Citrus Sinensis ID: 018560

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350----
Protein Sequence
MMNSNAASSSTANPDAAGSPDPPAPRRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPVANRTDKVAFIQSNASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYLVKPRRLGDPSYLSWNRNPGGH
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEcccccccccccccccEEEEEcccccEEEEEEEEEccccccEEEEEEEccHHHHHHHHHHcccHHHHccccccccccccccccccccccEEEEccccccccccccEEEEcccEEcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccHHHHHHHccccccccccEEEEEEEEEEcccccccEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccccccccHcHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEcccccccccccccccEEEccccccEEEEEEEEcccccccEEEEEEcccHHHcccHEEEEccHHHHcccccccccccccccccccccccEcccHHHHHHcccccEEEcccccEEEEccccEEcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccHHHHHHHHHHccccccccEEEEEEEEcccEEEEccEEEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccc
Coil and Loop (DISEMBL)
mmnsnaassstanpdaagspdppaprrsskrpkyskftqqelpackpiltpkWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYetdcipvanrtdkvAFIQSNASKTCTRQITvtkhmkrpvYVYYQLDNFYQNHRRYVKsrndeqlkkrsktsetsqcepedttpdgkpivpcgliawslfndtytfsrnkrqltvnkngiawksdrdhkfgkevfpsnfqngtliggahlnesiplskqeDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILennyntysfsgKKKLVLSTTswlggkndFLGIAYLTVGGLCFFLALSFTIVYlvkprrlgdpsylswnrnpggh
Flexible Loop (DISEMBL)
mmnsnaassstanpdaagspdppaprrsskrpkyskftqqelpackpiltPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETdcipvanrtdkvafiqsnasktctrqitvtkhmkrpVYVYYQLDNFYQNHRRYVKsrndeqlkkrsktsetsqcepedttpdgkpiVPCGLIAWSLFNDTYTfsrnkrqltvnkngiawksdrdHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYLVKprrlgdpsylswnrnpggh
Low Complexity Region (SEG)
MMnsnaassstanpdaagspdppaprrsskrpkYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPVANRTDKVAFIQSNASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYLVKPRRLGDPSYLSWNRNPGGH
Disordered region (IsUnstruct)
*****************************************LPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPVANRTDKVAFIQSNASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYV******************************PIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYLVKPRRLGDPSYL*********
Disordered Region (DISOPRED)
*************************************TQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPVANRTDKVAFIQSNASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYLVKPRRLGDPSYL**N******
Disordered Region (DISEMBL)
**************************************QQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPVANRTDKVAFIQSNASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKS*************************DGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYLVKPRRLGDPSYLSWNRNPGGH
Disordered Region (DISPRO)
*******************************PKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPVANRTDKVAFIQSNASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYLVKPRRLG**S***********
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MMNSNAASSSTANPDAAGSPDPPAPRRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPVANRTDKVAFIQSNASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYLVKPRRLGDPSYLSWNRNPGGH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	354	2.2.26 [Sep-21-2011]
Q9SLK2	349	ALA-interacting subunit 3	yes	no	0.926	0.939	0.738	1e-147
Q9LTW0	350	ALA-interacting subunit 1	no	no	0.926	0.937	0.726	1e-145
Q8L8W0	350	ALA-interacting subunit 5	no	no	0.923	0.934	0.716	1e-144
Q9SA35	336	Putative ALA-interacting	no	no	0.898	0.946	0.711	1e-138
Q67YS6	343	Putative ALA-interacting	no	no	0.923	0.953	0.584	1e-112
Q96WW4	371	Invasion protein 1 OS=Sch	yes	no	0.892	0.851	0.362	6e-53
Q1MTQ5	396	Meiotically up-regulated	no	no	0.915	0.818	0.353	4e-49
Q5F362	372	Cell cycle control protei	yes	no	0.841	0.801	0.413	2e-48
Q8BHG3	353	Cell cycle control protei	yes	no	0.841	0.844	0.333	2e-46
Q3MIR4	351	Cell cycle control protei	yes	no	0.861	0.868	0.337	2e-46

>sp|Q9SLK2|ALIS3_ARATH ALA-interacting subunit 3 OS=Arabidopsis thaliana GN=ALIS3 PE=1 SV=1

 Score =  520 bits (1340), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 243/329 (73%), Positives = 276/329 (83%), Gaps = 1/329 (0%)

Query: 26  RRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDR 85
           R++SKRPKYSKFTQQELPACKPILTP WVI TFL+V + F+P+G+ SL AS+DVVEIVDR
Sbjct: 22  RKNSKRPKYSKFTQQELPACKPILTPGWVISTFLIVSVIFIPLGVISLFASQDVVEIVDR 81

Query: 86  YETDCIPVANRTDKVAFIQSNASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSR 145
           Y+T+CIP   RT+KVA+IQ +  K C R + VTK MK+P+YVYYQL+NFYQNHRRYVKSR
Sbjct: 82  YDTECIPAPARTNKVAYIQGDGDKVCNRDLKVTKRMKQPIYVYYQLENFYQNHRRYVKSR 141

Query: 146 NDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGI 205
           +D QL+     ++ S C+PED    G+PIVPCGLIAWSLFNDTY  SRN   L VNK GI
Sbjct: 142 SDSQLRSTKYENQISACKPEDDV-GGQPIVPCGLIAWSLFNDTYALSRNNVSLAVNKKGI 200

Query: 206 AWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGK 265
           AWKSD++HKFG +VFP NFQ G + GGA L+  IPLS+QEDLIVWMRTAALPTFRKLYGK
Sbjct: 201 AWKSDKEHKFGNKVFPKNFQKGNITGGATLDPRIPLSEQEDLIVWMRTAALPTFRKLYGK 260

Query: 266 IEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLA 325
           IE DLE  D I V L NNYNTYSF+GKKKLVLSTTSWLGGKNDFLGIAYLTVGG+CF LA
Sbjct: 261 IESDLEMGDTIHVKLNNNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGICFILA 320

Query: 326 LSFTIVYLVKPRRLGDPSYLSWNRNPGGH 354
           L+FTI+YLVKPRRLGDPSYLSWNRNPGG 
Sbjct: 321 LAFTIMYLVKPRRLGDPSYLSWNRNPGGR 349

Required for the lipid transport activity of the ALA/ALIS P4-ATPase complex.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9LTW0|ALIS1_ARATH ALA-interacting subunit 1 OS=Arabidopsis thaliana GN=ALIS1 PE=1 SV=1

 Score =  514 bits (1325), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 239/329 (72%), Positives = 279/329 (84%), Gaps = 1/329 (0%)

Query: 26  RRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDR 85
           RR+SKRPKYSKFTQQELPACKPILTP WVI TFL++ + F+P+G+ SL AS+DVVEIVDR
Sbjct: 23  RRNSKRPKYSKFTQQELPACKPILTPGWVISTFLIISVIFIPLGVISLFASQDVVEIVDR 82

Query: 86  YETDCIPVANRTDKVAFIQSNASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSR 145
           Y++ CIP+++R +KVA+IQ   +K+CTR + V K MK+P+YVYYQL+NFYQNHRRYVKSR
Sbjct: 83  YDSACIPLSDRANKVAYIQGTGNKSCTRTLIVPKRMKQPIYVYYQLENFYQNHRRYVKSR 142

Query: 146 NDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGI 205
           +D QL+     ++   C+PED    G+PIVPCGLIAWSLFNDTY  SRN + LTVNK GI
Sbjct: 143 SDSQLRSVKDENQIDACKPEDDF-GGQPIVPCGLIAWSLFNDTYVLSRNNQGLTVNKKGI 201

Query: 206 AWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGK 265
           AWKSD++HKFGK VFP NFQ G L GGA L+ + PLS QEDLIVWMRTAALPTFRKLYGK
Sbjct: 202 AWKSDKEHKFGKNVFPKNFQKGNLTGGASLDPNKPLSDQEDLIVWMRTAALPTFRKLYGK 261

Query: 266 IEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLA 325
           IE DLE+ + I V L+NNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGG+CF LA
Sbjct: 262 IESDLEKGENIQVTLQNNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGICFVLA 321

Query: 326 LSFTIVYLVKPRRLGDPSYLSWNRNPGGH 354
           L+FT++YLVKPRRLGDP+YLSWNR PGG 
Sbjct: 322 LAFTVMYLVKPRRLGDPTYLSWNRIPGGR 350

Required for the lipid transport activity of the ALA/ALIS P4-ATPase complex.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8L8W0|ALIS5_ARATH ALA-interacting subunit 5 OS=Arabidopsis thaliana GN=ALIS5 PE=1 SV=1

 Score =  511 bits (1317), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 235/328 (71%), Positives = 274/328 (83%), Gaps = 1/328 (0%)

Query: 26  RRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDR 85
           +++SKRPKYS+FTQQELPACKPILTP+WVILTFLV G+ F+P+G+  L AS+ VVEIVDR
Sbjct: 22  KKTSKRPKYSRFTQQELPACKPILTPRWVILTFLVAGVVFIPLGVICLFASQGVVEIVDR 81

Query: 86  YETDCIPVANRTDKVAFIQSNASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSR 145
           Y+TDCIP ++R + VA+IQ    K C R ITVTK MK PVYVYYQL+NFYQNHRRYVKSR
Sbjct: 82  YDTDCIPTSSRNNMVAYIQGEGDKICKRTITVTKAMKHPVYVYYQLENFYQNHRRYVKSR 141

Query: 146 NDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGI 205
           ND QL+   +  +   C PED    G+PIVPCGL+AWSLFNDTY+FSRN +QL VNK GI
Sbjct: 142 NDAQLRSPKEEHDVKTCAPEDNV-GGEPIVPCGLVAWSLFNDTYSFSRNSQQLLVNKKGI 200

Query: 206 AWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGK 265
           +WKSDR++KFGK VFP NFQ G  IGG  LN S PLS+QEDLIVWMRTAALPTFRKLYGK
Sbjct: 201 SWKSDRENKFGKNVFPKNFQKGAPIGGGTLNISKPLSEQEDLIVWMRTAALPTFRKLYGK 260

Query: 266 IEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLA 325
           IE DL   D I V+L+NNYNTYSF+G+KKLVLSTTSWLGG+NDFLGIAYLTVG +C FLA
Sbjct: 261 IETDLHAGDTITVLLQNNYNTYSFNGQKKLVLSTTSWLGGRNDFLGIAYLTVGSICLFLA 320

Query: 326 LSFTIVYLVKPRRLGDPSYLSWNRNPGG 353
           ++F ++YLVKPR+LGDPSYLSWNR+ GG
Sbjct: 321 VTFAVLYLVKPRQLGDPSYLSWNRSAGG 348

Required for the lipid transport activity of the ALA/ALIS P4-ATPase complex.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SA35|ALIS4_ARATH Putative ALA-interacting subunit 4 OS=Arabidopsis thaliana GN=ALIS4 PE=2 SV=2

 Score =  492 bits (1266), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 227/319 (71%), Positives = 267/319 (83%), Gaps = 1/319 (0%)

Query: 35  SKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPVA 94
           S+FTQQELPACKPILTPKWVILTFLV G+ F+P+G+  L AS+ V+EIVDRY+TDCIP++
Sbjct: 17  SRFTQQELPACKPILTPKWVILTFLVSGVVFIPLGVICLFASQGVIEIVDRYDTDCIPLS 76

Query: 95  NRTDKVAFIQSNASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRS 154
           +R +KV +IQ    K C R ITVTK MK PVYVYYQL+N+YQNHRRYVKSR D QL+   
Sbjct: 77  SRDNKVRYIQGLEDKRCNRTITVTKTMKNPVYVYYQLENYYQNHRRYVKSRQDGQLRSPK 136

Query: 155 KTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGIAWKSDRDHK 214
              ET  C PEDT   G+PIVPCGL+AWSLFNDTY F+RN ++L VNK  I+WKSDR+ K
Sbjct: 137 DEHETKSCAPEDTL-GGQPIVPCGLVAWSLFNDTYDFTRNNQKLPVNKKDISWKSDRESK 195

Query: 215 FGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEEND 274
           FGK VFP NFQ G+LIGG  L++ IPLS+QEDLIVWMRTAALPTFRKLYGKI+ DL+  D
Sbjct: 196 FGKNVFPKNFQKGSLIGGKSLDQDIPLSEQEDLIVWMRTAALPTFRKLYGKIDTDLQAGD 255

