Citrus Sinensis ID: 018749

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-
MGKGGSLSDGVIKKILLSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYGEAKFDSWGVVLQLGAVAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVELPILRETSSFHFDFVIFGTNSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHSKLQALKAKEAQKKAQQADEESGKLLEERDGEGGGSTKRNESQD
cccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHEEEccccEEHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccc
cccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHEHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHcHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHEEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHccccccccccccccccccccccc
mgkggslsdgVIKKILLSYTYVAIWIFLSFTVIVYNKYILdkkmynwpfpisLTMIHMSFCATLAFLLIKVFkfvepvtmsrdlyfssvVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTfkkesfksdtmcnMVSISVGVAIAAYGEAKFDSWGVVLQLGAVAFEATRLVMIQILLTskgitlnpitslyyvaPCCLVFLLVPwifvelpilretssfhfdFVIFGTNSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIkdtvtpinlfGYGLAFLGVAYYNHSKLQALKAKEAQKKAQQADEESGKLleerdgegggstkrnesqd
mgkggslsdgVIKKILLSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYGEAKFDSWGVVLQLGAVAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVELPILRETSSFHFDFVIFGTNSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHSKLQALKAKEAQKKAQQAdeesgklleerdgegggstkrnesqd
MGKGGSLSDGVIKKILLSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYGEAKFDSWGVVLQLGAVAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVELPILRETSSFHFDFVIFGTNSlcafalnlavfllvGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHSklqalkakeaqkkaqqaDEESGKLLEERDGEGGGSTKRNESQD
*********GVIKKILLSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYGEAKFDSWGVVLQLGAVAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVELPILRETSSFHFDFVIFGTNSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHSKL*****************************************
***************LLSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYGEAKFDSWGVVLQLGAVAFEATRLVMIQILLTS**ITLNPITSLYYVAPCCLVFLLVPWIFVELPILRETSSFHFDFVIFGTNSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYN*********************************************
********DGVIKKILLSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYGEAKFDSWGVVLQLGAVAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVELPILRETSSFHFDFVIFGTNSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHSKLQA***************************************
********DGVIKKILLSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYGEAKFDSWGVVLQLGAVAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVELPILRETSSFHFDFVIFGTNSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHSKLQALKAK***********************************
ooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MGKGGSLSDGVIKKILLSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYGEAKFDSWGVVLQLGAVAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVELPILRETSSFHFDFVIFGTNSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHSKLQALKxxxxxxxxxxxxxxxxxxxxxRDGEGGGSTKRNESQD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query351 2.2.26 [Sep-21-2011]
Q3E6T0349 Probable sugar phosphate/ yes no 0.994 1.0 0.877 0.0
Q9SUV2350 Probable sugar phosphate/ no no 0.994 0.997 0.883 0.0
Q9SKJ7347 Probable sugar phosphate/ no no 0.988 1.0 0.866 1e-177
Q9LFN3351 Probable sugar phosphate/ no no 0.991 0.991 0.840 1e-168
Q9LRP2375 Probable sugar phosphate/ no no 0.894 0.837 0.473 2e-80
Q9LNH5367 Probable sugar phosphate/ no no 0.903 0.863 0.470 6e-77
Q94EI9340 Probable sugar phosphate/ no no 0.943 0.973 0.450 8e-71
Q9C8M1332 Probable sugar phosphate/ no no 0.911 0.963 0.422 2e-70
Q9SS40355 Probable sugar phosphate/ no no 0.840 0.830 0.308 1e-27
Q5XF09308 Probable sugar phosphate/ no no 0.803 0.915 0.317 4e-27
>sp|Q3E6T0|PT525_ARATH Probable sugar phosphate/phosphate translocator At5g25400 OS=Arabidopsis thaliana GN=At5g25400 PE=2 SV=1 Back     alignment and function desciption
 Score =  636 bits (1640), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/351 (87%), Positives = 330/351 (94%), Gaps = 2/351 (0%)

Query: 1   MGKGGSLSDGVIKKILLSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSF 60
           MGKGGSLS+GVIK I++SYTYVAIWIFLSFTVIVYNKYILDKKMY+WPFPISLTMIHMSF
Sbjct: 1   MGKGGSLSEGVIKNIIISYTYVAIWIFLSFTVIVYNKYILDKKMYDWPFPISLTMIHMSF 60

Query: 61  CATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKA 120
           C+TLAFLLIKVFKFVEPV+MSRD Y  SVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKA
Sbjct: 61  CSTLAFLLIKVFKFVEPVSMSRDTYLRSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKA 120

Query: 121 LMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYGEAKFDSWGVVLQLGAVAFEAT 180
           LMPVAVYSIGV FKKE FKS+TM NM+SIS GVAIAAYGEA+FD WGV+LQLGAVAFEAT
Sbjct: 121 LMPVAVYSIGVLFKKEGFKSETMMNMLSISFGVAIAAYGEARFDVWGVILQLGAVAFEAT 180

