Citrus Sinensis ID: 018737
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 351 | ||||||
| 317106736 | 444 | JHL06P13.13 [Jatropha curcas] | 0.988 | 0.781 | 0.864 | 0.0 | |
| 224073734 | 437 | predicted protein [Populus trichocarpa] | 0.997 | 0.800 | 0.82 | 1e-176 | |
| 356519361 | 386 | PREDICTED: DUF246 domain-containing prot | 1.0 | 0.909 | 0.826 | 1e-176 | |
| 449436132 | 441 | PREDICTED: DUF246 domain-containing prot | 1.0 | 0.795 | 0.817 | 1e-175 | |
| 255553137 | 441 | conserved hypothetical protein [Ricinus | 0.965 | 0.768 | 0.846 | 1e-174 | |
| 297743429 | 443 | unnamed protein product [Vitis vinifera] | 1.0 | 0.792 | 0.810 | 1e-174 | |
| 225443013 | 476 | PREDICTED: DUF246 domain-containing prot | 1.0 | 0.737 | 0.810 | 1e-174 | |
| 356528958 | 440 | PREDICTED: DUF246 domain-containing prot | 1.0 | 0.797 | 0.803 | 1e-172 | |
| 5903043 | 399 | Similar to gb|X80301 auxin-independent g | 1.0 | 0.879 | 0.789 | 1e-169 | |
| 42571835 | 351 | O-fucosyltransferase family protein [Ara | 1.0 | 1.0 | 0.789 | 1e-169 |
| >gi|317106736|dbj|BAJ53232.1| JHL06P13.13 [Jatropha curcas] | Back alignment and taxonomy information |
|---|
Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 300/347 (86%), Positives = 324/347 (93%)
Query: 5 FCDGVGVAHLLNATLVLPKFEVAAYWNESSDFADIFEADYFIQHMDGFVKVVKELPPEIS 64
FCDGVG+A LLNATLVLPKFE AAYWNESS FAD+F+ DYFIQ + GFVKVVK+LPPEI+
Sbjct: 98 FCDGVGIARLLNATLVLPKFEAAAYWNESSGFADVFDVDYFIQQVKGFVKVVKDLPPEIA 157
Query: 65 SKEPFHVDCSKRKGQFDYVESVLPALLEHKYISLTPAMSQRRDRYPRFAKAALCQACYSA 124
SKEPFHVDCSKRKGQFDY+ESVLP+LLEH YIS+TPAMSQRRDRYP +AKAALCQACYSA
Sbjct: 158 SKEPFHVDCSKRKGQFDYIESVLPSLLEHHYISITPAMSQRRDRYPSYAKAALCQACYSA 217
Query: 125 LRLTRSLQKKAAELLEAIPKPFLSLHLRFEPDMVAYSQCEYQGLSPTSMQAIEAARGDRK 184
LRLTRSL+KKA+ELLEAIPKPFLSLHLRFEPDMVAYSQCEY GLSP SM+AIEAAR RK
Sbjct: 218 LRLTRSLEKKASELLEAIPKPFLSLHLRFEPDMVAYSQCEYLGLSPASMEAIEAARDYRK 277
Query: 185 PWTGEVAHIWRRRGKCPLTPNETALILQALSIPTNTNIYLAAGDGLMEIEGLTSVYTNVV 244
PWTGE A IWR+RGKCPLTPNETALILQALSIPTNTNIYLAAGDGLMEIEGLTS+YTNV
Sbjct: 278 PWTGESARIWRKRGKCPLTPNETALILQALSIPTNTNIYLAAGDGLMEIEGLTSIYTNVF 337
Query: 245 TKSALRTGEDFTRMHGNTKAALDYYVSINSDSYMATYFGNMDKMVAAMRAFKGLYKTLFL 304
K+ L + EDFT MHGNTKAALDYYVSINSDSYMATYFGNMDKMVAAMRA+KGLYKTLFL
Sbjct: 338 NKATLLSSEDFTSMHGNTKAALDYYVSINSDSYMATYFGNMDKMVAAMRAYKGLYKTLFL 397
Query: 305 SRKAFAEFTYQGLEGKELMQALWKVHRDDFLMGRGSALPDCFCEFEL 351
SR+AFAEFT+Q L+GKELMQALWK H +DF+MGRGSALPDCFCEF+L
Sbjct: 398 SRRAFAEFTFQSLKGKELMQALWKTHEEDFVMGRGSALPDCFCEFKL 444
|
