Citrus Sinensis ID: 018668
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 352 | ||||||
| 255587523 | 350 | conserved hypothetical protein [Ricinus | 0.994 | 1.0 | 0.784 | 1e-147 | |
| 224100821 | 394 | predicted protein [Populus trichocarpa] | 0.982 | 0.878 | 0.755 | 1e-142 | |
| 224109728 | 351 | predicted protein [Populus trichocarpa] | 0.994 | 0.997 | 0.750 | 1e-139 | |
| 225449106 | 358 | PREDICTED: uncharacterized protein LOC10 | 0.994 | 0.977 | 0.727 | 1e-136 | |
| 147863867 | 584 | hypothetical protein VITISV_005903 [Viti | 0.974 | 0.587 | 0.738 | 1e-135 | |
| 297803618 | 344 | hypothetical protein ARALYDRAFT_492335 [ | 0.928 | 0.950 | 0.687 | 1e-128 | |
| 449452110 | 350 | PREDICTED: uncharacterized protein LOC10 | 0.991 | 0.997 | 0.722 | 1e-126 | |
| 15234866 | 344 | uncharacterized protein [Arabidopsis tha | 0.928 | 0.950 | 0.687 | 1e-121 | |
| 357443353 | 355 | hypothetical protein MTR_1g095600 [Medic | 0.971 | 0.963 | 0.701 | 1e-121 | |
| 217072270 | 355 | unknown [Medicago truncatula] | 0.971 | 0.963 | 0.701 | 1e-121 |
| >gi|255587523|ref|XP_002534301.1| conserved hypothetical protein [Ricinus communis] gi|223525545|gb|EEF28083.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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Score = 526 bits (1354), Expect = e-147, Method: Compositional matrix adjust.
Identities = 276/352 (78%), Positives = 305/352 (86%), Gaps = 2/352 (0%)
Query: 1 MGCFFRGLNDESGASQLNILRCPFLRNINEPTNFSFASSLPFPMPVRAAKGPIFEDGPNF 60
M FFRG N+E SQ +ILRCPFLRNINEPTNFSF+SSLPFPMPVR+ KGPIFEDGPNF
Sbjct: 1 MDFFFRGQNEEPAPSQNDILRCPFLRNINEPTNFSFSSSLPFPMPVRSGKGPIFEDGPNF 60
Query: 61 DMAFRLFHGNDGVVPLSERSFVRPDVSEPELKAPQFNPLAAKAATISLSSFGPGGPFSFD 120
DMAFRLFHG DGVVPLSERS++ + + P+FNPLAAKAATISLSSFGPGGPFSFD
Sbjct: 61 DMAFRLFHGRDGVVPLSERSYISSEKEGRQPTLPEFNPLAAKAATISLSSFGPGGPFSFD 120
Query: 121 SFSDKWKNQKKKPSKPSKKESSSKGGDSNHEAMSNEWLQTGNCPIAKSYRAVSGVLPLVA 180
SFS KWKN+KK SKPSKKE SSKGG SNHEA+ NEWLQ+GNCPIAKSYRAVSGVLPLVA
Sbjct: 121 SFSKKWKNEKKN-SKPSKKEPSSKGGQSNHEALGNEWLQSGNCPIAKSYRAVSGVLPLVA 179
Query: 181 KVFQPPPGMKYKCPPVVVAARAAIARTAFAKSLRPQPLPAKVLVIGMLGMAANVPLGIWR 240
KVFQPPPG+ Y+CPPVVVAARAAIARTAFAK+LRPQPLP+K+LVIGMLGMAANVPLGIWR
Sbjct: 180 KVFQPPPGVNYRCPPVVVAARAAIARTAFAKNLRPQPLPSKILVIGMLGMAANVPLGIWR 239
Query: 241 EHTEKFSVSWIVAVHAAVPFIAMMRKSVLMPKSAMAFTIAASVLGQVIGSRAERYRMKAV 300
EHT+KFS SW AVHAAVPFIAM+RKSVLMPKSAMAFTIAASVLGQVIGSRAERYR+KA
Sbjct: 240 EHTKKFSASWFAAVHAAVPFIAMLRKSVLMPKSAMAFTIAASVLGQVIGSRAERYRLKAA 299
Query: 301 TEKSVTLKEKSVGSASQLQVVAVNGGHCAEPAKWDSVSLQVAKSSSSADVFC 352
K ++L E SV ++S+ Q VAV G C + K+ + SLQV +SSSADVFC
Sbjct: 300 AAKKMSLAETSVDASSEFQAVAVKGRCCGDFVKYPA-SLQVTGTSSSADVFC 350