Query: 275 IIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYLV 334
            I V+L+NNYNTYSF+GKKKLVLSTTSWLGG+NDFLGIAYLTVG +C FLA+SF+++YL 
Sbjct: 256 TIKVLLQNNYNTYSFNGKKKLVLSTTSWLGGRNDFLGIAYLTVGSICLFLAVSFSVLYLA 315

Query: 335 KPRRLGDPSYLSWNRNPGG 353
           KPR+LGDPSYLSWNR+ GG
Sbjct: 316 KPRQLGDPSYLSWNRSAGG 334

Arabidopsis thaliana (taxid: 3702)

>sp|Q67YS6|ALIS2_ARATH Putative ALA-interacting subunit 2 OS=Arabidopsis thaliana GN=ALIS2 PE=2 SV=1

 Score =  405 bits (1042), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 194/332 (58%), Positives = 253/332 (76%), Gaps = 5/332 (1%)

Query: 19  SPDPPAPRRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRD 78
           +PD  +  RS +     +F QQ+LPACKP+LTP  VI  F+++G  F+PIG+ +L ASRD
Sbjct: 11  APDQSSFLRSRRSKALYQFKQQKLPACKPVLTPISVITVFMLMGFVFIPIGLITLRASRD 70

Query: 79  VVEIVDRYETDCIPVANRTDKVAFI-QSNASKTCTRQITVTKHMKRPVYVYYQLDNFYQN 137
            +EI+DRY+ +CIP   RT+K+ +I  S+  K CTR + V K+MK P+++YYQLDN+YQN
Sbjct: 71  AIEIIDRYDVECIPEEYRTNKLLYITDSSIPKNCTRYLKVQKYMKAPIFIYYQLDNYYQN 130

Query: 138 HRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQ 197
           HRRYVKSR+D+QL    + S TS CEPE+++ +G PIVPCGLIAWS+FNDT+TFSR + +
Sbjct: 131 HRRYVKSRSDQQLLHGLEYSHTSSCEPEESS-NGLPIVPCGLIAWSMFNDTFTFSRERTK 189

Query: 198 LTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALP 257
           L V++N IAWKSDR+HKFGK V+P NFQNGTLIGGA L+  IPLS QED IVWMR AAL 
Sbjct: 190 LNVSRNNIAWKSDREHKFGKNVYPINFQNGTLIGGAKLDPKIPLSDQEDFIVWMRAAALL 249

Query: 258 TFRKLYGKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTV 317
           +FRKLYG+IE DLE   +++V L NNYNTYSFSG+KKL+LST++WLGG+NDFLGI YL V
Sbjct: 250 SFRKLYGRIEEDLEPGKVVEVNLMNNYNTYSFSGQKKLILSTSNWLGGRNDFLGITYLVV 309

Query: 318 GGLCFFLALSFTIVYLVKPRRLGDPSYLSWNR 349
           G     +++ F +++L  PR  GD    SWN+
Sbjct: 310 GSSSIVISIIFMLLHLKNPRPYGDN---SWNK 338

Arabidopsis thaliana (taxid: 3702)

>sp|Q96WW4|IVN1_SCHPO Invasion protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ivn1 PE=3 SV=1

 Score =  208 bits (529), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 129/356 (36%), Positives = 187/356 (52%), Gaps = 40/356 (11%)

Query: 30  KRPKYSKFTQQELPACKPILTPKWVILTFL-VVGIAFVPIGITSLLASRDVVEIVDRYET 88
           KRP  S+F QQ LPA + I TP W +L  L ++GI F P+G    +ASR V E+   Y T
Sbjct: 16  KRPDKSRFVQQTLPAWQFIFTP-WTVLPLLFLLGIVFAPLGAGMFVASRRVKELRIDY-T 73

Query: 89  DCIPVANR---------------TDKVAFIQSNASKTCTRQITVTKHMKRPVYVYYQLDN 133
           DC+ + +                   V  +  ++   CT +  + + M  PV+ +Y+L N
Sbjct: 74  DCMNIGDEFKQVPSTNIEFQYKNVKNVTAMWKSSGDVCTLRFQIPEEMTSPVFAFYRLKN 133

Query: 134 FYQNHRRYVKSRNDEQLKKRSKTSETSQ----CEPEDTTPDGKPIVPCGLIAWSLFNDTY 189
           FYQNHRRY  S +  QL   ++T    +    C+P +   +GKP  PCG+IA SLFND+Y
Sbjct: 134 FYQNHRRYTVSADMFQLLGEARTVAQLKSYGFCKPLEANEEGKPYYPCGIIANSLFNDSY 193

Query: 190 TF--------SRNKRQL-TVNKNGIAWKSDRD------HKFGKEVFPSNFQNGTLIGGAH 234
           +         S N   L  +  NG AW  DR+      +   + V P N+    +    +
Sbjct: 194 SSLLRYESFDSSNSLGLYNMTTNGTAWPEDRERYKKTKYNASQIVPPPNW--AKMFPNGY 251

Query: 235 LNESIP-LSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILENNYNTYSFSGKK 293
            +++IP +S  +   +WMR AALPTF KL  +      +  I ++ +  N+    + G K
Sbjct: 252 TDDNIPDVSTWDAFQIWMRAAALPTFSKLALRNVTTALQPGIYEMNITYNFPVTEYKGTK 311

Query: 294 KLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYLVKPRRLGDPSYLSWNR 349
            ++ STTS +GGKN FLGI Y  +GGLC    +  +I  L+KPRR+GDP YLSWNR
Sbjct: 312 TIMFSTTSVIGGKNYFLGILYFVIGGLCAASGVILSIACLIKPRRVGDPRYLSWNR 367

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q1MTQ5|MUG89_SCHPO Meiotically up-regulated gene 89 protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mug89 PE=1 SV=1

 Score =  195 bits (496), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 130/368 (35%), Positives = 186/368 (50%), Gaps = 44/368 (11%)

Query: 24  APRRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIV 83
            P   ++ P  + F QQ + + +P+LTPK V+  F V+GI F P+G   L AS  V E+V
Sbjct: 16  GPVAKTRAPPNTSFRQQRIKSWQPLLTPKIVLPLFFVLGIIFGPLGGGLLYASSIVQELV 75

Query: 84  DRYETDCIPVANRTD---------KVAFIQSNA-----------------------SKTC 111
             Y TDC  +A+  +           +F QS                            C
Sbjct: 76  VDY-TDCETLASYDEFSAVPSKKYTASFDQSGTIGFDKESTYWKLEKILDKDLDMDVNYC 134

Query: 112 TRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKTSET---SQCEPEDTT 168
             + TV   +K P+++YY+L NF+QNHRRY KS +++QL+  + T++      C P +  
Sbjct: 135 IIRFTVPSVLKAPIFIYYRLTNFFQNHRRYAKSVDEKQLQGVALTADEVKGGNCFPLEVN 194

Query: 169 PDGKPIVPCGLIAWSLFNDTYTFSR---NKRQLTVNKNGIAWKSDRDHKFGKEVFPSNFQ 225
            D KP  PCGLIA SLFNDT++  R   +    T +   IAW SD+         P +  
Sbjct: 195 EDDKPYYPCGLIANSLFNDTFSSLRLLDDNSVYTFSTKNIAWASDKRRFLKTNYSPDDVA 254

Query: 226 ---NGTL-IGGAHLNESIP-LSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVIL 280
              N  L     +   ++P LS  E+L VWMRTA LPTF KL  + + D       ++ +
Sbjct: 255 PPPNWVLRYPDGYTESNMPDLSTMENLQVWMRTAGLPTFSKLAMRNDNDDIFPGTYEIKI 314

Query: 281 ENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYLVKPRRLG 340
              +   SF G K LVL+T S LGGKN FLGIAY+ V  +C  L   FT+ + ++PR+L 
Sbjct: 315 GLFFPVKSFDGTKSLVLTTRSVLGGKNPFLGIAYIVVSAVCVVLGTVFTLRHFIRPRKLA 374

Query: 341 DPSYLSWN 348
           D  YL+W+
Sbjct: 375 DHRYLNWD 382

Has a role in meiosis.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q5F362|CC50A_CHICK Cell cycle control protein 50A OS=Gallus gallus GN=TMEM30A PE=2 SV=1

 Score =  192 bits (489), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 187/331 (56%), Gaps = 33/331 (9%)

Query: 29  SKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYET 88
           +++P  + F QQ LPA +PILT   V+  F ++G+ F+PIGI   + S ++ E    YE 
Sbjct: 34  TRKPDNTAFKQQRLPAWQPILTAGTVLPAFFIIGLIFIPIGIGIFVTSNNIRE----YEI 89

Query: 89  DCIPV-----ANRTDKVAFIQSNASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVK 143
           D   V      N+   V++  S    TCT   T+    +  V++YY L NFYQNHRRYVK
Sbjct: 90  DYTGVEPSSPCNKCLNVSW-DSTPPCTCTINFTLEHSFESNVFMYYGLSNFYQNHRRYVK 148

Query: 144 SRNDEQLK--KRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDT---YTFSRNKR-Q 197
           SR+D QL     S  + + +CEP  T  D KPI PCG IA S+FNDT   Y    + R  
Sbjct: 149 SRDDSQLNGDNSSLLNPSKECEPYRTNED-KPIAPCGAIANSMFNDTLELYHIENDTRTA 207

Query: 198 LTVNKNGIAWKSDRDHKF----GKEVFPSNFQNGT----LIGGAHLNESIPLSK---QED 246
           +T+ K GIAW +D++ KF    G     + FQ  T         ++ +S P +     ED
Sbjct: 208 ITLIKKGIAWWTDKNVKFRNPKGDGNLTALFQGTTKPVNWPKPVYMLDSEPDNNGFINED 267

Query: 247 LIVWMRTAALPTFRKLYGKIEVDLEENDIID-----VILENNYNTYSFSGKKKLVLSTTS 301
            IVWMRTAALPTFRKLY  IE        +      + +  NY  +SF G+K+++LST S
Sbjct: 268 FIVWMRTAALPTFRKLYRLIERKSNLQPTLQAGKYSLNITYNYPVHSFDGRKRMILSTIS 327

Query: 302 WLGGKNDFLGIAYLTVGGLCFFLALSFTIVY 332
           W+GGKN FLGIAY+TVG +CFFL +   I++
Sbjct: 328 WMGGKNPFLGIAYITVGSICFFLGVVLLIIH 358

Gallus gallus (taxid: 9031)

>sp|Q8BHG3|CC50B_MOUSE Cell cycle control protein 50B OS=Mus musculus GN=Tmem30b PE=2 SV=1

 Score =  186 bits (473), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/348 (33%), Positives = 169/348 (48%), Gaps = 50/348 (14%)

Query: 24  APRRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIV 83
           A  R + +P  + FTQQ LPA +P+L+    +  F   G+AF+ +G+    +S  + E+ 
Sbjct: 5   ATARGAHQPDNTAFTQQRLPAWQPLLSAGIALPLFFCAGLAFIGLGLGLFYSSNGIKELE 64

Query: 84  DRYET-----DCIPVANRTDKVAFIQSNASKTCTRQITVTKHMKRPVYVYYQLDNFYQNH 138
             Y       DC   A +    A         C+   T+ +    PVY+YY+L NFYQN+
Sbjct: 65  YDYTGNPGTGDCSVCAAKGQGRA---PPPGCACSWSFTLPELFPGPVYLYYELSNFYQNN 121

Query: 139 RRYVKSRNDEQLKKRSKT--SETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKR 196
           RRY  SR+D QL   +       ++C P     DG PI PCG IA SLFND+++    ++
Sbjct: 122 RRYGVSRDDAQLSGLASALRHPANECAPYQFRSDGLPIAPCGAIANSLFNDSFSLWHQRQ 181

Query: 197 ------QLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHL----------NESIP 240
                 ++ +++  IAW +D   K         F+N  L+ G+            N   P
Sbjct: 182 PSDPFVEVPLDRTAIAWWTDYHVK---------FRNPPLVNGSLALAFRGTAPPPNWHRP 232

Query: 241 LSK-----------QEDLIVWMRTAALPTFRKLYGKIEVDLEENDI----IDVILENNYN 285
           + +            +D +VWMRTAALPTFRKLY +I        +      V +  NY 
Sbjct: 233 VYELSPDPNNTGFINQDFVVWMRTAALPTFRKLYARIRQGNYSAGLPRGTYRVNITYNYP 292

Query: 286 TYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYL 333
             +F G K ++LS  SW+GGKN FLGIAYL VG LC  +     +VY+
Sbjct: 293 VRAFGGHKLIILSNISWMGGKNPFLGIAYLVVGSLCIVMGFVMLVVYI 340

Mus musculus (taxid: 10090)