Source: Jatropha curcas Species: Jatropha curcas Genus: Jatropha Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224073734|ref|XP_002304147.1| predicted protein [Populus trichocarpa] gi|222841579|gb|EEE79126.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|356519361|ref|XP_003528341.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|449436132|ref|XP_004135848.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis sativus] gi|449530766|ref|XP_004172363.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|255553137|ref|XP_002517611.1| conserved hypothetical protein [Ricinus communis] gi|223543243|gb|EEF44775.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|297743429|emb|CBI36296.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|225443013|ref|XP_002267150.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356528958|ref|XP_003533064.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|5903043|gb|AAD55602.1|AC008016_12 Similar to gb|X80301 auxin-independent growth promoter (axi 1) from Nicotiana tabacum. EST gb|AA605466 comes from this gene [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|42571835|ref|NP_974008.1| O-fucosyltransferase family protein [Arabidopsis thaliana] gi|332194711|gb|AEE32832.1| O-fucosyltransferase family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 351 | ||||||
| TAIR|locus:2035084 | 439 | AT1G52630 [Arabidopsis thalian | 1.0 | 0.799 | 0.789 | 8.2e-154 | |
| TAIR|locus:2076552 | 512 | AT3G02250 [Arabidopsis thalian | 0.931 | 0.638 | 0.336 | 1.6e-47 | |
| TAIR|locus:2143181 | 508 | AT5G15740 [Arabidopsis thalian | 0.905 | 0.625 | 0.333 | 3.4e-45 | |
| TAIR|locus:2009467 | 565 | AT1G22460 [Arabidopsis thalian | 0.871 | 0.541 | 0.329 | 2.5e-43 | |
| TAIR|locus:2157096 | 652 | AT5G35570 [Arabidopsis thalian | 0.940 | 0.506 | 0.325 | 1.3e-41 | |
| TAIR|locus:2080285 | 638 | AT3G54100 [Arabidopsis thalian | 0.971 | 0.534 | 0.318 | 1.9e-40 | |
| TAIR|locus:2014869 | 499 | AT1G14020 [Arabidopsis thalian | 0.880 | 0.619 | 0.326 | 2.6e-40 | |
| TAIR|locus:2150129 | 631 | FRB1 "FRIABLE 1" [Arabidopsis | 0.874 | 0.486 | 0.343 | 2.9e-40 | |
| TAIR|locus:2065563 | 638 | AT2G37980 [Arabidopsis thalian | 0.874 | 0.481 | 0.331 | 4.3e-40 | |
| TAIR|locus:2130938 | 549 | AT4G16650 [Arabidopsis thalian | 0.851 | 0.544 | 0.333 | 5.3e-40 |
| TAIR|locus:2035084 AT1G52630 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1500 (533.1 bits), Expect = 8.2e-154, P = 8.2e-154
Identities = 277/351 (78%), Positives = 311/351 (88%)
Query: 1 MRRDFCDGVGVAHLLNATLVLPKFEVAAYWNESSDFADIFEADYFIQHMDGFVKVVKELP 60
MRRD CDGVG+A LLNATLVLPKFEVAAYWNESS FAD+F+ DYFIQ M G+++VVKELP
Sbjct: 89 MRRDLCDGVGIARLLNATLVLPKFEVAAYWNESSGFADVFDVDYFIQKMSGYIEVVKELP 148
Query: 61 PEISSKEPFHVDCSKRKGQFDYVESVLPALLEHKYISLTPAMSQRRDRYPRFAKAALCQA 120
+I+SKEPF VDCSKRKGQFDY+ESVLP LLEH YIS TPAMSQRRDRYP +A+A LCQA
