Citrus Sinensis ID: 018572
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 354 | ||||||
| 225435692 | 497 | PREDICTED: GPI mannosyltransferase 2 [Vi | 0.875 | 0.623 | 0.640 | 1e-115 | |
| 255573720 | 500 | conserved hypothetical protein [Ricinus | 0.926 | 0.656 | 0.626 | 1e-115 | |
| 224073180 | 483 | predicted protein [Populus trichocarpa] | 0.929 | 0.681 | 0.660 | 1e-113 | |
| 449462575 | 496 | PREDICTED: GPI mannosyltransferase 2-lik | 0.855 | 0.610 | 0.669 | 1e-112 | |
| 400131568 | 548 | T4.7 [Malus x robusta] | 0.861 | 0.556 | 0.658 | 1e-110 | |
| 297849556 | 494 | hypothetical protein ARALYDRAFT_471336 [ | 0.836 | 0.599 | 0.627 | 1e-109 | |
| 42561929 | 489 | phosphatidylinositol glycan, class V [Ar | 0.836 | 0.605 | 0.617 | 1e-108 | |
| 3157950 | 492 | Contains similarity to hypothetical prot | 0.844 | 0.607 | 0.607 | 1e-106 | |
| 356519786 | 488 | PREDICTED: GPI mannosyltransferase 2-lik | 0.844 | 0.612 | 0.596 | 4e-97 | |
| 357475203 | 486 | GPI mannosyltransferase [Medicago trunca | 0.822 | 0.598 | 0.590 | 4e-95 |
| >gi|225435692|ref|XP_002283435.1| PREDICTED: GPI mannosyltransferase 2 [Vitis vinifera] gi|297746434|emb|CBI16490.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/323 (64%), Positives = 255/323 (78%), Gaps = 13/323 (4%)
Query: 1 METLNFPHETQV---FKSAAVSRLLLLALIVLWRALLSPYDTSAPLNPNCLVDPHQQQHS 57
M T NF + K+A SRL LLALI+ WR+L PYDTSAPLNPNCL Q +
Sbjct: 1 MNTSNFQKSNHICIILKTAVCSRLFLLALIIFWRSLFEPYDTSAPLNPNCLSLESQPADT 60
Query: 58 ---PNSSIGSRIESSIVWDSVYFVRIAQCGYEYEQSYAFLPLLPAFTHLLSRSVLAPLIG 114
P IG+ IE SIVWD+VYFVRIAQCGYEYEQSYAFLPLLP LSR+V APLI
Sbjct: 61 VLWPK--IGAAIEGSIVWDAVYFVRIAQCGYEYEQSYAFLPLLPICISFLSRTVFAPLIP 118
Query: 115 VIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFYTSI 174
+IG+RAVLGL+GY+++N+AF+ AAVYFY+LSV+ILKD +AA AS+LFCFNPASIFY+SI
Sbjct: 119 LIGHRAVLGLSGYVLNNIAFVLAAVYFYKLSVIILKDKEAAFRASILFCFNPASIFYSSI 178
Query: 175 YSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQTMHQAYDALFL 234
YSESLYAL SVGG+Y+L+S + N++VLWLA+SG ARSNGVLNAGYFCFQTMH+AY+A+FL
Sbjct: 179 YSESLYALLSVGGVYHLISSSNNVAVLWLALSGSARSNGVLNAGYFCFQTMHEAYEAIFL 238
Query: 235 KKRHFLAMWILVCGALRCICIFAPFISFQVYGYFNMCLGRSPDEMRPWCKAKVPLLYNFI 294
KKR +L++ +L+ G LRC+CIF PF++FQ YGY+N+CLG PDEM PWCKA+VPL+YN++
Sbjct: 239 KKRAYLSVQVLLVGVLRCLCIFVPFVAFQAYGYYNICLGHFPDEMSPWCKARVPLVYNYL 298
Query: 295 QSHYCFFQCQGSGFLEVLPIQTV 317
QSHY G GFL ++ +
Sbjct: 299 QSHY-----WGVGFLRYFQLKQL 316
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255573720|ref|XP_002527781.1| conserved hypothetical protein [Ricinus communis] gi|223532816|gb|EEF34591.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|224073180|ref|XP_002304011.1| predicted protein [Populus trichocarpa] gi|222841443|gb|EEE78990.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|449462575|ref|XP_004149016.1| PREDICTED: GPI mannosyltransferase 2-like [Cucumis sativus] gi|449502191|ref|XP_004161569.1| PREDICTED: GPI mannosyltransferase 2-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|400131568|emb|CCH50968.1| T4.7 [Malus x robusta] | Back alignment and taxonomy information |