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224100821|ref|XP_002312026.1| predicted protein [Populus trichocarpa] gi|222851846|gb|EEE89393.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|224109728|ref|XP_002315291.1| predicted protein [Populus trichocarpa] gi|222864331|gb|EEF01462.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|225449106|ref|XP_002276752.1| PREDICTED: uncharacterized protein LOC100259846 [Vitis vinifera] gi|296086048|emb|CBI31489.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|147863867|emb|CAN81117.1| hypothetical protein VITISV_005903 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|297803618|ref|XP_002869693.1| hypothetical protein ARALYDRAFT_492335 [Arabidopsis lyrata subsp. lyrata] gi|297315529|gb|EFH45952.1| hypothetical protein ARALYDRAFT_492335 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|449452110|ref|XP_004143803.1| PREDICTED: uncharacterized protein LOC101212152 [Cucumis sativus] gi|449485924|ref|XP_004157312.1| PREDICTED: uncharacterized LOC101212152 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|15234866|ref|NP_194233.1| uncharacterized protein [Arabidopsis thaliana] gi|42573033|ref|NP_974613.1| uncharacterized protein [Arabidopsis thaliana] gi|4455246|emb|CAB36745.1| putative protein [Arabidopsis thaliana] gi|7269353|emb|CAB79412.1| putative protein [Arabidopsis thaliana] gi|21553767|gb|AAM62860.1| unknown [Arabidopsis thaliana] gi|89000969|gb|ABD59074.1| At4g25030 [Arabidopsis thaliana] gi|110736875|dbj|BAF00395.1| hypothetical protein [Arabidopsis thaliana] gi|222424032|dbj|BAH19977.1| AT4G25030 [Arabidopsis thaliana] gi|332659593|gb|AEE84993.1| uncharacterized protein [Arabidopsis thaliana] gi|332659594|gb|AEE84994.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|357443353|ref|XP_003591954.1| hypothetical protein MTR_1g095600 [Medicago truncatula] gi|358349056|ref|XP_003638556.1| hypothetical protein MTR_136s0028 [Medicago truncatula] gi|355481002|gb|AES62205.1| hypothetical protein MTR_1g095600 [Medicago truncatula] gi|355504491|gb|AES85694.1| hypothetical protein MTR_136s0028 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|217072270|gb|ACJ84495.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 352 | ||||||
| TAIR|locus:2117293 | 344 | AT4G25030 "AT4G25030" [Arabido | 0.880 | 0.901 | 0.605 | 1.1e-96 | |
| TAIR|locus:2163563 | 342 | AT5G45410 "AT5G45410" [Arabido | 0.508 | 0.523 | 0.614 | 5.7e-86 | |
| UNIPROTKB|Q74FH0 | 85 | GSU0639 "Uncharacterized prote | 0.198 | 0.823 | 0.3 | 1.8e-05 | |
| TIGR_CMR|GSU_0639 | 85 | GSU_0639 "hypothetical protein | 0.198 | 0.823 | 0.3 | 1.8e-05 |
| TAIR|locus:2117293 AT4G25030 "AT4G25030" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 961 (343.3 bits), Expect = 1.1e-96, P = 1.1e-96
Identities = 198/327 (60%), Positives = 225/327 (68%)
Query: 14 ASQLNILRCPFLRNINEPTNFSFASSLPFPMPVRAAKGPIFEDGPNFDMAFRLFHGNDGV 73
ASQLNILRCPFLRNINEPTN SF+SSLPFP+P RA KGPIFEDGPNFD AFRLFHG DGV
Sbjct: 11 ASQLNILRCPFLRNINEPTNLSFSSSLPFPIPARAGKGPIFEDGPNFDTAFRLFHGQDGV 70