Query: 181 RLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVELPILRETSSFHFDFVIFGT 240
           RLVMIQILLTSKGITLNPITSLYYVAPCCL FL +PWI VE PILR+TSSFHFD++IFGT
Sbjct: 181 RLVMIQILLTSKGITLNPITSLYYVAPCCLAFLFIPWIVVEFPILRDTSSFHFDYLIFGT 240

Query: 241 NSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFL 300
           NS CAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYG+AFL
Sbjct: 241 NSFCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGIAFL 300

Query: 301 GVAYYNHSKLQALKAKEAQKKAQQADEESGKLLEERDGEGGGSTKRNESQD 351
           GVAYYNH+KLQALKAKEAQK AQQ DEE+G+LLEER+G  GG  ++NE +D
Sbjct: 301 GVAYYNHAKLQALKAKEAQKTAQQVDEETGRLLEEREGNEGG--RKNEPED 349

Arabidopsis thaliana (taxid: 3702)
>sp|Q9SUV2|PT432_ARATH Probable sugar phosphate/phosphate translocator At4g32390 OS=Arabidopsis thaliana GN=At4g32390 PE=3 SV=1 Back     alignment and function description
>sp|Q9SKJ7|PT225_ARATH Probable sugar phosphate/phosphate translocator At2g25520 OS=Arabidopsis thaliana GN=At2g25520 PE=1 SV=1 Back     alignment and function description
>sp|Q9LFN3|PT511_ARATH Probable sugar phosphate/phosphate translocator At5g11230 OS=Arabidopsis thaliana GN=At5g11230 PE=2 SV=1 Back     alignment and function description
>sp|Q9LRP2|PT317_ARATH Probable sugar phosphate/phosphate translocator At3g17430 OS=Arabidopsis thaliana GN=At3g17430 PE=2 SV=1 Back     alignment and function description
>sp|Q9LNH5|PT148_ARATH Probable sugar phosphate/phosphate translocator At1g48230 OS=Arabidopsis thaliana GN=At1g48230 PE=2 SV=2 Back     alignment and function description
>sp|Q94EI9|PT314_ARATH Probable sugar phosphate/phosphate translocator At3g14410 OS=Arabidopsis thaliana GN=At3g14410 PE=2 SV=1 Back     alignment and function description
>sp|Q9C8M1|PT153_ARATH Probable sugar phosphate/phosphate translocator At1g53660 OS=Arabidopsis thaliana GN=At1g53660 PE=3 SV=2 Back     alignment and function description
>sp|Q9SS40|PT310_ARATH Probable sugar phosphate/phosphate translocator At3g10290 OS=Arabidopsis thaliana GN=At3g10290 PE=3 SV=1 Back     alignment and function description
>sp|Q5XF09|PT311_ARATH Probable sugar phosphate/phosphate translocator At3g11320 OS=Arabidopsis thaliana GN=At3g11320 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query351
255548948414 Triose phosphate/phosphate translocator, 0.994 0.842 0.911 0.0
224092450349 predicted protein [Populus trichocarpa] 0.994 1.0 0.905 0.0
357466261349 Plastidic phosphate translocator-like pr 0.994 1.0 0.888 0.0
18420914349 Nucleotide-sugar transporter family prot 0.994 1.0 0.877 1e-180
356507738346 PREDICTED: probable sugar phosphate/phos 0.982 0.997 0.874 1e-179
297812743349 hypothetical protein ARALYDRAFT_910590 [ 0.994 1.0 0.874 1e-179
15236781350 Nucleotide-sugar transporter family prot 0.994 0.997 0.883 1e-179
297802784350 hypothetical protein ARALYDRAFT_913209 [ 0.994 0.997 0.872 1e-177
297821953347 hypothetical protein ARALYDRAFT_901190 [ 0.988 1.0 0.866 1e-175
15224742347 putative phosphate/phosphoenolpyruvate t 0.988 1.0 0.866 1e-175
>gi|255548948|ref|XP_002515530.1| Triose phosphate/phosphate translocator, non-green plastid, chloroplast precursor, putative [Ricinus communis] gi|223545474|gb|EEF46979.1| Triose phosphate/phosphate translocator, non-green plastid, chloroplast precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  654 bits (1688), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/352 (91%), Positives = 339/352 (96%), Gaps = 3/352 (0%)

Query: 1   MGKGGSLSDGVIKKILLSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSF 60
           MGKGGSLSD V+KKILLSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSF
Sbjct: 65  MGKGGSLSDSVLKKILLSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSF 124

Query: 61  CATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKA 120
           CATLA LLIKVFK VEPVTMSRDLY SSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKA
Sbjct: 125 CATLAVLLIKVFKLVEPVTMSRDLYISSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKA 184

Query: 121 LMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYGEAKFDSWGVVLQLGAVAFEAT 180
           LMPVAVYSIGV  K+ESFK+DTM NM+SIS+GVA+AAYGEA+FDSWGV+LQLGAVAFEAT
Sbjct: 185 LMPVAVYSIGVMLKRESFKTDTMVNMLSISLGVAVAAYGEARFDSWGVLLQLGAVAFEAT 244