Sbjct: 149 KDIASKEPFKVDCSKRKGQFDYIESVLPLLLEHHYISFTPAMSQRRDRYPEYARATLCQA 208
Query: 121 CYSALRLTRSLQKKAAELLEAIPKPFLSLHLRFEPDMVAYSQCEYQGLSPTSMQAIEAAR 180
CYSA+ LT SL+KKA EL +AIPKPFLSLHLRFEPDMVAYSQCEY LSP+S+ AIEAAR
Sbjct: 209 CYSAIHLTSSLEKKAVELFDAIPKPFLSLHLRFEPDMVAYSQCEYPNLSPSSIAAIEAAR 268
Query: 181 GDRKPWTGEVAHIWRRRGKCPLTPNETALILQALSIPTNTNIYLAAGDGLMEIEGLTSVY 240
DRKPWTGE+A WR+RGKCPLTPNET L+LQ+L+IPT+TNIYLAAGDGLME+EG TSVY
Sbjct: 269 ADRKPWTGELAQTWRKRGKCPLTPNETVLMLQSLNIPTSTNIYLAAGDGLMEMEGFTSVY 328
Query: 241 TNVVTKSALRTGEDFTRMHGNTKAALDYYVSINSDSYMATYFGNMDKMVAAMRAFKGLYK 300
TNV TKS L EDFTRMHGNTKAALDY+VSINSD+Y+ATYFGNMDK+VAAMR +K ++
Sbjct: 329 TNVFTKSVLLNQEDFTRMHGNTKAALDYHVSINSDAYVATYFGNMDKIVAAMRTYKQMHN 388
Query: 301 TLFLSRKAFAEFTYQGLEGKELMQALWKVHRDDFLMGRGSALPDCFCEFEL 351
TLFLSRKAFAE T QGLEG EL +ALW+VH+ DF +GRG ALPDCFCEFEL
Sbjct: 389 TLFLSRKAFAELTSQGLEGAELKKALWEVHKSDFAIGRGFALPDCFCEFEL 439
|
|
| TAIR|locus:2076552 AT3G02250 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2143181 AT5G15740 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2009467 AT1G22460 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2157096 AT5G35570 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2080285 AT3G54100 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2014869 AT1G14020 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2150129 FRB1 "FRIABLE 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2065563 AT2G37980 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2130938 AT4G16650 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 351 | |||
| cd11299 | 290 | cd11299, O-FucT_plant, GDP-fucose protein O-fucosy | 1e-105 | |
| pfam10250 | 315 | pfam10250, O-FucT, GDP-fucose protein O-fucosyltra | 1e-79 | |
| cd11296 | 206 | cd11296, O-FucT_like, GDP-fucose protein O-fucosyl | 1e-05 |
| >gnl|CDD|211385 cd11299, O-FucT_plant, GDP-fucose protein O-fucosyltransferase, plant specific subfamily | Back alignment and domain information |
|---|
Score = 310 bits (796), Expect = e-105
Identities = 115/312 (36%), Positives = 162/312 (51%), Gaps = 45/312 (14%)
Query: 1 MRRDFCDGVGVAHLLNATLVLPKFEVAAYWNESSDFADIFEADYFIQHMDGFVKVVKELP 60
R CD V VA LLNATLVLP+ + + W +SS F DI++ D+FI+ + V+VVK+LP
Sbjct: 13 QRSQICDAVAVARLLNATLVLPELDKNSVWGDSSKFGDIYDVDHFIKSLKDDVRVVKKLP 72
Query: 61 PEISSKEP--FHVDCSKRKGQFDYVESVLPALLEHKYISLTPAMSQRRDRY-PRFAKAAL 117
E++SK+P R Y+E VLP L +H I L P S+ + P +
Sbjct: 73 EELASKKPEITVKRVPSRSSPSYYLEEVLPLLKKHGVIRLAPFDSRLANDLLPPEIQRLR 132
Query: 118 CQACYSALRLTRSLQKKAAELLEAIPK---PFLSLHLRFEPDMVAYSQCEYQGLSPTSMQ 174
C+ + ALR +++ +L++ + + PFL+LHLRFE DM+A+S C
Sbjct: 133 CRVNFHALRFVPEIEELGDKLVDRLREAGGPFLALHLRFEKDMLAFSGC----------- 181
