Citrus Sinensis ID: 018735

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-
Protein Sequence
MMNSNAASSSTANPDAAGSPDPPAPRRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPVANRTDKVAFIQSNASKTCTRQITHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYLVKPRRLGDPSYLSWNRNPGGH
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccccccccccccEEEEcccccEEEEEccccccccEEEEEEEccHHHcHHHHHHcccHHHHccccccccccccccccccccccEEEEccccccccccccEEEEcccEEcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccHHHHHHHccccccccccEEEEEEEEEEcccccccEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccccccccHcHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccccccccccccccEEEcccccccEEEEEEccccccEEEEEEcccHHHcccHEEEEccHHHHcccccccccccccccccccccccEcccHHHHHHcccccEEEcccccEEEEccccEEcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccHHHHHHHHHHccccccccEEEEEEEEcccEEEEccEEEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccc
Coil and Loop (DISEMBL)
mmnsnaassstanpdaagspdppaprrsskrpkyskftqqelpackpiltpkWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYetdcipvanrtdkvAFIQSNASKTCTRqithmkrpvYVYYQLDNFYQNHRRYVKsrndeqlkkrsktsetsqcepedttpdgkpivpcgliawslfndtytfsrnkrqltvnkngiawksdrdhkfgkevfpsnfqngtliggahlnesiplskqeDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILennyntysfsgKKKLVLSTTswlggkndFLGIAYLTVGGLCFFLALSFTIVYlvkprrlgdpsylswnrnpggh
Flexible Loop (DISEMBL)
mmnsnaassstanpdaagspdppaprrsskrpkyskftqqelpackpiltPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETdcipvanrtdkvafiqsnasktctrqithmkrPVYVYYQLDNFYQNHRRYVKsrndeqlkkrsktsetsqcepedttpdgkpiVPCGLIAWSLFNDTYTfsrnkrqltvnkngiawksdrdHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYLVKprrlgdpsylswnrnpggh
Low Complexity Region (SEG)
MMnsnaassstanpdaagspdppaprrsskrpkYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPVANRTDKVAFIQSNASKTCTRQITHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYLVKPRRLGDPSYLSWNRNPGGH
Disordered region (IsUnstruct)
*****************************************LPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPVANRTDKVAFIQSNASKTCTRQITHMKRPVYVYYQLDNFYQNHRRYV******************************PIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYLVKPRRLGDPSYL*********
Disordered Region (DISOPRED)
*************************************TQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPVANRTDKVAFIQSNASKTCTRQITHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYLVKPRRLGDPSYL**N******
Disordered Region (DISEMBL)
**************************************QQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPVANRTDKVAFIQSNASKTCTRQITHMKRPVYVYYQLDNFYQNHRRYVKS*************************DGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYLVKPRRLGDPSYLSWNRNPGGH
Disordered Region (DISPRO)
*******************************PKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPVANRTDKVAFIQSNASKTCTRQITHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYLVKPRRLG**S***********
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MMNSNAASSSTANPDAAGSPDPPAPRRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPVANRTDKVAFIQSNASKTCTRQITHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYLVKPRRLGDPSYLSWNRNPGGH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	351	2.2.26 [Sep-21-2011]
Q9SLK2	349	ALA-interacting subunit 3	yes	no	0.925	0.931	0.729	1e-144
Q9LTW0	350	ALA-interacting subunit 1	no	no	0.925	0.928	0.720	1e-142
Q8L8W0	350	ALA-interacting subunit 5	no	no	0.923	0.925	0.707	1e-141
Q9SA35	336	Putative ALA-interacting	no	no	0.897	0.937	0.702	1e-135
Q67YS6	343	Putative ALA-interacting	no	no	0.923	0.944	0.578	1e-110
Q96WW4	371	Invasion protein 1 OS=Sch	yes	no	0.891	0.843	0.362	5e-51
Q1MTQ5	396	Meiotically up-regulated	no	no	0.914	0.810	0.350	3e-47
Q5F362	372	Cell cycle control protei	yes	no	0.840	0.793	0.413	1e-46
Q8BHG3	353	Cell cycle control protei	yes	no	0.849	0.844	0.333	5e-45
Q3MIR4	351	Cell cycle control protei	yes	no	0.863	0.863	0.332	1e-44

>sp|Q9SLK2|ALIS3_ARATH ALA-interacting subunit 3 OS=Arabidopsis thaliana GN=ALIS3 PE=1 SV=1

 Score =  510 bits (1313), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 240/329 (72%), Positives = 273/329 (82%), Gaps = 4/329 (1%)

Query: 26  RRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDR 85
           R++SKRPKYSKFTQQELPACKPILTP WVI TFL+V + F+P+G+ SL AS+DVVEIVDR
Sbjct: 22  RKNSKRPKYSKFTQQELPACKPILTPGWVISTFLIVSVIFIPLGVISLFASQDVVEIVDR 81

Query: 86  YETDCIPVANRTDKVAFIQSNASKTCTRQIT---HMKRPVYVYYQLDNFYQNHRRYVKSR 142
           Y+T+CIP   RT+KVA+IQ +  K C R +     MK+P+YVYYQL+NFYQNHRRYVKSR
Sbjct: 82  YDTECIPAPARTNKVAYIQGDGDKVCNRDLKVTKRMKQPIYVYYQLENFYQNHRRYVKSR 141

Query: 143 NDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGI 202
           +D QL+     ++ S C+PED    G+PIVPCGLIAWSLFNDTY  SRN   L VNK GI
Sbjct: 142 SDSQLRSTKYENQISACKPEDDV-GGQPIVPCGLIAWSLFNDTYALSRNNVSLAVNKKGI 200

Query: 203 AWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGK 262
           AWKSD++HKFG +VFP NFQ G + GGA L+  IPLS+QEDLIVWMRTAALPTFRKLYGK
Sbjct: 201 AWKSDKEHKFGNKVFPKNFQKGNITGGATLDPRIPLSEQEDLIVWMRTAALPTFRKLYGK 260

Query: 263 IEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLA 322
           IE DLE  D I V L NNYNTYSF+GKKKLVLSTTSWLGGKNDFLGIAYLTVGG+CF LA
Sbjct: 261 IESDLEMGDTIHVKLNNNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGICFILA 320

Query: 323 LSFTIVYLVKPRRLGDPSYLSWNRNPGGH 351
           L+FTI+YLVKPRRLGDPSYLSWNRNPGG 
Sbjct: 321 LAFTIMYLVKPRRLGDPSYLSWNRNPGGR 349

Required for the lipid transport activity of the ALA/ALIS P4-ATPase complex.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9LTW0|ALIS1_ARATH ALA-interacting subunit 1 OS=Arabidopsis thaliana GN=ALIS1 PE=1 SV=1

 Score =  506 bits (1303), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 237/329 (72%), Positives = 277/329 (84%), Gaps = 4/329 (1%)

Query: 26  RRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDR 85
           RR+SKRPKYSKFTQQELPACKPILTP WVI TFL++ + F+P+G+ SL AS+DVVEIVDR
Sbjct: 23  RRNSKRPKYSKFTQQELPACKPILTPGWVISTFLIISVIFIPLGVISLFASQDVVEIVDR 82

Query: 86  YETDCIPVANRTDKVAFIQSNASKTCTRQIT---HMKRPVYVYYQLDNFYQNHRRYVKSR 142
           Y++ CIP+++R +KVA+IQ   +K+CTR +     MK+P+YVYYQL+NFYQNHRRYVKSR
Sbjct: 83  YDSACIPLSDRANKVAYIQGTGNKSCTRTLIVPKRMKQPIYVYYQLENFYQNHRRYVKSR 142

Query: 143 NDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGI 202
           +D QL+     ++   C+PED    G+PIVPCGLIAWSLFNDTY  SRN + LTVNK GI
Sbjct: 143 SDSQLRSVKDENQIDACKPEDDF-GGQPIVPCGLIAWSLFNDTYVLSRNNQGLTVNKKGI 201

Query: 203 AWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGK 262
           AWKSD++HKFGK VFP NFQ G L GGA L+ + PLS QEDLIVWMRTAALPTFRKLYGK
Sbjct: 202 AWKSDKEHKFGKNVFPKNFQKGNLTGGASLDPNKPLSDQEDLIVWMRTAALPTFRKLYGK 261

Query: 263 IEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLA 322
           IE DLE+ + I V L+NNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGG+CF LA
Sbjct: 262 IESDLEKGENIQVTLQNNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGICFVLA 321

Query: 323 LSFTIVYLVKPRRLGDPSYLSWNRNPGGH 351
           L+FT++YLVKPRRLGDP+YLSWNR PGG 
Sbjct: 322 LAFTVMYLVKPRRLGDPTYLSWNRIPGGR 350

Required for the lipid transport activity of the ALA/ALIS P4-ATPase complex.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8L8W0|ALIS5_ARATH ALA-interacting subunit 5 OS=Arabidopsis thaliana GN=ALIS5 PE=1 SV=1

 Score =  501 bits (1289), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 232/328 (70%), Positives = 271/328 (82%), Gaps = 4/328 (1%)

Query: 26  RRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDR 85
           +++SKRPKYS+FTQQELPACKPILTP+WVILTFLV G+ F+P+G+  L AS+ VVEIVDR
Sbjct: 22  KKTSKRPKYSRFTQQELPACKPILTPRWVILTFLVAGVVFIPLGVICLFASQGVVEIVDR 81

Query: 86  YETDCIPVANRTDKVAFIQSNASKTCTRQIT---HMKRPVYVYYQLDNFYQNHRRYVKSR 142
           Y+TDCIP ++R + VA+IQ    K C R IT    MK PVYVYYQL+NFYQNHRRYVKSR
Sbjct: 82  YDTDCIPTSSRNNMVAYIQGEGDKICKRTITVTKAMKHPVYVYYQLENFYQNHRRYVKSR 141

Query: 143 NDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGI 202
           ND QL+   +  +   C PED    G+PIVPCGL+AWSLFNDTY+FSRN +QL VNK GI
Sbjct: 142 NDAQLRSPKEEHDVKTCAPEDNV-GGEPIVPCGLVAWSLFNDTYSFSRNSQQLLVNKKGI 200

Query: 203 AWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGK 262
           +WKSDR++KFGK VFP NFQ G  IGG  LN S PLS+QEDLIVWMRTAALPTFRKLYGK
Sbjct: 201 SWKSDRENKFGKNVFPKNFQKGAPIGGGTLNISKPLSEQEDLIVWMRTAALPTFRKLYGK 260

Query: 263 IEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLA 322
           IE DL   D I V+L+NNYNTYSF+G+KKLVLSTTSWLGG+NDFLGIAYLTVG +C FLA
Sbjct: 261 IETDLHAGDTITVLLQNNYNTYSFNGQKKLVLSTTSWLGGRNDFLGIAYLTVGSICLFLA 320

Query: 323 LSFTIVYLVKPRRLGDPSYLSWNRNPGG 350
           ++F ++YLVKPR+LGDPSYLSWNR+ GG
Sbjct: 321 VTFAVLYLVKPRQLGDPSYLSWNRSAGG 348

Required for the lipid transport activity of the ALA/ALIS P4-ATPase complex.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SA35|ALIS4_ARATH Putative ALA-interacting subunit 4 OS=Arabidopsis thaliana GN=ALIS4 PE=2 SV=2

 Score =  481 bits (1238), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 224/319 (70%), Positives = 264/319 (82%), Gaps = 4/319 (1%)

Query: 35  SKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPVA 94
           S+FTQQELPACKPILTPKWVILTFLV G+ F+P+G+  L AS+ V+EIVDRY+TDCIP++
Sbjct: 17  SRFTQQELPACKPILTPKWVILTFLVSGVVFIPLGVICLFASQGVIEIVDRYDTDCIPLS 76

Query: 95  NRTDKVAFIQSNASKTCTRQIT---HMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRS 151
           +R +KV +IQ    K C R IT    MK PVYVYYQL+N+YQNHRRYVKSR D QL+   
Sbjct: 77  SRDNKVRYIQGLEDKRCNRTITVTKTMKNPVYVYYQLENYYQNHRRYVKSRQDGQLRSPK 136

Query: 152 KTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGIAWKSDRDHK 211
              ET  C PEDT   G+PIVPCGL+AWSLFNDTY F+RN ++L VNK  I+WKSDR+ K
Sbjct: 137 DEHETKSCAPEDTL-GGQPIVPCGLVAWSLFNDTYDFTRNNQKLPVNKKDISWKSDRESK 195

