|++.-+
T Consensus       292 ~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~-~iG~~lii~Gv~lYs  347 (350)
T PTZ00343        292 VAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLG-YLGMAVAILGALLYS  347 (350)
T ss_pred             HHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHh-HHHHHHHHHHHHHHh
Confidence                9999999999999999999999999999999999999 999999999997544

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.55  E-value=1.6e-12  Score=123.17  Aligned_cols=221  Identities=12%  Similarity=0.006  Sum_probs=159.2

Q ss_pred             CcccchhhHHHHHHHHHHHHHHHHhcccccchhhHHH-hhhhhhHHHHHHHHHhCCCCCcchhhHHHHHHHHHHHHhhcc
Q 018509           77 LLNTQMVPSVINGGITALYFILWGKGLKSCGPVRALL-AEYSGAVLGVLSAVLYGRRGHVWKKVGGLIAILASFYFLSQG  155 (355)
Q Consensus        77 l~~~Qw~~il~~gvv~~l~~lLwf~gL~~cGplrsiL-~e~s~~Vl~~Ls~lf~g~~~~~~k~rG~~l~~igvl~lLs~g  155 (355)
                      .+++.|...+.-++.+..++.+.++|+++.+.-++.. ...+|....+++.+++||+.++++..|..+.+.|++.+.   
T Consensus        58 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~---  134 (281)
T TIGR03340        58 LPATFWLLLAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLG---  134 (281)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHh---
Confidence            3444444445544556699999999999998888777 777788999999999999999999999999999999875   


Q ss_pred             cccccccCCccCCcchHhhhhhhhhccchhHHHHHHHHHHHHHHHHhhhhhhhcccchhHHHHHHHHHHHHH-hHHHHHH
Q 018509          156 WATETSSPFSFKDSLDAELRTEQVLGMKEMVVPLLAGILSALRRVIARRVSLKITLKRRLHAITITSATCFL-FPVAMWD  234 (355)
Q Consensus       156 w~~~~~~pf~lfd~d~~~~~~~~~lG~~Dv~Lli~a~~l~a~~~~~sRr~s~~~gg~kRL~Alt~l~stv~L-~P~al~~  234 (355)
                                ..|.++     .+.  .++. +.+++.++++.|.+..||...+. ++..........+.++. .|+..+.
T Consensus       135 ----------~~~~~~-----~~~--~g~~-~~l~aal~~a~~~i~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  195 (281)
T TIGR03340       135 ----------LSRFAQ-----HRR--KAYA-WALAAALGTAIYSLSDKAAALGV-PAFYSALGYLGIGFLAMGWPFLLLY  195 (281)
T ss_pred             ----------cccccc-----cch--hHHH-HHHHHHHHHHHhhhhccccccch-hcccccHHHHHHHHHHHHHHHHHHH
Confidence                      111100     011  2333 67888899999999999875433 22111111122333333 4555543


Q ss_pred             hhhccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcchhhhhHHHHHHHHHHhccccchHHHHHHHH
Q 018509          235 LIIGSKSSSSVDLPFSAWAFLSTTLFGIILIFYVDAMAEERLHMVFSSPRHLMVAGGCIIVMEMVYKMDFSLIGFIICSL  314 (355)
Q Consensus       235 ~~~~~~s~~s~~~~~~~w~~l~~~vF~~VL~fyvesi~~~rl~~~~ss~r~~lV~~~c~iv~e~~~~~~~sl~g~lic~~  314 (355)
                      ....+.....  .....|..++.+.+..++.|+..+.+.++.++.+.+...++.|.+.++...++++|+++..+ .+|+.
T Consensus       196 ~~~~~~~~~~--~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~-~iG~~  272 (281)
T TIGR03340       196 LKRHGRSMFP--YARQILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTR-LMGVC  272 (281)
T ss_pred             HHHhccchhh--hHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHH-HHHHH
Confidence            3222111111  11233444888889999999999999999999999999999999999999999999999999 99999


Q ss_pred             HHhhhhhc
Q 018509          315 ILGFGIYE  322 (355)
Q Consensus       315 ll~~gv~~  322 (355)
                      ++..|+..
T Consensus       273 lil~Gv~l  280 (281)
T TIGR03340       273 IIVAGLVV  280 (281)
T ss_pred             HHHHhHHh
Confidence            99999864

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>TIGR00688 rarD rarD protein

Probab=99.43  E-value=5.2e-11  Score=111.01  Aligned_cols=220  Identities=13%  Similarity=0.137  Sum_probs=157.9

Q ss_pred             cCCchhhHHHHHHHHHHHHHHHHhcCCCC-----CCCCcccc-hhhHHHHHHHHHHHHHHHHhcccccchhhHHH-hhhh
Q 018509           45 QTGVSVILFIFCCLVPSSILFLLLQKPWK-----GRPLLNTQ-MVPSVINGGITALYFILWGKGLKSCGPVRALL-AEYS  117 (355)
Q Consensus        45 ~~p~~lv~f~Fl~~l~ss~~~l~~qkP~~-----g~~l~~~Q-w~~il~~gvv~~l~~lLwf~gL~~cGplrsiL-~e~s  117 (355)
                      .+|..++++|++++.+..+++...+++++     -++.++++ +..+..-|+..++...+++.|+++.++.++.. .-.+
T Consensus        27 ~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~  106 (256)
T TIGR00688        27 LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLIGFNWWLFIWAVNNGSSLEVSLGYLIN  106 (256)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHH
Confidence            47799999999998877666665554321     11233444 34456667777799999999999999998888 8889


Q ss_pred             hhHHHHHHHHHhCCCCCcchhhHHHHHHHHHHHHhhcccccccccCCccCCcchHhhhhhhhhccchhHHHHHHHHHHHH
Q 018509          118 GAVLGVLSAVLYGRRGHVWKKVGGLIAILASFYFLSQGWATETSSPFSFKDSLDAELRTEQVLGMKEMVVPLLAGILSAL  197 (355)
Q Consensus       118 ~~Vl~~Ls~lf~g~~~~~~k~rG~~l~~igvl~lLs~gw~~~~~~pf~lfd~d~~~~~~~~~lG~~Dv~Lli~a~~l~a~  197 (355)
                      |....+++.+++|||.+.+|..|.++.+.|+.++.-         |    +.|.             ..+.+++.++++.
T Consensus       107 Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~---------~----~~~~-------------~~~~l~aa~~~a~  160 (256)
T TIGR00688       107 PLVMVALGRVFLKERISRFQFIAVIIATLGVISNIV---------L----KGSL-------------PWEALVLAFSFTA  160 (256)
T ss_pred             HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH---------H----cCCc-------------hHHHHHHHHHHHH
Confidence            999999999999999999999999999999988751         1    0100             1256789999999


Q ss_pred             HHHHhhhhhhhcccchhHHHHHHHHHHHHHhHHHHHHhhhccCCCCCCcchhHHHHH-HHHHHHHHHHHHHHHHHHhhhh
Q 018509          198 RRVIARRVSLKITLKRRLHAITITSATCFLFPVAMWDLIIGSKSSSSVDLPFSAWAF-LSTTLFGIILIFYVDAMAEERL  276 (355)
Q Consensus       198 ~~~~sRr~s~~~gg~kRL~Alt~l~stv~L~P~al~~~~~~~~s~~s~~~~~~~w~~-l~~~vF~~VL~fyvesi~~~rl  276 (355)
                      |.+..||...+.       ......++..+.|.+.......+........+...|.. +...++ .++.|+..+.+.+++
T Consensus       161 ~~i~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~-t~i~~~l~~~a~~~~  232 (256)
T TIGR00688       161 YGLIRKALKNTD-------LAGFCLETLSLMPVAIYYLLQTDFATVQQTNPFPIWLLLVLAGLI-TGTPLLAFVIAANRL  232 (256)
T ss_pred             HHHHHhhcCCCC-------cchHHHHHHHHHHHHHHHHHHhccCcccccCchhHHHHHHHHHHH-HHHHHHHHHHHHHcC
Confidence            999999975321       22344455566666654432221111010012234666 666655 788999999999999


Q ss_pred             cccccCcchhhhhHHHHHHHHH
Q 018509          277 HMVFSSPRHLMVAGGCIIVMEM  298 (355)
Q Consensus       277 ~~~~ss~r~~lV~~~c~iv~e~  298 (355)
                      ++++.++..++.|.++++...+
T Consensus       233 ~a~~~s~~~yl~Pv~~~~~~~~  254 (256)
T TIGR00688       233 PLNLLGLLQYIGPTIMMLCVSF  254 (256)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999887654

This uncharacterized protein is predicted to have many membrane-spanning domains.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.38  E-value=5.4e-10  Score=102.56  Aligned_cols=244  Identities=17%  Similarity=0.131  Sum_probs=170.7

Q ss_pred             hhHHHHHHHHHHHHHHHHhcCCCCCCCCcccchhhHHHHHHHHH-HHHHHHHhcccccchhhHHH-hhhhhhHHHHHHH-
Q 018509           50 VILFIFCCLVPSSILFLLLQKPWKGRPLLNTQMVPSVINGGITA-LYFILWGKGLKSCGPVRALL-AEYSGAVLGVLSA-  126 (355)
Q Consensus        50 lv~f~Fl~~l~ss~~~l~~qkP~~g~~l~~~Qw~~il~~gvv~~-l~~lLwf~gL~~cGplrsiL-~e~s~~Vl~~Ls~-  126 (355)
                      ...+++.+....  .....+++...+...++.+.....-++++. .+..+|+.++++.++-.+.+ ...+|....+++. 
T Consensus        39 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~  116 (292)
T COG0697          39 AAALRFLIAALL--LLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVL  116 (292)
T ss_pred             HHHHHHHHHHHH--HHHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHH
Confidence            333466666666  222233222122223333444444455544 89999999999999998888 9999998888886 


Q ss_pred             HHhCCCCCcchhhHHHHHHHHHHHHhhcccccccccCCccCCcchHhhhhhhhhccchhHHHHHHHHHHHHHHHHhhhhh
Q 018509          127 VLYGRRGHVWKKVGGLIAILASFYFLSQGWATETSSPFSFKDSLDAELRTEQVLGMKEMVVPLLAGILSALRRVIARRVS  206 (355)
Q Consensus       127 lf~g~~~~~~k~rG~~l~~igvl~lLs~gw~~~~~~pf~lfd~d~~~~~~~~~lG~~Dv~Lli~a~~l~a~~~~~sRr~s  206 (355)
                      ++++|+.+..+..|.++.++|++.+.             ..++.+...     ...++. +.+++.++++.+.+..|++.
T Consensus       117 ~~~~e~~~~~~~~~~~~~~~Gv~lv~-------------~~~~~~~~~-----~~~g~~-~~l~a~~~~a~~~~~~~~~~  177 (292)
T COG0697         117 LLLGERLSLLQILGILLALAGVLLIL-------------LGGGGGGIL-----SLLGLL-LALAAALLWALYTALVKRLS  177 (292)
T ss_pred             HHccCCCcHHHHHHHHHHHHhHHhee-------------cCCCcchhH-----HHHHHH-HHHHHHHHHHHHHHHHHHhc
Confidence            66799999999999888899999886             222211100     113444 88999999999999999987


Q ss_pred             hhcccchhHHH-HHHHHHHHHHhHHHHHHhhhccCCCCCCcchhHHHHH-HHHHHHHHHHHHHHHHHHhhhhcccccCcc
Q 018509          207 LKITLKRRLHA-ITITSATCFLFPVAMWDLIIGSKSSSSVDLPFSAWAF-LSTTLFGIILIFYVDAMAEERLHMVFSSPR  284 (355)
Q Consensus       207 ~~~gg~kRL~A-lt~l~stv~L~P~al~~~~~~~~s~~s~~~~~~~w~~-l~~~vF~~VL~fyvesi~~~rl~~~~ss~r  284 (355)
                       +. ++-.... +.......+..|+...+..    ...+    ...|.. ....+++..+.|+.+..+.++.+....++.
T Consensus       178 -~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~----~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~  247 (292)
T COG0697         178 -RL-GPVTLALLLQLLLALLLLLLFFLSGFG----APIL----SRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALL  247 (292)
T ss_pred             -CC-ChHHHHHHHHHHHHHHHHHHHHhcccc----ccCC----HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHH
Confidence             33 3333333 2333223333333332211    1122    344555 888888888999999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHhccccchHHHHHHHHHHhhhhhcccc
Q 018509          285 HLMVAGGCIIVMEMVYKMDFSLIGFIICSLILGFGIYEATS  325 (355)
Q Consensus       285 ~~lV~~~c~iv~e~~~~~~~sl~g~lic~~ll~~gv~~~t~  325 (355)
                      ....|+.+++...++++|.++..+ .+++.++..|+.....
T Consensus       248 ~~~~~v~~~~~~~l~~~e~~~~~~-~~G~~li~~g~~l~~~  287 (292)
T COG0697         248 SLLEPVFAALLGVLLLGEPLSPAQ-LLGAALVVLGVLLASL  287 (292)
T ss_pred             HHHHHHHHHHHHHHHhCCCCcHHH-HHHHHHHHHHHHHHhc
Confidence            999999999999999999999999 8999999999987664

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.03  E-value=4.8e-08  Score=94.10  Aligned_cols=262  Identities=15%  Similarity=0.103  Sum_probs=180.3

Q ss_pred             CchhhHHHHHHHHHHHHHHHHhcCCCCCCCCcccchhhHHHHHHHHHHHHHHHHhcccccchhhHHHhhhh-hhHHHHHH
Q 018509           47 GVSVILFIFCCLVPSSILFLLLQKPWKGRPLLNTQMVPSVINGGITALYFILWGKGLKSCGPVRALLAEYS-GAVLGVLS  125 (355)
Q Consensus        47 p~~lv~f~Fl~~l~ss~~~l~~qkP~~g~~l~~~Qw~~il~~gvv~~l~~lLwf~gL~~cGplrsiL~e~s-~~Vl~~Ls  125 (355)
                      |..+++.-+.+....+.......+   .++.++..+++.+..++..++...+-..+|+|.+..--+++..+ +.-..+++
T Consensus        32 ~~~lt~~q~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~  108 (303)
T PF08449_consen   32 PLFLTFVQFAFNALFSFILLSLFK---FPKSRKIPLKKYAILSFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILG  108 (303)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhcc---ccCCCcChHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHH
Confidence            345555555565555665555555   35567788889999999999999999999999887766664444 44555778


Q ss_pred             HHHhCCCCCcchhhHHHHHHHHHHHHhhcccccccccCCccCCcchHhhhhhh--hhccchhHHHHHHHHHHHHHHHHhh
Q 018509          126 AVLYGRRGHVWKKVGGLIAILASFYFLSQGWATETSSPFSFKDSLDAELRTEQ--VLGMKEMVVPLLAGILSALRRVIAR  203 (355)
Q Consensus       126 ~lf~g~~~~~~k~rG~~l~~igvl~lLs~gw~~~~~~pf~lfd~d~~~~~~~~--~lG~~Dv~Lli~a~~l~a~~~~~sR  203 (355)
                      .+++|++-+.+|..+.++..+|+...-             +.|.++..+..++  .-..|+ .+++++.++.+...+...
T Consensus       109 ~l~~~k~y~~~~~~~v~li~~Gv~~~~-------------~~~~~~~~~~~~~~~~~~~G~-~ll~~sl~~~a~~~~~qe  174 (303)
T PF08449_consen  109 VLILGKRYSRRQYLSVLLITIGVAIFT-------------LSDSSSSSSSNSSSFSSALGI-ILLLLSLLLDAFTGVYQE  174 (303)
T ss_pred             HHhcCccccHHHHHHHHHHHhhHheee-------------ecccccccccccccccchhHH-HHHHHHHHHHHHHHHHHH
Confidence            889999888888888888888888775             4443322222111  111144 489999999999999999