Query: 175 AIEAARGDRKPWTGEVAHIWRRRGKCPLTPNETALILQALSIPTNTNIYLAAGD---GLM 231
GKCPLTP E L+L+AL P +T IYLAAG+ G
Sbjct: 182 -----------------------GKCPLTPEEVGLLLRALGFPRSTRIYLAAGEIYGGER 218
Query: 232 EIEGLTSVYTNVVTKSALRTGED--FTRMHGNTKAALDYYVSINSDSYMATYFGNMDKMV 289
++ L S++ N+ TK L T E+ H + AALDY V + SD ++ TY GN K V
Sbjct: 219 RLDPLRSIFPNLYTKETLATAEELAPFSGHSSRLAALDYIVCLESDVFVPTYGGNFAKAV 278
Query: 290 AAMRAFKGLYKT 301
A R + G KT
Sbjct: 279 AGHRRYLGHRKT 290
|
Some members of this plant-specific family of O-fucosyltransferases have been annotated as auxin-independent growth promotors. The function of the protein seems unclear. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. Length = 290 |
| >gnl|CDD|220652 pfam10250, O-FucT, GDP-fucose protein O-fucosyltransferase | Back alignment and domain information |
|---|
| >gnl|CDD|211383 cd11296, O-FucT_like, GDP-fucose protein O-fucosyltransferase and related proteins | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 351 | |||
| PF10250 | 351 | O-FucT: GDP-fucose protein O-fucosyltransferase; I | 100.0 | |
| KOG3849 | 386 | consensus GDP-fucose protein O-fucosyltransferase | 95.11 | |
| PF05830 | 321 | NodZ: Nodulation protein Z (NodZ); InterPro: IPR00 | 95.05 | |
| KOG3705 | 580 | consensus Glycoprotein 6-alpha-L-fucosyltransferas | 82.63 |
| >PF10250 O-FucT: GDP-fucose protein O-fucosyltransferase; InterPro: IPR019378 This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-50 Score=391.06 Aligned_cols=284 Identities=27% Similarity=0.405 Sum_probs=194.0
Q ss_pred CchhhhHHHHHHHHhcceEEecccccccccCCCCC-----CCCcCcHHHHHHhccCceEEeecCCccccCCCc-------
Q 018737 1 MRRDFCDGVGVAHLLNATLVLPKFEVAAYWNESSD-----FADIFEADYFIQHMDGFVKVVKELPPEISSKEP------- 68 (351)
Q Consensus 1 ~R~~IcdaV~vArlLnATLVlP~l~~~~~w~d~s~-----F~dIfD~dhFI~sL~~dVrIvk~LP~~~~~~~~------- 68 (351)
||+++++||++|++||+|||||.+...+.|++.++ |+++||++||+++++++|.+.+.+|..+.....
T Consensus 13 Qr~~~~~a~~~A~~LnRTLVLPp~~~~~~~~~~~~~~~ipf~~~fD~~~l~~~~~~vi~~~ef~~~~~~~~~~~~~~~~~ 92 (351)
T PF10250_consen 13 QRMGFENAVVFAKALNRTLVLPPFIKHYHWKDQSKQRHIPFSDFFDVEHLRKFLRPVITMEEFLPKHWDEVFRLQYCWSP 92 (351)
T ss_dssp HHHHHHHHHHHHHHHT-EEE--EEEEESSSS----EEEEEHHHHB-HHHHTTTS--EE-HHHHHHHHS-GGG-EEEESS-
T ss_pred HHHHHHHHHHHHHHhCCEEEcCCccccccccccccccccChhhhccHHHHHHHhhCceehheeccchhccccchhhcccc
Confidence 68999999999999999999999999999999887 999999999999999999999999865543211
Q ss_pred ------------------------ceecccC-CCCccchHHhhhHhhhhc------ceEEEccccccccc-CChhhhhhh
Q 018737 69 ------------------------FHVDCSK-RKGQFDYVESVLPALLEH------KYISLTPAMSQRRD-RYPRFAKAA 116 (351)
Q Consensus 69 ------------------------~~i~~~~-~~s~~~Y~~~vlp~l~k~------~vi~~~~~~~~l~~-~~P~~~q~l 116 (351)