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| >gi|297849556|ref|XP_002892659.1| hypothetical protein ARALYDRAFT_471336 [Arabidopsis lyrata subsp. lyrata] gi|297338501|gb|EFH68918.1| hypothetical protein ARALYDRAFT_471336 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|42561929|ref|NP_172652.2| phosphatidylinositol glycan, class V [Arabidopsis thaliana] gi|46931244|gb|AAT06426.1| At1g11880 [Arabidopsis thaliana] gi|50897228|gb|AAT85753.1| At1g11880 [Arabidopsis thaliana] gi|332190687|gb|AEE28808.1| phosphatidylinositol glycan, class V [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|3157950|gb|AAC17633.1| Contains similarity to hypothetical protein C18b11.05 gb|Z50728 from S. pombe. EST gb|H76601 comes from this gene [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|356519786|ref|XP_003528550.1| PREDICTED: GPI mannosyltransferase 2-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|357475203|ref|XP_003607887.1| GPI mannosyltransferase [Medicago truncatula] gi|85719351|gb|ABC75356.1| Protein of unknown function DUF409 [Medicago truncatula] gi|355508942|gb|AES90084.1| GPI mannosyltransferase [Medicago truncatula] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 354 | ||||||
| TAIR|locus:2008970 | 489 | AT1G11880 [Arabidopsis thalian | 0.802 | 0.580 | 0.611 | 5.2e-97 | |
| UNIPROTKB|H9KYS4 | 512 | PIGV "Uncharacterized protein" | 0.556 | 0.384 | 0.311 | 2.4e-27 | |
| UNIPROTKB|F1PQ81 | 412 | PIGV "Uncharacterized protein" | 0.615 | 0.529 | 0.301 | 2.7e-27 | |
| UNIPROTKB|Q9NUD9 | 493 | PIGV "GPI mannosyltransferase | 0.581 | 0.417 | 0.309 | 3.8e-27 | |
| UNIPROTKB|F1STS1 | 493 | LOC100624784 "Uncharacterized | 0.598 | 0.430 | 0.298 | 4.9e-27 | |
| UNIPROTKB|I3LJM4 | 494 | LOC100624784 "Uncharacterized | 0.598 | 0.429 | 0.298 | 5e-27 | |
| MGI|MGI:2442480 | 493 | Pigv "phosphatidylinositol gly | 0.581 | 0.417 | 0.317 | 8.5e-27 | |
| UNIPROTKB|J9P6Y3 | 470 | PIGV "Uncharacterized protein" | 0.615 | 0.463 | 0.301 | 1e-26 | |
| UNIPROTKB|J9NWG9 | 493 | PIGV "Uncharacterized protein" | 0.615 | 0.442 | 0.301 | 1.5e-26 | |
| UNIPROTKB|J9P185 | 493 | PIGV "Uncharacterized protein" | 0.615 | 0.442 | 0.301 | 1.5e-26 |
| TAIR|locus:2008970 AT1G11880 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 964 (344.4 bits), Expect = 5.2e-97, P = 5.2e-97
Identities = 181/296 (61%), Positives = 233/296 (78%)
Query: 36 PYDTSAPLNPNCLVDPHQQQHSPN--SSIGSR-IESSIVWDSVYFVRIAQCGYEYEQSYA 92
PYDTSA LNP CL H++ P ++ SR +E+S+VWDSVYF+RI +CGYEYEQ+YA
Sbjct: 41 PYDTSAALNPPCLY--HKEDSFPFLVANAASRSLENSVVWDSVYFLRITECGYEYEQTYA 98
Query: 93 FLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKDP 152
FLPLLP F LLSR+V APL+ +IG RAV+ L+G+ VSN+AF+FAA+Y +R+SV+ILKD
Sbjct: 99 FLPLLPFFISLLSRTVFAPLVPLIGLRAVMVLSGFTVSNLAFIFAAIYLFRVSVIILKDT 158