Q ss_pred             hhhhhcc-cchhHHHHHHHHHHHHHhHHHHHHhhhccCCCCC---CcchhHHHHH-HHHHHHHHHHHHHHHHHHhhhhcc
Q 018509          204 RVSLKIT-LKRRLHAITITSATCFLFPVAMWDLIIGSKSSSS---VDLPFSAWAF-LSTTLFGIILIFYVDAMAEERLHM  278 (355)
Q Consensus       204 r~s~~~g-g~kRL~Alt~l~stv~L~P~al~~~~~~~~s~~s---~~~~~~~w~~-l~~~vF~~VL~fyvesi~~~rl~~  278 (355)
                      |...+++ .+..+--++++.+.+++++....-. .++..+..   ..++. .|.. +..++.+.+..+++ ..+.++-++
T Consensus       175 ~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~-~~~~~~~~~f~~~~p~-~~~~l~~~s~~~~~g~~~i-~~~~~~~~a  251 (303)
T PF08449_consen  175 KLFKKYGKSPWELMFYTNLFSLPFLLILLFLLP-TGEFRSAIRFISAHPS-VLLYLLLFSLTGALGQFFI-FYLIKKFSA  251 (303)
T ss_pred             HHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHH-hhHhhHHHHHHHHhHH-HHHHHHHHHHHHHHHHHHH-HHHHHhcCc
Confidence            9998887 6667778899999998888777621 11111110   01122 2333 44444555545444 456777777


Q ss_pred             cccCcchhhhhHHHHHHHHHHhccccchHHHHHHHHHHhhhhhcccccCCC
Q 018509          279 VFSSPRHLMVAGGCIIVMEMVYKMDFSLIGFIICSLILGFGIYEATSLDHG  329 (355)
Q Consensus       279 ~~ss~r~~lV~~~c~iv~e~~~~~~~sl~g~lic~~ll~~gv~~~t~~~~~  329 (355)
                      ...+.-..+=-++++++...+++.++|..+ .+|.+++..|...-...+++
T Consensus       252 l~~t~v~t~Rk~~sillS~~~f~~~~~~~~-~~G~~lv~~g~~~~~~~~~k  301 (303)
T PF08449_consen  252 LTTTIVTTLRKFLSILLSVIIFGHPLSPLQ-WIGIVLVFAGIFLYSYAKKK  301 (303)
T ss_pred             hhhhhHHHHHHHHHHHHHHHhcCCcCChHH-HHHHHHhHHHHHHHHHhhcc
Confidence            666665555568888899999999999999 99999999998865543333

; GO: 0055085 transmembrane transport

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=98.88  E-value=4.3e-07  Score=87.35  Aligned_cols=253  Identities=17%  Similarity=0.171  Sum_probs=184.6

Q ss_pred             HHHHHHhHhhhhcc--CCchhhHHHHHHHHHHHHHHHHhcCCCCCCCCcccchhhHHHHHHHHHHHHHHHHhcccccchh
Q 018509           32 RIWSVYSMYRYLSQ--TGVSVILFIFCCLVPSSILFLLLQKPWKGRPLLNTQMVPSVINGGITALYFILWGKGLKSCGPV  109 (355)
Q Consensus        32 r~~~i~~~y~~l~~--~p~~lv~f~Fl~~l~ss~~~l~~qkP~~g~~l~~~Qw~~il~~gvv~~l~~lLwf~gL~~cGpl  109 (355)
                      ...++|.--.+-|+  |-+--..-.++=....+.+++.+-||| .+.++++||..++..|+..+.-|++|+.+++-. |+
T Consensus        20 amvsiq~Gas~Ak~LFP~vG~~g~t~lRl~~aaLIll~l~RPw-r~r~~~~~~~~~~~yGvsLg~MNl~FY~si~ri-Pl   97 (292)
T COG5006          20 AMVSIQSGASFAKSLFPLVGAAGVTALRLAIAALILLALFRPW-RRRLSKPQRLALLAYGVSLGGMNLLFYLSIERI-PL   97 (292)
T ss_pred             HHHHHHhhHHHHHHHccccChhhHHHHHHHHHHHHHHHHhhHH-HhccChhhhHHHHHHHHHHHHHHHHHHHHHHhc-cc
Confidence            45566666666655  112222334455566788999999999 899999999999999999999999999999987 88


Q ss_pred             hHHH-hhhhhh-HHHHHHHHHhCCCCCcchhhHHHHHHHHHHHHhhcccccccccCCccCCcchHhhhhhhhhccch---
Q 018509          110 RALL-AEYSGA-VLGVLSAVLYGRRGHVWKKVGGLIAILASFYFLSQGWATETSSPFSFKDSLDAELRTEQVLGMKE---  184 (355)
Q Consensus       110 rsiL-~e~s~~-Vl~~Ls~lf~g~~~~~~k~rG~~l~~igvl~lLs~gw~~~~~~pf~lfd~d~~~~~~~~~lG~~D---  184 (355)
                      .... -|..+- ..+.+    .+|  +.+...=..+++.|..+++          |..   +         -.+.-|   
T Consensus        98 GiAVAiEF~GPL~vA~~----~sR--r~~d~vwvaLAvlGi~lL~----------p~~---~---------~~~~lDp~G  149 (292)
T COG5006          98 GIAVAIEFTGPLAVALL----SSR--RLRDFVWVALAVLGIWLLL----------PLG---Q---------SVWSLDPVG  149 (292)
T ss_pred             hhhhhhhhccHHHHHHH----hcc--chhhHHHHHHHHHHHHhhe----------ecc---C---------CcCcCCHHH
Confidence            7777 888776 44443    232  2233344566777777776          322   1         112233   


Q ss_pred             hHHHHHHHHHHHHHHHHhhhhhhhcccchhHHHHHHHHHHHHHhHHHHHHhhhccCCCCCCcchh-HHHHH-HHHHHHHH
Q 018509          185 MVVPLLAGILSALRRVIARRVSLKITLKRRLHAITITSATCFLFPVAMWDLIIGSKSSSSVDLPF-SAWAF-LSTTLFGI  262 (355)
Q Consensus       185 v~Lli~a~~l~a~~~~~sRr~s~~~gg~kRL~Alt~l~stv~L~P~al~~~~~~~~s~~s~~~~~-~~w~~-l~~~vF~~  262 (355)
                      +..-+.++.||+.|=+.++|.... +...+-.|+.+++++++-+|+..-+.     ..+   ++. +.... +-+.+...
T Consensus       150 v~~Al~AG~~Wa~YIv~G~r~g~~-~~g~~g~a~gm~vAaviv~Pig~~~a-----g~~---l~~p~ll~laLgvavlSS  220 (292)
T COG5006         150 VALALGAGACWALYIVLGQRAGRA-EHGTAGVAVGMLVAALIVLPIGAAQA-----GPA---LFSPSLLPLALGVAVLSS  220 (292)
T ss_pred             HHHHHHHhHHHHHHHHHcchhccc-CCCchHHHHHHHHHHHHHhhhhhhhc-----chh---hcChHHHHHHHHHHHHhc
Confidence            447889999999999999999853 35678899999999999999998443     211   122 22333 88889999


Q ss_pred             HHHHHHHHHHhhhhcccccCcchhhhhHHHHHHHHHHhccccchHHHHHHHHHHhhhhhccc
Q 018509          263 ILIFYVDAMAEERLHMVFSSPRHLMVAGGCIIVMEMVYKMDFSLIGFIICSLILGFGIYEAT  324 (355)
Q Consensus       263 VL~fyvesi~~~rl~~~~ss~r~~lV~~~c~iv~e~~~~~~~sl~g~lic~~ll~~gv~~~t  324 (355)
                      ++-|-.|.++-.|+....=+.--.+-|.+.++.=-.+++|.+|+.| .++=..++.++--.|
T Consensus       221 alPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~q-wlaI~~ViaAsaG~~  281 (292)
T COG5006         221 ALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQ-WLAIAAVIAASAGST  281 (292)
T ss_pred             ccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHH-HHHHHHHHHHHhccc
Confidence            9999999999988876544444556788899988899999999999 777777777776444

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=98.67  E-value=6.8e-06  Score=81.83  Aligned_cols=253  Identities=15%  Similarity=0.084  Sum_probs=153.5

Q ss_pred             chhhHHHHHHHHHHHHHHHHhcCCC-CCCCCcccchhhHHHHHHHHHHHHHHHHhcccccchhhHHH-hhhhhhHHHHHH
Q 018509           48 VSVILFIFCCLVPSSILFLLLQKPW-KGRPLLNTQMVPSVINGGITALYFILWGKGLKSCGPVRALL-AEYSGAVLGVLS  125 (355)
Q Consensus        48 ~~lv~f~Fl~~l~ss~~~l~~qkP~-~g~~l~~~Qw~~il~~gvv~~l~~lLwf~gL~~cGplrsiL-~e~s~~Vl~~Ls  125 (355)
                      ..-..+-+......-......|+.. +-.+..++.|-+.+..|++-+.-+.++..|++|+.-.-.-| .-.+-....++|
T Consensus        44 ~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS  123 (334)
T PF06027_consen   44 TFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILS  123 (334)
T ss_pred             HHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHH
Confidence            3333344444333334445555444 22233345555555569999999999999999998774444 555555777889


Q ss_pred             HHHhCCCCCcchhhHHHHHHHHHHHHhhcccccccccCCccCCcchHh--hhhhhhhccchhHHHHHHHHHHHHHHHHhh
Q 018509          126 AVLYGRRGHVWKKVGGLIAILASFYFLSQGWATETSSPFSFKDSLDAE--LRTEQVLGMKEMVVPLLAGILSALRRVIAR  203 (355)
Q Consensus       126 ~lf~g~~~~~~k~rG~~l~~igvl~lLs~gw~~~~~~pf~lfd~d~~~--~~~~~~lG~~Dv~Lli~a~~l~a~~~~~sR  203 (355)
                      .+++++|-+..|..|+++.+.|+.++.             .=|.+...  ....|-+ .+|+ +.+++-++.+.+.+.-+
T Consensus       124 ~~fL~~ry~~~~~~gv~i~i~Gv~lv~-------------~sD~~~~~~~~~~~~~i-~GDl-l~l~~a~lya~~nV~~E  188 (334)
T PF06027_consen  124 FIFLKRRYSWFHILGVLICIAGVVLVV-------------VSDVLSGSDSSSGSNPI-LGDL-LALLGAILYAVSNVLEE  188 (334)
T ss_pred             HHHHHhhhhHHHHHHHHHHHhhhhhee-------------eecccccccCCCCCccc-hhHH-HHHHHHHHHHHHHHHHH
Confidence            999999999999999999999988886             33421111  1112333 7887 77999999999999988


Q ss_pred             hhhhhcccchhHHHHHHHHHHHHHhHHHHHHhhhccCCCCCCcchhH-HHHHHHHHHHHHHHHHHHHHHHhhhhcccccC
Q 018509          204 RVSLKITLKRRLHAITITSATCFLFPVAMWDLIIGSKSSSSVDLPFS-AWAFLSTTLFGIILIFYVDAMAEERLHMVFSS  282 (355)
Q Consensus       204 r~s~~~gg~kRL~Alt~l~stv~L~P~al~~~~~~~~s~~s~~~~~~-~w~~l~~~vF~~VL~fyvesi~~~rl~~~~ss  282 (355)
                      +..++. ...-.-+.--++++++..|....    .+-++-....|.. .+.++..-...+.+.|+...+..+.-++..-.
T Consensus       189 ~~v~~~-~~~~~lg~~Glfg~ii~~iq~~i----le~~~i~~~~w~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~n  263 (334)
T PF06027_consen  189 KLVKKA-PRVEFLGMLGLFGFIISGIQLAI----LERSGIESIHWTSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFFN  263 (334)
T ss_pred             HhcccC-CHHHHHHHHHHHHHHHHHHHHHh----eehhhhhccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhCccceee
Confidence            887665 44445555566777776654432    2222211111221 12221111223445555555554443333222


Q ss_pred             cchhhhhHHHHHHHHHHhccccchHHHHHHHHHHhhhhh
Q 018509          283 PRHLMVAGGCIIVMEMVYKMDFSLIGFIICSLILGFGIY  321 (355)
Q Consensus       283 ~r~~lV~~~c~iv~e~~~~~~~sl~g~lic~~ll~~gv~  321 (355)
                      .-...-.+.+.++--++++++++..- .++-+++++|+.
T Consensus       264 LsLLTsd~~ali~~i~~f~~~~~~ly-~~af~lIiiG~v  301 (334)
T PF06027_consen  264 LSLLTSDFYALIIDIFFFGYKFSWLY-ILAFALIIIGFV  301 (334)
T ss_pred             hHHHHhhHHHHHHHHHhcCccccHHH-HHHHHHHHHHhh
Confidence            21222236666777778999999987 788777777765

Some of the sequences in this family are annotated as putative membrane proteins.

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=98.37  E-value=2e-06  Score=69.54  Aligned_cols=106  Identities=17%  Similarity=0.172  Sum_probs=92.2

Q ss_pred             CCchhhHHHHHHHHHHHHHHHHhcCCCCCCCCcccchhhHHHHHHHH-HHHHHHHHhcccccchhhHHH-hhhhhhHHHH
Q 018509           46 TGVSVILFIFCCLVPSSILFLLLQKPWKGRPLLNTQMVPSVINGGIT-ALYFILWGKGLKSCGPVRALL-AEYSGAVLGV  123 (355)
Q Consensus        46 ~p~~lv~f~Fl~~l~ss~~~l~~qkP~~g~~l~~~Qw~~il~~gvv~-~l~~lLwf~gL~~cGplrsiL-~e~s~~Vl~~  123 (355)
                      +|...+.+++.+..+ .+++..++++...+..++++|...+..|+++ ++...+|+.|+++.+|-++.. ...+|....+
T Consensus        18 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i   96 (126)
T PF00892_consen   18 SPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISASIVSILQYLSPVFAAI   96 (126)
T ss_pred             CHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcchhHHHHHHHHHHHHHHH
Confidence            667888888888887 6777777776634788889999999999995 699999999999999998888 7788888888


Q ss_pred             HHHHHhCCCCCcchhhHHHHHHHHHHHHh
Q 018509          124 LSAVLYGRRGHVWKKVGGLIAILASFYFL  152 (355)
Q Consensus       124 Ls~lf~g~~~~~~k~rG~~l~~igvl~lL  152 (355)
                      ++.++++|+.+++|..|.++.+.|++++.
T Consensus        97 ~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   97 LGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999998875

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.30  E-value=0.00013  Score=70.54  Aligned_cols=215  Identities=9%  Similarity=0.055  Sum_probs=147.5

Q ss_pred             cchhhHHHHHHHHHHHHHHHHhcccccchhhHHH-hh-hhhhHHHHHHHHHhCCCCCcch----hhHHHHHHHHHHHHhh
Q 018509           80 TQMVPSVINGGITALYFILWGKGLKSCGPVRALL-AE-YSGAVLGVLSAVLYGRRGHVWK----KVGGLIAILASFYFLS  153 (355)
Q Consensus        80 ~Qw~~il~~gvv~~l~~lLwf~gL~~cGplrsiL-~e-~s~~Vl~~Ls~lf~g~~~~~~k----~rG~~l~~igvl~lLs  153 (355)
                      +.|..-+.-|+.=+.-+++++.+.++.|--.+.+ .. .++++..+.+.++++|+.++++    ..|.++.++|++++- 
T Consensus        57 ~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~-  135 (290)
T TIGR00776        57 SIFLVGLLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTS-  135 (290)
T ss_pred             HHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEE-
Confidence            3333333334444466799999999999998877 55 6666677789999999988888    888888888877663 


Q ss_pred             cccccccccCCccCCcchHhhhhhhhhccchhHHHHHHHHHHHHHHHHhhhhhhhcccchhH---HHHHHHHHHHHHhHH
Q 018509          154 QGWATETSSPFSFKDSLDAELRTEQVLGMKEMVVPLLAGILSALRRVIARRVSLKITLKRRL---HAITITSATCFLFPV  230 (355)
Q Consensus       154 ~gw~~~~~~pf~lfd~d~~~~~~~~~lG~~Dv~Lli~a~~l~a~~~~~sRr~s~~~gg~kRL---~Alt~l~stv~L~P~  230 (355)
                                  .-+.++..++.+... ..-+..-++++++.+.|-...|+..  + ++.-.   +++...++..+++++
T Consensus       136 ------------~~~~~~~~~~~~~~~-~~Gi~~~l~sg~~y~~~~~~~~~~~--~-~~~~~~~~~~~g~~~~~~~~~~~  199 (290)
T TIGR00776       136 ------------RSKDKSAGIKSEFNF-KKGILLLLMSTIGYLVYVVVAKAFG--V-DGLSVLLPQAIGMVIGGIIFNLG  199 (290)
T ss_pred             ------------eccccccccccccch-hhHHHHHHHHHHHHHHHHHHHHHcC--C-CcceehhHHHHHHHHHHHHHHHH
Confidence                        111111111110111 2236688889999999999999873  3 56666   777777666655554