>sp|Q3MIR4|CC50B_HUMAN Cell cycle control protein 50B OS=Homo sapiens GN=TMEM30B PE=2 SV=1

 Score =  186 bits (472), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/341 (33%), Positives = 168/341 (49%), Gaps = 36/341 (10%)

Query: 24  APRRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIV 83
           A  R + +P  + FTQQ LPA +P+L+    +  F   G+AF+ +G+    +S  + E+ 
Sbjct: 5   ATARGAHQPDNTAFTQQRLPAWQPLLSASIALPLFFCAGLAFIGLGLGLYYSSNGIKELE 64

Query: 84  DRYETDCIPVANRTDKVAFIQSNASK---TCTRQITVTKHMKRPVYVYYQLDNFYQNHRR 140
             Y  D     N +   A  Q  A     +C    ++ +  + PVY+YY+L NFYQN+RR
Sbjct: 65  YDYTGD-PGTGNCSVCAAAGQGRALPPPCSCAWYFSLPELFQGPVYLYYELTNFYQNNRR 123

Query: 141 YVKSRNDEQLKKRSKT--SETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKR-- 196
           Y  SR+D QL           ++C P   +  G PI PCG IA SLFND+++    ++  
Sbjct: 124 YGVSRDDAQLSGLPSALRHPVNECAPYQRSAAGLPIAPCGAIANSLFNDSFSLWHQRQPG 183

Query: 197 ----QLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQ-------- 244
               ++ ++++GIAW +D   KF          NG+L          P  ++        
Sbjct: 184 GPYVEVPLDRSGIAWWTDYHVKFRNP----PLVNGSLALAFQGTAPPPNWRRPVYELSPD 239

Query: 245 --------EDLIVWMRTAALPTFRKLYGKIEVDLEENDI----IDVILENNYNTYSFSGK 292
                   +D +VWMRTAALPTFRKLY +I        +      V +  NY   +F G 
Sbjct: 240 PNNTGFINQDFVVWMRTAALPTFRKLYARIRQGNYSAGLPRGAYRVNITYNYPVRAFGGH 299

Query: 293 KKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYL 333
           K L+ S+ SW+GGKN FLGIAYL VG LC        +VY+
Sbjct: 300 KLLIFSSISWMGGKNPFLGIAYLVVGSLCILTGFVMLVVYI 340

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	354
225462291	349	PREDICTED: ALA-interacting subunit 3 [Vi	0.929	0.942	0.787	1e-156
388521419	343	unknown [Lotus japonicus]	0.954	0.985	0.761	1e-155
356556656	344	PREDICTED: ALA-interacting subunit 3-lik	0.968	0.997	0.756	1e-154
449444288	343	PREDICTED: ALA-interacting subunit 3-lik	0.926	0.956	0.768	1e-154
356557044	344	PREDICTED: ALA-interacting subunit 3-lik	0.968	0.997	0.762	1e-154
363807744	344	uncharacterized protein LOC100796102 [Gl	0.968	0.997	0.736	1e-151
356525734	344	PREDICTED: ALA-interacting subunit 3-lik	0.949	0.976	0.769	1e-151
255550745	350	conserved hypothetical protein [Ricinus	0.929	0.94	0.761	1e-149
224098834	350	predicted protein [Populus trichocarpa]	0.935	0.945	0.725	1e-147
297853368	349	LEM3 (ligand-effect modulator 3) family	0.926	0.939	0.747	1e-147

>gi|225462291|ref|XP_002265244.1| PREDICTED: ALA-interacting subunit 3 [Vitis vinifera] gi|297736110|emb|CBI24148.3| unnamed protein product [Vitis vinifera]

 Score =  556 bits (1433), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 260/330 (78%), Positives = 291/330 (88%), Gaps = 1/330 (0%)

Query: 25  PRRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVD 84
           PRR+SKRPKYS+FTQQELPACKPILTP+WVI  F++VGI F+PIG+ +L ASRDVVEIVD
Sbjct: 21  PRRNSKRPKYSRFTQQELPACKPILTPRWVISAFMLVGIIFIPIGVAALFASRDVVEIVD 80

Query: 85  RYETDCIPVANRTDKVAFIQSNASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKS 144
           RYETDCIP   R DKV +IQ   +K C R +TV K MK+P+YVYYQLDNFYQNHRRYVKS
Sbjct: 81  RYETDCIPEEFRNDKVNYIQKPGNKPCNRTLTVPKKMKQPIYVYYQLDNFYQNHRRYVKS 140

Query: 145 RNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNG 204
           RNDEQL+  +  +ETS C+PED   +G  IVPCGLIAWSLFNDTY FSRN  QL++NK G
Sbjct: 141 RNDEQLRSGNSANETSDCKPEDYA-NGAVIVPCGLIAWSLFNDTYNFSRNNEQLSLNKKG 199

Query: 205 IAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYG 264
           I+WKSDR+HKFGK+V+P NFQNGTLIGGA LNESIPLS+QEDLIVWMRTAALPTFRKLYG
Sbjct: 200 ISWKSDREHKFGKDVYPKNFQNGTLIGGATLNESIPLSEQEDLIVWMRTAALPTFRKLYG 259

Query: 265 KIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFL 324
           KIEVDL+ ND I V LENNYNTYSF+GKKKLVLSTTSWLGGKNDFLGIAYLTVGG+C FL
Sbjct: 260 KIEVDLQINDTIQVSLENNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGICIFL 319

Query: 325 ALSFTIVYLVKPRRLGDPSYLSWNRNPGGH 354
           A++FT+VYLVKPRRLGDPSYLSWNRNPGGH
Sbjct: 320 AMAFTVVYLVKPRRLGDPSYLSWNRNPGGH 349

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388521419|gb|AFK48771.1| unknown [Lotus japonicus]

 Score =  554 bits (1428), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 259/340 (76%), Positives = 297/340 (87%), Gaps = 2/340 (0%)

Query: 16  AAGSPDPPAP-RRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLL 74
           +AGS DP A  RR +KRPKYSKFTQQELPACKPILTP+ VI  FL+V I F+PIG+ SL+
Sbjct: 5   SAGSNDPTAATRRQTKRPKYSKFTQQELPACKPILTPRAVISAFLIVTIVFIPIGVASLI 64

Query: 75  ASRDVVEIVDRYETDCIPVANRTDKVAFIQSNASKTCTRQITVTKHMKRPVYVYYQLDNF 134
           ASRDVVEI+ RYE DC+P    +D+V +IQS+A KTCTR+I V K MK P+YVYYQLDNF
Sbjct: 65  ASRDVVEIIHRYEADCVPGNWSSDEVGYIQSSADKTCTREIHVEKRMKSPIYVYYQLDNF 124

Query: 135 YQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRN 194
           YQNHRRYVKSRNDEQL+  SK + TS C+PED   +G PI+PCGLIAWS+FNDTY+FSRN
Sbjct: 125 YQNHRRYVKSRNDEQLRDSSKANSTSGCKPEDYV-NGVPILPCGLIAWSMFNDTYSFSRN 183

Query: 195 KRQLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTA 254
              LTVNK GI+WKSDR+HKFG +VFP NFQNGT+IGGAHLNE+IPLS+QEDLIVWMRTA
Sbjct: 184 NNNLTVNKKGISWKSDREHKFGDDVFPKNFQNGTIIGGAHLNETIPLSEQEDLIVWMRTA 243

Query: 255 ALPTFRKLYGKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAY 314
           ALPTFRKLYGKIE+DLE+ D+I V+L+NNYNTYSF+GKKKLVLSTTSWLGGKNDFLGIAY
Sbjct: 244 ALPTFRKLYGKIEMDLEKGDVIKVVLQNNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAY 303

Query: 315 LTVGGLCFFLALSFTIVYLVKPRRLGDPSYLSWNRNPGGH 354
           LTVGGL FFL++ FTIVY V+PR+LGDPSYLSWNRNPGGH
Sbjct: 304 LTVGGLSFFLSMVFTIVYFVEPRQLGDPSYLSWNRNPGGH 343

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356556656|ref|XP_003546639.1| PREDICTED: ALA-interacting subunit 3-like [Glycine max]

 Score =  552 bits (1422), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 261/345 (75%), Positives = 295/345 (85%), Gaps = 2/345 (0%)

Query: 10  STANPDAAGSPDPPAPRRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIG 69
           ST+N   AGS D  A RR SKRPKYSKFTQQELPACKPILTP+ VI  FL+V I F+PIG
Sbjct: 2   STSNAGGAGSNDSNATRRQSKRPKYSKFTQQELPACKPILTPRAVISAFLIVTIVFIPIG 61

Query: 70  ITSLLASRDVVEIVDRYETDCIPVANRTDKVAFIQSNASKTCTRQITVTKHMKRPVYVYY 129
           + SL+AS DVVEI+DRY+  CIP +N TDKVA+IQ+   K C RQ+TV K MK P+YVYY
Sbjct: 62  VASLIASHDVVEIIDRYDLRCIP-SNVTDKVAYIQTPGEKQCNRQLTVDKRMKSPIYVYY 120

Query: 130 QLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTY 189
           QLDNFYQNHRRYVKSRNDEQL+   K +  S CEPE+   +GK I+PCGLIAWSLFNDTY
Sbjct: 121 QLDNFYQNHRRYVKSRNDEQLRDSGKANSVSGCEPENNA-NGKAILPCGLIAWSLFNDTY 179

Query: 190 TFSRNKRQLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIV 249
           +FSRN + LTVNK  I+WKSDRDHKFG +VFP NFQNG++IGG  LNESIPLS+QEDLIV
Sbjct: 180 SFSRNSKNLTVNKKDISWKSDRDHKFGSDVFPKNFQNGSIIGGGSLNESIPLSEQEDLIV 239

Query: 250 WMRTAALPTFRKLYGKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDF 309
           WMRTAALPTFRKLYGKIEVDLE+ D+I+V L NNYNTYSF+GKKKLVLSTTS+LGGKNDF
Sbjct: 240 WMRTAALPTFRKLYGKIEVDLEKGDVINVNLHNNYNTYSFNGKKKLVLSTTSFLGGKNDF 299

Query: 310 LGIAYLTVGGLCFFLALSFTIVYLVKPRRLGDPSYLSWNRNPGGH 354
           LGIAYLTVGGL FFL+++FTIVYLVKPR+LGDPSYLSWNRNPGGH
Sbjct: 300 LGIAYLTVGGLSFFLSMAFTIVYLVKPRQLGDPSYLSWNRNPGGH 344

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449444288|ref|XP_004139907.1| PREDICTED: ALA-interacting subunit 3-like [Cucumis sativus] gi|449475853|ref|XP_004154570.1| PREDICTED: ALA-interacting subunit 3-like [Cucumis sativus]

 Score =  550 bits (1418), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 253/329 (76%), Positives = 290/329 (88%), Gaps = 1/329 (0%)

Query: 26  RRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDR 85
           RR+SKRPKYS+FTQQELPACKPILTP+WVI  F++V I FVPIG+ SL ASRDVVEI+DR
Sbjct: 16  RRNSKRPKYSRFTQQELPACKPILTPRWVISAFMLVSIIFVPIGVASLFASRDVVEIIDR 75

Query: 86  YETDCIPVANRTDKVAFIQSNASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSR 145
           YET+CIP   R+DKV FIQ  A+K C R ITV K MK+P+YVYYQLDNFYQNHRRYV+SR
Sbjct: 76  YETECIPERFRSDKVGFIQGTANKICRRNITVPKRMKQPIYVYYQLDNFYQNHRRYVQSR 135

Query: 146 NDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGI 205
           +D+QL+      +TS C+PED   +G+P+VPCGLIAWSLFNDTY F+ NK+Q+ +NK GI
Sbjct: 136 SDKQLRDPGSERDTSSCKPEDNW-NGQPVVPCGLIAWSLFNDTYNFTLNKKQVAINKVGI 194

Query: 206 AWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGK 265
           +WKSDR+HKFGK VFP NFQ G + GG  LNES+PLS+QEDLIVWMRTAALPTFRKLYGK
Sbjct: 195 SWKSDREHKFGKNVFPKNFQKGNITGGKKLNESVPLSQQEDLIVWMRTAALPTFRKLYGK 254

Query: 266 IEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLA 325
           IEVDLE+ND+IDV+LENNYNTYSF+GKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLA
Sbjct: 255 IEVDLEKNDVIDVVLENNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLA 314

Query: 326 LSFTIVYLVKPRRLGDPSYLSWNRNPGGH 354
           ++FT+VYLVKPRRLGDPSYLSWNRNP GH
Sbjct: 315 MAFTVVYLVKPRRLGDPSYLSWNRNPSGH 343