Query: 212 FGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEEND 271
           FGK VFP NFQ G+LIGG  L++ IPLS+QEDLIVWMRTAALPTFRKLYGKI+ DL+  D
Sbjct: 196 FGKNVFPKNFQKGSLIGGKSLDQDIPLSEQEDLIVWMRTAALPTFRKLYGKIDTDLQAGD 255

Query: 272 IIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYLV 331
            I V+L+NNYNTYSF+GKKKLVLSTTSWLGG+NDFLGIAYLTVG +C FLA+SF+++YL 
Sbjct: 256 TIKVLLQNNYNTYSFNGKKKLVLSTTSWLGGRNDFLGIAYLTVGSICLFLAVSFSVLYLA 315

Query: 332 KPRRLGDPSYLSWNRNPGG 350
           KPR+LGDPSYLSWNR+ GG
Sbjct: 316 KPRQLGDPSYLSWNRSAGG 334

Arabidopsis thaliana (taxid: 3702)

>sp|Q67YS6|ALIS2_ARATH Putative ALA-interacting subunit 2 OS=Arabidopsis thaliana GN=ALIS2 PE=2 SV=1

 Score =  397 bits (1019), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 192/332 (57%), Positives = 251/332 (75%), Gaps = 8/332 (2%)

Query: 19  SPDPPAPRRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRD 78
           +PD  +  RS +     +F QQ+LPACKP+LTP  VI  F+++G  F+PIG+ +L ASRD
Sbjct: 11  APDQSSFLRSRRSKALYQFKQQKLPACKPVLTPISVITVFMLMGFVFIPIGLITLRASRD 70

Query: 79  VVEIVDRYETDCIPVANRTDKVAFI-QSNASKTCTRQIT---HMKRPVYVYYQLDNFYQN 134
            +EI+DRY+ +CIP   RT+K+ +I  S+  K CTR +    +MK P+++YYQLDN+YQN
Sbjct: 71  AIEIIDRYDVECIPEEYRTNKLLYITDSSIPKNCTRYLKVQKYMKAPIFIYYQLDNYYQN 130

Query: 135 HRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQ 194
           HRRYVKSR+D+QL    + S TS CEPE+++ +G PIVPCGLIAWS+FNDT+TFSR + +
Sbjct: 131 HRRYVKSRSDQQLLHGLEYSHTSSCEPEESS-NGLPIVPCGLIAWSMFNDTFTFSRERTK 189

Query: 195 LTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALP 254
           L V++N IAWKSDR+HKFGK V+P NFQNGTLIGGA L+  IPLS QED IVWMR AAL 
Sbjct: 190 LNVSRNNIAWKSDREHKFGKNVYPINFQNGTLIGGAKLDPKIPLSDQEDFIVWMRAAALL 249

Query: 255 TFRKLYGKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTV 314
           +FRKLYG+IE DLE   +++V L NNYNTYSFSG+KKL+LST++WLGG+NDFLGI YL V
Sbjct: 250 SFRKLYGRIEEDLEPGKVVEVNLMNNYNTYSFSGQKKLILSTSNWLGGRNDFLGITYLVV 309

Query: 315 GGLCFFLALSFTIVYLVKPRRLGDPSYLSWNR 346
           G     +++ F +++L  PR  GD    SWN+
Sbjct: 310 GSSSIVISIIFMLLHLKNPRPYGDN---SWNK 338

Arabidopsis thaliana (taxid: 3702)

>sp|Q96WW4|IVN1_SCHPO Invasion protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ivn1 PE=3 SV=1

 Score =  201 bits (512), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 129/356 (36%), Positives = 185/356 (51%), Gaps = 43/356 (12%)

Query: 30  KRPKYSKFTQQELPACKPILTPKWVILTFL-VVGIAFVPIGITSLLASRDVVEIVDRYET 88
           KRP  S+F QQ LPA + I TP W +L  L ++GI F P+G    +ASR V E+   Y T
Sbjct: 16  KRPDKSRFVQQTLPAWQFIFTP-WTVLPLLFLLGIVFAPLGAGMFVASRRVKELRIDY-T 73

Query: 89  DCIPVANR---------------TDKVAFIQSNASKTCTRQIT---HMKRPVYVYYQLDN 130
           DC+ + +                   V  +  ++   CT +      M  PV+ +Y+L N
Sbjct: 74  DCMNIGDEFKQVPSTNIEFQYKNVKNVTAMWKSSGDVCTLRFQIPEEMTSPVFAFYRLKN 133

Query: 131 FYQNHRRYVKSRNDEQLKKRSKTSETSQ----CEPEDTTPDGKPIVPCGLIAWSLFNDTY 186
           FYQNHRRY  S +  QL   ++T    +    C+P +   +GKP  PCG+IA SLFND+Y
Sbjct: 134 FYQNHRRYTVSADMFQLLGEARTVAQLKSYGFCKPLEANEEGKPYYPCGIIANSLFNDSY 193

Query: 187 TF--------SRNKRQL-TVNKNGIAWKSDRD------HKFGKEVFPSNFQNGTLIGGAH 231
           +         S N   L  +  NG AW  DR+      +   + V P N+    +    +
Sbjct: 194 SSLLRYESFDSSNSLGLYNMTTNGTAWPEDRERYKKTKYNASQIVPPPNW--AKMFPNGY 251

Query: 232 LNESIP-LSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILENNYNTYSFSGKK 290
            +++IP +S  +   +WMR AALPTF KL  +      +  I ++ +  N+    + G K
Sbjct: 252 TDDNIPDVSTWDAFQIWMRAAALPTFSKLALRNVTTALQPGIYEMNITYNFPVTEYKGTK 311

Query: 291 KLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYLVKPRRLGDPSYLSWNR 346
            ++ STTS +GGKN FLGI Y  +GGLC    +  +I  L+KPRR+GDP YLSWNR
Sbjct: 312 TIMFSTTSVIGGKNYFLGILYFVIGGLCAASGVILSIACLIKPRRVGDPRYLSWNR 367

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q1MTQ5|MUG89_SCHPO Meiotically up-regulated gene 89 protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mug89 PE=1 SV=1

 Score =  189 bits (479), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 129/368 (35%), Positives = 185/368 (50%), Gaps = 47/368 (12%)

Query: 24  APRRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIV 83
            P   ++ P  + F QQ + + +P+LTPK V+  F V+GI F P+G   L AS  V E+V
Sbjct: 16  GPVAKTRAPPNTSFRQQRIKSWQPLLTPKIVLPLFFVLGIIFGPLGGGLLYASSIVQELV 75

Query: 84  DRYETDCIPVANRTD---------KVAFIQSNA-----------------------SKTC 111
             Y TDC  +A+  +           +F QS                            C
Sbjct: 76  VDY-TDCETLASYDEFSAVPSKKYTASFDQSGTIGFDKESTYWKLEKILDKDLDMDVNYC 134

Query: 112 TRQITH---MKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKTSET---SQCEPEDTT 165
             + T    +K P+++YY+L NF+QNHRRY KS +++QL+  + T++      C P +  
Sbjct: 135 IIRFTVPSVLKAPIFIYYRLTNFFQNHRRYAKSVDEKQLQGVALTADEVKGGNCFPLEVN 194

Query: 166 PDGKPIVPCGLIAWSLFNDTYTFSR---NKRQLTVNKNGIAWKSDRDHKFGKEVFPSNFQ 222
            D KP  PCGLIA SLFNDT++  R   +    T +   IAW SD+         P +  
Sbjct: 195 EDDKPYYPCGLIANSLFNDTFSSLRLLDDNSVYTFSTKNIAWASDKRRFLKTNYSPDDVA 254

Query: 223 ---NGTL-IGGAHLNESIP-LSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVIL 277
              N  L     +   ++P LS  E+L VWMRTA LPTF KL  + + D       ++ +
Sbjct: 255 PPPNWVLRYPDGYTESNMPDLSTMENLQVWMRTAGLPTFSKLAMRNDNDDIFPGTYEIKI 314

Query: 278 ENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYLVKPRRLG 337
              +   SF G K LVL+T S LGGKN FLGIAY+ V  +C  L   FT+ + ++PR+L 
Sbjct: 315 GLFFPVKSFDGTKSLVLTTRSVLGGKNPFLGIAYIVVSAVCVVLGTVFTLRHFIRPRKLA 374

Query: 338 DPSYLSWN 345
           D  YL+W+
Sbjct: 375 DHRYLNWD 382

Has a role in meiosis.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q5F362|CC50A_CHICK Cell cycle control protein 50A OS=Gallus gallus GN=TMEM30A PE=2 SV=1

 Score =  187 bits (475), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 186/331 (56%), Gaps = 36/331 (10%)

Query: 29  SKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYET 88
           +++P  + F QQ LPA +PILT   V+  F ++G+ F+PIGI   + S ++ E    YE 
Sbjct: 34  TRKPDNTAFKQQRLPAWQPILTAGTVLPAFFIIGLIFIPIGIGIFVTSNNIRE----YEI 89

Query: 89  DCIPV-----ANRTDKVAFIQSNASKTCTRQIT---HMKRPVYVYYQLDNFYQNHRRYVK 140
           D   V      N+   V++  S    TCT   T     +  V++YY L NFYQNHRRYVK
Sbjct: 90  DYTGVEPSSPCNKCLNVSW-DSTPPCTCTINFTLEHSFESNVFMYYGLSNFYQNHRRYVK 148

Query: 141 SRNDEQLK--KRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDT---YTFSRNKR-Q 194
           SR+D QL     S  + + +CEP  T  D KPI PCG IA S+FNDT   Y    + R  
Sbjct: 149 SRDDSQLNGDNSSLLNPSKECEPYRTNED-KPIAPCGAIANSMFNDTLELYHIENDTRTA 207

Query: 195 LTVNKNGIAWKSDRDHKF----GKEVFPSNFQNGT----LIGGAHLNESIPLSK---QED 243
           +T+ K GIAW +D++ KF    G     + FQ  T         ++ +S P +     ED
Sbjct: 208 ITLIKKGIAWWTDKNVKFRNPKGDGNLTALFQGTTKPVNWPKPVYMLDSEPDNNGFINED 267

Query: 244 LIVWMRTAALPTFRKLYGKIEVDLEENDIID-----VILENNYNTYSFSGKKKLVLSTTS 298
            IVWMRTAALPTFRKLY  IE        +      + +  NY  +SF G+K+++LST S
Sbjct: 268 FIVWMRTAALPTFRKLYRLIERKSNLQPTLQAGKYSLNITYNYPVHSFDGRKRMILSTIS 327

Query: 299 WLGGKNDFLGIAYLTVGGLCFFLALSFTIVY 329
           W+GGKN FLGIAY+TVG +CFFL +   I++
Sbjct: 328 WMGGKNPFLGIAYITVGSICFFLGVVLLIIH 358

Gallus gallus (taxid: 9031)

>sp|Q8BHG3|CC50B_MOUSE Cell cycle control protein 50B OS=Mus musculus GN=Tmem30b PE=2 SV=1

 Score =  181 bits (460), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 115/345 (33%), Positives = 165/345 (47%), Gaps = 47/345 (13%)

Query: 24  APRRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIV 83
           A  R + +P  + FTQQ LPA +P+L+    +  F   G+AF+ +G+    +S  + E+ 
Sbjct: 5   ATARGAHQPDNTAFTQQRLPAWQPLLSAGIALPLFFCAGLAFIGLGLGLFYSSNGIKELE 64

Query: 84  DRYET-----DCIPVANRTDKVAFIQSNASKTCTRQITHMKRPVYVYYQLDNFYQNHRRY 138
             Y       DC   A +    A     A             PVY+YY+L NFYQN+RRY
Sbjct: 65  YDYTGNPGTGDCSVCAAKGQGRAPPPGCACSWSFTLPELFPGPVYLYYELSNFYQNNRRY 124

Query: 139 VKSRNDEQLKKRSKT--SETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKR--- 193
             SR+D QL   +       ++C P     DG PI PCG IA SLFND+++    ++   
Sbjct: 125 GVSRDDAQLSGLASALRHPANECAPYQFRSDGLPIAPCGAIANSLFNDSFSLWHQRQPSD 184

Query: 194 ---QLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHL----------NESIPLSK 240
              ++ +++  IAW +D   K         F+N  L+ G+            N   P+ +
Sbjct: 185 PFVEVPLDRTAIAWWTDYHVK---------FRNPPLVNGSLALAFRGTAPPPNWHRPVYE 235