Q ss_pred             HHHHhhhccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhh-hhcccccCcchhhhhHHHHHHHHHHhccccchHHH
Q 018509          231 AMWDLIIGSKSSSSVDLPFSAWAFLSTTLFGIILIFYVDAMAEE-RLHMVFSSPRHLMVAGGCIIVMEMVYKMDFSLIGF  309 (355)
Q Consensus       231 al~~~~~~~~s~~s~~~~~~~w~~l~~~vF~~VL~fyvesi~~~-rl~~~~ss~r~~lV~~~c~iv~e~~~~~~~sl~g~  309 (355)
                      ..      ..++.   .....|..+...++ ..+.|.....+.+ +++..+++.--..-|..+++...++++|..+..+ 
T Consensus       200 ~~------~~~~~---~~~~~~~~~~~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~-  268 (290)
T TIGR00776       200 HI------LAKPL---KKYAILLNILPGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKRE-  268 (290)
T ss_pred             Hh------cccch---HHHHHHHHHHHHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcce-
Confidence            31      00111   12344544335555 4666666666667 8999999999999999999999999999999999 


Q ss_pred             H----HHHHHHhhhhhc
Q 018509          310 I----ICSLILGFGIYE  322 (355)
Q Consensus       310 l----ic~~ll~~gv~~  322 (355)
                      +    ++..+++.|+..
T Consensus       269 ~~~~~iG~~lIi~~~~l  285 (290)
T TIGR00776       269 MIAISVGIILIIIAANI  285 (290)
T ss_pred             eehhHHHHHHHHHHHHH
Confidence            6    788887777754

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.08  E-value=0.00087  Score=65.75  Aligned_cols=251  Identities=16%  Similarity=0.184  Sum_probs=169.6

Q ss_pred             HHHHHhHhh-hhcc-CCchhhHHHHHHHHHHHHHHHHhcCCC-CCCCCcccchhhHHHHHHHHHHHHHHHH---hccccc
Q 018509           33 IWSVYSMYR-YLSQ-TGVSVILFIFCCLVPSSILFLLLQKPW-KGRPLLNTQMVPSVINGGITALYFILWG---KGLKSC  106 (355)
Q Consensus        33 ~~~i~~~y~-~l~~-~p~~lv~f~Fl~~l~ss~~~l~~qkP~-~g~~l~~~Qw~~il~~gvv~~l~~lLwf---~gL~~c  106 (355)
                      .||..-.|- +++. ++.-+...|-+-..+..+..+..-|.| ..+. ..+|.+.++...+.+.++..=|.   .+...=
T Consensus        18 lwG~lp~y~kll~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~-~~~~p~~~~~~~l~a~li~~nW~lfiWAvn~g   96 (293)
T COG2962          18 LWGLLPLYFKLLEPLPATEILAHRVIWSFPFMLALLFLLRQWRELKQ-LLKQPKTLLMLALTALLIGLNWWLFIWAVNNG   96 (293)
T ss_pred             HHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH-HHhCcHHHHHHHHHHHHHHHHHHHhheecCCC
Confidence            455544443 3433 556666677777777777777766776 2333 34566666666666665554444   777777


Q ss_pred             chhhHHH-hhhhhhHHHHHHHHHhCCCCCcchhhHHHHHHHHHHHHhhcccccccccCCccCCcchHhhhhhhhhccchh
Q 018509          107 GPVRALL-AEYSGAVLGVLSAVLYGRRGHVWKKVGGLIAILASFYFLSQGWATETSSPFSFKDSLDAELRTEQVLGMKEM  185 (355)
Q Consensus       107 GplrsiL-~e~s~~Vl~~Ls~lf~g~~~~~~k~rG~~l~~igvl~lLs~gw~~~~~~pf~lfd~d~~~~~~~~~lG~~Dv  185 (355)
                      -.+.++| -=.||.+..++..+|+||+.++-|.+...++.+||....   |+         +++                
T Consensus        97 ~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~---~~---------~g~----------------  148 (293)
T COG2962          97 HVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQT---WL---------LGS----------------  148 (293)
T ss_pred             chhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH---HH---------cCC----------------
Confidence            7788999 888999999999999999999999999999999999886   10         111                


Q ss_pred             HHHHHHHH--HH-HHHHHHhhhhh-hhcccchhHHHHHHHHHHHHHhHHHHHHhhhccCCCC--CCcchhHHHHH-HHHH
Q 018509          186 VVPLLAGI--LS-ALRRVIARRVS-LKITLKRRLHAITITSATCFLFPVAMWDLIIGSKSSS--SVDLPFSAWAF-LSTT  258 (355)
Q Consensus       186 ~Lli~a~~--l~-a~~~~~sRr~s-~~~gg~kRL~Alt~l~stv~L~P~al~~~~~~~~s~~--s~~~~~~~w~~-l~~~  258 (355)
                       +|..|..  ++ +.|. +.||.. .+.       .-+.++-|..+.|+|+.-....+.+..  ..+.+...++. +.-.
T Consensus       149 -lpwval~la~sf~~Yg-l~RK~~~v~a-------~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~aG~  219 (293)
T COG2962         149 -LPWVALALALSFGLYG-LLRKKLKVDA-------LTGLTLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLLVLAGL  219 (293)
T ss_pred             -CcHHHHHHHHHHHHHH-HHHHhcCCch-------HHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHhhH
Confidence             2333332  22 3343 445543 322       346788999999999988777666652  10112333333 5555


Q ss_pred             HHHHHHHHHHHHHHhhhhcccccCcchhhhhHHHHHHHHHHhccccchHHHHHHHHHHhhhhhccc
Q 018509          259 LFGIILIFYVDAMAEERLHMVFSSPRHLMVAGGCIIVMEMVYKMDFSLIGFIICSLILGFGIYEAT  324 (355)
Q Consensus       259 vF~~VL~fyvesi~~~rl~~~~ss~r~~lV~~~c~iv~e~~~~~~~sl~g~lic~~ll~~gv~~~t  324 (355)
                      +.+.-+.-|  ..+.+|+..+.-...-+.-|+.--++..++++|.|+..+ +++=..++.|+..-+
T Consensus       220 vTavpL~lf--~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~-~~~F~~IW~aL~l~~  282 (293)
T COG2962         220 VTAVPLLLF--AAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQ-LVTFAFIWLALALFS  282 (293)
T ss_pred             HHHHHHHHH--HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHH-HHHHHHHHHHHHHHH
Confidence            555555544  446777777777777788898888999999999999999 888888888876443

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.06  E-value=1.8e-05  Score=65.89  Aligned_cols=101  Identities=15%  Similarity=0.153  Sum_probs=85.4

Q ss_pred             HHHHHHHHHHHHHHHHhcCCC--CCCCCcccchhhHHHHHHHHH-HHHHHHHhcccccchhhHHHhhhhhhHHHHHHHHH
Q 018509           52 LFIFCCLVPSSILFLLLQKPW--KGRPLLNTQMVPSVINGGITA-LYFILWGKGLKSCGPVRALLAEYSGAVLGVLSAVL  128 (355)
Q Consensus        52 ~f~Fl~~l~ss~~~l~~qkP~--~g~~l~~~Qw~~il~~gvv~~-l~~lLwf~gL~~cGplrsiL~e~s~~Vl~~Ls~lf  128 (355)
                      .+|+.+..+....++..+|+.  --+.+++++|...+.-|+++. ....+|+.|+++.++.-+.+.+.+|++..+++.++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~v~~i~~~~pi~~~ll~~~~   81 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAPALVAAIFSLSPIFTALLSWLF   81 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH
Confidence            467888888888888887665  234566788888888889887 99999999999999644444999999999999999


Q ss_pred             hCCCCCcchhhHHHHHHHHHHHHh
Q 018509          129 YGRRGHVWKKVGGLIAILASFYFL  152 (355)
Q Consensus       129 ~g~~~~~~k~rG~~l~~igvl~lL  152 (355)
                      ++|+.++++..|.++.++|++.+.
T Consensus        82 ~~er~~~~~~~a~~l~~~Gv~li~  105 (113)
T PF13536_consen   82 FKERLSPRRWLAILLILIGVILIA  105 (113)
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999986

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=97.95  E-value=3.7e-05  Score=62.10  Aligned_cols=122  Identities=15%  Similarity=0.051  Sum_probs=98.3

Q ss_pred             HHHHHHHHHhhhhhhhcccchhHHHHHHHHHHHHHhHHHHHHhhhccCCCCCCcchhHHHHH-HHHHHHHHHHHHHHHHH
Q 018509          193 ILSALRRVIARRVSLKITLKRRLHAITITSATCFLFPVAMWDLIIGSKSSSSVDLPFSAWAF-LSTTLFGIILIFYVDAM  271 (355)
Q Consensus       193 ~l~a~~~~~sRr~s~~~gg~kRL~Alt~l~stv~L~P~al~~~~~~~~s~~s~~~~~~~w~~-l~~~vF~~VL~fyvesi  271 (355)
                      ++|+.+.+..|+...+. ++....++...++.+ +++...+..... ....    ....|.. +...+++..+.++..+.
T Consensus         1 ~~~a~~~~~~k~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~   73 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKI-SPLSITFWRFLIAGI-LLILLLILGRKP-FKNL----SPRQWLWLLFLGLLGTALAYLLYFY   73 (126)
T ss_pred             ceeeeHHHHHHHHhccC-CHHHHHHHHHHHHHH-HHHHHHhhcccc-ccCC----ChhhhhhhhHhhccceehHHHHHHH
Confidence            36778888889888886 788899999999987 666665544322 1111    1333444 77777778999999999


Q ss_pred             HhhhhcccccCcchhhhhHHHHHHHHHHhccccchHHHHHHHHHHhhhhhc
Q 018509          272 AEERLHMVFSSPRHLMVAGGCIIVMEMVYKMDFSLIGFIICSLILGFGIYE  322 (355)
Q Consensus       272 ~~~rl~~~~ss~r~~lV~~~c~iv~e~~~~~~~sl~g~lic~~ll~~gv~~  322 (355)
                      +.++.+..+.+...++.|.+.++....+++|+++..+ .+|..+...|+..
T Consensus        74 a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~-~~g~~l~~~g~~l  123 (126)
T PF00892_consen   74 ALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQ-IIGIILIIIGVVL  123 (126)
T ss_pred             HHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHH-HHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999 9999999998864

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=97.73  E-value=0.00081  Score=63.95  Aligned_cols=132  Identities=15%  Similarity=0.169  Sum_probs=101.0

Q ss_pred             hHHHHHHHHHHHHHHHHhhhhhhhcccchhHHHHHHHHHHHHHhHHHHHHhhhccCCCCCCcchhHHHHHHHHHHHHHHH
Q 018509          185 MVVPLLAGILSALRRVIARRVSLKITLKRRLHAITITSATCFLFPVAMWDLIIGSKSSSSVDLPFSAWAFLSTTLFGIIL  264 (355)
Q Consensus       185 v~Lli~a~~l~a~~~~~sRr~s~~~gg~kRL~Alt~l~stv~L~P~al~~~~~~~~s~~s~~~~~~~w~~l~~~vF~~VL  264 (355)
                      ..+++++.++++.++...||...+. ..  ...+....+++++.|++.+...-..-...    ....|........+...
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~-~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~   75 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKE-PD--FLWWALLAHSVLLTPYGLWYLAQVGWSRL----PATFWLLLAISAVANMV   75 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCch-hH--HHHHHHHHHHHHHHHHHHHhcccCCCCCc----chhhHHHHHHHHHHHHH
Confidence            3589999999999999999887653 11  34566677888999998874211111111    12334445556666778


Q ss_pred             HHHHHHHHhhhhcccccCcchhhhhHHHHHHHHHHhccccchHHHHHHHHHHhhhhhccc
Q 018509          265 IFYVDAMAEERLHMVFSSPRHLMVAGGCIIVMEMVYKMDFSLIGFIICSLILGFGIYEAT  324 (355)
Q Consensus       265 ~fyvesi~~~rl~~~~ss~r~~lV~~~c~iv~e~~~~~~~sl~g~lic~~ll~~gv~~~t  324 (355)
                      .++.-..+.++.+....++.....|.+.++..-.+++|+++..+ .+|..+...|+....
T Consensus        76 ~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~-~~g~~~~~~Gv~ll~  134 (281)
T TIGR03340        76 YFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLA-WLGILIITLGLLVLG  134 (281)
T ss_pred             HHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHH-HHHHHHHHHHHHHHh
Confidence            88888889999999999999999999999999999999999999 889999999988654

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.32  E-value=0.005  Score=53.60  Aligned_cols=117  Identities=13%  Similarity=0.050  Sum_probs=83.3

Q ss_pred             hHHHHHHHHHHHHHHHHhhhhhhhcccchhHHHHHHHHHHHHHhHHHHHHhhhccCCCCCCcchhHHHHHHHHHHHHHHH
Q 018509          185 MVVPLLAGILSALRRVIARRVSLKITLKRRLHAITITSATCFLFPVAMWDLIIGSKSSSSVDLPFSAWAFLSTTLFGIIL  264 (355)
Q Consensus       185 v~Lli~a~~l~a~~~~~sRr~s~~~gg~kRL~Alt~l~stv~L~P~al~~~~~~~~s~~s~~~~~~~w~~l~~~vF~~VL  264 (355)
                      ..+.+++.++.+.-+..-|+-+.+.|...--.      . .+.....+                ...+..++..++..++
T Consensus         4 ~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~------~-~~~~~~~~----------------~~p~~~i~lgl~~~~l   60 (129)
T PRK02971          4 YLWGLASVLLASVAQLSLKWGMSRLPLLSHAW------D-FIAALLAF----------------GLALRAVLLGLAGYAL   60 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCCCccchh------H-HHHHHHHH----------------hccHHHHHHHHHHHHH
Confidence            34677788888888888887776654211000      0 00000000                0012237778889999


Q ss_pred             HHHHHHHHhhhhcccccCcchhhhhHHHHHHHHH--HhccccchHHHHHHHHHHhhhhhcccc
Q 018509          265 IFYVDAMAEERLHMVFSSPRHLMVAGGCIIVMEM--VYKMDFSLIGFIICSLILGFGIYEATS  325 (355)
Q Consensus       265 ~fyvesi~~~rl~~~~ss~r~~lV~~~c~iv~e~--~~~~~~sl~g~lic~~ll~~gv~~~t~  325 (355)
                      .|+.++.+-+|++.+.+.+....++....+....  +++|++|+.+ .+|.++++.||...+.
T Consensus        61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~-~iGi~lIi~GV~lv~~  122 (129)
T PRK02971         61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKK-TLGVACIMLGVWLINL  122 (129)
T ss_pred             HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHH-HHHHHHHHHHHHHhcc
Confidence            9999999999999999999988887666555554  8999999999 9999999999998765

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=97.30  E-value=0.0051  Score=56.79  Aligned_cols=94  Identities=23%  Similarity=0.267  Sum_probs=75.4

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCcccchhhHHHHHHHHH-HHHHHHHhcccccchhhHHH-hhhhhhHHHHHHHHHhC
Q 018509           53 FIFCCLVPSSILFLLLQKPWKGRPLLNTQMVPSVINGGITA-LYFILWGKGLKSCGPVRALL-AEYSGAVLGVLSAVLYG  130 (355)
Q Consensus        53 f~Fl~~l~ss~~~l~~qkP~~g~~l~~~Qw~~il~~gvv~~-l~~lLwf~gL~~cGplrsiL-~e~s~~Vl~~Ls~lf~g  130 (355)
                      ..+.+..+...++....++.  .....++|..++..|+++. +-..+|++++++.||-++.. ....|.+..+++.++++
T Consensus       164 ~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~  241 (260)
T TIGR00950       164 WVLLLGALLLLPFAWFLGPN--PQALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILG  241 (260)
T ss_pred             HHHHHHHHHHHHHHHhcCCC--CCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhC
Confidence            34566655555555555444  2346678888888888875 78889999999999999999 88888888899999999


Q ss_pred             CCCCcchhhHHHHHHHHH
Q 018509          131 RRGHVWKKVGGLIAILAS  148 (355)
Q Consensus       131 ~~~~~~k~rG~~l~~igv  148 (355)
                      |+.++.+..|..+.+.|+
T Consensus       242 E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       242 ETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             CCCCHHHHHHHHHHHHhc
Confidence            999999999999988876

