Citrus Sinensis ID: 018528

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350----
MAARVILWALSKRPRCFHRPSISRSISTLVLGEHENGSIKSQSLSAVEAAKSLSDDNSVSMLLAGSGPSFNEAVKHAASSHPSISQVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDVIEISGSSQFVRPIYAGNALCTVRYTGANPCMLTVRATSFPMPKSSAESRSNGASISQVDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKFPEKK
cHHHHHHHHHHccccccccccHHccccEEEEEEEccccccHHHHHHHHHHHHccccccEEEEEEcccccHHHHHHHHHHccccccEEEEEEcccccccccHHHHHHHHHHHHHccccEEEEccccccccHHHHHHHHHcccccccEEEEEcccEEEccccccEEEEEEEEcccccEEEEEcccccccccccccccccccEEEEEEcccccccccccEEEEEEEcccccccccccccEEEEccccccccccccccHHHHHHHccHHHHHHHHHHccccccccccccccccccccEEEEEHHHHHHHHHHccccccEEEEEcccccccccccccEEEHHHHHHHHHHHHHcccccc
ccHHHHHHHHcccccccccccHHHHccEEEEEEEccccEccHHHHHHHHHHHHHHHcccEEEEEEEcccHHHHHHHHHHHHccccEEEEEEcHHHccccHHHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHHHHHccccEEEEcEEEEccEEEEEEccccEEEEEEcccccccEEEEcccccccccccccccccEEEEEEEEccccccccEEEEEEEEEEEcccccccHHHccEEEEEcHHHcccHHHHHHHHHHHHHccEEEEcHHHHHcccccHHHEEccccEcccccEEEEEcccccHHHHcccccccEEEEEEcccccHHHHcccEEEEccHHHHHHHHHHHHHHcc
MAARVILWALskrprcfhrpsisrsISTLVlgehengsiksqSLSAVEAAKSlsddnsvsmllagsgpsfnEAVKHaasshpsisqvlvadsdkfaypiaePWAKLVHMIQQREKYSHIISasgsfgknvLPRAAalldvspitdvieisgssqfvrpiyagnalctvrytganpcmltvratsfpmpkssaesrsngasisqvdlsaldedsigksryvkhtsqdaerpdlgsarivvtggrglksaENFKMIEKLAEKLGAAVGATRAVvdagfvpndlqvgqtgkivapeLYMAFGVSGAIQHLAGMRDSKVIVAVnkdadapifqvadyglvgDLFEVIPELLEKFPEKK
MAARVILWAlskrprcfhrpsiSRSISTLVLGEHENGSIKSQSLSAVEAAKSLSDDNSVSMLLAGSGPSFNEAVKHAASSHPSISQVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDVIEisgssqfvrPIYAGNALCTVRYTGANPCMLTVRATSFPmpkssaesrsngasisqVDLSALDEDSIGKSRYVkhtsqdaerpdlgsaRIVVTggrglksaeNFKMIEKLAEKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKFPEKK
MAARVILWALSKRPRCFHRPSISRSISTLVLGEHENGSIKSQSLSAVEAAKSLSDDNSVSMLLAGSGPSFNEAVKHAASSHPSISQVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDVIEISGSSQFVRPIYAGNALCTVRYTGANPCMLTVRATSFPMPKSSAESRSNGASISQVDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKFPEKK
***RVILWALSKRPRCFHRPSISRSISTLV*******************************************************QVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDVIEISGSSQFVRPIYAGNALCTVRYTGANPCMLTVRA*****************************************************RIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELL*******
*********************ISRSISTLVLGEHENGSIKSQSLSAVEAAKSLSDDNSVSMLLAGSGPSFNEAVKHAASSHPSISQVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDVIEISGSSQFVRPIYAGNALCTVRYTGANPCMLTVRATSFP*****************VDLSALDEDSIGKS*************DLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKFP***
MAARVILWALSKRPRCFHRPSISRSISTLVLGEHENGSIKSQSLSAVEAAKSLSDDNSVSMLLAGSGPSFNE***********ISQVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDVIEISGSSQFVRPIYAGNALCTVRYTGANPCMLTVRATSF***************ISQVDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKFPEKK
*****************HRPSISRSISTLVLGEHENGSIKSQSLSAVEAAKSLSDDNSVSMLLAGSGPSFNEAVKHAASSHPSISQVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDVIEISGSSQFVRPIYAGNALCTVRYTGANPCMLTVRATSFPMPKSSAESRSNGASISQVDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKFPEK*
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SSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAARVILWALSKRPRCFHRPSISRSISTLVLGEHENGSIKSQSLSAVEAAKSLSDDNSVSMLLAGSGPSFNEAVKHAASSHPSISQVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDVIEISGSSQFVRPIYAGNALCTVRYTGANPCMLTVRATSFPMPKSSAESRSNGASISQVDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKFPEKK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query354 2.2.26 [Sep-21-2011]
Q9C6I6363 Electron transfer flavopr yes no 1.0 0.975 0.707 1e-148
Q75LJ3358 Electron transfer flavopr yes no 0.951 0.941 0.697 1e-125
A2XNR6358 Electron transfer flavopr N/A no 0.951 0.941 0.697 1e-125
Q8HXY0333 Electron transfer flavopr N/A no 0.887 0.942 0.493 1e-79
P13804333 Electron transfer flavopr yes no 0.895 0.951 0.492 2e-79
Q99LC5333 Electron transfer flavopr yes no 0.901 0.957 0.489 2e-78
Q5RC31333 Electron transfer flavopr yes no 0.895 0.951 0.486 4e-78
P13803333 Electron transfer flavopr yes no 0.901 0.957 0.486 3e-77
Q2KJE4333 Electron transfer flavopr yes no 0.901 0.957 0.480 5e-77
Q54FD7355 Electron transfer flavopr yes no 0.895 0.892 0.469 4e-76
>sp|Q9C6I6|ETFA_ARATH Electron transfer flavoprotein subunit alpha, mitochondrial OS=Arabidopsis thaliana GN=ETFA PE=1 SV=1 Back     alignment and function desciption
 Score =  525 bits (1353), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 257/363 (70%), Positives = 299/363 (82%), Gaps = 9/363 (2%)

Query: 1   MAARVILWALSK---------RPRCFHRPSISRSISTLVLGEHENGSIKSQSLSAVEAAK 51
           M   V+L AL+K         R       S+SR ISTL+L EHE+G+IK Q++S V AA 
Sbjct: 1   MTRTVLLRALTKNKFVASNAPRSISISITSLSRCISTLILAEHESGTIKPQTVSTVVAAN 60

Query: 52  SLSDDNSVSMLLAGSGPSFNEAVKHAASSHPSISQVLVADSDKFAYPIAEPWAKLVHMIQ 111
           SL + +S+S+LLAGSG S  EA   AAS HPS+S+VLVADSDKF Y +AEPWAKLV  ++
Sbjct: 61  SLGESSSISLLLAGSGSSLQEAASQAASCHPSVSEVLVADSDKFEYSLAEPWAKLVDFVR 120

Query: 112 QREKYSHIISASGSFGKNVLPRAAALLDVSPITDVIEISGSSQFVRPIYAGNALCTVRYT 171
           Q+  YSHI+++S SFGKN+LPR AALLDVSPITDV++I GS QF+RPIYAGNALCTVRYT
Sbjct: 121 QQGDYSHILASSSSFGKNILPRVAALLDVSPITDVVKILGSDQFIRPIYAGNALCTVRYT 180

Query: 172 GANPCMLTVRATSFPMPKSSAESRSNGASISQVDLSALDEDSIGKSRYVKHTSQDAERPD 231
           GA PCMLT+R+TSFP+   +A S S  A++SQ+DLS  ++DS+ KSRYV  ++QD ERPD
Sbjct: 181 GAGPCMLTIRSTSFPVTPITANSESKKATVSQIDLSNFEDDSVSKSRYVGRSTQDTERPD 240

Query: 232 LGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVA 291
           LGSAR+V+TGGR LKS ENFKMIEKLAEKLG AVGATRA VDAG+VPNDLQVGQTGKIVA
Sbjct: 241 LGSARVVITGGRALKSVENFKMIEKLAEKLGGAVGATRAAVDAGYVPNDLQVGQTGKIVA 300

Query: 292 PELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKFP 351
           PELYMAFGVSGAIQHLAG++DSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEK P
Sbjct: 301 PELYMAFGVSGAIQHLAGIKDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKLP 360