Query: 181 RLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVELPILRETSSFHFDFVIFGT 240
           RLV+IQILLTSKGITLNPITSLYYVAPCCLVFL VPWIFVE P+L+ETSSFHFDFV+FGT
Sbjct: 245 RLVLIQILLTSKGITLNPITSLYYVAPCCLVFLFVPWIFVEYPVLKETSSFHFDFVVFGT 304

Query: 241 NSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFL 300
           NSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFL
Sbjct: 305 NSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFL 364

Query: 301 GVAYYNHSKLQALKAKEAQKKAQQAD-EESGKLLEERDGEGGGSTKRNESQD 351
           GVAYYNH+KLQALKAKEAQKK+QQAD EE+G+LLEER+GEG G  KR+ESQD
Sbjct: 365 GVAYYNHAKLQALKAKEAQKKSQQADEEEAGRLLEEREGEGAG--KRSESQD 414

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224092450|ref|XP_002309616.1| predicted protein [Populus trichocarpa] gi|222855592|gb|EEE93139.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357466261|ref|XP_003603415.1| Plastidic phosphate translocator-like protein1 [Medicago truncatula] gi|355492463|gb|AES73666.1| Plastidic phosphate translocator-like protein1 [Medicago truncatula] Back     alignment and taxonomy information
>gi|18420914|ref|NP_568469.1| Nucleotide-sugar transporter family protein [Arabidopsis thaliana] gi|122213678|sp|Q3E6T0.1|PT525_ARATH RecName: Full=Probable sugar phosphate/phosphate translocator At5g25400 gi|332006053|gb|AED93436.1| Nucleotide-sugar transporter family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356507738|ref|XP_003522621.1| PREDICTED: probable sugar phosphate/phosphate translocator At5g25400-like [Glycine max] Back     alignment and taxonomy information
>gi|297812743|ref|XP_002874255.1| hypothetical protein ARALYDRAFT_910590 [Arabidopsis lyrata subsp. lyrata] gi|297320092|gb|EFH50514.1| hypothetical protein ARALYDRAFT_910590 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15236781|ref|NP_194965.1| Nucleotide-sugar transporter family protein [Arabidopsis thaliana] gi|75209423|sp|Q9SUV2.1|PT432_ARATH RecName: Full=Probable sugar phosphate/phosphate translocator At4g32390 gi|4049341|emb|CAA22566.1| putative protein [Arabidopsis thaliana] gi|7270143|emb|CAB79956.1| putative protein [Arabidopsis thaliana] gi|332660651|gb|AEE86051.1| Nucleotide-sugar transporter family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297802784|ref|XP_002869276.1| hypothetical protein ARALYDRAFT_913209 [Arabidopsis lyrata subsp. lyrata] gi|297315112|gb|EFH45535.1| hypothetical protein ARALYDRAFT_913209 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|297821953|ref|XP_002878859.1| hypothetical protein ARALYDRAFT_901190 [Arabidopsis lyrata subsp. lyrata] gi|297324698|gb|EFH55118.1| hypothetical protein ARALYDRAFT_901190 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15224742|ref|NP_180122.1| putative phosphate/phosphoenolpyruvate translocator protein [Arabidopsis thaliana] gi|75206475|sp|Q9SKJ7.1|PT225_ARATH RecName: Full=Probable sugar phosphate/phosphate translocator At2g25520 gi|4432863|gb|AAD20711.1| putative phosphate/phosphoenolpyruvate translocator protein [Arabidopsis thaliana] gi|15809998|gb|AAL06926.1| At2g25520/F13B15.18 [Arabidopsis thaliana] gi|15810281|gb|AAL07028.1| putative phosphate/phosphoenolpyruvate translocator protein [Arabidopsis thaliana] gi|27363284|gb|AAO11561.1| At2g25520/F13B15.18 [Arabidopsis thaliana] gi|330252618|gb|AEC07712.1| putative phosphate/phosphoenolpyruvate translocator protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query351
TAIR|locus:2145487349 AT5G25400 [Arabidopsis thalian 0.994 1.0 0.797 1.9e-147
TAIR|locus:2127841350 AT4G32390 [Arabidopsis thalian 0.994 0.997 0.806 1.3e-146
TAIR|locus:2040040347 AT2G25520 [Arabidopsis thalian 0.988 1.0 0.792 5.9e-144
TAIR|locus:2147957351 AT5G11230 [Arabidopsis thalian 0.985 0.985 0.767 3e-140
TAIR|locus:2093596375 AT3G17430 [Arabidopsis thalian 0.837 0.784 0.479 6.7e-72
TAIR|locus:2007745367 AT1G48230 [Arabidopsis thalian 0.957 0.915 0.432 8.6e-72
TAIR|locus:2090995340 AT3G14410 [Arabidopsis thalian 0.854 0.882 0.437 1.4e-64
TAIR|locus:2024827332 AT1G53660 [Arabidopsis thalian 0.840 0.888 0.413 6.2e-62
ASPGD|ASPL0000040742400 ugtA [Emericella nidulans (tax 0.800 0.702 0.386 4.4e-45
TAIR|locus:2074713308 AT3G11320 [Arabidopsis thalian 0.800 0.912 0.298 2.1e-29
TAIR|locus:2145487 AT5G25400 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1440 (512.0 bits), Expect = 1.9e-147, P = 1.9e-147
 Identities = 280/351 (79%), Positives = 302/351 (86%)