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356557044|ref|XP_003546828.1| PREDICTED: ALA-interacting subunit 3-like [Glycine max]

 Score =  550 bits (1417), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 266/349 (76%), Positives = 297/349 (85%), Gaps = 6/349 (1%)

Query: 6   AASSSTANPDAAGSPDPPAPRRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAF 65
           A+SS+T     AGS DP A RR++KRPKYSKFTQQELPACKPILTP+ VI  FL+V I F
Sbjct: 2   ASSSATG----AGSTDPTAARRNTKRPKYSKFTQQELPACKPILTPRAVISAFLLVSIVF 57

Query: 66  VPIGITSLLASRDVVEIVDRYETDCIPVANRTDKVAFIQSNASKTCTRQITVTKHMKRPV 125
           VPIG+ SL+ASR VVEIV RYE+ CIP    TDKVA+IQS A KTC   + V KHMK P+
Sbjct: 58  VPIGVASLIASRKVVEIVFRYESTCIP-HEVTDKVAYIQSPADKTCKISLPVDKHMKSPI 116

Query: 126 YVYYQLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLF 185
           YVYYQLDNFYQNHRRYVKSR+DEQL+ R + + TS C PED   +GK IVPCGLIAWSLF
Sbjct: 117 YVYYQLDNFYQNHRRYVKSRSDEQLRDRREENSTSACNPEDIA-NGKAIVPCGLIAWSLF 175

Query: 186 NDTYTFSRNKRQLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQE 245
           NDTY+FSR+ + LTVNKNGI+WKSDR+HKFGK+VFP NFQ+  + GGA LNESIPLSKQE
Sbjct: 176 NDTYSFSRDNKNLTVNKNGISWKSDREHKFGKDVFPKNFQSSAIRGGASLNESIPLSKQE 235

Query: 246 DLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGG 305
           DLIVWMRTAALPTFRKLYGKIEVDL   D I+V L+NNYNTYSF+GKKKLVLSTTSWLGG
Sbjct: 236 DLIVWMRTAALPTFRKLYGKIEVDLNAGDQINVTLQNNYNTYSFNGKKKLVLSTTSWLGG 295

Query: 306 KNDFLGIAYLTVGGLCFFLALSFTIVYLVKPRRLGDPSYLSWNRNPGGH 354
           KNDFLGIAYLTVGGLCFFLAL+FT+VY VKPR+LGDPSYLSWNRNPGGH
Sbjct: 296 KNDFLGIAYLTVGGLCFFLALAFTVVYFVKPRQLGDPSYLSWNRNPGGH 344

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363807744|ref|NP_001242684.1| uncharacterized protein LOC100796102 [Glycine max] gi|255635427|gb|ACU18066.1| unknown [Glycine max]

 Score =  541 bits (1394), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 254/345 (73%), Positives = 292/345 (84%), Gaps = 2/345 (0%)

Query: 10  STANPDAAGSPDPPAPRRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIG 69
           ST++   AGS D  A RR SKRPKYSKFTQQELPACKPILTP+ VI  FL+V I F+PIG
Sbjct: 2   STSDAGGAGSNDSHATRRQSKRPKYSKFTQQELPACKPILTPRAVISAFLIVTIVFIPIG 61

Query: 70  ITSLLASRDVVEIVDRYETDCIPVANRTDKVAFIQSNASKTCTRQITVTKHMKRPVYVYY 129
           + SL+AS DVVEI+DRY++ CIP +N TDKVA+IQ+   K C RQ+TV K MK P+YVYY
Sbjct: 62  VASLIASHDVVEIIDRYDSHCIP-SNVTDKVAYIQTPGEKPCNRQLTVEKRMKSPIYVYY 120

Query: 130 QLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTY 189
           QLDNFYQNHRRYVKSRND+QL+   K S  S CEPE+   +G  I+PCGLIAWSLFNDTY
Sbjct: 121 QLDNFYQNHRRYVKSRNDDQLRDSGKASSVSGCEPENNV-NGMAILPCGLIAWSLFNDTY 179

Query: 190 TFSRNKRQLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIV 249
           +FSRN   LTVNK GI+WKSDRDHKFG +VFP NFQNG +IGG  L+E++PLS+ EDLIV
Sbjct: 180 SFSRNSNNLTVNKTGISWKSDRDHKFGSDVFPKNFQNGPIIGGGGLDENVPLSQHEDLIV 239

Query: 250 WMRTAALPTFRKLYGKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDF 309
           WMRTAALPTFRKLYGKIEVDLE+ D+I+V L NNYNTYSF+GKKKLVLSTTSWLGGKNDF
Sbjct: 240 WMRTAALPTFRKLYGKIEVDLEKGDVINVNLHNNYNTYSFNGKKKLVLSTTSWLGGKNDF 299

Query: 310 LGIAYLTVGGLCFFLALSFTIVYLVKPRRLGDPSYLSWNRNPGGH 354
           LGIAYLTVGGL FFL+++FT+VYLVK R+LGDPSYLSWNR+PGGH
Sbjct: 300 LGIAYLTVGGLSFFLSMAFTVVYLVKSRQLGDPSYLSWNRSPGGH 344

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356525734|ref|XP_003531478.1| PREDICTED: ALA-interacting subunit 3-like [Glycine max]

 Score =  541 bits (1393), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 260/338 (76%), Positives = 289/338 (85%), Gaps = 2/338 (0%)

Query: 16  AAGSPDPPAPRRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLA 75
            AGS DP A RR++KRPKYSKFTQQELPACKPILTP+ VI  FL+V I FVPIG+ SL+A
Sbjct: 8   GAGSTDPTAARRNTKRPKYSKFTQQELPACKPILTPRAVISAFLLVSIVFVPIGVASLIA 67

Query: 76  SRDVVEIVDRYETDCIPVANRTDKVAFIQSNASKTCTRQITVTKHMKRPVYVYYQLDNFY 135
           SR VVEIV RYE+ CIP    TDKVA+IQS A KTC   + V KHMK P+YVYYQLDNFY
Sbjct: 68  SRKVVEIVSRYESTCIP-DGVTDKVAYIQSPADKTCHISLPVHKHMKSPIYVYYQLDNFY 126

Query: 136 QNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNK 195
           QNHRRYVKSR+DEQL+   + + T+ C+PED   +GK IVPCGLIAWSLFNDTY+FSR+ 
Sbjct: 127 QNHRRYVKSRSDEQLRDHREENSTNACKPEDIA-NGKAIVPCGLIAWSLFNDTYSFSRDN 185

Query: 196 RQLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAA 255
           + LTVNKNGI+WKSDR+HKFGK+VFP NFQ+  + GGA LN SIPLSKQEDLIVWMRTAA
Sbjct: 186 KNLTVNKNGISWKSDREHKFGKDVFPKNFQSSAIRGGATLNVSIPLSKQEDLIVWMRTAA 245

Query: 256 LPTFRKLYGKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYL 315
           LPTFRKLYGKIEVDL E D I V L+NNYNTYSF+GKKKLVLSTTSWLGGKNDFLGIAYL
Sbjct: 246 LPTFRKLYGKIEVDLNEGDNITVTLQNNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYL 305

Query: 316 TVGGLCFFLALSFTIVYLVKPRRLGDPSYLSWNRNPGG 353
           TVGGLCFFLAL+FTIVY VKPR+LGDPSYLSWNRNPGG
Sbjct: 306 TVGGLCFFLALAFTIVYFVKPRQLGDPSYLSWNRNPGG 343

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255550745|ref|XP_002516421.1| conserved hypothetical protein [Ricinus communis] gi|223544456|gb|EEF45976.1| conserved hypothetical protein [Ricinus communis]

 Score =  534 bits (1375), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 252/331 (76%), Positives = 284/331 (85%), Gaps = 2/331 (0%)

Query: 25  PRRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVD 84
           PRR+SKRPKYS+FTQQELPACKPILTP+WVI  F++V I F+PIGI SL AS+DVVEI+D
Sbjct: 21  PRRNSKRPKYSRFTQQELPACKPILTPRWVISAFILVSIVFIPIGIASLTASQDVVEIID 80

Query: 85  RYETDCIPVANRTDKVAFIQS-NASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVK 143
           RYET+CIP  NRTDKV +IQS +  K C R I VTK MK+P+YVYYQLDNFYQNHRRYVK
Sbjct: 81  RYETECIPAQNRTDKVGYIQSPDTDKRCNRTIRVTKRMKQPIYVYYQLDNFYQNHRRYVK 140

Query: 144 SRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKN 203
           SR+DEQL+  S  +ETS C+PEDT  +G  IVPCGLIAWSLFNDTY+FS N  +L VNK 
Sbjct: 141 SRSDEQLRSLSSENETSNCKPEDTV-NGIAIVPCGLIAWSLFNDTYSFSLNSMELQVNKK 199

Query: 204 GIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLY 263
            I+WKSDRDHKFGK+VFP NFQ G L GGA LN S PLS+QEDLIVWMRTAALPTFRKLY
Sbjct: 200 DISWKSDRDHKFGKDVFPKNFQMGDLRGGATLNTSKPLSEQEDLIVWMRTAALPTFRKLY 259

Query: 264 GKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFF 323
           GKIE DL+ ND + + L+NNYNTYSF GKKKLVLSTT+WLGGKNDFLGIAYLTVGG+CFF
Sbjct: 260 GKIEQDLQPNDELHITLQNNYNTYSFDGKKKLVLSTTTWLGGKNDFLGIAYLTVGGICFF 319

Query: 324 LALSFTIVYLVKPRRLGDPSYLSWNRNPGGH 354
           LA+SFT+VYL+KPRRLGDPSYLSWNR PGG 
Sbjct: 320 LAMSFTVVYLIKPRRLGDPSYLSWNRTPGGR 350

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224098834|ref|XP_002311284.1| predicted protein [Populus trichocarpa] gi|222851104|gb|EEE88651.1| predicted protein [Populus trichocarpa]

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 240/331 (72%), Positives = 282/331 (85%)

Query: 24  APRRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIV 83
           APRR+SKRPKYSKFTQQELPACKPILTP+WV+  F+++ I F+PIGI  LL SRDVVE+ 
Sbjct: 20  APRRNSKRPKYSKFTQQELPACKPILTPRWVVSAFMIIAIVFIPIGIACLLGSRDVVEVS 79

Query: 84  DRYETDCIPVANRTDKVAFIQSNASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVK 143
            RYE DCIP  NR++KV FIQS+A+KTCT  +T+ K MK+P+YVYYQLDNFYQNHRRYVK
Sbjct: 80  KRYEIDCIPPENRSNKVQFIQSSANKTCTISMTIPKRMKKPIYVYYQLDNFYQNHRRYVK 139

Query: 144 SRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKN 203
           SR+D+QLK  SK ++TS C+PEDTT  G  IVPCGLIAWS+FNDTY FSR  ++LTVNK 
Sbjct: 140 SRSDKQLKSLSKETDTSSCKPEDTTAGGAAIVPCGLIAWSMFNDTYNFSRLNQELTVNKK 199

Query: 204 GIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLY 263
           GIAWKSD+  +FGK+VFP NFQ G L GG  LNE IPL++QEDL+VWMRTAALPTFRKLY
Sbjct: 200 GIAWKSDKQKRFGKDVFPKNFQGGGLQGGKILNEKIPLNEQEDLMVWMRTAALPTFRKLY 259

Query: 264 GKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFF 323
           GKIEVDLE N++I+V L+NNYNTYSF+GKKKLVLSTTSW+GG+NDFLGIAYLTVG +C  
Sbjct: 260 GKIEVDLEANEVINVTLDNNYNTYSFNGKKKLVLSTTSWIGGRNDFLGIAYLTVGMICLA 319

Query: 324 LALSFTIVYLVKPRRLGDPSYLSWNRNPGGH 354
           LA+ FT VY +KPRRLGDP++LSWNR PG  
Sbjct: 320 LAMGFTAVYFIKPRRLGDPTFLSWNRGPGSQ 350

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297853368|ref|XP_002894565.1| LEM3 (ligand-effect modulator 3) family protein [Arabidopsis lyrata subsp. lyrata] gi|297340407|gb|EFH70824.1| LEM3 (ligand-effect modulator 3) family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  527 bits (1357), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 246/329 (74%), Positives = 280/329 (85%), Gaps = 1/329 (0%)