Query: 241 -----------QEDLIVWMRTAALPTFRKLYGKIEVDLEENDI----IDVILENNYNTYS 285
                       +D +VWMRTAALPTFRKLY +I        +      V +  NY   +
Sbjct: 236 LSPDPNNTGFINQDFVVWMRTAALPTFRKLYARIRQGNYSAGLPRGTYRVNITYNYPVRA 295

Query: 286 FSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYL 330
           F G K ++LS  SW+GGKN FLGIAYL VG LC  +     +VY+
Sbjct: 296 FGGHKLIILSNISWMGGKNPFLGIAYLVVGSLCIVMGFVMLVVYI 340

Mus musculus (taxid: 10090)

>sp|Q3MIR4|CC50B_HUMAN Cell cycle control protein 50B OS=Homo sapiens GN=TMEM30B PE=2 SV=1

 Score =  180 bits (457), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/340 (33%), Positives = 162/340 (47%), Gaps = 37/340 (10%)

Query: 24  APRRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIV 83
           A  R + +P  + FTQQ LPA +P+L+    +  F   G+AF+ +G+    +S  + E+ 
Sbjct: 5   ATARGAHQPDNTAFTQQRLPAWQPLLSASIALPLFFCAGLAFIGLGLGLYYSSNGIKELE 64

Query: 84  DRYETD-----CIPVANRTDKVAFIQSNASKTCTRQITHMKRPVYVYYQLDNFYQNHRRY 138
             Y  D     C   A      A     +           + PVY+YY+L NFYQN+RRY
Sbjct: 65  YDYTGDPGTGNCSVCAAAGQGRALPPPCSCAWYFSLPELFQGPVYLYYELTNFYQNNRRY 124

Query: 139 VKSRNDEQLKKRSKT--SETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKR--- 193
             SR+D QL           ++C P   +  G PI PCG IA SLFND+++    ++   
Sbjct: 125 GVSRDDAQLSGLPSALRHPVNECAPYQRSAAGLPIAPCGAIANSLFNDSFSLWHQRQPGG 184

Query: 194 ---QLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQ--------- 241
              ++ ++++GIAW +D   KF          NG+L          P  ++         
Sbjct: 185 PYVEVPLDRSGIAWWTDYHVKFRNP----PLVNGSLALAFQGTAPPPNWRRPVYELSPDP 240

Query: 242 -------EDLIVWMRTAALPTFRKLYGKIEVDLEENDI----IDVILENNYNTYSFSGKK 290
                  +D +VWMRTAALPTFRKLY +I        +      V +  NY   +F G K
Sbjct: 241 NNTGFINQDFVVWMRTAALPTFRKLYARIRQGNYSAGLPRGAYRVNITYNYPVRAFGGHK 300

Query: 291 KLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYL 330
            L+ S+ SW+GGKN FLGIAYL VG LC        +VY+
Sbjct: 301 LLIFSSISWMGGKNPFLGIAYLVVGSLCILTGFVMLVVYI 340

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	351
225462291	349	PREDICTED: ALA-interacting subunit 3 [Vi	0.928	0.934	0.781	1e-153
388521419	343	unknown [Lotus japonicus]	0.954	0.976	0.755	1e-153
356556656	344	PREDICTED: ALA-interacting subunit 3-lik	0.968	0.988	0.750	1e-152
356557044	344	PREDICTED: ALA-interacting subunit 3-lik	0.968	0.988	0.756	1e-152
449444288	343	PREDICTED: ALA-interacting subunit 3-lik	0.925	0.947	0.762	1e-151
356525734	344	PREDICTED: ALA-interacting subunit 3-lik	0.948	0.968	0.763	1e-149
363807744	344	uncharacterized protein LOC100796102 [Gl	0.968	0.988	0.730	1e-148
255550745	350	conserved hypothetical protein [Ricinus	0.928	0.931	0.752	1e-146
224098834	350	predicted protein [Populus trichocarpa]	0.934	0.937	0.722	1e-145
224112329	350	predicted protein [Populus trichocarpa]	0.934	0.937	0.728	1e-144

>gi|225462291|ref|XP_002265244.1| PREDICTED: ALA-interacting subunit 3 [Vitis vinifera] gi|297736110|emb|CBI24148.3| unnamed protein product [Vitis vinifera]

 Score =  547 bits (1410), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 258/330 (78%), Positives = 289/330 (87%), Gaps = 4/330 (1%)

Query: 25  PRRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVD 84
           PRR+SKRPKYS+FTQQELPACKPILTP+WVI  F++VGI F+PIG+ +L ASRDVVEIVD
Sbjct: 21  PRRNSKRPKYSRFTQQELPACKPILTPRWVISAFMLVGIIFIPIGVAALFASRDVVEIVD 80

Query: 85  RYETDCIPVANRTDKVAFIQSNASKTCTRQIT---HMKRPVYVYYQLDNFYQNHRRYVKS 141
           RYETDCIP   R DKV +IQ   +K C R +T    MK+P+YVYYQLDNFYQNHRRYVKS
Sbjct: 81  RYETDCIPEEFRNDKVNYIQKPGNKPCNRTLTVPKKMKQPIYVYYQLDNFYQNHRRYVKS 140

Query: 142 RNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNG 201
           RNDEQL+  +  +ETS C+PED   +G  IVPCGLIAWSLFNDTY FSRN  QL++NK G
Sbjct: 141 RNDEQLRSGNSANETSDCKPEDYA-NGAVIVPCGLIAWSLFNDTYNFSRNNEQLSLNKKG 199

Query: 202 IAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYG 261
           I+WKSDR+HKFGK+V+P NFQNGTLIGGA LNESIPLS+QEDLIVWMRTAALPTFRKLYG
Sbjct: 200 ISWKSDREHKFGKDVYPKNFQNGTLIGGATLNESIPLSEQEDLIVWMRTAALPTFRKLYG 259

Query: 262 KIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFL 321
           KIEVDL+ ND I V LENNYNTYSF+GKKKLVLSTTSWLGGKNDFLGIAYLTVGG+C FL
Sbjct: 260 KIEVDLQINDTIQVSLENNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGICIFL 319

Query: 322 ALSFTIVYLVKPRRLGDPSYLSWNRNPGGH 351
           A++FT+VYLVKPRRLGDPSYLSWNRNPGGH
Sbjct: 320 AMAFTVVYLVKPRRLGDPSYLSWNRNPGGH 349

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388521419|gb|AFK48771.1| unknown [Lotus japonicus]

 Score =  546 bits (1406), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 257/340 (75%), Positives = 295/340 (86%), Gaps = 5/340 (1%)

Query: 16  AAGSPDPPAP-RRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLL 74
           +AGS DP A  RR +KRPKYSKFTQQELPACKPILTP+ VI  FL+V I F+PIG+ SL+
Sbjct: 5   SAGSNDPTAATRRQTKRPKYSKFTQQELPACKPILTPRAVISAFLIVTIVFIPIGVASLI 64

Query: 75  ASRDVVEIVDRYETDCIPVANRTDKVAFIQSNASKTCTRQI---THMKRPVYVYYQLDNF 131
           ASRDVVEI+ RYE DC+P    +D+V +IQS+A KTCTR+I     MK P+YVYYQLDNF
Sbjct: 65  ASRDVVEIIHRYEADCVPGNWSSDEVGYIQSSADKTCTREIHVEKRMKSPIYVYYQLDNF 124

Query: 132 YQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRN 191
           YQNHRRYVKSRNDEQL+  SK + TS C+PED   +G PI+PCGLIAWS+FNDTY+FSRN
Sbjct: 125 YQNHRRYVKSRNDEQLRDSSKANSTSGCKPEDYV-NGVPILPCGLIAWSMFNDTYSFSRN 183

Query: 192 KRQLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTA 251
              LTVNK GI+WKSDR+HKFG +VFP NFQNGT+IGGAHLNE+IPLS+QEDLIVWMRTA
Sbjct: 184 NNNLTVNKKGISWKSDREHKFGDDVFPKNFQNGTIIGGAHLNETIPLSEQEDLIVWMRTA 243

Query: 252 ALPTFRKLYGKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAY 311
           ALPTFRKLYGKIE+DLE+ D+I V+L+NNYNTYSF+GKKKLVLSTTSWLGGKNDFLGIAY
Sbjct: 244 ALPTFRKLYGKIEMDLEKGDVIKVVLQNNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAY 303

Query: 312 LTVGGLCFFLALSFTIVYLVKPRRLGDPSYLSWNRNPGGH 351
           LTVGGL FFL++ FTIVY V+PR+LGDPSYLSWNRNPGGH
Sbjct: 304 LTVGGLSFFLSMVFTIVYFVEPRQLGDPSYLSWNRNPGGH 343

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356556656|ref|XP_003546639.1| PREDICTED: ALA-interacting subunit 3-like [Glycine max]

 Score =  543 bits (1398), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 259/345 (75%), Positives = 293/345 (84%), Gaps = 5/345 (1%)

Query: 10  STANPDAAGSPDPPAPRRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIG 69
           ST+N   AGS D  A RR SKRPKYSKFTQQELPACKPILTP+ VI  FL+V I F+PIG
Sbjct: 2   STSNAGGAGSNDSNATRRQSKRPKYSKFTQQELPACKPILTPRAVISAFLIVTIVFIPIG 61

Query: 70  ITSLLASRDVVEIVDRYETDCIPVANRTDKVAFIQSNASKTCTRQIT---HMKRPVYVYY 126
           + SL+AS DVVEI+DRY+  CIP +N TDKVA+IQ+   K C RQ+T    MK P+YVYY
Sbjct: 62  VASLIASHDVVEIIDRYDLRCIP-SNVTDKVAYIQTPGEKQCNRQLTVDKRMKSPIYVYY 120

Query: 127 QLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTY 186
           QLDNFYQNHRRYVKSRNDEQL+   K +  S CEPE+   +GK I+PCGLIAWSLFNDTY
Sbjct: 121 QLDNFYQNHRRYVKSRNDEQLRDSGKANSVSGCEPENNA-NGKAILPCGLIAWSLFNDTY 179

Query: 187 TFSRNKRQLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIV 246
           +FSRN + LTVNK  I+WKSDRDHKFG +VFP NFQNG++IGG  LNESIPLS+QEDLIV
Sbjct: 180 SFSRNSKNLTVNKKDISWKSDRDHKFGSDVFPKNFQNGSIIGGGSLNESIPLSEQEDLIV 239

Query: 247 WMRTAALPTFRKLYGKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDF 306
           WMRTAALPTFRKLYGKIEVDLE+ D+I+V L NNYNTYSF+GKKKLVLSTTS+LGGKNDF
Sbjct: 240 WMRTAALPTFRKLYGKIEVDLEKGDVINVNLHNNYNTYSFNGKKKLVLSTTSFLGGKNDF 299

Query: 307 LGIAYLTVGGLCFFLALSFTIVYLVKPRRLGDPSYLSWNRNPGGH 351
           LGIAYLTVGGL FFL+++FTIVYLVKPR+LGDPSYLSWNRNPGGH
Sbjct: 300 LGIAYLTVGGLSFFLSMAFTIVYLVKPRQLGDPSYLSWNRNPGGH 344

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356557044|ref|XP_003546828.1| PREDICTED: ALA-interacting subunit 3-like [Glycine max]

 Score =  542 bits (1396), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 264/349 (75%), Positives = 295/349 (84%), Gaps = 9/349 (2%)

Query: 6   AASSSTANPDAAGSPDPPAPRRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAF 65
           A+SS+T     AGS DP A RR++KRPKYSKFTQQELPACKPILTP+ VI  FL+V I F
Sbjct: 2   ASSSATG----AGSTDPTAARRNTKRPKYSKFTQQELPACKPILTPRAVISAFLLVSIVF 57

Query: 66  VPIGITSLLASRDVVEIVDRYETDCIPVANRTDKVAFIQSNASKTCTRQI---THMKRPV 122
           VPIG+ SL+ASR VVEIV RYE+ CIP    TDKVA+IQS A KTC   +    HMK P+
Sbjct: 58  VPIGVASLIASRKVVEIVFRYESTCIP-HEVTDKVAYIQSPADKTCKISLPVDKHMKSPI 116

Query: 123 YVYYQLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLF 182
           YVYYQLDNFYQNHRRYVKSR+DEQL+ R + + TS C PED   +GK IVPCGLIAWSLF
Sbjct: 117 YVYYQLDNFYQNHRRYVKSRSDEQLRDRREENSTSACNPEDIA-NGKAIVPCGLIAWSLF 175

Query: 183 NDTYTFSRNKRQLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQE 242
           NDTY+FSR+ + LTVNKNGI+WKSDR+HKFGK+VFP NFQ+  + GGA LNESIPLSKQE
Sbjct: 176 NDTYSFSRDNKNLTVNKNGISWKSDREHKFGKDVFPKNFQSSAIRGGASLNESIPLSKQE 235

Query: 243 DLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGG 302
           DLIVWMRTAALPTFRKLYGKIEVDL   D I+V L+NNYNTYSF+GKKKLVLSTTSWLGG
Sbjct: 236 DLIVWMRTAALPTFRKLYGKIEVDLNAGDQINVTLQNNYNTYSFNGKKKLVLSTTSWLGG 295

Query: 303 KNDFLGIAYLTVGGLCFFLALSFTIVYLVKPRRLGDPSYLSWNRNPGGH 351
           KNDFLGIAYLTVGGLCFFLAL+FT+VY VKPR+LGDPSYLSWNRNPGGH
Sbjct: 296 KNDFLGIAYLTVGGLCFFLALAFTVVYFVKPRQLGDPSYLSWNRNPGGH 344

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449444288|ref|XP_004139907.1| PREDICTED: ALA-interacting subunit 3-like [Cucumis sativus] gi|449475853|ref|XP_004154570.1| PREDICTED: ALA-interacting subunit 3-like [Cucumis sativus]

 Score =  541 bits (1395), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 251/329 (76%), Positives = 288/329 (87%), Gaps = 4/329 (1%)

Query: 26  RRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDR 85
           RR+SKRPKYS+FTQQELPACKPILTP+WVI  F++V I FVPIG+ SL ASRDVVEI+DR
Sbjct: 16  RRNSKRPKYSRFTQQELPACKPILTPRWVISAFMLVSIIFVPIGVASLFASRDVVEIIDR 75

Query: 86  YETDCIPVANRTDKVAFIQSNASKTCTRQIT---HMKRPVYVYYQLDNFYQNHRRYVKSR 142
           YET+CIP   R+DKV FIQ  A+K C R IT    MK+P+YVYYQLDNFYQNHRRYV+SR
Sbjct: 76  YETECIPERFRSDKVGFIQGTANKICRRNITVPKRMKQPIYVYYQLDNFYQNHRRYVQSR 135

Query: 143 NDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGI 202
           +D+QL+      +TS C+PED   +G+P+VPCGLIAWSLFNDTY F+ NK+Q+ +NK GI
Sbjct: 136 SDKQLRDPGSERDTSSCKPEDNW-NGQPVVPCGLIAWSLFNDTYNFTLNKKQVAINKVGI 194

Query: 203 AWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGK 262
           +WKSDR+HKFGK VFP NFQ G + GG  LNES+PLS+QEDLIVWMRTAALPTFRKLYGK
Sbjct: 195 SWKSDREHKFGKNVFPKNFQKGNITGGKKLNESVPLSQQEDLIVWMRTAALPTFRKLYGK 254

Query: 263 IEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLA 322
           IEVDLE+ND+IDV+LENNYNTYSF+GKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLA
Sbjct: 255 IEVDLEKNDVIDVVLENNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLA 314

Query: 323 LSFTIVYLVKPRRLGDPSYLSWNRNPGGH 351
           ++FT+VYLVKPRRLGDPSYLSWNRNP GH
Sbjct: 315 MAFTVVYLVKPRRLGDPSYLSWNRNPSGH 343

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356525734|ref|XP_003531478.1| PREDICTED: ALA-interacting subunit 3-like [Glycine max]

 Score =  533 bits (1374), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 258/338 (76%), Positives = 287/338 (84%), Gaps = 5/338 (1%)

Query: 16  AAGSPDPPAPRRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLA 75
            AGS DP A RR++KRPKYSKFTQQELPACKPILTP+ VI  FL+V I FVPIG+ SL+A
Sbjct: 8   GAGSTDPTAARRNTKRPKYSKFTQQELPACKPILTPRAVISAFLLVSIVFVPIGVASLIA 67

Query: 76  SRDVVEIVDRYETDCIPVANRTDKVAFIQSNASKTCTRQI---THMKRPVYVYYQLDNFY 132
           SR VVEIV RYE+ CIP    TDKVA+IQS A KTC   +    HMK P+YVYYQLDNFY
Sbjct: 68  SRKVVEIVSRYESTCIP-DGVTDKVAYIQSPADKTCHISLPVHKHMKSPIYVYYQLDNFY 126

Query: 133 QNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNK 192
           QNHRRYVKSR+DEQL+   + + T+ C+PED   +GK IVPCGLIAWSLFNDTY+FSR+ 
Sbjct: 127 QNHRRYVKSRSDEQLRDHREENSTNACKPEDIA-NGKAIVPCGLIAWSLFNDTYSFSRDN 185

Query: 193 RQLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAA 252
           + LTVNKNGI+WKSDR+HKFGK+VFP NFQ+  + GGA LN SIPLSKQEDLIVWMRTAA
Sbjct: 186 KNLTVNKNGISWKSDREHKFGKDVFPKNFQSSAIRGGATLNVSIPLSKQEDLIVWMRTAA 245

Query: 253 LPTFRKLYGKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYL 312
           LPTFRKLYGKIEVDL E D I V L+NNYNTYSF+GKKKLVLSTTSWLGGKNDFLGIAYL
Sbjct: 246 LPTFRKLYGKIEVDLNEGDNITVTLQNNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYL 305

Query: 313 TVGGLCFFLALSFTIVYLVKPRRLGDPSYLSWNRNPGG 350
           TVGGLCFFLAL+FTIVY VKPR+LGDPSYLSWNRNPGG
Sbjct: 306 TVGGLCFFLALAFTIVYFVKPRQLGDPSYLSWNRNPGG 343

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363807744|ref|NP_001242684.1| uncharacterized protein LOC100796102 [Glycine max] gi|255635427|gb|ACU18066.1| unknown [Glycine max]

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 252/345 (73%), Positives = 290/345 (84%), Gaps = 5/345 (1%)

Query: 10  STANPDAAGSPDPPAPRRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIG 69
           ST++   AGS D  A RR SKRPKYSKFTQQELPACKPILTP+ VI  FL+V I F+PIG
Sbjct: 2   STSDAGGAGSNDSHATRRQSKRPKYSKFTQQELPACKPILTPRAVISAFLIVTIVFIPIG 61

Query: 70  ITSLLASRDVVEIVDRYETDCIPVANRTDKVAFIQSNASKTCTRQIT---HMKRPVYVYY 126
           + SL+AS DVVEI+DRY++ CIP +N TDKVA+IQ+   K C RQ+T    MK P+YVYY
Sbjct: 62  VASLIASHDVVEIIDRYDSHCIP-SNVTDKVAYIQTPGEKPCNRQLTVEKRMKSPIYVYY 120

Query: 127 QLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTY 186
           QLDNFYQNHRRYVKSRND+QL+   K S  S CEPE+   +G  I+PCGLIAWSLFNDTY
Sbjct: 121 QLDNFYQNHRRYVKSRNDDQLRDSGKASSVSGCEPENNV-NGMAILPCGLIAWSLFNDTY 179

Query: 187 TFSRNKRQLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIV 246
           +FSRN   LTVNK GI+WKSDRDHKFG +VFP NFQNG +IGG  L+E++PLS+ EDLIV
Sbjct: 180 SFSRNSNNLTVNKTGISWKSDRDHKFGSDVFPKNFQNGPIIGGGGLDENVPLSQHEDLIV 239

Query: 247 WMRTAALPTFRKLYGKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDF 306
           WMRTAALPTFRKLYGKIEVDLE+ D+I+V L NNYNTYSF+GKKKLVLSTTSWLGGKNDF
Sbjct: 240 WMRTAALPTFRKLYGKIEVDLEKGDVINVNLHNNYNTYSFNGKKKLVLSTTSWLGGKNDF 299

Query: 307 LGIAYLTVGGLCFFLALSFTIVYLVKPRRLGDPSYLSWNRNPGGH 351
           LGIAYLTVGGL FFL+++FT+VYLVK R+LGDPSYLSWNR+PGGH
Sbjct: 300 LGIAYLTVGGLSFFLSMAFTVVYLVKSRQLGDPSYLSWNRSPGGH 344

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255550745|ref|XP_002516421.1| conserved hypothetical protein [Ricinus communis] gi|223544456|gb|EEF45976.1| conserved hypothetical protein [Ricinus communis]

 Score =  523 bits (1348), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 249/331 (75%), Positives = 281/331 (84%), Gaps = 5/331 (1%)

Query: 25  PRRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVD 84
           PRR+SKRPKYS+FTQQELPACKPILTP+WVI  F++V I F+PIGI SL AS+DVVEI+D
Sbjct: 21  PRRNSKRPKYSRFTQQELPACKPILTPRWVISAFILVSIVFIPIGIASLTASQDVVEIID 80

Query: 85  RYETDCIPVANRTDKVAFIQS-NASKTCTRQI---THMKRPVYVYYQLDNFYQNHRRYVK 140
           RYET+CIP  NRTDKV +IQS +  K C R I     MK+P+YVYYQLDNFYQNHRRYVK
Sbjct: 81  RYETECIPAQNRTDKVGYIQSPDTDKRCNRTIRVTKRMKQPIYVYYQLDNFYQNHRRYVK 140

Query: 141 SRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKN 200
           SR+DEQL+  S  +ETS C+PEDT  +G  IVPCGLIAWSLFNDTY+FS N  +L VNK 
Sbjct: 141 SRSDEQLRSLSSENETSNCKPEDTV-NGIAIVPCGLIAWSLFNDTYSFSLNSMELQVNKK 199

Query: 201 GIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLY 260
            I+WKSDRDHKFGK+VFP NFQ G L GGA LN S PLS+QEDLIVWMRTAALPTFRKLY
Sbjct: 200 DISWKSDRDHKFGKDVFPKNFQMGDLRGGATLNTSKPLSEQEDLIVWMRTAALPTFRKLY 259

Query: 261 GKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFF 320
           GKIE DL+ ND + + L+NNYNTYSF GKKKLVLSTT+WLGGKNDFLGIAYLTVGG+CFF
Sbjct: 260 GKIEQDLQPNDELHITLQNNYNTYSFDGKKKLVLSTTTWLGGKNDFLGIAYLTVGGICFF 319

Query: 321 LALSFTIVYLVKPRRLGDPSYLSWNRNPGGH 351
           LA+SFT+VYL+KPRRLGDPSYLSWNR PGG 
Sbjct: 320 LAMSFTVVYLIKPRRLGDPSYLSWNRTPGGR 350

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224098834|ref|XP_002311284.1| predicted protein [Populus trichocarpa] gi|222851104|gb|EEE88651.1| predicted protein [Populus trichocarpa]

 Score =  520 bits (1338), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 239/331 (72%), Positives = 280/331 (84%), Gaps = 3/331 (0%)

Query: 24  APRRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIV 83
           APRR+SKRPKYSKFTQQELPACKPILTP+WV+  F+++ I F+PIGI  LL SRDVVE+ 
Sbjct: 20  APRRNSKRPKYSKFTQQELPACKPILTPRWVVSAFMIIAIVFIPIGIACLLGSRDVVEVS 79

Query: 84  DRYETDCIPVANRTDKVAFIQSNASKTCTRQIT---HMKRPVYVYYQLDNFYQNHRRYVK 140
            RYE DCIP  NR++KV FIQS+A+KTCT  +T    MK+P+YVYYQLDNFYQNHRRYVK
Sbjct: 80  KRYEIDCIPPENRSNKVQFIQSSANKTCTISMTIPKRMKKPIYVYYQLDNFYQNHRRYVK 139

Query: 141 SRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKN 200
           SR+D+QLK  SK ++TS C+PEDTT  G  IVPCGLIAWS+FNDTY FSR  ++LTVNK 
Sbjct: 140 SRSDKQLKSLSKETDTSSCKPEDTTAGGAAIVPCGLIAWSMFNDTYNFSRLNQELTVNKK 199

Query: 201 GIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLY 260
           GIAWKSD+  +FGK+VFP NFQ G L GG  LNE IPL++QEDL+VWMRTAALPTFRKLY
Sbjct: 200 GIAWKSDKQKRFGKDVFPKNFQGGGLQGGKILNEKIPLNEQEDLMVWMRTAALPTFRKLY 259