Query: 153 DAALCASLLFCFNPASIFYTSIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSN 212
+A+ AS++FCFNPASIFY+SIYSESLYALFS+GG+Y+L+SG N+ VLW A+SGCARSN
Sbjct: 159 EASFRASIIFCFNPASIFYSSIYSESLYALFSIGGVYHLLSGTSNVGVLWFALSGCARSN 218
Query: 213 GVLNAGYFCFQTMHQAYDALFLKKRHFLAMWILVCGALRCICIFAPFISFQVYGYFNMCL 272
G+LNAGY CFQTMH+AY+AL+ K+R +LAM + + G LRCICI PF++FQ YGY+N+C
Sbjct: 219 GILNAGYICFQTMHRAYEALYQKRRAYLAMQVFIAGFLRCICICLPFVAFQAYGYYNICH 278
Query: 273 GRSPDEMRPWCKAKVPLLYNFIQSHYC------FFQC-QGSGFLEVLPIQTVAKLS 321
G + DE+RPWCK ++PLLYNFIQSHY +FQ Q FL PI ++A S
Sbjct: 279 GHTRDEVRPWCKGRIPLLYNFIQSHYWGVGFLKYFQFKQLPNFLLASPILSLAVCS 334
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| UNIPROTKB|H9KYS4 PIGV "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1PQ81 PIGV "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q9NUD9 PIGV "GPI mannosyltransferase 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1STS1 LOC100624784 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| UNIPROTKB|I3LJM4 LOC100624784 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| MGI|MGI:2442480 Pigv "phosphatidylinositol glycan anchor biosynthesis, class V" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|J9P6Y3 PIGV "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|J9NWG9 PIGV "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|J9P185 PIGV "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 354 | |||
| pfam04188 | 412 | pfam04188, Mannosyl_trans2, Mannosyltransferase (P | 5e-84 | |
| COG5542 | 420 | COG5542, COG5542, Predicted integral membrane prot | 2e-16 |
| >gnl|CDD|217951 pfam04188, Mannosyl_trans2, Mannosyltransferase (PIG-V)) | Back alignment and domain information |
|---|
Score = 260 bits (665), Expect = 5e-84
Identities = 108/288 (37%), Positives = 154/288 (53%), Gaps = 8/288 (2%)
Query: 11 QVFKSAAVSRLLLLALIVLWRALLSPYDTSAPLNPNCLVDPHQQQHSPNSSIGSRIESSI 70
++ A + R L L L +L P TS LNP C P N + + +
Sbjct: 4 ELTLYAVLCRSLQLLLTILTPIRQFPTSTSLALNPPCSNSPSLVNSYWNRYLWN---KLL 60
Query: 71 VWDSVYFVRIAQCGYEYEQSYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVS 130
WDSVYF++IA+ GY +E YAF PL P F LL +S PL+ ++G R+ + + + +S
Sbjct: 61 SWDSVYFLKIAENGYLFEHEYAFSPLWPFFISLLIKSNNDPLVHLLGLRSCIENSLFYLS 120
Query: 131 NVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFYTSIYSESLYALFSVGGLYY 190
+ F AA +L IL + SLLFC +PA+IF +SIYSESL+ALFS G++
Sbjct: 121 ILFFFLAAKALSQLIRQILFARTISFYTSLLFCLSPAAIFLSSIYSESLFALFSFVGIWS 180
Query: 191 LMSGALNISVLWLAISGCARSNGVLNAGYFCFQTMHQAYDALFLKKRHFLAMWILVCGAL 250
L G VLW A+S RSNG+ + G+ + + +L ++ + + L
Sbjct: 181 LECGIDISWVLWFALSTIMRSNGLASLGFSNCVLLGIYFISLIELTKNRKFVKAICFPFL 240
Query: 251 RCICIFAPFISFQVYGYFNMCLGRSPDEMRPWCKAKVPLLYNFIQSHY 298
C IF PF+ FQ YGY C GR PWCK+++PLLY++IQSHY
Sbjct: 241 SCSLIFLPFLYFQYYGYKTFCPGRG-----PWCKSQLPLLYSYIQSHY 283
|
