Citrus Sinensis ID: 018737


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-
MRRDFCDGVGVAHLLNATLVLPKFEVAAYWNESSDFADIFEADYFIQHMDGFVKVVKELPPEISSKEPFHVDCSKRKGQFDYVESVLPALLEHKYISLTPAMSQRRDRYPRFAKAALCQACYSALRLTRSLQKKAAELLEAIPKPFLSLHLRFEPDMVAYSQCEYQGLSPTSMQAIEAARGDRKPWTGEVAHIWRRRGKCPLTPNETALILQALSIPTNTNIYLAAGDGLMEIEGLTSVYTNVVTKSALRTGEDFTRMHGNTKAALDYYVSINSDSYMATYFGNMDKMVAAMRAFKGLYKTLFLSRKAFAEFTYQGLEGKELMQALWKVHRDDFLMGRGSALPDCFCEFEL
ccccHHHHHHHHHHHccEEEcccccccccccccccccccccHHHHHHHcccccEEEccccccccccccccccccccccHHHHHHHHHHHHHHcccEEEccccccccccccHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccccEEEccccccHHHHHcccccccccHHHHHHHHHHHccccccccccHHHHHHcccccccHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHHHHHHcccccHHHHccccccHHHHHHHHHcccccEEEEcccccHHHHHHHHHHHcccccEEEccHHHHHHHHcccccHHHHHHHHHHHHHcccccccccccccccccccc
cccHHHHHHHHHHHHHHEEEcccccccccccccccHHHHccHHHHHHHHHHHcEEHHcccHHHcccccccccccccccHHHHHHHHHHHHHHccEEEEcccHHHHHHcccHHHHHHEHHHHHHHHcccHHHHHHHHHHHHHHcccEEEEEEEEcccEEEEcccccccccHHHHHHHHHHHHHcccccccccHHHHHcccccccHHHHHHHHHHcccccccEEEEEEcccHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHEccccEEEEcccccHHHHHHHHHHHccccccccccHHHHHHHHHccccHHHHHHHHHHHHHccccccccccccccEEcccc
mrrdfcdgVGVAHLLNATLVLPKFEVAAYwnessdfadifeaDYFIQHMDGFVKVVkelppeisskepfhvdcskrkgqfDYVESVLPALLEhkyisltpamsqrrdrypRFAKAALCQACYSALRLTRSLQKKAAELLEAipkpflslhlrfepdmvaysqceyqglspTSMQAIEAArgdrkpwtgeVAHIWRrrgkcpltpneTALILQAlsiptntniylAAGDGLMEIEGLTSVYTNVVtksalrtgedftrmhgntKAALDYYVSINSDSYMATYFGNMDKMVAAMRAFKGLYKTLFLSRKAFAEFTYQGLEGKELMQALWKVHRddflmgrgsalpdcfcefel
MRRDFCDGVGVAHLLNATLVLPKFEVAAYWNESSDFADIFEADYFIQHMDGFVKVVKELPPEisskepfhvdcsKRKGQFDYVESVLPALLEHKYISLTPAMSQRRDRYPRFAKAALCQACYSALRLTRSLQKKAAELLEAIPKPFLSLHLRFEPDMVAYSQCEYQGLSPTSMQAIEAARGDRKPWTGEVAHIWrrrgkcpltPNETALILQALSIPTNTNIYLAAGDGLMEIEGLTSVYTNVVTKsalrtgedftrmhgNTKAALDYYVSINSDSYMATYFGNMDKMVAAMRAFKGLYKTLFLSRKAFAEFTYQGLEGKELMQALWKVHRDDFLMGRGSALPDCFCEFEL
MRRDFCDGVGVAHLLNATLVLPKFEVAAYWNESSDFADIFEADYFIQHMDGFVKVVKELPPEISSKEPFHVDCSKRKGQFDYVESVLPALLEHKYISLTPAMSQRRDRYPRFAKAALCQACYSALRLTRSLQKKAAELLEAIPKPFLSLHLRFEPDMVAYSQCEYQGLSPTSMQAIEAARGDRKPWTGEVAHIWRRRGKCPLTPNETALILQALSIPTNTNIYLAAGDGLMEIEGLTSVYTNVVTKSALRTGEDFTRMHGNTKAALDYYVSINSDSYMATYFGNMDKMVAAMRAFKGLYKTLFLSRKAFAEFTYQGLEGKELMQALWKVHRDDFLMGRGSALPDCFCEFEL
****FCDGVGVAHLLNATLVLPKFEVAAYWNESSDFADIFEADYFIQHMDGFVKVVKELPPEI****PFHVDCSKRKGQFDYVESVLPALLEHKYISLTPAMSQRRDRYPRFAKAALCQACYSALRLTRSLQKKAAELLEAIPKPFLSLHLRFEPDMVAYSQCEYQGLSPT*MQAIEAARGDRKPWTGEVAHIWRRRGKCPLTPNETALILQALSIPTNTNIYLAAGDGLMEIEGLTSVYTNVVTKSALRTGEDFTRMHGNTKAALDYYVSINSDSYMATYFGNMDKMVAAMRAFKGLYKTLFLSRKAFAEFTYQGLEGKELMQALWKVH*********************
*RRDFCDGVGVAHLLNATLVLPKFEVAAYWNESSDFADIFEADYFIQHMDGFVKVVKELPPEISSKEPFHVDCSKRKGQFDYVESVLPALLEHKYISLTPAMSQRRDRYPRFAKAALCQACYSALRLTRSLQKKAAELLEAIPKPFLSLHLRFEPDMVAYSQCEYQGLSPTSMQAIEAARGDRKPWTGEVA**WR***KCPLTPNETALILQALSIPTNTNIYLAAGDGLMEIEGLTSVYTNVVTKSALRTGEDFTRMHGNTKAALDYYVSINSDSYMATYFGNMDKMVAAMRAFKGLYKTLFLSRKAFAEFTYQGLEGKEL*********************DCFCEFE*
MRRDFCDGVGVAHLLNATLVLPKFEVAAYWNESSDFADIFEADYFIQHMDGFVKVVKELPPEISSKEPFHVDCSKRKGQFDYVESVLPALLEHKYISLTPAMSQRRDRYPRFAKAALCQACYSALRLTRSLQKKAAELLEAIPKPFLSLHLRFEPDMVAYSQCEYQGLSPTSMQAI*********WTGEVAHIWRRRGKCPLTPNETALILQALSIPTNTNIYLAAGDGLMEIEGLTSVYTNVVTKSALRTGEDFTRMHGNTKAALDYYVSINSDSYMATYFGNMDKMVAAMRAFKGLYKTLFLSRKAFAEFTYQGLEGKELMQALWKVHRDDFLMGRGSALPDCFCEFEL
*RRDFCDGVGVAHLLNATLVLPKFEVAAYWNESSDFADIFEADYFIQHMDGFVKVVKELPPEISSKEPFHVDCSKRKGQFDYVESVLPALLEHKYISLTPAMSQRRDRYPRFAKAALCQACYSALRLTRSLQKKAAELLEAIPKPFLSLHLRFEPDMVAYSQCEYQGLSPTSMQAIEAARGDRKPWTGEVAHIWRRRGKCPLTPNETALILQALSIPTNTNIYLAAGDGLMEIEGLTSVYTNVVTKSALRTGEDFTRMHGNTKAALDYYVSINSDSYMATYFGNMDKMVAAMRAFKGLYKTLFLSRKAFAEFTYQGLEGKELMQALWKVHRDDFLMGRGSALPDCFCEF**
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MRRDFCDGVGVAHLLNATLVLPKFEVAAYWNESSDFADIFEADYFIQHMDGFVKVVKELPPEISSKEPFHVDCSKRKGQFDYVESVLPALLEHKYISLTPAMSQRRDRYPRFAKAALCQACYSALRLTRSLQKKAAELLEAIPKPFLSLHLRFEPDMVAYSQCEYQGLSPTSMQAIEAARGDRKPWTGEVAHIWRRRGKCPLTPNETALILQALSIPTNTNIYLAAGDGLMEIEGLTSVYTNVVTKSALRTGEDFTRMHGNTKAALDYYVSINSDSYMATYFGNMDKMVAAMRAFKGLYKTLFLSRKAFAEFTYQGLEGKELMQALWKVHRDDFLMGRGSALPDCFCEFEL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query351 2.2.26 [Sep-21-2011]
Q8W486519 Uncharacterized protein A no no 0.985 0.666 0.273 1e-30
>sp|Q8W486|Y1491_ARATH Uncharacterized protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=1 SV=1 Back     alignment and function desciption
 Score =  134 bits (337), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 182/377 (48%), Gaps = 31/377 (8%)