Query: 352 EKK 354
           EKK
Sbjct: 361 EKK 363
The electron transfer flavoprotein serves as a specific electron acceptor for several dehydrogenases, including five acyl-CoA dehydrogenases, glutaryl-CoA and sarcosine dehydrogenase. It transfers the electrons to the main mitochondrial respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase). Involved in leucine catabolism and in phytol degradation.
Arabidopsis thaliana (taxid: 3702)
>sp|Q75LJ3|ETFA_ORYSJ Electron transfer flavoprotein subunit alpha, mitochondrial OS=Oryza sativa subsp. japonica GN=ETFA PE=3 SV=1 Back     alignment and function description
>sp|A2XNR6|ETFA_ORYSI Electron transfer flavoprotein subunit alpha, mitochondrial OS=Oryza sativa subsp. indica GN=ETFA PE=3 SV=1 Back     alignment and function description
>sp|Q8HXY0|ETFA_MACFA Electron transfer flavoprotein subunit alpha, mitochondrial OS=Macaca fascicularis GN=ETFA PE=2 SV=1 Back     alignment and function description
>sp|P13804|ETFA_HUMAN Electron transfer flavoprotein subunit alpha, mitochondrial OS=Homo sapiens GN=ETFA PE=1 SV=1 Back     alignment and function description
>sp|Q99LC5|ETFA_MOUSE Electron transfer flavoprotein subunit alpha, mitochondrial OS=Mus musculus GN=Etfa PE=1 SV=2 Back     alignment and function description
>sp|Q5RC31|ETFA_PONAB Electron transfer flavoprotein subunit alpha, mitochondrial OS=Pongo abelii GN=ETFA PE=2 SV=1 Back     alignment and function description
>sp|P13803|ETFA_RAT Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus GN=Etfa PE=1 SV=4 Back     alignment and function description
>sp|Q2KJE4|ETFA_BOVIN Electron transfer flavoprotein subunit alpha, mitochondrial OS=Bos taurus GN=ETFA PE=2 SV=1 Back     alignment and function description
>sp|Q54FD7|ETFA_DICDI Electron transfer flavoprotein subunit alpha, mitochondrial OS=Dictyostelium discoideum GN=etfa PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query354
255563727352 electron transport oxidoreductase, putat 0.963 0.968 0.785 1e-158
225461066361 PREDICTED: electron transfer flavoprotei 0.940 0.922 0.819 1e-157
224115256327 predicted protein [Populus trichocarpa] 0.923 1.0 0.802 1e-154
356517292357 PREDICTED: electron transfer flavoprotei 0.997 0.988 0.756 1e-150
388502082360 unknown [Lotus japonicus] 0.994 0.977 0.751 1e-149
297852806365 etfalpha [Arabidopsis lyrata subsp. lyra 1.0 0.969 0.715 1e-149
449467427362 PREDICTED: electron transfer flavoprotei 0.935 0.914 0.797 1e-149
357474733357 Electron transfer flavoprotein subunit a 0.997 0.988 0.748 1e-149
217072292357 unknown [Medicago truncatula] gi|3885113 0.997 0.988 0.745 1e-148
15223680363 Electron transfer flavoprotein subunit a 1.0 0.975 0.707 1e-146
>gi|255563727|ref|XP_002522865.1| electron transport oxidoreductase, putative [Ricinus communis] gi|223537949|gb|EEF39563.1| electron transport oxidoreductase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  564 bits (1454), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 268/341 (78%), Positives = 310/341 (90%)

Query: 14  PRCFHRPSISRSISTLVLGEHENGSIKSQSLSAVEAAKSLSDDNSVSMLLAGSGPSFNEA 73
           PR     +  RSISTLV+ EHE G++KSQS++A+EAAKSLS++NS+S+LLAGSGPS  +A
Sbjct: 12  PRLSSLITTFRSISTLVIAEHEGGAVKSQSINAIEAAKSLSNENSISVLLAGSGPSLQQA 71

Query: 74  VKHAASSHPSISQVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPR 133
            ++AA+SHPSISQVLVADSDKF + +AE W+KLV+++QQ+  YSHII+A+ SFGKN+LPR
Sbjct: 72  AQNAATSHPSISQVLVADSDKFTHGLAESWSKLVNLVQQKGGYSHIITAANSFGKNLLPR 131

Query: 134 AAALLDVSPITDVIEISGSSQFVRPIYAGNALCTVRYTGANPCMLTVRATSFPMPKSSAE 193
           AAALL+VSPITDVI+IS S+QF+RPIYAGNALCTV+YTG +PCMLT+R+TSFP+P+ S  
Sbjct: 132 AAALLNVSPITDVIDISSSTQFIRPIYAGNALCTVKYTGTDPCMLTIRSTSFPVPEVSVN 191

Query: 194 SRSNGASISQVDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKM 253
           S SN A ISQVDLS+ DEDSIGKSRYV+ TSQD ERPDLGSARIV+TGGRGLKSAENFKM
Sbjct: 192 SNSNEAPISQVDLSSFDEDSIGKSRYVQCTSQDTERPDLGSARIVITGGRGLKSAENFKM 251

Query: 254 IEKLAEKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDS 313
           IEKLAEKLGAAVGATRA VDAGFVPNDLQVGQTGKIVAPELY+AFGVSGAIQH+AGMRDS
Sbjct: 252 IEKLAEKLGAAVGATRAAVDAGFVPNDLQVGQTGKIVAPELYLAFGVSGAIQHIAGMRDS 311

Query: 314 KVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKFPEKK 354
           +VIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEK PEK+
Sbjct: 312 RVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKLPEKR 352

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225461066|ref|XP_002281637.1| PREDICTED: electron transfer flavoprotein subunit alpha, mitochondrial [Vitis vinifera] gi|297735970|emb|CBI23944.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224115256|ref|XP_002316984.1| predicted protein [Populus trichocarpa] gi|222860049|gb|EEE97596.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356517292|ref|XP_003527322.1| PREDICTED: electron transfer flavoprotein subunit alpha, mitochondrial-like [Glycine max] Back     alignment and taxonomy information
>gi|388502082|gb|AFK39107.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|297852806|ref|XP_002894284.1| etfalpha [Arabidopsis lyrata subsp. lyrata] gi|297340126|gb|EFH70543.1| etfalpha [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|449467427|ref|XP_004151424.1| PREDICTED: electron transfer flavoprotein subunit alpha, mitochondrial-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|357474733|ref|XP_003607652.1| Electron transfer flavoprotein subunit alpha [Medicago truncatula] gi|355508707|gb|AES89849.1| Electron transfer flavoprotein subunit alpha [Medicago truncatula] Back     alignment and taxonomy information
>gi|217072292|gb|ACJ84506.1| unknown [Medicago truncatula] gi|388511341|gb|AFK43732.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|15223680|ref|NP_175507.1| Electron transfer flavoprotein subunit alpha [Arabidopsis thaliana] gi|75268200|sp|Q9C6I6.1|ETFA_ARATH RecName: Full=Electron transfer flavoprotein subunit alpha, mitochondrial; Short=Alpha-ETF; Flags: Precursor gi|12321799|gb|AAG50941.1|AC079284_16 electron transport flavoprotein, putative [Arabidopsis thaliana] gi|26450117|dbj|BAC42178.1| unknown protein [Arabidopsis thaliana] gi|28827356|gb|AAO50522.1| putative electron transport flavoprotein [Arabidopsis thaliana] gi|332194482|gb|AEE32603.1| Electron transfer flavoprotein subunit alpha [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query354
TAIR|locus:2036467363 ETFALPHA "electron transfer fl 0.943 0.920 0.748 1e-132
UNIPROTKB|E1BZW5323 ETFA "Uncharacterized protein" 0.898 0.984 0.506 5.5e-77
UNIPROTKB|Q48K86309 etfA "Electron transfer flavop 0.867 0.993 0.521 6.3e-76
ZFIN|ZDB-GENE-030131-4449339 etfa "electron-transfer-flavop 0.881 0.920 0.512 4.5e-75
UNIPROTKB|F1SJX1333 ETFA "Uncharacterized protein" 0.884 0.939 0.504 5.7e-75
UNIPROTKB|F1N9U8346 ETFA "Uncharacterized protein" 0.867 0.887 0.514 7.3e-75
FB|FBgn0010516340 wal "walrus" [Drosophila melan 0.892 0.929 0.5 9.3e-75
UNIPROTKB|Q4KFP3309 etfA "Electron transfer flavop 0.867 0.993 0.515 5.1e-74
MGI|MGI:106092333 Etfa "electron transferring fl 0.901 0.957 0.489 6.5e-74
UNIPROTKB|E2RAE2333 ETFA "Uncharacterized protein" 0.901 0.957 0.486 1.1e-73
TAIR|locus:2036467 ETFALPHA "electron transfer flavoprotein alpha" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1301 (463.0 bits), Expect = 1.0e-132, P = 1.0e-132
 Identities = 250/334 (74%), Positives = 290/334 (86%)

Query:    21 SISRSISTLVLGEHENGSIKSQSLSAVEAAKSLSDDNSVSMLLAGSGPSFNEAVKHAASS 80
             S+SR ISTL+L EHE+G+IK Q++S V AA SL + +S+S+LLAGSG S  EA   AAS 
Sbjct:    30 SLSRCISTLILAEHESGTIKPQTVSTVVAANSLGESSSISLLLAGSGSSLQEAASQAASC 89

Query:    81 HPSISQVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDV 140
             HPS+S+VLVADSDKF Y +AEPWAKLV  ++Q+  YSHI+++S SFGKN+LPR AALLDV
Sbjct:    90 HPSVSEVLVADSDKFEYSLAEPWAKLVDFVRQQGDYSHILASSSSFGKNILPRVAALLDV 149

Query:   141 SPITDVIEISGSSQFVRPIYAGNALCTVRYTGANPCMLTVRATSFPMPKSSAESRSNGAS 200
             SPITDV++I GS QF+RPIYAGNALCTVRYTGA PCMLT+R+TSFP+   +A S S  A+
Sbjct:   150 SPITDVVKILGSDQFIRPIYAGNALCTVRYTGAGPCMLTIRSTSFPVTPITANSESKKAT 209

Query:   201 ISQVDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMIEKLAEK 260
             +SQ+DLS  ++DS+ KSRYV  ++QD ERPDLGSAR+V+TGGR LKS ENFKMIEKLAEK
Sbjct:   210 VSQIDLSNFEDDSVSKSRYVGRSTQDTERPDLGSARVVITGGRALKSVENFKMIEKLAEK 269

Query:   261 LGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVN 320
             LG AVGATRA VDAG+VPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAG++DSKVIVAVN
Sbjct:   270 LGGAVGATRAAVDAGYVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGIKDSKVIVAVN 329