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=97.04  E-value=0.0065  Score=60.45  Aligned_cols=248  Identities=13%  Similarity=0.108  Sum_probs=154.3

Q ss_pred             CchhhHHHHHHHHHHHHHHHHhcCCCCCCCCcccchhhHHHHHHHHHHHHHHHHhcccccchhhHHH-hhhhhhHHHHHH
Q 018509           47 GVSVILFIFCCLVPSSILFLLLQKPWKGRPLLNTQMVPSVINGGITALYFILWGKGLKSCGPVRALL-AEYSGAVLGVLS  125 (355)
Q Consensus        47 p~~lv~f~Fl~~l~ss~~~l~~qkP~~g~~l~~~Qw~~il~~gvv~~l~~lLwf~gL~~cGplrsiL-~e~s~~Vl~~Ls  125 (355)
                      |..++.+.+.|...+..+.-.+.-+..-+..++.+|..++-.|++-++-+++-..++++-.--=.-. -+..|..+.+++
T Consensus        48 p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~  127 (316)
T KOG1441|consen   48 PITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLS  127 (316)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHH
Confidence            3556666555555555555444444423334679999999999999999999999999984332223 777888888899


Q ss_pred             HHHhCCCCCcchhhHHHHHHHHHHHHhhcc--cccccccCCccCCcchHhhhhhhhhccchhHHHHHHHHHHHHHHHHhh
Q 018509          126 AVLYGRRGHVWKKVGGLIAILASFYFLSQG--WATETSSPFSFKDSLDAELRTEQVLGMKEMVVPLLAGILSALRRVIAR  203 (355)
Q Consensus       126 ~lf~g~~~~~~k~rG~~l~~igvl~lLs~g--w~~~~~~pf~lfd~d~~~~~~~~~lG~~Dv~Lli~a~~l~a~~~~~sR  203 (355)
                      .++.+++-+.+. -       ..++.++-|  -+..+..+||                ..-++.-+++.+..+.+...++
T Consensus       128 ~~~~~~~~s~~~-~-------lsL~piv~GV~ias~~e~~fn----------------~~G~i~a~~s~~~~al~~I~~~  183 (316)
T KOG1441|consen  128 VLLLGKTYSSMT-Y-------LSLLPIVFGVAIASVTELSFN----------------LFGFISAMISNLAFALRNILSK  183 (316)
T ss_pred             HHHhCCCCcceE-E-------EEEEEeeeeEEEeeecccccc----------------HHHHHHHHHHHHHHHHHHHHHH
Confidence            999998755443 3       223334444  3445666666                3335578899999999999999


Q ss_pred             hhhhh---cccchhHHHHHHHHHHHHHh-HHHHHHhhhcc----CCCCCCcchhHHHHHHHHHHHHHHHHHHHHH---HH
Q 018509          204 RVSLK---ITLKRRLHAITITSATCFLF-PVAMWDLIIGS----KSSSSVDLPFSAWAFLSTTLFGIILIFYVDA---MA  272 (355)
Q Consensus       204 r~s~~---~gg~kRL~Alt~l~stv~L~-P~al~~~~~~~----~s~~s~~~~~~~w~~l~~~vF~~VL~fyves---i~  272 (355)
                      ++.++   ...+-.+-.+...++.++|+ ||...+....-    ....+    ...+......    ++.|...-   .+
T Consensus       184 ~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~----~~~~~~~~~s----v~~f~~Nls~f~~  255 (316)
T KOG1441|consen  184 KLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWF----VTFLILLLNS----VLAFLLNLSAFLV  255 (316)
T ss_pred             HhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccc----hhhHHHHHHH----HHHHHHHHHHHHH
Confidence            99842   33888999999999999999 88776543221    11111    1112111111    33333222   22


Q ss_pred             hhhhcccccCcchhhhhHHHHHHHHHHhccccchHHHHHHHHHHhhhhhcccccC
Q 018509          273 EERLHMVFSSPRHLMVAGGCIIVMEMVYKMDFSLIGFIICSLILGFGIYEATSLD  327 (355)
Q Consensus       273 ~~rl~~~~ss~r~~lV~~~c~iv~e~~~~~~~sl~g~lic~~ll~~gv~~~t~~~  327 (355)
                      ..|..+..=+.-..+=..+-+.+.-++.++..|..+ ..|.++=+.|+..=+..+
T Consensus       256 ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n-~~G~~iai~Gv~~Y~~~k  309 (316)
T KOG1441|consen  256 IGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLN-ALGYAIAILGVFLYSRAK  309 (316)
T ss_pred             HcccCchhhhhhccceEEEEEEeEeeeecCCCchhh-HHHHHHHHHHHHHHHHHh
Confidence            333333221111111112222333367788999999 999999999998666544

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=96.94  E-value=0.021  Score=48.67  Aligned_cols=134  Identities=15%  Similarity=0.054  Sum_probs=96.5

Q ss_pred             HHHHHHHHHHHHHHHHhhhhhhh------cccchhHHHHHHHHHHHHHhHHHHHHhhhccCCCCCC------cchhHHHH
Q 018509          186 VVPLLAGILSALRRVIARRVSLK------ITLKRRLHAITITSATCFLFPVAMWDLIIGSKSSSSV------DLPFSAWA  253 (355)
Q Consensus       186 ~Lli~a~~l~a~~~~~sRr~s~~------~gg~kRL~Alt~l~stv~L~P~al~~~~~~~~s~~s~------~~~~~~w~  253 (355)
                      ++.++|.++.++|.+..++...+      ..++-.+..+....++++++|++...-..........      ......|.
T Consensus         3 ~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~   82 (153)
T PF03151_consen    3 ILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIF   82 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHH
Confidence            46789999999999999999877      3488889999999999999998765432221111100      00112233


Q ss_pred             H-HHHHHHHHHHHHHHHHHHhhhhcccccCcchhhhhHHHHHHHHHHhccccchHHHHHHHHHHhhhhh
Q 018509          254 F-LSTTLFGIILIFYVDAMAEERLHMVFSSPRHLMVAGGCIIVMEMVYKMDFSLIGFIICSLILGFGIY  321 (355)
Q Consensus       254 ~-l~~~vF~~VL~fyvesi~~~rl~~~~ss~r~~lV~~~c~iv~e~~~~~~~sl~g~lic~~ll~~gv~  321 (355)
                      . +...+++. +--+.+..+.++..+...+.-.++=....++....+++|++|..+ .+|.++...|+.
T Consensus        83 ~~~~~~~~~~-~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~-~~G~~l~~~G~~  149 (153)
T PF03151_consen   83 LLILSGLLAF-LYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQ-IIGIVLALVGVL  149 (153)
T ss_pred             HHHHHHHHHH-HHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHH-HHHHHHHHHHHh
Confidence            3 33333333 444677778888888877777777778888899999999999999 999998888875

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK11689 aromatic amino acid exporter; Provisional

Probab=96.80  E-value=0.026  Score=54.27  Aligned_cols=78  Identities=9%  Similarity=0.080  Sum_probs=68.6

Q ss_pred             CCCcccchhhHHHHHHHHHHHHHHHHhcccccchhhHHH-hhhhhhHHHHHHHHHhCCCCCcchhhHHHHHHHHHHHHh
Q 018509           75 RPLLNTQMVPSVINGGITALYFILWGKGLKSCGPVRALL-AEYSGAVLGVLSAVLYGRRGHVWKKVGGLIAILASFYFL  152 (355)
Q Consensus        75 ~~l~~~Qw~~il~~gvv~~l~~lLwf~gL~~cGplrsiL-~e~s~~Vl~~Ls~lf~g~~~~~~k~rG~~l~~igvl~lL  152 (355)
                      ...+..+|..++..++.+++-..+|+.++|+.||.++.. .-..|++..+++.+++||..++.+..|+++.+.|+++..
T Consensus       208 ~~~~~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~  286 (295)
T PRK11689        208 MVFSLPAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCW  286 (295)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHh
Confidence            345667898888888766688999999999999999999 778888888889999999999999999999999988774

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=96.66  E-value=0.047  Score=52.30  Aligned_cols=75  Identities=12%  Similarity=-0.039  Sum_probs=67.2

Q ss_pred             cccchhhHHHHHHHHH-HHHHHHHhcccccchhhHHH-hhhhhhHHHHHHHHHhCCCCCcchhhHHHHHHHHHHHHh
Q 018509           78 LNTQMVPSVINGGITA-LYFILWGKGLKSCGPVRALL-AEYSGAVLGVLSAVLYGRRGHVWKKVGGLIAILASFYFL  152 (355)
Q Consensus        78 ~~~Qw~~il~~gvv~~-l~~lLwf~gL~~cGplrsiL-~e~s~~Vl~~Ls~lf~g~~~~~~k~rG~~l~~igvl~lL  152 (355)
                      ..+.|..++..|+++. +-..+|++++|+.+|-+..+ .-..|+...+++.++++|..++.+..|+++.+.|+++.-
T Consensus       208 ~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~  284 (292)
T PRK11272        208 TLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVT  284 (292)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHH
Confidence            4467888899999876 88889999999999998888 888999999999999999999999999999999998874

>COG2510 Predicted membrane protein [Function unknown]

Probab=96.62  E-value=0.021  Score=50.55  Aligned_cols=105  Identities=15%  Similarity=0.201  Sum_probs=87.9

Q ss_pred             CchhhHHHHHHHHHHHHHHHHhcCCC-CCCCCcccchhhHHHHHHHHHHHHHHHHhcccccchhhHHH-hhhhhhHHHHH
Q 018509           47 GVSVILFIFCCLVPSSILFLLLQKPW-KGRPLLNTQMVPSVINGGITALYFILWGKGLKSCGPVRALL-AEYSGAVLGVL  124 (355)
Q Consensus        47 p~~lv~f~Fl~~l~ss~~~l~~qkP~-~g~~l~~~Qw~~il~~gvv~~l~~lLwf~gL~~cGplrsiL-~e~s~~Vl~~L  124 (355)
                      |..-+.-|=++.+.....++..+++| .+..+.++.|..++.-|+.+.+.-+++|.+++.=-+-+-+= ...+++...++
T Consensus        31 p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf~ALk~G~as~VvPldk~svvl~~ll  110 (140)
T COG2510          31 PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLL  110 (140)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHH
Confidence            45555667777777788889999999 66679999999999999999999999999998755444443 77777788889


Q ss_pred             HHHHhCCCCCcchhhHHHHHHHHHHHH
Q 018509          125 SAVLYGRRGHVWKKVGGLIAILASFYF  151 (355)
Q Consensus       125 s~lf~g~~~~~~k~rG~~l~~igvl~l  151 (355)
                      |.+|+||+.+..+.+|.++..+|++.+
T Consensus       111 s~lfL~E~ls~~~~iG~~LI~~Gailv  137 (140)
T COG2510         111 SILFLGERLSLPTWIGIVLIVIGAILV  137 (140)
T ss_pred             HHHHhcCCCCHHHHHHHHHHHhCeeeE
Confidence            999999999999999999999988764

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=96.60  E-value=0.029  Score=56.31  Aligned_cols=68  Identities=18%  Similarity=0.279  Sum_probs=60.3

Q ss_pred             HHHHHHHHHHHHHHHHhcccccchhhHHH-hhhhhhHHHHHHHHHhCCCCCcchhhHHHHHHHHHHHHh
Q 018509           85 SVINGGITALYFILWGKGLKSCGPVRALL-AEYSGAVLGVLSAVLYGRRGHVWKKVGGLIAILASFYFL  152 (355)
Q Consensus        85 il~~gvv~~l~~lLwf~gL~~cGplrsiL-~e~s~~Vl~~Ls~lf~g~~~~~~k~rG~~l~~igvl~lL  152 (355)
                      ++..++...+...+|+++++.-||.++.+ .-..|++..+++++++||..++.+..|+++.+.|++...
T Consensus       259 i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~  327 (358)
T PLN00411        259 IVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVM  327 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence            55566655577789999999999999999 999999999999999999999999999999999998764

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=96.50  E-value=0.05  Score=55.52  Aligned_cols=226  Identities=16%  Similarity=0.154  Sum_probs=147.1

Q ss_pred             hHHHHHHHHHHHHHHHH-------hcccccchh-hHHHhhhhhhHHHHHHHHHhCCCCCcchhhHHHHHHHHHHHHhhcc
Q 018509           84 PSVINGGITALYFILWG-------KGLKSCGPV-RALLAEYSGAVLGVLSAVLYGRRGHVWKKVGGLIAILASFYFLSQG  155 (355)
Q Consensus        84 ~il~~gvv~~l~~lLwf-------~gL~~cGpl-rsiL~e~s~~Vl~~Ls~lf~g~~~~~~k~rG~~l~~igvl~lLs~g  155 (355)
                      .+.+.++.-|   .+||       .+|.++.-- .++|...|+.-+-.+++.|-+|+.+.+|..+.++.+.|++..-.++
T Consensus       157 ~~ak~sl~fc---~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~  233 (416)
T KOG2765|consen  157 QTAKLSLFFC---PLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGD  233 (416)
T ss_pred             HHHHHHHHHH---HHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEecc
Confidence            4455555444   5565       688888766 7788888888666778889999999999999999999999998777


Q ss_pred             -cccccccCCccCCcchHhhhhhhhhccchhHHHHHHHHHHHHHHHHhhhhhhhcc---cchhHHHHHHHHHHHHHhHHH
Q 018509          156 -WATETSSPFSFKDSLDAELRTEQVLGMKEMVVPLLAGILSALRRVIARRVSLKIT---LKRRLHAITITSATCFLFPVA  231 (355)
Q Consensus       156 -w~~~~~~pf~lfd~d~~~~~~~~~lG~~Dv~Lli~a~~l~a~~~~~sRr~s~~~g---g~kRL~Alt~l~stv~L~P~a  231 (355)
                       ||.-+..|-             +.+ +||+ +-+++-.+-++|-++.||-.-+.|   .-+....+.-++..+++-|++
T Consensus       234 s~~~~~~~a~-------------~~l-lG~l-laL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l  298 (416)
T KOG2765|consen  234 SKQNSDLPAS-------------RPL-LGNL-LALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPL  298 (416)
T ss_pred             ccccccCCcc-------------chh-HHHH-HHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHH
Confidence             883222221             122 5666 667777888899999999987775   335566788888999999988


Q ss_pred             HHHhhhccCCCCCCcchhHH-HHH-HHHHHHHHHHHHHHHHHHhhhhcccccCcc----hhhhhHHHHHHHHHHh-cccc
Q 018509          232 MWDLIIGSKSSSSVDLPFSA-WAF-LSTTLFGIILIFYVDAMAEERLHMVFSSPR----HLMVAGGCIIVMEMVY-KMDF  304 (355)
Q Consensus       232 l~~~~~~~~s~~s~~~~~~~-w~~-l~~~vF~~VL~fyvesi~~~rl~~~~ss~r----~~lV~~~c~iv~e~~~-~~~~  304 (355)
                      ......+   .+.-.++... ... +.....+.|+.=|.|..+     ..-+++-    ..-+++--++++-.+. +-.+
T Consensus       299 ~iL~~~~---~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a-----~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~  370 (416)
T KOG2765|consen  299 IILDFFG---EERFELPSSTQFSLVVFNNLIGTVVSDYLWAKA-----VLLTSPLVVTLGMSLTIPLAMFADVLIKGKHP  370 (416)
T ss_pred             HHHHHhc---cCcccCCCCceeEeeeHhhHHHHHHHHHHHHHH-----HHhccchhheeeeeEeeeHHHHHHHHHcCCCC
Confidence            8877663   2221112111 111 333356666666666433     2222221    1112333455666666 7778


Q ss_pred             chHHHHHHHHHHhhhhhcccccC-CCCCCCCCC
Q 018509          305 SLIGFIICSLILGFGIYEATSLD-HGRKDTFQK  336 (355)
Q Consensus       305 sl~g~lic~~ll~~gv~~~t~~~-~~~~~~~~~  336 (355)
                      |++. .+|+..+..|-....... .++|+++.+
T Consensus       371 S~~~-iiGsi~Ifv~Fv~vn~~~~~~~~~~~~~  402 (416)
T KOG2765|consen  371 SALY-IIGSIPIFVGFVIVNISSENSKKDPLMA  402 (416)
T ss_pred             CHHH-HHHHHHHHHHHhheeccccccccccchh
Confidence            8887 999998888877555433 445544443