Query: 2   RRDFCDGVGVAHLLNATLVLPKFEVAAYWNESSDFADIFEADYFIQHMDGFVKVVKELPP 61
           R   C+ V  A ++NATLVLP+ +  ++W++ S F  I++ ++FI+ +   VK+V ++P 
Sbjct: 104 RSAICNAVLAARIMNATLVLPELDANSFWHDDSGFQGIYDVEHFIETLKYDVKIVGKIPD 163

Query: 62  EISSKEPFHVDCSKRKGQFD-----YVESVLPALLEHKYISLTP---AMSQRRDRYPRFA 113
              + +   +   + +   D     Y+ + L A+ EH  I LTP    +++  D  P + 
Sbjct: 164 VHKNGKTKKIKAFQIRPPRDAPIEWYLTTALKAMREHSAIYLTPFSHRLAEEIDN-PEYQ 222

Query: 114 KAALCQACYSALRLTRSLQKKAAELLEAIPKP--FLSLHLRFEPDMVAYSQCEYQGLSPT 171
           +   C+  Y ALR    + K +  +++ +     F+S+HLRFE DM+A++ C +   +P 
Sbjct: 223 RLR-CRVNYHALRFKPHIMKLSESIVDKLRSQGHFMSIHLRFEMDMLAFAGC-FDIFNPE 280