Query:   321 KDADAPIFQVADYGLVGDLFEVIPELLEKFPEKK 354
             KDADAPIFQVADYGLVGDLFEVIPELLEK PEKK
Sbjct:   330 KDADAPIFQVADYGLVGDLFEVIPELLEKLPEKK 363
GO:0005739 "mitochondrion" evidence=ISM;IDA
GO:0009055 "electron carrier activity" evidence=IEA
GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA
GO:0005507 "copper ion binding" evidence=IDA
UNIPROTKB|E1BZW5 ETFA "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q48K86 etfA "Electron transfer flavoprotein, alpha subunit" [Pseudomonas syringae pv. phaseolicola 1448A (taxid:264730)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-4449 etfa "electron-transfer-flavoprotein, alpha polypeptide" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1SJX1 ETFA "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1N9U8 ETFA "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
FB|FBgn0010516 wal "walrus" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|Q4KFP3 etfA "Electron transfer flavoprotein, alpha subunit" [Pseudomonas protegens Pf-5 (taxid:220664)] Back     alignment and assigned GO terms
MGI|MGI:106092 Etfa "electron transferring flavoprotein, alpha polypeptide" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E2RAE2 ETFA "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q75LJ3ETFA_ORYSJNo assigned EC number0.69790.95190.9413yesno
Q99LC5ETFA_MOUSENo assigned EC number0.48940.90110.9579yesno
Q5Y223ETFA_CRYGWNo assigned EC number0.46860.90670.9277yesno
A2XNR6ETFA_ORYSINo assigned EC number0.69790.95190.9413N/Ano
Q9HZP7ETFA_PSEAENo assigned EC number0.49220.86150.9870yesno
O53275ETFA_MYCTUNo assigned EC number0.37920.88130.9811yesno
O85692ETFA_MEGELNo assigned EC number0.32640.87570.9171yesno
P78790ETFA_SCHPONo assigned EC number0.43550.87850.9120yesno
Q9C6I6ETFA_ARATHNo assigned EC number0.70791.00.9752yesno
P52039ETFA_CLOABNo assigned EC number0.34460.87850.9255yesno
Q93615ETFA_CAEELNo assigned EC number0.48330.88410.9427yesno
Q54FD7ETFA_DICDINo assigned EC number0.46900.89540.8929yesno
Q5RC31ETFA_PONABNo assigned EC number0.48650.89540.9519yesno
P0CN60ETFA_CRYNJNo assigned EC number0.46860.90670.9277yesno
P94551ETFA_BACSUNo assigned EC number0.40.87280.9507yesno
P38974ETFA_PARDENo assigned EC number0.52050.72030.8279yesno
P13804ETFA_HUMANNo assigned EC number0.49250.89540.9519yesno
Q2KJE4ETFA_BOVINNo assigned EC number0.48040.90110.9579yesno
P13803ETFA_RATNo assigned EC number0.48640.90110.9579yesno
Q12480ETFA_YEASTNo assigned EC number0.43150.88410.9098yesno
P53573ETFA_BRAJANo assigned EC number0.46890.85870.9681yesno
O33096ETFA_MYCLENo assigned EC number0.36190.88410.9842yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query354
PLN00022356 PLN00022, PLN00022, electron transfer flavoprotein 0.0
COG2025313 COG2025, FixB, Electron transfer flavoprotein, alp 1e-117
cd01715168 cd01715, ETF_alpha, The electron transfer flavopro 8e-49
pfam0076686 pfam00766, ETF_alpha, Electron transfer flavoprote 8e-48
cd01985181 cd01985, ETF, The electron transfer flavoprotein ( 1e-35
pfam01012160 pfam01012, ETF, Electron transfer flavoprotein dom 1e-34
smart00893185 smart00893, ETF, Electron transfer flavoprotein do 1e-30
PRK11916312 PRK11916, PRK11916, electron transfer flavoprotein 7e-29
PRK03363313 PRK03363, fixB, putative electron transfer flavopr 2e-26
>gnl|CDD|215032 PLN00022, PLN00022, electron transfer flavoprotein subunit alpha; Provisional Back     alignment and domain information 
 Score =  562 bits (1451), Expect = 0.0
 Identities = 253/335 (75%), Positives = 288/335 (85%), Gaps = 1/335 (0%)

Query: 21  SISRSISTLVLGEHENGSIKSQSLSAVEAAKSLS-DDNSVSMLLAGSGPSFNEAVKHAAS 79
           S SR ISTLV+ EHE GS+K QSLSAV AAKSL  + + +S+LLAGSGPS  +A  HAAS
Sbjct: 22  SQSRQISTLVVAEHEGGSVKPQSLSAVAAAKSLLGESSPISLLLAGSGPSLQQAASHAAS 81

Query: 80  SHPSISQVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLD 139
           SHPS+S+VLVADSDK  +P+AEPWAKLV + QQ+  YSHI++AS SFGKNVLPRAAALLD
Sbjct: 82  SHPSVSEVLVADSDKLTHPLAEPWAKLVVLAQQKGGYSHILAASTSFGKNVLPRAAALLD 141

Query: 140 VSPITDVIEISGSSQFVRPIYAGNALCTVRYTGANPCMLTVRATSFPMPKSSAESRSNGA 199
           VSPITDV+ I  S+ FVRPIYAGNAL TVRY G+ PCML++R TSFP+  + A S SN A
Sbjct: 142 VSPITDVVRILDSNTFVRPIYAGNALATVRYKGSGPCMLSIRPTSFPVTPALANSESNEA 201

Query: 200 SISQVDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMIEKLAE 259
            ISQVDLS LDEDS+GKSR+V  + QD ERPDLGSA++VVTGGRGLKSAENFKM+EKLA+
Sbjct: 202 PISQVDLSLLDEDSVGKSRWVGLSVQDTERPDLGSAKVVVTGGRGLKSAENFKMLEKLAD 261

Query: 260 KLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAV 319
           KLG AVGA+RA VDAGFVPNDLQVGQTGKIVAPELY+A G+SGAIQHLAGM+DSKVIVA+
Sbjct: 262 KLGGAVGASRAAVDAGFVPNDLQVGQTGKIVAPELYIAVGISGAIQHLAGMKDSKVIVAI 321

Query: 320 NKDADAPIFQVADYGLVGDLFEVIPELLEKFPEKK 354
           NKDADAPIFQVADYGLV DLFE +PELLEK PEKK
Sbjct: 322 NKDADAPIFQVADYGLVADLFEAVPELLEKLPEKK 356