Query: 261 GKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFF 320
           GKIEVDLE N++I+V L+NNYNTYSF+GKKKLVLSTTSW+GG+NDFLGIAYLTVG +C  
Sbjct: 260 GKIEVDLEANEVINVTLDNNYNTYSFNGKKKLVLSTTSWIGGRNDFLGIAYLTVGMICLA 319

Query: 321 LALSFTIVYLVKPRRLGDPSYLSWNRNPGGH 351
           LA+ FT VY +KPRRLGDP++LSWNR PG  
Sbjct: 320 LAMGFTAVYFIKPRRLGDPTFLSWNRGPGSQ 350

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224112329|ref|XP_002316154.1| predicted protein [Populus trichocarpa] gi|222865194|gb|EEF02325.1| predicted protein [Populus trichocarpa]

 Score =  517 bits (1331), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 241/331 (72%), Positives = 278/331 (83%), Gaps = 3/331 (0%)

Query: 24  APRRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIV 83
           APRR+SKRPKYSKFTQQELPACKPILTP+WV+  F++V I F+PIGI  LL SRDVVE+V
Sbjct: 20  APRRNSKRPKYSKFTQQELPACKPILTPRWVVSAFMLVAIVFIPIGIACLLGSRDVVEVV 79

Query: 84  DRYETDCIPVANRTDKVAFIQSNASKTCTRQIT---HMKRPVYVYYQLDNFYQNHRRYVK 140
            RYET+CIPV NR ++V FIQS A KTCT  +T    MK+P+YVYYQLDNFYQNHRRYVK
Sbjct: 80  KRYETECIPVGNRGNEVQFIQSAADKTCTISMTIPKRMKQPIYVYYQLDNFYQNHRRYVK 139

Query: 141 SRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKN 200
           SR+DEQLK  SK ++TS CEPEDT      IVPCGLIAWSLFNDTY+FSR  + LTVNK 
Sbjct: 140 SRSDEQLKSASKENDTSSCEPEDTATGRGAIVPCGLIAWSLFNDTYSFSRLNQSLTVNKK 199

Query: 201 GIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLY 260
           GIAWKSD++ +FGK+VFP NFQ G L+GGA L+    LS QEDL+VWMRTAALPTFRKLY
Sbjct: 200 GIAWKSDKEKRFGKDVFPKNFQGGGLVGGARLDPLTRLSDQEDLMVWMRTAALPTFRKLY 259

Query: 261 GKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFF 320
           GKIEVDL+  ++I+V L NNYNTYSF+GKKKLVLSTTSW+GG+NDFLGIAYLTVG +CF 
Sbjct: 260 GKIEVDLDAKEVINVTLGNNYNTYSFNGKKKLVLSTTSWIGGRNDFLGIAYLTVGMICFA 319

Query: 321 LALSFTIVYLVKPRRLGDPSYLSWNRNPGGH 351
           L++ FTIVY VKPRRLGDP++LSWNR PG H
Sbjct: 320 LSMGFTIVYFVKPRRLGDPTFLSWNRGPGSH 350

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	351
TAIR|locus:2020018	349	AT1G54320 [Arabidopsis thalian	0.900	0.905	0.734	5.2e-129
TAIR|locus:2087695	350	ALIS1 "ALA-interacting subunit	0.900	0.902	0.718	1.2e-127
TAIR|locus:2206400	350	ALIS5 "ALA-interacting subunit	0.900	0.902	0.709	4.8e-126
TAIR|locus:2032780	336	AT1G16360 [Arabidopsis thalian	0.897	0.937	0.702	8.9e-125
TAIR|locus:2161453	343	AT5G46150 "AT5G46150" [Arabido	0.874	0.895	0.596	7.7e-103
DICTYBASE|DDB_G0276567	312	DDB_G0276567 "CDC50/LEM3 famil	0.820	0.923	0.457	3.5e-59
ZFIN|ZDB-GENE-040704-26	372	tmem30aa "transmembrane protei	0.492	0.465	0.423	2.9e-52
ZFIN|ZDB-GENE-030131-5884	369	tmem30ab "transmembrane protei	0.492	0.468	0.417	2.9e-52
UNIPROTKB|Q17QL5	361	TMEM30A "Uncharacterized prote	0.484	0.470	0.414	4.8e-52
UNIPROTKB|E2R2Z8	361	TMEM30A "Uncharacterized prote	0.484	0.470	0.414	2e-51

TAIR|locus:2020018 AT1G54320 [Arabidopsis thaliana (taxid:3702)]

 Score = 1266 (450.7 bits), Expect = 5.2e-129, P = 5.2e-129
 Identities = 235/320 (73%), Positives = 267/320 (83%)

Query:    34 YSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPV 93
             YSKFTQQELPACKPILTP WVI TFL+V + F+P+G+ SL AS+DVVEIVDRY+T+CIP 
Sbjct:    30 YSKFTQQELPACKPILTPGWVISTFLIVSVIFIPLGVISLFASQDVVEIVDRYDTECIPA 89

Query:    94 ANRTDKVAFIQSNASKTCTR--QIT-HMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKR 150
               RT+KVA+IQ +  K C R  ++T  MK+P+YVYYQL+NFYQNHRRYVKSR+D QL+  
Sbjct:    90 PARTNKVAYIQGDGDKVCNRDLKVTKRMKQPIYVYYQLENFYQNHRRYVKSRSDSQLRST 149

Query:   151 SKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGIAWKSDRDH 210
                ++ S C+PED    G+PIVPCGLIAWSLFNDTY  SRN   L VNK GIAWKSD++H
Sbjct:   150 KYENQISACKPEDDV-GGQPIVPCGLIAWSLFNDTYALSRNNVSLAVNKKGIAWKSDKEH 208

Query:   211 KFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEEN 270
             KFG +VFP NFQ G + GGA L+  IPLS+QEDLIVWMRTAALPTFRKLYGKIE DLE  
Sbjct:   209 KFGNKVFPKNFQKGNITGGATLDPRIPLSEQEDLIVWMRTAALPTFRKLYGKIESDLEMG 268

Query:   271 DIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYL 330
             D I V L NNYNTYSF+GKKKLVLSTTSWLGGKNDFLGIAYLTVGG+CF LAL+FTI+YL
Sbjct:   269 DTIHVKLNNNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGICFILALAFTIMYL 328

Query:   331 VKPRRLGDPSYLSWNRNPGG 350
             VKPRRLGDPSYLSWNRNPGG
Sbjct:   329 VKPRRLGDPSYLSWNRNPGG 348

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

TAIR|locus:2087695 ALIS1 "ALA-interacting subunit 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1253 (446.1 bits), Expect = 1.2e-127, P = 1.2e-127
 Identities = 230/320 (71%), Positives = 269/320 (84%)

Query:    34 YSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPV 93
             YSKFTQQELPACKPILTP WVI TFL++ + F+P+G+ SL AS+DVVEIVDRY++ CIP+
Sbjct:    31 YSKFTQQELPACKPILTPGWVISTFLIISVIFIPLGVISLFASQDVVEIVDRYDSACIPL 90

Query:    94 ANRTDKVAFIQSNASKTCTRQIT---HMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKR 150
             ++R +KVA+IQ   +K+CTR +     MK+P+YVYYQL+NFYQNHRRYVKSR+D QL+  
Sbjct:    91 SDRANKVAYIQGTGNKSCTRTLIVPKRMKQPIYVYYQLENFYQNHRRYVKSRSDSQLRSV 150

Query:   151 SKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGIAWKSDRDH 210
                ++   C+PED    G+PIVPCGLIAWSLFNDTY  SRN + LTVNK GIAWKSD++H
Sbjct:   151 KDENQIDACKPEDDF-GGQPIVPCGLIAWSLFNDTYVLSRNNQGLTVNKKGIAWKSDKEH 209

Query:   211 KFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEEN 270
             KFGK VFP NFQ G L GGA L+ + PLS QEDLIVWMRTAALPTFRKLYGKIE DLE+ 
Sbjct:   210 KFGKNVFPKNFQKGNLTGGASLDPNKPLSDQEDLIVWMRTAALPTFRKLYGKIESDLEKG 269

Query:   271 DIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYL 330
             + I V L+NNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGG+CF LAL+FT++YL
Sbjct:   270 ENIQVTLQNNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGICFVLALAFTVMYL 329

Query:   331 VKPRRLGDPSYLSWNRNPGG 350
             VKPRRLGDP+YLSWNR PGG
Sbjct:   330 VKPRRLGDPTYLSWNRIPGG 349

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0016020 "membrane" evidence=ISS

GO:0015914 "phospholipid transport" evidence=IDA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

TAIR|locus:2206400 ALIS5 "ALA-interacting subunit 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 1238 (440.9 bits), Expect = 4.8e-126, P = 4.8e-126
 Identities = 227/320 (70%), Positives = 263/320 (82%)

Query:    34 YSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPV 93
             YS+FTQQELPACKPILTP+WVILTFLV G+ F+P+G+  L AS+ VVEIVDRY+TDCIP 
Sbjct:    30 YSRFTQQELPACKPILTPRWVILTFLVAGVVFIPLGVICLFASQGVVEIVDRYDTDCIPT 89

Query:    94 ANRTDKVAFIQSNASKTCTRQIT---HMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKR 150
             ++R + VA+IQ    K C R IT    MK PVYVYYQL+NFYQNHRRYVKSRND QL+  
Sbjct:    90 SSRNNMVAYIQGEGDKICKRTITVTKAMKHPVYVYYQLENFYQNHRRYVKSRNDAQLRSP 149

Query:   151 SKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGIAWKSDRDH 210
              +  +   C PED    G+PIVPCGL+AWSLFNDTY+FSRN +QL VNK GI+WKSDR++
Sbjct:   150 KEEHDVKTCAPEDNV-GGEPIVPCGLVAWSLFNDTYSFSRNSQQLLVNKKGISWKSDREN 208

Query:   211 KFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEEN 270
             KFGK VFP NFQ G  IGG  LN S PLS+QEDLIVWMRTAALPTFRKLYGKIE DL   
Sbjct:   209 KFGKNVFPKNFQKGAPIGGGTLNISKPLSEQEDLIVWMRTAALPTFRKLYGKIETDLHAG 268

Query:   271 DIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYL 330
             D I V+L+NNYNTYSF+G+KKLVLSTTSWLGG+NDFLGIAYLTVG +C FLA++F ++YL
Sbjct:   269 DTITVLLQNNYNTYSFNGQKKLVLSTTSWLGGRNDFLGIAYLTVGSICLFLAVTFAVLYL 328

Query:   331 VKPRRLGDPSYLSWNRNPGG 350
             VKPR+LGDPSYLSWNR+ GG
Sbjct:   329 VKPRQLGDPSYLSWNRSAGG 348

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

GO:0009543 "chloroplast thylakoid lumen" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0006865 "amino acid transport" evidence=RCA

TAIR|locus:2032780 AT1G16360 [Arabidopsis thaliana (taxid:3702)]

 Score = 1226 (436.6 bits), Expect = 8.9e-125, P = 8.9e-125
 Identities = 224/319 (70%), Positives = 264/319 (82%)

Query:    35 SKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPVA 94
             S+FTQQELPACKPILTPKWVILTFLV G+ F+P+G+  L AS+ V+EIVDRY+TDCIP++
Sbjct:    17 SRFTQQELPACKPILTPKWVILTFLVSGVVFIPLGVICLFASQGVIEIVDRYDTDCIPLS 76

Query:    95 NRTDKVAFIQSNASKTCTRQIT---HMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRS 151
             +R +KV +IQ    K C R IT    MK PVYVYYQL+N+YQNHRRYVKSR D QL+   
Sbjct:    77 SRDNKVRYIQGLEDKRCNRTITVTKTMKNPVYVYYQLENYYQNHRRYVKSRQDGQLRSPK 136

Query:   152 KTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGIAWKSDRDHK 211
                ET  C PEDT   G+PIVPCGL+AWSLFNDTY F+RN ++L VNK  I+WKSDR+ K
Sbjct:   137 DEHETKSCAPEDTL-GGQPIVPCGLVAWSLFNDTYDFTRNNQKLPVNKKDISWKSDRESK 195

Query:   212 FGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEEND 271
             FGK VFP NFQ G+LIGG  L++ IPLS+QEDLIVWMRTAALPTFRKLYGKI+ DL+  D
Sbjct:   196 FGKNVFPKNFQKGSLIGGKSLDQDIPLSEQEDLIVWMRTAALPTFRKLYGKIDTDLQAGD 255