Query:     1 MGKGGSLSDGVIKKILLSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSF 60
             MGKGGSLS+GVIK I++SYTYVAIWIFLSFTVIVYNKYILDKKMY+WPFPISLTMIHMSF
Sbjct:     1 MGKGGSLSEGVIKNIIISYTYVAIWIFLSFTVIVYNKYILDKKMYDWPFPISLTMIHMSF 60

Query:    61 CATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKA 120
             C+TLAFLLIKVFKFVEPV+MSRD Y  SVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKA
Sbjct:    61 CSTLAFLLIKVFKFVEPVSMSRDTYLRSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKA 120

Query:   121 LMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYGEAKFDSWGVVLQLGAVAFEAT 180
             LMPVAVYSIGV FKKE FKS+TM NM+SIS GVAIAAYGEA+FD WGV+LQLGAVAFEAT
Sbjct:   121 LMPVAVYSIGVLFKKEGFKSETMMNMLSISFGVAIAAYGEARFDVWGVILQLGAVAFEAT 180

Query:   181 RLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVELPILRETSSFHFDFVIFGT 240
             RLVMIQILLTSKGITLNPITSLYYVAPCCL FL +PWI VE PILR+TSSFHFD++IFGT
Sbjct:   181 RLVMIQILLTSKGITLNPITSLYYVAPCCLAFLFIPWIVVEFPILRDTSSFHFDYLIFGT 240

Query:   241 NSXXXXXXXXXXXXXXGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFL 300
             NS              GKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYG+AFL
Sbjct:   241 NSFCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGIAFL 300

Query:   301 GVAYYNHSXXXXXXXXXXXXXXXXXDEESGKLLEERDGEGGGSTKRNESQD 351
             GVAYYNH+                 DEE+G+LLEER+G  GG  ++NE +D
Sbjct:   301 GVAYYNHAKLQALKAKEAQKTAQQVDEETGRLLEEREGNEGG--RKNEPED 349
GO:0005886 "plasma membrane" evidence=ISM
GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS
GO:0016020 "membrane" evidence=IEA
GO:0010584 "pollen exine formation" evidence=RCA
TAIR|locus:2127841 AT4G32390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2040040 AT2G25520 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2147957 AT5G11230 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2093596 AT3G17430 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2007745 AT1G48230 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2090995 AT3G14410 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2024827 AT1G53660 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ASPGD|ASPL0000040742 ugtA [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
TAIR|locus:2074713 AT3G11320 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LFN3PT511_ARATHNo assigned EC number0.84040.99140.9914nono
Q9SKJ7PT225_ARATHNo assigned EC number0.86600.98861.0nono
Q9SUV2PT432_ARATHNo assigned EC number0.88350.99430.9971nono
Q3E6T0PT525_ARATHNo assigned EC number0.87740.99431.0yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query351
pfam03151149 pfam03151, TPT, Triose-phosphate Transporter famil 9e-31
TIGR00817302 TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate 1e-14
pfam08449303 pfam08449, UAA, UAA transporter family 3e-07
PTZ00343350 PTZ00343, PTZ00343, triose or hexose phosphate/pho 1e-06
COG0697292 COG0697, RhaT, Permeases of the drug/metabolite tr 0.002
>gnl|CDD|217390 pfam03151, TPT, Triose-phosphate Transporter family Back     alignment and domain information 
 Score =  113 bits (286), Expect = 9e-31
 Identities = 53/149 (35%), Positives = 78/149 (52%), Gaps = 8/149 (5%)

Query: 167 GVVLQLGAVAFEATRLVMIQILLTSKGIT-LNPITSLYYVAPCCLVFLLVPWIFVELPIL 225
           G +L L A A  A RL++ Q LL  K  T LN +  LYY++P   + LL   +F E   L
Sbjct: 1   GFILALAASALFALRLILSQKLLKKKKGTKLNVLELLYYLSPVAFIVLLPGLLFSEGFKL 60

Query: 226 RETSSFHFD-------FVIFGTNSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAF 278
            +     F         ++   + + AF  NL+ F L+G+TS LT +VAG VK  ++I  
Sbjct: 61  GKFILKFFGDLKTSRYVLLLLLSGVLAFLYNLSAFGLLGRTSPLTSSVAGTVKRVVVIVL 120

Query: 279 SWSVIKDTVTPINLFGYGLAFLGVAYYNH 307
           S  +  D VT +N+ G  +A LGV  Y++
Sbjct: 121 SVIIFGDPVTFLNILGLAIAILGVVLYSY 149