Query: 26  RRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDR 85
           R++SKRPKYSKFTQQELPACKPILTP WVI TFL+V + F+P+G+ SL AS+DVVEIVDR
Sbjct: 22  RKNSKRPKYSKFTQQELPACKPILTPGWVISTFLIVSVIFIPLGVISLFASQDVVEIVDR 81

Query: 86  YETDCIPVANRTDKVAFIQSNASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSR 145
           Y+T+CIP   RT+K+A+IQ +  K CTR + VTK MK+PVYVYYQL+NFYQNHRRYVKSR
Sbjct: 82  YDTECIPEPARTNKIAYIQGDGDKVCTRDLKVTKRMKQPVYVYYQLENFYQNHRRYVKSR 141

Query: 146 NDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGI 205
           +D QL+     ++ S C+PED    G+PIVPCGLIAWSLFNDTY  SRN   L VNK GI
Sbjct: 142 SDSQLRSPKSENQISACKPEDDV-GGQPIVPCGLIAWSLFNDTYALSRNNVSLAVNKKGI 200

Query: 206 AWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGK 265
           AWKSD++HKFG +VFP NFQ G + GGA L+  IPLS+QEDLIVWMRTAALPTFRKLYGK
Sbjct: 201 AWKSDKEHKFGNKVFPKNFQKGNITGGATLDPRIPLSEQEDLIVWMRTAALPTFRKLYGK 260

Query: 266 IEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLA 325
           IE DLE  DII V L+NNYNTYSF+GKKKLVLSTTSWLGGKNDFLGIAYLTVGG+CFFLA
Sbjct: 261 IESDLEMGDIIHVTLKNNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGICFFLA 320

Query: 326 LSFTIVYLVKPRRLGDPSYLSWNRNPGGH 354
           L+FTI+YLVKPRRLGDPSYLSWNRNPGG 
Sbjct: 321 LAFTIMYLVKPRRLGDPSYLSWNRNPGGR 349

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	354
TAIR|locus:2020018	349	AT1G54320 [Arabidopsis thalian	0.901	0.914	0.740	9.1e-132
TAIR|locus:2087695	350	ALIS1 "ALA-interacting subunit	0.901	0.911	0.725	7.3e-130
TAIR|locus:2206400	350	ALIS5 "ALA-interacting subunit	0.901	0.911	0.718	6.6e-129
TAIR|locus:2032780	336	AT1G16360 [Arabidopsis thalian	0.898	0.946	0.711	1.2e-127
TAIR|locus:2161453	343	AT5G46150 "AT5G46150" [Arabido	0.875	0.903	0.603	4.6e-105
DICTYBASE|DDB_G0276567	312	DDB_G0276567 "CDC50/LEM3 famil	0.813	0.923	0.456	3.9e-60
ZFIN|ZDB-GENE-040704-26	372	tmem30aa "transmembrane protei	0.5	0.475	0.420	1.6e-53
ZFIN|ZDB-GENE-030131-5884	369	tmem30ab "transmembrane protei	0.5	0.479	0.414	1.6e-53
UNIPROTKB|Q17QL5	361	TMEM30A "Uncharacterized prote	0.488	0.479	0.414	1.6e-53
UNIPROTKB|E2R2Z8	361	TMEM30A "Uncharacterized prote	0.488	0.479	0.414	6.9e-53

TAIR|locus:2020018 AT1G54320 [Arabidopsis thaliana (taxid:3702)]

 Score = 1292 (459.9 bits), Expect = 9.1e-132, P = 9.1e-132
 Identities = 237/320 (74%), Positives = 268/320 (83%)

Query:    34 YSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPV 93
             YSKFTQQELPACKPILTP WVI TFL+V + F+P+G+ SL AS+DVVEIVDRY+T+CIP 
Sbjct:    30 YSKFTQQELPACKPILTPGWVISTFLIVSVIFIPLGVISLFASQDVVEIVDRYDTECIPA 89

Query:    94 ANRTDKVAFIQSNASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKR 153
               RT+KVA+IQ +  K C R + VTK MK+P+YVYYQL+NFYQNHRRYVKSR+D QL+  
Sbjct:    90 PARTNKVAYIQGDGDKVCNRDLKVTKRMKQPIYVYYQLENFYQNHRRYVKSRSDSQLRST 149

Query:   154 SKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGIAWKSDRDH 213
                ++ S C+PED    G+PIVPCGLIAWSLFNDTY  SRN   L VNK GIAWKSD++H
Sbjct:   150 KYENQISACKPEDDV-GGQPIVPCGLIAWSLFNDTYALSRNNVSLAVNKKGIAWKSDKEH 208

Query:   214 KFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEEN 273
             KFG +VFP NFQ G + GGA L+  IPLS+QEDLIVWMRTAALPTFRKLYGKIE DLE  
Sbjct:   209 KFGNKVFPKNFQKGNITGGATLDPRIPLSEQEDLIVWMRTAALPTFRKLYGKIESDLEMG 268

Query:   274 DIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYL 333
             D I V L NNYNTYSF+GKKKLVLSTTSWLGGKNDFLGIAYLTVGG+CF LAL+FTI+YL
Sbjct:   269 DTIHVKLNNNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGICFILALAFTIMYL 328

Query:   334 VKPRRLGDPSYLSWNRNPGG 353
             VKPRRLGDPSYLSWNRNPGG
Sbjct:   329 VKPRRLGDPSYLSWNRNPGG 348

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

TAIR|locus:2087695 ALIS1 "ALA-interacting subunit 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1274 (453.5 bits), Expect = 7.3e-130, P = 7.3e-130
 Identities = 232/320 (72%), Positives = 271/320 (84%)

Query:    34 YSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPV 93
             YSKFTQQELPACKPILTP WVI TFL++ + F+P+G+ SL AS+DVVEIVDRY++ CIP+
Sbjct:    31 YSKFTQQELPACKPILTPGWVISTFLIISVIFIPLGVISLFASQDVVEIVDRYDSACIPL 90

Query:    94 ANRTDKVAFIQSNASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKR 153
             ++R +KVA+IQ   +K+CTR + V K MK+P+YVYYQL+NFYQNHRRYVKSR+D QL+  
Sbjct:    91 SDRANKVAYIQGTGNKSCTRTLIVPKRMKQPIYVYYQLENFYQNHRRYVKSRSDSQLRSV 150

Query:   154 SKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGIAWKSDRDH 213
                ++   C+PED    G+PIVPCGLIAWSLFNDTY  SRN + LTVNK GIAWKSD++H
Sbjct:   151 KDENQIDACKPEDDF-GGQPIVPCGLIAWSLFNDTYVLSRNNQGLTVNKKGIAWKSDKEH 209

Query:   214 KFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEEN 273
             KFGK VFP NFQ G L GGA L+ + PLS QEDLIVWMRTAALPTFRKLYGKIE DLE+ 
Sbjct:   210 KFGKNVFPKNFQKGNLTGGASLDPNKPLSDQEDLIVWMRTAALPTFRKLYGKIESDLEKG 269

Query:   274 DIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYL 333
             + I V L+NNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGG+CF LAL+FT++YL
Sbjct:   270 ENIQVTLQNNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGICFVLALAFTVMYL 329

Query:   334 VKPRRLGDPSYLSWNRNPGG 353
             VKPRRLGDP+YLSWNR PGG
Sbjct:   330 VKPRRLGDPTYLSWNRIPGG 349

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0016020 "membrane" evidence=ISS

GO:0015914 "phospholipid transport" evidence=IDA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

TAIR|locus:2206400 ALIS5 "ALA-interacting subunit 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 1265 (450.4 bits), Expect = 6.6e-129, P = 6.6e-129
 Identities = 230/320 (71%), Positives = 266/320 (83%)

Query:    34 YSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPV 93
             YS+FTQQELPACKPILTP+WVILTFLV G+ F+P+G+  L AS+ VVEIVDRY+TDCIP 
Sbjct:    30 YSRFTQQELPACKPILTPRWVILTFLVAGVVFIPLGVICLFASQGVVEIVDRYDTDCIPT 89

Query:    94 ANRTDKVAFIQSNASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKR 153
             ++R + VA+IQ    K C R ITVTK MK PVYVYYQL+NFYQNHRRYVKSRND QL+  
Sbjct:    90 SSRNNMVAYIQGEGDKICKRTITVTKAMKHPVYVYYQLENFYQNHRRYVKSRNDAQLRSP 149

Query:   154 SKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGIAWKSDRDH 213
              +  +   C PED    G+PIVPCGL+AWSLFNDTY+FSRN +QL VNK GI+WKSDR++
Sbjct:   150 KEEHDVKTCAPEDNV-GGEPIVPCGLVAWSLFNDTYSFSRNSQQLLVNKKGISWKSDREN 208

Query:   214 KFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEEN 273
             KFGK VFP NFQ G  IGG  LN S PLS+QEDLIVWMRTAALPTFRKLYGKIE DL   
Sbjct:   209 KFGKNVFPKNFQKGAPIGGGTLNISKPLSEQEDLIVWMRTAALPTFRKLYGKIETDLHAG 268

Query:   274 DIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYL 333
             D I V+L+NNYNTYSF+G+KKLVLSTTSWLGG+NDFLGIAYLTVG +C FLA++F ++YL
Sbjct:   269 DTITVLLQNNYNTYSFNGQKKLVLSTTSWLGGRNDFLGIAYLTVGSICLFLAVTFAVLYL 328

Query:   334 VKPRRLGDPSYLSWNRNPGG 353
             VKPR+LGDPSYLSWNR+ GG
Sbjct:   329 VKPRQLGDPSYLSWNRSAGG 348

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

GO:0009543 "chloroplast thylakoid lumen" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0006865 "amino acid transport" evidence=RCA

TAIR|locus:2032780 AT1G16360 [Arabidopsis thaliana (taxid:3702)]

 Score = 1253 (446.1 bits), Expect = 1.2e-127, P = 1.2e-127
 Identities = 227/319 (71%), Positives = 267/319 (83%)

Query:    35 SKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPVA 94
             S+FTQQELPACKPILTPKWVILTFLV G+ F+P+G+  L AS+ V+EIVDRY+TDCIP++
Sbjct:    17 SRFTQQELPACKPILTPKWVILTFLVSGVVFIPLGVICLFASQGVIEIVDRYDTDCIPLS 76

Query:    95 NRTDKVAFIQSNASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRS 154
             +R +KV +IQ    K C R ITVTK MK PVYVYYQL+N+YQNHRRYVKSR D QL+   
Sbjct:    77 SRDNKVRYIQGLEDKRCNRTITVTKTMKNPVYVYYQLENYYQNHRRYVKSRQDGQLRSPK 136

Query:   155 KTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGIAWKSDRDHK 214
                ET  C PEDT   G+PIVPCGL+AWSLFNDTY F+RN ++L VNK  I+WKSDR+ K
Sbjct:   137 DEHETKSCAPEDTL-GGQPIVPCGLVAWSLFNDTYDFTRNNQKLPVNKKDISWKSDRESK 195

Query:   215 FGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEEND 274
             FGK VFP NFQ G+LIGG  L++ IPLS+QEDLIVWMRTAALPTFRKLYGKI+ DL+  D
Sbjct:   196 FGKNVFPKNFQKGSLIGGKSLDQDIPLSEQEDLIVWMRTAALPTFRKLYGKIDTDLQAGD 255

Query:   275 IIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYLV 334
              I V+L+NNYNTYSF+GKKKLVLSTTSWLGG+NDFLGIAYLTVG +C FLA+SF+++YL 
Sbjct:   256 TIKVLLQNNYNTYSFNGKKKLVLSTTSWLGGRNDFLGIAYLTVGSICLFLAVSFSVLYLA 315

Query:   335 KPRRLGDPSYLSWNRNPGG 353
             KPR+LGDPSYLSWNR+ GG
Sbjct:   316 KPRQLGDPSYLSWNRSAGG 334

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

TAIR|locus:2161453 AT5G46150 "AT5G46150" [Arabidopsis thaliana (taxid:3702)]

 Score = 1040 (371.2 bits), Expect = 4.6e-105, P = 4.6e-105
 Identities = 190/315 (60%), Positives = 246/315 (78%)

Query:    36 KFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPVAN 95
             +F QQ+LPACKP+LTP  VI  F+++G  F+PIG+ +L ASRD +EI+DRY+ +CIP   
Sbjct:    28 QFKQQKLPACKPVLTPISVITVFMLMGFVFIPIGLITLRASRDAIEIIDRYDVECIPEEY 87

Query:    96 RTDKVAFI-QSNASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRS 154
             RT+K+ +I  S+  K CTR + V K+MK P+++YYQLDN+YQNHRRYVKSR+D+QL    
Sbjct:    88 RTNKLLYITDSSIPKNCTRYLKVQKYMKAPIFIYYQLDNYYQNHRRYVKSRSDQQLLHGL 147