Query: 74 VPLSERSFVRPDVSEPELKAPQFNPLAAKAATISLXXXXXXXXXXXXXXXXXXXXXXXXX 133
VPLS+ + R + +P P F+PLAAKAATISL
Sbjct: 71 VPLSDTA--RTEAQKP---VPVFHPLAAKAATISLSSFGSGGPFGFDAFSDMFKNQKKKS 125
Query: 134 XXXXXXXXXXXXXXXXHEAMSNEWLQTGNCPIAKSYRAVSGVLPLVAKVFQPPPGMKYKC 193
HEAM +EWL+TGNCPIAKSYRAVSGV PLVAK+ QPPPGMK+KC
Sbjct: 126 DSSKNKGGN-------HEAMGDEWLKTGNCPIAKSYRAVSGVAPLVAKILQPPPGMKFKC 178
Query: 194 PPXXXXXXXXXXXXXXXKSLRPQPLPAKVLVIGMLGMAANVPLGIWREHTEKFSVSWIVA 253
P K+LRPQPLPAKVLVIGMLGMA NVPLG+WREHTEKFS SW +A
Sbjct: 179 PQAIVTARAAISKTPFAKNLRPQPLPAKVLVIGMLGMALNVPLGVWREHTEKFSASWFIA 238
Query: 254 VHAAVPFIAMMRKSVLMPKSAMAFTIAASVLGQVIGSRAERYRMKAVTEKSVTLKEKSVG 313
+HAAVPFI ++RKSVLMPK+AM FTIAASVLGQVIGSRAER R+K+V EK +TL+ +
Sbjct: 239 LHAAVPFIGILRKSVLMPKTAMVFTIAASVLGQVIGSRAERRRLKSVAEKKLTLEVPNPS 298
Query: 314 S--ASQLQVVAVNG-GHCAEPA--KWD 335
S A Q+Q V+ G C + KW+
Sbjct: 299 SVEADQMQFAGVSSDGRCGDKVVMKWN 325
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| TAIR|locus:2163563 AT5G45410 "AT5G45410" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q74FH0 GSU0639 "Uncharacterized protein" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
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| TIGR_CMR|GSU_0639 GSU_0639 "hypothetical protein" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| estExt_fgenesh4_pg.C_LG_VIII0329 | hypothetical protein (394 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
No hit with probability above 80.00
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 352 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-08 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
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Score = 54.9 bits (131), Expect = 2e-08
Identities = 44/283 (15%), Positives = 88/283 (31%), Gaps = 78/283 (27%)
Query: 59 NFDMAFRLFHGNDGVVPLSERSFVR-------PD-----VSEPE----LKAPQ------- 95
+F+ + ++ + E +FV D +S+ E + +
Sbjct: 8 DFETG-EHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLR 66
Query: 96 -FNPLAAKAATISLSSFGPGGPFSFDSFSDKWKNQKKKPSKPSKKESSSKGGDSNHEAMS 154
F L +K + ++ K ++++PS ++ +
Sbjct: 67 LFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQR---------- 116
Query: 155 NEWLQTGNCPIAKSYRAVSGVLPLVAKVFQPPPGMKYKCPPVVVAARAAIARTAFAKSLR 214
+ L N AK V + P + R A+ LR
Sbjct: 117 -DRLYNDNQVFAKYN------------VSRLQP---------YLKLRQAL------LELR 148
Query: 215 PQPLPAKVLVIGMLG-----MAANVPLGIWREHTEKFSVSWIVAVHAAVPFIAMMRKSVL 269
P VL+ G+LG +A +V L + F + W+ + P ++VL
Sbjct: 149 PAK---NVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSP------ETVL 199
Query: 270 MPKSAMAFTIAASVLGQVIGSRAERYRMKAV-TEKSVTLKEKS 311
+ + I + + S + R+ ++ E LK K
Sbjct: 200 EMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKP 242
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Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00