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=96.30  E-value=0.1  Score=50.06  Aligned_cols=75  Identities=12%  Similarity=-0.074  Sum_probs=65.3

Q ss_pred             cccchhhHHHHHHHHH-HHHHHHHhcccccchhhHHH-hhhhhhHHHHHHHHHhCCCCCcchhhHHHHHHHHHHHHh
Q 018509           78 LNTQMVPSVINGGITA-LYFILWGKGLKSCGPVRALL-AEYSGAVLGVLSAVLYGRRGHVWKKVGGLIAILASFYFL  152 (355)
Q Consensus        78 ~~~Qw~~il~~gvv~~-l~~lLwf~gL~~cGplrsiL-~e~s~~Vl~~Ls~lf~g~~~~~~k~rG~~l~~igvl~lL  152 (355)
                      +...|...+..|++++ +-..+|++++++.||-++.+ ....|.+..+++.+++||..++.+..|+.+.+.|++..-
T Consensus       204 ~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~  280 (293)
T PRK10532        204 HWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGST  280 (293)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence            3345666678899887 78889999999999999999 888888888899999999999999999999999988874

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=96.28  E-value=0.098  Score=50.30  Aligned_cols=77  Identities=13%  Similarity=0.111  Sum_probs=68.9

Q ss_pred             CCcccchhhHHHHHHHHH-HHHHHHHhcccccchhhHHH-hhhhhhHHHHHHHHHhCCCCCcchhhHHHHHHHHHHHHh
Q 018509           76 PLLNTQMVPSVINGGITA-LYFILWGKGLKSCGPVRALL-AEYSGAVLGVLSAVLYGRRGHVWKKVGGLIAILASFYFL  152 (355)
Q Consensus        76 ~l~~~Qw~~il~~gvv~~-l~~lLwf~gL~~cGplrsiL-~e~s~~Vl~~Ls~lf~g~~~~~~k~rG~~l~~igvl~lL  152 (355)
                      ..+.++|..++..|++++ +-..+|+.+++..+|-++.. ....|.+..+++.+++||..+..+..|+++.+.|++...
T Consensus       208 ~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~  286 (299)
T PRK11453        208 TIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINV  286 (299)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHh
Confidence            345578999999998888 78889999999999999888 989999999999999999999999999999999997654

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=96.08  E-value=0.08  Score=50.93  Aligned_cols=129  Identities=9%  Similarity=-0.015  Sum_probs=97.4

Q ss_pred             HHHHHHHHHHHHHHHhhhhhhhcccchhHHHHHHHHHHHHHhHHHHHHhhhccC--CCCCCcchhHHHHHHHHHHHHHHH
Q 018509          187 VPLLAGILSALRRVIARRVSLKITLKRRLHAITITSATCFLFPVAMWDLIIGSK--SSSSVDLPFSAWAFLSTTLFGIIL  264 (355)
Q Consensus       187 Lli~a~~l~a~~~~~sRr~s~~~gg~kRL~Alt~l~stv~L~P~al~~~~~~~~--s~~s~~~~~~~w~~l~~~vF~~VL  264 (355)
                      ..+++.++|+......|.. .+. ++.-+.++-.+++++++.|......-....  +..+    ...|.......++...
T Consensus        12 ~~l~a~~~wg~~~~~~k~~-~~~-~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~   85 (296)
T PRK15430         12 LALAAYFIWGIAPAYFKLI-YYV-PADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQT----PQKIFMLAVSAVLIGG   85 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHh-cCC-CHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcC----HHHHHHHHHHHHHHHH
Confidence            7889999999999999754 344 788899999999999888876543110000  0001    1222223345566777


Q ss_pred             HHHHHHHHhhhhcccccCcchhhhhHHHHHHHHHHhccccchHHHHHHHHHHhhhhhc
Q 018509          265 IFYVDAMAEERLHMVFSSPRHLMVAGGCIIVMEMVYKMDFSLIGFIICSLILGFGIYE  322 (355)
Q Consensus       265 ~fyvesi~~~rl~~~~ss~r~~lV~~~c~iv~e~~~~~~~sl~g~lic~~ll~~gv~~  322 (355)
                      .++....+.++.....++.-.+..|++.++...++++|+++..+ .++.++-..|+..
T Consensus        86 ~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~-~~g~~l~~~Gv~l  142 (296)
T PRK15430         86 NWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQ-WLAVILAICGVLV  142 (296)
T ss_pred             HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHH-HHHHHHHHHHHHH
Confidence            88888999999999999999999999999999999999999999 8888888888774

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=95.92  E-value=0.44  Score=45.45  Aligned_cols=120  Identities=13%  Similarity=0.086  Sum_probs=83.2

Q ss_pred             cchhhHHHHHHHHHHHHHHHHhcccccchhhHHH-hhhhhhHHHHHHHHHhCCCCCcchhhHHHHHHHHHHHHhhccccc
Q 018509           80 TQMVPSVINGGITALYFILWGKGLKSCGPVRALL-AEYSGAVLGVLSAVLYGRRGHVWKKVGGLIAILASFYFLSQGWAT  158 (355)
Q Consensus        80 ~Qw~~il~~gvv~~l~~lLwf~gL~~cGplrsiL-~e~s~~Vl~~Ls~lf~g~~~~~~k~rG~~l~~igvl~lLs~gw~~  158 (355)
                      ++..+....|++-++-+.|-+.++++.-|.---+ ....-..+++++.++++++.++.|-.+.++.+.|+...=.+    
T Consensus        15 ~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~----   90 (244)
T PF04142_consen   15 KDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLS----   90 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecC----
Confidence            4566788889999999999999999999885544 55544599999999999999999999999888888776311    


Q ss_pred             ccccCCccCCcchH--h---h-hhhhhhccchhHHHHHHHHHHHHHHHHhhhhhhhcc
Q 018509          159 ETSSPFSFKDSLDA--E---L-RTEQVLGMKEMVVPLLAGILSALRRVIARRVSLKIT  210 (355)
Q Consensus       159 ~~~~pf~lfd~d~~--~---~-~~~~~lG~~Dv~Lli~a~~l~a~~~~~sRr~s~~~g  210 (355)
                          +..--|+++.  .   + ..+...|   +...+++.++++.-.+..-|+.++.+
T Consensus        91 ----~~~~~~~~~~~~~~~~~~~~~~~~G---~~~vl~~~~~S~~agVy~E~~lK~~~  141 (244)
T PF04142_consen   91 ----SSQSSDNSSSSSVHHDASNQNPLLG---LLAVLAAAFLSGFAGVYFEKLLKRSN  141 (244)
T ss_pred             ----CccccccccccccccccccchhHhH---HHHHHHHHHHHHHHHHHHHHHhcccc
Confidence                1000011111  1   0 1112343   33667777788888888777776553

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=95.67  E-value=0.18  Score=42.86  Aligned_cols=71  Identities=14%  Similarity=0.206  Sum_probs=63.0

Q ss_pred             cchhhHHHHHHHHHHHHHHHHhcccccchhhHHH-hhhhhhHHHHHHHHHhCCCCCcchhhHHHHHHHHHHH
Q 018509           80 TQMVPSVINGGITALYFILWGKGLKSCGPVRALL-AEYSGAVLGVLSAVLYGRRGHVWKKVGGLIAILASFY  150 (355)
Q Consensus        80 ~Qw~~il~~gvv~~l~~lLwf~gL~~cGplrsiL-~e~s~~Vl~~Ls~lf~g~~~~~~k~rG~~l~~igvl~  150 (355)
                      +-+..++..|+.+.++++.-|.-+++++|+.... +.....+..+++.++++|+.++.+..|.++.+.|++.
T Consensus        79 ~~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~  150 (153)
T PF03151_consen   79 NFIFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence            4566777788888899999999999999996666 8889988889999999999999999999999999864

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=95.39  E-value=0.16  Score=49.14  Aligned_cols=108  Identities=16%  Similarity=0.213  Sum_probs=76.1

Q ss_pred             hhccCCchhhHHHHHHHHHHHHHHHHhcCCCCCCCCcccchhhHHHHHHHHHHHHHHHHhccc-ccchhhHHH-hhhhhh
Q 018509           42 YLSQTGVSVILFIFCCLVPSSILFLLLQKPWKGRPLLNTQMVPSVINGGITALYFILWGKGLK-SCGPVRALL-AEYSGA  119 (355)
Q Consensus        42 ~l~~~p~~lv~f~Fl~~l~ss~~~l~~qkP~~g~~l~~~Qw~~il~~gvv~~l~~lLwf~gL~-~cGplrsiL-~e~s~~  119 (355)
                      .++.+|.+.++.-+..-+..+..+....+ . .++.+++.+.+.+..|++..+-+.+++.|++ +-|+-++.. +...|+
T Consensus       173 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pv  250 (290)
T TIGR00776       173 AFGVDGLSVLLPQAIGMVIGGIIFNLGHI-L-AKPLKKYAILLNILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVI  250 (290)
T ss_pred             HcCCCcceehhHHHHHHHHHHHHHHHHHh-c-ccchHHHHHHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHH
Confidence            44567777766555433433333333432 1 1222344444555578886677889999999 999998888 777787


Q ss_pred             HHHHHHHHHhCCCCCcchh----hHHHHHHHHHHHH
Q 018509          120 VLGVLSAVLYGRRGHVWKK----VGGLIAILASFYF  151 (355)
Q Consensus       120 Vl~~Ls~lf~g~~~~~~k~----rG~~l~~igvl~l  151 (355)
                      +.++.+.++++|+-++++.    .|.++.+.|+++.
T Consensus       251 ia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~  286 (290)
T TIGR00776       251 ISTLGGILILGEKKTKREMIAISVGIILIIIAANIL  286 (290)
T ss_pred             HHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHH
Confidence            8888899999999999998    9999988888775

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>TIGR00688 rarD rarD protein

Probab=95.39  E-value=0.32  Score=45.36  Aligned_cols=131  Identities=12%  Similarity=-0.002  Sum_probs=93.5

Q ss_pred             hHHHHHHHHHHHHHHHHhhhhhhhcccchhHHHHHHHHHHHHHhHHHHHHhhh----ccCCCCCCcchhHHHHHHHHHHH
Q 018509          185 MVVPLLAGILSALRRVIARRVSLKITLKRRLHAITITSATCFLFPVAMWDLII----GSKSSSSVDLPFSAWAFLSTTLF  260 (355)
Q Consensus       185 v~Lli~a~~l~a~~~~~sRr~s~~~gg~kRL~Alt~l~stv~L~P~al~~~~~----~~~s~~s~~~~~~~w~~l~~~vF  260 (355)
                      +...+++.++|..-....|.. .+. ++--+..+=.++++++++|+.....-.    ...+...   ....|........
T Consensus         4 ~~~~i~a~~~wg~~~~~~k~~-~~~-~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~   78 (256)
T TIGR00688         4 IIVSLLASFLFGYMYYYSKLL-KPL-PATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQ---KRPLILSLLLCGL   78 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHh-ccC-CHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcc---cchHHHHHHHHHH
Confidence            347889999999999999974 344 788888888999998888876442100    0000011   1222333222222


Q ss_pred             HHHHHHHHHHHHhhhhcccccCcchhhhhHHHHHHHHHHhccccchHHHHHHHHHHhhhhh
Q 018509          261 GIILIFYVDAMAEERLHMVFSSPRHLMVAGGCIIVMEMVYKMDFSLIGFIICSLILGFGIY  321 (355)
Q Consensus       261 ~~VL~fyvesi~~~rl~~~~ss~r~~lV~~~c~iv~e~~~~~~~sl~g~lic~~ll~~gv~  321 (355)
                      ...+.++....+.++.....++.-....|++.+++.-++++|+++..+ .++.++-..||.
T Consensus        79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~-~l~~~~~~~Gv~  138 (256)
T TIGR00688        79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQ-FIAVIIATLGVI  138 (256)
T ss_pred             HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH-HHHHHHHHHHHH
Confidence            266777778888899988888888999999999999999999999998 777666666765

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=94.86  E-value=0.35  Score=40.80  Aligned_cols=67  Identities=9%  Similarity=-0.095  Sum_probs=59.8

Q ss_pred             HHHHHHHHHHHHHHHHhhhhcccccCcchhhhhHHHHHHHHHHhccccchHHHHHHHHHHhhhhhccc
Q 018509          257 TTLFGIILIFYVDAMAEERLHMVFSSPRHLMVAGGCIIVMEMVYKMDFSLIGFIICSLILGFGIYEAT  324 (355)
Q Consensus       257 ~~vF~~VL~fyvesi~~~rl~~~~ss~r~~lV~~~c~iv~e~~~~~~~sl~g~lic~~ll~~gv~~~t  324 (355)
                      ..+..+.+.||....+-++++...+.+-...-+...++...++++|++|..+ .+|-.+++.||-...
T Consensus        42 ~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~-~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         42 LALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRH-WCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH-HHHHHHHHHHHHHHh
Confidence            3446778899999999999999999999988889999999999999999999 999999999986443

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=94.47  E-value=1.2  Score=40.92  Aligned_cols=78  Identities=19%  Similarity=0.301  Sum_probs=66.0

Q ss_pred             CCCcccchhhHHHHHHHHH-HHHHHHHhcccccchhhHHHhhhhhhHHHHH-HHHHhCCCCCcchhhHHHHHHHHHHHHh
Q 018509           75 RPLLNTQMVPSVINGGITA-LYFILWGKGLKSCGPVRALLAEYSGAVLGVL-SAVLYGRRGHVWKKVGGLIAILASFYFL  152 (355)
Q Consensus        75 ~~l~~~Qw~~il~~gvv~~-l~~lLwf~gL~~cGplrsiL~e~s~~Vl~~L-s~lf~g~~~~~~k~rG~~l~~igvl~lL  152 (355)
                      .+....+|......|+++. +-..+|+++++.-++.+.....+...+.+.+ +.++++|+.++++..|+.+.+.|++...
T Consensus       207 ~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~  286 (292)
T COG0697         207 APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLAS  286 (292)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHh
Confidence            5667788999999999999 6999999999999999988855666655554 9999999999999999988888887764

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=94.33  E-value=0.28  Score=41.36  Aligned_cols=74  Identities=15%  Similarity=0.022  Sum_probs=55.0

Q ss_pred             cccchhhHHHHHH--HHH-HHHHHHHhcccccchh-hHHH-hhhhhhHHHHHHHHHhCCCCCcchhhHHHHHHHHHHHHh
Q 018509           78 LNTQMVPSVINGG--ITA-LYFILWGKGLKSCGPV-RALL-AEYSGAVLGVLSAVLYGRRGHVWKKVGGLIAILASFYFL  152 (355)
Q Consensus        78 ~~~Qw~~il~~gv--v~~-l~~lLwf~gL~~cGpl-rsiL-~e~s~~Vl~~Ls~lf~g~~~~~~k~rG~~l~~igvl~lL  152 (355)
                      .++.|..+...++  ++. +...+|-.+++.- |+ .+-. .+.+++...+++.++++|+.+..|..|..+.+.|++++-
T Consensus        30 ~~~~~~~l~~~~~~~~~~~l~~~~~~~al~~i-plg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         30 GKRRKHIVLWLGLALACLGLAMVLWLLVLQNV-PVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             chhhhHHHHHHHHHHHHHHHHHHHHHHHHhhC-ChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            3444544444433  433 7888999999985 55 4444 556667788889999999999999999999999998763

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=94.25  E-value=0.32  Score=48.41  Aligned_cols=69  Identities=14%  Similarity=0.224  Sum_probs=56.6

Q ss_pred             hhHHHHHHHHHHHHHHHH----hcccccchhhHHH-hhhhhhHHHHHHHHHhCCCCCcchhhHHHHHHHHHHHH
Q 018509           83 VPSVINGGITALYFILWG----KGLKSCGPVRALL-AEYSGAVLGVLSAVLYGRRGHVWKKVGGLIAILASFYF  151 (355)
Q Consensus        83 ~~il~~gvv~~l~~lLwf----~gL~~cGplrsiL-~e~s~~Vl~~Ls~lf~g~~~~~~k~rG~~l~~igvl~l  151 (355)
                      ..++...+.+++...+|.    .+++.++|+++.. +-..|++..+++.+++||..++.+..|+++.+.|++..
T Consensus       273 ~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lY  346 (350)
T PTZ00343        273 GIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLY  346 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHH
Confidence            334444445556666666    5999999999999 88888888888999999999999999999999999764