Query:   155 KTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGIAWKSDRDHK 214
             + S TS CEPE+++ +G PIVPCGLIAWS+FNDT+TFSR + +L V++N IAWKSDR+HK
Sbjct:   148 EYSHTSSCEPEESS-NGLPIVPCGLIAWSMFNDTFTFSRERTKLNVSRNNIAWKSDREHK 206

Query:   215 FGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEEND 274
             FGK V+P NFQNGTLIGGA L+  IPLS QED IVWMR AAL +FRKLYG+IE DLE   
Sbjct:   207 FGKNVYPINFQNGTLIGGAKLDPKIPLSDQEDFIVWMRAAALLSFRKLYGRIEEDLEPGK 266

Query:   275 IIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYLV 334
             +++V L NNYNTYSFSG+KKL+LST++WLGG+NDFLGI YL VG     +++ F +++L 
Sbjct:   267 VVEVNLMNNYNTYSFSGQKKLILSTSNWLGGRNDFLGITYLVVGSSSIVISIIFMLLHLK 326

Query:   335 KPRRLGDPSYLSWNR 349
              PR  GD S   WN+
Sbjct:   327 NPRPYGDNS---WNK 338

GO:0003674 "molecular_function" evidence=ND

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

DICTYBASE|DDB_G0276567 DDB_G0276567 "CDC50/LEM3 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
 Identities = 147/322 (45%), Positives = 190/322 (59%)

Query:    37 FTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPVANR 96
             F QQ L A +PILTP  VI+ F+V+GI F+PIG   + +S  V+E V RY+ +  P    
Sbjct:    16 FKQQRLKAWEPILTPGPVIIAFIVIGIVFIPIGAAIINSSNKVLEHVIRYDDN--PNCQL 73

Query:    97 TDKVAFIQSNASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKT 156
               K           CT   T+   M+ PVY+YY+LDNFYQNHRRYVKSRND+QL+    T
Sbjct:    74 GQK-----------CTINYTLPTEMESPVYLYYKLDNFYQNHRRYVKSRNDDQLRGIEVT 122

Query:   157 --SETSQCEPEDTTPDG-----KPIVPCGLIAWSLFNDTYTFSRNKRQL-TVNKNGIAWK 208
               S+   CEP  TT DG     K +VPCGLIA S+FND+ + +     L  + K GIAW+
Sbjct:   123 DFSKLKDCEPLITT-DGSEDVNKILVPCGLIANSVFNDSISLADASGNLINLTKKGIAWQ 181

Query:   209 SDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGKIEV 268
             SD D KF    +P   +NG  +G  + +      + ED IVWMRTAALP F+KLY     
Sbjct:   182 SDIDKKFKN--YP---ENG--VGVINFSNF----EDEDFIVWMRTAALPDFKKLYRIYHG 230

Query:   269 DLEE-NDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALS 327
                  +  I + ++N Y   SF GKK +VLSTTSW+GGKN FLG AY+ VG +CF   + 
Sbjct:   231 QNGPLSGTIQIRIDNKYPVASFDGKKYVVLSTTSWIGGKNPFLGYAYIIVGIICFVQGVV 290

Query:   328 FTIVYLVKPRRLGDPSYLSWNR 349
             F I + + PR LG P YL WN+
Sbjct:   291 FAIKHKISPRVLGSPKYLEWNK 312

GO:0016020 "membrane" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

ZFIN|ZDB-GENE-040704-26 tmem30aa "transmembrane protein 30Aa" [Danio rerio (taxid:7955)]

 Score = 331 (121.6 bits), Expect = 1.6e-53, Sum P(2) = 1.6e-53
 Identities = 79/188 (42%), Positives = 109/188 (57%)

Query:    37 FTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEI-VDRYETDCI-PVA 94
             F QQ LPA +PILT   V+  F ++G+ F+PIGI   + S ++ E  +D    D   P  
Sbjct:    37 FKQQRLPAWQPILTAGTVLPAFFMIGLIFIPIGIGLFVTSNNIKEFEIDYTGVDMSSPCY 96

Query:    95 NRTDKVAFIQSNASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLK--K 152
             N     ++  S +  TCT   T+ +  +  V++YY L NFYQNHRRYVKSR+D QL   K
Sbjct:    97 NCAQNYSW-NSTSVCTCTVPFTLDQPFESNVFMYYGLSNFYQNHRRYVKSRDDSQLNGDK 155

Query:   153 RSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDT---YTFSRNKRQLTVN--KNGIAW 207
              S  + + +CEP  T+ D KPI PCG IA SLFNDT   +    N  ++ ++  K GIAW
Sbjct:   156 SSLLNPSKECEPYRTS-DRKPIAPCGAIANSLFNDTLELFYIHPNGSKIGIHLVKTGIAW 214

Query:   208 KSDRDHKF 215
              +D+  KF
Sbjct:   215 WTDKHVKF 222

GO:0016020 "membrane" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-030131-5884 tmem30ab "transmembrane protein 30Ab" [Danio rerio (taxid:7955)]

 Score = 325 (119.5 bits), Expect = 1.6e-53, Sum P(2) = 1.6e-53
 Identities = 78/188 (41%), Positives = 107/188 (56%)

Query:    37 FTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEI-VDRYETDCI-PVA 94
             F QQ LPA +PILT   V+  F V+G+ F+PIGI   + S ++ E  +D   TD   P  
Sbjct:    36 FKQQRLPAWQPILTAGTVLPAFFVIGLIFIPIGIGLYVTSNNIKEFEIDYTGTDMSSPCF 95

Query:    95 NRTDKVAFIQSNASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLK--K 152
             N +   ++  +   K CT   ++ +  +  V++YY L NFYQNHRRYVKSR+D QL   +
Sbjct:    96 NCSQSFSWNSTTPCK-CTLSFSLDQPFESNVFMYYGLSNFYQNHRRYVKSRDDSQLNGDE 154

Query:   153 RSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDT---YTFSRN--KRQLTVNKNGIAW 207
             RS    + +CEP     D K I PCG IA S+FNDT   +    N  K Q+ + K GIAW
Sbjct:   155 RSLKEPSKECEPYRIN-DNKRIAPCGAIANSMFNDTLDLFYIDPNGTKTQIPMIKKGIAW 213

Query:   208 KSDRDHKF 215
              +D+  KF
Sbjct:   214 WTDKHVKF 221

GO:0016020 "membrane" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q17QL5 TMEM30A "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 323 (118.8 bits), Expect = 1.6e-53, Sum P(2) = 1.6e-53
 Identities = 78/188 (41%), Positives = 107/188 (56%)

Query:    37 FTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEI-VDRYETDCIPVAN 95
             F QQ LPA +PILT   V+ TF ++G+ F+PIGI   + S ++ EI +D   TD     N
Sbjct:    33 FKQQRLPAWQPILTAGTVLPTFFIIGLIFIPIGIGIFVTSNNIREIEIDYTGTDPSSPCN 92

Query:    96 RTDKVAFIQSNASK-TCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLK--K 152
             +      +  N +   CT   T+ +  +  V++YY L NFYQNHRRYVKSR+D QL    
Sbjct:    93 KC-----LSPNVTPCVCTINFTLEQSFEGNVFMYYGLSNFYQNHRRYVKSRDDGQLNGDP 147

Query:   153 RSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSR--NKRQLT---VNKNGIAW 207
              +  + + +CEP     D KPI PCG IA S+FNDT    +  N   LT   + K GIAW
Sbjct:   148 SALLNPSKECEPYRRNED-KPIAPCGAIANSMFNDTLELFQVGNASDLTPIPLKKKGIAW 206

Query:   208 KSDRDHKF 215
              +D++ KF
Sbjct:   207 WTDKNVKF 214

GO:0070863 "positive regulation of protein exit from endoplasmic reticulum" evidence=IEA

GO:0036010 "protein localization to endosome" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|E2R2Z8 TMEM30A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 317 (116.6 bits), Expect = 6.9e-53, Sum P(2) = 6.9e-53
 Identities = 78/188 (41%), Positives = 106/188 (56%)

Query:    37 FTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEI-VDRYETDCIPVAN 95
             F QQ LPA +PILT   V+ TF ++G+ F+PIGI   + S ++ EI +D   TD     N
Sbjct:    33 FKQQRLPAWQPILTAGTVLPTFFIIGLIFIPIGIGIFVTSNNIREIEIDYTGTDPSSPCN 92

Query:    96 RTDKVAFIQSNASKT-CTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRS 154
             +      +  N +   CT   T+ +  +  V++YY L NFYQNHRRYVKSR+D QL   S
Sbjct:    93 KC-----LSPNVTPCICTINFTLEQSFEGNVFMYYGLSNFYQNHRRYVKSRDDSQLNGDS 147

Query:   155 KT--SETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSR--NKRQLT---VNKNGIAW 207
                 + + +CEP     D KPI PCG IA S+FNDT       N+   T   + K GIAW
Sbjct:   148 GALLNPSKECEPYRRNED-KPIAPCGAIANSMFNDTLELFLVGNESYPTPIPLKKKGIAW 206

Query:   208 KSDRDHKF 215
              +D++ KF
Sbjct:   207 WTDKNVKF 214

GO:0070863 "positive regulation of protein exit from endoplasmic reticulum" evidence=IEA

GO:0036010 "protein localization to endosome" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016020 "membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LTW0	ALIS1_ARATH	No assigned EC number	0.7264	0.9265	0.9371	no	no
P53740	YN8S_YEAST	No assigned EC number	0.3445	0.8954	0.8066	yes	no
Q8L8W0	ALIS5_ARATH	No assigned EC number	0.7164	0.9237	0.9342	no	no
Q9SLK2	ALIS3_ARATH	No assigned EC number	0.7386	0.9265	0.9398	yes	no
Q9SA35	ALIS4_ARATH	No assigned EC number	0.7115	0.8983	0.9464	no	no
Q8BHG3	CC50B_MOUSE	No assigned EC number	0.3333	0.8418	0.8441	yes	no
Q3MIR4	CC50B_HUMAN	No assigned EC number	0.3372	0.8615	0.8689	yes	no
Q96WW4	IVN1_SCHPO	No assigned EC number	0.3623	0.8926	0.8517	yes	no
Q5F362	CC50A_CHICK	No assigned EC number	0.4138	0.8418	0.8010	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	354
pfam03381	275	pfam03381, CDC50, LEM3 (ligand-effect modulator 3)	1e-118
COG5035	372	COG5035, CDC50, Cell cycle control protein [Cell d	5e-83

>gnl|CDD|217523 pfam03381, CDC50, LEM3 (ligand-effect modulator 3) family / CDC50 family

 Score =  343 bits (883), Expect = e-118
 Identities = 138/284 (48%), Positives = 177/284 (62%), Gaps = 23/284 (8%)

Query: 73  LLASRDVVEIVDRYETDCIPVANRTDKVAFIQSNASKTCTRQITVTKHMKRPVYVYYQLD 132
           L+AS +V EI  RY+  C       +  A I S    TCT   T+ + MK PVY YYQL 
Sbjct: 2   LVASNNVQEIEIRYDDCCTAAPEIGESFAEIPS----TCTITFTIPEDMKGPVYFYYQLT 57

Query: 133 NFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDT-TPDGKPIVPCGLIAWSLFNDTYTF 191
           NFYQNHRRYVKSR+D+QL+ ++ + + + CEP  +   +GKPI PCGLIA S+FNDT++ 
Sbjct: 58  NFYQNHRRYVKSRSDDQLRGKAVSGDDNNCEPLRSNDYNGKPIAPCGLIANSMFNDTFSL 117

Query: 192 ---SRNKRQLTVNKNGIAWKSDRDHKFGKE-------VFPSNFQNGTLIGGAHLNESIP- 240
              +     +T++K GIAW SD++ KF          V P N++          + +IP 
Sbjct: 118 PLANNGTTNVTLDKKGIAWSSDKEKKFKNTKYNPSGTVPPPNWK-----PNYEDDHTIPD 172

Query: 241 LSKQEDLIVWMRTAALPTFRKLYGKIE-VDLEENDIIDVILENNYNTYSFSGKKKLVLST 299
               ED IVWMRTAALPTFRKLY +I+  DL       + +ENNY   SF+GKK +VLST
Sbjct: 173 NQTNEDFIVWMRTAALPTFRKLYRRIDATDLPAGTYT-IQIENNYPVSSFNGKKSIVLST 231