Length = 356
>gnl|CDD|224936 COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|238848 cd01715, ETF_alpha, The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases Back     alignment and domain information
>gnl|CDD|189709 pfam00766, ETF_alpha, Electron transfer flavoprotein FAD-binding domain Back     alignment and domain information
>gnl|CDD|238943 cd01985, ETF, The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases Back     alignment and domain information
>gnl|CDD|216243 pfam01012, ETF, Electron transfer flavoprotein domain Back     alignment and domain information
>gnl|CDD|214890 smart00893, ETF, Electron transfer flavoprotein domain Back     alignment and domain information
>gnl|CDD|183380 PRK11916, PRK11916, electron transfer flavoprotein subunit YdiR; Provisional Back     alignment and domain information
>gnl|CDD|235120 PRK03363, fixB, putative electron transfer flavoprotein FixB; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 354
PLN00022356 electron transfer flavoprotein subunit alpha; Prov 100.0
COG2025313 FixB Electron transfer flavoprotein, alpha subunit 100.0
PRK03363313 fixB putative electron transfer flavoprotein FixB; 100.0
PRK11916312 electron transfer flavoprotein subunit YdiR; Provi 100.0
KOG3954336 consensus Electron transfer flavoprotein, alpha su 100.0
PF0076686 ETF_alpha: Electron transfer flavoprotein FAD-bind 100.0
cd01715168 ETF_alpha The electron transfer flavoprotein (ETF) 100.0
cd01985181 ETF The electron transfer flavoprotein (ETF) serve 99.98
PF01012164 ETF: Electron transfer flavoprotein domain; InterP 99.97
cd01714202 ETF_beta The electron transfer flavoprotein (ETF) 99.92
PRK12342254 hypothetical protein; Provisional 99.79
PRK03359256 putative electron transfer flavoprotein FixA; Revi 99.78
COG2086260 FixA Electron transfer flavoprotein, beta subunit 99.73
KOG3180254 consensus Electron transfer flavoprotein, beta sub 99.17
PRK07979 574 acetolactate synthase 3 catalytic subunit; Validat 97.22
PF00205137 TPP_enzyme_M: Thiamine pyrophosphate enzyme, centr 97.1
TIGR02418 539 acolac_catab acetolactate synthase, catabolic. Ace 97.08
CHL00099 585 ilvB acetohydroxyacid synthase large subunit 97.07
PRK07789 612 acetolactate synthase 1 catalytic subunit; Validat 97.04
PRK08322 547 acetolactate synthase; Reviewed 97.02
PRK06725 570 acetolactate synthase 3 catalytic subunit; Validat 97.01
PRK06112 578 acetolactate synthase catalytic subunit; Validated 97.01
TIGR01504 588 glyox_carbo_lig glyoxylate carboligase. Glyoxylate 97.0
PRK08617 552 acetolactate synthase; Reviewed 96.92
PRK06048 561 acetolactate synthase 3 catalytic subunit; Reviewe 96.87
PRK08527 563 acetolactate synthase 3 catalytic subunit; Validat 96.75
PRK06276 586 acetolactate synthase catalytic subunit; Reviewed 96.73
PRK08979 572 acetolactate synthase 3 catalytic subunit; Validat 96.72
PRK06882 574 acetolactate synthase 3 catalytic subunit; Validat 96.69
PRK11269 591 glyoxylate carboligase; Provisional 96.57
PRK06466 574 acetolactate synthase 3 catalytic subunit; Validat 96.55
PRK06154 565 hypothetical protein; Provisional 96.53
PRK08155 564 acetolactate synthase catalytic subunit; Validated 96.53
PRK07710 571 acetolactate synthase catalytic subunit; Reviewed 96.51
PRK06965 587 acetolactate synthase 3 catalytic subunit; Validat 96.5
PRK07524 535 hypothetical protein; Provisional 96.45
PRK07282 566 acetolactate synthase catalytic subunit; Reviewed 96.38
PRK06456 572 acetolactate synthase catalytic subunit; Reviewed 96.37
PRK06546 578 pyruvate dehydrogenase; Provisional 96.35
PRK07092 530 benzoylformate decarboxylase; Reviewed 96.34
PRK09107 595 acetolactate synthase 3 catalytic subunit; Validat 96.29
PRK05858 542 hypothetical protein; Provisional 96.28
PRK08978 548 acetolactate synthase 2 catalytic subunit; Reviewe 96.24
TIGR00118 558 acolac_lg acetolactate synthase, large subunit, bi 96.21
PRK07525 588 sulfoacetaldehyde acetyltransferase; Validated 96.14
PRK07418 616 acetolactate synthase 3 catalytic subunit; Reviewe 96.11
PRK08199 557 thiamine pyrophosphate protein; Validated 96.1
PRK08273 597 thiamine pyrophosphate protein; Provisional 96.09
PRK08327 569 acetolactate synthase catalytic subunit; Validated 95.95
PRK07064 544 hypothetical protein; Provisional 95.86
TIGR03254 554 oxalate_oxc oxalyl-CoA decarboxylase. In a number 95.79
PLN02470 585 acetolactate synthase 95.71
PRK09124 574 pyruvate dehydrogenase; Provisional 95.67
PRK08266 542 hypothetical protein; Provisional 95.6
PRK09259 569 putative oxalyl-CoA decarboxylase; Validated 95.53
TIGR00173432 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohex 95.44
TIGR03457 579 sulphoacet_xsc sulfoacetaldehyde acetyltransferase 95.43
PRK06457 549 pyruvate dehydrogenase; Provisional 94.88
TIGR02720 575 pyruv_oxi_spxB pyruvate oxidase. Members of this f 94.76
COG0028 550 IlvB Thiamine pyrophosphate-requiring enzymes [ace 94.73
PRK08611 576 pyruvate oxidase; Provisional 94.36
TIGR03393 539 indolpyr_decarb indolepyruvate decarboxylase, Erwi 91.23
PLN02573 578 pyruvate decarboxylase 90.6
cd01408235 SIRT1 SIRT1: Eukaryotic group (class1) which inclu 89.83
cd01412224 SIRT5_Af1_CobB SIRT5_Af1_CobB: Eukaryotic, archaea 89.76
PRK00481242 NAD-dependent deacetylase; Provisional 89.12
COG2120237 Uncharacterized proteins, LmbE homologs [Function 88.72
PRK14138244 NAD-dependent deacetylase; Provisional 88.58
PTZ00408242 NAD-dependent deacetylase; Provisional 87.94
PRK00945171 acetyl-CoA decarbonylase/synthase complex subunit 87.58
TIGR00315162 cdhB CO dehydrogenase/acetyl-CoA synthase complex, 83.02
PLN02980 1655 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi 82.82
COG0299200 PurN Folate-dependent phosphoribosylglycinamide fo 81.32
PRK07449 568 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 80.72
>PLN00022 electron transfer flavoprotein subunit alpha; Provisional Back     alignment and domain information 
Probab=100.00  E-value=6.2e-98  Score=726.04  Aligned_cols=334  Identities=74%  Similarity=1.092  Sum_probs=290.7

Q ss_pred             cccccccceeEEEEEecCCccChHHHHHHHHHHhcCC-CCcEEEEEEcCCCCHHHHHHHHhhcC-CCccEEEEEeCCCCC
Q 018528           19 RPSISRSISTLVLGEHENGSIKSQSLSAVEAAKSLSD-DNSVSMLLAGSGPSFNEAVKHAASSH-PSISQVLVADSDKFA   96 (354)
Q Consensus        19 ~~~~~~~~~IlV~~E~~~g~l~~~slell~~A~~La~-~~~V~avv~G~~~~~~~~a~~l~~~~-~GaD~V~~~~~~~l~   96 (354)
                      ..+++|.|+||||+||.+|+++++|+|+|++|++|++ .++|.++++|.+...++.++++. .. ||+|+||++++|.++
T Consensus        20 ~~~~~~~m~i~V~~E~~~g~l~~~slEll~~Ar~La~~~~~v~avv~g~~~~~~~~a~~l~-~~~~Gad~V~~~~~~~l~   98 (356)
T PLN00022         20 IASQSRQISTLVVAEHEGGSVKPQSLSAVAAAKSLLGESSPISLLLAGSGPSLQQAASHAA-SSHPSVSEVLVADSDKLT   98 (356)
T ss_pred             HHHHhcCCeEEEEEeCcCCEeCHHHHHHHHHHHHhcCCCCceEEEEEcCCcchhhHHHHHh-hccCCCCEEEEecCchhc
Confidence            4567888999999999999999999999999999984 24799999987621356777776 22 699999999999999


Q ss_pred             CCCHHHHHHHHHHHHHhcCccEEEeCCCCCccchHHHHHHHcCCCceeeeEEeeCCcEEEEEccCcEEEEEEEecCCCCE
Q 018528           97 YPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDVIEISGSSQFVRPIYAGNALCTVRYTGANPC  176 (354)
Q Consensus        97 ~~~~e~~a~aLa~li~~~~P~lVL~g~T~~GrdlaprlAarL~~~lvtdv~~l~~~~~~~R~~ygG~~~a~i~~~~~~p~  176 (354)
                      .|+++.|+++|++++++++|++||+|+|.+||+|+||||++|++++++||++|+++..++||+|||++++++.+...+|+
T Consensus        99 ~y~~e~~a~al~~li~~~~P~~vL~~~T~~GrdlApRlAarL~~gl~aD~~~l~~~~~~~rp~~gG~~~a~i~~~~~~p~  178 (356)
T PLN00022         99 HPLAEPWAKLVVLAQQKGGYSHILAASTSFGKNVLPRAAALLDVSPITDVVRILDSNTFVRPIYAGNALATVRYKGSGPC  178 (356)
T ss_pred             ccChHHHHHHHHHHHHhcCCCEEEECCCCchhHHHHHHHHHhCCCeecCEEEEcCCCeEEEEecCCcEEEEEEeCCCCcE
Confidence            99999999999999999999999999999999999999999999999999999865579999999999999997777899


Q ss_pred             EEEEcCCCCCCCCCCCC-CCCCcceeeeecccccccCCCCceEEEEeeccCCCCCCCCCCcEEEEeCccCCChhcHHHHH
Q 018528          177 MLTVRATSFPMPKSSAE-SRSNGASISQVDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMIE  255 (354)
Q Consensus       177 v~Tvr~g~f~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~iVV~~GrG~~~~e~~~~~~  255 (354)
                      |+|+||+.|++.+.+.. +.+... ++..+...+..+.....++++...++...++|++|++||++|||++++|||++++
T Consensus       179 ~~Tvrpg~f~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~vVVsgGRGv~~~en~~l~e  257 (356)
T PLN00022        179 MLSIRPTSFPVTPALANSESNEAP-ISQVDLSLLDEDSVGKSRWVGLSVQDTERPDLGSAKVVVTGGRGLKSAENFKMLE  257 (356)
T ss_pred             EEEECCCccccccccccccCCCcc-eEEeccccccccccCceEEEEEEccccCCCCcccCCEEEECCCccCCHHHHHHHH
Confidence            99999999987664431 011222 2222211000111234555665555555799999999999999999999999999


Q ss_pred             HHHHHhCCeecccHhhHhcCCCCCCceeccCCceeCCceEEEecccchhhhhhccCCCcEEEEEcCCCCCCcccccceEE
Q 018528          256 KLAEKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGL  335 (354)
Q Consensus       256 ~LA~~lga~vG~SRp~vd~gw~p~~~qIGqtG~~V~P~lYia~GISGa~QH~~G~~~s~~IVAIN~D~~ApIf~~aDygi  335 (354)
                      +||++|||+||||||+||+||+|+++|||||||+|+|+||||||||||+||++||++|++|||||+|||||||++|||||
T Consensus       258 eLA~~LGaavGaSRp~vD~GW~p~~~QIGqTGk~V~P~lYIA~GISGAiQH~~Gm~~s~~IVAIN~D~~APIF~~ADygI  337 (356)
T PLN00022        258 KLADKLGGAVGASRAAVDAGFVPNDLQVGQTGKIVAPELYIAVGISGAIQHLAGMKDSKVIVAINKDADAPIFQVADYGL  337 (356)
T ss_pred             HHHHHhCCceeccHHHHhCCCCChHheeccCCCCcCCcEEEEEecchHHHHHhhcccCCEEEEECCCCCCCchhhcCeeE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eecHHHHHHHHHhhcccCC
Q 018528          336 VGDLFEVIPELLEKFPEKK  354 (354)
Q Consensus       336 VgD~~~vlp~l~~~l~~~~  354 (354)
                      |||+++|||+|+|+||++|
T Consensus       338 VgD~~evlP~Lie~lk~~~  356 (356)
T PLN00022        338 VADLFEAVPELLEKLPEKK  356 (356)
T ss_pred             eeeHHHHHHHHHHHHHhcC
Confidence            9999999999999999876