....... +.++.+|+++++|.+.++ +++.|.++...+.+ ..+.++|+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~r- 171 (351)
T PF10250_consen 93 WESGSWDDNMKDGNPFGPFWDKFPIKFDPCEFWSSPSLYLEDVLPELREWNENSEHPVIAFTGFESRLPDNYLDRDLQR- 171 (351)
T ss_dssp B--------TTSSTTHHHHHHHTT---SEEE-E-TTSTTTT-STTHHHHHHHHTT-SEEEESS-SS-SS--GGGGGGGG-
T ss_pred cccccchhhccccccccccccccceeeccccccCCchhhHHHhhhHHhhhccccccccceeccccccchhcccCccceE-
Confidence 0011111 234557788899999886 99999999888764 47777776
Q ss_pred hHHhhcccccccHHHHHHHHHHHHhcC---CCeeEeeeccchhhhhhcccccCCCChhHHHHHHHHhcCCCCCCchhhhh
Q 018737 117 LCQACYSALRLTRSLQKKAAELLEAIP---KPFLSLHLRFEPDMVAYSQCEYQGLSPTSMQAIEAARGDRKPWTGEVAHI 193 (351)
Q Consensus 117 RCrvnf~ALrF~~~I~~lg~~lv~rl~---~~fiAlHLR~E~Dmla~s~C~~~g~~~~e~~~l~~~R~~~~~w~~~~~~~ 193 (351)
+|+|+++|+++|+++++++. ++|||+|||+|+|| +++|.+ ++ +...|+.+|.. ..+......
T Consensus 172 -------~l~~~~~i~~~a~~~i~~~~~~~~~yiavHlR~~~D~--~~~C~~-~~---~~~~~~~~~~~--~~~~~~~~~ 236 (351)
T PF10250_consen 172 -------YLRFSPEIRELADKFIKRLLAGGGPYIAVHLRRGKDW--FSACEF-KG---ERHLLASPRCW--GKKSINPEK 236 (351)
T ss_dssp -------G--B-HHHHHHHHHHHHHH----SSEEEEEE--SHHH--HHHHCT--T-------TTTHHHH---GGGTT---
T ss_pred -------EEecCHHHHHHHHHHHHHhhcccCceEEEeecccCch--Hhhccc-CC---chHHHHHhHhh--ccccccchh
Confidence 99999999999999999987 89999999999999 899997 44 55666666642 001112346
Q ss_pred hhcCCCCCCCHHHHHHHHHHcCCCCCcEEEEeecC---CcchhhhHHHhccccccccCCCChhhhccccCCcccceeeEE
Q 018737 194 WRRRGKCPLTPNETALILQALSIPTNTNIYLAAGD---GLMEIEGLTSVYTNVVTKSALRTGEDFTRMHGNTKAALDYYV 270 (351)
Q Consensus 194 ~R~~G~CPLtPeEvgl~L~alGf~~~T~IYlA~g~---g~~~l~~L~~~fP~~~tKe~L~~~~el~~~~~~~~aAlDy~V 270 (351)
.+..+.||++|++++.+++++|+.+.|.||||+++ |...|++|++.||++++|+++.+.+|++++.++++|+||++|
T Consensus 237 ~~~~~~~p~~~~~~~~i~~~~~~~~~~~vYiAtd~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~vD~~i 316 (351)
T PF10250_consen 237 KRRNGCCPSTPQEAKQILRALGKNNTTVVYIATDEIYGGERRLDPLKNMFPNVVTKDDLLSHEELEPLNDDQLAMVDQEI 316 (351)
T ss_dssp --HHHHS--HHHHHHHHHHHHHHHT-SEEEEEESS-----------HHHHHHHHGGGT--EE--S-----S--HHHHHHH
T ss_pred hhhcCCCCChHHHHHHHHHHhccCCCCEEEEecCcccccchhHHHHHHHhhhhEeccccCCHHHhhhccccchhHHHHHH
Confidence 67889999999999999999999999999999999 678899999999999999999999999999999999999999
Q ss_pred eecCceeeecCCCchHHHHHHHhhhcCCCe
Q 018737 271 SINSDSYMATYFGNMDKMVAAMRAFKGLYK 300 (351)
Q Consensus 271 ~l~SDvFv~t~~gnfa~~v~GhR~y~G~~k 300 (351)
|++||+||+|..++|+.+|+++|.|.|+.+
T Consensus 317 ~~~s~~Figt~~Stfs~~i~~~R~~~g~~~ 346 (351)
T PF10250_consen 317 CSRSDVFIGTCGSTFSSNIARERHYRGKPK 346 (351)
T ss_dssp HHHSSEEEE-TT-HHHHHHHHHHHHSSSS-
T ss_pred HhcCCEEEecCcchhHHHhhcccCcCCCCC
Confidence 999999999998899999999999999663
|