Query:   272 IIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYLV 331
              I V+L+NNYNTYSF+GKKKLVLSTTSWLGG+NDFLGIAYLTVG +C FLA+SF+++YL 
Sbjct:   256 TIKVLLQNNYNTYSFNGKKKLVLSTTSWLGGRNDFLGIAYLTVGSICLFLAVSFSVLYLA 315

Query:   332 KPRRLGDPSYLSWNRNPGG 350
             KPR+LGDPSYLSWNR+ GG
Sbjct:   316 KPRQLGDPSYLSWNRSAGG 334

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

TAIR|locus:2161453 AT5G46150 "AT5G46150" [Arabidopsis thaliana (taxid:3702)]

 Score = 1019 (363.8 bits), Expect = 7.7e-103, P = 7.7e-103
 Identities = 188/315 (59%), Positives = 244/315 (77%)

Query:    36 KFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPVAN 95
             +F QQ+LPACKP+LTP  VI  F+++G  F+PIG+ +L ASRD +EI+DRY+ +CIP   
Sbjct:    28 QFKQQKLPACKPVLTPISVITVFMLMGFVFIPIGLITLRASRDAIEIIDRYDVECIPEEY 87

Query:    96 RTDKVAFI-QSNASKTCTRQIT---HMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRS 151
             RT+K+ +I  S+  K CTR +    +MK P+++YYQLDN+YQNHRRYVKSR+D+QL    
Sbjct:    88 RTNKLLYITDSSIPKNCTRYLKVQKYMKAPIFIYYQLDNYYQNHRRYVKSRSDQQLLHGL 147

Query:   152 KTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGIAWKSDRDHK 211
             + S TS CEPE+++ +G PIVPCGLIAWS+FNDT+TFSR + +L V++N IAWKSDR+HK
Sbjct:   148 EYSHTSSCEPEESS-NGLPIVPCGLIAWSMFNDTFTFSRERTKLNVSRNNIAWKSDREHK 206

Query:   212 FGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEEND 271
             FGK V+P NFQNGTLIGGA L+  IPLS QED IVWMR AAL +FRKLYG+IE DLE   
Sbjct:   207 FGKNVYPINFQNGTLIGGAKLDPKIPLSDQEDFIVWMRAAALLSFRKLYGRIEEDLEPGK 266

Query:   272 IIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYLV 331
             +++V L NNYNTYSFSG+KKL+LST++WLGG+NDFLGI YL VG     +++ F +++L 
Sbjct:   267 VVEVNLMNNYNTYSFSGQKKLILSTSNWLGGRNDFLGITYLVVGSSSIVISIIFMLLHLK 326

Query:   332 KPRRLGDPSYLSWNR 346
              PR  GD S   WN+
Sbjct:   327 NPRPYGDNS---WNK 338

GO:0003674 "molecular_function" evidence=ND

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

DICTYBASE|DDB_G0276567 DDB_G0276567 "CDC50/LEM3 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 607 (218.7 bits), Expect = 3.5e-59, P = 3.5e-59
 Identities = 146/319 (45%), Positives = 189/319 (59%)

Query:    37 FTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPVANR 96
             F QQ L A +PILTP  VI+ F+V+GI F+PIG   + +S  V+E V RY+ +  P    
Sbjct:    16 FKQQRLKAWEPILTPGPVIIAFIVIGIVFIPIGAAIINSSNKVLEHVIRYDDN--PNCQL 73

Query:    97 TDKVAFIQSNASKTCTRQITHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKT--S 154
               K        + T     T M+ PVY+YY+LDNFYQNHRRYVKSRND+QL+    T  S
Sbjct:    74 GQKCTI-----NYTLP---TEMESPVYLYYKLDNFYQNHRRYVKSRNDDQLRGIEVTDFS 125

Query:   155 ETSQCEPEDTTPDG-----KPIVPCGLIAWSLFNDTYTFSRNKRQL-TVNKNGIAWKSDR 208
             +   CEP  TT DG     K +VPCGLIA S+FND+ + +     L  + K GIAW+SD 
Sbjct:   126 KLKDCEPLITT-DGSEDVNKILVPCGLIANSVFNDSISLADASGNLINLTKKGIAWQSDI 184

Query:   209 DHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLE 268
             D KF    +P   +NG  +G  + +      + ED IVWMRTAALP F+KLY        
Sbjct:   185 DKKFKN--YP---ENG--VGVINFSNF----EDEDFIVWMRTAALPDFKKLYRIYHGQNG 233

Query:   269 E-NDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTI 327
               +  I + ++N Y   SF GKK +VLSTTSW+GGKN FLG AY+ VG +CF   + F I
Sbjct:   234 PLSGTIQIRIDNKYPVASFDGKKYVVLSTTSWIGGKNPFLGYAYIIVGIICFVQGVVFAI 293

Query:   328 VYLVKPRRLGDPSYLSWNR 346
              + + PR LG P YL WN+
Sbjct:   294 KHKISPRVLGSPKYLEWNK 312

GO:0016020 "membrane" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

ZFIN|ZDB-GENE-040704-26 tmem30aa "transmembrane protein 30Aa" [Danio rerio (taxid:7955)]

 Score = 319 (117.4 bits), Expect = 2.9e-52, Sum P(2) = 2.9e-52
 Identities = 80/189 (42%), Positives = 109/189 (57%)

Query:    37 FTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEI-VDRYETDCI-PVA 94
             F QQ LPA +PILT   V+  F ++G+ F+PIGI   + S ++ E  +D    D   P  
Sbjct:    37 FKQQRLPAWQPILTAGTVLPAFFMIGLIFIPIGIGLFVTSNNIKEFEIDYTGVDMSSPCY 96

Query:    95 NRTDKVAFIQSNASKTCTRQITHMKRP----VYVYYQLDNFYQNHRRYVKSRNDEQLK-- 148
             N     ++  S +  TCT   T + +P    V++YY L NFYQNHRRYVKSR+D QL   
Sbjct:    97 NCAQNYSW-NSTSVCTCTVPFT-LDQPFESNVFMYYGLSNFYQNHRRYVKSRDDSQLNGD 154

Query:   149 KRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDT---YTFSRNKRQLTVN--KNGIA 203
             K S  + + +CEP  T+ D KPI PCG IA SLFNDT   +    N  ++ ++  K GIA
Sbjct:   155 KSSLLNPSKECEPYRTS-DRKPIAPCGAIANSLFNDTLELFYIHPNGSKIGIHLVKTGIA 213

Query:   204 WKSDRDHKF 212
             W +D+  KF
Sbjct:   214 WWTDKHVKF 222

GO:0016020 "membrane" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-030131-5884 tmem30ab "transmembrane protein 30Ab" [Danio rerio (taxid:7955)]

 Score = 313 (115.2 bits), Expect = 2.9e-52, Sum P(2) = 2.9e-52
 Identities = 79/189 (41%), Positives = 107/189 (56%)

Query:    37 FTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEI-VDRYETDCI-PVA 94
             F QQ LPA +PILT   V+  F V+G+ F+PIGI   + S ++ E  +D   TD   P  
Sbjct:    36 FKQQRLPAWQPILTAGTVLPAFFVIGLIFIPIGIGLYVTSNNIKEFEIDYTGTDMSSPCF 95

Query:    95 NRTDKVAFIQSNASKTCTRQITHMKRP----VYVYYQLDNFYQNHRRYVKSRNDEQLK-- 148
             N +   ++  +   K CT   + + +P    V++YY L NFYQNHRRYVKSR+D QL   
Sbjct:    96 NCSQSFSWNSTTPCK-CTLSFS-LDQPFESNVFMYYGLSNFYQNHRRYVKSRDDSQLNGD 153

Query:   149 KRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDT---YTFSRN--KRQLTVNKNGIA 203
             +RS    + +CEP     D K I PCG IA S+FNDT   +    N  K Q+ + K GIA
Sbjct:   154 ERSLKEPSKECEPYRIN-DNKRIAPCGAIANSMFNDTLDLFYIDPNGTKTQIPMIKKGIA 212

Query:   204 WKSDRDHKF 212
             W +D+  KF
Sbjct:   213 WWTDKHVKF 221

GO:0016020 "membrane" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q17QL5 TMEM30A "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 309 (113.8 bits), Expect = 4.8e-52, Sum P(2) = 4.8e-52
 Identities = 78/188 (41%), Positives = 105/188 (55%)

Query:    37 FTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEI-VDRYETDCIPVAN 95
             F QQ LPA +PILT   V+ TF ++G+ F+PIGI   + S ++ EI +D   TD     N
Sbjct:    33 FKQQRLPAWQPILTAGTVLPTFFIIGLIFIPIGIGIFVTSNNIREIEIDYTGTDPSSPCN 92

Query:    96 RTDKVAFIQSNASK-TCTRQIT---HMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLK--K 149
             +      +  N +   CT   T     +  V++YY L NFYQNHRRYVKSR+D QL    
Sbjct:    93 KC-----LSPNVTPCVCTINFTLEQSFEGNVFMYYGLSNFYQNHRRYVKSRDDGQLNGDP 147

Query:   150 RSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSR--NKRQLT---VNKNGIAW 204
              +  + + +CEP     D KPI PCG IA S+FNDT    +  N   LT   + K GIAW
Sbjct:   148 SALLNPSKECEPYRRNED-KPIAPCGAIANSMFNDTLELFQVGNASDLTPIPLKKKGIAW 206

Query:   205 KSDRDHKF 212
              +D++ KF
Sbjct:   207 WTDKNVKF 214

GO:0070863 "positive regulation of protein exit from endoplasmic reticulum" evidence=IEA

GO:0036010 "protein localization to endosome" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|E2R2Z8 TMEM30A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 303 (111.7 bits), Expect = 2.0e-51, Sum P(2) = 2.0e-51
 Identities = 78/188 (41%), Positives = 104/188 (55%)

Query:    37 FTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEI-VDRYETDCIPVAN 95
             F QQ LPA +PILT   V+ TF ++G+ F+PIGI   + S ++ EI +D   TD     N
Sbjct:    33 FKQQRLPAWQPILTAGTVLPTFFIIGLIFIPIGIGIFVTSNNIREIEIDYTGTDPSSPCN 92

Query:    96 RTDKVAFIQSNASKT-CTRQIT---HMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRS 151
             +      +  N +   CT   T     +  V++YY L NFYQNHRRYVKSR+D QL   S
Sbjct:    93 KC-----LSPNVTPCICTINFTLEQSFEGNVFMYYGLSNFYQNHRRYVKSRDDSQLNGDS 147

Query:   152 KT--SETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSR--NKRQLT---VNKNGIAW 204
                 + + +CEP     D KPI PCG IA S+FNDT       N+   T   + K GIAW
Sbjct:   148 GALLNPSKECEPYRRNED-KPIAPCGAIANSMFNDTLELFLVGNESYPTPIPLKKKGIAW 206

Query:   205 KSDRDHKF 212
              +D++ KF
Sbjct:   207 WTDKNVKF 214

GO:0070863 "positive regulation of protein exit from endoplasmic reticulum" evidence=IEA

GO:0036010 "protein localization to endosome" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016020 "membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LTW0	ALIS1_ARATH	No assigned EC number	0.7203	0.9259	0.9285	no	no
Q8L8W0	ALIS5_ARATH	No assigned EC number	0.7073	0.9230	0.9257	no	no
Q9SLK2	ALIS3_ARATH	No assigned EC number	0.7294	0.9259	0.9312	yes	no
Q9SA35	ALIS4_ARATH	No assigned EC number	0.7021	0.8974	0.9375	no	no
Q8BHG3	CC50B_MOUSE	No assigned EC number	0.3333	0.8490	0.8441	yes	no
Q3MIR4	CC50B_HUMAN	No assigned EC number	0.3323	0.8632	0.8632	yes	no
Q96WW4	IVN1_SCHPO	No assigned EC number	0.3623	0.8917	0.8436	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	351
pfam03381	275	pfam03381, CDC50, LEM3 (ligand-effect modulator 3)	1e-115
COG5035	372	COG5035, CDC50, Cell cycle control protein [Cell d	6e-81

>gnl|CDD|217523 pfam03381, CDC50, LEM3 (ligand-effect modulator 3) family / CDC50 family

 Score =  335 bits (860), Expect = e-115
 Identities = 138/284 (48%), Positives = 175/284 (61%), Gaps = 26/284 (9%)