Query: 172 SMQAIEAARGDRKPWTGEVAHIWRRRGKCPLTPNETALILQALSIPTNTNIYLAAGD--- 228
             + +   R +       + +  R  GKCPLTP E  LIL+A+    +T IYLAAG+   
Sbjct: 281 EQKILRKYRKENFADKRLIYNERRAIGKCPLTPEEVGLILRAMRFDNSTRIYLAAGELFG 340

Query: 229 GLMEIEGLTSVYTNVVTKSALRTGEDFTRM-HGNTKAALDYYVSINSDSYMATYFG--NM 285
           G   ++   +++  +   S++   E+ +    G   +A+DY V + SD +M TY G  N 
Sbjct: 341 GEQFMKPFRTLFPRLDNHSSVDPSEELSATSQGLIGSAVDYMVCLLSDIFMPTYDGPSNF 400

Query: 286 DKMVAAMRAFKGLYKTLFLSRKAFAEFTYQGLEGKE--LMQALWKVHRDDFLMGR----- 338
              +   R + G   T+   RKA A       +GK     +A+ +V       G      
Sbjct: 401 ANNLLGHRLYYGFRTTIRPDRKALAPIFIAREKGKRAGFEEAVRRVMLKTNFGGPHKRVS 460

Query: 339 -----GSALPDCFCEFE 350
                 ++ P+CFC+  
Sbjct: 461 PESFYTNSWPECFCQMN 477





Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query351
317106736444 JHL06P13.13 [Jatropha curcas] 0.988 0.781 0.864 0.0
224073734437 predicted protein [Populus trichocarpa] 0.997 0.800 0.82 1e-176
356519361386 PREDICTED: DUF246 domain-containing prot 1.0 0.909 0.826 1e-176
449436132441 PREDICTED: DUF246 domain-containing prot 1.0 0.795 0.817 1e-175
255553137441 conserved hypothetical protein [Ricinus 0.965 0.768 0.846 1e-174
297743429443 unnamed protein product [Vitis vinifera] 1.0 0.792 0.810 1e-174
225443013 476 PREDICTED: DUF246 domain-containing prot 1.0 0.737 0.810 1e-174
356528958440 PREDICTED: DUF246 domain-containing prot 1.0 0.797 0.803 1e-172
5903043399 Similar to gb|X80301 auxin-independent g 1.0 0.879 0.789 1e-169
42571835351 O-fucosyltransferase family protein [Ara 1.0 1.0 0.789 1e-169
>gi|317106736|dbj|BAJ53232.1| JHL06P13.13 [Jatropha curcas] Back     alignment and taxonomy information
 Score =  643 bits (1659), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 300/347 (86%), Positives = 324/347 (93%)

Query: 5   FCDGVGVAHLLNATLVLPKFEVAAYWNESSDFADIFEADYFIQHMDGFVKVVKELPPEIS 64
           FCDGVG+A LLNATLVLPKFE AAYWNESS FAD+F+ DYFIQ + GFVKVVK+LPPEI+
Sbjct: 98  FCDGVGIARLLNATLVLPKFEAAAYWNESSGFADVFDVDYFIQQVKGFVKVVKDLPPEIA 157

Query: 65  SKEPFHVDCSKRKGQFDYVESVLPALLEHKYISLTPAMSQRRDRYPRFAKAALCQACYSA 124
           SKEPFHVDCSKRKGQFDY+ESVLP+LLEH YIS+TPAMSQRRDRYP +AKAALCQACYSA
Sbjct: 158 SKEPFHVDCSKRKGQFDYIESVLPSLLEHHYISITPAMSQRRDRYPSYAKAALCQACYSA 217

Query: 125 LRLTRSLQKKAAELLEAIPKPFLSLHLRFEPDMVAYSQCEYQGLSPTSMQAIEAARGDRK 184
           LRLTRSL+KKA+ELLEAIPKPFLSLHLRFEPDMVAYSQCEY GLSP SM+AIEAAR  RK
Sbjct: 218 LRLTRSLEKKASELLEAIPKPFLSLHLRFEPDMVAYSQCEYLGLSPASMEAIEAARDYRK 277

Query: 185 PWTGEVAHIWRRRGKCPLTPNETALILQALSIPTNTNIYLAAGDGLMEIEGLTSVYTNVV 244
           PWTGE A IWR+RGKCPLTPNETALILQALSIPTNTNIYLAAGDGLMEIEGLTS+YTNV 
Sbjct: 278 PWTGESARIWRKRGKCPLTPNETALILQALSIPTNTNIYLAAGDGLMEIEGLTSIYTNVF 337

Query: 245 TKSALRTGEDFTRMHGNTKAALDYYVSINSDSYMATYFGNMDKMVAAMRAFKGLYKTLFL 304
            K+ L + EDFT MHGNTKAALDYYVSINSDSYMATYFGNMDKMVAAMRA+KGLYKTLFL
Sbjct: 338 NKATLLSSEDFTSMHGNTKAALDYYVSINSDSYMATYFGNMDKMVAAMRAYKGLYKTLFL 397