This is a family of eukaryotic ER membrane proteins that are involved in the synthesis of glycosylphosphatidylinositol (GPI), a glycolipid that anchors many proteins to the eukaryotic cell surface. Proteins in this family are involved in transferring the second mannose in the biosynthetic pathway of GPI. Length = 412 |
| >gnl|CDD|227829 COG5542, COG5542, Predicted integral membrane protein [Function unknown] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 354 | |||
| PF04188 | 443 | Mannosyl_trans2: Mannosyltransferase (PIG-V)); Int | 100.0 | |
| KOG2647 | 444 | consensus Predicted Dolichyl-phosphate-mannose-pro | 100.0 | |
| COG5542 | 420 | Predicted integral membrane protein [Function unkn | 99.96 | |
| PF13231 | 159 | PMT_2: Dolichyl-phosphate-mannose-protein mannosyl | 98.81 | |
| TIGR03766 | 483 | conserved hypothetical integral membrane protein. | 98.59 | |
| PF02366 | 245 | PMT: Dolichyl-phosphate-mannose-protein mannosyltr | 98.25 | |
| TIGR03663 | 439 | conserved hypothetical protein TIGR03663. Members | 97.58 | |
| COG1807 | 535 | ArnT 4-amino-4-deoxy-L-arabinose transferase and r | 97.46 | |
| PLN02841 | 440 | GPI mannosyltransferase | 97.05 | |
| PRK13279 | 552 | arnT 4-amino-4-deoxy-L-arabinose transferase; Prov | 97.04 | |
| PF09594 | 241 | DUF2029: Protein of unknown function (DUF2029); In | 96.95 | |
| PF03901 | 418 | Glyco_transf_22: Alg9-like mannosyltransferase fam | 96.84 | |
| PF09852 | 449 | DUF2079: Predicted membrane protein (DUF2079); Int | 96.82 | |
| COG1287 | 773 | Uncharacterized membrane protein, required for N-l | 96.66 | |
| PF02516 | 483 | STT3: Oligosaccharyl transferase STT3 subunit; Int | 96.27 | |
| PLN02816 | 546 | mannosyltransferase | 95.63 | |
| PF10131 | 616 | PTPS_related: 6-pyruvoyl-tetrahydropterin synthase | 95.54 | |
| PF06728 | 382 | PIG-U: GPI transamidase subunit PIG-U; InterPro: I | 95.5 | |
| PF11028 | 178 | DUF2723: Protein of unknown function (DUF2723); In | 95.19 | |
| KOG3359 | 723 | consensus Dolichyl-phosphate-mannose:protein O-man | 95.14 | |
| TIGR03459 | 470 | crt_membr carotene biosynthesis associated membran | 94.83 | |
| COG1928 | 699 | PMT1 Dolichyl-phosphate-mannose--protein O-mannosy | 94.68 | |
| KOG3893 | 405 | consensus Mannosyltransferase [Carbohydrate transp | 94.25 | |
| COG3463 | 458 | Predicted membrane protein [Function unknown] | 93.13 | |
| PF04922 | 379 | DIE2_ALG10: DIE2/ALG10 family; InterPro: IPR007006 | 92.41 | |
| PF03155 | 469 | Alg6_Alg8: ALG6, ALG8 glycosyltransferase family; | 91.79 | |
| COG4346 | 438 | Predicted membrane-bound dolichyl-phosphate-mannos | 91.27 | |
| PF05007 | 259 | Mannosyl_trans: Mannosyltransferase (PIG-M); Inter | 88.64 | |
| COG5305 | 552 | Predicted membrane protein [Function unknown] | 85.11 | |
| PF14897 | 330 | EpsG: EpsG family | 80.86 | |
| PF05208 | 368 | ALG3: ALG3 protein; InterPro: IPR007873 The format | 80.35 |