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=93.83  E-value=3.4  Score=41.43  Aligned_cols=268  Identities=16%  Similarity=0.157  Sum_probs=151.9

Q ss_pred             HHHHHHHHhHhhhhcc----CC--------chhhHHHHHHHHHHHHHHHHhcCCCCCCCCcccchhhHHHHHHHHHHHHH
Q 018509           30 FLRIWSVYSMYRYLSQ----TG--------VSVILFIFCCLVPSSILFLLLQKPWKGRPLLNTQMVPSVINGGITALYFI   97 (355)
Q Consensus        30 ~lr~~~i~~~y~~l~~----~p--------~~lv~f~Fl~~l~ss~~~l~~qkP~~g~~l~~~Qw~~il~~gvv~~l~~l   97 (355)
                      +.=+++-|..|-.++.    .|        -|..+..|+=.+.+.+.-...-|-|+.....+.-|.+.-..|+.+.+...
T Consensus        19 ~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~~~~~apl~~y~~is~tn~~s~~   98 (327)
T KOG1581|consen   19 FSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKWWKKELSGVAPLYKYSLISFTNTLSSW   98 (327)
T ss_pred             HHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhcccccCCCCCchhHHhHHHHHhhcchH
Confidence            3445555555556654    11        24445555555554443333333333345555666666777999999999


Q ss_pred             HHHhcccccchhhHHHhhhhhhHHHHH-HHHHhCCCCCcchhhHHHHHHHHHHHHhhcccccccccCCccCCcchHhhhh
Q 018509           98 LWGKGLKSCGPVRALLAEYSGAVLGVL-SAVLYGRRGHVWKKVGGLIAILASFYFLSQGWATETSSPFSFKDSLDAELRT  176 (355)
Q Consensus        98 Lwf~gL~~cGplrsiL~e~s~~Vl~~L-s~lf~g~~~~~~k~rG~~l~~igvl~lLs~gw~~~~~~pf~lfd~d~~~~~~  176 (355)
                      +=+.+|||--=..-+|+..+-++...+ ..+.++++-...+-.=+++.-.|+..+.             +||++|...+.
T Consensus        99 ~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~-------------l~~~s~s~~~~  165 (327)
T KOG1581|consen   99 CGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFS-------------LFPNSDSSSKS  165 (327)
T ss_pred             HHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEE-------------EecCCCCcccc
Confidence            999999999888888888888844444 6777888877667666666666666665             89998844333


Q ss_pred             h---hhhccchhHHHHHHHHHHHHHHHHhhhhhhhcc-cchhHHHHHHHHHHHHHhHHHHHHhhhccCCCCCCc----ch
Q 018509          177 E---QVLGMKEMVVPLLAGILSALRRVIARRVSLKIT-LKRRLHAITITSATCFLFPVAMWDLIIGSKSSSSVD----LP  248 (355)
Q Consensus       177 ~---~~lG~~Dv~Lli~a~~l~a~~~~~sRr~s~~~g-g~kRL~Alt~l~stv~L~P~al~~~~~~~~s~~s~~----~~  248 (355)
                      .   ...|+.   +++..+.....-.+...++-.+.+ ++-.+--..++.+++.-.--    ....+.-.++++    |+
T Consensus       166 g~~ns~~G~~---Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~----li~qg~~~~av~F~~~hp  238 (327)
T KOG1581|consen  166 GRENSPIGIL---LLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTY----LILQGHLLPAVSFIKEHP  238 (327)
T ss_pred             CCCCchHhHH---HHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHh----hhcCCCCchHHHHHHcCh
Confidence            3   244433   555555555544444444444333 44444445555555543222    121222222211    22


Q ss_pred             hHHHHHHHHHHHH---HHHHHHHHHHHhhhhcccccCcchhhhh--HHHHHHHHHHhccccchHHHHHHHHHHhhhhhcc
Q 018509          249 FSAWAFLSTTLFG---IILIFYVDAMAEERLHMVFSSPRHLMVA--GGCIIVMEMVYKMDFSLIGFIICSLILGFGIYEA  323 (355)
Q Consensus       249 ~~~w~~l~~~vF~---~VL~fyvesi~~~rl~~~~ss~r~~lV~--~~c~iv~e~~~~~~~sl~g~lic~~ll~~gv~~~  323 (355)
                      --+|-.+.-+..+   =..+||    -+||-|+..=.  --+.|  ++.++++-.+++-++|..| -+|.+++.-|++.-
T Consensus       239 ~~~~Di~l~s~~gavGQ~FI~~----TI~~FGslt~t--~I~ttRk~~si~lS~i~f~h~~s~~q-~~g~~iVFg~i~l~  311 (327)
T KOG1581|consen  239 DVAFDILLYSTCGAVGQLFIFY----TIERFGSLTFT--TIMTTRKMVSIMLSCIVFGHPLSSEQ-WLGVLIVFGGIFLE  311 (327)
T ss_pred             hHHHHHHHHHHhhhhhhheehh----hHhhcccHHHH--HHHHHHHHHHHHHHHHHhCCccchhh-ccCeeeehHHHHHH
Confidence            3333222222222   233332    23444442100  01122  6788888899999999999 89999988888744


Q ss_pred             c
Q 018509          324 T  324 (355)
Q Consensus       324 t  324 (355)
                      .
T Consensus       312 ~  312 (327)
T KOG1581|consen  312 I  312 (327)
T ss_pred             H
Confidence            3

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=93.79  E-value=4.9  Score=39.45  Aligned_cols=199  Identities=12%  Similarity=0.157  Sum_probs=119.4

Q ss_pred             HhcccccchhhHHH-hhhhhhHHHHHHHHHhCCCCCcchhhHHHHHHHHHHHHhhcccccccccCCccCCcchHhhhhhh
Q 018509          100 GKGLKSCGPVRALL-AEYSGAVLGVLSAVLYGRRGHVWKKVGGLIAILASFYFLSQGWATETSSPFSFKDSLDAELRTEQ  178 (355)
Q Consensus       100 f~gL~~cGplrsiL-~e~s~~Vl~~Ls~lf~g~~~~~~k~rG~~l~~igvl~lLs~gw~~~~~~pf~lfd~d~~~~~~~~  178 (355)
                      ..+|+|-.=...+| -.-.|+ ...+-.++.++|..+|++--.++.++..+.+.             ....++--.-++|
T Consensus       103 N~Alq~vpYPTqVlgKScKPI-PVMilGVl~~~KsY~w~kY~cVL~IV~GValF-------------mYK~~Kv~g~e~~  168 (337)
T KOG1580|consen  103 NQALQYVPYPTQVLGKSCKPI-PVMILGVLFAHKSYHWRKYCCVLMIVVGVALF-------------MYKENKVGGAEDK  168 (337)
T ss_pred             cchhcccCCcHHHhcccCCCc-ceeeeehhhhcccccHHHHHHHHHHHHHHHHh-------------hccccccCCCccc
Confidence            47788877667777 444454 11122334556678888888777777666664             3332222233346


Q ss_pred             hhccchhHHHHHHHHHHHHHHHHhhhhhhhcc--cchhHHHHHHH-----HHHHHHhHHHHHHhhhccCCCCCCcchhHH
Q 018509          179 VLGMKEMVVPLLAGILSALRRVIARRVSLKIT--LKRRLHAITIT-----SATCFLFPVAMWDLIIGSKSSSSVDLPFSA  251 (355)
Q Consensus       179 ~lG~~Dv~Lli~a~~l~a~~~~~sRr~s~~~g--g~kRL~Alt~l-----~stv~L~P~al~~~~~~~~s~~s~~~~~~~  251 (355)
                      -.|.+++ ++++++-+..+-..+.-|.-..++  |..+.. ++.+     .++.+++-=-+||.+.+...     ++..+
T Consensus       169 t~g~GEl-LL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~-~~NlwStL~Lg~g~lfTGElweF~yF~~R-----hP~~~  241 (337)
T KOG1580|consen  169 TFGFGEL-LLILSLAMDGLTGSIQDRIRASYQRTGTSMMF-YTNLWSTLYLGAGLLFTGELWEFFYFVQR-----HPYVF  241 (337)
T ss_pred             ccchHHH-HHHHHHHhcccchhHHHHHHHhhccCchhhHH-HHHHHHHHHhhhhheehhhHHHHHHHHHh-----ccHHH
Confidence            7788888 889999888777777666655555  333333 3333     34455555566676655322     22333


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhcccccCcchhhhhHHHHHHHHHHhccccchHHHHHHHHHHhhhhh
Q 018509          252 WAFLSTTLFGIILIFYVDAMAEERLHMVFSSPRHLMVAGGCIIVMEMVYKMDFSLIGFIICSLILGFGIY  321 (355)
Q Consensus       252 w~~l~~~vF~~VL~fyvesi~~~rl~~~~ss~r~~lV~~~c~iv~e~~~~~~~sl~g~lic~~ll~~gv~  321 (355)
                      |-. ...-...+|+...-.--.+..++..-|+----=-+++++...++.+..+|.-| -+++.++..|..
T Consensus       242 ~~l-~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQ-wlgtvlVF~aL~  309 (337)
T KOG1580|consen  242 WDL-TLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQ-WLGTVLVFSALT  309 (337)
T ss_pred             HHH-HHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHH-HHHHHHHHHHhh
Confidence            433 22223445555444344455555444433222237899999999999999999 889988888765

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=93.69  E-value=1.7  Score=42.74  Aligned_cols=77  Identities=21%  Similarity=0.293  Sum_probs=57.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcchhhhhHHHHHHHHHHhccccc------hHHHHHHHHHHhhhhhc
Q 018509          249 FSAWAFLSTTLFGIILIFYVDAMAEERLHMVFSSPRHLMVAGGCIIVMEMVYKMDFS------LIGFIICSLILGFGIYE  322 (355)
Q Consensus       249 ~~~w~~l~~~vF~~VL~fyvesi~~~rl~~~~ss~r~~lV~~~c~iv~e~~~~~~~s------l~g~lic~~ll~~gv~~  322 (355)
                      ...|..+...+...+.-.|.=|-+-++-+...-.|-.+..=..+.++...+++.|++      +.+|+.|.++++.||+.
T Consensus       210 ~~~y~l~~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~l  289 (300)
T PF05653_consen  210 PLTYLLLLVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFL  289 (300)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhhe
Confidence            344555444455667777788888888888877777777667777777777776663      56778888999999999


Q ss_pred             ccc
Q 018509          323 ATS  325 (355)
Q Consensus       323 ~t~  325 (355)
                      .++
T Consensus       290 L~~  292 (300)
T PF05653_consen  290 LSS  292 (300)
T ss_pred             eec
Confidence            885

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=93.20  E-value=1.7  Score=41.62  Aligned_cols=124  Identities=8%  Similarity=0.093  Sum_probs=84.5

Q ss_pred             HHHHHHHHHhhhhhhhcccchhHHHHHHHHHHHHHhHHHHHHhhhccCCCCCCcchhHHHHH-HHHHHHHHHHHHHHHHH
Q 018509          193 ILSALRRVIARRVSLKITLKRRLHAITITSATCFLFPVAMWDLIIGSKSSSSVDLPFSAWAF-LSTTLFGIILIFYVDAM  271 (355)
Q Consensus       193 ~l~a~~~~~sRr~s~~~gg~kRL~Alt~l~stv~L~P~al~~~~~~~~s~~s~~~~~~~w~~-l~~~vF~~VL~fyvesi  271 (355)
                      +++..+...-|....+...|--+..+-.+++++.+.+.  +.....  +...  ....-|.. +-+.++ ..+++..+|.
T Consensus        12 ~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~--~~~~~~~~~~~~g~~-~~~~~~~~~~   84 (302)
T TIGR00817        12 FLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLS--WSSGLP--KRLK--ISSALLKLLLPVAIV-HTIGHVTSNV   84 (302)
T ss_pred             HHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHH--HHhCCC--CCCC--CCHHHHHHHHHHHHH-HHHHHHHHHH
Confidence            34444444444444433566666666666666655443  221111  1111  12334555 555555 4777889999


Q ss_pred             HhhhhcccccCcchhhhhHHHHHHHHHHhccccchHHHHHHHHHHhhhhhccc
Q 018509          272 AEERLHMVFSSPRHLMVAGGCIIVMEMVYKMDFSLIGFIICSLILGFGIYEAT  324 (355)
Q Consensus       272 ~~~rl~~~~ss~r~~lV~~~c~iv~e~~~~~~~sl~g~lic~~ll~~gv~~~t  324 (355)
                      +.+....+..+.-....|+++++...++++|+++..+ .+|.++...|+....
T Consensus        85 ~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~-~~~l~l~~~Gv~l~~  136 (302)
T TIGR00817        85 SLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTL-WLSLLPIVGGVALAS  136 (302)
T ss_pred             HHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHH-HHHHHHHHHHHhhhc
Confidence            9999999999999999999999999999999999999 788899899987543

specificities overlap.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=92.92  E-value=0.15  Score=50.42  Aligned_cols=130  Identities=12%  Similarity=0.050  Sum_probs=96.4

Q ss_pred             HHHHHHHHhHhhhhccCCchhhHHHHHHHHHHHHHHHHhcCCC-CCCCCcccchhhHHHHHHHHHHHHHHHHhcccccch
Q 018509           30 FLRIWSVYSMYRYLSQTGVSVILFIFCCLVPSSILFLLLQKPW-KGRPLLNTQMVPSVINGGITALYFILWGKGLKSCGP  108 (355)
Q Consensus        30 ~lr~~~i~~~y~~l~~~p~~lv~f~Fl~~l~ss~~~l~~qkP~-~g~~l~~~Qw~~il~~gvv~~l~~lLwf~gL~~cGp  108 (355)
                      ++-..+-+.+-..+.+-|.-+.++|+++......+.++..+-+ -|.+-. |  +-++.-|+.|..=..+-++++.|-.=
T Consensus        47 ~ff~~~~vv~t~~~e~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~-R--~~LiLRg~mG~tgvmlmyya~~~msl  123 (346)
T KOG4510|consen   47 YFFNSCMVVSTKVLENDPMELASFRLLVRMLITYPCLIYYMQPVIGPEGK-R--KWLILRGFMGFTGVMLMYYALMYMSL  123 (346)
T ss_pred             HHHhhHHHhhhhhhccChhHhhhhhhhhehhhhheEEEEEeeeeecCCCc-E--EEEEeehhhhhhHHHHHHHHHhhcch
Confidence            4444455555566666678888899888888777777766665 233322 2  23344577777666677888888866


Q ss_pred             hhHHH-hhhhhhHHHHHHHHHhCCCCCcchhhHHHHHHHHHHHHhhcccccccccCCccCCcch
Q 018509          109 VRALL-AEYSGAVLGVLSAVLYGRRGHVWKKVGGLIAILASFYFLSQGWATETSSPFSFKDSLD  171 (355)
Q Consensus       109 lrsiL-~e~s~~Vl~~Ls~lf~g~~~~~~k~rG~~l~~igvl~lLs~gw~~~~~~pf~lfd~d~  171 (355)
                      -.+++ -=.+|..+..+|-++++|+-+++-..|.++.++||+++.        .=|| +|+.|+
T Consensus       124 aDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIv--------RPpF-lFG~~t  178 (346)
T KOG4510|consen  124 ADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIV--------RPPF-LFGDTT  178 (346)
T ss_pred             hheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEe--------cCCc-ccCCCc
Confidence            67777 778899999999999999999999999999999998874        5666 788763

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=92.00  E-value=3.1  Score=36.51  Aligned_cols=129  Identities=19%  Similarity=0.195  Sum_probs=92.4

Q ss_pred             HHHHHHHHHHHHHHHHhhhhhhhcccchhHHHHHHHHHHHHHhHHHHHHhhhccCCCCCCcchhHHHHHHHHHHHHHHHH
Q 018509          186 VVPLLAGILSALRRVIARRVSLKITLKRRLHAITITSATCFLFPVAMWDLIIGSKSSSSVDLPFSAWAFLSTTLFGIILI  265 (355)
Q Consensus       186 ~Lli~a~~l~a~~~~~sRr~s~~~gg~kRL~Alt~l~stv~L~P~al~~~~~~~~s~~s~~~~~~~w~~l~~~vF~~VL~  265 (355)
                      .+.++++++-+.-+..--|++.+.|.+-.-..+++.++++++..........   +.+. ....++|.++ --+++.+ .
T Consensus         4 lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~---~~~~-~~~~p~w~~l-GG~lG~~-~   77 (138)
T PF04657_consen    4 LLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP---SLAS-LSSVPWWAYL-GGLLGVF-F   77 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc---ccch-hccCChHHhc-cHHHHHH-H
Confidence            4788999999999999999999997799999999999999987776655432   1111 0124556552 1222211 1


Q ss_pred             HHHHHHHhhhhcccccCcchhhhhHHHHHHHHHH-----hccccchHHHHHHHHHHhhhhh
Q 018509          266 FYVDAMAEERLHMVFSSPRHLMVAGGCIIVMEMV-----YKMDFSLIGFIICSLILGFGIY  321 (355)
Q Consensus       266 fyvesi~~~rl~~~~ss~r~~lV~~~c~iv~e~~-----~~~~~sl~g~lic~~ll~~gv~  321 (355)
                      -+...+...|++...+..-...-=..+.++.+.+     .+.++++.. +++..++..|+.
T Consensus        78 V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r-~lG~~l~i~Gv~  137 (138)
T PF04657_consen   78 VLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRR-ILGLALMIAGVI  137 (138)
T ss_pred             HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHH-HHHHHHHHHHHh
Confidence            1234566689998877766555557788888884     788999999 999999999875

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=91.72  E-value=0.77  Score=38.02  Aligned_cols=68  Identities=10%  Similarity=0.063  Sum_probs=53.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhcccccCcchhhhhHHHHHHHHHHhccccchHHHHHHHHHHhhhhhccc
Q 018509          255 LSTTLFGIILIFYVDAMAEERLHMVFSSPRHLMVAGGCIIVMEMVYKMDFSLIGFIICSLILGFGIYEAT  324 (355)
Q Consensus       255 l~~~vF~~VL~fyvesi~~~rl~~~~ss~r~~lV~~~c~iv~e~~~~~~~sl~g~lic~~ll~~gv~~~t  324 (355)
                      ....+.+....+.....+-+..+. ..+.-.++.|.++++..-++++|+++..+ +++.++...||-.-.
T Consensus        38 ~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~-~~a~~l~~~Gv~li~  105 (113)
T PF13536_consen   38 ILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRR-WLAILLILIGVILIA  105 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHH-HHHHHHHHHHHHHHh
Confidence            333444555667777788888874 55677888999999999999999999999 889999999987544

>COG2510 Predicted membrane protein [Function unknown]

Probab=91.39  E-value=3.6  Score=36.67  Aligned_cols=116  Identities=13%  Similarity=0.021  Sum_probs=79.6

Q ss_pred             hhhhhhhcccchhHHHHHHHHHHHHHhHHHHHHhhhccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhhhccccc
Q 018509          202 ARRVSLKITLKRRLHAITITSATCFLFPVAMWDLIIGSKSSSSVDLPFSAWAFLSTTLFGIILIFYVDAMAEERLHMVFS  281 (355)
Q Consensus       202 sRr~s~~~gg~kRL~Alt~l~stv~L~P~al~~~~~~~~s~~s~~~~~~~w~~l~~~vF~~VL~fyvesi~~~rl~~~~s  281 (355)
                      .-|.-.|.-.|.--+++-+.+.++++.-+.+...-....++.+    .-.|.++..+-....++.+....+.++=.+++=
T Consensus        21 F~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~----~k~~lflilSGla~glswl~Yf~ALk~G~as~V   96 (140)
T COG2510          21 FAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIG----PKSWLFLILSGLAGGLSWLLYFRALKKGKASRV   96 (140)
T ss_pred             HHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceecccccC----cceehhhhHHHHHHHHHHHHHHHHHhcCCcceE
Confidence            3444444446666777777777777766666544333333333    334666444445566777777777777777777


Q ss_pred             CcchhhhhHHHHHHHHHHhccccchHHHHHHHHHHhhhhhc
Q 018509          282 SPRHLMVAGGCIIVMEMVYKMDFSLIGFIICSLILGFGIYE  322 (355)
Q Consensus       282 s~r~~lV~~~c~iv~e~~~~~~~sl~g~lic~~ll~~gv~~  322 (355)
                      .|-+-.=+.+.+++..+++||++|+.+ .||.+++..|+-.
T Consensus        97 vPldk~svvl~~lls~lfL~E~ls~~~-~iG~~LI~~Gail  136 (140)
T COG2510          97 VPLDKTSVVLAVLLSILFLGERLSLPT-WIGIVLIVIGAIL  136 (140)
T ss_pred             EEcccccHHHHHHHHHHHhcCCCCHHH-HHHHHHHHhCeee
Confidence            777777788889999999999999999 9999999988754

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=90.11  E-value=20  Score=35.21  Aligned_cols=232  Identities=13%  Similarity=0.143  Sum_probs=127.5

Q ss_pred             HHHHHHHHhcCCCCCCCCcccchhhHHHHHHHHHHHHHHHHhcccccchhhHHH-hhhhhh-HHHHHHHHHhCCCCCcc-
Q 018509           60 PSSILFLLLQKPWKGRPLLNTQMVPSVINGGITALYFILWGKGLKSCGPVRALL-AEYSGA-VLGVLSAVLYGRRGHVW-  136 (355)
Q Consensus        60 ~ss~~~l~~qkP~~g~~l~~~Qw~~il~~gvv~~l~~lLwf~gL~~cGplrsiL-~e~s~~-Vl~~Ls~lf~g~~~~~~-  136 (355)
                      +.++...++.+|.  .....+.|..-+.-|+.=++=.+.-|.+.++-|--|+.= ..-.-. ..++..++++||-.+.. 
T Consensus        25 i~alv~~~~~~p~--~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~  102 (269)
T PF06800_consen   25 IFALVVFLFRQPA--FSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQ  102 (269)
T ss_pred             HHHHHHHHHhCCC--cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcch
Confidence            3344445555555  222235555556666666677788888888877554433 222223 45556778888854433 


Q ss_pred             hhhHH---HHHHHHHHHHhhcccccccccCCccCCcchHhhhhhhhhccchhHHHHHHHHHHHHHHHHhhhhhhhcccch
Q 018509          137 KKVGG---LIAILASFYFLSQGWATETSSPFSFKDSLDAELRTEQVLGMKEMVVPLLAGILSALRRVIARRVSLKITLKR  213 (355)
Q Consensus       137 k~rG~---~l~~igvl~lLs~gw~~~~~~pf~lfd~d~~~~~~~~~lG~~Dv~Lli~a~~l~a~~~~~sRr~s~~~gg~k  213 (355)
                      +..|.   ++.++|+.+.-             .-|+++......+-. .+++..++++.+-...|...-|-...+--..-
T Consensus       103 ~~~G~~Al~liiiGv~lts-------------~~~~~~~~~~~~~~~-~kgi~~Ll~stigy~~Y~~~~~~~~~~~~~~~  168 (269)
T PF06800_consen  103 KIIGFLALVLIIIGVILTS-------------YQDKKSDKSSSKSNM-KKGILALLISTIGYWIYSVIPKAFHVSGWSAF  168 (269)
T ss_pred             HHHHHHHHHHHHHHHHHhc-------------cccccccccccccch-hhHHHHHHHHHHHHHHHHHHHHhcCCChhHhH
Confidence            43333   23333443332             233322211111122 44566888899999999999887665444555


Q ss_pred             hHHHHHHHHHHHHHhHHHHHHhhhccCCCCCCcchhHHHHH-HHHHHHHHHHHHHHHHHHhhhhcccccCcchhhhhHHH
Q 018509          214 RLHAITITSATCFLFPVAMWDLIIGSKSSSSVDLPFSAWAF-LSTTLFGIILIFYVDAMAEERLHMVFSSPRHLMVAGGC  292 (355)
Q Consensus       214 RL~Alt~l~stv~L~P~al~~~~~~~~s~~s~~~~~~~w~~-l~~~vF~~VL~fyvesi~~~rl~~~~ss~r~~lV~~~c  292 (355)
                      =-+|+.+++++.+...+.  ....         .....|.- +.-.+++.---+|  -++.++.+...+.+..-+-..+.
T Consensus       169 lPqaiGm~i~a~i~~~~~--~~~~---------~~k~~~~nil~G~~w~ignl~~--~is~~~~G~a~af~lSQ~~vvIS  235 (269)
T PF06800_consen  169 LPQAIGMLIGAFIFNLFS--KKPF---------FEKKSWKNILTGLIWGIGNLFY--LISAQKNGVATAFTLSQLGVVIS  235 (269)
T ss_pred             HHHHHHHHHHHHHHhhcc--cccc---------cccchHHhhHHHHHHHHHHHHH--HHhHHhccchhhhhHHhHHHHHH
Confidence            556777777766654433  1110         11222433 4444444433333  23456888888888877777777


Q ss_pred             HHHHHHHhccccch---HHHHHHHHHHhhhh
Q 018509          293 IIVMEMVYKMDFSL---IGFIICSLILGFGI  320 (355)
Q Consensus       293 ~iv~e~~~~~~~sl---~g~lic~~ll~~gv  320 (355)
                      ++---++++|.=+-   ...+++.++++.|.
T Consensus       236 tlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~  266 (269)
T PF06800_consen  236 TLGGIFILKEKKTKKEMIYTLIGLILIVIGA  266 (269)
T ss_pred             HhhhheEEEecCchhhHHHHHHHHHHHHHhh
Confidence            77777788887553   33344445455553

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=89.88  E-value=15  Score=37.01  Aligned_cols=214  Identities=19%  Similarity=0.111  Sum_probs=123.0

Q ss_pred             HHHHHHHHHHHHHHhcccccchhhHHHhhhhhh---HHHHHHHHHhCCCCCcchhhHHHHHHHHHHHHhhcccccccccC
Q 018509           87 INGGITALYFILWGKGLKSCGPVRALLAEYSGA---VLGVLSAVLYGRRGHVWKKVGGLIAILASFYFLSQGWATETSSP  163 (355)
Q Consensus        87 ~~gvv~~l~~lLwf~gL~~cGplrsiL~e~s~~---Vl~~Ls~lf~g~~~~~~k~rG~~l~~igvl~lLs~gw~~~~~~p  163 (355)
                      -.++.-..=..+.+.||-++.+-  +---.-|+   -.+++|+-|+++..+++|-.|....++|.+..-           
T Consensus        91 ~Pal~Di~gsslm~vgL~lTsAS--sfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg-----------  157 (372)
T KOG3912|consen   91 PPALCDIAGSSLMYVGLNLTSAS--SFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVG-----------  157 (372)
T ss_pred             ChHHHHHhhhHHHHHHHHHhhHH--HHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheee-----------
Confidence            35666667777888888887542  22111222   678999999999999999999999999887764           


Q ss_pred             CccCC---cchHhhhhhhhhccchhHHHHHHHHHHHHHHHHhhhhhhhcc-cchhHHHHHHHHHHHHHhHHHHHHhhhcc
Q 018509          164 FSFKD---SLDAELRTEQVLGMKEMVVPLLAGILSALRRVIARRVSLKIT-LKRRLHAITITSATCFLFPVAMWDLIIGS  239 (355)
Q Consensus       164 f~lfd---~d~~~~~~~~~lG~~Dv~Lli~a~~l~a~~~~~sRr~s~~~g-g~kRL~Alt~l~stv~L~P~al~~~~~~~  239 (355)
                        .-|   .+|+..+-.+.+ .+|. +.++|=+.-+.--+.-.|.-.+.+ .|-+.-++--+++.+++.-.++--+....
T Consensus       158 --~~d~~~~~~p~~d~s~ii-tGdl-lIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~  233 (372)
T KOG3912|consen  158 --SLDVHLVTDPYTDYSSII-TGDL-LIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPS  233 (372)
T ss_pred             --eeecccccCCccccccch-hhhH-HHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheec
Confidence              222   222222222233 5666 566666666666666655555554 88899999889998877766665444332


Q ss_pred             CCCCC------CcchhHHHH-----H-HHHHHHHHHHH--HH-HHHHHhhhhcc-----cccCcchhhhhHHHHHHHHHH
Q 018509          240 KSSSS------VDLPFSAWA-----F-LSTTLFGIILI--FY-VDAMAEERLHM-----VFSSPRHLMVAGGCIIVMEMV  299 (355)
Q Consensus       240 ~s~~s------~~~~~~~w~-----~-l~~~vF~~VL~--fy-vesi~~~rl~~-----~~ss~r~~lV~~~c~iv~e~~  299 (355)
                      ..+-+      -..|...|.     + ++++..+.+.+  || +--+.+.|...     .-++.|-+.+=.+.+    -.
T Consensus       234 ~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si----~m  309 (372)
T KOG3912|consen  234 GDSFSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSI----AM  309 (372)
T ss_pred             CCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHH----HH
Confidence            21111      113455552     2 44444443322  11 11111222221     223444333322222    23


Q ss_pred             hccccchHHHHHHHHHHhhhhhc
Q 018509          300 YKMDFSLIGFIICSLILGFGIYE  322 (355)
Q Consensus       300 ~~~~~sl~g~lic~~ll~~gv~~  322 (355)
                      --|.|.+.| +.|=++++.|+..
T Consensus       310 ~~E~f~llq-ilGFliLi~Gi~l  331 (372)
T KOG3912|consen  310 GWEYFHLLQ-ILGFLILIMGIIL  331 (372)
T ss_pred             HHHHHHHHH-HHHHHHHHHHHHH
Confidence            457788888 7788888888763

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=89.50  E-value=27  Score=35.67  Aligned_cols=246  Identities=13%  Similarity=0.148  Sum_probs=131.1

Q ss_pred             CchhhHHHHHHHHHHHHHHHHhcC-----CCCCCCCccc------chhhHHHHHHHHHHHHHHHHhcccccchhhHHH-h
Q 018509           47 GVSVILFIFCCLVPSSILFLLLQK-----PWKGRPLLNT------QMVPSVINGGITALYFILWGKGLKSCGPVRALL-A  114 (355)
Q Consensus        47 p~~lv~f~Fl~~l~ss~~~l~~qk-----P~~g~~l~~~------Qw~~il~~gvv~~l~~lLwf~gL~~cGplrsiL-~  114 (355)
                      |.+.+...=+.|++..+.+++.|+     ++ .+.+++.      .-.++.+.+++-++=|-+-+.++.+--|..-.. .
T Consensus        47 ~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~lk~~vPa~iYalqNnl~yval~~ldaatyqVt~  125 (345)
T KOG2234|consen   47 PTTAVFLTEVIKLVFCLFLLLFEERKYAKKS-LKSLSKEILAAPRETLKVSVPALIYALQNNLQYVALSNLDAATYQVTY  125 (345)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhHHhhhh-hhhcCHHHHhChHHHHHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhh
Confidence            357777788889999888998883     33 4555542      234556666666665667777777776553333 3


Q ss_pred             hhhhhHHHHHHHHHhCCCCCcchhhHHHHHHHHHHHHhhcccccccccCCccCCcchHh-hhhhh--hhccchhHHHHHH
Q 018509          115 EYSGAVLGVLSAVLYGRRGHVWKKVGGLIAILASFYFLSQGWATETSSPFSFKDSLDAE-LRTEQ--VLGMKEMVVPLLA  191 (355)
Q Consensus       115 e~s~~Vl~~Ls~lf~g~~~~~~k~rG~~l~~igvl~lLs~gw~~~~~~pf~lfd~d~~~-~~~~~--~lG~~Dv~Lli~a  191 (355)
                      ...=.=+++++.++++++.+..| .+.+..+.+..+++        |.|  .-|+.+.. +..++  ++|..   ..+.+
T Consensus       126 qlKI~tTA~f~vl~L~rkLs~~Q-w~Al~lL~~Gv~~v--------Q~~--~~~~~~a~~~~~~~n~~~G~~---avl~~  191 (345)
T KOG2234|consen  126 QLKILTTAIFSVLILRRKLSRLQ-WMALVLLFAGVALV--------QLP--SLSPTGAKSESSAQNPFLGLV---AVLVA  191 (345)
T ss_pred             hHHHHHHHHHHHHHHhhhhhHHH-HHHHHHHHHHHHHH--------hcc--CCCCCCccCCCcccchhhhHH---HHHHH
Confidence            33333677889999999999888 55555555555554        122  12333322 22233  44443   34444


Q ss_pred             HHHHHHHHHHhhhhhhhcccc-----hhHHHHHHHHHHHHHhHHHHHHhhhccCCCCCCc----ch-hHHHHH-HHHHHH
Q 018509          192 GILSALRRVIARRVSLKITLK-----RRLHAITITSATCFLFPVAMWDLIIGSKSSSSVD----LP-FSAWAF-LSTTLF  260 (355)
Q Consensus       192 ~~l~a~~~~~sRr~s~~~gg~-----kRL~Alt~l~stv~L~P~al~~~~~~~~s~~s~~----~~-~~~w~~-l~~~vF  260 (355)
                      -+++..-.+..-|..++....     -++.-++        .+++.......+.+.....    .| ...|.. +.-++-
T Consensus       192 c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g--------~~f~~l~~~~~d~~~i~~~gff~G~s~~vw~vVl~~a~g  263 (345)
T KOG2234|consen  192 CFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFG--------ILFNLLTILLQDGEAINEYGFFYGYSSIVWLVVLLNAVG  263 (345)
T ss_pred             HHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH--------HHHHHHHHhhccccccccCCccccccHHHHHHHHHHhcc
Confidence            455555555555555433211     1222222        2333333333322222101    11 222655 666655


Q ss_pred             HHHHH---HHHHHHHhhhhcccccCcchhhhhHHHHHHHHHHhccccchHHHHHHHHHHhhhhhccc
Q 018509          261 GIILI---FYVDAMAEERLHMVFSSPRHLMVAGGCIIVMEMVYKMDFSLIGFIICSLILGFGIYEAT  324 (355)
Q Consensus       261 ~~VL~---fyvesi~~~rl~~~~ss~r~~lV~~~c~iv~e~~~~~~~sl~g~lic~~ll~~gv~~~t  324 (355)
                      |...+   =|.|||-..=    .+|    +-.+++++.+..+.+-.+|+ .|+++..+++.+++.-.
T Consensus       264 GLlvs~v~KyADnIlK~f----~~s----~aiilt~v~S~~Lf~~~~t~-~F~lG~~lVi~Si~lY~  321 (345)
T KOG2234|consen  264 GLLVSLVMKYADNILKGF----STS----VAIILTTVASIALFDFQLTL-YFLLGALLVILSIFLYS  321 (345)
T ss_pred             chhHHHHHHHhHHHHHHH----HHH----HHHHHHHHHHHHHccCCchH-HHHHHHHHHHHHHHHhh
Confidence            54443   3566654321    111    33355555553344444444 57999999999998544

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=89.05  E-value=2.5  Score=36.61  Aligned_cols=70  Identities=16%  Similarity=0.052  Sum_probs=55.1

Q ss_pred             HHHHHHHHHHHHHHHHhhhhcccccCcchh-hhhHHHHHHHHHHhccccchHHHHHHHHHHhhhhhcccccC
Q 018509          257 TTLFGIILIFYVDAMAEERLHMVFSSPRHL-MVAGGCIIVMEMVYKMDFSLIGFIICSLILGFGIYEATSLD  327 (355)
Q Consensus       257 ~~vF~~VL~fyvesi~~~rl~~~~ss~r~~-lV~~~c~iv~e~~~~~~~sl~g~lic~~ll~~gv~~~t~~~  327 (355)
                      ..+....++||..+.+-++++...+=+-+- .=....+++..++++|++|+.+ .+|-.+++.||-.....+
T Consensus        35 ~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~-~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         35 LMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMK-IAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH-HHHHHHHHHHHHHhhcCC
Confidence            356677889999999999998877766543 4446667777789999999999 999999999987654433

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=88.70  E-value=4.2  Score=35.63  Aligned_cols=103  Identities=11%  Similarity=0.051  Sum_probs=77.2

Q ss_pred             CCchhhHHHHHHHHHHHHHHHHhcCCCCCCCCcccchhhHHHHHHHHHHHHHHHHhcccccchhhHHHhhhhhh-HHHHH
Q 018509           46 TGVSVILFIFCCLVPSSILFLLLQKPWKGRPLLNTQMVPSVINGGITALYFILWGKGLKSCGPVRALLAEYSGA-VLGVL  124 (355)
Q Consensus        46 ~p~~lv~f~Fl~~l~ss~~~l~~qkP~~g~~l~~~Qw~~il~~gvv~~l~~lLwf~gL~~cGplrsiL~e~s~~-Vl~~L  124 (355)
                      +|..-+.+.|...+..++++..+.++.+.+.+++..|...+ -|++|+.+..+-......-|+.++...-..+- +.+++
T Consensus        29 s~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~~l-GG~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~  107 (138)
T PF04657_consen   29 SPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWAYL-GGLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLL  107 (138)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHHhc-cHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Confidence            35677778888888888888877776556667777777777 69999999999999999999998888444444 44444


Q ss_pred             HHHH-----hCCCCCcchhhHHHHHHHHHH
Q 018509          125 SAVL-----YGRRGHVWKKVGGLIAILASF  149 (355)
Q Consensus       125 s~lf-----~g~~~~~~k~rG~~l~~igvl  149 (355)
                      -=-|     .+++.+++|..|..+.+.|++
T Consensus       108 iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~  137 (138)
T PF04657_consen  108 IDHFGLFGAPKRPFSLRRILGLALMIAGVI  137 (138)
T ss_pred             HHHccccCCCCCCCCHHHHHHHHHHHHHHh
Confidence            2222     456677789999999998875

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=88.46  E-value=2.2  Score=37.13  Aligned_cols=68  Identities=19%  Similarity=0.165  Sum_probs=49.2

Q ss_pred             HHHHHHHHH-HHHHHHHhcccccchhhHHH-hhhhhhHHHHHHH--HHhCCCCCcchhhHHHHHHHHHHHHh
Q 018509           85 SVINGGITA-LYFILWGKGLKSCGPVRALL-AEYSGAVLGVLSA--VLYGRRGHVWKKVGGLIAILASFYFL  152 (355)
Q Consensus        85 il~~gvv~~-l~~lLwf~gL~~cGplrsiL-~e~s~~Vl~~Ls~--lf~g~~~~~~k~rG~~l~~igvl~lL  152 (355)
                      .+..|++.. +-..+|..+++.-++-.+-= ...++.....++.  ++++|+.+..|..|+.+.+.|++++-
T Consensus        50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~  121 (129)
T PRK02971         50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLIN  121 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            455666666 88889999999864443333 4445444444444  38999999999999999999998874

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=87.85  E-value=2.8  Score=35.65  Aligned_cols=69  Identities=10%  Similarity=0.004  Sum_probs=54.3

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhcccccCcchh-hhhHHHHHHHHHHhccccchHHHHHHHHHHhhhhhcccc
Q 018509          256 STTLFGIILIFYVDAMAEERLHMVFSSPRHL-MVAGGCIIVMEMVYKMDFSLIGFIICSLILGFGIYEATS  325 (355)
Q Consensus       256 ~~~vF~~VL~fyvesi~~~rl~~~~ss~r~~-lV~~~c~iv~e~~~~~~~sl~g~lic~~ll~~gv~~~t~  325 (355)
                      ...+....+.||.-+.+-++++...+=.-+- +=....+++.-++++|++|+.+ ++|-.+++.||-...-
T Consensus        34 i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~-~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPA-IIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH-HHHHHHHHHHHHHHhc
Confidence            3456778899999999999988866544433 3345667777789999999999 9999999999886543

>TIGR00803 nst UDP-galactose transporter

Probab=86.18  E-value=11  Score=34.63  Aligned_cols=37  Identities=3%  Similarity=-0.015  Sum_probs=30.4

Q ss_pred             hhhhhHHHHHHHHHHhccccchHHHHHHHHHHhhhhhc
Q 018509          285 HLMVAGGCIIVMEMVYKMDFSLIGFIICSLILGFGIYE  322 (355)
Q Consensus       285 ~~lV~~~c~iv~e~~~~~~~sl~g~lic~~ll~~gv~~  322 (355)
                      ...-+++++++...++++.+|..+ .+++.++..|++.
T Consensus       185 ~~~~~~~s~lls~~~f~~~ls~~~-~~g~~lV~~~~~l  221 (222)
T TIGR00803       185 TALSIILSTLASVRLFDAKISSTF-YLGAILVFLATFL  221 (222)
T ss_pred             HHHHHHHHHHHHHHHhcCCccHHH-HHHHHHHHeeeEe
Confidence            334457888888889999999999 8999999988763

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PRK11431 multidrug efflux system protein; Provisional

Probab=83.54  E-value=5  Score=33.91  Aligned_cols=71  Identities=15%  Similarity=0.023  Sum_probs=54.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhcccccCcchh-hhhHHHHHHHHHHhccccchHHHHHHHHHHhhhhhcc
Q 018509          252 WAFLSTTLFGIILIFYVDAMAEERLHMVFSSPRHL-MVAGGCIIVMEMVYKMDFSLIGFIICSLILGFGIYEA  323 (355)
Q Consensus       252 w~~l~~~vF~~VL~fyvesi~~~rl~~~~ss~r~~-lV~~~c~iv~e~~~~~~~sl~g~lic~~ll~~gv~~~  323 (355)
                      |.+....+.+..++||.-+.+-++++...+=.-+- .=+...+++..++++|++|+.+ ++|-.+++.||-..
T Consensus        29 ~~~~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~-~~gi~lIi~GVv~l  100 (105)
T PRK11431         29 LTPSIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPAR-LLSLALIVAGIIGL  100 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH-HHHHHHHHHHHHhh
Confidence            44433446778899999999999988865544333 4446667777789999999999 99999999998654

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=82.62  E-value=5.2  Score=34.11  Aligned_cols=70  Identities=10%  Similarity=0.051  Sum_probs=53.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhcccccCcchhhhh-HHHHHHHHHHhccccchHHHHHHHHHHhhhhhc
Q 018509          252 WAFLSTTLFGIILIFYVDAMAEERLHMVFSSPRHLMVA-GGCIIVMEMVYKMDFSLIGFIICSLILGFGIYE  322 (355)
Q Consensus       252 w~~l~~~vF~~VL~fyvesi~~~rl~~~~ss~r~~lV~-~~c~iv~e~~~~~~~sl~g~lic~~ll~~gv~~  322 (355)
                      |.+....+....++||.=+.+-++++...+=.-+--+- ...+++..++++|++|+.+ ++|-.+++.||-.
T Consensus        35 ~~~~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~-~~gi~lIi~GVi~  105 (109)
T PRK10650         35 KIYGILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKG-WIGLVLLLAGMVM  105 (109)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHH-HHHHHHHHHHHHH
Confidence            44444446778899999999999998876655544443 5556666668999999999 9999999999864

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=81.85  E-value=9.7  Score=30.95  Aligned_cols=57  Identities=18%  Similarity=0.146  Sum_probs=30.3

Q ss_pred             HHHHHHHHHHHHHHHHhhhhcccccCcch-hhhhHHHHHHHHHHhccccchHHHHHHHH
Q 018509          257 TTLFGIILIFYVDAMAEERLHMVFSSPRH-LMVAGGCIIVMEMVYKMDFSLIGFIICSL  314 (355)
Q Consensus       257 ~~vF~~VL~fyvesi~~~rl~~~~ss~r~-~lV~~~c~iv~e~~~~~~~sl~g~lic~~  314 (355)
                      ..+....++||..+.+-+|++.+.+-+-+ -+-+...+++...+++|++|+.+ .+|-.
T Consensus        34 ~~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~-~~gi~   91 (93)
T PF00893_consen   34 LAVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSK-WLGIG   91 (93)
T ss_dssp             HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH---------HHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH-Hhhee
Confidence            34557889999999999999988775544 35567778888889999999999 55433

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	355
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	97.5
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	95.86
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	94.05
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	93.21

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=97.50  E-value=8.3e-05  Score=64.03  Aligned_cols=89  Identities=11%  Similarity=0.030  Sum_probs=52.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhcccccCcc-hhhhhHHHHHHHHHHhccccchHHHHHHHHHHhhhhhcccccCCCC----
Q 018509          256 STTLFGIILIFYVDAMAEERLHMVFSSPR-HLMVAGGCIIVMEMVYKMDFSLIGFIICSLILGFGIYEATSLDHGR----  330 (355)
Q Consensus       256 ~~~vF~~VL~fyvesi~~~rl~~~~ss~r-~~lV~~~c~iv~e~~~~~~~sl~g~lic~~ll~~gv~~~t~~~~~~----  330 (355)
                      ...++..++.||..+.+-++++.+++.+. ..+.|.+++++..++++|++|+.+ ++|.++++.||......+++.    
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~-~~Gi~LIi~GV~ll~~~~~~~~~~~  112 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPA-IIGMMLICAGVLIINLLSRSTPHEF  112 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------C-HHHHHHHHHHHHHHHHC--------
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH-HHHHHHHHHHHHHHhcCCCCCCCCc
Confidence            45677889999999999999999999998 799999999999999999999999 999999999999765433222    


Q ss_pred             CCCCCCCCCCCCccc
Q 018509          331 KDTFQKPDLSNGMLG  345 (355)
Q Consensus       331 ~~~~~~~~~s~~~~~  345 (355)
                      +..-+..|+||..+.
T Consensus       113 ~~~v~~~~~~~~~~~  127 (137)
T 2i68_A          113 EAYVEQKLISEEDLN  127 (137)
T ss_dssp             ---------------
T ss_pred             ccchhhhhcCHHHhh
Confidence            123355667765543

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=95.86  E-value=0.025  Score=46.20  Aligned_cols=69  Identities=10%  Similarity=-0.008  Sum_probs=61.9

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhcccccCcc-hhhhhHHHHHHHHHHhccccchHHHHHHHHHHhhhhhcccc
Q 018509          256 STTLFGIILIFYVDAMAEERLHMVFSSPR-HLMVAGGCIIVMEMVYKMDFSLIGFIICSLILGFGIYEATS  325 (355)
Q Consensus       256 ~~~vF~~VL~fyvesi~~~rl~~~~ss~r-~~lV~~~c~iv~e~~~~~~~sl~g~lic~~ll~~gv~~~t~  325 (355)
                      ...++...+.||..+.+-++++.+.+.+- -..-|.+.+++..++++|++|..+ ++|..+++.||.....
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~-~~Gi~lIi~Gv~~l~~  103 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPA-IIGMMLICAGVLIINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHH-HHHHHHHHHHHHHHhc
Confidence            35566788999999999999999999887 588999999999999999999999 9999999999997754

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=94.05  E-value=0.12  Score=44.25  Aligned_cols=65  Identities=15%  Similarity=0.084  Sum_probs=43.9

Q ss_pred             HHHHHH-HHHHHHHhcccccchhhHHH--hhhhhhHHHHHHHHHhCCCCCcchhhHHHHHHHHHHHHh
Q 018509           88 NGGITA-LYFILWGKGLKSCGPVRALL--AEYSGAVLGVLSAVLYGRRGHVWKKVGGLIAILASFYFL  152 (355)
Q Consensus        88 ~gvv~~-l~~lLwf~gL~~cGplrsiL--~e~s~~Vl~~Ls~lf~g~~~~~~k~rG~~l~~igvl~lL  152 (355)
                      .+++.. +...+|..++|..++-.+.-  ....|++..+++.++++|+.++.|..|+.+.+.|++.+-
T Consensus        35 l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~  102 (137)
T 2i68_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIIN  102 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            344444 88999999999976665544  466777888889999999999999999999999999885

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=93.21  E-value=0.37  Score=39.18  Aligned_cols=64  Identities=16%  Similarity=0.137  Sum_probs=52.1

Q ss_pred             HHHHH-HHHHHHHHhcccccchhhHHH---hhhhhhHHHHHHHHHhCCCCCcchhhHHHHHHHHHHHHh
Q 018509           88 NGGIT-ALYFILWGKGLKSCGPVRALL---AEYSGAVLGVLSAVLYGRRGHVWKKVGGLIAILASFYFL  152 (355)
Q Consensus        88 ~gvv~-~l~~lLwf~gL~~cGplrsiL---~e~s~~Vl~~Ls~lf~g~~~~~~k~rG~~l~~igvl~lL  152 (355)
                      .+++. ++...+|..++|. .|+...-   ...+++...+++.++++|+.++.|..|..+.+.|++.+-
T Consensus        35 ~~~~~~~~~~~~~~~al~~-~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~  102 (110)
T 3b5d_A           35 GTIICYCASFWLLAQTLAY-IPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIIN  102 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHh-CChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            44444 4888999999997 6775543   466777888889999999999999999999999998884

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00