This family includes transporters with a specificity for triose phosphate. Length = 149
>gnl|CDD|129898 TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate translocator Back     alignment and domain information
>gnl|CDD|219846 pfam08449, UAA, UAA transporter family Back     alignment and domain information
>gnl|CDD|240371 PTZ00343, PTZ00343, triose or hexose phosphate/phosphate translocator; Provisional Back     alignment and domain information
>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 351
PTZ00343350 triose or hexose phosphate/phosphate translocator; 100.0
TIGR00817302 tpt Tpt phosphate/phosphoenolpyruvate translocator 100.0
KOG1441316 consensus Glucose-6-phosphate/phosphate and phosph 100.0
PLN00411358 nodulin MtN21 family protein; Provisional 100.0
KOG1443349 consensus Predicted integral membrane protein [Fun 99.97
PRK11272292 putative DMT superfamily transporter inner membran 99.96
PF06027334 DUF914: Eukaryotic protein of unknown function (DU 99.96
PRK11689295 aromatic amino acid exporter; Provisional 99.96
PRK15430296 putative chloramphenical resistance permease RarD; 99.96
PRK11453299 O-acetylserine/cysteine export protein; Provisiona 99.96
PF08449303 UAA: UAA transporter family; InterPro: IPR013657 T 99.96
KOG1444314 consensus Nucleotide-sugar transporter VRG4/SQV-7 99.96
PRK10532293 threonine and homoserine efflux system; Provisiona 99.95
TIGR00950260 2A78 Carboxylate/Amino Acid/Amine Transporter. 99.95
KOG1442347 consensus GDP-fucose transporter [Carbohydrate tra 99.91
TIGR03340281 phn_DUF6 phosphonate utilization associated putati 99.91
TIGR00688256 rarD rarD protein. This uncharacterized protein is 99.89
COG0697292 RhaT Permeases of the drug/metabolite transporter 99.88
COG5070309 VRG4 Nucleotide-sugar transporter [Carbohydrate tr 99.88
COG5006292 rhtA Threonine/homoserine efflux transporter [Amin 99.86
KOG1580337 consensus UDP-galactose transporter related protei 99.86
KOG1581327 consensus UDP-galactose transporter related protei 99.85
KOG1582367 consensus UDP-galactose transporter related protei 99.83
KOG2765416 consensus Predicted membrane protein [Function unk 99.83
COG2962293 RarD Predicted permeases [General function predict 99.81
TIGR00776290 RhaT RhaT L-rhamnose-proton symporter family prote 99.81
KOG1583330 consensus UDP-N-acetylglucosamine transporter [Car 99.78
PF04142244 Nuc_sug_transp: Nucleotide-sugar transporter; Inte 99.76
KOG3912372 consensus Predicted integral membrane protein [Gen 99.76
KOG2234345 consensus Predicted UDP-galactose transporter [Car 99.75
KOG4510346 consensus Permease of the drug/metabolite transpor 99.73
PF03151153 TPT: Triose-phosphate Transporter family; InterPro 99.69
KOG2766336 consensus Predicted membrane protein [Function unk 99.65
PF00892126 EamA: EamA-like transporter family; InterPro: IPR0 99.35
TIGR00803222 nst UDP-galactose transporter. NSTs generally appe 99.34
KOG4314290 consensus Predicted carbohydrate/phosphate translo 99.27
COG2510140 Predicted membrane protein [Function unknown] 99.24
COG2510140 Predicted membrane protein [Function unknown] 99.14
PF00892126 EamA: EamA-like transporter family; InterPro: IPR0 99.13
PF06800269 Sugar_transport: Sugar transport protein; InterPro 99.11
PF13536113 EmrE: Multidrug resistance efflux transporter 99.1
TIGR00950260 2A78 Carboxylate/Amino Acid/Amine Transporter. 98.84
PRK15430 296 putative chloramphenical resistance permease RarD; 98.79
TIGR00688256 rarD rarD protein. This uncharacterized protein is 98.78
TIGR03340 281 phn_DUF6 phosphonate utilization associated putati 98.71
PRK11272292 putative DMT superfamily transporter inner membran 98.55
PLN00411 358 nodulin MtN21 family protein; Provisional 98.54
PRK10532293 threonine and homoserine efflux system; Provisiona 98.48
PRK15051111 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl 98.47
PRK13499345 rhamnose-proton symporter; Provisional 98.43
PRK02971129 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl 98.36
PF03151153 TPT: Triose-phosphate Transporter family; InterPro 98.34
PTZ00343 350 triose or hexose phosphate/phosphate translocator; 98.31
TIGR00817302 tpt Tpt phosphate/phosphoenolpyruvate translocator 98.22
PRK11689295 aromatic amino acid exporter; Provisional 98.22
PRK11453299 O-acetylserine/cysteine export protein; Provisiona 98.21
PF05653300 Mg_trans_NIPA: Magnesium transporter NIPA; InterPr 98.18