| >PF04188 Mannosyl_trans2: Mannosyltransferase (PIG-V)); InterPro: IPR007315 This is a family of eukaryotic ER membrane proteins that are involved in the synthesis of glycosylphosphatidylinositol (GPI), a glycolipid that anchors many proteins to the eukaryotic cell surface | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-70 Score=555.73 Aligned_cols=312 Identities=39% Similarity=0.669 Sum_probs=267.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCCCCCCCCCCCCCCCCCCchhhhhhccccccHHHHHHHhhcccCccc
Q 018572 10 TQVFKSAAVSRLLLLALIVLWRALLSPYDTSAPLNPNCLVDPHQQQHSPNSSIGSRIESSIVWDSVYFVRIAQCGYEYEQ 89 (354)
Q Consensus 10 ~~vl~~~l~sRl~~lll~~~~~~~~p~~DtS~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~WDa~~F~~IA~~GY~~e~ 89 (354)
++|++.++++|+++++++++.+....|+|++..+.++..+.+. ...++..++.++++.||||+||++||+|||++||
T Consensus 2 ~~~~~~~~~~r~l~lll~~l~~~~~~~~~t~~~l~~~~~~~~~---~~~~~~~~~~l~~l~rWDa~~F~~IA~~GY~~E~ 78 (443)
T PF04188_consen 2 KGVVKFFVLSRILQLLLQILFPGLLFDTSTSLLLDPPCSSAPS---SLIDSFVNRLLWGLVRWDAVYFLRIAEHGYSYEH 78 (443)
T ss_pred CcccccchHHHHHHHHHHHHHhCcCCCCChHhhcCCCcccCCC---cchHhHHHHHHhcccchhHHHHHHHHHhCCCccc
Confidence 5688999999999999999998666667777767666531221 1123456778888999999999999999999999
Q ss_pred cccccccHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHcchhH
Q 018572 90 SYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASI 169 (354)
Q Consensus 90 ~~AFfPl~P~lvr~l~~~~~~~l~~~~~~~~~~~~ag~lvs~i~~~~a~~~Ly~L~~~~~~~~~~A~~aall~~~~Pasi 169 (354)
+|||||+||.++|.++.....++.+.++.......+|+++||+++.++++.+|+++++.++|++.|..++++++++|+++
T Consensus 79 ~~AFfPl~P~lvr~~~~~~~~~l~~~l~~~~~l~~~~~~vs~~~~~la~~~L~~l~~~~~~~~~~a~~a~ll~~~~Pasi 158 (443)
T PF04188_consen 79 EWAFFPLYPLLVRLLSKSLLSPLYGLLSVGSALLNSGILVSNVAFLLAAVALYRLTRRVFKSRKLALLAALLFIFSPASI 158 (443)
T ss_pred cccccCcHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHccHHH
Confidence 99999999999999995544444444444455667899999999999999999999999999999999999999999999
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Q 018572 170 FYTSIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQTMHQAYDALFLKKRHFLAMWILVCGA 249 (354)
Q Consensus 170 f~sa~YtEslF~~ls~~gl~~~~~~~~~~A~l~~~lA~~~RsnGil~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 249 (354)
|++++||||+|++++++|++.+++++++.|++++++|+++||||+++++++.++.++..+....++++..+.++.++..+
T Consensus 159 F~sa~YsEslf~~lsf~gl~~~~~~~~~~a~~~~~la~~~RsnGll~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~ 238 (443)
T PF04188_consen 159 FLSAPYSESLFALLSFAGLYLLERGRWWLAGLLFALATLTRSNGLLLAGFFAYELLGIYYLDLRQLRRQRRLVRALISAI 238 (443)
T ss_pred HhhcCccHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999988876643333334444567777788
Q ss_pred HhhHHhhhhHHHHHHHhhhhccCCCCCCCCCCcccCCCCchhHHHHhhcccccccccceeeccccCCchhhhhhhcccCc
Q 018572 250 LRCICIFAPFISFQVYGYFNMCLGRSPDEMRPWCKAKVPLLYNFIQSHYCFFQCQGSGFLEVLPIQTVAKLSSCVTNVNP 329 (354)
Q Consensus 250 l~~~~v~~Pf~~~q~y~Y~~fC~~~~~~~~~pWC~~~~P~iYs~VQ~~Y~~~~~WnvGFl~Y~~~~qiPn~~~~~~~~~~ 329 (354)
++++++++|++++|+|+|.+||++++.++.+|||++++|++|+|||+|| ||||||||||+||||||++|+-.+-.