Query: 73  LLASRDVVEIVDRYETDCIPVANRTDKVAFIQSNASKTCTRQIT---HMKRPVYVYYQLD 129
           L+AS +V EI  RY+  C       +  A I S    TCT   T    MK PVY YYQL 
Sbjct: 2   LVASNNVQEIEIRYDDCCTAAPEIGESFAEIPS----TCTITFTIPEDMKGPVYFYYQLT 57

Query: 130 NFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDT-TPDGKPIVPCGLIAWSLFNDTYTF 188
           NFYQNHRRYVKSR+D+QL+ ++ + + + CEP  +   +GKPI PCGLIA S+FNDT++ 
Sbjct: 58  NFYQNHRRYVKSRSDDQLRGKAVSGDDNNCEPLRSNDYNGKPIAPCGLIANSMFNDTFSL 117

Query: 189 ---SRNKRQLTVNKNGIAWKSDRDHKFGKE-------VFPSNFQNGTLIGGAHLNESIP- 237
              +     +T++K GIAW SD++ KF          V P N++          + +IP 
Sbjct: 118 PLANNGTTNVTLDKKGIAWSSDKEKKFKNTKYNPSGTVPPPNWK-----PNYEDDHTIPD 172

Query: 238 LSKQEDLIVWMRTAALPTFRKLYGKIE-VDLEENDIIDVILENNYNTYSFSGKKKLVLST 296
               ED IVWMRTAALPTFRKLY +I+  DL       + +ENNY   SF+GKK +VLST
Sbjct: 173 NQTNEDFIVWMRTAALPTFRKLYRRIDATDLPAGTYT-IQIENNYPVSSFNGKKSIVLST 231

Query: 297 TSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYLVKPRRLGDPS 340
           TSW GGKN FLGIAYL VGG+CF L + F I +L KPR+LGD S
Sbjct: 232 TSWFGGKNPFLGIAYLVVGGICFLLGILFLIRHLFKPRKLGDHS 275

Members of this family have been predicted to contain transmembrane helices. The family member LEM3 is a ligand-effect modulator, mutation of which increases glucocorticoid receptor activity in response to dexamethasone and also confers increased activity on other intracellular receptors including the progesterone, oestrogen and mineralocorticoid receptors. LEM3 is thought to affect a downstream step in the glucocorticoid receptor pathway. Factors that modulate ligand responsiveness are likely to contribute to the context-specific actions of the glucocorticoid receptor in mammalian cells. The products of genes YNR048w, YNL323w and YCR094w (CDC50) show redundancy of function and are involved in regulation of transcription via CDC39. CDC39 (also known as NOT1) is normally a negative regulator of transcription either by affecting the general RNA polymerase II machinery or by altering chromatin structure. One function of CDC39 is to block activation of the mating response pathway in the absence of pheromone, and mutation causes arrest in G1 by activation of the pathway. It may be that the cold-sensitive arrest in G1 noticed in CDC50 mutants may be due to inactivation of CDC39. The effects of LEM3 on glucocorticoid receptor activity may also be due to effects on transcription via CDC39. Length = 275

>gnl|CDD|227368 COG5035, CDC50, Cell cycle control protein [Cell division and chromosome partitioning / Transcription / Signal transduction mechanisms]

 Score =  250 bits (641), Expect = 6e-81
 Identities = 135/365 (36%), Positives = 194/365 (53%), Gaps = 52/365 (14%)

Query: 25  PRRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVD 84
               S+RP  + F QQ L A +PIL+P+ V+    ++GI F P+G   L+AS  V E+  
Sbjct: 16  SLLKSRRPPNTAFRQQRLKAWQPILSPRTVLPLLFLIGIVFAPLGGGLLVASSSVQELTI 75

Query: 85  RYETDC----------IPVANRTD------------KVAFIQSNASKTCTRQIT---HMK 119
            Y TDC          IP                  + +  + +  + C  + T    MK
Sbjct: 76  DY-TDCMTLASDEFSDIPSEYIQFHFKKKVNVLPQWRFSTDEEDDFQKCQIRFTVPSDMK 134

Query: 120 RPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKTSET--SQCEPEDTTPDGKPIVPCGLI 177
           +PV++YY+L NFYQNHRRYVKS +++QL+  +  S+   S C+P     + K I PCGLI
Sbjct: 135 KPVFIYYRLTNFYQNHRRYVKSFDEDQLRGEALKSDDLKSNCKPLSYN-EDKIIYPCGLI 193

Query: 178 AWSLFNDTYTFSRNKRQLTVNKN----GIAWKSDRDHKFGK------EVFP-----SNFQ 222
           A S+FNDT++      + T N N    GIAW+SDR H++ K      ++ P       + 
Sbjct: 194 ANSMFNDTFSSLLTGIEDTSNYNLTTKGIAWESDR-HRYKKTKYNASDIVPPPNWAKMYP 252

Query: 223 NGTLIGGAHLNESIP-LSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILENNY 281
           +G      + +++IP LS  E+   WMRTAA P F KL  +   D+       + +  N+
Sbjct: 253 DG------YTDDNIPDLSTWEEFQNWMRTAAFPKFSKLAMRNVNDVLPPGTYQLNITLNF 306

Query: 282 NTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYLVKPRRLGDPSY 341
               F+G K +VL+T S +GGKN FLGI YL VGG+C  L L F I +L KPR++ D SY
Sbjct: 307 PVLEFNGTKSIVLTTNSVIGGKNYFLGIVYLIVGGICALLGLIFLIKWLFKPRKMADHSY 366

Query: 342 LSWNR 346
           L+WN 
Sbjct: 367 LNWNM 371

Length = 372

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	351
KOG2952	351	consensus Cell cycle control protein [Cell cycle c	100.0
COG5035	372	CDC50 Cell cycle control protein [Cell division an	100.0
PF03381	278	CDC50: LEM3 (ligand-effect modulator 3) family / C	100.0
PF01102	122	Glycophorin_A: Glycophorin A; InterPro: IPR001195	88.84

>KOG2952 consensus Cell cycle control protein [Cell cycle control, cell division, chromosome partitioning; Transcription; Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-112  Score=814.53  Aligned_cols=327  Identities=55%  Similarity=0.980  Sum_probs=299.9

Q ss_pred             CCCCCCCCCCCCCCCCCCCcccccccCCcccccchhHHHHHHHHHHHHHHHHHHhhhhhcCceEEEEEeCCCCCcCCCCC
Q 018735           17 AGSPDPPAPRRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPVANR   96 (351)
Q Consensus        17 ~~~~~~~~~~~~s~~p~~~~f~QQ~L~aw~P~lTp~~vi~~f~~igiifi~iGi~l~~~s~~v~E~~i~Yd~~c~~~~~~   96 (351)
                      .+.+|-++..+++|||++++|+|||||||||+|||++|+++||++|++|+|||++++++|++|.|++++|+ +|.+.+..
T Consensus         8 ~~~~~~~~~~~~s~rP~~t~f~QQrLpA~qPilt~~~vlp~f~i~g~vFipiGv~l~~as~~v~Ei~i~YT-dc~~~~~~   86 (351)
T KOG2952|consen    8 DVIPDLKGNRKKSRRPKNTAFKQQRLPAWQPILTPRTVLPLFFIIGVVFLPIGVGLLFASSKVIEITIRYT-DCIPTGFR   86 (351)
T ss_pred             cccccccchhhhccCCccccchhccccccccccCcchHHHHHHHHHHHHHhhhhheeEeecceEEEEEecc-cCcccccc
Confidence            34566777778899999999999999999999999999999999999999999999999999999999995 79887666


Q ss_pred             CCceeeeecCC--CceeEEEec---cCCCceEEEEEecchhhhhhhhhhCCChhhhcCcCCC-CCCCCCCCcccCCCCCe
Q 018735           97 TDKVAFIQSNA--SKTCTRQIT---HMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKT-SETSQCEPEDTTPDGKP  170 (351)
Q Consensus        97 ~~~~~~~~~~~--~~~C~i~f~---~m~~pVyvYY~L~NFyQNHRrYv~S~s~~QL~G~~~~-~~~~~C~P~~~~~~g~~  170 (351)
                      +.+.++++...  .+.|+++|+   +|++|||+||+|+|||||||||++|||++||+|+... ...++|.|++++.+|++
T Consensus        87 ~~~~~~~~~~~~~~~~C~~~f~vp~~~k~pVy~YY~L~nfyQNhRRYvkSr~d~QL~G~~~~~~~~~~C~Pl~~~~~~kp  166 (351)
T KOG2952|consen   87 TNPSEYIQGHFDQTKSCTITFTVPKDMKGPVYLYYELTNFYQNHRRYVKSRDDKQLRGEPSKELNVKSCAPLEYNEGGKP  166 (351)
T ss_pred             ccchhhhhcccCcccceEEEEEccccCCCCEEEEEehhHHHHHHHHHHhcccHHHhcCCCccccCccCCCcceecCCCce
Confidence            66666665433  367999998   9999999999999999999999999999999999753 34566999999777799


Q ss_pred             eecchhhhhccccceeecccCCc---cceeeeccccCCcccccccCCCCC-------CCCCCCCcccCCcccCCCCCCCC
Q 018735          171 IVPCGLIAWSLFNDTYTFSRNKR---QLTVNKNGIAWKSDRDHKFGKEVF-------PSNFQNGTLIGGAHLNESIPLSK  240 (351)
Q Consensus       171 i~PCGliA~S~FNDtF~l~~~~~---~~~~~~~gIaW~sD~~~kF~~~~~-------p~~w~~~~~~~~~~~~~~~~~~~  240 (351)
                      |+||||||||||||||++...++   .++++++||||++|+ +||+++.+       |+||++..+.|+ ..|++.++.+
T Consensus       167 i~PCGlIAnSlFNDTf~~~~~~~~~~~~~l~~kgIaW~sDk-~kf~~p~~n~~~~~pPpnW~k~~~~gg-~~d~n~pl~~  244 (351)
T KOG2952|consen  167 IYPCGLIANSLFNDTFELSLTNDGDSDYPLTTKGIAWESDK-HKFRKPIYNASGIVPPPNWQKGYPEGG-YTDDNIPLSE  244 (351)
T ss_pred             eeecchhcchhcccccchhcccCCCccceeccCCccchhhh-hhhcCCCCccccccCCccccccCCcCC-cCCCCCCchh
Confidence            99999999999999999976543   789999999999999 99998655       999999999887 6777778999


Q ss_pred             chhHHHHHhcCCCchhHHhhhccccc-CCCCCEEEEEEeeeecCcccCceEEEEEEeccccCcCCcchhHHHHHHHHHHH
Q 018735          241 QEDLIVWMRTAALPTFRKLYGKIEVD-LEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCF  319 (351)
Q Consensus       241 ne~FivWMr~Aalp~FrKLYg~i~~~-L~~G~~y~v~I~nnypv~~F~G~K~ivlst~Sw~GgkN~fLgi~yivvG~i~~  319 (351)
                      ||+||||||+||||+||||||||+++ |++| +|++.|++||||+.|+|+|++||+|+||+||||+||||+|||||++|+
T Consensus       245 nedfivWMRtAAlPtFrKLy~~i~~~gL~~G-~y~l~i~~Nypv~sf~G~K~~vlst~SwlGgkN~FLgI~YLvVG~ic~  323 (351)
T KOG2952|consen  245 NEDFIVWMRTAALPTFRKLYRIIESNGLPKG-TYQLNITNNYPVRSFNGKKKFVLSTTSWLGGKNPFLGIAYLVVGSICI  323 (351)
T ss_pred             hHHHHHHHHhcccchHHHHHhhhccCCCCCc-eEEEEEecccceeecCCceEEEEeeccccccCCccceehHHHHHHHHH
Confidence            99999999999999999999999986 9999 799999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCCCCCcccccCCC
Q 018735          320 FLALSFTIVYLVKPRRLGDPSYLSWNRN  347 (351)
Q Consensus       320 ~~~i~fli~~~~~pr~lgD~~~L~w~~~  347 (351)
                      ++|++|+++|+++||++||+++|+|++.
T Consensus       324 ~l~~~f~~~~l~~~r~~~d~~~l~~~~~  351 (351)
T KOG2952|consen  324 LLGLIFLVIYLFKPRRLGDPSYLSWNRS  351 (351)
T ss_pred             HHHHHHHHHHhhcccccCCccccccccC
Confidence            9999999999999999999999999974

>COG5035 CDC50 Cell cycle control protein [Cell division and chromosome partitioning / Transcription / Signal transduction mechanisms]