PF13536113 EmrE: Multidrug resistance efflux transporter 98.16
COG2962 293 RarD Predicted permeases [General function predict 98.02
PRK15051111 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl 97.97
COG4975288 GlcU Putative glucose uptake permease [Carbohydrat 97.89
PRK02971129 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl 97.87
TIGR00776290 RhaT RhaT L-rhamnose-proton symporter family prote 97.86
PF08449 303 UAA: UAA transporter family; InterPro: IPR013657 T 97.82
PF06027 334 DUF914: Eukaryotic protein of unknown function (DU 97.75
PRK10452120 multidrug efflux system protein MdtJ; Provisional 97.72
COG0697292 RhaT Permeases of the drug/metabolite transporter 97.72
PRK09541110 emrE multidrug efflux protein; Reviewed 97.62
PF04657138 DUF606: Protein of unknown function, DUF606; Inter 97.53
PRK11431105 multidrug efflux system protein; Provisional 97.5
COG2076106 EmrE Membrane transporters of cations and cationic 97.49
PRK10650109 multidrug efflux system protein MdtI; Provisional 97.49
PF06800269 Sugar_transport: Sugar transport protein; InterPro 97.44
KOG2922335 consensus Uncharacterized conserved protein [Funct 97.37
PF04142 244 Nuc_sug_transp: Nucleotide-sugar transporter; Inte 97.21
PF07857254 DUF1632: CEO family (DUF1632); InterPro: IPR012435 97.15
PRK10650109 multidrug efflux system protein MdtI; Provisional 97.14
KOG4510 346 consensus Permease of the drug/metabolite transpor 97.05
COG5006292 rhtA Threonine/homoserine efflux transporter [Amin 97.02
PRK09541110 emrE multidrug efflux protein; Reviewed 96.92
PRK11431105 multidrug efflux system protein; Provisional 96.9
PRK10452120 multidrug efflux system protein MdtJ; Provisional 96.89
PF04657138 DUF606: Protein of unknown function, DUF606; Inter 96.8
PF0089393 Multi_Drug_Res: Small Multidrug Resistance protein 96.79
COG2076106 EmrE Membrane transporters of cations and cationic 96.74
KOG1441316 consensus Glucose-6-phosphate/phosphate and phosph 96.45
TIGR00803222 nst UDP-galactose transporter. NSTs generally appe 96.45
COG3238150 Uncharacterized protein conserved in bacteria [Fun 96.41
PF05653 300 Mg_trans_NIPA: Magnesium transporter NIPA; InterPr 96.38
KOG2234 345 consensus Predicted UDP-galactose transporter [Car 96.3
PF10639113 UPF0546: Uncharacterised protein family UPF0546; I 96.26
PF0089393 Multi_Drug_Res: Small Multidrug Resistance protein 95.34
PRK13499 345 rhamnose-proton symporter; Provisional 95.34
KOG2765416 consensus Predicted membrane protein [Function unk 94.9
COG3238150 Uncharacterized protein conserved in bacteria [Fun 94.65
KOG1581327 consensus UDP-galactose transporter related protei 94.41
KOG1580 337 consensus UDP-galactose transporter related protei 94.08
COG5070309 VRG4 Nucleotide-sugar transporter [Carbohydrate tr 91.78
KOG1444314 consensus Nucleotide-sugar transporter VRG4/SQV-7 91.75
PF06379 344 RhaT: L-rhamnose-proton symport protein (RhaT); In 91.24
PF10639113 UPF0546: Uncharacterised protein family UPF0546; I 91.11
KOG4314 290 consensus Predicted carbohydrate/phosphate translo 90.71
COG4975288 GlcU Putative glucose uptake permease [Carbohydrat 89.77
KOG3912 372 consensus Predicted integral membrane protein [Gen 88.35
PRK02237109 hypothetical protein; Provisional 83.04
PF02694107 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; 81.08
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional Back     alignment and domain information 
Probab=100.00  E-value=4e-36  Score=277.35  Aligned_cols=290  Identities=18%  Similarity=0.204  Sum_probs=244.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCC-hhhHhHHHHHH
Q 018749           14 KILLSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVEPVTMS-RDLYFSSVVPI   92 (351)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~   92 (351)
                      ..++...++..|+.+|+...+.||++++    .+|+|+.++.+|++++.+.+.+++. .+.+++++.+ +++.++..++.
T Consensus        46 ~~~~~~~~~~~wy~~s~~~~~~nK~vl~----~~~~P~~l~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~llp~  120 (350)
T PTZ00343         46 FKWKLALLFLTWYALNVLYVVDNKLALN----MLPLPWTISSLQLFVGWLFALLYWA-TGFRKIPRIKSLKLFLKNFLPQ  120 (350)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHH----hCChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCCCCCHHHHHHHHHHH
Confidence            3678899999999999999999999994    7889999999999999887666554 3333334443 44456889999