>COG2025 FixB Electron transfer flavoprotein, alpha subunit [Energy production and conversion] Back     alignment and domain information
>PRK03363 fixB putative electron transfer flavoprotein FixB; Provisional Back     alignment and domain information
>PRK11916 electron transfer flavoprotein subunit YdiR; Provisional Back     alignment and domain information
>KOG3954 consensus Electron transfer flavoprotein, alpha subunit [Energy production and conversion] Back     alignment and domain information
>PF00766 ETF_alpha: Electron transfer flavoprotein FAD-binding domain; InterPro: IPR014731 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems Back     alignment and domain information
>cd01715 ETF_alpha The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases Back     alignment and domain information
>cd01985 ETF The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases Back     alignment and domain information
>PF01012 ETF: Electron transfer flavoprotein domain; InterPro: IPR014730 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems Back     alignment and domain information
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases Back     alignment and domain information
>PRK12342 hypothetical protein; Provisional Back     alignment and domain information
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed Back     alignment and domain information
>COG2086 FixA Electron transfer flavoprotein, beta subunit [Energy production and conversion] Back     alignment and domain information
>KOG3180 consensus Electron transfer flavoprotein, beta subunit [Energy production and conversion] Back     alignment and domain information
>PRK07979 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PF00205 TPP_enzyme_M: Thiamine pyrophosphate enzyme, central domain; InterPro: IPR012000 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor Back     alignment and domain information
>TIGR02418 acolac_catab acetolactate synthase, catabolic Back     alignment and domain information
>CHL00099 ilvB acetohydroxyacid synthase large subunit Back     alignment and domain information
>PRK07789 acetolactate synthase 1 catalytic subunit; Validated Back     alignment and domain information
>PRK08322 acetolactate synthase; Reviewed Back     alignment and domain information
>PRK06725 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK06112 acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>TIGR01504 glyox_carbo_lig glyoxylate carboligase Back     alignment and domain information
>PRK08617 acetolactate synthase; Reviewed Back     alignment and domain information
>PRK06048 acetolactate synthase 3 catalytic subunit; Reviewed Back     alignment and domain information
>PRK08527 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK06276 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>PRK08979 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK06882 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK11269 glyoxylate carboligase; Provisional Back     alignment and domain information
>PRK06466 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK06154 hypothetical protein; Provisional Back     alignment and domain information
>PRK08155 acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>PRK07710 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>PRK06965 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK07524 hypothetical protein; Provisional Back     alignment and domain information
>PRK07282 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>PRK06456 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>PRK06546 pyruvate dehydrogenase; Provisional Back     alignment and domain information
>PRK07092 benzoylformate decarboxylase; Reviewed Back     alignment and domain information
>PRK09107 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK05858 hypothetical protein; Provisional Back     alignment and domain information
>PRK08978 acetolactate synthase 2 catalytic subunit; Reviewed Back     alignment and domain information
>TIGR00118 acolac_lg acetolactate synthase, large subunit, biosynthetic type Back     alignment and domain information
>PRK07525 sulfoacetaldehyde acetyltransferase; Validated Back     alignment and domain information
>PRK07418 acetolactate synthase 3 catalytic subunit; Reviewed Back     alignment and domain information
>PRK08199 thiamine pyrophosphate protein; Validated Back     alignment and domain information
>PRK08273 thiamine pyrophosphate protein; Provisional Back     alignment and domain information
>PRK08327 acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>PRK07064 hypothetical protein; Provisional Back     alignment and domain information
>TIGR03254 oxalate_oxc oxalyl-CoA decarboxylase Back     alignment and domain information
>PLN02470 acetolactate synthase Back     alignment and domain information
>PRK09124 pyruvate dehydrogenase; Provisional Back     alignment and domain information
>PRK08266 hypothetical protein; Provisional Back     alignment and domain information
>PRK09259 putative oxalyl-CoA decarboxylase; Validated Back     alignment and domain information
>TIGR00173 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase Back     alignment and domain information
>TIGR03457 sulphoacet_xsc sulfoacetaldehyde acetyltransferase Back     alignment and domain information
>PRK06457 pyruvate dehydrogenase; Provisional Back     alignment and domain information
>TIGR02720 pyruv_oxi_spxB pyruvate oxidase Back     alignment and domain information
>COG0028 IlvB Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>PRK08611 pyruvate oxidase; Provisional Back     alignment and domain information
>TIGR03393 indolpyr_decarb indolepyruvate decarboxylase, Erwinia family Back     alignment and domain information
>PLN02573 pyruvate decarboxylase Back     alignment and domain information
>cd01408 SIRT1 SIRT1: Eukaryotic group (class1) which includes human sirtuins SIRT1-3 and yeast Hst1-4; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>cd01412 SIRT5_Af1_CobB SIRT5_Af1_CobB: Eukaryotic, archaeal and prokaryotic group (class3) which includes human sirtuin SIRT5, Archaeoglobus fulgidus Sir2-Af1, and E Back     alignment and domain information
>PRK00481 NAD-dependent deacetylase; Provisional Back     alignment and domain information
>COG2120 Uncharacterized proteins, LmbE homologs [Function unknown] Back     alignment and domain information
>PRK14138 NAD-dependent deacetylase; Provisional Back     alignment and domain information
>PTZ00408 NAD-dependent deacetylase; Provisional Back     alignment and domain information
>PRK00945 acetyl-CoA decarbonylase/synthase complex subunit epsilon; Provisional Back     alignment and domain information
>TIGR00315 cdhB CO dehydrogenase/acetyl-CoA synthase complex, epsilon subunit Back     alignment and domain information
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding Back     alignment and domain information
>COG0299 PurN Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK07449 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query354
1t9g_R333 Structure Of The Human Mcad:etf Complex Length = 33 1e-80
1efv_A315 Three-Dimensional Structure Of Human Electron Trans 3e-80
1efp_A307 Electron Transfer Flavoprotein (Etf) From Paracoccu 1e-68
1o94_D320 Ternary Complex Between Trimethylamine Dehydrogenas 2e-23
3clu_D321 Crystal Structure Of The R236k Mutant From Methylop 5e-23
3clt_D321 Crystal Structure Of The R236e Mutant Of Methylophi 9e-23
3clr_D321 Crystal Structure Of The R236a Etf Mutant From M. M 2e-22
3cls_D321 Crystal Structure Of The R236c Mutant Of Etf From M 2e-22
>pdb|1T9G|R Chain R, Structure Of The Human Mcad:etf Complex Length = 333 Back     alignment and structure 
Iteration: 1

 Score =  296 bits (758), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 165/335 (49%), Positives = 222/335 (66%), Gaps = 18/335 (5%)
Query: 21  SISRSISTLVLGEHENGSIKSQSLSAVEAAKSLSDDNSVSMLLAGSGPSFNEAVKHAASS 80
           S+ R  STLV+ EH N S+   +L+ + AA  L  +  VS L+AG+     + V      
Sbjct: 15  SLLRFQSTLVIAEHANDSLAPITLNTITAATRLGGE--VSCLVAGTK---CDKVAQDLCK 69
Query: 81  HPSISQVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDV 140
              I++VLVA  D +   + E    L+   Q++  Y+HI + + +FGKN+LPR AA L+V
Sbjct: 70  VAGIAKVLVAQHDVYKGLLPEELTPLILATQKQFNYTHICAGASAFGKNLLPRVAAKLEV 129
Query: 141 SPITDVIEISGSSQFVRPIYAGNALCTVRYTGANPCMLTVRATSFPMPKSSAESRSN--G 198
           +PI+D+I I     FVR IYAGNALCTV+       + +VR TSF    +S  S S+   
Sbjct: 130 APISDIIAIKSPDTFVRTIYAGNALCTVK-CDEKVKVFSVRGTSFDAAATSGGSASSEKA 188
Query: 199 ASISQVDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMIEKLA 258
           +S S V++S   +  + KS          +RP+L  A++VV+GGRGLKS ENFK++  LA
Sbjct: 189 SSTSPVEISEWLDQKLTKS----------DRPELTGAKVVVSGGRGLKSGENFKLLYDLA 238
Query: 259 EKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVA 318
           ++L AAVGA+RA VDAGFVPND+QVGQTGKIVAPELY+A G+SGAIQHLAGM+DSK IVA
Sbjct: 239 DQLHAAVGASRAAVDAGFVPNDMQVGQTGKIVAPELYIAVGISGAIQHLAGMKDSKTIVA 298
Query: 319 VNKDADAPIFQVADYGLVGDLFEVIPELLEKFPEK 353
           +NKD +APIFQVADYG+V DLF+V+PE+ E   +K
Sbjct: 299 INKDPEAPIFQVADYGIVADLFKVVPEMTEILKKK 333
>pdb|1EFV|A Chain A, Three-Dimensional Structure Of Human Electron Transfer Flavoprotein To 2.1 A Resolution Length = 315 Back     alignment and structure
>pdb|1EFP|A Chain A, Electron Transfer Flavoprotein (Etf) From Paracoccus Denitrificans Length = 307 Back     alignment and structure
>pdb|1O94|D Chain D, Ternary Complex Between Trimethylamine Dehydrogenase And Electron Transferring Flavoprotein Length = 320 Back     alignment and structure
>pdb|3CLU|D Chain D, Crystal Structure Of The R236k Mutant From Methylophilus Methylotrophus Etf Length = 321 Back     alignment and structure
>pdb|3CLT|D Chain D, Crystal Structure Of The R236e Mutant Of Methylophilus Methylotrophus Etf Length = 321 Back     alignment and structure
>pdb|3CLR|D Chain D, Crystal Structure Of The R236a Etf Mutant From M. Methylotrophus Length = 321 Back     alignment and structure
>pdb|3CLS|D Chain D, Crystal Structure Of The R236c Mutant Of Etf From Methylophilus Methylotrophus Length = 321 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query354
1efv_A315 Electron transfer flavoprotein; electron transport 1e-164
1efp_A307 ETF, protein (electron transfer flavoprotein); ele 1e-159
1o97_D320 Electron transferring flavoprotein alpha-subunit; 1e-135
3ih5_A217 Electron transfer flavoprotein alpha-subunit; alph 7e-29
3fet_A166 Electron transfer flavoprotein subunit alpha RELA 5e-08
>1efv_A Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 c.31.1.2 PDB: 2a1u_A* 1t9g_R* 2a1t_R* Length = 315 Back     alignment and structure
 Score =  459 bits (1183), Expect = e-164
 Identities = 158/327 (48%), Positives = 214/327 (65%), Gaps = 14/327 (4%)