Query: 305 SRKAFAEFTYQGLEGKELMQALWKVHRDDFLMGRGSALPDCFCEFEL 351
           SR+AFAEFT+Q L+GKELMQALWK H +DF+MGRGSALPDCFCEF+L
Sbjct: 398 SRRAFAEFTFQSLKGKELMQALWKTHEEDFVMGRGSALPDCFCEFKL 444




Source: Jatropha curcas

Species: Jatropha curcas

Genus: Jatropha

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224073734|ref|XP_002304147.1| predicted protein [Populus trichocarpa] gi|222841579|gb|EEE79126.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356519361|ref|XP_003528341.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine max] Back     alignment and taxonomy information
>gi|449436132|ref|XP_004135848.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis sativus] gi|449530766|ref|XP_004172363.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|255553137|ref|XP_002517611.1| conserved hypothetical protein [Ricinus communis] gi|223543243|gb|EEF44775.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|297743429|emb|CBI36296.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225443013|ref|XP_002267150.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356528958|ref|XP_003533064.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine max] Back     alignment and taxonomy information
>gi|5903043|gb|AAD55602.1|AC008016_12 Similar to gb|X80301 auxin-independent growth promoter (axi 1) from Nicotiana tabacum. EST gb|AA605466 comes from this gene [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|42571835|ref|NP_974008.1| O-fucosyltransferase family protein [Arabidopsis thaliana] gi|332194711|gb|AEE32832.1| O-fucosyltransferase family protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query351
TAIR|locus:2035084439 AT1G52630 [Arabidopsis thalian 1.0 0.799 0.789 8.2e-154
TAIR|locus:2076552512 AT3G02250 [Arabidopsis thalian 0.931 0.638 0.336 1.6e-47
TAIR|locus:2143181508 AT5G15740 [Arabidopsis thalian 0.905 0.625 0.333 3.4e-45
TAIR|locus:2009467565 AT1G22460 [Arabidopsis thalian 0.871 0.541 0.329 2.5e-43
TAIR|locus:2157096652 AT5G35570 [Arabidopsis thalian 0.940 0.506 0.325 1.3e-41
TAIR|locus:2080285638 AT3G54100 [Arabidopsis thalian 0.971 0.534 0.318 1.9e-40
TAIR|locus:2014869499 AT1G14020 [Arabidopsis thalian 0.880 0.619 0.326 2.6e-40
TAIR|locus:2150129631 FRB1 "FRIABLE 1" [Arabidopsis 0.874 0.486 0.343 2.9e-40
TAIR|locus:2065563638 AT2G37980 [Arabidopsis thalian 0.874 0.481 0.331 4.3e-40
TAIR|locus:2130938549 AT4G16650 [Arabidopsis thalian 0.851 0.544 0.333 5.3e-40
TAIR|locus:2035084 AT1G52630 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1500 (533.1 bits), Expect = 8.2e-154, P = 8.2e-154
 Identities = 277/351 (78%), Positives = 311/351 (88%)

Query:     1 MRRDFCDGVGVAHLLNATLVLPKFEVAAYWNESSDFADIFEADYFIQHMDGFVKVVKELP 60
             MRRD CDGVG+A LLNATLVLPKFEVAAYWNESS FAD+F+ DYFIQ M G+++VVKELP
Sbjct:    89 MRRDLCDGVGIARLLNATLVLPKFEVAAYWNESSGFADVFDVDYFIQKMSGYIEVVKELP 148

Query:    61 PEISSKEPFHVDCSKRKGQFDYVESVLPALLEHKYISLTPAMSQRRDRYPRFAKAALCQA 120
              +I+SKEPF VDCSKRKGQFDY+ESVLP LLEH YIS TPAMSQRRDRYP +A+A LCQA
Sbjct:   149 KDIASKEPFKVDCSKRKGQFDYIESVLPLLLEHHYISFTPAMSQRRDRYPEYARATLCQA 208

Query:   121 CYSALRLTRSLQKKAAELLEAIPKPFLSLHLRFEPDMVAYSQCEYQGLSPTSMQAIEAAR 180
             CYSA+ LT SL+KKA EL +AIPKPFLSLHLRFEPDMVAYSQCEY  LSP+S+ AIEAAR
Sbjct:   209 CYSAIHLTSSLEKKAVELFDAIPKPFLSLHLRFEPDMVAYSQCEYPNLSPSSIAAIEAAR 268

Query:   181 GDRKPWTGEVAHIWRRRGKCPLTPNETALILQALSIPTNTNIYLAAGDGLMEIEGLTSVY 240
              DRKPWTGE+A  WR+RGKCPLTPNET L+LQ+L+IPT+TNIYLAAGDGLME+EG TSVY
Sbjct:   269 ADRKPWTGELAQTWRKRGKCPLTPNETVLMLQSLNIPTSTNIYLAAGDGLMEMEGFTSVY 328