Q ss_pred             HHHHHHHHhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeeecCcccchhHHHHHH
Q 018749           93 GALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYGEAKFDSWGVVLQL  172 (351)
Q Consensus        93 ~l~~~~~~~~~~~al~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l  172 (351)
                      |+++...+...+.|+++++++.+++++++.|+++++++++++|||++++++.+++++++|+.+...++.++++.|+++++
T Consensus       121 gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l  200 (350)
T PTZ00343        121 GLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAM  200 (350)
T ss_pred             HHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHH
Confidence            99987777778899999999999999999999999999999999999999999999999999999888888899999999


Q ss_pred             HHHHHHHHHHHHHHHHhhcCC---CCCChHHHHHHHhHHHHHHHHHHHHHhhchhhhh--------cCCC--cchhHHHH
Q 018749          173 GAVAFEATRLVMIQILLTSKG---ITLNPITSLYYVAPCCLVFLLVPWIFVELPILRE--------TSSF--HFDFVIFG  239 (351)
Q Consensus       173 ~s~~~~a~~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--------~~~~--~~~~~~~~  239 (351)
                      +|++++|+++++.||.+++.+   .+.++.+...+..+.+.+..+|.....|.+....        ...+  ...+..++
T Consensus       201 ~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~  280 (350)
T PTZ00343        201 LSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIF  280 (350)
T ss_pred             HHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHH
Confidence            999999999999999987532   1456777777778888888887766555432110        0111  12234566


Q ss_pred             HHHHHHHHHHHHHHHHHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhhhh
Q 018749          240 TNSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHS  308 (351)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~~~  308 (351)
                      .+++..+++|.+.+.++++++|.++++.++++|++++++|++++||++|+.+++|.++++.|+++|+..
T Consensus       281 ~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~  349 (350)
T PTZ00343        281 FSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLF  349 (350)
T ss_pred             HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence            778888888888999999999999999999999999999999999999999999999999999999864

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator Back     alignment and domain information
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism] Back     alignment and domain information
>PLN00411 nodulin MtN21 family protein; Provisional Back     alignment and domain information
>KOG1443 consensus Predicted integral membrane protein [Function unknown] Back     alignment and domain information
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional Back     alignment and domain information
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function Back     alignment and domain information
>PRK11689 aromatic amino acid exporter; Provisional Back     alignment and domain information
>PRK15430 putative chloramphenical resistance permease RarD; Provisional Back     alignment and domain information
>PRK11453 O-acetylserine/cysteine export protein; Provisional Back     alignment and domain information
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine [] Back     alignment and domain information
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PRK10532 threonine and homoserine efflux system; Provisional Back     alignment and domain information
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter Back     alignment and domain information
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein Back     alignment and domain information
>TIGR00688 rarD rarD protein Back     alignment and domain information
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only] Back     alignment and domain information
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] Back     alignment and domain information
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism] Back     alignment and domain information
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2765 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
>COG2962 RarD Predicted permeases [General function prediction only] Back     alignment and domain information
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein Back     alignment and domain information
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles Back     alignment and domain information
>KOG3912 consensus Predicted integral membrane protein [General function prediction only] Back     alignment and domain information
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only] Back     alignment and domain information
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins Back     alignment and domain information
>KOG2766 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown Back     alignment and domain information
>TIGR00803 nst UDP-galactose transporter Back     alignment and domain information
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only] Back     alignment and domain information
>COG2510 Predicted membrane protein [Function unknown] Back     alignment and domain information
>COG2510 Predicted membrane protein [Function unknown] Back     alignment and domain information
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown Back     alignment and domain information
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long Back     alignment and domain information
>PF13536 EmrE: Multidrug resistance efflux transporter Back     alignment and domain information
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter Back     alignment and domain information
>PRK15430 putative chloramphenical resistance permease RarD; Provisional Back     alignment and domain information
>TIGR00688 rarD rarD protein Back     alignment and domain information
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein Back     alignment and domain information
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional Back     alignment and domain information
>PLN00411 nodulin MtN21 family protein; Provisional Back     alignment and domain information
>PRK10532 threonine and homoserine efflux system; Provisional Back     alignment and domain information
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional Back     alignment and domain information
>PRK13499 rhamnose-proton symporter; Provisional Back     alignment and domain information
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional Back     alignment and domain information
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins Back     alignment and domain information
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional Back     alignment and domain information
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator Back     alignment and domain information
>PRK11689 aromatic amino acid exporter; Provisional Back     alignment and domain information
>PRK11453 O-acetylserine/cysteine export protein; Provisional Back     alignment and domain information
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>PF13536 EmrE: Multidrug resistance efflux transporter Back     alignment and domain information
>COG2962 RarD Predicted permeases [General function prediction only] Back     alignment and domain information
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional Back     alignment and domain information
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional Back     alignment and domain information
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein Back     alignment and domain information
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine [] Back     alignment and domain information
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function Back     alignment and domain information
>PRK10452 multidrug efflux system protein MdtJ; Provisional Back     alignment and domain information
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only] Back     alignment and domain information
>PRK09541 emrE multidrug efflux protein; Reviewed Back     alignment and domain information
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins Back     alignment and domain information
>PRK11431 multidrug efflux system protein; Provisional Back     alignment and domain information
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK10650 multidrug efflux system protein MdtI; Provisional Back     alignment and domain information
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long Back     alignment and domain information
>KOG2922 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles Back     alignment and domain information
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function Back     alignment and domain information
>PRK10650 multidrug efflux system protein MdtI; Provisional Back     alignment and domain information
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only] Back     alignment and domain information
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism] Back     alignment and domain information
>PRK09541 emrE multidrug efflux protein; Reviewed Back     alignment and domain information
>PRK11431 multidrug efflux system protein; Provisional Back     alignment and domain information
>PRK10452 multidrug efflux system protein MdtJ; Provisional Back     alignment and domain information
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins Back     alignment and domain information
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins Back     alignment and domain information
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism] Back     alignment and domain information
>TIGR00803 nst UDP-galactose transporter Back     alignment and domain information
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function Back     alignment and domain information
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins Back     alignment and domain information
>PRK13499 rhamnose-proton symporter; Provisional Back     alignment and domain information
>KOG2765 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] Back     alignment and domain information
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family Back     alignment and domain information
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function Back     alignment and domain information
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only] Back     alignment and domain information
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG3912 consensus Predicted integral membrane protein [General function prediction only] Back     alignment and domain information
>PRK02237 hypothetical protein; Provisional Back     alignment and domain information
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query351
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-05
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 46.4 bits (109), Expect = 1e-05
 Identities = 70/388 (18%), Positives = 117/388 (30%), Gaps = 134/388 (34%)