T Consensus 239 l~~~~i~~pf~~~q~~~y~~fC~~~~~~~~~~WC~~~~P~~Ys~vQ~~Y-----WnvGfl~Yw~~~niPnFlla~P~~~l 313 (443)
T PF04188_consen 239 LSGLLIFLPFVLFQYYAYYRFCPPRSFGDEPPWCNNTIPSIYSFVQSHY-----WNVGFLRYWTLKNIPNFLLALPMLLL 313 (443)
T ss_pred hhhHHHHHHHHHHHHHHHhhcCCCCCCCCCchhhhccCccchHHHHHHH-----HccchHHhccccccchHHHHHHHHHH
Confidence 8899999999999999999999987653447999999999999999999 99999999999999999988765543
|
Proteins in this family are involved in transferring the second mannose in the biosynthetic pathway of GPI [], [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane |
| >KOG2647 consensus Predicted Dolichyl-phosphate-mannose-protein mannosyltransferase [General function prediction only] | Back alignment and domain information |
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| >COG5542 Predicted integral membrane protein [Function unknown] | Back alignment and domain information |
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| >PF13231 PMT_2: Dolichyl-phosphate-mannose-protein mannosyltransferase | Back alignment and domain information |
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| >TIGR03766 conserved hypothetical integral membrane protein | Back alignment and domain information |
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| >PF02366 PMT: Dolichyl-phosphate-mannose-protein mannosyltransferase ; InterPro: IPR003342 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
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| >TIGR03663 conserved hypothetical protein TIGR03663 | Back alignment and domain information |
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| >COG1807 ArnT 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
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| >PLN02841 GPI mannosyltransferase | Back alignment and domain information |
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| >PRK13279 arnT 4-amino-4-deoxy-L-arabinose transferase; Provisional | Back alignment and domain information |
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| >PF09594 DUF2029: Protein of unknown function (DUF2029); InterPro: IPR018584 This is a putative transmembrane protein from prokaryotes | Back alignment and domain information |
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| >PF03901 Glyco_transf_22: Alg9-like mannosyltransferase family; InterPro: IPR005599 Members of this family are glycosylphosphatidylinositol mannosyltransferase enzymes 2 | Back alignment and domain information |
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| >PF09852 DUF2079: Predicted membrane protein (DUF2079); InterPro: IPR018650 This entry is represented by Sulfolobus virus STSV1, Orf64 | Back alignment and domain information |
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| >COG1287 Uncharacterized membrane protein, required for N-linked glycosylation [General function prediction only] | Back alignment and domain information |
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| >PF02516 STT3: Oligosaccharyl transferase STT3 subunit; InterPro: IPR003674 N-linked glycosylation is a ubiquitous protein modification, and is essential for viability in eukaryotic cells | Back alignment and domain information |
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| >PLN02816 mannosyltransferase | Back alignment and domain information |
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| >PF10131 PTPS_related: 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein; InterPro: IPR018776 This entry is found in various bacterial and archaeal hypothetical membrane proteins, as well as in tetratricopeptide TPR_2 repeat protein | Back alignment and domain information |
|---|
| >PF06728 PIG-U: GPI transamidase subunit PIG-U; InterPro: IPR009600 Many eukaryotic proteins are anchored to the cell surface via glycosylphosphatidylinositol (GPI), which is posttranslationally attached to the C terminus by GPI transamidase | Back alignment and domain information |
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| >PF11028 DUF2723: Protein of unknown function (DUF2723); InterPro: IPR021280 This family is conserved in bacteria | Back alignment and domain information |
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| >KOG3359 consensus Dolichyl-phosphate-mannose:protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