Query: 27  STLVLGEHENGSIKSQSLSAVEAAKSLSDDNSVSMLLAGSGPSFNEAVKHAASSHPSISQ 86
           STLV+ EH N S+   +L+ + AA  L  +  VS L+AG+     + V         I++
Sbjct: 3   STLVIAEHANDSLAPITLNTITAATRLGGE--VSCLVAGTKC---DKVAQDLCKVAGIAK 57

Query: 87  VLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDV 146
           VLVA  D +   + E    L+   Q++  Y+HI + + +FGKN+LPR AA L+V+PI+D+
Sbjct: 58  VLVAQHDVYKGLLPEELTPLILATQKQFNYTHICAGASAFGKNLLPRVAAKLEVAPISDI 117

Query: 147 IEISGSSQFVRPIYAGNALCTVRYTGANPCMLTVRATSFPMPKSSAESRSNGASISQVDL 206
           I I     FVR IYAGNALCTV+       + +VR TSF     +A +    AS  +   
Sbjct: 118 IAIKSPDTFVRTIYAGNALCTVKCDEK-VKVFSVRGTSFD----AAATSGGSASSEKAS- 171

Query: 207 SALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVG 266
                  +  S ++      ++RP+L  A++VV+GGRGLKS ENFK++  LA++L AAVG
Sbjct: 172 ---STSPVEISEWLDQKLTKSDRPELTGAKVVVSGGRGLKSGENFKLLYDLADQLHAAVG 228

Query: 267 ATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAP 326
           A+RA VDAGFVPND+QVGQTGKIVAPELY+A G+SGAIQHLAGM+DSK IVA+NKD +AP
Sbjct: 229 ASRAAVDAGFVPNDMQVGQTGKIVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAP 288

Query: 327 IFQVADYGLVGDLFEVIPELLEKFPEK 353
           IFQVADYG+V DLF+V+PE+ E   +K
Sbjct: 289 IFQVADYGIVADLFKVVPEMTEILKKK 315
>1efp_A ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3 c.31.1.2 Length = 307 Back     alignment and structure
>1o97_D Electron transferring flavoprotein alpha-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 c.31.1.2 PDB: 1o95_D* 1o96_B* 1o94_D* 3clu_D* 3clt_D* 3clr_D* 3cls_D* Length = 320 Back     alignment and structure
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron} Length = 217 Back     alignment and structure
>3fet_A Electron transfer flavoprotein subunit alpha RELA protein; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: MSE; 2.05A {Thermoplasma acidophilum} Length = 166 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query354
1efv_A315 Electron transfer flavoprotein; electron transport 100.0
1o97_D320 Electron transferring flavoprotein alpha-subunit; 100.0
1efp_A307 ETF, protein (electron transfer flavoprotein); ele 100.0
3ih5_A217 Electron transfer flavoprotein alpha-subunit; alph 100.0
3fet_A166 Electron transfer flavoprotein subunit alpha RELA 99.95
1o97_C264 Electron transferring flavoprotein beta-subunit; F 99.92
1efp_B252 ETF, protein (electron transfer flavoprotein); ele 99.91
1efv_B255 Electron transfer flavoprotein; electron transport 99.9
1ozh_A 566 ALS, acetolactate synthase, catabolic; acetohydrox 96.19
4feg_A 603 Pyruvate oxidase; carbanion, structure activity re 95.69
3lq1_A 578 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 95.67
1ybh_A 590 Acetolactate synthase, chloroplast; acetohydroxyac 95.37
2pgn_A 589 Cyclohexane-1,2-dione hydrolase (CDH); three alpha 95.35
2q28_A 564 Oxalyl-COA decarboxylase; lyase, oxalate degradati 95.35
2c31_A 568 Oxalyl-COA decarboxylase; oxalate, thiamin diphosp 95.08
2iht_A 573 Carboxyethylarginine synthase; thiamin diphosphate 94.82
1t9b_A 677 Acetolactate synthase, mitochondrial; acetohydroxy 94.77
3eya_A 549 Pyruvate dehydrogenase [cytochrome]; pyruvate oxid 94.59
2x7j_A 604 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene - 94.47
2uz1_A 563 Benzaldehyde lyase; thiamine diphosphate, thiamine 94.36
1s5p_A235 NAD-dependent deacetylase; protein deacetylase, SI 93.71
2pan_A 616 Glyoxylate carboligase; thiamin-diphosphate (THDP) 93.63
1v5e_A 590 Pyruvate oxidase; oxidoreductase, flavoprotein; HE 93.57
1q6z_A 528 BFD, BFDC, benzoylformate decarboxylase; lyase, ca 93.53
1ma3_A253 SIR2-AF2, transcriptional regulatory protein, SIR2 93.39
1q1a_A289 HST2 protein; ternary complex, histone deacetylase 92.83
1yc5_A246 NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, 91.83
1m2k_A249 Silent information regulator 2; protein-ligand com 91.71
2hjh_A354 NAD-dependent histone deacetylase SIR2; protein, s 90.81
1q14_A361 HST2 protein; histone deacetylase, hydrolase; 2.50 90.65
3glr_A285 NAD-dependent deacetylase sirtuin-3, mitochondria; 88.56
1uan_A227 Hypothetical protein TT1542; rossmann-like, struct 88.36
3k35_A318 NAD-dependent deacetylase sirtuin-6; rossmann fold 88.19
1j8f_A323 SIRT2, sirtuin 2, isoform 1, silencing INFO; gene 88.05
3cf4_G170 Acetyl-COA decarboxylase/synthase epsilon subunit; 87.99
3riy_A273 NAD-dependent deacetylase sirtuin-5; desuccinylase 87.52
3pki_A355 NAD-dependent deacetylase sirtuin-6; ADP ribose, s 86.41
3u31_A290 SIR2A, transcriptional regulatory protein SIR2 hom 85.25
2ixd_A242 LMBE-related protein; hexamer, deacetylase, rossma 83.26
4iao_A492 NAD-dependent histone deacetylase SIR2; protein co 80.99
3hww_A 556 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 80.76
3okp_A394 GDP-mannose-dependent alpha-(1-6)-phosphatidylino 80.33
>1efv_A Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 c.31.1.2 PDB: 2a1u_A* 1t9g_R* 2a1t_R* Back     alignment and structure
Probab=100.00  E-value=1.4e-99  Score=731.74  Aligned_cols=314  Identities=49%  Similarity=0.791  Sum_probs=281.3

Q ss_pred             cceeEEEEEecCCccChHHHHHHHHHHhcCCCCcEEEEEEcCCCCHHHHHHHH-hhcCCCccEEEEEeCCCCCCCCHHHH
Q 018528           25 SISTLVLGEHENGSIKSQSLSAVEAAKSLSDDNSVSMLLAGSGPSFNEAVKHA-ASSHPSISQVLVADSDKFAYPIAEPW  103 (354)
Q Consensus        25 ~~~IlV~~E~~~g~l~~~slell~~A~~La~~~~V~avv~G~~~~~~~~a~~l-~~~~~GaD~V~~~~~~~l~~~~~e~~  103 (354)
                      ||++|||+||.+|+++++|+|+|++|++|+  ++|+++++|++  .++.++++ .  .+|+|++|+++++.|++|+++.|
T Consensus         1 ~m~~lv~~e~~~g~l~~~~~eal~aA~~La--~~V~av~~G~~--~~~~~~~a~~--a~GaDkv~~v~d~~l~~~~~~~~   74 (315)
T 1efv_A            1 MQSTLVIAEHANDSLAPITLNTITAATRLG--GEVSCLVAGTK--CDKVAQDLCK--VAGIAKVLVAQHDVYKGLLPEEL   74 (315)
T ss_dssp             -CEEEEECCEETTEECTHHHHHHHHHHTTT--SEEEEEEEESC--CHHHHHHHHH--STTCCEEEEEECGGGTTCCHHHH
T ss_pred             CceEEEEEEccCCCcCHHHHHHHHHHHHhc--CcEEEEEECCc--hHHHHHHHHH--hcCCCEEEEecCchhccCCHHHH
Confidence            688999999999999999999999999998  59999999987  56666666 5  69999999999999999999999


Q ss_pred             HHHHHHHHHhcCccEEEeCCCCCccchHHHHHHHcCCCceeeeEEeeCCcEEEEEccCcEEEEEEEecCCCCEEEEEcCC
Q 018528          104 AKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDVIEISGSSQFVRPIYAGNALCTVRYTGANPCMLTVRAT  183 (354)
Q Consensus       104 a~aLa~li~~~~P~lVL~g~T~~GrdlaprlAarL~~~lvtdv~~l~~~~~~~R~~ygG~~~a~i~~~~~~p~v~Tvr~g  183 (354)
                      +++|++++++++|++||+|+|++||+++||||++|++|+++||++++.+.+++||+|||+.++++. +.+.|+|+|+|++
T Consensus        75 a~~La~li~~~~pdlVL~g~ts~G~~laprlAa~L~~~~vtdv~~l~~~~~~~R~~~gG~~~~tv~-~~~~p~viTVr~~  153 (315)
T 1efv_A           75 TPLILATQKQFNYTHICAGASAFGKNLLPRVAAKLEVAPISDIIAIKSPDTFVRTIYAGNALCTVK-CDEKVKVFSVRGT  153 (315)
T ss_dssp             HHHHHHHHHHHCCSEEEEESSHHHHHHHHHHHHHHTCCCEEEECEEEETTEEEEEETTTTEEEEEE-ECCSSEEEEECGG
T ss_pred             HHHHHHHHHhcCCCEEEEcCCCCcchHHHHHHHHhCCCccccEEEeccCCEEEEEcCCCEEEEEEE-eCCCCeEEEEcCC
Confidence            999999999999999999999999999999999999999999999986559999999999999999 5566789999999