Query: 7   LSDGVIKKIL-----LSYTYVAIWIFLSFTVIVYNKYI--LDKKMYNWPFPISLTMIHMS 59
           LS   I  I+     +S T    W  LS    +  K++  + +  Y +            
Sbjct: 46  LSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKF------------ 93

Query: 60  FCATLAFLLIKVFKFV--EPVTMSRDLYFSSVVPIGALYSLSLWLSNSAYIYLSVSFIQM 117
                   L+   K    +P +M   +Y              L+  N  +   +VS +Q 
Sbjct: 94  --------LMSPIKTEQRQP-SMMTRMYIEQRDR--------LYNDNQVFAKYNVSRLQP 136

Query: 118 -------LKALMP---VAVY---SIGVTFKKESFKSDTMCNMVSISVGVAIAAYGEAKFD 164
                  L  L P   V +      G        K+  +   V +S  V      + K D
Sbjct: 137 YLKLRQALLELRPAKNVLIDGVLGSG--------KT-WVALDVCLSYKV------QCKMD 181

Query: 165 S---WGVVLQLGAVAFEATRLVMIQILLT------------SKGITLNPITSLYYVAPCC 209
               W   L L       T L M+Q LL             S  I L  I S+       
Sbjct: 182 FKIFW---LNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLR-IHSIQAE---- 233

Query: 210 LVFLLVPWIFVE-LPILRETSSF----HFDF---VIFGTNSLCAFALNLAVFLLVGKTSA 261
           L  LL    +   L +L    +      F+    ++  T         +  FL    T+ 
Sbjct: 234 LRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRF-----KQVTDFLSAATTTH 288

Query: 262 LTMN--VAGVVKD---WLLIAFSWSVIKD------TVTP--INLFGYGLAFL--GVA--- 303
           ++++     +  D    LL+ +     +D      T  P  +++       +  G+A   
Sbjct: 289 ISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIA---ESIRDGLATWD 345

Query: 304 ---YYNHSKLQ--------ALKAKEAQK 320
              + N  KL          L+  E +K
Sbjct: 346 NWKHVNCDKLTTIIESSLNVLEPAEYRK 373

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query351
2i68_A137 Protein EMRE; transmembrane protein, small-multidr 98.64
3b5d_A110 Multidrug transporter EMRE; helical membrane prote 98.43
2i68_A137 Protein EMRE; transmembrane protein, small-multidr 98.33
3b5d_A110 Multidrug transporter EMRE; helical membrane prote 98.1
>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli} Back     alignment and structure
Probab=98.64  E-value=4.5e-08  Score=76.42  Aligned_cols=67  Identities=16%  Similarity=0.113  Sum_probs=46.0

Q ss_pred             HHHHHHHHHHHHHHHhcchhHHHHHH-hhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhhhh
Q 018749          242 SLCAFALNLAVFLLVGKTSALTMNVA-GVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHS  308 (351)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~s~~-~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~~~  308 (351)
                      .++.....+++..++++.++..+..+ ..+.|++++++|+++|||++|+.+++|+.++++|+++.+..
T Consensus        37 i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (137)
T ss_dssp             HHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            33333444556778999999988777 89999999999999999999999999999999999987653
>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A* Back     alignment and structure
>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli} Back     alignment and structure
>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00