Query:   241 TNVVTKSALRTGEDFTRMHGNTKAALDYYVSINSDSYMATYFGNMDKMVAAMRAFKGLYK 300
             TNV TKS L   EDFTRMHGNTKAALDY+VSINSD+Y+ATYFGNMDK+VAAMR +K ++ 
Sbjct:   329 TNVFTKSVLLNQEDFTRMHGNTKAALDYHVSINSDAYVATYFGNMDKIVAAMRTYKQMHN 388

Query:   301 TLFLSRKAFAEFTYQGLEGKELMQALWKVHRDDFLMGRGSALPDCFCEFEL 351
             TLFLSRKAFAE T QGLEG EL +ALW+VH+ DF +GRG ALPDCFCEFEL
Sbjct:   389 TLFLSRKAFAELTSQGLEGAELKKALWEVHKSDFAIGRGFALPDCFCEFEL 439




GO:0005794 "Golgi apparatus" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM
TAIR|locus:2076552 AT3G02250 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2143181 AT5G15740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2009467 AT1G22460 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2157096 AT5G35570 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080285 AT3G54100 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2014869 AT1G14020 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2150129 FRB1 "FRIABLE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2065563 AT2G37980 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2130938 AT4G16650 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query351
cd11299290 cd11299, O-FucT_plant, GDP-fucose protein O-fucosy 1e-105
pfam10250315 pfam10250, O-FucT, GDP-fucose protein O-fucosyltra 1e-79
cd11296206 cd11296, O-FucT_like, GDP-fucose protein O-fucosyl 1e-05
>gnl|CDD|211385 cd11299, O-FucT_plant, GDP-fucose protein O-fucosyltransferase, plant specific subfamily Back     alignment and domain information
 Score =  310 bits (796), Expect = e-105
 Identities = 115/312 (36%), Positives = 162/312 (51%), Gaps = 45/312 (14%)

Query: 1   MRRDFCDGVGVAHLLNATLVLPKFEVAAYWNESSDFADIFEADYFIQHMDGFVKVVKELP 60
            R   CD V VA LLNATLVLP+ +  + W +SS F DI++ D+FI+ +   V+VVK+LP
Sbjct: 13  QRSQICDAVAVARLLNATLVLPELDKNSVWGDSSKFGDIYDVDHFIKSLKDDVRVVKKLP 72

Query: 61  PEISSKEP--FHVDCSKRKGQFDYVESVLPALLEHKYISLTPAMSQRRDRY-PRFAKAAL 117
            E++SK+P         R     Y+E VLP L +H  I L P  S+  +   P   +   
Sbjct: 73  EELASKKPEITVKRVPSRSSPSYYLEEVLPLLKKHGVIRLAPFDSRLANDLLPPEIQRLR 132

Query: 118 CQACYSALRLTRSLQKKAAELLEAIPK---PFLSLHLRFEPDMVAYSQCEYQGLSPTSMQ 174
           C+  + ALR    +++   +L++ + +   PFL+LHLRFE DM+A+S C           
Sbjct: 133 CRVNFHALRFVPEIEELGDKLVDRLREAGGPFLALHLRFEKDMLAFSGC----------- 181

Query: 175 AIEAARGDRKPWTGEVAHIWRRRGKCPLTPNETALILQALSIPTNTNIYLAAGD---GLM 231
                                  GKCPLTP E  L+L+AL  P +T IYLAAG+   G  
Sbjct: 182 -----------------------GKCPLTPEEVGLLLRALGFPRSTRIYLAAGEIYGGER 218

Query: 232 EIEGLTSVYTNVVTKSALRTGED--FTRMHGNTKAALDYYVSINSDSYMATYFGNMDKMV 289
            ++ L S++ N+ TK  L T E+      H +  AALDY V + SD ++ TY GN  K V
Sbjct: 219 RLDPLRSIFPNLYTKETLATAEELAPFSGHSSRLAALDYIVCLESDVFVPTYGGNFAKAV 278

Query: 290 AAMRAFKGLYKT 301
           A  R + G  KT
Sbjct: 279 AGHRRYLGHRKT 290


Some members of this plant-specific family of O-fucosyltransferases have been annotated as auxin-independent growth promotors. The function of the protein seems unclear. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. Length = 290

>gnl|CDD|220652 pfam10250, O-FucT, GDP-fucose protein O-fucosyltransferase Back     alignment and domain information
>gnl|CDD|211383 cd11296, O-FucT_like, GDP-fucose protein O-fucosyltransferase and related proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 351
PF10250351 O-FucT: GDP-fucose protein O-fucosyltransferase; I 100.0
KOG3849386 consensus GDP-fucose protein O-fucosyltransferase 95.11
PF05830321 NodZ: Nodulation protein Z (NodZ); InterPro: IPR00 95.05
KOG3705580 consensus Glycoprotein 6-alpha-L-fucosyltransferas 82.63
>PF10250 O-FucT: GDP-fucose protein O-fucosyltransferase; InterPro: IPR019378 This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats Back     alignment and domain information
Probab=100.00  E-value=1.8e-50  Score=391.06  Aligned_cols=284  Identities=27%  Similarity=0.405  Sum_probs=194.0

Q ss_pred             CchhhhHHHHHHHHhcceEEecccccccccCCCCC-----CCCcCcHHHHHHhccCceEEeecCCccccCCCc-------
Q 018737            1 MRRDFCDGVGVAHLLNATLVLPKFEVAAYWNESSD-----FADIFEADYFIQHMDGFVKVVKELPPEISSKEP-------   68 (351)
Q Consensus         1 ~R~~IcdaV~vArlLnATLVlP~l~~~~~w~d~s~-----F~dIfD~dhFI~sL~~dVrIvk~LP~~~~~~~~-------   68 (351)
                      ||+++++||++|++||+|||||.+...+.|++.++     |+++||++||+++++++|.+.+.+|..+.....       
T Consensus        13 Qr~~~~~a~~~A~~LnRTLVLPp~~~~~~~~~~~~~~~ipf~~~fD~~~l~~~~~~vi~~~ef~~~~~~~~~~~~~~~~~   92 (351)
T PF10250_consen   13 QRMGFENAVVFAKALNRTLVLPPFIKHYHWKDQSKQRHIPFSDFFDVEHLRKFLRPVITMEEFLPKHWDEVFRLQYCWSP   92 (351)
T ss_dssp             HHHHHHHHHHHHHHHT-EEE--EEEEESSSS----EEEEEHHHHB-HHHHTTTS--EE-HHHHHHHHS-GGG-EEEESS-
T ss_pred             HHHHHHHHHHHHHHhCCEEEcCCccccccccccccccccChhhhccHHHHHHHhhCceehheeccchhccccchhhcccc
Confidence            68999999999999999999999999999999887     999999999999999999999999865543211       


Q ss_pred             ------------------------ceecccC-CCCccchHHhhhHhhhhc------ceEEEccccccccc-CChhhhhhh
Q 018737           69 ------------------------FHVDCSK-RKGQFDYVESVLPALLEH------KYISLTPAMSQRRD-RYPRFAKAA  116 (351)
Q Consensus        69 ------------------------~~i~~~~-~~s~~~Y~~~vlp~l~k~------~vi~~~~~~~~l~~-~~P~~~q~l  116 (351)
                                              ....... +.++.+|+++++|.+.++      +++.|.++...+.+ ..+.++|+ 
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~r-  171 (351)
T PF10250_consen   93 WESGSWDDNMKDGNPFGPFWDKFPIKFDPCEFWSSPSLYLEDVLPELREWNENSEHPVIAFTGFESRLPDNYLDRDLQR-  171 (351)
T ss_dssp             B--------TTSSTTHHHHHHHTT---SEEE-E-TTSTTTT-STTHHHHHHHHTT-SEEEESS-SS-SS--GGGGGGGG-
T ss_pred             cccccchhhccccccccccccccceeeccccccCCchhhHHHhhhHHhhhccccccccceeccccccchhcccCccceE-
Confidence                                    0011111 234557788899999886      99999999888764 47777776 


Q ss_pred             hHHhhcccccccHHHHHHHHHHHHhcC---CCeeEeeeccchhhhhhcccccCCCChhHHHHHHHHhcCCCCCCchhhhh
Q 018737          117 LCQACYSALRLTRSLQKKAAELLEAIP---KPFLSLHLRFEPDMVAYSQCEYQGLSPTSMQAIEAARGDRKPWTGEVAHI  193 (351)
Q Consensus       117 RCrvnf~ALrF~~~I~~lg~~lv~rl~---~~fiAlHLR~E~Dmla~s~C~~~g~~~~e~~~l~~~R~~~~~w~~~~~~~  193 (351)
                             +|+|+++|+++|+++++++.   ++|||+|||+|+||  +++|.+ ++   +...|+.+|..  ..+......
T Consensus       172 -------~l~~~~~i~~~a~~~i~~~~~~~~~yiavHlR~~~D~--~~~C~~-~~---~~~~~~~~~~~--~~~~~~~~~  236 (351)
T PF10250_consen  172 -------YLRFSPEIRELADKFIKRLLAGGGPYIAVHLRRGKDW--FSACEF-KG---ERHLLASPRCW--GKKSINPEK  236 (351)
T ss_dssp             -------G--B-HHHHHHHHHHHHHH----SSEEEEEE--SHHH--HHHHCT--T-------TTTHHHH---GGGTT---
T ss_pred             -------EEecCHHHHHHHHHHHHHhhcccCceEEEeecccCch--Hhhccc-CC---chHHHHHhHhh--ccccccchh
Confidence                   99999999999999999987   89999999999999  899997 44   55666666642  001112346


Q ss_pred             hhcCCCCCCCHHHHHHHHHHcCCCCCcEEEEeecC---CcchhhhHHHhccccccccCCCChhhhccccCCcccceeeEE
Q 018737          194 WRRRGKCPLTPNETALILQALSIPTNTNIYLAAGD---GLMEIEGLTSVYTNVVTKSALRTGEDFTRMHGNTKAALDYYV  270 (351)
Q Consensus       194 ~R~~G~CPLtPeEvgl~L~alGf~~~T~IYlA~g~---g~~~l~~L~~~fP~~~tKe~L~~~~el~~~~~~~~aAlDy~V  270 (351)
                      .+..+.||++|++++.+++++|+.+.|.||||+++   |...|++|++.||++++|+++.+.+|++++.++++|+||++|
T Consensus       237 ~~~~~~~p~~~~~~~~i~~~~~~~~~~~vYiAtd~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~vD~~i  316 (351)
T PF10250_consen  237 KRRNGCCPSTPQEAKQILRALGKNNTTVVYIATDEIYGGERRLDPLKNMFPNVVTKDDLLSHEELEPLNDDQLAMVDQEI  316 (351)
T ss_dssp             --HHHHS--HHHHHHHHHHHHHHHT-SEEEEEESS-----------HHHHHHHHGGGT--EE--S-----S--HHHHHHH
T ss_pred             hhhcCCCCChHHHHHHHHHHhccCCCCEEEEecCcccccchhHHHHHHHhhhhEeccccCCHHHhhhccccchhHHHHHH
Confidence            67889999999999999999999999999999999   678899999999999999999999999999999999999999


Q ss_pred             eecCceeeecCCCchHHHHHHHhhhcCCCe
Q 018737          271 SINSDSYMATYFGNMDKMVAAMRAFKGLYK  300 (351)
Q Consensus       271 ~l~SDvFv~t~~gnfa~~v~GhR~y~G~~k  300 (351)
                      |++||+||+|..++|+.+|+++|.|.|+.+
T Consensus       317 ~~~s~~Figt~~Stfs~~i~~~R~~~g~~~  346 (351)
T PF10250_consen  317 CSRSDVFIGTCGSTFSSNIARERHYRGKPK  346 (351)
T ss_dssp             HHHSSEEEE-TT-HHHHHHHHHHHHSSSS-
T ss_pred             HhcCCEEEecCcchhHHHhhcccCcCCCCC
Confidence            999999999998899999999999999663



Six highly conserved cysteines are present as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and Caenorhabditis elegans. Both features are characteristic of several glycosyltransferase families. The enzyme is a membrane-bound protein released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese []. ; PDB: 3ZY6_A 3ZY3_A 3ZY5_A 3ZY2_A 3ZY4_A.

>KOG3849 consensus GDP-fucose protein O-fucosyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF05830 NodZ: Nodulation protein Z (NodZ); InterPro: IPR008716 The nodulation genes of Rhizobia are regulated by the nodD gene product in response to host-produced flavonoids and appear to encode enzymes involved in the production of a lipo-chitose signal molecule required for infection and nodule formation Back     alignment and domain information
>KOG3705 consensus Glycoprotein 6-alpha-L-fucosyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query351
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-07
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 58.7 bits (141), Expect = 1e-09
 Identities = 68/376 (18%), Positives = 110/376 (29%), Gaps = 121/376 (32%)

Query: 24  FEVAAYWNESSDFADIFEADYFIQHMDGFVKVVKELPPEISSKEPF-HV----------- 71
           FE   +  +  D   +FE   F+ + D   K V+++P  I SKE   H+           
Sbjct: 9   FETGEHQYQYKDILSVFEDA-FVDNFD--CKDVQDMPKSILSKEEIDHIIMSKDAVSGTL 65

Query: 72  ---DCSKRKG-----QF-------DY--------VESVLPALLEHKYISLTPAMSQRRDR 108
                   K      +F       +Y         E   P+++   YI        +RDR
Sbjct: 66  RLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIE-------QRDR 118

Query: 109 Y----PRFAKAALCQACYSALRLTRSLQKKAAELLEAIPKPFLSLHLRFEPDMVAYSQCE 164
                  FAK       Y+  RL   L+ + A LLE  P   + +       ++      
Sbjct: 119 LYNDNQVFAK-------YNVSRLQPYLKLRQA-LLELRPAKNVLID-----GVL------ 159

Query: 165 YQGLSPTSMQAIEAARGDRKPWTGEVAHI-WRRRGKCPLTPNETALILQALSIPTNTNIY 223
             G   T + A++      K        I W     C  +P     +LQ L    + N +
Sbjct: 160 --GSGKTWV-ALDVCL-SYKVQCKMDFKIFWLNLKNC-NSPETVLEMLQKLLYQIDPN-W 213

Query: 224 LAAGDGLMEIEGLTSVYTNVVTKSALRTGEDF--TRMHGNTKAALDYYVSINSDSYMATY 281
            +  D    I+           ++ LR       ++ + N    L        +      
Sbjct: 214 TSRSDHSSNIK-----LRIHSIQAELR---RLLKSKPYENCLLVLL-------NVQ---- 254

Query: 282 FGNMDKMVAAMRAFKGLYKTLFLSRKA--------------FAEFTYQGLEGKELMQALW 327
               +       AF    K L  +R                  +     L   E+   L 
Sbjct: 255 ----NAKAW--NAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLL 308

Query: 328 KVHRDDFLMGRGSALP 343
           K     +L  R   LP
Sbjct: 309 K-----YLDCRPQDLP 319


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query351
4ap5_A408 GDP-fucose protein O-fucosyltransferase 2; GT-B, G 99.39
3zy2_A362 Putative GDP-fucose protein O-fucosyltransferase; 98.83
2de0_X526 Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran 96.51
2hhc_A330 NODZ, nodulation fucosyltransferase NODZ; glycosyl 94.59
>4ap5_A GDP-fucose protein O-fucosyltransferase 2; GT-B, GT68; HET: NAG; 3.00A {Homo sapiens} PDB: 4ap6_A* Back     alignment and structure
Probab=99.39  E-value=1.2e-12  Score=129.50  Aligned_cols=166  Identities=14%  Similarity=0.145  Sum_probs=109.1

Q ss_pred             ccccccHHHHHHHHHHHHh-cCCCeeEeeeccchhhhhhcccccCCCChhHHHHHHHHhcCCCCCCchhhhhhhcCCCCC
Q 018737          123 SALRLTRSLQKKAAELLEA-IPKPFLSLHLRFEPDMVAYSQCEYQGLSPTSMQAIEAARGDRKPWTGEVAHIWRRRGKCP  201 (351)
Q Consensus       123 ~ALrF~~~I~~lg~~lv~r-l~~~fiAlHLR~E~Dmla~s~C~~~g~~~~e~~~l~~~R~~~~~w~~~~~~~~R~~G~CP  201 (351)
                      ..|+|.+.|.+.|++.++. |.++|+++|+|...|+...  |...+-  +.     ..-....+|...+-. .-....+|
T Consensus       217 r~l~~s~~l~~~a~~fi~~~L~~~~~~~h~r~~~dw~~~--~~~~~~--~~-----~~~y~~~H~Rr~d~~-~~~~~~~p  286 (408)
T 4ap5_A          217 RSMVFARHLREVGDEFRSRHLNSTDDADRIPFQEDWMKM--KVKLGS--AL-----GGPYLGVHLRRKDFI-WGHRQDVP  286 (408)
T ss_dssp             HTCCBCHHHHHHHHHHHHHHHCCCTTTTTCCCCSSGGGC--CCCTTC--BC-----CEEEEEEEECCTTTT-TTTCSSSC
T ss_pred             HHhhhhHHHHHHHHHHHHHHhCcccceeecccchhHhhh--hccccc--cc-----CCCccccccccccch-hhhhccCC
Confidence            4799999999999998775 6789999999999888763  331110  00     000001112211100 01122344


Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEeecCCcchhhhHHHhccccccccCCCChhhhccccCCcccceeeEEeecCceeeecC
Q 018737          202 LTPNETALILQALSIPTNTNIYLAAGDGLMEIEGLTSVYTNVVTKSALRTGEDFTRMHGNTKAALDYYVSINSDSYMATY  281 (351)
Q Consensus       202 LtPeEvgl~L~alGf~~~T~IYlA~g~g~~~l~~L~~~fP~~~tKe~L~~~~el~~~~~~~~aAlDy~V~l~SDvFv~t~  281 (351)
                      -.++-+..+.+.+.=.+.+.||||+-+.+..+.-|++.+|.++.-..  ..+++..+...+.|.||-+||.+|++||+|.
T Consensus       287 s~~~~~~~i~~~~~~~~~~~VyiATD~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~d~~~a~idq~Ic~~a~~FiGt~  364 (408)
T 4ap5_A          287 SLEGAVRKIRSLMKTHRLDKVFVATDAVRKEYEELKKLLPEMVRFEP--TWEELELYKDGGVAIIDQWICAHARFFIGTS  364 (408)
T ss_dssp             CHHHHHHHHHHHHHHHTCSCEEEEECCCHHHHHHHHHHCTTEECCCC--CHHHHHHHHHHHHHHHHHHHHHTEEEEEBCT
T ss_pred             CHHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHhCCCcEEecC--cchhhhccCcchhhHHHHHHHHhCCeeEeCC
Confidence            44333333433333234567999987655667789999988754322  2345555556678999999999999999999


Q ss_pred             CCchHHHHHHHhhhcCCCe
Q 018737          282 FGNMDKMVAAMRAFKGLYK  300 (351)
Q Consensus       282 ~gnfa~~v~GhR~y~G~~k  300 (351)
                      .++|+..|.-.|.+.|+..
T Consensus       365 ~StfS~~I~~eR~~~G~~~  383 (408)
T 4ap5_A          365 VSTFSFRIHEEREILGLDP  383 (408)
T ss_dssp             TCHHHHHHHHHHHHHTBCG
T ss_pred             cCchhHHHHHHHHhcCCCC
Confidence            9999999999999999763



>3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A* Back     alignment and structure
>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens} Back     alignment and structure
>2hhc_A NODZ, nodulation fucosyltransferase NODZ; glycosyltransferase; 1.54A {Bradyrhizobium SP} PDB: 2hlh_A 2ocx_A* 3siw_A* 3six_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00