Query: 300 TSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYLVKPRRLGDPS 343
           TSW GGKN FLGIAYL VGG+CF L + F I +L KPR+LGD S
Sbjct: 232 TSWFGGKNPFLGIAYLVVGGICFLLGILFLIRHLFKPRKLGDHS 275

Members of this family have been predicted to contain transmembrane helices. The family member LEM3 is a ligand-effect modulator, mutation of which increases glucocorticoid receptor activity in response to dexamethasone and also confers increased activity on other intracellular receptors including the progesterone, oestrogen and mineralocorticoid receptors. LEM3 is thought to affect a downstream step in the glucocorticoid receptor pathway. Factors that modulate ligand responsiveness are likely to contribute to the context-specific actions of the glucocorticoid receptor in mammalian cells. The products of genes YNR048w, YNL323w and YCR094w (CDC50) show redundancy of function and are involved in regulation of transcription via CDC39. CDC39 (also known as NOT1) is normally a negative regulator of transcription either by affecting the general RNA polymerase II machinery or by altering chromatin structure. One function of CDC39 is to block activation of the mating response pathway in the absence of pheromone, and mutation causes arrest in G1 by activation of the pathway. It may be that the cold-sensitive arrest in G1 noticed in CDC50 mutants may be due to inactivation of CDC39. The effects of LEM3 on glucocorticoid receptor activity may also be due to effects on transcription via CDC39. Length = 275

>gnl|CDD|227368 COG5035, CDC50, Cell cycle control protein [Cell division and chromosome partitioning / Transcription / Signal transduction mechanisms]

 Score =  256 bits (655), Expect = 5e-83
 Identities = 136/365 (37%), Positives = 195/365 (53%), Gaps = 49/365 (13%)

Query: 25  PRRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVD 84
               S+RP  + F QQ L A +PIL+P+ V+    ++GI F P+G   L+AS  V E+  
Sbjct: 16  SLLKSRRPPNTAFRQQRLKAWQPILSPRTVLPLLFLIGIVFAPLGGGLLVASSSVQELTI 75

Query: 85  RYETDC----------IPVANRTD------------KVAFIQSNASKTCTRQITVTKHMK 122
            Y TDC          IP                  + +  + +  + C  + TV   MK
Sbjct: 76  DY-TDCMTLASDEFSDIPSEYIQFHFKKKVNVLPQWRFSTDEEDDFQKCQIRFTVPSDMK 134

Query: 123 RPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKTSET--SQCEPEDTTPDGKPIVPCGLI 180
           +PV++YY+L NFYQNHRRYVKS +++QL+  +  S+   S C+P     + K I PCGLI
Sbjct: 135 KPVFIYYRLTNFYQNHRRYVKSFDEDQLRGEALKSDDLKSNCKPLSYN-EDKIIYPCGLI 193

Query: 181 AWSLFNDTYTFSRNKRQLTVNKN----GIAWKSDRDHKFGK------EVFP-----SNFQ 225
           A S+FNDT++      + T N N    GIAW+SDR H++ K      ++ P       + 
Sbjct: 194 ANSMFNDTFSSLLTGIEDTSNYNLTTKGIAWESDR-HRYKKTKYNASDIVPPPNWAKMYP 252

Query: 226 NGTLIGGAHLNESIP-LSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILENNY 284
           +G      + +++IP LS  E+   WMRTAA P F KL  +   D+       + +  N+
Sbjct: 253 DG------YTDDNIPDLSTWEEFQNWMRTAAFPKFSKLAMRNVNDVLPPGTYQLNITLNF 306

Query: 285 NTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYLVKPRRLGDPSY 344
               F+G K +VL+T S +GGKN FLGI YL VGG+C  L L F I +L KPR++ D SY
Sbjct: 307 PVLEFNGTKSIVLTTNSVIGGKNYFLGIVYLIVGGICALLGLIFLIKWLFKPRKMADHSY 366

Query: 345 LSWNR 349
           L+WN 
Sbjct: 367 LNWNM 371

Length = 372

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	354
KOG2952	351	consensus Cell cycle control protein [Cell cycle c	100.0
COG5035	372	CDC50 Cell cycle control protein [Cell division an	100.0
PF03381	278	CDC50: LEM3 (ligand-effect modulator 3) family / C	100.0
PF01102	122	Glycophorin_A: Glycophorin A; InterPro: IPR001195	86.27

>KOG2952 consensus Cell cycle control protein [Cell cycle control, cell division, chromosome partitioning; Transcription; Signal transduction mechanisms]

Probab=100.00  E-value=4.6e-113  Score=818.64  Aligned_cols=330  Identities=55%  Similarity=0.978  Sum_probs=301.8

Q ss_pred             CCCCCCCCCCcCCCCCCCCcccccccCCcccccchhHHHHHHHHHHHHHHHHHHHhhhhcCCeEEEEEeCCCCCCCCCcc
Q 018560           17 AGSPDPPAPRRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPVANR   96 (354)
Q Consensus        17 ~~~~~~~~~~~~s~~p~~~~f~QQ~L~aw~p~ltp~~vi~~f~~igi~fi~iGi~l~~~s~~v~E~~i~Yd~~c~~~~~~   96 (354)
                      .+.+|-+...+++|||++++|+|||||||||+|||++|+++||++|++|++||++++++|++|.|++++|+ +|.+.+.+
T Consensus         8 ~~~~~~~~~~~~s~rP~~t~f~QQrLpA~qPilt~~~vlp~f~i~g~vFipiGv~l~~as~~v~Ei~i~YT-dc~~~~~~   86 (351)
T KOG2952|consen    8 DVIPDLKGNRKKSRRPKNTAFKQQRLPAWQPILTPRTVLPLFFIIGVVFLPIGVGLLFASSKVIEITIRYT-DCIPTGFR   86 (351)
T ss_pred             cccccccchhhhccCCccccchhccccccccccCcchHHHHHHHHHHHHHhhhhheeEeecceEEEEEecc-cCcccccc
Confidence            34566777788899999999999999999999999999999999999999999999999999999999995 78876655


Q ss_pred             CcceeeeecCC--CceeEEEEEecCCCCCceEEEEEecchhhhhhhhhhCCChhhhcCcCCC-CCCCCCCCcccCCCCCe
Q 018560           97 TDKVAFIQSNA--SKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKT-SETSQCEPEDTTPDGKP  173 (354)
Q Consensus        97 ~~~~~~~~~~~--~~~C~i~f~i~~~m~~pVyvYY~L~NFyQNHRrYv~S~s~~QL~G~~~~-~~~~~C~P~~~~~~g~~  173 (354)
                      +.+.++++...  .+.|+++|+||++|++|||+||+|+|||||||||++|||++||+|+... .+.++|.|++++.+|++
T Consensus        87 ~~~~~~~~~~~~~~~~C~~~f~vp~~~k~pVy~YY~L~nfyQNhRRYvkSr~d~QL~G~~~~~~~~~~C~Pl~~~~~~kp  166 (351)
T KOG2952|consen   87 TNPSEYIQGHFDQTKSCTITFTVPKDMKGPVYLYYELTNFYQNHRRYVKSRDDKQLRGEPSKELNVKSCAPLEYNEGGKP  166 (351)
T ss_pred             ccchhhhhcccCcccceEEEEEccccCCCCEEEEEehhHHHHHHHHHHhcccHHHhcCCCccccCccCCCcceecCCCce
Confidence            55555555332  4679999999999999999999999999999999999999999999753 34566999999767799


Q ss_pred             eecchhhhcccccceeecccCCc---ceeeeccccccCCccccccCCCCC-------CCCCCCCcccCCcccCCCCCCCC
Q 018560          174 IVPCGLIAWSLFNDTYTFSRNKR---QLTVNKNGIAWKSDRDHKFGKEVF-------PSNFQNGTLIGGAHLNESIPLSK  243 (354)
Q Consensus       174 i~PCGliA~S~FNDtF~l~~~~~---~i~~~~~gIaW~sD~~~kF~~~~~-------p~~w~~~~~~~~~~~~~~~~~~~  243 (354)
                      |+||||||||||||||++...+.   .++++++||||++|+ +||+++.+       |+||+++.+.|+ ..+++.++.+
T Consensus       167 i~PCGlIAnSlFNDTf~~~~~~~~~~~~~l~~kgIaW~sDk-~kf~~p~~n~~~~~pPpnW~k~~~~gg-~~d~n~pl~~  244 (351)
T KOG2952|consen  167 IYPCGLIANSLFNDTFELSLTNDGDSDYPLTTKGIAWESDK-HKFRKPIYNASGIVPPPNWQKGYPEGG-YTDDNIPLSE  244 (351)
T ss_pred             eeecchhcchhcccccchhcccCCCccceeccCCccchhhh-hhhcCCCCccccccCCccccccCCcCC-cCCCCCCchh
Confidence            99999999999999999976543   789999999999999 89998655       999999988887 6777777899


Q ss_pred             chhHHHHhhcCCCchhHHhhhccccc-CCCCCEEEEEEeeeecCcccCceEEEEEEeccccCcCccchhHHHHHHHHHHH
Q 018560          244 QEDLIVWMRTAALPTFRKLYGKIEVD-LEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCF  322 (354)
Q Consensus       244 ne~FivWMr~Aalp~FrKLYg~i~~~-L~~G~~y~v~I~nnypv~~F~G~K~iVLst~s~~GgkN~fLGi~yivvG~i~~  322 (354)
                      ||+||||||+||||+||||||+|+++ |++| +|+++|++||||+.|+|+|++||||+||+||||+||||+|||||++|+
T Consensus       245 nedfivWMRtAAlPtFrKLy~~i~~~gL~~G-~y~l~i~~Nypv~sf~G~K~~vlst~SwlGgkN~FLgI~YLvVG~ic~  323 (351)
T KOG2952|consen  245 NEDFIVWMRTAALPTFRKLYRIIESNGLPKG-TYQLNITNNYPVRSFNGKKKFVLSTTSWLGGKNPFLGIAYLVVGSICI  323 (351)
T ss_pred             hHHHHHHHHhcccchHHHHHhhhccCCCCCc-eEEEEEecccceeecCCceEEEEeeccccccCCccceehHHHHHHHHH
Confidence            99999999999999999999999986 9999 699999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCCCCCcccccCCC
Q 018560          323 FLALSFTIVYLVKPRRLGDPSYLSWNRN  350 (354)
Q Consensus       323 l~~l~fli~~~~~pr~lgd~~~L~w~~~  350 (354)
                      ++|++|++.|+++||++||+++|+|++.
T Consensus       324 ~l~~~f~~~~l~~~r~~~d~~~l~~~~~  351 (351)
T KOG2952|consen  324 LLGLIFLVIYLFKPRRLGDPSYLSWNRS  351 (351)
T ss_pred             HHHHHHHHHHhhcccccCCccccccccC
Confidence            9999999999999999999999999974

>COG5035 CDC50 Cell cycle control protein [Cell division and chromosome partitioning / Transcription / Signal transduction mechanisms]

Probab=100.00  E-value=3.1e-99  Score=709.74  Aligned_cols=322  Identities=41%  Similarity=0.707  Sum_probs=284.1

Q ss_pred             CCCcCCCCCCCCcccccccCCcccccchhHHHHHHHHHHHHHHHHHHHhhhhcCCeEEEEEeCCCCCCCCCc------cC
Q 018560           24 APRRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPVAN------RT   97 (354)
Q Consensus        24 ~~~~~s~~p~~~~f~QQ~L~aw~p~ltp~~vi~~f~~igi~fi~iGi~l~~~s~~v~E~~i~Yd~~c~~~~~------~~   97 (354)
                      ++..++|||.+++|+|||||||||++||+.|+++||++|++|.+||+.+++++.+|+|++|+|+ +|...+.      ++
T Consensus        15 ~~~~k~r~p~nt~F~QQrL~awqpilsp~~vLpL~flig~vf~plG~gl~~~~s~VqeltI~Yt-dc~t~as~~f~~iPs   93 (372)
T COG5035          15 PSLLKSRRPPNTAFRQQRLKAWQPILSPRTVLPLLFLIGIVFAPLGGGLLVASSSVQELTIDYT-DCMTLASDEFSDIPS   93 (372)
T ss_pred             cccccccCCchhhHHHhhccccccccCchHHHHHHHHHHHHHhhccceEEEEeeeeeeeeeccc-ccccccchhhhhCch
Confidence            3455789999999999999999999999999999999999999999999999999999999997 5875442      11


Q ss_pred             cceeeee--------------cC--CCceeEEEEEecCCCCCceEEEEEecchhhhhhhhhhCCChhhhcCcCCC--CCC
Q 018560           98 DKVAFIQ--------------SN--ASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKT--SET  159 (354)
Q Consensus        98 ~~~~~~~--------------~~--~~~~C~i~f~i~~~m~~pVyvYY~L~NFyQNHRrYv~S~s~~QL~G~~~~--~~~  159 (354)
                      +++.++-              ++  +...|++.|++|++||.|||+||+|+|||||||||++|.|.+||+|+...  ...
T Consensus        94 ~~~~~~f~~~~~~~pqW~~~~~~~~d~~~C~irf~vp~~~k~~vfiyyrl~nFyQNhrRY~~S~d~dQl~Ge~~~~~~l~  173 (372)
T COG5035          94 EYIQFHFKKKVNVLPQWRFSTDEEDDFQKCQIRFTVPSDMKKPVFIYYRLTNFYQNHRRYVKSFDEDQLRGEALKSDDLK  173 (372)
T ss_pred             hheeeeeecccccccceeecccccCCcceeEEEEEchhhcccceeeeehhHHHHHhhHHHHhccCHHHhcCccccccccc
Confidence            2222221              11  13579999999999999999999999999999999999999999999643  223


Q ss_pred             CCCCCcccCCCCCeeecchhhhcccccceeecccC----CcceeeeccccccCCccccccCCC-------CCCCCCCCCc
Q 018560          160 SQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRN----KRQLTVNKNGIAWKSDRDHKFGKE-------VFPSNFQNGT  228 (354)
Q Consensus       160 ~~C~P~~~~~~g~~i~PCGliA~S~FNDtF~l~~~----~~~i~~~~~gIaW~sD~~~kF~~~-------~~p~~w~~~~  228 (354)
                      +.|.|+++ .++|+||||||||||||||||+....    ++.+.++.+||||.+|+ ++|+++       ++||+|.+.+
T Consensus       174 ~nC~PL~~-nedK~~YPcGLIaNSmfNDtf~~~l~~i~Dts~Y~lttkgIaW~sDr-~rykktkYn~sdIvpPPnW~k~y  251 (372)
T COG5035         174 SNCKPLSY-NEDKIIYPCGLIANSMFNDTFSSLLTGIEDTSNYNLTTKGIAWESDR-HRYKKTKYNASDIVPPPNWAKMY  251 (372)
T ss_pred             ccCCcccc-cCCCeeecccccccccccccchhhccccccccccccccCCccchhhc-ccccCCCCChhhcCCCCchHhhC
Confidence            68999998 45699999999999999999987542    34688999999999999 588764       6799999988


Q ss_pred             ccCCcccCCCCCCCCchhHHHHhhcCCCchhHHhhhcccc-cCCCCCEEEEEEeeeecCcccCceEEEEEEeccccCcCc
Q 018560          229 LIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGKIEV-DLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKN  307 (354)
Q Consensus       229 ~~~~~~~~~~~~~~~ne~FivWMr~Aalp~FrKLYg~i~~-~L~~G~~y~v~I~nnypv~~F~G~K~iVLst~s~~GgkN  307 (354)
                      ++|+.+ ++-+++.++|.|+||||+||||+|+||++|.+. +|++| +|+++|+.||||..|+|+|+|||+|.|.+||||
T Consensus       252 pdGYtd-~NiPDls~wE~Fq~WMrtAafP~F~KLa~~N~~d~l~~G-~Y~lnI~l~fPv~~f~GtKsi~Ltt~SviGgkN  329 (372)
T COG5035         252 PDGYTD-DNIPDLSTWEEFQNWMRTAAFPKFSKLAMRNVNDVLPPG-TYQLNITLNFPVLEFNGTKSIVLTTNSVIGGKN  329 (372)
T ss_pred             CCCCCc-cCCCcchhHHHHHHHhhcccCchHHHHhcccccccCCCc-eEEEEEEeecceeecCCceEEEEEecccccCCC
Confidence            888653 223567899999999999999999999999865 69999 699999999999999999999999999999999


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCC
Q 018560          308 DFLGIAYLTVGGLCFFLALSFTIVYLVKPRRLGDPSYLSWNRN  350 (354)
Q Consensus       308 ~fLGi~yivvG~i~~l~~l~fli~~~~~pr~lgd~~~L~w~~~  350 (354)
                      +||||+|||||++|.++|++|++.++++||++||++||+|+++
T Consensus       330 ~fLGI~ylivg~ical~~~if~~~~~f~pR~~~Dh~yLnw~~~  372 (372)
T COG5035         330 YFLGIVYLIVGGICALLGLIFLIKWLFKPRKMADHSYLNWNME  372 (372)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHhhCCcccCCcccccccCC
Confidence            9999999999999999999999999999999999999999974

>PF03381 CDC50: LEM3 (ligand-effect modulator 3) family / CDC50 family; InterPro: IPR005045 Members of this family have no known function

Probab=100.00  E-value=2.4e-84  Score=620.77  Aligned_cols=262  Identities=52%  Similarity=0.865  Sum_probs=226.1

Q ss_pred             hhhhcCCeEEEEEeCCCCCCCCCccCcceeeeecCCCceeEEEEEecCCCCCceEEEEEecchhhhhhhhhhCCChhhhc
Q 018560           72 SLLASRDVVEIVDRYETDCIPVANRTDKVAFIQSNASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLK  151 (354)
Q Consensus        72 l~~~s~~v~E~~i~Yd~~c~~~~~~~~~~~~~~~~~~~~C~i~f~i~~~m~~pVyvYY~L~NFyQNHRrYv~S~s~~QL~  151 (354)
                      |++++++|+|++++||+.|......    ........++|.++|+||++|++||||||||+|||||||||++|||++||+
T Consensus         1 ll~~s~~v~E~~~~Yd~~~~~~~~~----~~~~~~~~~~c~v~f~i~~~~~~pVyvYY~L~nFYQNhr~y~~S~~~~QL~   76 (278)
T PF03381_consen    1 LLVASNSVVEIEIRYDDCCDCQNCY----INEFSPIPCTCSVTFNIPEDMKGPVYVYYELTNFYQNHRRYVKSRSDSQLK   76 (278)
T ss_pred             CEEEeCCEEEEEEECCCCCCCCCcc----ccccCCCCceEEEEEEcCccCCCCEEEEEEEehhhHHhHHHHhcCCHHHhC
Confidence            5788999999999999888653210    000011146899999999999999999999999999999999999999999


Q ss_pred             CcCCC-CCCCCCCCcccC--CCCCeeecchhhhcccccceeeccc----CCcceeeeccccccCCccccccCCC------
Q 018560          152 KRSKT-SETSQCEPEDTT--PDGKPIVPCGLIAWSLFNDTYTFSR----NKRQLTVNKNGIAWKSDRDHKFGKE------  218 (354)
Q Consensus       152 G~~~~-~~~~~C~P~~~~--~~g~~i~PCGliA~S~FNDtF~l~~----~~~~i~~~~~gIaW~sD~~~kF~~~------  218 (354)
                      |+... ++.++|+|+++.  .++++++||||||||||||||+|..    .++.++++++||+|++|++.+|+++      
T Consensus        77 G~~~~~~~~~~C~p~~~~~~~~~~~~~PCGliA~S~FNDtF~l~~~~~~~~~~~~~~~~gIaw~~d~~~~fk~~~~~~~~  156 (278)
T PF03381_consen   77 GKIVSKSDLSDCDPLRTNNENNGKIIYPCGLIANSMFNDTFSLYRRNSGNNENIPLDETGIAWSSDRESKFKNPHYNNSN  156 (278)
T ss_pred             CCccccCCCCCCCCceeccCCCCCEeecccHhHhhhccceEEeeecccCCCceeeeecccccCchHHHHhcCCCCCcccc
Confidence            99732 446799999984  4778999999999999999999973    3467899999999999999999873      


Q ss_pred             -CCCCCCCCCcccCCcccCCCCC-CCCchhHHHHhhcCCCchhHHhhhcc-cccCCCCCEEEEEEeeeecCcccCceEEE
Q 018560          219 -VFPSNFQNGTLIGGAHLNESIP-LSKQEDLIVWMRTAALPTFRKLYGKI-EVDLEENDIIDVILENNYNTYSFSGKKKL  295 (354)
Q Consensus       219 -~~p~~w~~~~~~~~~~~~~~~~-~~~ne~FivWMr~Aalp~FrKLYg~i-~~~L~~G~~y~v~I~nnypv~~F~G~K~i  295 (354)
                       ++|++|....     +.+...+ ..+|||||||||+||||+|||||||| +++|++|+ |+|+|+|||||+.|+|+|+|
T Consensus       157 ~~~~~~W~~~~-----~~~~~~p~~~~ne~fivWMr~a~lp~FrKLYg~i~~~~L~~G~-y~i~I~nnypv~~f~G~K~i  230 (278)
T PF03381_consen  157 TVPPPNWRPGY-----ENDTPWPDNSENEHFIVWMRPAALPTFRKLYGRIDNDDLPAGN-YTIDITNNYPVSSFGGKKSI  230 (278)
T ss_pred             ccCCCceeeec-----cCCCCCCcccccHHHHHHhccccCCCeeEeEeeeccCCCCCce-EEEEEEEeecccccCcEEEE
Confidence             3577774321     2222233 34699999999999999999999999 88999995 99999999999999999999


Q ss_pred             EEEeccccCcCccchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCc
Q 018560          296 VLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYLVKPRRLGDPS  343 (354)
Q Consensus       296 VLst~s~~GgkN~fLGi~yivvG~i~~l~~l~fli~~~~~pr~lgd~~  343 (354)
                      ||+|+||+||||+||||+|||+|+||+++|++|++.|+++||++||++
T Consensus       231 vlst~s~~Ggkn~~Lgi~ylvvg~i~~v~~i~~~~~~~~~~r~~gD~~  278 (278)
T PF03381_consen  231 VLSTTSWFGGKNYFLGIAYLVVGGICLVLAIIFLIIHYFKPRKLGDTS  278 (278)
T ss_pred             EEEeccccCccccHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            999999999999999999999999999999999999999999999985

They have predicted transmembrane helices.; GO: 0016020 membrane

>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane

Probab=86.27  E-value=0.66  Score=39.69  Aligned_cols=26  Identities=15%  Similarity=0.292  Sum_probs=18.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhcC
Q 018560          311 GIAYLTVGGLCFFLALSFTIVYLVKP  336 (354)
Q Consensus       311 Gi~yivvG~i~~l~~l~fli~~~~~p  336 (354)
                      .|+.||+|+++-++++++++.++++.
T Consensus        65 ~i~~Ii~gv~aGvIg~Illi~y~irR   90 (122)
T PF01102_consen   65 AIIGIIFGVMAGVIGIILLISYCIRR   90 (122)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceeehhHHHHHHHHHHHHHHHHHHHH
Confidence            36677778887777777777777653

Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	354
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.2 bits (93), Expect = 9e-04
 Identities = 44/304 (14%), Positives = 77/304 (25%), Gaps = 90/304 (29%)

Query: 16  AAGSPDPPAPRRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAF---VPIGITS 72
           A    D  A   + K     K T   + +   +L P      F  + + F     I    
Sbjct: 334 AESIRDGLATWDNWKHVNCDKLTTI-IESSLNVLEPAEYRKMFDRLSV-FPPSAHI---- 387

Query: 73  LLASRDVVEIV--DRYETDCIPVANRTDKVAFIQSNASKTCTRQITVTKHMKRPVYVYY- 129
                 ++ ++  D  ++D + V N                 +   V K  K        
Sbjct: 388 ---PTILLSLIWFDVIKSDVMVVVN--------------KLHKYSLVEKQPKESTISIPS 430

Query: 130 -------QLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAW 182
                  +L+N Y  HR  V   N    K           + +D  P             
Sbjct: 431 IYLELKVKLENEYALHRSIVDHYN--IPKTF---------DSDDLIPP------------ 467

Query: 183 SLFNDTYTFSRNKRQLTVNKNGIAWKSDRDHKFGKEVFPSNFQN-----------GTLIG 231
             + D Y +S     L           +   +    +F   F +            T   
Sbjct: 468 --YLDQYFYSHIGHHLK--------NIEHPERM--TLFRMVFLDFRFLEQKIRHDSTAWN 515

Query: 232 --GAHLNESIPLSKQEDLIV------WMRTAALPTFRKLYGKIEVDLEENDIIDVILENN 283
             G+ LN    L   +  I            A+  F     +  +  +  D++ + L   
Sbjct: 516 ASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAE 575

Query: 284 YNTY 287
               
Sbjct: 576 DEAI 579

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00