Q ss_pred             CCCCCCCCCCCCCCcceeeeecccccccCCCCceEEEEeeccCCCCCCCCCCcEEEEeCccCCChhcHHHHHHHHHHhCC
Q 018528          184 SFPMPKSSAESRSNGASISQVDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMIEKLAEKLGA  263 (354)
Q Consensus       184 ~f~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~iVV~~GrG~~~~e~~~~~~~LA~~lga  263 (354)
                      .|+|.+. ..  ++++ ++.++..    ......+++.....++++++|++|++|||||||++++|||+++++||++|||
T Consensus       154 ~f~~~~~-~~--~~~~-v~~~~~~----~~~~~~~~~~~~~~~~~~~~L~~A~ivVsgGrG~~~~e~f~~~~~LA~~Lga  225 (315)
T 1efv_A          154 SFDAAAT-SG--GSAS-SEKASST----SPVEISEWLDQKLTKSDRPELTGAKVVVSGGRGLKSGENFKLLYDLADQLHA  225 (315)
T ss_dssp             GSCCCCS-SS--CCCE-EEECCCC----CCCCSEEEEEEEECCCCSCCGGGCSEEEEECGGGCSTGGGHHHHHHHHHHTC
T ss_pred             CCCCCCC-CC--CCcc-eEEeccC----CCccceEEEEEEecccCCcCcCCCCEEEEcCCcCCChHHHHHHHHHHHHhCC
Confidence            9998665 22  2333 3323321    1123366554444446789999999999999999999999999999999999


Q ss_pred             eecccHhhHhcCCCCCCceeccCCceeCCceEEEecccchhhhhhccCCCcEEEEEcCCCCCCcccccceEEeecHHHHH
Q 018528          264 AVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVI  343 (354)
Q Consensus       264 ~vG~SRp~vd~gw~p~~~qIGqtG~~V~P~lYia~GISGa~QH~~G~~~s~~IVAIN~D~~ApIf~~aDygiVgD~~~vl  343 (354)
                      +||||||+||+||+|+++|||||||+|+|+||||||||||+||++||++||+||||||||+||||++||||||||+|+|+
T Consensus       226 ~vgaSR~~vd~Gw~~~~~QVGqTGk~V~P~lYiA~GISGAiQHlaGm~~s~~IVAIN~D~~ApIf~~ADygiVgDl~~v~  305 (315)
T 1efv_A          226 AVGASRAAVDAGFVPNDMQVGQTGKIVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVV  305 (315)
T ss_dssp             EEEECHHHHHTTSSCGGGBBSTTSBCCCCSEEEEESCCCCHHHHTTTTTCSEEEEEESCTTCGGGGTCSEEEESCHHHHH
T ss_pred             ceeecHHHHhCCCCCHHheeccCCcccCcceEEEecccCcHHHHhhcccCCEEEEEeCCCCCCcchhcCeEEeeeHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcccC
Q 018528          344 PELLEKFPEK  353 (354)
Q Consensus       344 p~l~~~l~~~  353 (354)
                      |+|+++||+|
T Consensus       306 P~L~~~l~~~  315 (315)
T 1efv_A          306 PEMTEILKKK  315 (315)
T ss_dssp             HHHHHHTC--
T ss_pred             HHHHHHHhcC
Confidence            9999999764
>1o97_D Electron transferring flavoprotein alpha-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 c.31.1.2 PDB: 1o95_D* 1o96_B* 1o94_D* 3clu_D* 3clt_D* 3clr_D* 3cls_D* Back     alignment and structure
>1efp_A ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3 c.31.1.2 Back     alignment and structure
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron} Back     alignment and structure
>3fet_A Electron transfer flavoprotein subunit alpha RELA protein; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: MSE; 2.05A {Thermoplasma acidophilum} Back     alignment and structure
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C* Back     alignment and structure
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3 Back     alignment and structure
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S* Back     alignment and structure
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A* Back     alignment and structure
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A* Back     alignment and structure
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes} Back     alignment and structure
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A* Back     alignment and structure
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A* Back     alignment and structure
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A* Back     alignment and structure
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A* Back     alignment and structure
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A* Back     alignment and structure
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A* Back     alignment and structure
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis} Back     alignment and structure
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A* Back     alignment and structure
>1s5p_A NAD-dependent deacetylase; protein deacetylase, SIR2 homologue, hydrolase; HET: ALY; 1.96A {Escherichia coli} SCOP: c.31.1.5 Back     alignment and structure
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli} Back     alignment and structure
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A* Back     alignment and structure
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X* Back     alignment and structure
>1ma3_A SIR2-AF2, transcriptional regulatory protein, SIR2 family; enzyme-substrate complex, protein binding, transcription; HET: ALY MES; 2.00A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1s7g_A* 1yc2_A* Back     alignment and structure
>1q1a_A HST2 protein; ternary complex, histone deacetylase, 2'-O-ADP ribose,, gene regulation; HET: ALY OAD; 1.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 PDB: 1szd_A* 1szc_A* 2od7_A* 2od9_A* 2qqf_A* 2qqg_A* 1q17_A* 2od2_A* Back     alignment and structure
>1yc5_A NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, SIRT1, nicotinamide, hydrolase; HET: ALY; 1.40A {Thermotoga maritima} SCOP: c.31.1.5 PDB: 2h2d_A* 2h2f_A 2h2g_A* 2h2h_A* 2h2i_A* 2h4f_A* 2h4j_A* 3d4b_A* 3d81_A* 3pdh_A* 2h4h_A* 3jr3_A* 2h59_A* Back     alignment and structure
>1m2k_A Silent information regulator 2; protein-ligand complex, gene regulation; HET: APR; 1.47A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1m2g_A* 1m2h_A* 1m2j_A* 1m2n_A* 1ici_A* Back     alignment and structure
>2hjh_A NAD-dependent histone deacetylase SIR2; protein, sirtuin, acetyl-ADP-ribose, nicotinamide, hydrolase; HET: XYQ; 1.85A {Saccharomyces cerevisiae} Back     alignment and structure
>1q14_A HST2 protein; histone deacetylase, hydrolase; 2.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 Back     alignment and structure
>3glr_A NAD-dependent deacetylase sirtuin-3, mitochondria; NAD dependent deacetylase, sirtuin, substrate peptide comple hydrolase, metal-binding; HET: ALY; 1.80A {Homo sapiens} PDB: 3gls_A 3glt_A* 3glu_A 4hd8_A* 4fvt_A* Back     alignment and structure
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1 Back     alignment and structure
>3k35_A NAD-dependent deacetylase sirtuin-6; rossmann fold, Zn-binding domain, structural genomics, struc genomics consortium, SGC, ADP-ribosylation; HET: APR; 2.00A {Homo sapiens} Back     alignment and structure
>1j8f_A SIRT2, sirtuin 2, isoform 1, silencing INFO; gene regulation, transferase; 1.70A {Homo sapiens} SCOP: c.31.1.5 Back     alignment and structure
>3cf4_G Acetyl-COA decarboxylase/synthase epsilon subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri} Back     alignment and structure
>3riy_A NAD-dependent deacetylase sirtuin-5; desuccinylase, demalonylase, posttranslational modification, binding domain, rossmann fold domain; HET: SLL NAD; 1.55A {Homo sapiens} SCOP: c.31.1.5 PDB: 3rig_A* 4f4u_A* 4f56_A* 4hda_A* 2b4y_A* 2nyr_A* 4g1c_A* Back     alignment and structure
>3pki_A NAD-dependent deacetylase sirtuin-6; ADP ribose, structural genomics, structural genomics consortium, SGC, hydrolase; HET: AR6; 2.04A {Homo sapiens} PDB: 3pkj_A* Back     alignment and structure
>3u31_A SIR2A, transcriptional regulatory protein SIR2 homologue; Zn-binding domain, rossmann fold domain; HET: MYK NAD; 2.20A {Plasmodium falciparum} PDB: 3u3d_A* 3jwp_A* Back     alignment and structure
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus} Back     alignment and structure
>4iao_A NAD-dependent histone deacetylase SIR2; protein complex, deacetylase, nucleus, hydrolase-trans complex; HET: APR; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A* Back     alignment and structure
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 354
d1efva2124 c.31.1.2 (A:208-331) C-terminal domain of the elec 1e-62
d3clsd2123 c.31.1.2 (D:196-318) C-terminal domain of the elec 1e-55
d1efva1188 c.26.2.3 (A:20-207) Large, alpha subunit of electr 6e-32
d1efpa1183 c.26.2.3 (A:2-184) Large, alpha subunit of electro 1e-26
d3clsd1192 c.26.2.3 (D:1-192) Large, alpha subunit of electro 6e-25
>d1efva2 c.31.1.2 (A:208-331) C-terminal domain of the electron transfer flavoprotein alpha subunit {Human (Homo sapiens) [TaxId: 9606]} Length = 124 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: C-terminal domain of the electron transfer flavoprotein alpha subunit
domain: C-terminal domain of the electron transfer flavoprotein alpha subunit
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  193 bits (493), Expect = 1e-62
 Identities = 89/123 (72%), Positives = 109/123 (88%)