Probab=100.00  E-value=3.9e-99  Score=708.96  Aligned_cols=319  Identities=41%  Similarity=0.714  Sum_probs=281.4

Q ss_pred             CCCCCCCCCCCCcccccccCCcccccchhHHHHHHHHHHHHHHHHHHhhhhhcCceEEEEEeCCCCCcCCCCC------C
Q 018735           24 APRRSSKRPKYSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPVANR------T   97 (351)
Q Consensus        24 ~~~~~s~~p~~~~f~QQ~L~aw~P~lTp~~vi~~f~~igiifi~iGi~l~~~s~~v~E~~i~Yd~~c~~~~~~------~   97 (351)
                      +...++|||.+++|+|||||||||++||+.|+++||++|++|.|||+.+++++.+|+|++|+|+ +|...+..      .
T Consensus        15 ~~~~k~r~p~nt~F~QQrL~awqpilsp~~vLpL~flig~vf~plG~gl~~~~s~VqeltI~Yt-dc~t~as~~f~~iPs   93 (372)
T COG5035          15 PSLLKSRRPPNTAFRQQRLKAWQPILSPRTVLPLLFLIGIVFAPLGGGLLVASSSVQELTIDYT-DCMTLASDEFSDIPS   93 (372)
T ss_pred             cccccccCCchhhHHHhhccccccccCchHHHHHHHHHHHHHhhccceEEEEeeeeeeeeeccc-ccccccchhhhhCch
Confidence            3455789999999999999999999999999999999999999999999999999999999998 58765521      1


Q ss_pred             Cceeee--------------ecC--CCceeEEEec---cCCCceEEEEEecchhhhhhhhhhCCChhhhcCcCCC--CCC
Q 018735           98 DKVAFI--------------QSN--ASKTCTRQIT---HMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKT--SET  156 (351)
Q Consensus        98 ~~~~~~--------------~~~--~~~~C~i~f~---~m~~pVyvYY~L~NFyQNHRrYv~S~s~~QL~G~~~~--~~~  156 (351)
                      +.+.+.              .++  +...|++.|+   +||.|||+||+|+|||||||||++|.|.+||+|+...  ...
T Consensus        94 ~~~~~~f~~~~~~~pqW~~~~~~~~d~~~C~irf~vp~~~k~~vfiyyrl~nFyQNhrRY~~S~d~dQl~Ge~~~~~~l~  173 (372)
T COG5035          94 EYIQFHFKKKVNVLPQWRFSTDEEDDFQKCQIRFTVPSDMKKPVFIYYRLTNFYQNHRRYVKSFDEDQLRGEALKSDDLK  173 (372)
T ss_pred             hheeeeeecccccccceeecccccCCcceeEEEEEchhhcccceeeeehhHHHHHhhHHHHhccCHHHhcCccccccccc
Confidence            112211              111  1357999998   9999999999999999999999999999999999654  223


Q ss_pred             CCCCCcccCCCCCeeecchhhhhccccceeecccC----CccceeeeccccCCcccccccCCC-------CCCCCCCCCc
Q 018735          157 SQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRN----KRQLTVNKNGIAWKSDRDHKFGKE-------VFPSNFQNGT  225 (351)
Q Consensus       157 ~~C~P~~~~~~g~~i~PCGliA~S~FNDtF~l~~~----~~~~~~~~~gIaW~sD~~~kF~~~-------~~p~~w~~~~  225 (351)
                      +.|.|+++ .++|+||||||||||||||||+....    ++.+.++.+||||++|+ ++|+++       ++||||.+.+
T Consensus       174 ~nC~PL~~-nedK~~YPcGLIaNSmfNDtf~~~l~~i~Dts~Y~lttkgIaW~sDr-~rykktkYn~sdIvpPPnW~k~y  251 (372)
T COG5035         174 SNCKPLSY-NEDKIIYPCGLIANSMFNDTFSSLLTGIEDTSNYNLTTKGIAWESDR-HRYKKTKYNASDIVPPPNWAKMY  251 (372)
T ss_pred             ccCCcccc-cCCCeeecccccccccccccchhhccccccccccccccCCccchhhc-ccccCCCCChhhcCCCCchHhhC
Confidence            68999998 45699999999999999999987542    45689999999999999 688764       6799999998


Q ss_pred             ccCCcccCCCCCCCCchhHHHHHhcCCCchhHHhhhcccc-cCCCCCEEEEEEeeeecCcccCceEEEEEEeccccCcCC
Q 018735          226 LIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGKIEV-DLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKN  304 (351)
Q Consensus       226 ~~~~~~~~~~~~~~~ne~FivWMr~Aalp~FrKLYg~i~~-~L~~G~~y~v~I~nnypv~~F~G~K~ivlst~Sw~GgkN  304 (351)
                      +.|+.+ ++-++++++|+|+||||+||||+|+||++|.+. .|++| +|+++|+.||||..|+|+|+|||+|.|.+||||
T Consensus       252 pdGYtd-~NiPDls~wE~Fq~WMrtAafP~F~KLa~~N~~d~l~~G-~Y~lnI~l~fPv~~f~GtKsi~Ltt~SviGgkN  329 (372)
T COG5035         252 PDGYTD-DNIPDLSTWEEFQNWMRTAAFPKFSKLAMRNVNDVLPPG-TYQLNITLNFPVLEFNGTKSIVLTTNSVIGGKN  329 (372)
T ss_pred             CCCCCc-cCCCcchhHHHHHHHhhcccCchHHHHhcccccccCCCc-eEEEEEEeecceeecCCceEEEEEecccccCCC
Confidence            887653 334668899999999999999999999999975 69999 699999999999999999999999999999999


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCC
Q 018735          305 DFLGIAYLTVGGLCFFLALSFTIVYLVKPRRLGDPSYLSWNRN  347 (351)
Q Consensus       305 ~fLgi~yivvG~i~~~~~i~fli~~~~~pr~lgD~~~L~w~~~  347 (351)
                      +||||+|||||++|.++|++|++.++++||+|||++||+|+++
T Consensus       330 ~fLGI~ylivg~ical~~~if~~~~~f~pR~~~Dh~yLnw~~~  372 (372)
T COG5035         330 YFLGIVYLIVGGICALLGLIFLIKWLFKPRKMADHSYLNWNME  372 (372)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHhhCCcccCCcccccccCC
Confidence            9999999999999999999999999999999999999999974

>PF03381 CDC50: LEM3 (ligand-effect modulator 3) family / CDC50 family; InterPro: IPR005045 Members of this family have no known function

Probab=100.00  E-value=4.1e-83  Score=611.74  Aligned_cols=259  Identities=53%  Similarity=0.870  Sum_probs=222.3

Q ss_pred             hhhhcCceEEEEEeCCCCCcCCCCCCCceeeeecCCCceeEEEec---cCCCceEEEEEecchhhhhhhhhhCCChhhhc
Q 018735           72 SLLASRDVVEIVDRYETDCIPVANRTDKVAFIQSNASKTCTRQIT---HMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLK  148 (351)
Q Consensus        72 l~~~s~~v~E~~i~Yd~~c~~~~~~~~~~~~~~~~~~~~C~i~f~---~m~~pVyvYY~L~NFyQNHRrYv~S~s~~QL~  148 (351)
                      |++++++|+|++++||+.|.....    .........++|.++|+   +|++||||||||+|||||||||++|||++||+
T Consensus         1 ll~~s~~v~E~~~~Yd~~~~~~~~----~~~~~~~~~~~c~v~f~i~~~~~~pVyvYY~L~nFYQNhr~y~~S~~~~QL~   76 (278)
T PF03381_consen    1 LLVASNSVVEIEIRYDDCCDCQNC----YINEFSPIPCTCSVTFNIPEDMKGPVYVYYELTNFYQNHRRYVKSRSDSQLK   76 (278)
T ss_pred             CEEEeCCEEEEEEECCCCCCCCCc----cccccCCCCceEEEEEEcCccCCCCEEEEEEEehhhHHhHHHHhcCCHHHhC
Confidence            578899999999999988765221    00000111358999987   89999999999999999999999999999999


Q ss_pred             CcCCC-CCCCCCCCcccC--CCCCeeecchhhhhccccceeeccc----CCccceeeeccccCCcccccccCCC------
Q 018735          149 KRSKT-SETSQCEPEDTT--PDGKPIVPCGLIAWSLFNDTYTFSR----NKRQLTVNKNGIAWKSDRDHKFGKE------  215 (351)
Q Consensus       149 G~~~~-~~~~~C~P~~~~--~~g~~i~PCGliA~S~FNDtF~l~~----~~~~~~~~~~gIaW~sD~~~kF~~~------  215 (351)
                      |+... ++.++|+|+++.  .++++++||||||||||||||+|..    .++.++|+++||+|++|++.+|+++      
T Consensus        77 G~~~~~~~~~~C~p~~~~~~~~~~~~~PCGliA~S~FNDtF~l~~~~~~~~~~~~~~~~gIaw~~d~~~~fk~~~~~~~~  156 (278)
T PF03381_consen   77 GKIVSKSDLSDCDPLRTNNENNGKIIYPCGLIANSMFNDTFSLYRRNSGNNENIPLDETGIAWSSDRESKFKNPHYNNSN  156 (278)
T ss_pred             CCccccCCCCCCCCceeccCCCCCEeecccHhHhhhccceEEeeecccCCCceeeeecccccCchHHHHhcCCCCCcccc
Confidence            99743 446799999984  4788999999999999999999973    3467899999999999999999873      


Q ss_pred             -CCCCCCCCCcccCCcccCCCCC-CCCchhHHHHHhcCCCchhHHhhhcc-cccCCCCCEEEEEEeeeecCcccCceEEE
Q 018735          216 -VFPSNFQNGTLIGGAHLNESIP-LSKQEDLIVWMRTAALPTFRKLYGKI-EVDLEENDIIDVILENNYNTYSFSGKKKL  292 (351)
Q Consensus       216 -~~p~~w~~~~~~~~~~~~~~~~-~~~ne~FivWMr~Aalp~FrKLYg~i-~~~L~~G~~y~v~I~nnypv~~F~G~K~i  292 (351)
                       ++|++|...     .+.+...+ ..+|||||||||+||||+|||||||| +++|++|+ |+|+|+|||||+.|+|+|+|
T Consensus       157 ~~~~~~W~~~-----~~~~~~~p~~~~ne~fivWMr~a~lp~FrKLYg~i~~~~L~~G~-y~i~I~nnypv~~f~G~K~i  230 (278)
T PF03381_consen  157 TVPPPNWRPG-----YENDTPWPDNSENEHFIVWMRPAALPTFRKLYGRIDNDDLPAGN-YTIDITNNYPVSSFGGKKSI  230 (278)
T ss_pred             ccCCCceeee-----ccCCCCCCcccccHHHHHHhccccCCCeeEeEeeeccCCCCCce-EEEEEEEeecccccCcEEEE
Confidence             347777431     12233233 34699999999999999999999999 89999995 99999999999999999999


Q ss_pred             EEEeccccCcCCcchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCc
Q 018735          293 VLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYLVKPRRLGDPS  340 (351)
Q Consensus       293 vlst~Sw~GgkN~fLgi~yivvG~i~~~~~i~fli~~~~~pr~lgD~~  340 (351)
                      ||+|+||+||||+||||+|||||+||+++|++|++.|+++||+|||++
T Consensus       231 vlst~s~~Ggkn~~Lgi~ylvvg~i~~v~~i~~~~~~~~~~r~~gD~~  278 (278)
T PF03381_consen  231 VLSTTSWFGGKNYFLGIAYLVVGGICLVLAIIFLIIHYFKPRKLGDTS  278 (278)
T ss_pred             EEEeccccCccccHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            999999999999999999999999999999999999999999999985

They have predicted transmembrane helices.; GO: 0016020 membrane

>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane

Probab=88.84  E-value=0.38  Score=41.16  Aligned_cols=27  Identities=15%  Similarity=0.255  Sum_probs=20.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 018735          308 GIAYLTVGGLCFFLALSFTIVYLVKPR  334 (351)
Q Consensus       308 gi~yivvG~i~~~~~i~fli~~~~~pr  334 (351)
                      .|+.||+|+++-++++++|+.++++.|
T Consensus        65 ~i~~Ii~gv~aGvIg~Illi~y~irR~   91 (122)
T PF01102_consen   65 AIIGIIFGVMAGVIGIILLISYCIRRL   91 (122)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceeehhHHHHHHHHHHHHHHHHHHHHH
Confidence            367788888888888888877777543

Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00