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| >TIGR03459 crt_membr carotene biosynthesis associated membrane protein | Back alignment and domain information |
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| >COG1928 PMT1 Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
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| >KOG3893 consensus Mannosyltransferase [Carbohydrate transport and metabolism] | Back alignment and domain information |
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| >COG3463 Predicted membrane protein [Function unknown] | Back alignment and domain information |
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| >PF04922 DIE2_ALG10: DIE2/ALG10 family; InterPro: IPR007006 Members of this entry are glycosyltransferases, belonging to the ALG10 family | Back alignment and domain information |
|---|
| >PF03155 Alg6_Alg8: ALG6, ALG8 glycosyltransferase family; InterPro: IPR004856 N-linked (asparagine-linked) glycosylation of proteins is mediated by a highly conserved pathway in eukaryotes, in which a lipid (dolichol phosphate)-linked oligosaccharide is assembled at the endoplasmic reticulum membrane prior to the transfer of the oligosaccharide moiety to the target asparagine residues | Back alignment and domain information |
|---|
| >COG4346 Predicted membrane-bound dolichyl-phosphate-mannose-protein mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
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| >PF05007 Mannosyl_trans: Mannosyltransferase (PIG-M); InterPro: IPR007704 PIG-M has a DXD motif | Back alignment and domain information |
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| >COG5305 Predicted membrane protein [Function unknown] | Back alignment and domain information |
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| >PF14897 EpsG: EpsG family | Back alignment and domain information |
|---|
| >PF05208 ALG3: ALG3 protein; InterPro: IPR007873 The formation of N-glycosidic linkages of glycoproteins involves the ordered assembly of the common Glc3Man9GlcNAc2 core-oligosaccharide on the lipid carrier dolichyl pyrophosphate | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 354 | |||
| 3rce_A | 724 | Oligosaccharide transferase to N-glycosylate PROT; | 96.29 |
| >3rce_A Oligosaccharide transferase to N-glycosylate PROT; oligosaccharyltransferase, membrane protein, helical bundle, glycosylation, acceptor peptide, plasma membrane; HET: PPN; 3.40A {Campylobacter lari} | Back alignment and structure |
|---|
Probab=96.29 E-value=0.075 Score=56.47 Aligned_cols=134 Identities=14% Similarity=-0.004 Sum_probs=90.6
Q ss_pred cccccHHHHHHHhhc---ccCcc-ccccccccHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 018572 69 SIVWDSVYFVRIAQC---GYEYE-QSYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRL 144 (354)
Q Consensus 69 l~~WDa~~F~~IA~~---GY~~e-~~~AFfPl~P~lvr~l~~~~~~~l~~~~~~~~~~~~ag~lvs~i~~~~a~~~Ly~L 144 (354)
+..=|+-|+.+-|++ |...+ ..-.+-|+++.++..++..++ . ....+++.+..+...++++..|.+
T Consensus 52 ~~~~D~yy~~r~ar~~l~~~~~p~~~~p~g~~~~~l~a~l~~i~g--~--------sl~~v~~~lp~ifg~L~vi~~yll 121 (724)
T 3rce_A 52 ITTNDGYAFAEGARDMIAGFHQPNDLSYFGSSLSTLTYWLYSILP--F--------SFESIILYMSTFFASLIVVPIILI 121 (724)
T ss_dssp CSCHHHHHHHHHHHHHHHSCCCTTSCCCTTCHHHHHHHHHHHSCS--S--------CHHHHHHHHHHHHGGGGHHHHHHH
T ss_pred eccCCHHHHHHHHHHHHhcCCCCCCCCCCcchHHHHHHHHHHHcC--C--------CHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356799999988763 43322 123456788888888877642 1 134566777778888889999999
Q ss_pred HHHHhCChhHHHHHHHHHHHcchhHHHhh-h--chHHHHHHHHHHHHHHH---Hhcc----hHHHHHHHHHHHhhcchh
Q 018572 145 SVMILKDPDAALCASLLFCFNPASIFYTS-I--YSESLYALFSVGGLYYL---MSGA----LNISVLWLAISGCARSNG 213 (354)
Q Consensus 145 ~~~~~~~~~~A~~aall~~~~Pasif~sa-~--YtEslF~~ls~~gl~~~---~~~~----~~~A~l~~~lA~~~RsnG 213 (354)
++++. +++.+..|+++.++.|+-+.=|. + -+|++..++...+++++ .+++ ..++++..++...+-..|
T Consensus 122 ~~el~-~~~aGl~AAll~ai~P~~i~RS~aG~~D~e~l~i~~~ll~~~~~i~alk~~~~~~~~lagl~~~ly~~~~~gg 199 (724)
T 3rce_A 122 AREYK-LTTYGFIAALLGSIANSYYNRTMSGYYDTDMLVLVLPMLILLTFIRLTINKDIFTLLLSPIFIMIYLWWYPSS 199 (724)
T ss_dssp HHHTT-CHHHHHHHHHHHTTSHHHHHTSSTTCCSGGGGTTHHHHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHSCGGG
T ss_pred HHHHc-CchHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcch
Confidence 98876 68899999999999999654443 3 36665555444444444 3322 135677777777888877
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00