Six highly conserved cysteines are present as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and Caenorhabditis elegans. Both features are characteristic of several glycosyltransferase families. The enzyme is a membrane-bound protein released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese []. ; PDB: 3ZY6_A 3ZY3_A 3ZY5_A 3ZY2_A 3ZY4_A. |
| >KOG3849 consensus GDP-fucose protein O-fucosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF05830 NodZ: Nodulation protein Z (NodZ); InterPro: IPR008716 The nodulation genes of Rhizobia are regulated by the nodD gene product in response to host-produced flavonoids and appear to encode enzymes involved in the production of a lipo-chitose signal molecule required for infection and nodule formation | Back alignment and domain information |
|---|
| >KOG3705 consensus Glycoprotein 6-alpha-L-fucosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 351 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-07 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 58.7 bits (141), Expect = 1e-09
Identities = 68/376 (18%), Positives = 110/376 (29%), Gaps = 121/376 (32%)
Query: 24 FEVAAYWNESSDFADIFEADYFIQHMDGFVKVVKELPPEISSKEPF-HV----------- 71
FE + + D +FE F+ + D K V+++P I SKE H+
Sbjct: 9 FETGEHQYQYKDILSVFEDA-FVDNFD--CKDVQDMPKSILSKEEIDHIIMSKDAVSGTL 65
Query: 72 ---DCSKRKG-----QF-------DY--------VESVLPALLEHKYISLTPAMSQRRDR 108
K +F +Y E P+++ YI +RDR
Sbjct: 66 RLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIE-------QRDR 118
Query: 109 Y----PRFAKAALCQACYSALRLTRSLQKKAAELLEAIPKPFLSLHLRFEPDMVAYSQCE 164
FAK Y+ RL L+ + A LLE P + + ++
Sbjct: 119 LYNDNQVFAK-------YNVSRLQPYLKLRQA-LLELRPAKNVLID-----GVL------ 159
Query: 165 YQGLSPTSMQAIEAARGDRKPWTGEVAHI-WRRRGKCPLTPNETALILQALSIPTNTNIY 223
G T + A++ K I W C +P +LQ L + N +
Sbjct: 160 --GSGKTWV-ALDVCL-SYKVQCKMDFKIFWLNLKNC-NSPETVLEMLQKLLYQIDPN-W 213
Query: 224 LAAGDGLMEIEGLTSVYTNVVTKSALRTGEDF--TRMHGNTKAALDYYVSINSDSYMATY 281
+ D I+ ++ LR ++ + N L +
Sbjct: 214 TSRSDHSSNIK-----LRIHSIQAELR---RLLKSKPYENCLLVLL-------NVQ---- 254
Query: 282 FGNMDKMVAAMRAFKGLYKTLFLSRKA--------------FAEFTYQGLEGKELMQALW 327
+ AF K L +R + L E+ L
Sbjct: 255 ----NAKAW--NAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLL 308
Query: 328 KVHRDDFLMGRGSALP 343
K +L R LP
Sbjct: 309 K-----YLDCRPQDLP 319
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 351 | |||
| 4ap5_A | 408 | GDP-fucose protein O-fucosyltransferase 2; GT-B, G | 99.39 | |
| 3zy2_A | 362 | Putative GDP-fucose protein O-fucosyltransferase; | 98.83 | |
| 2de0_X | 526 | Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran | 96.51 | |
| 2hhc_A | 330 | NODZ, nodulation fucosyltransferase NODZ; glycosyl | 94.59 |
| >4ap5_A GDP-fucose protein O-fucosyltransferase 2; GT-B, GT68; HET: NAG; 3.00A {Homo sapiens} PDB: 4ap6_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=1.2e-12 Score=129.50 Aligned_cols=166 Identities=14% Similarity=0.145 Sum_probs=109.1
Q ss_pred ccccccHHHHHHHHHHHHh-cCCCeeEeeeccchhhhhhcccccCCCChhHHHHHHHHhcCCCCCCchhhhhhhcCCCCC
Q 018737 123 SALRLTRSLQKKAAELLEA-IPKPFLSLHLRFEPDMVAYSQCEYQGLSPTSMQAIEAARGDRKPWTGEVAHIWRRRGKCP 201 (351)
Q Consensus 123 ~ALrF~~~I~~lg~~lv~r-l~~~fiAlHLR~E~Dmla~s~C~~~g~~~~e~~~l~~~R~~~~~w~~~~~~~~R~~G~CP 201 (351)
..|+|.+.|.+.|++.++. |.++|+++|+|...|+... |...+- +. ..-....+|...+-. .-....+|
T Consensus 217 r~l~~s~~l~~~a~~fi~~~L~~~~~~~h~r~~~dw~~~--~~~~~~--~~-----~~~y~~~H~Rr~d~~-~~~~~~~p 286 (408)
T 4ap5_A 217 RSMVFARHLREVGDEFRSRHLNSTDDADRIPFQEDWMKM--KVKLGS--AL-----GGPYLGVHLRRKDFI-WGHRQDVP 286 (408)
T ss_dssp HTCCBCHHHHHHHHHHHHHHHCCCTTTTTCCCCSSGGGC--CCCTTC--BC-----CEEEEEEEECCTTTT-TTTCSSSC
T ss_pred HHhhhhHHHHHHHHHHHHHHhCcccceeecccchhHhhh--hccccc--cc-----CCCccccccccccch-hhhhccCC
Confidence 4799999999999998775 6789999999999888763 331110 00 000001112211100 01122344
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeecCCcchhhhHHHhccccccccCCCChhhhccccCCcccceeeEEeecCceeeecC
Q 018737 202 LTPNETALILQALSIPTNTNIYLAAGDGLMEIEGLTSVYTNVVTKSALRTGEDFTRMHGNTKAALDYYVSINSDSYMATY 281 (351)
Q Consensus 202 LtPeEvgl~L~alGf~~~T~IYlA~g~g~~~l~~L~~~fP~~~tKe~L~~~~el~~~~~~~~aAlDy~V~l~SDvFv~t~ 281 (351)
-.++-+..+.+.+.=.+.+.||||+-+.+..+.-|++.+|.++.-.. ..+++..+...+.|.||-+||.+|++||+|.
T Consensus 287 s~~~~~~~i~~~~~~~~~~~VyiATD~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~d~~~a~idq~Ic~~a~~FiGt~ 364 (408)
T 4ap5_A 287 SLEGAVRKIRSLMKTHRLDKVFVATDAVRKEYEELKKLLPEMVRFEP--TWEELELYKDGGVAIIDQWICAHARFFIGTS 364 (408)
T ss_dssp CHHHHHHHHHHHHHHHTCSCEEEEECCCHHHHHHHHHHCTTEECCCC--CHHHHHHHHHHHHHHHHHHHHHTEEEEEBCT
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHhCCCcEEecC--cchhhhccCcchhhHHHHHHHHhCCeeEeCC
Confidence 44333333433333234567999987655667789999988754322 2345555556678999999999999999999
Q ss_pred CCchHHHHHHHhhhcCCCe
Q 018737 282 FGNMDKMVAAMRAFKGLYK 300 (351)
Q Consensus 282 ~gnfa~~v~GhR~y~G~~k 300 (351)
.++|+..|.-.|.+.|+..
T Consensus 365 ~StfS~~I~~eR~~~G~~~ 383 (408)
T 4ap5_A 365 VSTFSFRIHEEREILGLDP 383 (408)
T ss_dssp TCHHHHHHHHHHHHHTBCG
T ss_pred cCchhHHHHHHHHhcCCCC
Confidence 9999999999999999763
|
| >3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A* | Back alignment and structure |
|---|
| >2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens} | Back alignment and structure |
|---|
| >2hhc_A NODZ, nodulation fucosyltransferase NODZ; glycosyltransferase; 1.54A {Bradyrhizobium SP} PDB: 2hlh_A 2ocx_A* 3siw_A* 3six_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00