Query: 228 ERPDLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPNDLQVGQTG 287
           +RP+L  A++VV+GGRGLKS ENFK++  LA++L AAVGA+RA VDAGFVPND+QVGQTG
Sbjct: 1   DRPELTGAKVVVSGGRGLKSGENFKLLYDLADQLHAAVGASRAAVDAGFVPNDMQVGQTG 60

Query: 288 KIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELL 347
           KIVAPELY+A G+SGAIQHLAGM+DSK IVA+NKD +APIFQVADYG+V DLF+V+PE+ 
Sbjct: 61  KIVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMT 120

Query: 348 EKF 350
           E  
Sbjct: 121 EIL 123
>d3clsd2 c.31.1.2 (D:196-318) C-terminal domain of the electron transfer flavoprotein alpha subunit {Methylophilus methylotrophus [TaxId: 17]} Length = 123 Back     information, alignment and structure
>d1efva1 c.26.2.3 (A:20-207) Large, alpha subunit of electron transfer flavoprotein ETFP, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 188 Back     information, alignment and structure
>d1efpa1 c.26.2.3 (A:2-184) Large, alpha subunit of electron transfer flavoprotein ETFP, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} Length = 183 Back     information, alignment and structure
>d3clsd1 c.26.2.3 (D:1-192) Large, alpha subunit of electron transfer flavoprotein ETFP, N-terminal domain {Methylophilus methylotrophus [TaxId: 17]} Length = 192 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query354
d1efva2124 C-terminal domain of the electron transfer flavopr 100.0
d3clsd2123 C-terminal domain of the electron transfer flavopr 100.0
d1efva1188 Large, alpha subunit of electron transfer flavopro 100.0
d3clsd1192 Large, alpha subunit of electron transfer flavopro 100.0
d1efpa1183 Large, alpha subunit of electron transfer flavopro 99.97
d1efpb_246 Small, beta subunit of electron transfer flavoprot 99.74
d3clsc1262 Small, beta subunit of electron transfer flavoprot 99.7
d1efvb_252 Small, beta subunit of electron transfer flavoprot 99.7
d1t9ba1171 Acetohydroxyacid synthase catalytic subunit {Baker 98.19
d2ez9a1183 Pyruvate oxidase {Lactobacillus plantarum [TaxId: 98.17
d1ozha1179 Catabolic acetolactate synthase {Klebsiella pneumo 98.14
d2ji7a1175 Oxalyl-CoA decarboxylase {Oxalobacter formigenes [ 97.93
d1q6za1160 Benzoylformate decarboxylase {Pseudomonas putida [ 97.8
d2djia1177 Pyruvate oxidase {Aerococcus viridans [TaxId: 1377 97.69
d1ybha1179 Acetohydroxyacid synthase catalytic subunit {Thale 97.59
d2ihta1177 Carboxyethylarginine synthase {Streptomyces clavul 97.46
d1zpda1175 Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 96.32
d1ma3a_252 AF0112, Sir2 homolog (Sir2-AF2) {Archaeon Archaeog 94.99
d1yc5a1245 NAD-dependent deacetylase NpdA {Thermotoga maritim 94.83
d1pvda1179 Pyruvate decarboxylase {Baker's yeast (Saccharomyc 94.71
d1uana_227 Hypothetical protein TT1542 {Thermus thermophilus 94.07
d1m2ka_249 AF1676, Sir2 homolog (Sir2-AF1?) {Archaeon Archaeo 93.57
d1s5pa_235 NAD-dependent deacetylase CobB {Escherichia coli [ 93.44
d2b4ya1267 NAD-dependent deacetylase sirtuin-5 {Human (Homo s 92.0
d1ovma1161 Indole-3-pyruvate decarboxylase {Enterobacter cloa 91.69
d1q1aa_289 Hst2 {Baker's yeast (Saccharomyces cerevisiae) [Ta 90.58
d1ytla1158 Acetyl-CoA decarbonylase/synthase complex epsilon 88.29
d1j8fa_323 Sirt2 histone deacetylase {Human (Homo sapiens) [T 82.55
>d1efva2 c.31.1.2 (A:208-331) C-terminal domain of the electron transfer flavoprotein alpha subunit {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: C-terminal domain of the electron transfer flavoprotein alpha subunit
domain: C-terminal domain of the electron transfer flavoprotein alpha subunit
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7e-64  Score=412.05  Aligned_cols=123  Identities=72%  Similarity=1.155  Sum_probs=121.5

Q ss_pred             CCCCCCCcEEEEeCccCCChhcHHHHHHHHHHhCCeecccHhhHhcCCCCCCceeccCCceeCCceEEEecccchhhhhh
Q 018528          229 RPDLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLA  308 (354)
Q Consensus       229 ~~~L~~A~iVV~~GrG~~~~e~~~~~~~LA~~lga~vG~SRp~vd~gw~p~~~qIGqtG~~V~P~lYia~GISGa~QH~~  308 (354)
                      ++||++|++|||+|||++++|||+++++||++|||++|||||+||+||+|+++||||||++|+|+||||||||||+||++
T Consensus         2 r~dl~~A~ivV~~GrG~~~~e~~~~~~~lA~~lga~vg~SR~~vd~gw~~~~~qIG~SG~~V~P~lyia~GISGa~QH~~   81 (124)
T d1efva2           2 RPELTGAKVVVSGGRGLKSGENFKLLYDLADQLHAAVGASRAAVDAGFVPNDMQVGQTGKIVAPELYIAVGISGAIQHLA   81 (124)
T ss_dssp             SCCGGGCSEEEEECGGGCSTGGGHHHHHHHHHHTCEEEECHHHHHTTSSCGGGBBSTTSBCCCCSEEEEESCCCCHHHHT
T ss_pred             CCCccCCCEEEECCCCcCCHHHHHHHHHHHHHhCCeeeEeehhhhCCCcccceeecccceEeCCcEEEEecchhHHHHHh
Confidence            57999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCcEEEEEcCCCCCCcccccceEEeecHHHHHHHHHhhcc
Q 018528          309 GMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKFP  351 (354)
Q Consensus       309 G~~~s~~IVAIN~D~~ApIf~~aDygiVgD~~~vlp~l~~~l~  351 (354)
                      ||++|++|||||+||+||||++||||||||+++|||+|+++||
T Consensus        82 Gi~~s~~IvAIN~D~~ApIf~~aD~giVgD~~evlp~L~e~lk  124 (124)
T d1efva2          82 GMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEILK  124 (124)
T ss_dssp             TTTTCSEEEEEESCTTCGGGGTCSEEEESCHHHHHHHHHHHTC
T ss_pred             hccCCCEEEEEeCCCCCCccccCCEEEeccHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999999999999986
>d3clsd2 c.31.1.2 (D:196-318) C-terminal domain of the electron transfer flavoprotein alpha subunit {Methylophilus methylotrophus [TaxId: 17]} Back     information, alignment and structure
>d1efva1 c.26.2.3 (A:20-207) Large, alpha subunit of electron transfer flavoprotein ETFP, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3clsd1 c.26.2.3 (D:1-192) Large, alpha subunit of electron transfer flavoprotein ETFP, N-terminal domain {Methylophilus methylotrophus [TaxId: 17]} Back     information, alignment and structure
>d1efpa1 c.26.2.3 (A:2-184) Large, alpha subunit of electron transfer flavoprotein ETFP, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1efpb_ c.26.2.3 (B:) Small, beta subunit of electron transfer flavoprotein ETFP {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d3clsc1 c.26.2.3 (C:1-262) Small, beta subunit of electron transfer flavoprotein ETFP {Methylophilus methylotrophus [TaxId: 17]} Back     information, alignment and structure
>d1efvb_ c.26.2.3 (B:) Small, beta subunit of electron transfer flavoprotein ETFP {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1t9ba1 c.31.1.3 (A:290-460) Acetohydroxyacid synthase catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2ez9a1 c.31.1.3 (A:183-365) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d1ozha1 c.31.1.3 (A:188-366) Catabolic acetolactate synthase {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d2ji7a1 c.31.1.3 (A:195-369) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]} Back     information, alignment and structure
>d1q6za1 c.31.1.3 (A:182-341) Benzoylformate decarboxylase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d2djia1 c.31.1.3 (A:187-363) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]} Back     information, alignment and structure
>d1ybha1 c.31.1.3 (A:281-459) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Back     information, alignment and structure
>d2ihta1 c.31.1.3 (A:198-374) Carboxyethylarginine synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d1zpda1 c.31.1.3 (A:188-362) Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 542]} Back     information, alignment and structure
>d1ma3a_ c.31.1.5 (A:) AF0112, Sir2 homolog (Sir2-AF2) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1yc5a1 c.31.1.5 (A:1-245) NAD-dependent deacetylase NpdA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1pvda1 c.31.1.3 (A:182-360) Pyruvate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1uana_ c.134.1.1 (A:) Hypothetical protein TT1542 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1m2ka_ c.31.1.5 (A:) AF1676, Sir2 homolog (Sir2-AF1?) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1s5pa_ c.31.1.5 (A:) NAD-dependent deacetylase CobB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2b4ya1 c.31.1.5 (A:36-302) NAD-dependent deacetylase sirtuin-5 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ovma1 c.31.1.3 (A:181-341) Indole-3-pyruvate decarboxylase {Enterobacter cloacae [TaxId: 550]} Back     information, alignment and structure
>d1q1aa_ c.31.1.5 (A:) Hst2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ytla1 c.31.1.6 (A:17-174) Acetyl-CoA decarbonylase/synthase complex epsilon subunit 2, ACDE2 {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1j8fa_ c.31.1.5 (A:) Sirt2 histone deacetylase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure