Citrus Sinensis ID: 018776

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350
Protein Sequence
MNKNEEQTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADDKPIKRTATSSFKVNIRKLSFSEREEADEEKRAPV
Secondary Structure (PSIPRED)
ccccccccccEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHcHHccccc
Secondary Structure Prediction (SSPRO)
ccccccccEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHcccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHcccccc
Coil and Loop (DISEMBL)
MNKNEEQTRSLFgisltdrpkwqqFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLIYLQGfttkqmmnpwKTYVKLSAVLMgshgltkgslAFLNYPAQLMFKSTKVLPVMVMgafipglrrkypaHEYVSALLLVVGLILFTLadaqtspnfsMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTvvglpmlippmlltGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIftkplteqhgTGLLLIAMGITlkllpaddkpikrtatSSFKVNIRKlsfsereeadeekrapv
Flexible Loop (DISEMBL)
mnkneeqtrslfgisltdrpkWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKllpaddkpikrtatssfkvnirklsfsereeadeekrapv
Low Complexity Region (SEG)
MNKNEEQTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYvsalllvvglilftlADAQTSPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADDKPIKRTATSSFKVNIRKLSFSEREEADEEKRAPV
Disordered region (IsUnstruct)
**********LFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPAD***********************************
Disordered Region (DISOPRED)
****************TDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKL***************************************
Disordered Region (DISEMBL)
*********SLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADDKPIKRTATSSFKVNIRKLSF**************
Disordered Region (DISPRO)
******QTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADD**********************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNKNEEQTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADDKPIKRTATSSFKVNIRKLSFSEREEADEEKRAPV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	350	2.2.26 [Sep-21-2011]
Q29Q28	345	UDP-galactose/UDP-glucose	yes	no	0.98	0.994	0.807	1e-159
Q9LDX3	349	UDP-galactose/UDP-glucose	no	no	0.98	0.982	0.8	1e-157
Q5R831	401	Adenosine 3'-phospho 5'-p	yes	no	0.877	0.765	0.359	4e-46
Q9H1N7	401	Adenosine 3'-phospho 5'-p	yes	no	0.877	0.765	0.359	6e-46
Q922Q5	369	Adenosine 3'-phospho 5'-p	no	no	0.877	0.831	0.366	3e-45
Q17CE7	382	Adenosine 3'-phospho 5'-p	N/A	no	0.922	0.845	0.342	6e-43
Q7Q5D4	377	Adenosine 3'-phospho 5'-p	yes	no	0.94	0.872	0.329	7e-43
Q29EY2	392	Adenosine 3'-phospho 5'-p	yes	no	0.888	0.793	0.345	1e-42
Q9VVD9	396	Adenosine 3'-phospho 5'-p	yes	no	0.851	0.752	0.352	2e-42
Q61LC0	363	Adenosine 3'-phospho 5'-p	N/A	no	0.86	0.829	0.336	3e-39

>sp|Q29Q28|UTR2_ARATH UDP-galactose/UDP-glucose transporter 2 OS=Arabidopsis thaliana GN=UTR2 PE=2 SV=1

 Score =  560 bits (1443), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 281/348 (80%), Positives = 314/348 (90%), Gaps = 5/348 (1%)

Query: 4   NEEQTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQG 63
            EEQTRSLFGISL+D+P WQQFLIC+SGFFFGYLVNGVCEEYVYNRLQFS+GWYFTFIQG
Sbjct: 2   KEEQTRSLFGISLSDKPTWQQFLICTSGFFFGYLVNGVCEEYVYNRLQFSFGWYFTFIQG 61

Query: 64  FVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLP 123
           FVYL LIYLQGFTTK ++NP +TYVKLSAVLMGSHGLTKGSLA+LNYPAQ+MFKSTKVLP
Sbjct: 62  FVYLFLIYLQGFTTKHIVNPMRTYVKLSAVLMGSHGLTKGSLAYLNYPAQIMFKSTKVLP 121

Query: 124 VMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDS 183
           VM+MGAFIPGLRRKYP HEY+SA LLV+GLILFTLADAQ SPNFSMIG++MI+GALIMD+
Sbjct: 122 VMIMGAFIPGLRRKYPVHEYISAFLLVLGLILFTLADAQMSPNFSMIGIMMITGALIMDA 181

Query: 184 FLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVL 243
           FLGNLQEAIFTMNPETTQMEMLFCSTVVGLP L  PM+LTGE+F+AW +C+QH YVYGVL
Sbjct: 182 FLGNLQEAIFTMNPETTQMEMLFCSTVVGLPFLFVPMVLTGEVFRAWTACAQHPYVYGVL 241

Query: 244 VFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLI 303
           VFEAMATFIGQVSVLSLIALFGAATTA++TTARK VTLLLSYLIFTKPLTEQHG+GLLLI
Sbjct: 242 VFEAMATFIGQVSVLSLIALFGAATTALITTARKGVTLLLSYLIFTKPLTEQHGSGLLLI 301

Query: 304 AMGITLKLLPADDK-PIKRTATSSFKVNIRKLSFSEREEADEEKRAPV 350
           AMGI LK++P D K P K  A  + ++        +REE DEE+++ V
Sbjct: 302 AMGIVLKMVPMDSKAPAKIPARPAVRIAGGD---GDREE-DEERKSLV 345

Sugar transporter involved in the transport of UDP-galactose form the cytoplasm into the Golgi apparatus.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9LDX3|UTR4_ARATH UDP-galactose/UDP-glucose transporter 4 OS=Arabidopsis thaliana GN=UTR4 PE=2 SV=1

 Score =  554 bits (1427), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 276/345 (80%), Positives = 306/345 (88%), Gaps = 2/345 (0%)

Query: 3   KNEEQTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQ 62
            +EEQ   LFGI L+D+P+WQQFLICSSGFFFGYLVNG+CEEYVYNRL+FSYGWYFTF Q
Sbjct: 4   NSEEQMIKLFGIPLSDKPRWQQFLICSSGFFFGYLVNGICEEYVYNRLKFSYGWYFTFAQ 63

Query: 63  GFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVL 122
           G VY+ LIY+ GF TKQM+NPWKTYVKLS VLMGSHGLTKGSLA+LNYPAQ+MFKSTKVL
Sbjct: 64  GLVYIALIYMYGFRTKQMVNPWKTYVKLSGVLMGSHGLTKGSLAYLNYPAQIMFKSTKVL 123

Query: 123 PVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMD 182
           PVMVMGAFIPGLRRKYP HEY+SA+LLV+GLILFTLADA TSPNFS+IGV+MISGALIMD
Sbjct: 124 PVMVMGAFIPGLRRKYPVHEYISAMLLVIGLILFTLADAHTSPNFSIIGVMMISGALIMD 183

Query: 183 SFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGV 242
           +FLGNLQEAIFTMNPETTQMEMLFCSTVVGLP L+ PM+LTGELF AWNSC+QH YVYGV
Sbjct: 184 AFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPFLLAPMILTGELFTAWNSCAQHPYVYGV 243

Query: 243 LVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLL 302
           LVFEAMATFIGQVSVLSLIALFGAATTAM+TTARKAVTLLLSYLIFTKPLTEQHGTGLLL
Sbjct: 244 LVFEAMATFIGQVSVLSLIALFGAATTAMITTARKAVTLLLSYLIFTKPLTEQHGTGLLL 303

Query: 303 IAMGITLKLLPADDKPIKRTATSSFKVNIRKLSFSEREEADEEKR 347
           I MGI LK++P  +   K + +      + ++ F   +E DEE R
Sbjct: 304 IFMGIILKMVPDPNPNPKSSGSGQTPGKLERVKF--EKEDDEESR 346

Sugar transporter involved in the transport of nucleotide-sugars from cytoplasm into the Golgi and/or the endoplasmic reticulum.

Arabidopsis thaliana (taxid: 3702)

>sp|Q5R831|S35B3_PONAB Adenosine 3'-phospho 5'-phosphosulfate transporter 2 OS=Pongo abelii GN=SLC35B3 PE=2 SV=1

 Score =  185 bits (470), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 113/314 (35%), Positives = 183/314 (58%), Gaps = 7/314 (2%)

Query: 11  LFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQF-SYGWYFTFIQGFVYLV- 68
           + G++L+   K  QF IC +G F  YL+ G  +E +++   F SYGWY T +Q   Y + 
Sbjct: 67  VLGMNLSKFNKLTQFFICVAGVFVFYLIYGYLQELIFSVEGFKSYGWYLTLVQFAFYSIF 126

Query: 69  -LIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVM 127
            LI LQ    K+   P KTY+ ++ + +G+ GL+  SL +LNYP Q++FK  K++PVM+ 
Sbjct: 127 GLIELQPIQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMLG 186

Query: 128 GAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGN 187
           G FI G  ++Y   +  +A+ + +GLI FTLAD+  +PNF++ GV++IS AL  D+ +GN
Sbjct: 187 GVFIQG--KRYNVADVSAAICMSLGLIWFTLADSTIAPNFNLTGVVLISLALCADAVIGN 244

Query: 188 LQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQH-LYVYGVLVFE 246
           +QE    ++   +  EM+  S  +G   ++  +  T  L  A   C+++ +  YG     
Sbjct: 245 VQEKAMKLH-NASNSEMVLYSYSIGFVYILLGLTCTSGLGPAVTFCAKNPVRTYGYAFLF 303

Query: 247 AMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMG 306
           ++  + G   VL+LI +FGA     VTT RKA+T++LS++ F KP T Q+    LL+ +G
Sbjct: 304 SLTGYFGISFVLALIKIFGALIAVTVTTGRKAMTIVLSFIFFAKPFTFQYVWSGLLVFLG 363

Query: 307 ITLKLLPADDKPIK 320
           I L +   +   I+
Sbjct: 364 IFLNVYSKNMDKIR 377

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi. Compensates for the insufficient expression of SLC35B2/PAPST1 during the synthesis of sulfated glycoconjugates in the colon.

Pongo abelii (taxid: 9601)

>sp|Q9H1N7|S35B3_HUMAN Adenosine 3'-phospho 5'-phosphosulfate transporter 2 OS=Homo sapiens GN=SLC35B3 PE=1 SV=1

 Score =  185 bits (469), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 113/314 (35%), Positives = 183/314 (58%), Gaps = 7/314 (2%)

Query: 11  LFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQF-SYGWYFTFIQGFVYLV- 68
           + G++L+   K  QF IC +G F  YL+ G  +E +++   F S GWY T +Q   Y + 
Sbjct: 67  VLGMNLSKFNKLTQFFICVAGVFVFYLIYGYLQELIFSVEGFKSCGWYLTLVQFAFYSIF 126

Query: 69  -LIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVM 127
            LI LQ    K+   P KTY+ ++ + +G+ GL+  SL +LNYP Q++FK  K++PVM+ 
Sbjct: 127 GLIELQLIQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMLG 186

Query: 128 GAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGN 187
           G FI G  ++Y   +  +A+ + +GLI FTLAD+ T+PNF++ GV++IS AL  D+ +GN
Sbjct: 187 GVFIQG--KRYNVADVSAAICMSLGLIWFTLADSTTAPNFNLTGVVLISLALCADAVIGN 244

Query: 188 LQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQH-LYVYGVLVFE 246
           +QE    ++   +  EM+  S  +G   ++  +  T  L  A   C+++ +  YG     
Sbjct: 245 VQEKAMKLH-NASNSEMVLYSYSIGFVYILLGLTCTSGLGPAVTFCAKNPVRTYGYAFLF 303

Query: 247 AMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMG 306
           ++  + G   VL+LI +FGA     VTT RKA+T++LS++ F KP T Q+    LL+ +G
Sbjct: 304 SLTGYFGISFVLALIKIFGALIAVTVTTGRKAMTIVLSFIFFAKPFTFQYVWSGLLVVLG 363

Query: 307 ITLKLLPADDKPIK 320
           I L +   +   I+
Sbjct: 364 IFLNVYSKNMDKIR 377

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi. Compensates for the insufficient expression of SLC35B2/PAPST1 during the synthesis of sulfated glycoconjugates in the colon.

Homo sapiens (taxid: 9606)

>sp|Q922Q5|S35B3_MOUSE Adenosine 3'-phospho 5'-phosphosulfate transporter 2 OS=Mus musculus GN=Slc35b3 PE=2 SV=1

 Score =  182 bits (462), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 115/314 (36%), Positives = 183/314 (58%), Gaps = 7/314 (2%)

Query: 11  LFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFS-YGWYFTFIQGFVYLV- 68
           + G++L+   K  QFLIC +G F  YL+ G  +E +++   F  YGWY T +Q   Y V 
Sbjct: 35  VLGVNLSKFSKLTQFLICVAGVFVFYLIYGYLQELIFSVEGFKPYGWYLTLVQFAFYSVF 94

Query: 69  -LIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVM 127
            LI LQ    ++   P KTY+ ++ + +G+ GL+  SL +LNYP Q++FK  K++PVM+ 
Sbjct: 95  GLIELQLTQDRRRRIPGKTYMLIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMLG 154

Query: 128 GAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGN 187
           G FI G  ++Y   +  +A+ + +GLI FTLAD+  +PNF++ GV++IS AL  D+ +GN
Sbjct: 155 GVFIQG--KRYNLADVSAAVCMSLGLIWFTLADSTIAPNFNLTGVMLISLALCADAVIGN 212

Query: 188 LQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQH-LYVYGVLVFE 246
           +QE    ++   +  EM+  S  +G   ++  +  T  L  A   CS++ +  YG     
Sbjct: 213 VQEKAMKLH-NASNSEMVLYSYSIGFVYILLGLSCTSGLGPAVAFCSKNPVGTYGYAFLF 271

Query: 247 AMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMG 306
           ++  + G   VL+LI +FGA     VTT RKA+T++LS+L F KP T Q+    LL+ +G
Sbjct: 272 SLTGYFGISFVLALIKIFGALLAVTVTTGRKAMTVVLSFLFFAKPFTFQYIWSGLLVVLG 331

Query: 307 ITLKLLPADDKPIK 320
           I L +   +   I+
Sbjct: 332 IFLNVYSKNMDKIR 345

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi. Compensates for the insufficient expression of SLC35B2/PAPST1 during the synthesis of sulfated glycoconjugates in the colon.

Mus musculus (taxid: 10090)

>sp|Q17CE7|S35B3_AEDAE Adenosine 3'-phospho 5'-phosphosulfate transporter 2 OS=Aedes aegypti GN=Papst2 PE=3 SV=1

 Score =  175 bits (443), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 115/336 (34%), Positives = 192/336 (57%), Gaps = 13/336 (3%)

Query: 2   NKNEEQTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFS-YGWYFTF 60
           +++ ++ + LF   LT      +FL+C +G F  YL+ G  +E ++    F  YGW+ T 
Sbjct: 32  DEDRKEVKILF-FDLTYYNTTTKFLLCCAGVFVLYLLYGYMQELIFTLDGFKPYGWFLTL 90

Query: 61  IQGFVYLVLIYLQ-GFTTKQMMN--PWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFK 117
           +Q   Y V  Y++    +K++    P KTYV L+ + +G+ GL+  SL +LNYP Q++FK
Sbjct: 91  VQFAYYTVFGYVERSLESKRVPRCIPMKTYVLLAFLTLGTMGLSNSSLGYLNYPTQVIFK 150

Query: 118 STKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISG 177
             K++PV++    I G  +K+   ++++A+ + +GL LFTLAD+Q SPNF+  GV++IS 
Sbjct: 151 CCKLVPVLIGSILIQG--KKHGPLDFLAAIAMCLGLTLFTLADSQVSPNFNPFGVLLISL 208

Query: 178 ALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQH- 236
           AL+ D+ +GN+QE     + +    E++  S  +G   L   MLLTG LF     C ++ 
Sbjct: 209 ALLCDAAIGNVQEKAMREH-KAPNNEVVIYSYGIGFVYLSVIMLLTGNLFSGITFCMKYP 267

Query: 237 LYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQH 296
           +  +G     +++ ++G   VL+L+   GA   A VTTARKAVT+ LS++ F+KP T  +
Sbjct: 268 VETFGYAFLFSLSGYLGIQIVLTLVRTCGAPLAATVTTARKAVTIALSFVFFSKPFTINY 327

Query: 297 GTGLLLIAMGITLKLLPADDK----PIKRTATSSFK 328
               L++ +GI L +     K     + RTA   ++
Sbjct: 328 LWSGLIVVLGIYLNVYSKRSKLTFADLNRTAERIYR 363

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi. Essential for viability. Involved in glycosaminoglycan synthesis and the subsequent signaling. May be involved in hh and dpp signaling by controlling the sulfation of heparan sulfate (HS).

Aedes aegypti (taxid: 7159)

>sp|Q7Q5D4|S35B3_ANOGA Adenosine 3'-phospho 5'-phosphosulfate transporter 2 OS=Anopheles gambiae GN=Papst2 PE=3 SV=4

 Score =  174 bits (442), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 115/349 (32%), Positives = 186/349 (53%), Gaps = 20/349 (5%)

Query: 1   MNKNEEQTRS--------LFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQF 52
           +N+N  + R         +    LT   +  QFL+C  G F  YLV G  +E ++    F
Sbjct: 16  LNRNRHRDRDQSPEREIKILFFDLTHYNRTTQFLLCCGGVFALYLVYGYMQELIFTLEGF 75

Query: 53  S-YGWYFTFIQGFVYLVLIYLQG---FTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFL 108
             YGWY T +Q   Y    Y++     TT     P +TY  L+ + +G+ GL+  S+ +L
Sbjct: 76  RPYGWYLTLVQFAYYTAFGYIERSVERTTVPRCIPLRTYALLAFLTLGTMGLSNSSVGYL 135

Query: 109 NYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFS 168
           NYP Q++FK  K++PV++    I G  +K+   ++ +A  + +GLILFTLAD+Q  P+F+
Sbjct: 136 NYPTQVIFKCCKLIPVLIGSVLIQG--KKHGPMDFFAATAMCLGLILFTLADSQVQPDFN 193

Query: 169 MIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFK 228
             GV +IS AL+ D+ +GN+QE     +      E++  S  +G   L   MLL+G L +
Sbjct: 194 RFGVFLISLALLCDAAIGNVQEKAMREH-RAPNNEVVIYSYGIGFVYLAVIMLLSGHLVQ 252

Query: 229 AWNSCSQH-LYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLI 287
               C+++ +  YG     ++  ++G   VL+L+   GA   A VTTARKAVT+ LS++ 
Sbjct: 253 GVAFCARYPMETYGYAFLFSLTGYLGIQIVLTLVRTCGAPLAATVTTARKAVTIALSFVF 312

Query: 288 FTKPLTEQHGTGLLLIAMGITLKLLPADDK----PIKRTATSSFKVNIR 332
           F+KP T Q+    L++  GI L +     K     + R A++ ++  +R
Sbjct: 313 FSKPFTIQYLWSGLIVVFGIYLNVYSKRSKLTFADLGRMASTVYRWVLR 361

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi. Essential for viability. Involved in glycosaminoglycan synthesis and the subsequent signaling. May be involved in hh and dpp signaling by controlling the sulfation of heparan sulfate (HS).

Anopheles gambiae (taxid: 7165)

>sp|Q29EY2|S35B3_DROPS Adenosine 3'-phospho 5'-phosphosulfate transporter 2 OS=Drosophila pseudoobscura pseudoobscura GN=Papst2 PE=3 SV=2

 Score =  174 bits (440), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/330 (34%), Positives = 185/330 (56%), Gaps = 19/330 (5%)

Query: 15  SLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFS-YGWYFTFIQGFVY----LVL 69
            LT   +  QFL+  +G F  Y++ G  +E ++    F  +GW+ T +Q   Y    LV 
Sbjct: 48  DLTHYNQTTQFLLSCAGVFILYILYGYLQELIFTVEGFKPFGWFLTLVQFGYYIGFGLVE 107

Query: 70  IYLQGFTT--KQMMN--------PWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKST 119
             L+ + +  + + N        P KTY+ L+A+ +G+ GL+  SL +LNYP Q++FK  
Sbjct: 108 RRLEAYRSGRRSLWNVEPAPRCIPMKTYLVLAALTLGTMGLSNSSLGYLNYPTQVIFKCC 167

Query: 120 KVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGAL 179
           K++PV+V    I G  ++Y   ++ +A  + +GL  FTLAD+Q +PNF+++GV MISGAL
Sbjct: 168 KLIPVLVGSILIQG--KRYGPLDFAAASCMCIGLAWFTLADSQMTPNFNLLGVAMISGAL 225

Query: 180 IMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQH-LY 238
           + D+ +GN+QE     +   +  E++F S  +G   L   ML+TG  F  +  C +H L 
Sbjct: 226 LCDAAIGNVQEKAMKEHKAPSS-EVVFYSYGLGFVYLFVIMLVTGNFFSGFAFCLEHPLQ 284

Query: 239 VYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGT 298
            +G     +++ ++G   VL+L+   GA   A VTTARKAVT+  S+++F+KP T Q+  
Sbjct: 285 TFGYGFLFSLSGYLGIQFVLALVRSSGAPIAATVTTARKAVTIAFSFVLFSKPFTVQYLW 344

Query: 299 GLLLIAMGITLKLLPADDKPIKRTATSSFK 328
             L++ +GI L +    +K       S FK
Sbjct: 345 SGLIVVLGIYLNVYSKKNKLTFADIRSRFK 374

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi. Essential for viability. Involved in glycosaminoglycan synthesis and the subsequent signaling. May be involved in hh and dpp signaling by controlling the sulfation of heparan sulfate (HS).

Drosophila pseudoobscura pseudoobscura (taxid: 46245)

>sp|Q9VVD9|S35B3_DROME Adenosine 3'-phospho 5'-phosphosulfate transporter 2 OS=Drosophila melanogaster GN=Papst2 PE=1 SV=2

 Score =  172 bits (437), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/321 (35%), Positives = 181/321 (56%), Gaps = 23/321 (7%)

Query: 15  SLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFS-YGWYFTFIQGFVY----LVL 69
            LT   +  QFL+  +G FF Y++ G  +E ++    F  YGW+ T +Q   Y    LV 
Sbjct: 52  DLTYYNRTTQFLLSCAGVFFLYILYGYLQELIFTVEGFKPYGWFLTLVQFGYYIGFGLVE 111

Query: 70  IYLQGFTT----------KQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKST 119
             L+G+            +    P +TY+ L+A+ +G+ GL+  SL +LNYP Q++FK  
Sbjct: 112 RRLEGYRISGGSFWNIEPEPRCIPMRTYLILAALTLGTMGLSNSSLGYLNYPTQVIFKCC 171

Query: 120 KVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGAL 179
           K++PV+V    I G  ++Y   ++ +A  + +GL  FTLAD+Q +PNF+++GV MISGAL
Sbjct: 172 KLIPVLVGSILIQG--KRYGLLDFAAATCMCIGLAWFTLADSQMTPNFNLLGVAMISGAL 229

Query: 180 IMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQH--- 236
           + D+ +GN+QE       +    E++F S  +G   L   ML+TG  F  +  C +H   
Sbjct: 230 LCDAAIGNVQEKAMR-EFKAPSSEVVFYSYGLGFVYLFVIMLVTGNFFSGFAFCLEHPVE 288

Query: 237 LYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQH 296
            + YG L   +++ ++G   VL+L+   GA   A VTTARKAVT+  S+++F+KP T Q+
Sbjct: 289 TFGYGFLF--SLSGYLGIQFVLALVRSSGAPIAATVTTARKAVTIAFSFVLFSKPFTLQY 346

Query: 297 GTGLLLIAMGITLKLLPADDK 317
               L++ +GI L +    +K
Sbjct: 347 LWSGLIVVLGIYLNVYSKRNK 367

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi. Essential for viability. Involved in glycosaminoglycan synthesis and the subsequent signaling. May be involved in hh and dpp signaling by controlling the sulfation of heparan sulfate (HS).

Drosophila melanogaster (taxid: 7227)

>sp|Q61LC0|S35B3_CAEBR Adenosine 3'-phospho 5'-phosphosulfate transporter 2 OS=Caenorhabditis briggsae GN=pst-2 PE=3 SV=1

 Score =  162 bits (411), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/318 (33%), Positives = 178/318 (55%), Gaps = 17/318 (5%)

Query: 3   KNEEQTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFS-YGWYFTFI 61
           K++ +   L G ++  +PKW QF++ S   F  YL  G  +E ++       +GW  T I
Sbjct: 20  KDDVEPIHLLGFNIARKPKWLQFVLLSGAIFILYLGYGYMQELIFKLPGMKPFGWTLTLI 79

Query: 62  QGFVYLVLIYLQG---FTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKS 118
           Q  +Y    Y +      TK+M+ PW+ Y  ++   + + GL+  S+ +LNYP Q++FK 
Sbjct: 80  QFVIYSGCGYAECAVWHNTKRMI-PWRIYGVIAFFTVATMGLSNASVGYLNYPTQVIFKC 138

Query: 119 TKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGA 178
            K++PV++ G  I G  ++Y   +  +A+L+ +G+I+FTLAD + SPNF   G IMISGA
Sbjct: 139 CKLIPVLIGGILIQG--KRYGWIDISAAILMSLGIIMFTLADNKVSPNFDSRGYIMISGA 196

Query: 179 LIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAW-----NSC 233
           L+ D+ +GN+QE        ++  E++  S  +G   +   ++L+GE+F A      NS 
Sbjct: 197 LLADAVIGNIQEKNMKKYGGSSN-EVVLYSYGIGSVFIFTYVVLSGEIFSAIPFFLENSW 255

Query: 234 SQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLT 293
               Y    L+F  +  ++G   VL+ I +FGA     VTT RKA+T++LS+L+F+KP T
Sbjct: 256 KTFGY---ALIFSFLG-YLGVNVVLTHIKVFGALVAVTVTTLRKALTIILSFLLFSKPFT 311

Query: 294 EQHGTGLLLIAMGITLKL 311
            ++     ++ + I L L
Sbjct: 312 IEYVYAGSVVMLAIYLNL 329

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi.

Caenorhabditis briggsae (taxid: 6238)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	350
225453883	348	PREDICTED: adenosine 3'-phospho 5'-phosp	0.982	0.988	0.875	1e-170
356532050	358	PREDICTED: adenosine 3'-phospho 5'-phosp	0.991	0.969	0.840	1e-167
224127530	359	predicted protein [Populus trichocarpa]	0.982	0.958	0.845	1e-166
356568332	358	PREDICTED: adenosine 3'-phospho 5'-phosp	0.988	0.966	0.840	1e-166
255541442	350	Adenosine 3'-phospho 5'-phosphosulfate t	0.98	0.98	0.847	1e-165
449432205	355	PREDICTED: UDP-galactose/UDP-glucose tra	0.98	0.966	0.841	1e-164
147845004	343	hypothetical protein VITISV_031735 [Viti	0.968	0.988	0.855	1e-164
356532052	371	PREDICTED: adenosine 3'-phospho 5'-phosp	0.991	0.935	0.810	1e-164
225426765	350	PREDICTED: adenosine 3'-phospho 5'-phosp	0.98	0.98	0.850	1e-163
224074825	352	predicted protein [Populus trichocarpa]	0.985	0.980	0.818	1e-163

>gi|225453883|ref|XP_002273090.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 2 [Vitis vinifera] gi|296089139|emb|CBI38842.3| unnamed protein product [Vitis vinifera]

 Score =  603 bits (1556), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 302/345 (87%), Positives = 319/345 (92%), Gaps = 1/345 (0%)

Query: 3   KNEEQTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQ 62
           KNEEQ RSLFGISL+DRPKWQQFLICSSGFFFGYLVNG+CEEYVYNRLQFSYGWYFTF+Q
Sbjct: 2   KNEEQARSLFGISLSDRPKWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQ 61

Query: 63  GFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVL 122
           GFVYLVLIY QGFTTKQM+NPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVL
Sbjct: 62  GFVYLVLIYFQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVL 121

Query: 123 PVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMD 182
           PVMVMGAFIPGLRRKYPAHEYVSA+LLVVGLILFTLADA TSPNFS+IGV+M+SGAL+MD
Sbjct: 122 PVMVMGAFIPGLRRKYPAHEYVSAVLLVVGLILFTLADAHTSPNFSVIGVLMVSGALVMD 181

Query: 183 SFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGV 242
           SFLGNLQEAIFT+NP+TTQMEMLFCSTV+GLP LIPPML TGELFKAWNSCSQHLYVYGV
Sbjct: 182 SFLGNLQEAIFTLNPDTTQMEMLFCSTVIGLPFLIPPMLFTGELFKAWNSCSQHLYVYGV 241

Query: 243 LVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLL 302
           LVFEAMATFIGQVSVLSLIA+FGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHG+GLLL
Sbjct: 242 LVFEAMATFIGQVSVLSLIAIFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGSGLLL 301

Query: 303 IAMGITLKLLPADDKPIKRTATSSFKVNIRKLSFSEREEADEEKR 347
           IAMGI LKLLP D+KP K+ +  S         F   EE  EE R
Sbjct: 302 IAMGIVLKLLP-DNKPYKKASLESPTTEKTANPFPREEEKSEEMR 345

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532050|ref|XP_003534587.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 2-like isoform 1 [Glycine max]

 Score =  592 bits (1527), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 300/357 (84%), Positives = 322/357 (90%), Gaps = 10/357 (2%)

Query: 3   KNEEQTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQ 62
           KNEEQ RSLFGISL+DRP+WQQFLICSSGFFFGYLVNG+CEEYVYNRL FSYGWYFTF+Q
Sbjct: 2   KNEEQARSLFGISLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLHFSYGWYFTFVQ 61

Query: 63  GFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVL 122
           GFVYL LIYLQGFT+KQM+NPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQ+MFKSTKVL
Sbjct: 62  GFVYLCLIYLQGFTSKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVL 121

Query: 123 PVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMD 182
           PVM+MGAFIPGLRRKYP HEY+SA+LLVVGLILFTLADAQTSPNFSMIGVIMISGAL+MD
Sbjct: 122 PVMIMGAFIPGLRRKYPLHEYISAILLVVGLILFTLADAQTSPNFSMIGVIMISGALVMD 181

Query: 183 SFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGV 242
           SFLGNLQEAIFTMNPETTQMEMLFCSTVVGLP LIPPML TGELFKAW SCSQH YVYGV
Sbjct: 182 SFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPFLIPPMLFTGELFKAWTSCSQHPYVYGV 241

Query: 243 LVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLL 302
           LVFEAMATFIGQVSVLSLIA+FGAATTAM+TTARKAVTLLLSYLIFTKPLTEQHG+GLLL
Sbjct: 242 LVFEAMATFIGQVSVLSLIAIFGAATTAMITTARKAVTLLLSYLIFTKPLTEQHGSGLLL 301

Query: 303 IAMGITLKLLPADDK----PIKRTATSSFKVNIRKLSFSER-----EEADEEKRAPV 350
           IAMGITLK+LP D+K      KR  TSS + N  K +  E         + ++R P+
Sbjct: 302 IAMGITLKMLP-DNKFTSTKTKRVLTSSARDNGAKSTSDEELGTLPNSGENDERRPL 357

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127530|ref|XP_002320097.1| predicted protein [Populus trichocarpa] gi|222860870|gb|EEE98412.1| predicted protein [Populus trichocarpa]

 Score =  591 bits (1524), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 301/356 (84%), Positives = 325/356 (91%), Gaps = 12/356 (3%)

Query: 3   KNEEQTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQ 62
           KNEEQ RSLFGISLTDRP+W+QFLICSSGFFFGYLVNG+CEEYVYNRLQFSYGWYFTF+Q
Sbjct: 2   KNEEQERSLFGISLTDRPRWKQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQ 61

Query: 63  GFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVL 122
            FVY++LIYLQGFT KQM+NPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQ+MFKSTKVL
Sbjct: 62  SFVYVLLIYLQGFTPKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVL 121

Query: 123 PVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMD 182
           PVMVMGAFIPGLRRKYPAHEY SALLLV GLI+FTLADA+TSPNFS+IGV+MISGALIMD
Sbjct: 122 PVMVMGAFIPGLRRKYPAHEYASALLLVAGLIIFTLADAKTSPNFSIIGVLMISGALIMD 181

Query: 183 SFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGV 242
           +FLGNLQEAIFT++PETTQMEMLFCS+VVGLP LIPPM+LTGELFKAWNSCSQH YVY V
Sbjct: 182 AFLGNLQEAIFTLSPETTQMEMLFCSSVVGLPFLIPPMVLTGELFKAWNSCSQHPYVYVV 241

Query: 243 LVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLL 302
           LVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLL
Sbjct: 242 LVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLL 301

Query: 303 IAMGITLKLLPADDKPIKRTATS-SFKVNIRKLSFSEREE----------ADEEKR 347
           IAMGITLKLLP D  P KR+++S + K  I K S ++ E+           DEEKR
Sbjct: 302 IAMGITLKLLP-DKNPYKRSSSSITKKAKIEKPSTNDEEKRVFQLEIEAAEDEEKR 356

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356568332|ref|XP_003552365.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 2-like isoform 1 [Glycine max]

 Score =  590 bits (1520), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 301/358 (84%), Positives = 323/358 (90%), Gaps = 12/358 (3%)

Query: 3   KNEEQTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQ 62
           KNEEQ RSLFGISL+DRP+WQQFLICSSGFFFGYLVNG+CEEYVYNRL FSYGWYFTF+Q
Sbjct: 2   KNEEQARSLFGISLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLHFSYGWYFTFVQ 61

Query: 63  GFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVL 122
           GFVYL LIYLQGFT+KQM+NPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQ+MFKSTKVL
Sbjct: 62  GFVYLFLIYLQGFTSKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVL 121

Query: 123 PVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMD 182
           PVM+MGAFIPGLRRKYP HEY+SA+LLVVGLILFTLADAQTSPNFSMIGVIMISGAL+MD
Sbjct: 122 PVMIMGAFIPGLRRKYPLHEYISAILLVVGLILFTLADAQTSPNFSMIGVIMISGALVMD 181

Query: 183 SFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGV 242
           SFLGNLQEAIFTMNPETTQMEMLFCSTVVGLP LIPPML TGELFKAW SCSQH YVYGV
Sbjct: 182 SFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPFLIPPMLFTGELFKAWTSCSQHPYVYGV 241

Query: 243 LVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLL 302
           LVFEAMATFIGQVSVLSLIA+FGAATTAM+TTARKAVTLLLSYLIFTKPLTEQHG+GLLL
Sbjct: 242 LVFEAMATFIGQVSVLSLIAIFGAATTAMITTARKAVTLLLSYLIFTKPLTEQHGSGLLL 301

Query: 303 IAMGITLKLLPADDK----PIKRTATSSFKVNIRKLSFSERE------EADEEKRAPV 350
           IAMGITLK+LP D K      KR  TSS + NI   S ++ E        + ++R P+
Sbjct: 302 IAMGITLKMLP-DSKFTSTKTKRVLTSSAR-NIGAKSTNDEELGTLPNSGENDERRPL 357

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255541442|ref|XP_002511785.1| Adenosine 3'-phospho 5'-phosphosulfate transporter, putative [Ricinus communis] gi|223548965|gb|EEF50454.1| Adenosine 3'-phospho 5'-phosphosulfate transporter, putative [Ricinus communis]

 Score =  588 bits (1515), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 294/347 (84%), Positives = 322/347 (92%), Gaps = 4/347 (1%)

Query: 3   KNEEQTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQ 62
           KNEE+ RSLFGISL+DRP+WQQFLICSSGFFFGYLVNG+CEEYVYNRLQFSYGWYFTF+Q
Sbjct: 2   KNEEKGRSLFGISLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQ 61

Query: 63  GFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVL 122
            FVY+ LIYLQGFT  QM+NPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQ+MFKSTKVL
Sbjct: 62  IFVYIFLIYLQGFTPAQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVL 121

Query: 123 PVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMD 182
           PVMVMGAFIPGLRR+YP HEYVSALLLVVGLILFTLADA+TSPNF  IGV+MISGALIMD
Sbjct: 122 PVMVMGAFIPGLRRRYPVHEYVSALLLVVGLILFTLADAKTSPNFHTIGVVMISGALIMD 181

Query: 183 SFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGV 242
           +FLGNLQEAIFT+NPETTQMEMLFCS+VVGLP LIPPM+LTGELF+AWNSCSQH YVYGV
Sbjct: 182 AFLGNLQEAIFTINPETTQMEMLFCSSVVGLPFLIPPMILTGELFRAWNSCSQHPYVYGV 241

Query: 243 LVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLL 302
           L+FEAMATF+GQVSVLSLIALFGAATTAMVTTARKAVTLLLSY+IFTKPLTEQHGTGLLL
Sbjct: 242 LIFEAMATFVGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYMIFTKPLTEQHGTGLLL 301

Query: 303 IAMGITLKLLPADDKPIKRTATSSFKVNIRKLSFSERE---EADEEK 346
           IAMGITLKLLP D+ P KR +++S K  I K S ++++    + EEK
Sbjct: 302 IAMGITLKLLP-DNNPHKRNSSNSSKTKIHKSSSTDQQGTVNSQEEK 347

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449432205|ref|XP_004133890.1| PREDICTED: UDP-galactose/UDP-glucose transporter 4-like [Cucumis sativus]

 Score =  585 bits (1508), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 297/353 (84%), Positives = 320/353 (90%), Gaps = 10/353 (2%)

Query: 3   KNEEQTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQ 62
           KN+EQ R+LFGISLTDRPKW QFLICSSGFFFGYLVNG+CEEYVYN+LQFSYGWYFTFIQ
Sbjct: 2   KNDEQVRTLFGISLTDRPKWHQFLICSSGFFFGYLVNGICEEYVYNKLQFSYGWYFTFIQ 61

Query: 63  GFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVL 122
           GFVYL LIYLQGFT KQM+NPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVL
Sbjct: 62  GFVYLFLIYLQGFTAKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVL 121

Query: 123 PVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMD 182
           PVM+MGAFIPGLRRKYP HEY+SA+LLVVGLI+FTLADAQTSPNFS++GV+MISGALIMD
Sbjct: 122 PVMIMGAFIPGLRRKYPPHEYISAVLLVVGLIIFTLADAQTSPNFSILGVVMISGALIMD 181

Query: 183 SFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGV 242
           SFLGNLQEAIFTMNPETTQMEMLFCSTVVGLP LIPPMLLTGELFKAW SCSQH YVYGV
Sbjct: 182 SFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPFLIPPMLLTGELFKAWTSCSQHKYVYGV 241

Query: 243 LVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLL 302
           LVFEAMAT+IGQVSVLSLIALFGAATTAM+TTARKAVTLLLSYLIFTKPL+EQH TGLLL
Sbjct: 242 LVFEAMATYIGQVSVLSLIALFGAATTAMITTARKAVTLLLSYLIFTKPLSEQHATGLLL 301

Query: 303 IAMGITLKLLPADDKPIKRTATSSFKVN--------IRKLSFSEREEADEEKR 347
           I MGITLKLLP D KP K  A+S+ + +          +++     E DEE+R
Sbjct: 302 IGMGITLKLLP-DYKP-KNKASSNVRTSKPPANNGKDNEMAHQIEIEKDEERR 352

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147845004|emb|CAN80578.1| hypothetical protein VITISV_031735 [Vitis vinifera]

 Score =  583 bits (1504), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 295/345 (85%), Positives = 312/345 (90%), Gaps = 6/345 (1%)

Query: 3   KNEEQTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQ 62
           KNEEQ RSLFGISL+DRPKWQQFLICSSGFFFGYLVNG+CEEYVYNRLQFSYGWYFTF+Q
Sbjct: 2   KNEEQARSLFGISLSDRPKWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQ 61

Query: 63  GFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVL 122
           GFVYLVLIY QGFTTKQM+NPWKTYVKLSAVLMGSHGLTKGSLAFLNYPA     S  VL
Sbjct: 62  GFVYLVLIYFQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPA-----SAHVL 116

Query: 123 PVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMD 182
           PVMVMGAFIPGLRRKYPAHEYVSA+LLVVGLILFTLADA TSPNFS+IGV+M+SGAL+MD
Sbjct: 117 PVMVMGAFIPGLRRKYPAHEYVSAVLLVVGLILFTLADAHTSPNFSVIGVLMVSGALVMD 176

Query: 183 SFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGV 242
           SFLGNLQEAIFT+NP+TTQMEMLFCSTV+GLP LIPPML TGELFKAWNSCSQHLYVYGV
Sbjct: 177 SFLGNLQEAIFTLNPDTTQMEMLFCSTVIGLPFLIPPMLFTGELFKAWNSCSQHLYVYGV 236

Query: 243 LVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLL 302
           LVFEAMATFIGQVSVLSLIA+FGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHG+GLLL
Sbjct: 237 LVFEAMATFIGQVSVLSLIAIFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGSGLLL 296

Query: 303 IAMGITLKLLPADDKPIKRTATSSFKVNIRKLSFSEREEADEEKR 347
           IAMGI LKLLP D+KP K+ +  S         F   EE  EE R
Sbjct: 297 IAMGIVLKLLP-DNKPYKKASLESPTTEKTANPFPREEEKSEEMR 340

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532052|ref|XP_003534588.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 2-like isoform 2 [Glycine max]

 Score =  583 bits (1502), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 300/370 (81%), Positives = 322/370 (87%), Gaps = 23/370 (6%)

Query: 3   KNEEQTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQ 62
           KNEEQ RSLFGISL+DRP+WQQFLICSSGFFFGYLVNG+CEEYVYNRL FSYGWYFTF+Q
Sbjct: 2   KNEEQARSLFGISLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLHFSYGWYFTFVQ 61

Query: 63  GFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVL 122
           GFVYL LIYLQGFT+KQM+NPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQ+MFKSTKVL
Sbjct: 62  GFVYLCLIYLQGFTSKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVL 121

Query: 123 PVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMD 182
           PVM+MGAFIPGLRRKYP HEY+SA+LLVVGLILFTLADAQTSPNFSMIGVIMISGAL+MD
Sbjct: 122 PVMIMGAFIPGLRRKYPLHEYISAILLVVGLILFTLADAQTSPNFSMIGVIMISGALVMD 181

Query: 183 SFLGNLQEAIFTMNPET-------------TQMEMLFCSTVVGLPMLIPPMLLTGELFKA 229
           SFLGNLQEAIFTMNPET             TQMEMLFCSTVVGLP LIPPML TGELFKA
Sbjct: 182 SFLGNLQEAIFTMNPETTQPYKISNTFSLLTQMEMLFCSTVVGLPFLIPPMLFTGELFKA 241

Query: 230 WNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFT 289
           W SCSQH YVYGVLVFEAMATFIGQVSVLSLIA+FGAATTAM+TTARKAVTLLLSYLIFT
Sbjct: 242 WTSCSQHPYVYGVLVFEAMATFIGQVSVLSLIAIFGAATTAMITTARKAVTLLLSYLIFT 301

Query: 290 KPLTEQHGTGLLLIAMGITLKLLPADDK----PIKRTATSSFKVNIRKLSFSER-----E 340
           KPLTEQHG+GLLLIAMGITLK+LP D+K      KR  TSS + N  K +  E       
Sbjct: 302 KPLTEQHGSGLLLIAMGITLKMLP-DNKFTSTKTKRVLTSSARDNGAKSTSDEELGTLPN 360

Query: 341 EADEEKRAPV 350
             + ++R P+
Sbjct: 361 SGENDERRPL 370

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225426765|ref|XP_002282676.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 2 [Vitis vinifera] gi|297742604|emb|CBI34753.3| unnamed protein product [Vitis vinifera]

 Score =  581 bits (1498), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 295/347 (85%), Positives = 315/347 (90%), Gaps = 4/347 (1%)

Query: 3   KNEEQTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQ 62
           K EEQ RSLFGISL+DRPKWQQFLICSSGFFFGYL+NG+CEEYVYNRL+FSYGWYFTFIQ
Sbjct: 2   KGEEQARSLFGISLSDRPKWQQFLICSSGFFFGYLINGICEEYVYNRLKFSYGWYFTFIQ 61

Query: 63  GFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVL 122
           GFVYL LIYLQGFTTKQM NPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVL
Sbjct: 62  GFVYLALIYLQGFTTKQMSNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVL 121

Query: 123 PVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMD 182
           PVM+MGAFIPGLRRKYP HEYVSA+LLVVGLILFTLADAQTSPNFS IGV+MISGAL+MD
Sbjct: 122 PVMIMGAFIPGLRRKYPFHEYVSAVLLVVGLILFTLADAQTSPNFSSIGVLMISGALVMD 181

Query: 183 SFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGV 242
           SFLGNLQEAIFTMNPETTQMEMLFCSTVVG P L+ PM+LTGELFKAWNSC QH YVYGV
Sbjct: 182 SFLGNLQEAIFTMNPETTQMEMLFCSTVVGFPFLLVPMILTGELFKAWNSCLQHPYVYGV 241

Query: 243 LVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLL 302
           LVFEAMATF+GQVSVLSLIA+FGAATTAM+TTARKAVTLLLSY+IFTKPLTEQHGTGLLL
Sbjct: 242 LVFEAMATFVGQVSVLSLIAMFGAATTAMITTARKAVTLLLSYMIFTKPLTEQHGTGLLL 301

Query: 303 IAMGITLKLLP---ADDKPIKRTATSSFKVNIRKLSFSEREEADEEK 346
           IAMGI LK+LP   A  +P   TA  S K   R L    R+E +E++
Sbjct: 302 IAMGIILKMLPDTQAPKRPTSSTAKPSSKGE-RALVEKMRDEGEEKQ 347

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224074825|ref|XP_002304463.1| predicted protein [Populus trichocarpa] gi|222841895|gb|EEE79442.1| predicted protein [Populus trichocarpa]

 Score =  581 bits (1498), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 285/348 (81%), Positives = 318/348 (91%), Gaps = 3/348 (0%)

Query: 3   KNEEQTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQ 62
           K E+QTR LFGISL+DRPKWQQFLICSSGFFFGYL+NG+CEEYVYNRLQFSYGWYFTF+Q
Sbjct: 2   KGEDQTRYLFGISLSDRPKWQQFLICSSGFFFGYLINGICEEYVYNRLQFSYGWYFTFVQ 61

Query: 63  GFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVL 122
           GFVYLVLIYLQGFT KQM+NPWKTY KLSAVLMGSHGLTKGSLAFLNYPAQ+MFKSTKVL
Sbjct: 62  GFVYLVLIYLQGFTPKQMVNPWKTYWKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVL 121

Query: 123 PVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMD 182
           PVM+MGAFIPGLRRKYP HEY+SALLLV+GLILFTLADAQTSPNFS+IGV+MISGALIMD
Sbjct: 122 PVMLMGAFIPGLRRKYPVHEYISALLLVIGLILFTLADAQTSPNFSIIGVLMISGALIMD 181

Query: 183 SFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGV 242
           S +GNLQEAIFTMNP+TTQ+E+LFCST+VGLP L+PPM+LTGELFKAW SC+QH YVYGV
Sbjct: 182 SLMGNLQEAIFTMNPDTTQIEVLFCSTIVGLPFLLPPMILTGELFKAWKSCAQHPYVYGV 241

Query: 243 LVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLL 302
           LVFEAMATF+GQ+SVLSLIA+FGAA TAM+TTARKAVTLLLSY+IFTKPLTEQHGTGLLL
Sbjct: 242 LVFEAMATFVGQISVLSLIAIFGAAATAMITTARKAVTLLLSYMIFTKPLTEQHGTGLLL 301

Query: 303 IAMGITLKLLPADDKPIKRTATSSFKVNIRK---LSFSEREEADEEKR 347
           +AMGI LK++P D KP  R+A    K + ++   L  S + E  EEKR
Sbjct: 302 LAMGIILKMVPVDYKPPTRSAARHGKSHFKEEISLGDSRKAEGAEEKR 349

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	350
TAIR|locus:2195032	349	AT1G12600 "AT1G12600" [Arabido	0.977	0.979	0.770	1.9e-140
ZFIN|ZDB-GENE-060312-46	386	slc35b3 "solute carrier family	0.928	0.841	0.345	2.7e-45
UNIPROTKB|F1P4W7	387	SLC35B3 "Uncharacterized prote	0.911	0.824	0.355	9.1e-45
UNIPROTKB|E2RJI8	369	SLC35B3 "Uncharacterized prote	0.851	0.807	0.354	8.1e-44
UNIPROTKB|F1RV99	369	SLC35B3 "Uncharacterized prote	0.877	0.831	0.347	1.3e-43
RGD|1307183	369	Slc35b3 "solute carrier family	0.851	0.807	0.354	4.5e-43
UNIPROTKB|E1BLS0	430	SLC35B3 "Uncharacterized prote	0.851	0.693	0.344	1.5e-42
UNIPROTKB|Q9H1N7	401	SLC35B3 "Adenosine 3'-phospho	0.851	0.743	0.344	1.5e-42
MGI|MGI:1913978	369	Slc35b3 "solute carrier family	0.851	0.807	0.350	1.9e-42
UNIPROTKB|Q17CE7	382	Papst2 "Adenosine 3'-phospho 5	0.922	0.845	0.321	5.9e-41

TAIR|locus:2195032 AT1G12600 "AT1G12600" [Arabidopsis thaliana (taxid:3702)]

 Score = 1374 (488.7 bits), Expect = 1.9e-140, P = 1.9e-140
 Identities = 265/344 (77%), Positives = 293/344 (85%)

Query:     4 NEEQTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQG 63
             +EEQ   LFGI L+D+P+WQQFLICSSGFFFGYLVNG+CEEYVYNRL+FSYGWYFTF QG
Sbjct:     5 SEEQMIKLFGIPLSDKPRWQQFLICSSGFFFGYLVNGICEEYVYNRLKFSYGWYFTFAQG 64

Query:    64 FVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLP 123
              VY+ LIY+ GF TKQM+NPWKTYVKLS VLMGSHGLTKGSLA+LNYPAQ+MFKSTKVLP
Sbjct:    65 LVYIALIYMYGFRTKQMVNPWKTYVKLSGVLMGSHGLTKGSLAYLNYPAQIMFKSTKVLP 124

Query:   124 VMVMGAFIPGLRRKYPAHEYXXXXXXXXXXXXXXXADAQTSPNFSMIGVIMISGALIMDS 183
             VMVMGAFIPGLRRKYP HEY               ADA TSPNFS+IGV+MISGALIMD+
Sbjct:   125 VMVMGAFIPGLRRKYPVHEYISAMLLVIGLILFTLADAHTSPNFSIIGVMMISGALIMDA 184

Query:   184 FLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVL 243
             FLGNLQEAIFTMNPETTQMEMLFCSTVVGLP L+ PM+LTGELF AWNSC+QH YVYGVL
Sbjct:   185 FLGNLQEAIFTMNPETTQMEMLFCSTVVGLPFLLAPMILTGELFTAWNSCAQHPYVYGVL 244

Query:   244 VFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLI 303
             VFEAMATFIGQVSVLSLIALFGAATTAM+TTARKAVTLLLSYLIFTKPLTEQHGTGLLLI
Sbjct:   245 VFEAMATFIGQVSVLSLIALFGAATTAMITTARKAVTLLLSYLIFTKPLTEQHGTGLLLI 304

Query:   304 AMGITLKLLPADDKPIKRTATSSFKVNIRKLSFSEREEADEEKR 347
              MGI LK++P  +   K + +      + ++ F E+E+ DEE R
Sbjct:   305 FMGIILKMVPDPNPNPKSSGSGQTPGKLERVKF-EKED-DEESR 346

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0055085 "transmembrane transport" evidence=IEA

ZFIN|ZDB-GENE-060312-46 slc35b3 "solute carrier family 35, member B3" [Danio rerio (taxid:7955)]

 Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
 Identities = 115/333 (34%), Positives = 183/333 (54%)

Query:     3 KNEEQTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFS-YGWYFTFI 61
             K+ E+ R L GI+L       QF IC +G F  YL+ G  +E +++   F  +GWY T +
Sbjct:    45 KSVEELRVL-GINLNSFNTPTQFFICVAGVFLFYLIYGYLQELIFSVEGFKPFGWYLTLV 103

Query:    62 Q-GFVYLV-LIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKST 119
             Q GF  L  L+ LQ    K+   P KTY+ ++ + +G+ GL+  SL +LNYP Q++FK  
Sbjct:   104 QFGFYSLFGLVELQLTQDKRRRIPCKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCC 163

Query:   120 KVLPVMVMGAFIPGLRRKYPAHEYXXXXXXXXXXXXXXXADAQTSPNFSMIGVIMISGAL 179
             K++PVM+ G FI G  ++Y   +                AD++ +PNF++ GV++IS AL
Sbjct:   164 KLIPVMIGGVFIQG--KRYNVADVSAALCMSLGLIWFTLADSKIAPNFNVTGVLLISLAL 221

Query:   180 IMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQH-LY 238
               D+ +GN+QE    ++   +  EM+  S  +G   ++  +L  G L  A + C+QH + 
Sbjct:   222 CADAAIGNVQEKAMKLH-NGSNSEMVLYSYSIGFVYILLGLLSLGGLGPAVSFCAQHPMT 280

Query:   239 VYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGT 298
              YG     ++  + G   VL+LI LFGA     VTT RKA+T++LS+L F+KP T Q+  
Sbjct:   281 TYGYAFLFSLTGYFGISFVLALIKLFGALVAVTVTTGRKAMTIVLSFLFFSKPFTFQYVW 340

Query:   299 GLLLIAMGITLKLLPADDKPIKRTATSSFKVNI 331
             G LL+  GI L +   +   +K  + +  +  +
Sbjct:   341 GGLLVVFGIFLNVYSKNKDKMKLPSLAELRKRV 373

GO:0055085 "transmembrane transport" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1P4W7 SLC35B3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
 Identities = 117/329 (35%), Positives = 179/329 (54%)

Query:    11 LFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFS-YGWYFTFIQ-GFVYLV 68
             + GI+L+   K  QF IC SG F  YL+ G  +E +++   F  +GWY T +Q GF Y V
Sbjct:    53 VLGINLSKFNKPAQFFICVSGVFMFYLIYGYLQELIFSVEGFKPFGWYLTLVQFGF-YSV 111

Query:    69 --LIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMV 126
               LI LQ    K+   P KTY+ ++ + +G+ GL+  SL +LNYP Q++FK  K++PVMV
Sbjct:   112 FGLIELQLIQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMV 171

Query:   127 MGAFIPGLRRKYPAHEYXXXXXXXXXXXXXXXADAQTSPNFSMIGVIMISGALIMDSFLG 186
              G FI G  ++Y   +                AD+  +PNF++ GV++IS AL  D+ +G
Sbjct:   172 GGVFIQG--KRYNIADVSAALCMSLGLIWFTLADSTVAPNFNLTGVVLISLALCADAVIG 229

Query:   187 NLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQH-LYVYGVLVF 245
             N+QE    ++   +  EM+  S  +G   ++  +  T  L  A   CSQH +  YG    
Sbjct:   230 NVQEKAMKLH-NGSNSEMVLYSYSIGFLYILLGLTCTSGLSPAVAFCSQHPIQTYGYAFL 288

Query:   246 EAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAM 305
              ++  + G   VL+LI +FGA     VTT RKA+T++LS+L F KP T Q+    LL+ +
Sbjct:   289 FSLTGYFGISFVLALIKIFGALLAVTVTTGRKAMTIVLSFLFFAKPFTFQYVWSGLLVVL 348

Query:   306 GITLKLLPADDKPIKRTATSS-FKVNIRK 333
             GI L +   +   IK  +    +K N+ +
Sbjct:   349 GIFLNVYSKNMDKIKLPSLHGIWKKNVEE 377

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|E2RJI8 SLC35B3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
 Identities = 108/305 (35%), Positives = 169/305 (55%)

Query:    11 LFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQF-SYGWYFTFIQGFVYLV- 68
             + GI+L+   K  QF IC +G F  YL+ G  +E +++   F SYGWY T +Q   Y + 
Sbjct:    35 VLGINLSRFNKLTQFFICVAGVFVFYLIYGYLQELIFSMEGFKSYGWYLTLVQFAFYSIF 94

Query:    69 -LIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVM 127
              LI LQ    K+   P KTY+ ++ + +G+ GL+  SL +LNYP Q++FK  K++PVM+ 
Sbjct:    95 GLIELQLIQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMLG 154

Query:   128 GAFIPGLRRKYPAHEYXXXXXXXXXXXXXXXADAQTSPNFSMIGVIMISGALIMDSFLGN 187
             G FI G  ++Y   +                AD+  +PNF++ GVI+IS AL  D+ +GN
Sbjct:   155 GVFIQG--KRYNIADVSAAVCMSLGLIWFTLADSTIAPNFNLTGVILISLALCADAVIGN 212

Query:   188 LQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQH-LYVYGVLVFE 246
             +QE    ++   +  EM+  S  +G   ++  +  T  L  A   CS++ +  YG     
Sbjct:   213 VQEKAMKLH-NASNSEMVLYSYSIGFVYILLGLTCTSGLGPAVTFCSKNPIQTYGYAFLF 271

Query:   247 AMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMG 306
             ++  + G   VL+LI +FGA     VTT RKA+T++LS++ F KP T Q+    LL+ +G
Sbjct:   272 SLTGYFGISFVLALIKIFGALLAVTVTTGRKAMTIVLSFMFFAKPFTFQYVWSGLLVVLG 331

Query:   307 ITLKL 311
             I L +
Sbjct:   332 IFLNV 336

GO:0005739 "mitochondrion" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

UNIPROTKB|F1RV99 SLC35B3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
 Identities = 109/314 (34%), Positives = 171/314 (54%)

Query:    11 LFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFS-YGWYFTFIQGFVYLV- 68
             + GI+L+   K  QF IC +G F  YL+ G  +E +++   F  YGWY T +Q   Y + 
Sbjct:    35 VLGINLSRFNKLTQFFICVAGVFVFYLIYGYLQELIFSMEGFKPYGWYLTLVQFAFYSIF 94

Query:    69 -LIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVM 127
              LI LQ    K+   P KTY+ ++ + +G+ GL+  SL +LNYP Q++FK  K++PVM+ 
Sbjct:    95 GLIELQLIQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMLG 154

Query:   128 GAFIPGLRRKYPAHEYXXXXXXXXXXXXXXXADAQTSPNFSMIGVIMISGALIMDSFLGN 187
             G FI G  ++Y   +                AD+  +PNF++ GVI+IS AL  D+ +GN
Sbjct:   155 GVFIQG--KRYNVADVSAALCMSLGLIWFTLADSTVAPNFNLTGVILISLALCADAVIGN 212

Query:   188 LQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQH-LYVYGVLVFE 246
             +QE    ++   +  EM+  S  +G   ++  +  T  L  A   CS++ +  YG     
Sbjct:   213 VQEKAMKLH-NASNSEMVLYSYSIGFVYILLGLTCTSGLGPAVTFCSKNPVRTYGYAFLF 271

Query:   247 AMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMG 306
             ++  + G   VL+LI +FGA     VTT RKA+T++LS++ F KP T Q+    LL+ +G
Sbjct:   272 SLTGYFGISFVLALIKIFGALLAVTVTTGRKAMTIVLSFIFFAKPFTFQYVWSGLLVVLG 331

Query:   307 ITLKLLPADDKPIK 320
             I L +   +   IK
Sbjct:   332 IFLNVYSKNMDKIK 345

GO:0005739 "mitochondrion" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

RGD|1307183 Slc35b3 "solute carrier family 35, member B3" [Rattus norvegicus (taxid:10116)]

 Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
 Identities = 108/305 (35%), Positives = 169/305 (55%)

Query:    11 LFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFS-YGWYFTFIQGFVYLV- 68
             + G++L+   K  QFLIC +G F  YL+ G  +E +++   F  YGWY T +Q   Y V 
Sbjct:    35 VLGVNLSRFKKLTQFLICVAGVFVFYLIYGYLQELIFSMEGFKPYGWYLTLVQFAFYSVF 94

Query:    69 -LIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVM 127
              LI LQ    K+   P KTY+ ++ + +G+ GL+  SL +LNYP Q++FK  K++PVM+ 
Sbjct:    95 GLIELQLTQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMLG 154

Query:   128 GAFIPGLRRKYPAHEYXXXXXXXXXXXXXXXADAQTSPNFSMIGVIMISGALIMDSFLGN 187
             G FI G  ++Y   +                AD+  +PNF++ GV++IS AL  D+ +GN
Sbjct:   155 GVFIQG--KRYNLADVSAAVCMSLGLIWFTLADSTIAPNFNLTGVMLISLALCADAVIGN 212

Query:   188 LQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQH-LYVYGVLVFE 246
             +QE    ++   +  EM+  S  +G   ++  +  T  L  A   CS++ +  YG     
Sbjct:   213 VQEKAMKLH-NASNSEMVLYSYSIGFVYILLGLSCTSGLGPALAFCSKNPVRTYGYAFLF 271

Query:   247 AMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMG 306
             ++  + G   VL+LI +FGA     VTT RKA+T++LS+L F KP T Q+    LL+ +G
Sbjct:   272 SLTGYFGISFVLALIKIFGALLAVTVTTGRKAMTIVLSFLFFAKPFTFQYIWSGLLVVLG 331

Query:   307 ITLKL 311
             I L +
Sbjct:   332 IFLNV 336

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

UNIPROTKB|E1BLS0 SLC35B3 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
 Identities = 105/305 (34%), Positives = 166/305 (54%)

Query:    11 LFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFS-YGWYFTFIQGFVYLV- 68
             + GI+L+   K  QF IC +G F  YL+ G  +E +++   F  YGWY T +Q   Y + 
Sbjct:    96 VLGINLSRFNKLTQFFICVAGVFVFYLIYGYLQELIFSVEGFKPYGWYLTLVQFAFYSIF 155

Query:    69 -LIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVM 127
              LI LQ    K+   P KTY+ ++ + +G+ GL+  SL +LNYP Q++FK  K++PVM+ 
Sbjct:   156 GLIELQLIQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMLG 215

Query:   128 GAFIPGLRRKYPAHEYXXXXXXXXXXXXXXXADAQTSPNFSMIGVIMISGALIMDSFLGN 187
             G FI G  ++Y   +                AD+  +PNF++ GV++IS AL  D+ +GN
Sbjct:   216 GVFIQG--KRYNVADVSAALCMSLGLIWFTLADSTVAPNFNLTGVVLISLALCADAVIGN 273

Query:   188 LQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQH-LYVYGVLVFE 246
             +QE    ++   +  EM+  S  +G   ++  +  T  L  A   CS+  +  YG     
Sbjct:   274 VQEKAMKLH-NASNSEMVLYSYSIGFVYILLGLTCTSGLGPAVTFCSKDPIRTYGYAFLF 332

Query:   247 AMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMG 306
             ++  + G   VL+LI +FGA     VTT RKA+T++LS++ F KP T Q+     L+ +G
Sbjct:   333 SLTGYFGISFVLALIKIFGALLAVTVTTGRKAMTIVLSFIFFAKPFTFQYVWSGFLVVLG 392

Query:   307 ITLKL 311
             I L +
Sbjct:   393 IFLNV 397

GO:0005739 "mitochondrion" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

UNIPROTKB|Q9H1N7 SLC35B3 "Adenosine 3'-phospho 5'-phosphosulfate transporter 2" [Homo sapiens (taxid:9606)]

 Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
 Identities = 105/305 (34%), Positives = 169/305 (55%)

Query:    11 LFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQF-SYGWYFTFIQGFVYLV- 68
             + G++L+   K  QF IC +G F  YL+ G  +E +++   F S GWY T +Q   Y + 
Sbjct:    67 VLGMNLSKFNKLTQFFICVAGVFVFYLIYGYLQELIFSVEGFKSCGWYLTLVQFAFYSIF 126

Query:    69 -LIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVM 127
              LI LQ    K+   P KTY+ ++ + +G+ GL+  SL +LNYP Q++FK  K++PVM+ 
Sbjct:   127 GLIELQLIQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMLG 186

Query:   128 GAFIPGLRRKYPAHEYXXXXXXXXXXXXXXXADAQTSPNFSMIGVIMISGALIMDSFLGN 187
             G FI G  ++Y   +                AD+ T+PNF++ GV++IS AL  D+ +GN
Sbjct:   187 GVFIQG--KRYNVADVSAAICMSLGLIWFTLADSTTAPNFNLTGVVLISLALCADAVIGN 244

Query:   188 LQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQH-LYVYGVLVFE 246
             +QE    ++   +  EM+  S  +G   ++  +  T  L  A   C+++ +  YG     
Sbjct:   245 VQEKAMKLH-NASNSEMVLYSYSIGFVYILLGLTCTSGLGPAVTFCAKNPVRTYGYAFLF 303

Query:   247 AMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMG 306
             ++  + G   VL+LI +FGA     VTT RKA+T++LS++ F KP T Q+    LL+ +G
Sbjct:   304 SLTGYFGISFVLALIKIFGALIAVTVTTGRKAMTIVLSFIFFAKPFTFQYVWSGLLVVLG 363

Query:   307 ITLKL 311
             I L +
Sbjct:   364 IFLNV 368

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

MGI|MGI:1913978 Slc35b3 "solute carrier family 35, member B3" [Mus musculus (taxid:10090)]

 Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
 Identities = 107/305 (35%), Positives = 169/305 (55%)

Query:    11 LFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFS-YGWYFTFIQGFVYLV- 68
             + G++L+   K  QFLIC +G F  YL+ G  +E +++   F  YGWY T +Q   Y V 
Sbjct:    35 VLGVNLSKFSKLTQFLICVAGVFVFYLIYGYLQELIFSVEGFKPYGWYLTLVQFAFYSVF 94

Query:    69 -LIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVM 127
              LI LQ    ++   P KTY+ ++ + +G+ GL+  SL +LNYP Q++FK  K++PVM+ 
Sbjct:    95 GLIELQLTQDRRRRIPGKTYMLIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMLG 154

Query:   128 GAFIPGLRRKYPAHEYXXXXXXXXXXXXXXXADAQTSPNFSMIGVIMISGALIMDSFLGN 187
             G FI G  ++Y   +                AD+  +PNF++ GV++IS AL  D+ +GN
Sbjct:   155 GVFIQG--KRYNLADVSAAVCMSLGLIWFTLADSTIAPNFNLTGVMLISLALCADAVIGN 212

Query:   188 LQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQH-LYVYGVLVFE 246
             +QE    ++   +  EM+  S  +G   ++  +  T  L  A   CS++ +  YG     
Sbjct:   213 VQEKAMKLH-NASNSEMVLYSYSIGFVYILLGLSCTSGLGPAVAFCSKNPVGTYGYAFLF 271

Query:   247 AMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMG 306
             ++  + G   VL+LI +FGA     VTT RKA+T++LS+L F KP T Q+    LL+ +G
Sbjct:   272 SLTGYFGISFVLALIKIFGALLAVTVTTGRKAMTVVLSFLFFAKPFTFQYIWSGLLVVLG 331

Query:   307 ITLKL 311
             I L +
Sbjct:   332 IFLNV 336

GO:0005739 "mitochondrion" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

UNIPROTKB|Q17CE7 Papst2 "Adenosine 3'-phospho 5'-phosphosulfate transporter 2" [Aedes aegypti (taxid:7159)]

 Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
 Identities = 108/336 (32%), Positives = 180/336 (53%)

Query:     2 NKNEEQTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFS-YGWYFTF 60
             +++ ++ + LF   LT      +FL+C +G F  YL+ G  +E ++    F  YGW+ T 
Sbjct:    32 DEDRKEVKILF-FDLTYYNTTTKFLLCCAGVFVLYLLYGYMQELIFTLDGFKPYGWFLTL 90

Query:    61 IQGFVYLVLIYLQ-GFTTKQMMN--PWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFK 117
             +Q   Y V  Y++    +K++    P KTYV L+ + +G+ GL+  SL +LNYP Q++FK
Sbjct:    91 VQFAYYTVFGYVERSLESKRVPRCIPMKTYVLLAFLTLGTMGLSNSSLGYLNYPTQVIFK 150

Query:   118 STKVLPVMVMGAFIPGLRRKYPAHEYXXXXXXXXXXXXXXXADAQTSPNFSMIGVIMISG 177
               K++PV++    I G  +K+   ++               AD+Q SPNF+  GV++IS 
Sbjct:   151 CCKLVPVLIGSILIQG--KKHGPLDFLAAIAMCLGLTLFTLADSQVSPNFNPFGVLLISL 208

Query:   178 ALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQH- 236
             AL+ D+ +GN+QE     + +    E++  S  +G   L   MLLTG LF     C ++ 
Sbjct:   209 ALLCDAAIGNVQEKAMREH-KAPNNEVVIYSYGIGFVYLSVIMLLTGNLFSGITFCMKYP 267

Query:   237 LYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQH 296
             +  +G     +++ ++G   VL+L+   GA   A VTTARKAVT+ LS++ F+KP T  +
Sbjct:   268 VETFGYAFLFSLSGYLGIQIVLTLVRTCGAPLAATVTTARKAVTIALSFVFFSKPFTINY 327

Query:   297 GTGLLLIAMGITLKLLPADDK----PIKRTATSSFK 328
                 L++ +GI L +     K     + RTA   ++
Sbjct:   328 LWSGLIVVLGIYLNVYSKRSKLTFADLNRTAERIYR 363

GO:0005794 "Golgi apparatus" evidence=ISS

GO:0046963 "3'-phosphoadenosine 5'-phosphosulfate transport" evidence=ISS

GO:0046964 "3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q29Q28	UTR2_ARATH	No assigned EC number	0.8074	0.98	0.9942	yes	no
Q7Q5D4	S35B3_ANOGA	No assigned EC number	0.3295	0.94	0.8726	yes	no
Q20787	S35B3_CAEEL	No assigned EC number	0.3170	0.9	0.8653	yes	no
Q9LDX3	UTR4_ARATH	No assigned EC number	0.8	0.98	0.9828	no	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	350
pfam08449	303	pfam08449, UAA, UAA transporter family	4e-85
pfam03151	149	pfam03151, TPT, Triose-phosphate Transporter famil	2e-08
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	2e-05

>gnl|CDD|219846 pfam08449, UAA, UAA transporter family

 Score =  259 bits (663), Expect = 4e-85
 Identities = 111/301 (36%), Positives = 165/301 (54%), Gaps = 15/301 (4%)

Query: 25  FLICSSGFFFGYLVNGVCEEYVYNRLQFS-YGWYFTFIQGFVYLVLIYLQGFTT---KQM 80
           FLIC SG F GY  NGV +E +  R   S +G   TF Q     ++  L        K  
Sbjct: 1   FLICISGIFGGYCSNGVLQELIMTREYGSPFGNLLTFAQFLFISLVGLLYLLLFKKLKPR 60

Query: 81  MNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPA 140
             P KTYV + A    S  L   +L +++YP  ++FKS K++PVM++G  I    ++Y +
Sbjct: 61  KIPLKTYVLIVATFFLSSVLNNEALKYISYPTHVIFKSCKLIPVMILGILI--YGKRYSS 118

Query: 141 HEYVSALLLVVGLILFTLADAQTSPNFS------MIGVIMISGALIMDSFLGNLQEAIFT 194
            +Y+SALL+ +G+I+FTLA A+ S N         +G+ ++ GAL+MD+  GN QE ++ 
Sbjct: 119 LQYLSALLITLGVIIFTLASAKDSKNSKLTTFSDNVGIALLFGALLMDALTGNTQEKLYK 178

Query: 195 MNPETTQMEMLFCSTVVGLPMLIPPMLLTGE--LFKAWNSCSQHLYVYGVLVFEAMATFI 252
              + +  EM+F S ++ LP  +  +L      LF A + C +H  V   L+  ++  ++
Sbjct: 179 KYGKHS-KEMMFYSHLLSLPFFLLGLLDIRTGLLFSAESFCLRHPSVLFYLLLNSLTQYV 237

Query: 253 GQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLL 312
           GQ  V  LI+ FGA T  +VTT RK V+LLLS L+F  PLT Q   G LL+ +GI L   
Sbjct: 238 GQFFVFYLISEFGALTVTLVTTLRKFVSLLLSVLLFGNPLTLQQWLGTLLVFLGIFLYAY 297

Query: 313 P 313
            
Sbjct: 298 L 298

This family includes transporters with a specificity for UDP-N-acetylglucosamine. Length = 303

>gnl|CDD|217390 pfam03151, TPT, Triose-phosphate Transporter family

 Score = 52.6 bits (127), Expect = 2e-08
 Identities = 28/146 (19%), Positives = 61/146 (41%), Gaps = 7/146 (4%)

Query: 171 GVIMISGALIMDSFLGNLQEAIFTMNPETTQ--MEMLFCSTVVGLPMLIPPMLLTGELFK 228
           G I+   A  + +    L + +      T    +E+L+  + V   +L+P +L +     
Sbjct: 1   GFILALAASALFALRLILSQKLLKKKKGTKLNVLELLYYLSPVAFIVLLPGLLFSEGFKL 60

Query: 229 AWNSCS-----QHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLL 283
                      +      +L+   +  F+  +S   L+      T+++  T ++ V ++L
Sbjct: 61  GKFILKFFGDLKTSRYVLLLLLSGVLAFLYNLSAFGLLGRTSPLTSSVAGTVKRVVVIVL 120

Query: 284 SYLIFTKPLTEQHGTGLLLIAMGITL 309
           S +IF  P+T  +  GL +  +G+ L
Sbjct: 121 SVIIFGDPVTFLNILGLAIAILGVVL 146

This family includes transporters with a specificity for triose phosphate. Length = 149

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 45.2 bits (107), Expect = 2e-05
 Identities = 44/258 (17%), Positives = 94/258 (36%), Gaps = 10/258 (3%)

Query: 52  FSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYP 111
                    I   + L L+ L+    +  + PW   + L+ + +    L    LA     
Sbjct: 37  LFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFLLLF-LALKYTS 95

Query: 112 AQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIG 171
           A +      +LP+      +  L  +  +   +  +LL +  +L  L         S++G
Sbjct: 96  ASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLG 155

Query: 172 VIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWN 231
           +++   A ++ +    L + +  + P T     L    ++ L +L+   L          
Sbjct: 156 LLLALAAALLWALYTALVKRLSRLGPVTL---ALLLQLLLALLLLLLFFLSGFGAPILSR 212

Query: 232 SCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKP 291
           +    LY+         +T +  +     + L GA+  A+++        LL  L+  +P
Sbjct: 213 AWLLLLYLG------VFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEP 266

Query: 292 LTEQHGTGLLLIAMGITL 309
           L+     G  L+ +G+ L
Sbjct: 267 LSPAQLLGAALVVLGVLL 284

Length = 292

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	350
KOG1582	367	consensus UDP-galactose transporter related protei	100.0
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	100.0
KOG1581	327	consensus UDP-galactose transporter related protei	100.0
KOG1580	337	consensus UDP-galactose transporter related protei	100.0
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	100.0
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	100.0
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	100.0
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.98
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.97
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.96
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.95
PLN00411	358	nodulin MtN21 family protein; Provisional	99.94
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.91
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.91
PRK11689	295	aromatic amino acid exporter; Provisional	99.9
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.9
PRK11272	292	putative DMT superfamily transporter inner membran	99.89
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.89
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.88
PRK15430	296	putative chloramphenical resistance permease RarD;	99.86
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.82
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.81
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.79
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.77
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.72
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.72
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	99.7
KOG2766	336	consensus Predicted membrane protein [Function unk	99.66
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.66
KOG2765	416	consensus Predicted membrane protein [Function unk	99.65
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.61
COG2962	293	RarD Predicted permeases [General function predict	99.52
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.42
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.37
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	98.97
COG2510	140	Predicted membrane protein [Function unknown]	98.9
PRK15430	296	putative chloramphenical resistance permease RarD;	98.78
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.7
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	98.64
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	98.61
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.6
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.58
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.56
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.55
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.44
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.36
COG2962	293	RarD Predicted permeases [General function predict	98.18
PLN00411	358	nodulin MtN21 family protein; Provisional	98.11
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.09
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.96
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	97.92
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	97.9
PRK11272	292	putative DMT superfamily transporter inner membran	97.85
COG2510	140	Predicted membrane protein [Function unknown]	97.83
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.81
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	97.8
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.78
KOG2922	335	consensus Uncharacterized conserved protein [Funct	97.74
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	97.73
PRK11689	295	aromatic amino acid exporter; Provisional	97.71
PRK10532	293	threonine and homoserine efflux system; Provisiona	97.57
COG0697	292	RhaT Permeases of the drug/metabolite transporter	97.46
PRK13499	345	rhamnose-proton symporter; Provisional	97.46
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.45
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.41
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.4
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.38
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.26
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.25
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.24
COG2076	106	EmrE Membrane transporters of cations and cationic	97.21
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.09
PRK11431	105	multidrug efflux system protein; Provisional	97.06
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.97
PRK11431	105	multidrug efflux system protein; Provisional	96.93
PRK13499	345	rhamnose-proton symporter; Provisional	96.91
PRK09541	110	emrE multidrug efflux protein; Reviewed	96.88
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	96.86
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.83
COG2076	106	EmrE Membrane transporters of cations and cationic	96.83
KOG2765	416	consensus Predicted membrane protein [Function unk	96.71
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	96.59
KOG4510	346	consensus Permease of the drug/metabolite transpor	96.34
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	95.92
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	95.9
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	95.84
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	95.35
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	95.25
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	95.2
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	95.19
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	94.88
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	94.84
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	94.81
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	94.45
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	92.83
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	91.43
KOG1580	337	consensus UDP-galactose transporter related protei	90.77
KOG1581	327	consensus UDP-galactose transporter related protei	90.48
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	87.5
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	87.2
KOG3912	372	consensus Predicted integral membrane protein [Gen	85.61
PF05297	381	Herpes_LMP1: Herpesvirus latent membrane protein 1	84.43
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	82.39
PF07168	336	Ureide_permease: Ureide permease; InterPro: IPR009	81.44
KOG4831	125	consensus Unnamed protein [Function unknown]	80.08

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=100.00  E-value=6.6e-55  Score=383.32  Aligned_cols=342  Identities=46%  Similarity=0.792  Sum_probs=307.4

Q ss_pred             Cccccc--ccEEeeecCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccCCCC-hhhHHHHHHHHHHHHHH--HHhcccC
Q 018776            3 KNEEQT--RSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFS-YGWYFTFIQGFVYLVLI--YLQGFTT   77 (350)
Q Consensus         3 ~~~~~~--~~~~~~~~~~~p~~~~l~~~~~gi~~~~~~~~~~~e~i~~~~~f~-~p~~lt~~q~~~~~~~~--~~~~~~~   77 (350)
                      ++|||+  +|++|+++++.|+|+|+++|.+|+++.|+.||++||.|++..+|+ ++|.+|++|++++..+.  .+++++.
T Consensus        20 ~s~e~p~ki~llg~~ls~kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~~   99 (367)
T KOG1582|consen   20 ISEEQPSKIKLLGFNLSDKPKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQT   99 (367)
T ss_pred             ccccCCcceeEEeeccccCchhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEeecc
Confidence            568899  569999999999999999999999999999999999999999996 99999999999986554  4567888


Q ss_pred             CCCCChhHHHHHHHHHHHhhHHHHHhhhhcCchhHHHHHhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHHh
Q 018776           78 KQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFT  157 (350)
Q Consensus        78 ~~~~~~~~~~~~ls~~~~~~~~l~~~al~~~s~~~~~v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~  157 (350)
                      +++..|||.|..++++..+++.++|-|+.|+|+|+++++|+|+.+|||+.+.++  -++||++.++.+..++++|.+++.
T Consensus       100 k~r~iP~rtY~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifI--qGkRY~v~d~~aA~lm~lGli~FT  177 (367)
T KOG1582|consen  100 KRRVIPWRTYVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFI--QGKRYGVHDYIAAMLMSLGLIWFT  177 (367)
T ss_pred             cceecchhHhhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeee--ccccccHHHHHHHHHHHHHHHhhh
Confidence            888999999999999999999999999999999999999999999999999999  579999999999999999999999


Q ss_pred             ccCCCCCCCchHHHHHHHHHHHHHHHhHHHHHHHHHhhCCCCChHhHHHHHHHhHHHHHHHHhhccchHHHHHHHHHhch
Q 018776          158 LADAQTSPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHL  237 (350)
Q Consensus       158 ~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~  237 (350)
                      ..|.+.+++++..|+.++..|.++||+.+..||+.++.++. +..||++|+..++.++++.++..+||+.++|.+...||
T Consensus       178 LADs~~sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~-ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp  256 (367)
T KOG1582|consen  178 LADSQTSPNFNLIGVMMISGALLADAVIGNVQEKAMKMNPA-SSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHP  256 (367)
T ss_pred             hcccccCCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCC-CcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCc
Confidence            99999889999999999999999999999999999998763 56899999999999999888899999999999999999


Q ss_pred             H-HHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhccCCC
Q 018776          238 Y-VYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADD  316 (350)
Q Consensus       238 ~-~~~~l~l~~~~~~l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~~k~~  316 (350)
                      . .+.+.++.+..+++|+.+....++.+||.+++.+++.|+.+++++|+++|.+|+|.++.-|..+++.|+++..+.|+.
T Consensus       257 ~~tyGy~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~n  336 (367)
T KOG1582|consen  257 VRTYGYAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKRN  336 (367)
T ss_pred             HhHHHHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCCC
Confidence            7 677777778889999999999999999999999999999999999999999999999999999999999999998832


Q ss_pred             CccccccccchhhhhhhccccchhhhhhhhcCCC
Q 018776          317 KPIKRTATSSFKVNIRKLSFSEREEADEEKRAPV  350 (350)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  350 (350)
                      +..+..  .+...+.+-. ++.|+++|+|++++|
T Consensus       337 k~~~~~--~~~r~~~~~~-g~~~~~~~r~~~~~V  367 (367)
T KOG1582|consen  337 KIPLAS--LIRRIVARAA-GKVDRSVDRKDPMLV  367 (367)
T ss_pred             CCchhh--HHhhhhhhhc-cccccccccccccCC
Confidence            222111  1222233333 567788889988876

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=100.00  E-value=2.1e-44  Score=338.91  Aligned_cols=291  Identities=33%  Similarity=0.557  Sum_probs=260.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhccCCCC-hhhHHHHHHHHHHHHHHHH--hcc-cCCCCCChhHHHHHHHHHHHhhHHH
Q 018776           25 FLICSSGFFFGYLVNGVCEEYVYNRLQFS-YGWYFTFIQGFVYLVLIYL--QGF-TTKQMMNPWKTYVKLSAVLMGSHGL  100 (350)
Q Consensus        25 l~~~~~gi~~~~~~~~~~~e~i~~~~~f~-~p~~lt~~q~~~~~~~~~~--~~~-~~~~~~~~~~~~~~ls~~~~~~~~l  100 (350)
                      +++|++|+|++|+.++++||+++++.... +|++++++|++++.+....  ... ++++++.|+++|+++++++.++..+
T Consensus         1 ~~~~~~~i~~~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (303)
T PF08449_consen    1 FLICVAGIFGGCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPKSRKIPLKKYAILSFLFFLASVL   80 (303)
T ss_pred             CEeeHHHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccCCCcChHHHHHHHHHHHHHHHHH
Confidence            35799999999999999999999876555 9999999999987765443  222 2456688999999999999999999


Q ss_pred             HHhhhhcCchhHHHHHhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHHhccCCCCCCC------chHHHHHH
Q 018776          101 TKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPN------FSMIGVIM  174 (350)
Q Consensus       101 ~~~al~~~s~~~~~v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~~~~~~~~~------~~~~G~~~  174 (350)
                      +|.|++|+|+|+++++|+++|++||+++.++  +|||++++++++++++++|++++...|.+.+.+      ....|+++
T Consensus        81 ~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~--~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~l  158 (303)
T PF08449_consen   81 SNAALKYISYPTQIVFKSSKPIPVMILGVLI--LGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIIL  158 (303)
T ss_pred             HHHHHHhCChHHHHHHhhhHHHHHHHHHHHh--cCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHH
Confidence            9999999999999999999999999999999  899999999999999999999999887643211      12349999


Q ss_pred             HHHHHHHHHhHHHHHHHHHhhCCCCChHhHHHHHHHhHHHHHHHHhhc--cchHHHHHHHHHhchHHHHHHHHHHHHHHH
Q 018776          175 ISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLL--TGELFKAWNSCSQHLYVYGVLVFEAMATFI  252 (350)
Q Consensus       175 ~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~g~~~~~~~~~~~~~~~~~~l~l~~~~~~l  252 (350)
                      +++|.++||+++++|||++++++ .++.|+++|++++++|+.++..+.  .+|..+..++...+|+.+..+++.++++++
T Consensus       159 l~~sl~~~a~~~~~qe~~~~~~~-~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~  237 (303)
T PF08449_consen  159 LLLSLLLDAFTGVYQEKLFKKYG-KSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGAL  237 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhC-CcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence            99999999999999999999875 468999999999999999887766  788888888888899888888888999999


Q ss_pred             HHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhccCCCCc
Q 018776          253 GQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADDKP  318 (350)
Q Consensus       253 ~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~~k~~~~  318 (350)
                      ++.+++.+++++||++.++++++|+++++++|+++|||++++.||+|+++++.|+.+|.+.|+|+|
T Consensus       238 g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~~  303 (303)
T PF08449_consen  238 GQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKKN  303 (303)
T ss_pred             HHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccCC
Confidence            999999999999999999999999999999999999999999999999999999999999987654

; GO: 0055085 transmembrane transport

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=100.00  E-value=2.4e-44  Score=322.47  Aligned_cols=294  Identities=27%  Similarity=0.456  Sum_probs=267.3

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhhhhcc------CCCChhhHHHHHHHHHHHHHHHH--hccc-CCCCCChhHHHHHH
Q 018776           20 PKWQQFLICSSGFFFGYLVNGVCEEYVYNR------LQFSYGWYFTFIQGFVYLVLIYL--QGFT-TKQMMNPWKTYVKL   90 (350)
Q Consensus        20 p~~~~l~~~~~gi~~~~~~~~~~~e~i~~~------~~f~~p~~lt~~q~~~~~~~~~~--~~~~-~~~~~~~~~~~~~l   90 (350)
                      .+-.++++|+.|||++|++||++||+++++      .+|.++.++.++|.+++.++.+.  ..++ +.+.++||++|..+
T Consensus        10 ~~~~~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~~~~~apl~~y~~i   89 (327)
T KOG1581|consen   10 NKIILLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKWWKKELSGVAPLYKYSLI   89 (327)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhcccccCCCCCchhHHhHH
Confidence            456789999999999999999999999764      47999999999999998776543  3332 24557899999999


Q ss_pred             HHHHHhhHHHHHhhhhcCchhHHHHHhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHHhccCCCCC-----C
Q 018776           91 SAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTS-----P  165 (350)
Q Consensus        91 s~~~~~~~~l~~~al~~~s~~~~~v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~~~~~~~-----~  165 (350)
                      |+.+..+..++++||+|+|+|++++.|+|+.+|||+++.++  .|+|++..++++.+++.+||.++...+.+++     .
T Consensus        90 s~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lv--y~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~  167 (327)
T KOG1581|consen   90 SFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLV--YGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGR  167 (327)
T ss_pred             HHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHH--hcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCC
Confidence            99999999999999999999999999999999999999999  8999999999999999999999988754331     2


Q ss_pred             CchHHHHHHHHHHHHHHHhHHHHHHHHHhhCCCCChHhHHHHHHHhHHHHHHHHhhccchHHHHHHHHHhchHHHHHHHH
Q 018776          166 NFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVF  245 (350)
Q Consensus       166 ~~~~~G~~~~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~l~l  245 (350)
                      ++++.|+.++..+.++||+.+..|+++.+++ +.+++++|++.|+++++.....++..|.+.++.++...||+.+..+++
T Consensus       168 ~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~-k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l  246 (327)
T KOG1581|consen  168 ENSPIGILLLFGYLLFDGFTNATQDSLFKKY-KVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILL  246 (327)
T ss_pred             CCchHhHHHHHHHHHHHhhHHhHHHHHhccC-CccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHH
Confidence            4789999999999999999999999999965 478999999999999998888778888888899999999999888888


Q ss_pred             HHHHHHHHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhccCCC
Q 018776          246 EAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADD  316 (350)
Q Consensus       246 ~~~~~~l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~~k~~  316 (350)
                      .+.|+++||.++|+.++++||++.+++++.|+++++++|.+.|||+++..||+|+.++++|+.+-.+.|.|
T Consensus       247 ~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~  317 (327)
T KOG1581|consen  247 YSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK  317 (327)
T ss_pred             HHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence            89999999999999999999999999999999999999999999999999999999999999999988766

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=100.00  E-value=4.6e-45  Score=315.35  Aligned_cols=296  Identities=27%  Similarity=0.451  Sum_probs=262.7

Q ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcc---------CCCChhhHHHHHHHHHHHHHHHH-hcccC--CCCCChh
Q 018776           17 TDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNR---------LQFSYGWYFTFIQGFVYLVLIYL-QGFTT--KQMMNPW   84 (350)
Q Consensus        17 ~~~p~~~~l~~~~~gi~~~~~~~~~~~e~i~~~---------~~f~~p~~lt~~q~~~~~~~~~~-~~~~~--~~~~~~~   84 (350)
                      +-.|...|+++|+.||++||..||+.||+|.+.         ++|++.+.+.++|+.++.++.-+ ...++  +..+.|-
T Consensus         6 s~lper~rf~ica~GifvCYF~yGI~QEkitrGkYg~~g~~~E~FTfalaLVf~qC~~N~vfAkvl~~ir~~~~~D~t~~   85 (337)
T KOG1580|consen    6 SWLPERGRFLICAGGIFVCYFVYGIQQEKITRGKYGLPGESIEKFTFALALVFFQCTANTVFAKVLFLIRKKTEIDNTPT   85 (337)
T ss_pred             cccccccceeEEecchhheehhhhhHHHHhhccccCCCCcchheehHHHHHHHHHHHHHHHHHHhheeecccccccCCcc
Confidence            446888899999999999999999999999652         36899999999999998776533 22332  2345677


Q ss_pred             HHHHHHHHHHHhhHHHHHhhhhcCchhHHHHHhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHHhccCCCCC
Q 018776           85 KTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTS  164 (350)
Q Consensus        85 ~~~~~ls~~~~~~~~l~~~al~~~s~~~~~v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~~~~~~~  164 (350)
                      +.|...++.|.++++.+|.|++|+|+|++++.|||+|||||+++.++  .+|+|+|+++.+++++++||+++.+.+.+..
T Consensus        86 ~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~--~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~  163 (337)
T KOG1580|consen   86 KMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLF--AHKSYHWRKYCCVLMIVVGVALFMYKENKVG  163 (337)
T ss_pred             hHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhh--hcccccHHHHHHHHHHHHHHHHhhccccccC
Confidence            88999999999999999999999999999999999999999999999  8999999999999999999999999876432


Q ss_pred             ---CCchHHHHHHHHHHHHHHHhHHHHHHHHHhhCCCCChHhHHHHHHHhHHHHHHHHhhccchHHHHHHHHHhchHHHH
Q 018776          165 ---PNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYG  241 (350)
Q Consensus       165 ---~~~~~~G~~~~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~  241 (350)
                         .+...+|-++.++|..+|++.+..|||+.+.+. .+..+||+|+|+++...+-..++.+||+++...|..+||..|.
T Consensus       164 g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq-~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~  242 (337)
T KOG1580|consen  164 GAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQ-RTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFW  242 (337)
T ss_pred             CCcccccchHHHHHHHHHHhcccchhHHHHHHHhhc-cCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHH
Confidence               234578999999999999999999999987765 3456899999999998887778889999999889999999888


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhccCC
Q 018776          242 VLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPAD  315 (350)
Q Consensus       242 ~l~l~~~~~~l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~~k~  315 (350)
                      .+.+.++++++||.++|..+..+||++.|++++.|+.++++.|+++|++|++..||+|.++++.|...-....+
T Consensus       243 ~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~GK  316 (337)
T KOG1580|consen  243 DLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDGK  316 (337)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcCC
Confidence            88888899999999999999999999999999999999999999999999999999999999999998876554

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=100.00  E-value=1.3e-32  Score=258.67  Aligned_cols=287  Identities=18%  Similarity=0.188  Sum_probs=225.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhccCCCChhhHHHHHHHHHHHHHHHHh---cccC--CCCCChhHHHHHHHHHHHhhH
Q 018776           24 QFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLIYLQ---GFTT--KQMMNPWKTYVKLSAVLMGSH   98 (350)
Q Consensus        24 ~l~~~~~gi~~~~~~~~~~~e~i~~~~~f~~p~~lt~~q~~~~~~~~~~~---~~~~--~~~~~~~~~~~~ls~~~~~~~   98 (350)
                      +....+..||..+..+.++||++++  .|++|.++++.|++++.+...+.   +.++  +.+++.++.+++.|++++.+.
T Consensus         2 ~~~~~~~~w~~~~~~~~~~NK~~l~--~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   79 (302)
T TIGR00817         2 QTGLLFGLWYFLNVYFNIYNKKLLN--VFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGH   79 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHh--hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            5677888999999999999999985  48999999999988865443321   2222  122345677788899988889


Q ss_pred             HHHHhhhhcCchhHHHHHhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHHhccCCCCCCCchHHHHHHHHHH
Q 018776           99 GLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGA  178 (350)
Q Consensus        99 ~l~~~al~~~s~~~~~v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~~~~~~~~~~~~~G~~~~l~s  178 (350)
                      .++|.|++|++++++++++++.|++++++++++  +|||++++++++++++++|+++....+.    +++..|++++++|
T Consensus        80 ~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~--~~e~~~~~~~~~l~l~~~Gv~l~~~~~~----~~~~~G~~~~l~a  153 (302)
T TIGR00817        80 VTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFF--LGQEFPSTLWLSLLPIVGGVALASDTEL----SFNWAGFLSAMIS  153 (302)
T ss_pred             HHHHHHHHhccHHHHHHHHhcchHHHHHHHHHH--hCCCCcHHHHHHHHHHHHHHhhhcCCcc----cccHHHHHHHHHH
Confidence            999999999999999999999999999999999  8999999999999999999988754332    4567899999999


Q ss_pred             HHHHHhHHHHHHHHHhhCCCCChHhHHHHHHHhHHHHHHHHhhccchHHHHH-HHHH----hchH-HHHHH-HHHHHHHH
Q 018776          179 LIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAW-NSCS----QHLY-VYGVL-VFEAMATF  251 (350)
Q Consensus       179 ~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~-~~~~----~~~~-~~~~l-~l~~~~~~  251 (350)
                      +++++++.++.||..++. +.++.+.+.|++.+++++++|.....++..... +...    ..+. .+... ..+..+..
T Consensus       154 ~~~~a~~~v~~k~~~~~~-~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (302)
T TIGR00817       154 NITFVSRNIFSKKAMTIK-SLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFH  232 (302)
T ss_pred             HHHHHHHHHHHHHhhccC-CCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHH
Confidence            999999999999987632 246788899999998888888655433221111 1101    0111 22212 22222333


Q ss_pred             HHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhccCCCCcc
Q 018776          252 IGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADDKPI  319 (350)
Q Consensus       252 l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~~k~~~~~  319 (350)
                      +.+..++.+++++||+++++.++++|++++++|++++||++|+.+++|.++++.|+++|++.|.+|++
T Consensus       233 ~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~~~~  300 (302)
T TIGR00817       233 FYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQKPK  300 (302)
T ss_pred             HHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhccCcC
Confidence            45567788999999999999999999999999999999999999999999999999999987755543

specificities overlap.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=100.00  E-value=1.2e-31  Score=256.66  Aligned_cols=286  Identities=14%  Similarity=0.165  Sum_probs=222.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhhhhccCCCChhhHHHHHHHHHHHHHH---HHhcccCCCC----CChhHHHHHHHHH
Q 018776           21 KWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLI---YLQGFTTKQM----MNPWKTYVKLSAV   93 (350)
Q Consensus        21 ~~~~l~~~~~gi~~~~~~~~~~~e~i~~~~~f~~p~~lt~~q~~~~~~~~---~~~~~~~~~~----~~~~~~~~~ls~~   93 (350)
                      ...+++..+..||.....+...+|++++  .+|+|++++++|++++.++.   +..+.++.++    +..+++.+++|++
T Consensus        46 ~~~~~~~~~~~wy~~s~~~~~~nK~vl~--~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~  123 (350)
T PTZ00343         46 FKWKLALLFLTWYALNVLYVVDNKLALN--MLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLC  123 (350)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHH--hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHH
Confidence            3567888999999999999999999985  47899999999998864432   2223332211    2346678889999


Q ss_pred             HHhhHHHHHhhhhcCchhHHHHHhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHHhccCCCCCCCchHHHHH
Q 018776           94 LMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVI  173 (350)
Q Consensus        94 ~~~~~~l~~~al~~~s~~~~~v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~~~~~~~~~~~~~G~~  173 (350)
                      +.......+.|+++++++.++++|++.|++++++++++  +|||++++++++++++++|+.+.+.+|.    +++..|++
T Consensus       124 ~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~--l~ek~s~~~~l~l~l~v~Gv~l~~~~~~----~~~~~G~~  197 (350)
T PTZ00343        124 HLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILF--LKQFLNLYAYLSLIPIVGGVALASVKEL----HFTWLAFW  197 (350)
T ss_pred             HHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHH--hCCCccHHHHHHHHHHHHHHHheecccc----hhHHHHHH
Confidence            87777778999999999999999999999999999999  8999999999999999999999886553    45788999


Q ss_pred             HHHHHHHHHHhHHHHHHHHHhhCC----CCChHhHHHHHHHhHHHHHHHHhh-ccch-HHHHHHHH----Hhch--HHHH
Q 018776          174 MISGALIMDSFLGNLQEAIFTMNP----ETTQMEMLFCSTVVGLPMLIPPML-LTGE-LFKAWNSC----SQHL--YVYG  241 (350)
Q Consensus       174 ~~l~s~~~~a~~~v~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~-~~g~-~~~~~~~~----~~~~--~~~~  241 (350)
                      ++++|++++++++++.|+.+++.+    +.++.+...++.+++.++++|..+ .++. ....+...    ....  ..+.
T Consensus       198 ~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~  277 (350)
T PTZ00343        198 CAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIF  277 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHH
Confidence            999999999999999999887542    234555666678888888887654 3331 11111100    0111  1112


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhccC
Q 018776          242 VLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPA  314 (350)
Q Consensus       242 ~l~l~~~~~~l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~~k  314 (350)
                      .++.++++.++.+...|.+++++||+++++.+++||++++++|+++|||++|+.+++|.+++++|+++|++.|
T Consensus       278 ~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~k  350 (350)
T PTZ00343        278 KIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLFK  350 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhcC
Confidence            2233334443444555679999999999999999999999999999999999999999999999999999864

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=100.00  E-value=1.2e-33  Score=262.20  Aligned_cols=294  Identities=17%  Similarity=0.271  Sum_probs=245.3

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhhhhccCCCChhhHHHHHHHHHHHHHHHH---hcccCC---CCCChhHHHHHHHHH
Q 018776           20 PKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLIYL---QGFTTK---QMMNPWKTYVKLSAV   93 (350)
Q Consensus        20 p~~~~l~~~~~gi~~~~~~~~~~~e~i~~~~~f~~p~~lt~~q~~~~~~~~~~---~~~~~~---~~~~~~~~~~~ls~~   93 (350)
                      ++..+..++..-||.+...+..+|++++++++|++|.++|.+|+.++.+....   .+..++   +++.++++.+++|+.
T Consensus        13 ~~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~   92 (316)
T KOG1441|consen   13 KKILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLV   92 (316)
T ss_pred             chhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHH
Confidence            35667777888899999999999999998889999999999998886554332   222222   235789999999999


Q ss_pred             HHhhHHHHHhhhhcCchhHHHHHhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHHhccCCCCCCCchHHHHH
Q 018776           94 LMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVI  173 (350)
Q Consensus        94 ~~~~~~l~~~al~~~s~~~~~v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~~~~~~~~~~~~~G~~  173 (350)
                      ++.+.+++|.|++|+++++++++|+++|+++.++++++  .+|++++..++++++++.||.+.+.+|.    ++++.|++
T Consensus        93 ~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~--~~~~~s~~~~lsL~piv~GV~ias~~e~----~fn~~G~i  166 (316)
T KOG1441|consen   93 FCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLL--LGKTYSSMTYLSLLPIVFGVAIASVTEL----SFNLFGFI  166 (316)
T ss_pred             HHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHH--hCCCCcceEEEEEEEeeeeEEEeeeccc----cccHHHHH
Confidence            99999999999999999999999999999999999999  8999999999999999999999999874    68999999


Q ss_pred             HHHHHHHHHHhHHHHHHHHHhh-CCCCChHhHHHHHHHhHHHHHH-HHhh-ccchHHHHHHHHHhchHHHHHHHHHHHHH
Q 018776          174 MISGALIMDSFLGNLQEAIFTM-NPETTQMEMLFCSTVVGLPMLI-PPML-LTGELFKAWNSCSQHLYVYGVLVFEAMAT  250 (350)
Q Consensus       174 ~~l~s~~~~a~~~v~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~l-~~~~-~~g~~~~~~~~~~~~~~~~~~l~l~~~~~  250 (350)
                      .++++.+..++++++.|+++++ ..+.++++++.|++++++.+++ |... .+++....+.....+-..+. ..+..++.
T Consensus       167 ~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~-~~~~sv~~  245 (316)
T KOG1441|consen  167 SAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLI-LLLNSVLA  245 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHH-HHHHHHHH
Confidence            9999999999999999999863 3446889999999999998888 6543 23332200000000111222 23334888


Q ss_pred             HHHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhccCCCCccc
Q 018776          251 FIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADDKPIK  320 (350)
Q Consensus       251 ~l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~~k~~~~~~  320 (350)
                      +..|+..|.+++++||+|.++.+++|.++.++.|+++|++++|+.|..|+++.+.|+++|++.|.++|++
T Consensus       246 f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~~  315 (316)
T KOG1441|consen  246 FLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKKG  315 (316)
T ss_pred             HHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhcc
Confidence            8889999999999999999999999999999999999999999999999999999999999999877754

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.98  E-value=1.4e-32  Score=243.12  Aligned_cols=287  Identities=24%  Similarity=0.377  Sum_probs=236.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhccCCCChhhHHHHHHHHHHHHH--HHHhcccCCCCCChhHHHHHHHHHHHhhHHHHH
Q 018776           25 FLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVL--IYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTK  102 (350)
Q Consensus        25 l~~~~~gi~~~~~~~~~~~e~i~~~~~f~~p~~lt~~q~~~~~~~--~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~l~~  102 (350)
                      -+..+++++.+||.+.+..|.+.+. .....+.+|+.|+++-..-  .+-..+...+++.|.|.|+..-..+...++++|
T Consensus         4 a~~ai~~vf~GCcsnvv~lE~L~~~-~pgsgNLITFaqFlFia~eGlif~skf~~~k~kiplk~Y~i~V~mFF~vnv~NN   82 (330)
T KOG1583|consen    4 AAAAISLVFGGCCSNVVFLELLVRN-EPGSGNLITFAQFLFIATEGLIFTSKFFTVKPKIPLKDYAITVAMFFIVNVTNN   82 (330)
T ss_pred             HHHHHHHHHHhhhchHHHHHHHHHh-CCCCeeehHHHHHHHHHHhceeeeccccccCCCCchhhhheehheeeeeeeecc
Confidence            3456788999999999999999754 4467899999998764321  222334445578999999988777888999999


Q ss_pred             hhhhc-CchhHHHHHhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHHhccCCC---C------CC----C--
Q 018776          103 GSLAF-LNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQ---T------SP----N--  166 (350)
Q Consensus       103 ~al~~-~s~~~~~v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~~~~~---~------~~----~--  166 (350)
                      +++++ ++.|.++++|+.+++.+|++++++  .||||+.+|+.+++++++|+++..+....   .      .+    +  
T Consensus        83 ~al~f~I~~PlHiIfRsgsll~nM~~g~il--~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~  160 (330)
T KOG1583|consen   83 YALKFNIPMPLHIIFRSGSLLANMILGWIL--LGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFF  160 (330)
T ss_pred             ceeeecccceEEEEEecCcHHHHHHHHHHh--ccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccch
Confidence            99999 999999999999999999999999  89999999999999999999998764321   1      01    1  


Q ss_pred             chHHHHHHHHHHHHHHHhHHHHHHHHHhhCCCCChHhHHHHHHHhHHHHHHHHhhccchHHHHHHHHHhc----------
Q 018776          167 FSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQH----------  236 (350)
Q Consensus       167 ~~~~G~~~~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~----------  236 (350)
                      ....|+.+...+.+.+|..+++||+.++++++ ++.|.+||++..++|.++   +..+++.+.+.....+          
T Consensus       161 ~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGK-h~~EalFytH~LsLP~Fl---f~~~div~~~~~~~~se~~~~p~~g~  236 (330)
T KOG1583|consen  161 WWLIGIALLVFALLLSAYMGIYQETTYQKYGK-HWKEALFYTHFLSLPLFL---FMGDDIVSHWRLAFKSESYLIPLLGF  236 (330)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ChHHHHHHHHHhccchHH---HhcchHHHHHHHHhcCcceeccccCc
Confidence            24689999999999999999999999999986 588999999999999875   3455666655543322          


Q ss_pred             --hHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhccC
Q 018776          237 --LYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPA  314 (350)
Q Consensus       237 --~~~~~~l~l~~~~~~l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~~k  314 (350)
                        |..|.+++.+++.++++.-..+.+..+++++|++++-++||.+++++|++.|++|+|+++|+|..++++|..+|.-..
T Consensus       237 ~vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~~  316 (330)
T KOG1583|consen  237 KVPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANVW  316 (330)
T ss_pred             cccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence              455667777777777776667888899999999999999999999999999999999999999999999999997654


Q ss_pred             CCCc
Q 018776          315 DDKP  318 (350)
Q Consensus       315 ~~~~  318 (350)
                      .+.|
T Consensus       317 ~~~~  320 (330)
T KOG1583|consen  317 NHPK  320 (330)
T ss_pred             cCcc
Confidence            4333

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.97  E-value=1.3e-28  Score=224.08  Aligned_cols=295  Identities=18%  Similarity=0.233  Sum_probs=244.1

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhhhhccCCCChhhHHHHHHHHHHHHHHHH-h--cc--cCCCCCChhHHHHHHHHHH
Q 018776           20 PKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLIYL-Q--GF--TTKQMMNPWKTYVKLSAVL   94 (350)
Q Consensus        20 p~~~~l~~~~~gi~~~~~~~~~~~e~i~~~~~f~~p~~lt~~q~~~~~~~~~~-~--~~--~~~~~~~~~~~~~~ls~~~   94 (350)
                      |+..+-+..+++-..+.+.-.+.||.+.++++||...++.+.|.+++++..+. +  +.  .++-.....|+|+++++++
T Consensus         8 ~~~~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf   87 (314)
T KOG1444|consen    8 KKQSSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLF   87 (314)
T ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHH
Confidence            44444444555555566666788999999999998888889999998766544 2  21  1222345568899999999


Q ss_pred             HhhHHHHHhhhhcCchhHHHHHhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHHhccCCCCCCCchHHHHHH
Q 018776           95 MGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIM  174 (350)
Q Consensus        95 ~~~~~l~~~al~~~s~~~~~v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~~~~~~~~~~~~~G~~~  174 (350)
                      .++...+..+++|+|+|+++++|+.+|+.|++.+.++  +|+|+++..|.++..+.+|....+.+|.    .++..|+.|
T Consensus        88 ~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf--~~~~~~~~v~~Sv~~m~~~s~~~~~~d~----sf~~~gY~w  161 (314)
T KOG1444|consen   88 VGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLF--FGKRPSNKVWASVFAMIIGSVAAAFTDL----SFNLRGYSW  161 (314)
T ss_pred             HHHHHHccccccccCchHHHHHhhchHHHHHHhHHhh--cCcCchhhHHHHHHHHHHHHHhhccccc----eecchhHHH
Confidence            9999999999999999999999999999999999999  8999999999999999999999988885    467789999


Q ss_pred             HHHHHHHHHhHHHHHHHHHhhCCCCChHhHHHHHHHhHHHHHHHHhhccchHHHHHHHH---HhchHHHHHHHHHHHHHH
Q 018776          175 ISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSC---SQHLYVYGVLVFEAMATF  251 (350)
Q Consensus       175 ~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~---~~~~~~~~~l~l~~~~~~  251 (350)
                      ++.++++.+.+.++.|+..+.. +.+.+++++|++++++|.+....+.+||+. ...+.   +..+..+..+.+++++++
T Consensus       162 ~~~n~~~~a~~~v~~kk~vd~~-~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~-~l~~~~~~~~~~~~~~~~~lScv~gf  239 (314)
T KOG1444|consen  162 ALANCLTTAAFVVYVKKSVDSA-NLNKFGLVFYNNLLSLPPLLILSFITGELD-ALSLNFDNWSDSSVLVVMLLSCVMGF  239 (314)
T ss_pred             HHHHHHHHHHHHHHHHHhhccc-cccceeEEeehhHHHHHHHHHHHHHhcchH-HHHhhcccccchhHHHHHHHHHHHHH
Confidence            9999999999999998876643 346789999999999999888778888876 33322   122345667888999998


Q ss_pred             HHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhccCCCCccccc
Q 018776          252 IGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADDKPIKRT  322 (350)
Q Consensus       252 l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~~k~~~~~~~~  322 (350)
                      .-.++.++|.+..||+|.+++|...+..+.+..++++|+++++.+.+|+.+.+.|..+|++.+.|+|+.++
T Consensus       240 ~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~~~~  310 (314)
T KOG1444|consen  240 GISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKKQPP  310 (314)
T ss_pred             HHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhccCCC
Confidence            88999999999999999999997777777777777888999999999999999999999999977765544

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.96  E-value=6.3e-27  Score=219.93  Aligned_cols=292  Identities=15%  Similarity=0.213  Sum_probs=220.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHH--HHhhhhhccCCCChhhHHHHHHHHHHHHHHHH-hcccC------CCCCChhHHHHHHH
Q 018776           21 KWQQFLICSSGFFFGYLVNG--VCEEYVYNRLQFSYGWYFTFIQGFVYLVLIYL-QGFTT------KQMMNPWKTYVKLS   91 (350)
Q Consensus        21 ~~~~l~~~~~gi~~~~~~~~--~~~e~i~~~~~f~~p~~lt~~q~~~~~~~~~~-~~~~~------~~~~~~~~~~~~ls   91 (350)
                      +|+.+...+.|-..+.+..+  .....+-++ +++.|.+-++..++...++... ..+|+      ...+.+|++|+.++
T Consensus         8 ~~~~~~~~~lgQ~lsl~~~~t~~~s~~l~~~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla   86 (334)
T PF06027_consen    8 TRRFWIVLLLGQVLSLCITGTGTFSSLLANK-GVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLA   86 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHHHHHHHHHhc-CccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHH
Confidence            44555556666666655444  444445333 8888987777665543222111 11111      12357899999999


Q ss_pred             HHHHhhHHHHHhhhhcCchhHHHHHhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHHhccCCCC-----CCC
Q 018776           92 AVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQT-----SPN  166 (350)
Q Consensus        92 ~~~~~~~~l~~~al~~~s~~~~~v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~~~~~~-----~~~  166 (350)
                      ++...++.+.+.|++|++++..+++.++..++++++++++  +|+|+++.|+++++++++|+.++...|...     +++
T Consensus        87 ~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~f--L~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~  164 (334)
T PF06027_consen   87 LLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIF--LKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGS  164 (334)
T ss_pred             HHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHH--HHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCC
Confidence            9999999999999999999999999999999999999999  999999999999999999999998887532     234


Q ss_pred             chHHHHHHHHHHHHHHHhHHHHHHHHHhhCCCCChHhHHHHHHHhHHHHHHHHh-hccchHHHHHHHHHhchHHHHHHHH
Q 018776          167 FSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPM-LLTGELFKAWNSCSQHLYVYGVLVF  245 (350)
Q Consensus       167 ~~~~G~~~~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~g~~~~~~~~~~~~~~~~~~l~l  245 (350)
                      +...|+++++++++++|++++++|+..++.   +..+.+....++++++..+.. +++.+-.   +....++.....+..
T Consensus       165 ~~i~GDll~l~~a~lya~~nV~~E~~v~~~---~~~~~lg~~Glfg~ii~~iq~~ile~~~i---~~~~w~~~~~~~~v~  238 (334)
T PF06027_consen  165 NPILGDLLALLGAILYAVSNVLEEKLVKKA---PRVEFLGMLGLFGFIISGIQLAILERSGI---ESIHWTSQVIGLLVG  238 (334)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHhcccC---CHHHHHHHHHHHHHHHHHHHHHheehhhh---hccCCChhhHHHHHH
Confidence            679999999999999999999999988764   467777777778877766543 3332211   111223333444444


Q ss_pred             HHHHHHHHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhccCCCCcccc
Q 018776          246 EAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADDKPIKR  321 (350)
Q Consensus       246 ~~~~~~l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~~k~~~~~~~  321 (350)
                      .+++.++.+......++..||+..++-.......+++.++++||+++++..++|.++++.|..+|...+.+..+++
T Consensus       239 ~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~~~~~  314 (334)
T PF06027_consen  239 YALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPEEEAR  314 (334)
T ss_pred             HHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCcccccc
Confidence            4555555566677889999999999988899999999999999999999999999999999999998776554333

Some of the sequences in this family are annotated as putative membrane proteins.

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.95  E-value=4.2e-27  Score=211.36  Aligned_cols=281  Identities=18%  Similarity=0.276  Sum_probs=219.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhccCCCChhhHHHHHHHHHHHHHHH----Hhccc--CCCCCChhHHHH----HHHHHH
Q 018776           25 FLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLIY----LQGFT--TKQMMNPWKTYV----KLSAVL   94 (350)
Q Consensus        25 l~~~~~gi~~~~~~~~~~~e~i~~~~~f~~p~~lt~~q~~~~~~~~~----~~~~~--~~~~~~~~~~~~----~ls~~~   94 (350)
                      .+.++.++|++.+.-..+|++.-  ..|++|++++..|.++-.++..    +...+  +.+.+..|+.|+    +.++..
T Consensus        17 ~L~lVl~yY~~Si~Ltf~~~~~~--~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalat   94 (349)
T KOG1443|consen   17 TLALVLLYYFLSIGLTFYFKWLT--KNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALAT   94 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhh--cCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhh
Confidence            44466778887777777777774  3488999999999877433221    22222  223355677776    778888


Q ss_pred             HhhHHHHHhhhhcCchhHHHHHhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHHhccCCCCCCCchHHHHHH
Q 018776           95 MGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIM  174 (350)
Q Consensus        95 ~~~~~l~~~al~~~s~~~~~v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~~~~~~~~~~~~~G~~~  174 (350)
                      ++...++|+|++|++.+.|++.||++++|+.+++.+++  -||++|.-.+.++++.+|++++++.+.    +++..|+.+
T Consensus        95 a~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~--lEk~~w~L~l~v~lI~~Glflft~KsT----qf~i~Gf~l  168 (349)
T KOG1443|consen   95 ALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFK--LEKFRWALVLIVLLIAVGLFLFTYKST----QFNIEGFFL  168 (349)
T ss_pred             hcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHH--hHHHHHHHHHHHHHHhhheeEEEeccc----ceeehhHHH
Confidence            89999999999999999999999999999999999994  699999999999999999999999864    688999999


Q ss_pred             HHHHHHHHHhHHHHHHHHHhhCC--CCChHhHHHHHHHhHHHHHHHH-hhccchHHHHHH--HH-HhchHHH---HHHHH
Q 018776          175 ISGALIMDSFLGNLQEAIFTMNP--ETTQMEMLFCSTVVGLPMLIPP-MLLTGELFKAWN--SC-SQHLYVY---GVLVF  245 (350)
Q Consensus       175 ~l~s~~~~a~~~v~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~l~~-~~~~g~~~~~~~--~~-~~~~~~~---~~l~l  245 (350)
                      +++|.++.|+++.+.+.++++++  +.+|..++++..++....++|. +..+|.....+.  +. ..+...+   ..+.+
T Consensus       169 v~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l  248 (349)
T KOG1443|consen  169 VLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISL  248 (349)
T ss_pred             HHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHH
Confidence            99999999999999999998764  3578888888877766656554 455664322111  11 1121222   33444


Q ss_pred             HHHHHHHHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhcc
Q 018776          246 EAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLP  313 (350)
Q Consensus       246 ~~~~~~l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~~  313 (350)
                      .+..+++--.+.|....+++..+.++++..|.+.+++++.++.+|+++..+|.|..+++.|+..|...
T Consensus       249 ~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~~  316 (349)
T KOG1443|consen  249 GGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRNE  316 (349)
T ss_pred             HHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhccC
Confidence            44444444466788999999999999999999999999999999999999999999999999999554

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.94  E-value=4.1e-24  Score=204.48  Aligned_cols=300  Identities=10%  Similarity=0.030  Sum_probs=203.7

Q ss_pred             HHHHHHHHHHHhhhhhccCCCChhhHHHHHHHHHHHHHHH----HhcccCCCCCChhHH---HHHHHHHHHhhHHHHHhh
Q 018776           32 FFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLIY----LQGFTTKQMMNPWKT---YVKLSAVLMGSHGLTKGS  104 (350)
Q Consensus        32 i~~~~~~~~~~~e~i~~~~~f~~p~~lt~~q~~~~~~~~~----~~~~~~~~~~~~~~~---~~~ls~~~~~~~~l~~~a  104 (350)
                      +-.+|..+..+.+..++ .+.+ |..+.+..+....++..    .+..+++.++.+|+.   +...+++......+.+.+
T Consensus        21 ~q~~~~~~~~~~k~a~~-~G~~-~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~~~~~~~~~g   98 (358)
T PLN00411         21 TETSVVGISTLFKVATS-KGLN-IYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGSMYVITGYIG   98 (358)
T ss_pred             HHHHHHHHHHHHHHHHH-CCCC-ccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44556666666676663 3433 44466777666543322    122111122233443   444555544455688999


Q ss_pred             hhcCchhHHHHHhhcchHHHHHHHHhhccC------ccccChhhHHHHHHHHHHHHHHhccCCC----------------
Q 018776          105 LAFLNYPAQLMFKSTKVLPVMVMGAFIPGL------RRKYPAHEYVSALLLVVGLILFTLADAQ----------------  162 (350)
Q Consensus       105 l~~~s~~~~~v~ks~~pi~v~il~~l~~~l------~~r~~~~~~~~v~l~~~Gv~l~~~~~~~----------------  162 (350)
                      ++|++.+.+.++.++.|++++++++++  +      |||.++++++++++.++|+.+....+..                
T Consensus        99 l~~tsa~~asll~~~~P~~~~lla~~~--~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~  176 (358)
T PLN00411         99 IEYSNPTLASAISNITPALTFILAIIF--RMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQL  176 (358)
T ss_pred             HhhccHHHHHHHHHhhHHHHHHHHHHH--HhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccccccccccccccc
Confidence            999999999999999999999999988  4      8999999999999999999987653211                


Q ss_pred             -----CCCCchHHHHHHHHHHHHHHHhHHHHHHHHHhhCCCCChHhHHHHHHHh-HHHHHHHHhhccchHHHHHHHHHhc
Q 018776          163 -----TSPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVV-GLPMLIPPMLLTGELFKAWNSCSQH  236 (350)
Q Consensus       163 -----~~~~~~~~G~~~~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~g~~~~~~~~~~~~  236 (350)
                           ....+...|.+++++|++++|++++.+++..++++  +.....++...+ +.+..++....+++-...+. ...+
T Consensus       177 ~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~--~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~  253 (358)
T PLN00411        177 SPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYP--AAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWI-IHFD  253 (358)
T ss_pred             ccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--cHhHHHHHHHHHHHHHHHHHHHHHccCCcccce-eccc
Confidence                 00112366999999999999999999999887763  233444444433 33333333333321011110 0111


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhccCCC
Q 018776          237 LYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADD  316 (350)
Q Consensus       237 ~~~~~~l~l~~~~~~l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~~k~~  316 (350)
                      ...+..++.+ +.+.+++.+|++++++.||.++++..++.|++++++|++++||++++.+++|.++++.|+++..+.+++
T Consensus       254 ~~~~~i~y~~-i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~~  332 (358)
T PLN00411        254 ITLITIVTMA-IITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKAN  332 (358)
T ss_pred             hHHHHHHHHH-HHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhhh
Confidence            2233333433 445678899999999999999999999999999999999999999999999999999999999876655


Q ss_pred             Cccccccccchhhhhhhccccch
Q 018776          317 KPIKRTATSSFKVNIRKLSFSER  339 (350)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~  339 (350)
                      +.+.+....+++|+.|..+.++|
T Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~~  355 (358)
T PLN00411        333 EEKDQLLSFSGKEKTPLLLNGKN  355 (358)
T ss_pred             hhhhcccCccccccchhhhhccc
Confidence            54333333345666666665555

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.91  E-value=4.8e-21  Score=179.94  Aligned_cols=272  Identities=12%  Similarity=0.166  Sum_probs=191.4

Q ss_pred             HHHHHHHHhhhhhccCCCChhhHHHHHHHHHHHHHHHHhcccCCCCCChhHHHHHHHHHH-HhhHHHHHhhhhc-CchhH
Q 018776           35 GYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVL-MGSHGLTKGSLAF-LNYPA  112 (350)
Q Consensus        35 ~~~~~~~~~e~i~~~~~f~~p~~lt~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~-~~~~~l~~~al~~-~s~~~  112 (350)
                      .+.......|...  .+++ |..+++..+.+..+...+...+   ++.+++.....++.. .....+.+.+++| ++.+.
T Consensus        15 ~Wg~~~~~~k~~~--~~~~-p~~~~~~R~~~a~~~l~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~   88 (299)
T PRK11453         15 VWGLNFVVIKVGL--HNMP-PLMLAGLRFMLVAFPAIFFVAR---PKVPLNLLLGYGLTISFGQFAFLFCAINFGMPAGL   88 (299)
T ss_pred             HHhhhHHHHHHHH--hcCC-HHHHHHHHHHHHHHHHHHHhcC---CCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence            3334444455444  2343 8888999977643332221121   123444444445543 3455567889988 68888


Q ss_pred             HHHHhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHHhccCCCCCCCchHHHHHHHHHHHHHHHhHHHHHHHH
Q 018776          113 QLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGNLQEAI  192 (350)
Q Consensus       113 ~~v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~l  192 (350)
                      ..++.++.|++++++++++  +|||+++++++++++.++|+.+...++.+ ..+.+..|+++++.++++++.++++++|.
T Consensus        89 a~~l~~~~pi~~~ll~~~~--l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~-~~~~~~~G~~l~l~aal~~a~~~v~~~~~  165 (299)
T PRK11453         89 ASLVLQAQAFFTIVLGAFT--FGERLQGKQLAGIALAIFGVLVLIEDSLN-GQHVAMLGFMLTLAAAFSWACGNIFNKKI  165 (299)
T ss_pred             HHHHHHhHHHHHHHHHHHH--hcCcCcHHHHHHHHHHHHhHHHhccccCC-CcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8988999999999999999  99999999999999999999988754322 12335679999999999999999999997


Q ss_pred             HhhCCCCChHhHHHHHHHhHHHHHHHH-hhccchHHHHHHHHHhchH-HHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHH
Q 018776          193 FTMNPETTQMEMLFCSTVVGLPMLIPP-MLLTGELFKAWNSCSQHLY-VYGVLVFEAMATFIGQVSVLSLIALFGAATTA  270 (350)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~g~~~~~~~~~~~~~~-~~~~l~l~~~~~~l~~~~~~~~i~~~sa~t~s  270 (350)
                      .++.+........++...++....... ...+++..........++. ++..++++.+++.+++.+++..+++.++.+.+
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s  245 (299)
T PRK11453        166 MSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVA  245 (299)
T ss_pred             hcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence            654332222333445544443322221 1223321110001111223 34456777889999999999999999999999


Q ss_pred             HHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhccCC
Q 018776          271 MVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPAD  315 (350)
Q Consensus       271 v~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~~k~  315 (350)
                      ++..++|+++.++|++++||++++.+++|.+++++|+++..+.++
T Consensus       246 ~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~  290 (299)
T PRK11453        246 PLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR  290 (299)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence            999999999999999999999999999999999999999887664

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.91  E-value=2e-23  Score=179.87  Aligned_cols=292  Identities=15%  Similarity=0.192  Sum_probs=225.5

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHhhhhhccCCCChhhHHHHHHHHHHHHHH-HHhcccC-CCCCChhHHHHHHHHHHHh
Q 018776           19 RPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLI-YLQGFTT-KQMMNPWKTYVKLSAVLMG   96 (350)
Q Consensus        19 ~p~~~~l~~~~~gi~~~~~~~~~~~e~i~~~~~f~~p~~lt~~q~~~~~~~~-~~~~~~~-~~~~~~~~~~~~ls~~~~~   96 (350)
                      .|....+..|.+.|.     -...|+++.+..+|+....+.++|.+++++.+ .++..+- .-|....++|++++++...
T Consensus         6 s~~~~~lsYc~sSIl-----mTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR~t~aK~WfpiSfLLv~   80 (309)
T COG5070           6 SELTASLSYCFSSIL-----MTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFRLTKAKKWFPISFLLVV   80 (309)
T ss_pred             ccchHHHHHHHHHHH-----HHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhheehhhhhhhcCHHHHHHH
Confidence            344445555655544     34668999999999999999999999886543 3332111 1123456778999999989


Q ss_pred             hHHHHHhhhhcCchhHHHHHhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHHhccCCCCC---CCchHHHHH
Q 018776           97 SHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTS---PNFSMIGVI  173 (350)
Q Consensus        97 ~~~l~~~al~~~s~~~~~v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~~~~~~~---~~~~~~G~~  173 (350)
                      ..+.+..+++|+++|.|+++|..+.+.++..+.++  +|+|.+-.+..+.+++++.-.+..++|.+..   ...--.|++
T Consensus        81 MIyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~--Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN~GY~  158 (309)
T COG5070          81 MIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLF--FGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILNPGYL  158 (309)
T ss_pred             HHHhcccceeeeeeeHHHHhccceeehhHhhHHHH--hcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccCCceE
Confidence            99999999999999999999999999999999999  9999999999999999999999999987432   112346999


Q ss_pred             HHHHHHHHHHhHHHHHHHHHhhCCCCChHhHHHHHHHhHHHHHHHHhhccchHHHHHHHHH-hchHHHHHHHHHHHHHHH
Q 018776          174 MISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCS-QHLYVYGVLVFEAMATFI  252 (350)
Q Consensus       174 ~~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~-~~~~~~~~l~l~~~~~~l  252 (350)
                      |+..+++.++.+....++..+-.. ...++.++|+|++++|+++...+..+|+.+. +... -.++....+..+++|++.
T Consensus       159 Wm~~NclssaafVL~mrkri~ltN-f~d~dtmfYnNllslPiL~~~s~~~edws~~-n~annl~~d~l~am~ISgl~svg  236 (309)
T COG5070         159 WMFTNCLSSAAFVLIMRKRIKLTN-FKDFDTMFYNNLLSLPILLSFSFLFEDWSPG-NLANNLSVDSLMAMFISGLCSVG  236 (309)
T ss_pred             EEehhhHhHHHHHHHHHHhhcccc-cchhhHHHHhhhHHHHHHHHHHHHhccCCcc-hhhcCCChHHHHHHHHHHHHHhh
Confidence            999999999887766554433221 2347899999999999988765554443221 1111 122344456667777765


Q ss_pred             HHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhccCCCCcc
Q 018776          253 GQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADDKPI  319 (350)
Q Consensus       253 ~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~~k~~~~~  319 (350)
                      -.++.-++++.+|+++.+++|.+++....+.|.++||+|.+...+..+.+-+....+|.+.|.++++
T Consensus       237 iSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~q  303 (309)
T COG5070         237 ISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQQ  303 (309)
T ss_pred             hhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            5677789999999999999999999999999999999999999999999999999999998876543

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.90  E-value=2.8e-21  Score=181.16  Aligned_cols=257  Identities=14%  Similarity=-0.012  Sum_probs=179.5

Q ss_pred             HHhhhhhccCCCChhhHHHHHHHHHHHHHHHHhcccCCCCCChhHHHHHHH-HHHHhhHHHHHhhhhc----CchhHHHH
Q 018776           41 VCEEYVYNRLQFSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLS-AVLMGSHGLTKGSLAF----LNYPAQLM  115 (350)
Q Consensus        41 ~~~e~i~~~~~f~~p~~lt~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~ls-~~~~~~~~l~~~al~~----~s~~~~~v  115 (350)
                      ...|...  ..+ .|..+.+..+....++..+...+++.++.+ +++...+ +.+.....+.+.+++|    .+.....+
T Consensus        21 ~~~k~~~--~~~-~P~~~~~~R~~~a~l~l~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~a~~~~~~~~~a~~a~~   96 (295)
T PRK11689         21 GLIRGVS--ESL-GPVGGAAMIYSVSGLLLLLTVGFPRLRQFP-KRYLLAGGLLFVSYEICLALSLGYANTRRQAIEVGM   96 (295)
T ss_pred             HHHHHHH--ccC-ChHHHHHHHHHHHHHHHHHHcccccccccc-HHHHHHHhHHHHHHHHHHHHHHHHhhccccchHHHH
Confidence            4455443  234 388888888777554443322222222233 3344444 3455667777777765    46666778


Q ss_pred             HhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHHhccCCCCC-------CCchHHHHHHHHHHHHHHHhHHHH
Q 018776          116 FKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTS-------PNFSMIGVIMISGALIMDSFLGNL  188 (350)
Q Consensus       116 ~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~~~~~~~-------~~~~~~G~~~~l~s~~~~a~~~v~  188 (350)
                      +.++.|++++++++++  +|||+++++++++++.++|++++..++...+       ..++..|+++++.+++++|.++++
T Consensus        97 l~~~~Pi~~~ll~~~~--~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~A~~~v~  174 (295)
T PRK11689         97 VNYLWPSLTILFAVLF--NGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGLAFIGAFIWAAYCNV  174 (295)
T ss_pred             HHHHhHHHHHHHHHHH--hcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHHHHHHHHHHHHHHHH
Confidence            8999999999999999  8999999999999999999998876543110       113457999999999999999999


Q ss_pred             HHHHHhhCCCCChHhHHHHHHHhHHHHHHHHhhccchHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHH
Q 018776          189 QEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAAT  268 (350)
Q Consensus       189 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~l~l~~~~~~l~~~~~~~~i~~~sa~t  268 (350)
                      .||..++.   ++....+   ..+...+.+....+++..     ...++..|..++..++++.++++++++++++.+|.+
T Consensus       175 ~k~~~~~~---~~~~~~~---~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~  243 (295)
T PRK11689        175 TRKYARGK---NGITLFF---ILTALALWIKYFLSPQPA-----MVFSLPAIIKLLLAAAAMGFGYAAWNVGILHGNMTL  243 (295)
T ss_pred             HhhccCCC---CchhHHH---HHHHHHHHHHHHHhcCcc-----ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHH
Confidence            99975443   2333221   112222222222222211     112233444444445678889999999999999999


Q ss_pred             HHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhccC
Q 018776          269 TAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPA  314 (350)
Q Consensus       269 ~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~~k  314 (350)
                      +++..+++|++++++|++++||++++.+++|.++++.|+.+.....
T Consensus       244 ~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~  289 (295)
T PRK11689        244 LATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLAT  289 (295)
T ss_pred             HHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhH
Confidence            9999999999999999999999999999999999999998886544

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.90  E-value=2.8e-21  Score=177.42  Aligned_cols=241  Identities=15%  Similarity=0.115  Sum_probs=186.7

Q ss_pred             ChhhHHHHHHHHHHHHHHHH-hcccCCCCCChhHHHHHHHHH-HHhhHHHHHhhhhcCchhHHHHHhhcchHHHHHHHHh
Q 018776           53 SYGWYFTFIQGFVYLVLIYL-QGFTTKQMMNPWKTYVKLSAV-LMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAF  130 (350)
Q Consensus        53 ~~p~~lt~~q~~~~~~~~~~-~~~~~~~~~~~~~~~~~ls~~-~~~~~~l~~~al~~~s~~~~~v~ks~~pi~v~il~~l  130 (350)
                      ..+..+++.++++..+...+ ...+  +++.+++.+...+.+ ..++..+.+.|++|++.+...++.++.|+++++++.+
T Consensus        16 ~~~~~~~~~r~~~~~l~l~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l   93 (260)
T TIGR00950        16 VPLYFAVFRRLIFALLLLLPLLRRR--PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDL   93 (260)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhc--cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHH
Confidence            45777788887776544332 2122  234455666666655 5678889999999999999999999999999999999


Q ss_pred             hccCccccChhhHHHHHHHHHHHHHHhccCCCCCCCchHHHHHHHHHHHHHHHhHHHHHHHHHhhCCCCChHhHHHHHHH
Q 018776          131 IPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTV  210 (350)
Q Consensus       131 ~~~l~~r~~~~~~~~v~l~~~Gv~l~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~  210 (350)
                      +  +|||++++++.++++.++|+.+....+.   .+.+..|+.+.+.++++++.+.++.|+..++.+ .++.....+...
T Consensus        94 ~--~~e~~~~~~~~gi~i~~~Gv~li~~~~~---~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~-~~~~~~~~~~~~  167 (260)
T TIGR00950        94 M--GKERPRKLVLLAAVLGLAGAVLLLSDGN---LSINPAGLLLGLGSGISFALGTVLYKRLVKKEG-PELLQFTGWVLL  167 (260)
T ss_pred             H--ccCCCcHHHHHHHHHHHHhHHhhccCCc---ccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCC-chHHHHHHHHHH
Confidence            9  8999999999999999999998875442   234678999999999999999999998776532 223344445566


Q ss_pred             hHHHHHHHHhhccchHHHHHHHHHhchHHH-HHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcC
Q 018776          211 VGLPMLIPPMLLTGELFKAWNSCSQHLYVY-GVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFT  289 (350)
Q Consensus       211 ~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~-~~l~l~~~~~~l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfg  289 (350)
                      ++.+++++.....++...      .++..+ ..++++.+++.+++.++++++++.++.+.+++..++|+++.+++++++|
T Consensus       168 ~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~  241 (260)
T TIGR00950       168 LGALLLLPFAWFLGPNPQ------ALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILG  241 (260)
T ss_pred             HHHHHHHHHHHhcCCCCC------cchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhC
Confidence            677666665444332111      012223 3455667778889999999999999999999999999999999999999


Q ss_pred             CCcchhhhhhHHHHHHHH
Q 018776          290 KPLTEQHGTGLLLIAMGI  307 (350)
Q Consensus       290 e~~t~~~~iG~~lvl~Gv  307 (350)
                      |++++.+++|.++++.|+
T Consensus       242 E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       242 ETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             CCCCHHHHHHHHHHHHhc
Confidence            999999999999999986

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.89  E-value=1.5e-20  Score=175.99  Aligned_cols=248  Identities=13%  Similarity=0.088  Sum_probs=184.7

Q ss_pred             hhhHHHHHHHHHHHHHH--HHhcccC-CCCCChhHHHHHHHHHH-HhhHHHHHhhh-hcCchhHHHHHhhcchHHHHHHH
Q 018776           54 YGWYFTFIQGFVYLVLI--YLQGFTT-KQMMNPWKTYVKLSAVL-MGSHGLTKGSL-AFLNYPAQLMFKSTKVLPVMVMG  128 (350)
Q Consensus        54 ~p~~lt~~q~~~~~~~~--~~~~~~~-~~~~~~~~~~~~ls~~~-~~~~~l~~~al-~~~s~~~~~v~ks~~pi~v~il~  128 (350)
                      .|..+++.+++++.++.  +....++ .++++.++.....+.+. .....+.+.+. ++++.+..+++.++.|+++++++
T Consensus        35 ~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla  114 (292)
T PRK11272         35 PPLMMAGVRFLIAGILLLAFLLLRGHPLPTLRQWLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFS  114 (292)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHH
Confidence            47888899988754432  2222221 12233455555666654 45677888898 99999999999999999999999


Q ss_pred             HhhccCccccChhhHHHHHHHHHHHHHHhccCCCCCCCchHHHHHHHHHHHHHHHhHHHHHHHHHhhCCCCChHhHHHHH
Q 018776          129 AFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCS  208 (350)
Q Consensus       129 ~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~  208 (350)
                      + +  +|||+++++++++++.++|+.+...++.   .+.+..|+++.+++++++|.++++.||..++    ++.....+.
T Consensus       115 ~-~--~~e~~~~~~~~~~~la~~Gv~ll~~~~~---~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~----~~~~~~~~~  184 (292)
T PRK11272        115 R-L--FGIRTRKLEWLGIAIGLAGIVLLNSGGN---LSGNPWGAILILIASASWAFGSVWSSRLPLP----VGMMAGAAE  184 (292)
T ss_pred             H-H--hcccCchhHHHHHHHHHHhHHHHhcCcc---cccchHHHHHHHHHHHHHHHHHHHHHhcCCC----cchHHHHHH
Confidence            7 4  5899999999999999999998865422   1345679999999999999999998885432    123344566


Q ss_pred             HHhHHHHHHHHhhccchHHHHHHHHHhchH-HHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHh
Q 018776          209 TVVGLPMLIPPMLLTGELFKAWNSCSQHLY-VYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLI  287 (350)
Q Consensus       209 ~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~-~~~~l~l~~~~~~l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~l  287 (350)
                      ..++.+.+.+.....++...    ...++. +...++++.+++.+++.++++++++.++.+.++...++|+++.++|+++
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~  260 (292)
T PRK11272        185 MLAAGVVLLIASLLSGERLT----ALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGL  260 (292)
T ss_pred             HHHHHHHHHHHHHHcCCccc----ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence            66666655554333322110    011222 3345566777888999999999999999999999999999999999999


Q ss_pred             cCCCcchhhhhhHHHHHHHHHHHhccCC
Q 018776          288 FTKPLTEQHGTGLLLIAMGITLKLLPAD  315 (350)
Q Consensus       288 fge~~t~~~~iG~~lvl~Gv~ly~~~k~  315 (350)
                      +||++++.+++|.++++.|+++.++.++
T Consensus       261 l~E~~t~~~iiG~~lIi~gv~~~~~~~~  288 (292)
T PRK11272        261 GGETLSPIEWLALGVIVFAVVLVTLGKY  288 (292)
T ss_pred             cCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999876543

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.89  E-value=2.8e-25  Score=196.62  Aligned_cols=293  Identities=14%  Similarity=0.144  Sum_probs=234.5

Q ss_pred             HHHHHHHHHHHHHhhhhhcc--CCCChhhHHHHHHHHHHHHHHHH-h-------cc-cCCC---CCChhHHHHHHHHHHH
Q 018776           30 SGFFFGYLVNGVCEEYVYNR--LQFSYGWYFTFIQGFVYLVLIYL-Q-------GF-TTKQ---MMNPWKTYVKLSAVLM   95 (350)
Q Consensus        30 ~gi~~~~~~~~~~~e~i~~~--~~f~~p~~lt~~q~~~~~~~~~~-~-------~~-~~~~---~~~~~~~~~~ls~~~~   95 (350)
                      +-...+.+...+.|+++++.  -.-+.|.+.++.|+++...++.. .       +. ..+.   +-...++..++++.+.
T Consensus        34 s~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi  113 (347)
T KOG1442|consen   34 SLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFI  113 (347)
T ss_pred             cceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheee
Confidence            33344445666788888876  34678999999999997554322 1       11 1111   1133466788999999


Q ss_pred             hhHHHHHhhhhcCchhHHHHHhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHHhccCCCCCCCchHHHHHHH
Q 018776           96 GSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMI  175 (350)
Q Consensus        96 ~~~~l~~~al~~~s~~~~~v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~~~~~~~~~~~~~G~~~~  175 (350)
                      +++.++|++|+|+++++|.+-|+.+.+|+.++++++  +|+|-+..-..++++++.|--+-.-.|+. .+..++.|.++.
T Consensus       114 ~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvl--lkqkTs~~~~~~C~lIi~GF~lGvdqE~~-~~~ls~~GvifG  190 (347)
T KOG1442|consen  114 LMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVL--LKQKTSFFALGCCLLIILGFGLGVDQEGS-TGTLSWIGVIFG  190 (347)
T ss_pred             eehhccceehhhcceEEEEeccchhhhHHHHhHHhh--cccccccccceeehhheehheeccccccc-cCccchhhhHHH
Confidence            999999999999999999999999999999999999  99999999999999998887665543322 235689999999


Q ss_pred             HHHHHHHHhHHHHHHHHHhhCCCCChHhHHHHHHHhHHHHHHHHhhccchHHHHHHHHHh-chHHHHHHHHHHHHHHHHH
Q 018776          176 SGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQ-HLYVYGVLVFEAMATFIGQ  254 (350)
Q Consensus       176 l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~-~~~~~~~l~l~~~~~~l~~  254 (350)
                      +.|.++-|+..++.||.....++ ..+.+.+|+|+.++.+++|.+++.||+.+.+.+.+. ...+|..+.+++++++.-+
T Consensus       191 VlaSl~vAlnaiytkk~l~~v~~-~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mg  269 (347)
T KOG1442|consen  191 VLASLAVALNAIYTKKVLPPVGD-CIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMG  269 (347)
T ss_pred             HHHHHHHHHHHHhhheecccccC-eehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhh
Confidence            99999999999999876654332 357889999999999999998899998776654332 2235667778888877767


Q ss_pred             HHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhccCCCCccccccccc
Q 018776          255 VSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADDKPIKRTATSS  326 (350)
Q Consensus       255 ~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~~k~~~~~~~~~~~~  326 (350)
                      +...+-||.+||+|+++-++.|.+...++++.+++|.-+..-|-|-.+++.|...|++.|.++.+|+...+|
T Consensus       270 yvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~~~~~s  341 (347)
T KOG1442|consen  270 YVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKASAQRS  341 (347)
T ss_pred             heeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhhccCCC
Confidence            777788999999999999999999999999999999999999999999999999999999877766654443

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.88  E-value=9.6e-20  Score=170.66  Aligned_cols=279  Identities=12%  Similarity=0.053  Sum_probs=194.4

Q ss_pred             cCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccCCCChhhHHHHHHHHHHHHHHHH--hcccCCCCCChhHHHHHHHHH
Q 018776           16 LTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLIYL--QGFTTKQMMNPWKTYVKLSAV   93 (350)
Q Consensus        16 ~~~~p~~~~l~~~~~gi~~~~~~~~~~~e~i~~~~~f~~p~~lt~~q~~~~~~~~~~--~~~~~~~~~~~~~~~~~ls~~   93 (350)
                      ..+.|++.-..+++.+.... ...+...|....  .++ |..+.+.+++...++..+  +..+++.+++.++.....+++
T Consensus         5 ~~~~~~~~~~~~~~la~~~~-~~~~~~~K~~~~--~~~-~~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~g~~   80 (293)
T PRK10532          5 LRKLPVWLPILLLLIAMASI-QSGASLAKSLFP--LVG-APGVTALRLALGTLILIAIFKPWRLRFAKEQRLPLLFYGVS   80 (293)
T ss_pred             ccccccchHHHHHHHHHHHH-HhhHHHHHHHHH--HcC-HHHHHHHHHHHHHHHHHHHHhHHhccCCHHHHHHHHHHHHH
Confidence            34567766655555554433 344555666653  243 667888898876544332  211111223445556667777


Q ss_pred             HHhhHHHHHhhhhcCchhHHHHHhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHHhccCCCCCCCchHHHHH
Q 018776           94 LMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVI  173 (350)
Q Consensus        94 ~~~~~~l~~~al~~~s~~~~~v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~~~~~~~~~~~~~G~~  173 (350)
                      ......+.++|++|+|.+..+++..+.|+++++++      +||.++  ...+.+.++|+.++...+.+ ..+.+..|++
T Consensus        81 ~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~------~~~~~~--~~~~~i~~~Gv~li~~~~~~-~~~~~~~G~l  151 (293)
T PRK10532         81 LGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS------SRRPVD--FVWVVLAVLGLWFLLPLGQD-VSHVDLTGAA  151 (293)
T ss_pred             HHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh------cCChHH--HHHHHHHHHHHheeeecCCC-cccCChHHHH
Confidence            77778888999999999999999999999988664      345444  44566778998876543221 1234578999


Q ss_pred             HHHHHHHHHHhHHHHHHHHHhhCCCCChHhHHHHHHHhHHHHHHHHhhccchHHHHHHHHHhchHHH-HHHHHHHHHHHH
Q 018776          174 MISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVY-GVLVFEAMATFI  252 (350)
Q Consensus       174 ~~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~-~~l~l~~~~~~l  252 (350)
                      +.++++++++.+.++.||..+++   ++... .+...++...+++.....+...      ..++..+ ..++++.+++.+
T Consensus       152 l~l~aa~~~a~~~v~~r~~~~~~---~~~~~-~~~~~~~~~~l~~~~~~~~~~~------~~~~~~~~~~l~lgv~~t~~  221 (293)
T PRK10532        152 LALGAGACWAIYILSGQRAGAEH---GPATV-AIGSLIAALIFVPIGALQAGEA------LWHWSILPLGLAVAILSTAL  221 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccC---CchHH-HHHHHHHHHHHHHHHHHccCcc------cCCHHHHHHHHHHHHHHHHH
Confidence            99999999999999999876543   23333 3444555555555433322100      0122223 235677888889


Q ss_pred             HHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhccCCCC
Q 018776          253 GQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADDK  317 (350)
Q Consensus       253 ~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~~k~~~  317 (350)
                      ++.++++++++.+|.++++..+++|++++++|++++||++++.+++|.+++++|++.+.+..+++
T Consensus       222 ~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~~  286 (293)
T PRK10532        222 PYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRRE  286 (293)
T ss_pred             HHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCCC
Confidence            99999999999999999999999999999999999999999999999999999999998765443

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.86  E-value=2.6e-19  Score=168.01  Aligned_cols=257  Identities=10%  Similarity=0.085  Sum_probs=175.4

Q ss_pred             HHHHHHhhhhhccCCCChhhHHHHHHHHHHHHHH--HH--hcccCC-C-CCChhHHH--HHHH-HHHHhhHHHHHhhhhc
Q 018776           37 LVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLI--YL--QGFTTK-Q-MMNPWKTY--VKLS-AVLMGSHGLTKGSLAF  107 (350)
Q Consensus        37 ~~~~~~~e~i~~~~~f~~p~~lt~~q~~~~~~~~--~~--~~~~~~-~-~~~~~~~~--~~ls-~~~~~~~~l~~~al~~  107 (350)
                      ...+..-+..   .+.+ |..+++.|++++..+.  ..  ++..+. + ...+++.+  ...+ +....++.+.++|+++
T Consensus        21 g~~~~~~k~~---~~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~   96 (296)
T PRK15430         21 GIAPAYFKLI---YYVP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNN   96 (296)
T ss_pred             HHHHHHHHHh---cCCC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            3344444543   2344 7888899988764322  11  211000 0 01122322  2243 4456788999999999


Q ss_pred             CchhHHHHHhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHHhccCCCCCCCchHHHHHHHHHHHHHHHhHHH
Q 018776          108 LNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGN  187 (350)
Q Consensus       108 ~s~~~~~v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v  187 (350)
                      +|.+...++.++.|++++++++++  +|||+++++++++++.++|+.++...+.    +..    .+.+++++++|++.+
T Consensus        97 ~~~~~a~~l~~~~Pi~v~l~~~~~--l~E~~~~~~~~g~~l~~~Gv~li~~~~~----~~~----~~~l~aa~~~a~~~i  166 (296)
T PRK15430         97 HHMLEASLGYFINPLVNIVLGMIF--LGERFRRMQWLAVILAICGVLVQLWTFG----SLP----IIALGLAFSFAFYGL  166 (296)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHH--hcCCCcHHHHHHHHHHHHHHHHHHHHcC----Ccc----HHHHHHHHHHHHHHH
Confidence            999999999999999999999999  9999999999999999999998864332    111    356778899999999


Q ss_pred             HHHHHHhhCCCCChHhHHHHHHHhHHHHHHHHhhccchHHHHHHHHHhchH-HHHHHHHHHHHHHHHHHHHHHHHHhhcH
Q 018776          188 LQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLY-VYGVLVFEAMATFIGQVSVLSLIALFGA  266 (350)
Q Consensus       188 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~-~~~~l~l~~~~~~l~~~~~~~~i~~~sa  266 (350)
                      ++||..++. ..+......+..+++.+..++.  ..... .   .....+. .+..+++.++++.+++.++++++++.+|
T Consensus       167 ~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~---~~~~~~~~~~~~~~~~g~~t~i~~~~~~~a~~~~~a  239 (296)
T PRK15430        167 VRKKIAVEA-QTGMLIETMWLLPVAAIYLFAI--ADSST-S---HMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRL  239 (296)
T ss_pred             HHHhcCCCC-chhHHHHHHHHHHHHHHHHHHH--ccCCc-c---cccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH
Confidence            988753321 1112223334444443332211  11110 0   0011222 2333444455677999999999999999


Q ss_pred             HHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhccC
Q 018776          267 ATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPA  314 (350)
Q Consensus       267 ~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~~k  314 (350)
                      .++++..+++|++++++|++++||++++.+++|+++++.|+.+.....
T Consensus       240 ~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~  287 (296)
T PRK15430        240 STLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDA  287 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999988888876543

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.82  E-value=4e-18  Score=158.74  Aligned_cols=216  Identities=12%  Similarity=0.063  Sum_probs=159.2

Q ss_pred             hHHHHHHHH-HHHhhHHHHHhhhhcCchhHHHHHhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHHhccCCC
Q 018776           84 WKTYVKLSA-VLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQ  162 (350)
Q Consensus        84 ~~~~~~ls~-~~~~~~~l~~~al~~~s~~~~~v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~~~~~  162 (350)
                      ++.+...+. .......+.+.|+++.|.+....+.++.|++++++++++  +|||+++++++++++++.|+.+....+..
T Consensus        62 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~--~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~  139 (281)
T TIGR03340        62 FWLLLAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLT--LGETLSPLAWLGILIITLGLLVLGLSRFA  139 (281)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHhccccc
Confidence            344444443 466788899999999999999999999999999999999  89999999999999999999988765432


Q ss_pred             CCCCchHHHHHHHHHHHHHHHhHHHHHHHHHhhCCC-CChHhHHHHHHHhH-HHHHHHHhhccchHHHHHHHHHhchHHH
Q 018776          163 TSPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPE-TTQMEMLFCSTVVG-LPMLIPPMLLTGELFKAWNSCSQHLYVY  240 (350)
Q Consensus       163 ~~~~~~~~G~~~~l~s~~~~a~~~v~~~~l~~~~~~-~~~~~~~~~~~~~~-~~~~l~~~~~~g~~~~~~~~~~~~~~~~  240 (350)
                         ..+..|+.+.+.++++++.+.+..|+..++.+. .+......+..... .|+..+. ...++..  ..  ......+
T Consensus       140 ---~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~--~~~~~~~  211 (281)
T TIGR03340       140 ---QHRRKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLY-LKRHGRS--MF--PYARQIL  211 (281)
T ss_pred             ---ccchhHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHH-HHHhccc--hh--hhHHHHH
Confidence               234578888999999999999987765332211 11111222222222 2322211 1111100  00  0111234


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHH
Q 018776          241 GVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITL  309 (350)
Q Consensus       241 ~~l~l~~~~~~l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~l  309 (350)
                      ..++.+.+++.+++.++++++++.++.+.+...++.|++++++|++++||+++..+++|.++++.|+.+
T Consensus       212 ~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       212 PSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            456677788889999999999999999999999999999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.81  E-value=1.8e-18  Score=157.18  Aligned_cols=214  Identities=17%  Similarity=0.260  Sum_probs=168.7

Q ss_pred             hhHHHHHHHHHHHhhHHHHHhhhhcCchhHHHHHhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHHhccCCC
Q 018776           83 PWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQ  162 (350)
Q Consensus        83 ~~~~~~~ls~~~~~~~~l~~~al~~~s~~~~~v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~~~~~  162 (350)
                      ...++.+++++|+..+.+.+.++++++.+++++++++++++|+++++++  +|||.+++||.++++.++|+.++..++..
T Consensus        16 ~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~--L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~   93 (244)
T PF04142_consen   16 DTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLL--LKRRLSRRQWLALFLLVAGVVLVQLSSSQ   93 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHH--HHcccchhhHHHHHHHHHHHheeecCCcc
Confidence            3456788999999999999999999999999999999999999999999  99999999999999999999998776542


Q ss_pred             C-----C--------CCchHHHHHHHHHHHHHHHhHHHHHHHHHhhCCCCChHhHHHHHHHhHHHHHHHHhhcc-chHHH
Q 018776          163 T-----S--------PNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLT-GELFK  228 (350)
Q Consensus       163 ~-----~--------~~~~~~G~~~~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~  228 (350)
                      .     +        ......|+++++.+++++|+.+++.||++|+.+ .+.+..+.....++.++.++..... ++...
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~-~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~  172 (244)
T PF04142_consen   94 SSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSN-VSLWIQNMQLYLFGILFNLLALLLSDGSAIS  172 (244)
T ss_pred             ccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccc-hhHHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence            2     0        123579999999999999999999999999864 4555556666666777666543322 21111


Q ss_pred             HHHHHHh-chHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHH
Q 018776          229 AWNSCSQ-HLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLI  303 (350)
Q Consensus       229 ~~~~~~~-~~~~~~~l~l~~~~~~l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lv  303 (350)
                      ...+.+. ++..|.    ..+..+++-+.....+|+.+...-+....+.-+++.++|+++||.++|....+|..+|
T Consensus       173 ~~g~f~G~~~~~~~----~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V  244 (244)
T PF04142_consen  173 ESGFFHGYSWWVWI----VIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV  244 (244)
T ss_pred             cCCchhhcchHHHH----HHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence            0111111 112222    2344556677788899999999999999999999999999999999999999998764

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.79  E-value=1.4e-17  Score=154.21  Aligned_cols=226  Identities=19%  Similarity=0.211  Sum_probs=177.6

Q ss_pred             HHHHHHHHHHHhhHHHHHhhhhcCchhHHHHHhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHHhccCCC--
Q 018776           85 KTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQ--  162 (350)
Q Consensus        85 ~~~~~ls~~~~~~~~l~~~al~~~s~~~~~v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~~~~~--  162 (350)
                      .+..+++++|...+-+.+.++.+.+.+++++....+...|+++..++  ++||.+++||.++++.++|+.++..+..+  
T Consensus        93 lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~--L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~  170 (345)
T KOG2234|consen   93 LKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLI--LRRKLSRLQWMALVLLFAGVALVQLPSLSPT  170 (345)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHH--HhhhhhHHHHHHHHHHHHHHHHHhccCCCCC
Confidence            34667889999988899999999999999999999999999999999  99999999999999999999999843221  


Q ss_pred             -C----CCCchHHHHHHHHHHHHHHHhHHHHHHHHHhhCCCCChHhHHHHHHHhHHHHHHHHhhcc-chHHHHHHHHHhc
Q 018776          163 -T----SPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLT-GELFKAWNSCSQH  236 (350)
Q Consensus       163 -~----~~~~~~~G~~~~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~  236 (350)
                       .    ...+.+.|+..++.+++++++.++|.||++|+.. .+.+-.+.....+|.++.+...+.. ++......+.+.+
T Consensus       171 ~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~-~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~  249 (345)
T KOG2234|consen  171 GAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSN-VSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGY  249 (345)
T ss_pred             CccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccc
Confidence             1    1245789999999999999999999999998743 4444444455556666665554332 2211111223333


Q ss_pred             hH-HHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhccCC
Q 018776          237 LY-VYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPAD  315 (350)
Q Consensus       237 ~~-~~~~l~l~~~~~~l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~~k~  315 (350)
                      .. .|..++    ..+++-+.....+|+.+...-.....+..+++.+.|+.+||.++|....+|+.+|+..+.+|+..++
T Consensus       250 s~~vw~vVl----~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~  325 (345)
T KOG2234|consen  250 SSIVWLVVL----LNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPA  325 (345)
T ss_pred             cHHHHHHHH----HHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCc
Confidence            33 333333    3445666777889999999999999999999999999999999999999999999999999996666


Q ss_pred             CC
Q 018776          316 DK  317 (350)
Q Consensus       316 ~~  317 (350)
                      +.
T Consensus       326 ~~  327 (345)
T KOG2234|consen  326 RD  327 (345)
T ss_pred             cc
Confidence            54

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.77  E-value=1.2e-15  Score=141.41  Aligned_cols=214  Identities=15%  Similarity=0.163  Sum_probs=162.6

Q ss_pred             HHHHHHHH-HHHhhHHHHHhhhhcCchhHHHHHhhcchHHHHHHHH-hhccCccccChhhHHHHHHHHHHHHHHhccCCC
Q 018776           85 KTYVKLSA-VLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGA-FIPGLRRKYPAHEYVSALLLVVGLILFTLADAQ  162 (350)
Q Consensus        85 ~~~~~ls~-~~~~~~~l~~~al~~~s~~~~~v~ks~~pi~v~il~~-l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~~~~~  162 (350)
                      +.....+. .......+.+.++++++.+..+++.++.|+++.++++ ++  +|||++++++.++++.++|+.++...+..
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~--~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~  147 (292)
T COG0697          70 LLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLL--LGERLSLLQILGILLALAGVLLILLGGGG  147 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHH--ccCCCcHHHHHHHHHHHHhHHheecCCCc
Confidence            33444444 4567788899999999999999999999999999997 66  69999999999999999999999987653


Q ss_pred             CCCCchHHHHHHHHHHHHHHHhHHHHHHHHHhhCCCCChHhHHH-HHHHhHHHHH-HHHhhccchHHHHHHHHHhchH-H
Q 018776          163 TSPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLF-CSTVVGLPML-IPPMLLTGELFKAWNSCSQHLY-V  239 (350)
Q Consensus       163 ~~~~~~~~G~~~~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~-l~~~~~~g~~~~~~~~~~~~~~-~  239 (350)
                      .... ...|..+.+.+.++++++.+.++++. +.   ++..... +... ..... .+......+       ...... .
T Consensus       148 ~~~~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~-------~~~~~~~~  214 (292)
T COG0697         148 GGIL-SLLGLLLALAAALLWALYTALVKRLS-RL---GPVTLALLLQLL-LALLLLLLFFLSGFG-------APILSRAW  214 (292)
T ss_pred             chhH-HHHHHHHHHHHHHHHHHHHHHHHHhc-CC---ChHHHHHHHHHH-HHHHHHHHHHhcccc-------ccCCHHHH
Confidence            2111 47899999999999999999999876 32   2333333 2222 11111 111111100       011112 2


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhcc
Q 018776          240 YGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLP  313 (350)
Q Consensus       240 ~~~l~l~~~~~~l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~~  313 (350)
                      ...+..+.+++.+++.+++..+++.++...++...++|+.+++++++++||+++..+++|.++++.|+.+....
T Consensus       215 ~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         215 LLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            23344555555579999999999999999999999999999999999999999999999999999999998876

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.72  E-value=2e-16  Score=133.69  Aligned_cols=142  Identities=17%  Similarity=0.284  Sum_probs=119.4

Q ss_pred             HHHHHHHHHHHHHhHHHHHHHHHhhC----CCCChHhHHHHHHHhHHHHHHHHhhccchHHHHHHH--HHh-----chHH
Q 018776          171 GVIMISGALIMDSFLGNLQEAIFTMN----PETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNS--CSQ-----HLYV  239 (350)
Q Consensus       171 G~~~~l~s~~~~a~~~v~~~~l~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~--~~~-----~~~~  239 (350)
                      |+++++.|.++.|++++++|+++++.    .+.++.++++|+++.++++++|..+..++.......  ...     .+..
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            78899999999999999999999874    456889999999999999998876554443211111  111     2345


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhc
Q 018776          240 YGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLL  312 (350)
Q Consensus       240 ~~~l~l~~~~~~l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~  312 (350)
                      +..+..+++.+++.++..+.+++++||++.++++++|++.++++|+++|||++|+.+++|+++.+.|+.+|+|
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            5566777888888999999999999999999999999999999999999999999999999999999999986

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.72  E-value=6.9e-16  Score=137.66  Aligned_cols=224  Identities=16%  Similarity=0.165  Sum_probs=176.6

Q ss_pred             HHHHHHHHHhhHHHHHhhhhcCchhHHHHHhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHHhccCCCC---
Q 018776           87 YVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQT---  163 (350)
Q Consensus        87 ~~~ls~~~~~~~~l~~~al~~~s~~~~~v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~~~~~~---  163 (350)
                      +++.+++...+..+.|.++.+++.+.++++|.+..+||.+++..+  ++++++.+||++++.+.+|++++...|...   
T Consensus        89 fl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~--Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~  166 (372)
T KOG3912|consen   89 FLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMF--LNRTITGRQWLGILFVSLGLVIVGSLDVHLVTD  166 (372)
T ss_pred             ecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHH--HhcccchhhHHHHHHHHhhhheeeeeecccccC
Confidence            456899999999999999999999999999999999999999999  999999999999999999999998775421   


Q ss_pred             ---CCCchHHHHHHHHHHHHHHHhHHHHHHHHHhhCCCCChHhHHHHHHHhHHHHHHHH----hh-ccc---------hH
Q 018776          164 ---SPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPP----ML-LTG---------EL  226 (350)
Q Consensus       164 ---~~~~~~~G~~~~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~-~~g---------~~  226 (350)
                         +.+....|+++++++-+.-|++.+++||.++++ +.+|.+...|..++++.++-..    .. ..|         .+
T Consensus       167 p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~-nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~  245 (372)
T KOG3912|consen  167 PYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKS-NVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVL  245 (372)
T ss_pred             CccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhc-cCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcch
Confidence               123568999999999999999999999998876 3678888888888775544221    11 111         11


Q ss_pred             ---HHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHH
Q 018776          227 ---FKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLI  303 (350)
Q Consensus       227 ---~~~~~~~~~~~~~~~~l~l~~~~~~l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lv  303 (350)
                         .+.+......|.....+....++-++.|+.-....+..||+|..+.-.+|..+..++++....|.+...|+.|.++.
T Consensus       246 eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliL  325 (372)
T KOG3912|consen  246 EDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLIL  325 (372)
T ss_pred             hhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHH
Confidence               12222233344332222222222223456667889999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcc
Q 018776          304 AMGITLKLLP  313 (350)
Q Consensus       304 l~Gv~ly~~~  313 (350)
                      +.|+.+|+-.
T Consensus       326 i~Gi~lY~~i  335 (372)
T KOG3912|consen  326 IMGIILYNQI  335 (372)
T ss_pred             HHHHHHHHHH
Confidence            9999999643

>TIGR00803 nst UDP-galactose transporter

Probab=99.70  E-value=7.5e-17  Score=145.05  Aligned_cols=192  Identities=17%  Similarity=0.254  Sum_probs=143.1

Q ss_pred             CchhHHHHHhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHHhccCCCC-----------------------C
Q 018776          108 LNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQT-----------------------S  164 (350)
Q Consensus       108 ~s~~~~~v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~~~~~~-----------------------~  164 (350)
                      +++|.++.+|+++++++++.++.+  .+||++..++++.++++.|+......|.+.                       .
T Consensus         2 isvPa~~~~~s~~l~~v~l~~~~~--~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~   79 (222)
T TIGR00803         2 LSVPIHIIFKQNNLVLIALGNLLA--AGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLM   79 (222)
T ss_pred             ccccchHHHHhcchHHHHHhcccc--cceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccc
Confidence            578999999999999999999999  899999999999999999998654433210                       1


Q ss_pred             CCchHHHHHHHHHHHHHHHhHHHHHHHHHhhCCCCChHhHHHHHHHhHHHHHHHHhhcc------chHHHHHHHHHhchH
Q 018776          165 PNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLT------GELFKAWNSCSQHLY  238 (350)
Q Consensus       165 ~~~~~~G~~~~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~------g~~~~~~~~~~~~~~  238 (350)
                      ..+...|..+.+.++.++++.++++|+..++++      .++|.+.+++++..+.....      ++....+.+...+|.
T Consensus        80 ~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (222)
T TIGR00803        80 FGNPVVGLSAVLSALLSSGFAGVYFEKILKDGD------TMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPT  153 (222)
T ss_pred             cccHHHHHHHHHHHHHHHhhhHHHHHHcccCCC------CchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCch
Confidence            135688888899999999999999999866532      22455444444433221111      111111111222333


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHH
Q 018776          239 VYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLK  310 (350)
Q Consensus       239 ~~~~l~l~~~~~~l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly  310 (350)
                      ....+   .+..+.++.+...++++.|+.+.+++.++|++++.++|+++|||+++..+++|..+++.|+++|
T Consensus       154 ~~~~~---~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       154 AVWIV---GLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             HHHHH---HHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            22222   2345577788999999999999999999999999999999999999999999999999998876

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.66  E-value=1.6e-18  Score=152.52  Aligned_cols=282  Identities=15%  Similarity=0.196  Sum_probs=198.7

Q ss_pred             cCCCChhhHHHHHHHHHHHHHHH--HhcccCCCCCChhHHHHHHHHHHHhhHHHHHhhhhcCchhHHHHHhhcchHHHHH
Q 018776           49 RLQFSYGWYFTFIQGFVYLVLIY--LQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMV  126 (350)
Q Consensus        49 ~~~f~~p~~lt~~q~~~~~~~~~--~~~~~~~~~~~~~~~~~~ls~~~~~~~~l~~~al~~~s~~~~~v~ks~~pi~v~i  126 (350)
                      +.+.+.|..=||..... +.+.+  ...+|++..+..|++|+.+++...-++.+-..|.||++....+++.+...+.+++
T Consensus        42 ~k~iN~Pt~QtFl~Y~L-LalVY~~~~~fR~~~~~~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~  120 (336)
T KOG2766|consen   42 RKGINAPTSQTFLNYVL-LALVYGPIMLFRRKYIKAKWRHYILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLV  120 (336)
T ss_pred             hccCCCccHHHHHHHHH-HHHHHhhHHHhhhHHHHHHHHHhhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHH
Confidence            34467776555544322 11122  1345555556789999999999888888889999999999999999999999999


Q ss_pred             HHHhhccCccccChhhHHHHHHHHHHHHHHhccCCC----CCCCchHHHHHHHHHHHHHHHhHHHHHHHHHhhCCCCChH
Q 018776          127 MGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQ----TSPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQM  202 (350)
Q Consensus       127 l~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~~~~~----~~~~~~~~G~~~~l~s~~~~a~~~v~~~~l~~~~~~~~~~  202 (350)
                      ++|++  +|.||++.++.++++++.|++++...|-.    ..+++...|+.++++.+.++|+.++.+|.+.++   .+..
T Consensus       121 lsw~f--LktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn---~d~~  195 (336)
T KOG2766|consen  121 LSWFF--LKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKN---ADRV  195 (336)
T ss_pred             HHHHH--HHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeeeccccHHHHHhc---CcHH
Confidence            99999  99999999999999999999998877652    224567899999999999999999999988776   3567


Q ss_pred             hHHHHHHHhHHHHHHHHhhccchHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHhHHHHHHHH
Q 018776          203 EMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLL  282 (350)
Q Consensus       203 ~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~l~l~~~~~~l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~  282 (350)
                      |++....++++++..+-.+.+..-...   .+.+.....++. ..++-++-+.+.-..+|..||+..++--......+++
T Consensus       196 elm~~lgLfGaIIsaIQ~i~~~~~~~t---l~w~~~i~~yl~-f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~  271 (336)
T KOG2766|consen  196 ELMGFLGLFGAIISAIQFIFERHHVST---LHWDSAIFLYLR-FALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLL  271 (336)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhccceee---EeehHHHHHHHH-HHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHH
Confidence            888777777776654432211110000   001111111222 2333334444455678999999998888888888888


Q ss_pred             HHHHhcCCCcchhhhhhHHHHHHHHHHHhccC-CCCccccccccchhhhhhhccccchhhh
Q 018776          283 LSYLIFTKPLTEQHGTGLLLIAMGITLKLLPA-DDKPIKRTATSSFKVNIRKLSFSEREEA  342 (350)
Q Consensus       283 ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~~k-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (350)
                      +  ..||-++++...+..+.+..|.++|.... .++..|+....+...+.||..+.|||.|
T Consensus       272 i--~~FgYhv~wLY~laF~~i~~GliiYs~re~~~~e~r~~~v~~~~~~~~~L~~eed~~~  330 (336)
T KOG2766|consen  272 I--RTFGYHVDWLYFLAFATIATGLIIYSTREKDEEELRKGQVVSEVRRPRKLLDEEDEQS  330 (336)
T ss_pred             H--HHHhcchhhhhHHHHHHHHHhhEEeeccccCcHhhccCccccccccCccccCcccccc
Confidence            7  78898899999999999999999994322 2222233333455555677776655543

>TIGR00688 rarD rarD protein

Probab=99.66  E-value=6.5e-14  Score=128.58  Aligned_cols=229  Identities=8%  Similarity=0.009  Sum_probs=151.0

Q ss_pred             HHHHHHHhhhhhccCCCChhhHHHHHHHHHHHHHH--HH--hcccC----C-C--CCCh-hHHHHHHHHHHHhhHHHHHh
Q 018776           36 YLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLI--YL--QGFTT----K-Q--MMNP-WKTYVKLSAVLMGSHGLTKG  103 (350)
Q Consensus        36 ~~~~~~~~e~i~~~~~f~~p~~lt~~q~~~~~~~~--~~--~~~~~----~-~--~~~~-~~~~~~ls~~~~~~~~l~~~  103 (350)
                      +...+...+.+ .  +. .|..+++.+++.+.++.  +.  ++.++    + +  ++.+ +......+++...+..+.++
T Consensus        14 wg~~~~~~k~~-~--~~-~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~   89 (256)
T TIGR00688        14 FGYMYYYSKLL-K--PL-PATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLIGFNWWLFIW   89 (256)
T ss_pred             HHHHHHHHHHh-c--cC-CHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHH
Confidence            34455555543 2  23 47888999988765332  22  22110    0 0  0111 11233445667788899999


Q ss_pred             hhhcCchhHHHHHhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHHhccCCCCCCCchHHHHHHHHHHHHHHH
Q 018776          104 SLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDS  183 (350)
Q Consensus       104 al~~~s~~~~~v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~~~~~~~~~~~~~G~~~~l~s~~~~a  183 (350)
                      |+++++.+.++++.++.|++++++++++  +|||+++++++++++.++|+++...++.    +..    .+++.++++++
T Consensus        90 a~~~~~~~~a~~l~~~~Pi~~~lla~~~--l~Ek~~~~~~l~~~~~~~Gv~li~~~~~----~~~----~~~l~aa~~~a  159 (256)
T TIGR00688        90 AVNNGSSLEVSLGYLINPLVMVALGRVF--LKERISRFQFIAVIIATLGVISNIVLKG----SLP----WEALVLAFSFT  159 (256)
T ss_pred             HHHcchHHHHHHHHHHHHHHHHHHHHHH--HhcCCCHHHHHHHHHHHHHHHHHHHHcC----Cch----HHHHHHHHHHH
Confidence            9999999999999999999999999999  9999999999999999999998765321    112    34677899999


Q ss_pred             hHHHHHHHHHhhCCCCChHhHHHHHHHhHHHHHHHHhhccchHHHHHHHHHhch-HHHHHHHHHHHHHHHHHHHHHHHHH
Q 018776          184 FLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHL-YVYGVLVFEAMATFIGQVSVLSLIA  262 (350)
Q Consensus       184 ~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~-~~~~~l~l~~~~~~l~~~~~~~~i~  262 (350)
                      .+.+..||..++    +..+...+ .....|...+.....+. .. ..  ..++ ..|..+++.++.+.+++.+++.+++
T Consensus       160 ~~~i~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~-~~-~~--~~~~~~~~~~l~~~g~~t~i~~~l~~~a~~  230 (256)
T TIGR00688       160 AYGLIRKALKNT----DLAGFCLE-TLSLMPVAIYYLLQTDF-AT-VQ--QTNPFPIWLLLVLAGLITGTPLLAFVIAAN  230 (256)
T ss_pred             HHHHHHhhcCCC----CcchHHHH-HHHHHHHHHHHHHHhcc-Cc-cc--ccCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999998875432    12222222 22233333221111111 00 00  0111 1344444444568899999999999


Q ss_pred             hhcHHHHHHHHhHHHHHHHHHHHHh
Q 018776          263 LFGAATTAMVTTARKAVTLLLSYLI  287 (350)
Q Consensus       263 ~~sa~t~sv~~~l~~v~~i~ls~~l  287 (350)
                      +.+|.+.++..+++|+++.+++.+.
T Consensus       231 ~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       231 RLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             cCChHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.65  E-value=1.1e-15  Score=141.57  Aligned_cols=219  Identities=11%  Similarity=0.168  Sum_probs=176.1

Q ss_pred             HHhhHHHHHhhhhcCchhHHHHHhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHHhccCCCC----CCCchH
Q 018776           94 LMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQT----SPNFSM  169 (350)
Q Consensus        94 ~~~~~~l~~~al~~~s~~~~~v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~~~~~~----~~~~~~  169 (350)
                      ...++.+.|.||.|++++..+++.+++-.||.+++.++  .+||+++.+.+++++.+.|++++..+|.++    .+....
T Consensus       169 WF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if--~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~~~l  246 (416)
T KOG2765|consen  169 WFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIF--PVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPASRPL  246 (416)
T ss_pred             HHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHc--CcchhhHHHHHHHHHhhccEEEEEeccccccccCCccchh
Confidence            45788899999999999999999999999999999999  689999999999999999999999987632    234569


Q ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHhhCC-CCChHhHHHHHHHhHHHHHHHHhhccchH-HHHHHHHHhchHHHHHHHHHH
Q 018776          170 IGVIMISGALIMDSFLGNLQEAIFTMNP-ETTQMEMLFCSTVVGLPMLIPPMLLTGEL-FKAWNSCSQHLYVYGVLVFEA  247 (350)
Q Consensus       170 ~G~~~~l~s~~~~a~~~v~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~g~~-~~~~~~~~~~~~~~~~l~l~~  247 (350)
                      .|.++++++++.+|.|.++.||-..+++ +.+.-.+..|..++.+.++.|.+++-.-. .+.++ .........+++.++
T Consensus       247 lG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~-lP~~~q~~~vv~~~l  325 (416)
T KOG2765|consen  247 LGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFE-LPSSTQFSLVVFNNL  325 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCccc-CCCCceeEeeeHhhH
Confidence            9999999999999999999988666653 44433344477777777777654321110 00000 011122333456678


Q ss_pred             HHHHHHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhccCC
Q 018776          248 MATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPAD  315 (350)
Q Consensus       248 ~~~~l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~~k~  315 (350)
                      +.++++-++|..+.-.++|++.++-.++..-.+++.-+++=|+++|+.+++|.+.+++|.+..++...
T Consensus       326 igtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~  393 (416)
T KOG2765|consen  326 IGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE  393 (416)
T ss_pred             HHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence            88889999999999999999999999999999999999999999999999999999999999888754

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.61  E-value=5.8e-13  Score=124.61  Aligned_cols=206  Identities=13%  Similarity=0.154  Sum_probs=154.7

Q ss_pred             HHHHhhHHHHHhhhhcCchhHHHHHhh-cchHHHHHHHHhhccCccccChhh----HHHHHHHHHHHHHHhccCCCCCC-
Q 018776           92 AVLMGSHGLTKGSLAFLNYPAQLMFKS-TKVLPVMVMGAFIPGLRRKYPAHE----YVSALLLVVGLILFTLADAQTSP-  165 (350)
Q Consensus        92 ~~~~~~~~l~~~al~~~s~~~~~v~ks-~~pi~v~il~~l~~~l~~r~~~~~----~~~v~l~~~Gv~l~~~~~~~~~~-  165 (350)
                      +.....+.+.+.|.+++++++...+-+ ..++.+.+.+.++  +|||.++++    +++++++++|+++....+.+... 
T Consensus        67 ~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~--f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~  144 (290)
T TIGR00776        67 AFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIV--FGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGI  144 (290)
T ss_pred             HHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHH--hhhccchHHHHHHHHHHHHHHHhHheEEecccccccc
Confidence            346677899999999999999977777 7788889999999  899999999    99999999999998765433211 


Q ss_pred             ---CchHHHHHHHHHHHHHHHhHHHHHHHHHhhCCCCChHhHHHHHH---Hh-HHHHHHHHhhccchHHHHHHHHHhchH
Q 018776          166 ---NFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCST---VV-GLPMLIPPMLLTGELFKAWNSCSQHLY  238 (350)
Q Consensus       166 ---~~~~~G~~~~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~---~~-~~~~~l~~~~~~g~~~~~~~~~~~~~~  238 (350)
                         .+...|+++.++|.++++.+.+..|+.  +   .++.+..+.+.   .+ +..+..+. ....+    +    ....
T Consensus       145 ~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~--~---~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~----~----~~~~  210 (290)
T TIGR00776       145 KSEFNFKKGILLLLMSTIGYLVYVVVAKAF--G---VDGLSVLLPQAIGMVIGGIIFNLGH-ILAKP----L----KKYA  210 (290)
T ss_pred             ccccchhhHHHHHHHHHHHHHHHHHHHHHc--C---CCcceehhHHHHHHHHHHHHHHHHH-hcccc----h----HHHH
Confidence               223689999999999999999988864  2   24555433222   22 22222211 00010    0    1112


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-hhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhh----hhHHHHHHHHHHHhcc
Q 018776          239 VYGVLVFEAMATFIGQVSVLSLIA-LFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHG----TGLLLIAMGITLKLLP  313 (350)
Q Consensus       239 ~~~~l~l~~~~~~l~~~~~~~~i~-~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~----iG~~lvl~Gv~ly~~~  313 (350)
                      .+..++ .++...+++.+++...+ +.++.+.++..+++|+.++++|++++||+.++.++    +|.++++.|+.+-...
T Consensus       211 ~~~~~~-~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~~  289 (290)
T TIGR00776       211 ILLNIL-PGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGIG  289 (290)
T ss_pred             HHHHHH-HHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhcc
Confidence            233333 44446788999989999 99999999999999999999999999999999999    9999999999987655


Q ss_pred             C
Q 018776          314 A  314 (350)
Q Consensus       314 k  314 (350)
                      |
T Consensus       290 ~  290 (290)
T TIGR00776       290 K  290 (290)
T ss_pred             C
Confidence            3

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.52  E-value=8.7e-12  Score=112.91  Aligned_cols=213  Identities=13%  Similarity=0.141  Sum_probs=155.1

Q ss_pred             HHHHHHhhHHHHHhhhhcCchhHHHHHhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHHhccCCCCCCCchH
Q 018776           90 LSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSM  169 (350)
Q Consensus        90 ls~~~~~~~~l~~~al~~~s~~~~~v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~~~~~~~~~~~~  169 (350)
                      -++....+....-+|.+.=..--+.+-....|++.++++.++  +|||+++.|++++++..+||..-.+..+    +.++
T Consensus        78 ~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lf--lkErls~~Q~iAV~lA~~GV~~~~~~~g----~lpw  151 (293)
T COG2962          78 TALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLF--LKERLSRLQWIAVGLAAAGVLIQTWLLG----SLPW  151 (293)
T ss_pred             HHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHH--HHhhccHHHHHHHHHHHHHHHHHHHHcC----CCcH
Confidence            344455566666777777555555667777899999999999  9999999999999999999998877653    4456


Q ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHhhCCCCChHhHHHHHHHhHHHHHHHHhhccchHHHHHHHHH-hchHHHHHHHHHHH
Q 018776          170 IGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCS-QHLYVYGVLVFEAM  248 (350)
Q Consensus       170 ~G~~~~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~-~~~~~~~~l~l~~~  248 (350)
                      ..+.++    +.+++|....|++ +    .++.+-+..-.++-+|..+..++..++-.+   +.. +++..+..+.+++.
T Consensus       152 val~la----~sf~~Ygl~RK~~-~----v~a~~g~~lE~l~l~p~al~yl~~l~~~~~---~~~~~~~~~~~LLv~aG~  219 (293)
T COG2962         152 VALALA----LSFGLYGLLRKKL-K----VDALTGLTLETLLLLPVALIYLLFLADSGQ---FLQQNANSLWLLLVLAGL  219 (293)
T ss_pred             HHHHHH----HHHHHHHHHHHhc-C----CchHHhHHHHHHHHhHHHHHHHHHHhcCch---hhhcCCchHHHHHHHhhH
Confidence            555443    4667788765543 1    234444433444444444333222111111   122 34445666667777


Q ss_pred             HHHHHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhccCCCCccc
Q 018776          249 ATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADDKPIK  320 (350)
Q Consensus       249 ~~~l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~~k~~~~~~  320 (350)
                      .|.+.-.++...-++.+=.+.++..+++|....+++++++||+++..+++..+++-.|+.+|+...-+++||
T Consensus       220 vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l~~~r~  291 (293)
T COG2962         220 VTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGLYTARK  291 (293)
T ss_pred             HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            788888888899999999999999999999999999999999999999999999999999999887655444

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.42  E-value=2.2e-10  Score=101.50  Aligned_cols=246  Identities=12%  Similarity=0.053  Sum_probs=173.2

Q ss_pred             hhHHHHHHHHHHHHHH--HHhcccCCCCCChhHHHHHHHHHHHhhHHHHHhhhhcCchhHHHHHhhcchHHHHHHHHhhc
Q 018776           55 GWYFTFIQGFVYLVLI--YLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIP  132 (350)
Q Consensus        55 p~~lt~~q~~~~~~~~--~~~~~~~~~~~~~~~~~~~ls~~~~~~~~l~~~al~~~s~~~~~v~ks~~pi~v~il~~l~~  132 (350)
                      +.-.|........++.  ..+-++++..+..|+.....+.+..+.|.+.|.|++.+|.++++.+..+.|+.+.+++    
T Consensus        40 ~~g~t~lRl~~aaLIll~l~RPwr~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~~----  115 (292)
T COG5006          40 AAGVTALRLAIAALILLALFRPWRRRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEFTGPLAVALLS----  115 (292)
T ss_pred             hhhHHHHHHHHHHHHHHHHhhHHHhccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccHHHHHHHh----
Confidence            4555666644433322  2232222223445666667788888999999999999999999999999999877653    


Q ss_pred             cCccccChhhHHHHHHHHHHHHHHhccCCCCCCCchHHHHHHHHHHHHHHHhHHHHHHHHHhhCCCCChHhHHHHHHHhH
Q 018776          133 GLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVG  212 (350)
Q Consensus       133 ~l~~r~~~~~~~~v~l~~~Gv~l~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~  212 (350)
                        -||  .++.+.+.+.+.|..+..-.+.+ ..+.+..|..+.+.+..|++.|-+..+|.-+..+   .-+-+.....++
T Consensus       116 --sRr--~~d~vwvaLAvlGi~lL~p~~~~-~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~---g~~g~a~gm~vA  187 (292)
T COG5006         116 --SRR--LRDFVWVALAVLGIWLLLPLGQS-VWSLDPVGVALALGAGACWALYIVLGQRAGRAEH---GTAGVAVGMLVA  187 (292)
T ss_pred             --ccc--hhhHHHHHHHHHHHHhheeccCC-cCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCC---CchHHHHHHHHH
Confidence              343  34555566777887776544322 1245799999999999999999999998875322   223333444555


Q ss_pred             HHHHHHHhhccchHHHHHHHHHhchHHH-HHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCC
Q 018776          213 LPMLIPPMLLTGELFKAWNSCSQHLYVY-GVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKP  291 (350)
Q Consensus       213 ~~~~l~~~~~~g~~~~~~~~~~~~~~~~-~~l~l~~~~~~l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~  291 (350)
                      ..+.+|+-....+ .   .  ..+|... .-+..+.+++++.|.+-...+++.++.+.++..+++|.++.+.|++++||+
T Consensus       188 aviv~Pig~~~ag-~---~--l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~  261 (292)
T COG5006         188 ALIVLPIGAAQAG-P---A--LFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGET  261 (292)
T ss_pred             HHHHhhhhhhhcc-h---h--hcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCC
Confidence            5555554221111 0   0  1234432 234566677778888889999999999999999999999999999999999


Q ss_pred             cchhhhhhHHHHHHHHHHHhccCCCCc
Q 018776          292 LTEQHGTGLLLIAMGITLKLLPADDKP  318 (350)
Q Consensus       292 ~t~~~~iG~~lvl~Gv~ly~~~k~~~~  318 (350)
                      +|+.||+|++.++.+..-.++.-+|+.
T Consensus       262 ls~~qwlaI~~ViaAsaG~~lt~~~~~  288 (292)
T COG5006         262 LTLIQWLAIAAVIAASAGSTLTARKPA  288 (292)
T ss_pred             CCHHHHHHHHHHHHHHhccccccCCCC
Confidence            999999999999999887776655444

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.37  E-value=6.8e-14  Score=124.28  Aligned_cols=214  Identities=13%  Similarity=0.139  Sum_probs=158.3

Q ss_pred             HHHHHHhhHHHHHhhhhcCchhHHHHHhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHHhcc-----CCCC-
Q 018776           90 LSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLA-----DAQT-  163 (350)
Q Consensus        90 ls~~~~~~~~l~~~al~~~s~~~~~v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~~-----~~~~-  163 (350)
                      .++....+..+.++|++|++.+-++++..++|++|.+++|.+  +||+++..+.++..+.+.||+++.-.     |... 
T Consensus       103 Rg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~--LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g  180 (346)
T KOG4510|consen  103 RGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAF--LKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEG  180 (346)
T ss_pred             ehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHH--HcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccc
Confidence            366666677889999999999999999999999999999999  99999999999999999999987532     2111 


Q ss_pred             --C--CCchHHHHHHHHHHHHHHHhHHHHHHHHHhhCCCCChHhHHHHHHHhHHHHHHHHhhccchHHHHHHHHHhch-H
Q 018776          164 --S--PNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHL-Y  238 (350)
Q Consensus       164 --~--~~~~~~G~~~~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~-~  238 (350)
                        +  .+.+..|....+.+++..|-..+..+++.|+.   +..-.+.|...++++..++.+..-|++    .  ..|. .
T Consensus       181 ~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~---h~~msvsyf~~i~lV~s~I~~~~ig~~----~--lP~cgk  251 (346)
T KOG4510|consen  181 EDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNA---HAIMSVSYFSLITLVVSLIGCASIGAV----Q--LPHCGK  251 (346)
T ss_pred             cccccccccCCchHHHHHhHhhhhhHHHHHHHhhccc---cEEEEehHHHHHHHHHHHHHHhhccce----e--cCcccc
Confidence              1  12356777777777777666666666665542   222234455566666655543322321    1  1111 1


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhccC
Q 018776          239 VYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPA  314 (350)
Q Consensus       239 ~~~~l~l~~~~~~l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~~k  314 (350)
                      -+..+...++.++++|++....++.=-|-..++..+..-+++.+.-+++|||..|++.|+|+++++....+....|
T Consensus       252 dr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~k  327 (346)
T KOG4510|consen  252 DRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKK  327 (346)
T ss_pred             ceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHH
Confidence            1222333356678999999999998888889999999999999999999999999999999999998888776544

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=98.97  E-value=3.5e-09  Score=85.43  Aligned_cols=123  Identities=11%  Similarity=0.162  Sum_probs=93.5

Q ss_pred             HHHhHHHHHHHHHhhCCCCChHhHHHHHHHhHHHHHHHHhhccchHHHHHHHHHhchH-HHHHHHHHHHHHHHHHHHHHH
Q 018776          181 MDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLY-VYGVLVFEAMATFIGQVSVLS  259 (350)
Q Consensus       181 ~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~-~~~~l~l~~~~~~l~~~~~~~  259 (350)
                      ++|.+.++.|+..++   .++.+..++....+.+ .++.....+...    ....++. ....+..+.+++.+++.+++.
T Consensus         2 ~~a~~~~~~k~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (126)
T PF00892_consen    2 SWAIYSVFSKKLLKK---ISPLSITFWRFLIAGI-LLILLLILGRKP----FKNLSPRQWLWLLFLGLLGTALAYLLYFY   73 (126)
T ss_pred             eeeeHHHHHHHHhcc---CCHHHHHHHHHHHHHH-HHHHHHhhcccc----ccCCChhhhhhhhHhhccceehHHHHHHH
Confidence            567788888887776   4678888888888776 444333222111    0111222 233445555656789999999


Q ss_pred             HHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHh
Q 018776          260 LIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKL  311 (350)
Q Consensus       260 ~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~  311 (350)
                      ++++.++...++...+.|+++.++++++++|+++..+++|+++++.|+.+..
T Consensus        74 a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   74 ALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999998764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.90  E-value=3.6e-09  Score=84.40  Aligned_cols=134  Identities=16%  Similarity=0.115  Sum_probs=101.7

Q ss_pred             HHHHHHHHHHHHhHHHHHHHHHhhCCCCChHhHHHHHHHhHHHHHHHHhhccchHHHHHHHHHhchHHHHHHHHHHHHHH
Q 018776          172 VIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATF  251 (350)
Q Consensus       172 ~~~~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~l~l~~~~~~  251 (350)
                      .+++++|+++.++..++.|--.++   .+|.-..+--+++...++...++..|+....-   .-++..|..+.++++.+.
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~~---vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~---~~~~k~~lflilSGla~g   78 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLEG---VDPDFATTIRTIVILIFLLIVLLVTGNWQAGG---EIGPKSWLFLILSGLAGG   78 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccc---cCccHHHHHHHHHHHHHHHHHHHhcCceeccc---ccCcceehhhhHHHHHHH
Confidence            457788999999999887754443   23433344444444444544455566532210   124456777888889998


Q ss_pred             HHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHh
Q 018776          252 IGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKL  311 (350)
Q Consensus       252 l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~  311 (350)
                      ++-+++|++++.-.+.....+.-..+++++++|++++||++|..+|+|++++.+|..+-+
T Consensus        79 lswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          79 LSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            999999999999999999999999999999999999999999999999999999987654

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.78  E-value=4.9e-07  Score=84.86  Aligned_cols=140  Identities=11%  Similarity=0.038  Sum_probs=106.7

Q ss_pred             chHHHHHHHHHHHHHHHhHHHHHHHHHhhCCCCChHhHHHHHHHhHHHHHHHHhhccchHHHHHHHHHhchHHHHHHHHH
Q 018776          167 FSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFE  246 (350)
Q Consensus       167 ~~~~G~~~~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~l~l~  246 (350)
                      ....|.++++++.++++...++.|.. .   +.++.+..++...++.+++++.....++..+.... ..++..+......
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~---~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~   79 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-Y---YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTL-IQTPQKIFMLAVS   79 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-c---CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHH-HcCHHHHHHHHHH
Confidence            45789999999999999999988643 2   25788999999999887776654433332211110 1122222223344


Q ss_pred             HHHHHHHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHh
Q 018776          247 AMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKL  311 (350)
Q Consensus       247 ~~~~~l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~  311 (350)
                      +++....+.++++.+++.++...++.....|+++.++++++++|+++..+++|+++.+.|+.+..
T Consensus        80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            55555677899999999999999999999999999999999999999999999999999998754

>TIGR00688 rarD rarD protein

Probab=98.70  E-value=9.4e-07  Score=81.04  Aligned_cols=137  Identities=7%  Similarity=0.057  Sum_probs=102.5

Q ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHhhCCCCChHhHHHHHHHhHHHHHHHHhhccchHHHHHHHHHh-ch-HHHHHHHHHH
Q 018776          170 IGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQ-HL-YVYGVLVFEA  247 (350)
Q Consensus       170 ~G~~~~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~-~~-~~~~~l~l~~  247 (350)
                      .|..++++++++++...+..|. ..+   .++.++.++-.+++.+++++.....++.......... +. +.+..+.+.+
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~~---~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   77 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LKP---LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCG   77 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hcc---CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHH
Confidence            3888999999999999999886 332   5789999999998887766543333322111111111 11 1222344444


Q ss_pred             HHHHHHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHH
Q 018776          248 MATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLK  310 (350)
Q Consensus       248 ~~~~l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly  310 (350)
                      +.....+.+++.+++++++.+.++.....|+++.+++.++++|+++..+++|+++.+.|+.+-
T Consensus        78 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li  140 (256)
T TIGR00688        78 LLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISN  140 (256)
T ss_pred             HHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence            555567788999999999999999999999999999999999999999999999999998754

This uncharacterized protein is predicted to have many membrane-spanning domains.

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=98.64  E-value=3.3e-07  Score=78.66  Aligned_cols=215  Identities=16%  Similarity=0.218  Sum_probs=143.0

Q ss_pred             HHHHHHHhhHHHHHhhhhcCchhHHHHHhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHHhccCCCCCCCch
Q 018776           89 KLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFS  168 (350)
Q Consensus        89 ~ls~~~~~~~~l~~~al~~~s~~~~~v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~~~~~~~~~~~  168 (350)
                      +.+++..+.++....|++.++.+.++-+-+|.-.||.+++++.  +|+|+...+++++++.+.|++++++.|...  .+.
T Consensus        58 PF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IV--L~D~~~~~kIlaailAI~GiVmiay~DN~~--a~e  133 (290)
T KOG4314|consen   58 PFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIV--LGDRFMGFKILAAILAIGGIVMIAYADNEH--ADE  133 (290)
T ss_pred             ceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHH--hccchhhhhHHHHHHHhCcEEEEEeccchh--hhh
Confidence            4455666788888999999999999999999999999999999  999999999999999999999999887642  457


Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHhhC--CCCCh-HhHHHHHHH--hHHHHHHHHhhccchHHHHHHHHHhchHHHHHH
Q 018776          169 MIGVIMISGALIMDSFLGNLQEAIFTMN--PETTQ-MEMLFCSTV--VGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVL  243 (350)
Q Consensus       169 ~~G~~~~l~s~~~~a~~~v~~~~l~~~~--~~~~~-~~~~~~~~~--~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~l  243 (350)
                      +.|+.++..|+++.++|-+..|+.....  ++... +..+.+.++  .+.|.++  +.++|  .+.++.....|  |.-+
T Consensus       134 ~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lI--L~~T~--VE~~qsFA~~P--WG~l  207 (290)
T KOG4314|consen  134 IIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALI--LAFTG--VEHLQSFAAAP--WGCL  207 (290)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHH--HHHhc--hHHHHHHhhCC--chhh
Confidence            9999999999999999999998876532  11111 111112221  1111111  11222  12222111122  3322


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhcc
Q 018776          244 VFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLP  313 (350)
Q Consensus       244 ~l~~~~~~l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~~  313 (350)
                      .-.+..+..-++.....+..+.|...|+-.....-.......++-+-.++.....|..++..|..+-...
T Consensus       208 ~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP  277 (290)
T KOG4314|consen  208 CGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIP  277 (290)
T ss_pred             hhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheecc
Confidence            2112222223345556666677777666555544444555555555677889999999999998876544

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=98.61  E-value=3e-07  Score=73.97  Aligned_cols=116  Identities=13%  Similarity=0.207  Sum_probs=85.8

Q ss_pred             HHHHHHhhhhhccCCCChhhHHHHHHHHHHHHHH--H-Hhccc--CCCCCChhHHHHHHHHH-HHhhHHHHHhhhhcCch
Q 018776           37 LVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLI--Y-LQGFT--TKQMMNPWKTYVKLSAV-LMGSHGLTKGSLAFLNY  110 (350)
Q Consensus        37 ~~~~~~~e~i~~~~~f~~p~~lt~~q~~~~~~~~--~-~~~~~--~~~~~~~~~~~~~ls~~-~~~~~~l~~~al~~~s~  110 (350)
                      ..+.+++++..++  ++ |...++.++..+.+..  . ....+  +..+...+......+.+ ...+..+.+.++++++.
T Consensus         4 a~~~~~~k~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~   80 (126)
T PF00892_consen    4 AIYSVFSKKLLKK--IS-PLSITFWRFLIAGILLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISA   80 (126)
T ss_pred             eeHHHHHHHHhcc--CC-HHHHHHHHHHHHHHHHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcch
Confidence            3556777777644  33 6777888877755311  1 12221  11222333444555665 46788899999999999


Q ss_pred             hHHHHHhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHHh
Q 018776          111 PAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFT  157 (350)
Q Consensus       111 ~~~~v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~  157 (350)
                      +..+++.++.|++++++++++  +||++++++++++++++.|+.++.
T Consensus        81 ~~~~~~~~~~pv~~~i~~~~~--~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   81 SIVSILQYLSPVFAAILGWLF--LGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             hHHHHHHHHHHHHHHHHHHHH--cCCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999  899999999999999999998864

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.60  E-value=2.2e-07  Score=74.46  Aligned_cols=79  Identities=14%  Similarity=0.241  Sum_probs=67.8

Q ss_pred             CChhHHHHHHHHHHH-hhHHHHHhhhhcCchhHHHHHhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHHhcc
Q 018776           81 MNPWKTYVKLSAVLM-GSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLA  159 (350)
Q Consensus        81 ~~~~~~~~~ls~~~~-~~~~l~~~al~~~s~~~~~v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~~  159 (350)
                      ++++......+++.. .++.+.++|+++.+ +....+.++.|++++++++++  +|||++++++.+++++++|++++.++
T Consensus        31 ~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~--~~er~~~~~~~a~~l~~~Gv~li~~~  107 (113)
T PF13536_consen   31 RKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLF--FKERLSPRRWLAILLILIGVILIAWS  107 (113)
T ss_pred             hCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhhh
Confidence            345555555566654 78889999999999 577799999999999999999  99999999999999999999999998


Q ss_pred             CCC
Q 018776          160 DAQ  162 (350)
Q Consensus       160 ~~~  162 (350)
                      |.+
T Consensus       108 ~~~  110 (113)
T PF13536_consen  108 DLT  110 (113)
T ss_pred             hcc
Confidence            754

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.58  E-value=1.7e-05  Score=72.52  Aligned_cols=204  Identities=14%  Similarity=0.155  Sum_probs=140.0

Q ss_pred             HHHHHHhhHHHHHhhhhcCchhHHH-HHhhcchHHHHHHHHhhccCccccChhhH----HHHHHHHHHHHHHhccCCCCC
Q 018776           90 LSAVLMGSHGLTKGSLAFLNYPAQL-MFKSTKVLPVMVMGAFIPGLRRKYPAHEY----VSALLLVVGLILFTLADAQTS  164 (350)
Q Consensus        90 ls~~~~~~~~l~~~al~~~s~~~~~-v~ks~~pi~v~il~~l~~~l~~r~~~~~~----~~v~l~~~Gv~l~~~~~~~~~  164 (350)
                      -+++.......++.|++++.++... +--....+.+.+.+.++  |+|--+..++    ++++++++|+.+.+..|.++.
T Consensus        51 sG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~--fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~  128 (269)
T PF06800_consen   51 SGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLF--FGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSD  128 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhh--cCCCCCcchHHHHHHHHHHHHHHHHHhcccccccc
Confidence            4566778899999999997765443 22234566788899999  8998887775    478899999999999887543


Q ss_pred             ----CCchHHHHHHHHHHHHHHHhHHHHHHHHHhhCCCCChHhHHHHHHHhHHHHHHH-HhhccchHHHHHHHHHhchHH
Q 018776          165 ----PNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIP-PMLLTGELFKAWNSCSQHLYV  239 (350)
Q Consensus       165 ----~~~~~~G~~~~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~g~~~~~~~~~~~~~~~  239 (350)
                          ..+...|+..++++.+.+..|.+..+- .    +.++++..+=++ ++..+... ..+...+.       ..+...
T Consensus       129 ~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~-~----~~~~~~~~lPqa-iGm~i~a~i~~~~~~~~-------~~~k~~  195 (269)
T PF06800_consen  129 KSSSKSNMKKGILALLISTIGYWIYSVIPKA-F----HVSGWSAFLPQA-IGMLIGAFIFNLFSKKP-------FFEKKS  195 (269)
T ss_pred             ccccccchhhHHHHHHHHHHHHHHHHHHHHh-c----CCChhHhHHHHH-HHHHHHHHHHhhccccc-------ccccch
Confidence                224577999999999999888887543 1    235555544322 22222111 11111110       001112


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchh----hhhhHHHHHHHHHH
Q 018776          240 YGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQ----HGTGLLLIAMGITL  309 (350)
Q Consensus       240 ~~~l~l~~~~~~l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~----~~iG~~lvl~Gv~l  309 (350)
                      |.-+ +.++.-.+++.+++...++.|..+.=..+.+..+++.+.|++++||+=+..    .++|.++++.|..+
T Consensus       196 ~~ni-l~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  196 WKNI-LTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             HHhh-HHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence            2222 234444589999999999999999999999999999999999999987754    56788888777654

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.56  E-value=7.1e-07  Score=83.73  Aligned_cols=215  Identities=14%  Similarity=0.148  Sum_probs=122.0

Q ss_pred             HHHHH-HHhhHHHHHhhhhcCchhHHHHHhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHHhccCCCCCCCc
Q 018776           89 KLSAV-LMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNF  167 (350)
Q Consensus        89 ~ls~~-~~~~~~l~~~al~~~s~~~~~v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~~~~~~~~~~  167 (350)
                      ..|+. +..+..+++.|+.+.|.+..+=+-+...++.++++..+  +|||++++++.|+.++++|..++....++..+..
T Consensus        54 ~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~--l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~  131 (300)
T PF05653_consen   54 WIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFF--LGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIH  131 (300)
T ss_pred             HHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHH--hcccchHhHHhhHHHHHhhheeeEEeCCCCCCcC
Confidence            44543 56777899999999999999988999999999999999  9999999999999999999987665443322111


Q ss_pred             ------------hHHHHHHHHHHHHHHHhHHHHHHHHHhhCCCCChHhHHHHH---HHhHHHHHHHHhhccchHHHHHH-
Q 018776          168 ------------SMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCS---TVVGLPMLIPPMLLTGELFKAWN-  231 (350)
Q Consensus       168 ------------~~~G~~~~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~g~~~~~~~-  231 (350)
                                  ....+........     ..+.-...+++++.+   ++.|.   ++++....+..=....-+.+... 
T Consensus       132 t~~~l~~~~~~~~fl~y~~~~~~~~-----~~L~~~~~~r~g~~~---i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g  203 (300)
T PF05653_consen  132 TLDELIALLSQPGFLVYFILVLVLI-----LILIFFIKPRYGRRN---ILVYISICSLIGSFTVLSAKAISILIKLTFSG  203 (300)
T ss_pred             CHHHHHHHhcCcceehhHHHHHHHH-----HHHHHhhcchhcccc---eEEEEEEeccccchhhhHHHHHHHHHHHHhcC
Confidence                        1111211111111     111111111221111   11121   11111111000000000000000 


Q ss_pred             -HHHhchHHHHHHHHHHHHHHHHH-HHHHHHHHhhcHHHHHHHH-hHHHHHHHHHHHHhcCC--Ccch----hhhhhHHH
Q 018776          232 -SCSQHLYVYGVLVFEAMATFIGQ-VSVLSLIALFGAATTAMVT-TARKAVTLLLSYLIFTK--PLTE----QHGTGLLL  302 (350)
Q Consensus       232 -~~~~~~~~~~~l~l~~~~~~l~~-~~~~~~i~~~sa~t~sv~~-~l~~v~~i~ls~~lfge--~~t~----~~~iG~~l  302 (350)
                       ....+|..|..++.... +.+.| ...+.+++++++.....+. ..-...+++.|.++|+|  +.++    ....|..+
T Consensus       204 ~~~f~~~~~y~l~~~~v~-~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~  282 (300)
T PF05653_consen  204 DNQFTYPLTYLLLLVLVV-TAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLI  282 (300)
T ss_pred             chhhhhhHHHHHHHHHHH-HHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHH
Confidence             01134444544444333 44566 4567899999987644433 33456788888999996  5555    45667888


Q ss_pred             HHHHHHHHhccC
Q 018776          303 IAMGITLKLLPA  314 (350)
Q Consensus       303 vl~Gv~ly~~~k  314 (350)
                      ++.|+++-+..|
T Consensus       283 ii~GV~lL~~~~  294 (300)
T PF05653_consen  283 IIIGVFLLSSSK  294 (300)
T ss_pred             HHHhhheeeccC
Confidence            888888865444

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.55  E-value=4.3e-06  Score=68.51  Aligned_cols=121  Identities=13%  Similarity=0.146  Sum_probs=87.7

Q ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHhhCCCCChHhHHHHHHHhHHHHHHHHhhccchHHHHHHHHHhchHHHHHHHHHHHH
Q 018776          170 IGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMA  249 (350)
Q Consensus       170 ~G~~~~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~l~l~~~~  249 (350)
                      .|+++++.+.++.+...++.|+=+++.++.+.   ... ..   ...    .           ...+|  +..++++.++
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~---~~~-~~---~~~----~-----------~~~~p--~~~i~lgl~~   57 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSH---AWD-FI---AAL----L-----------AFGLA--LRAVLLGLAG   57 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccc---hhH-HH---HHH----H-----------HHhcc--HHHHHHHHHH
Confidence            48889999999998888888876555332111   000 00   000    0           00122  1135566677


Q ss_pred             HHHHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHH--hcCCCcchhhhhhHHHHHHHHHHHhccC
Q 018776          250 TFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYL--IFTKPLTEQHGTGLLLIAMGITLKLLPA  314 (350)
Q Consensus       250 ~~l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~--lfge~~t~~~~iG~~lvl~Gv~ly~~~k  314 (350)
                      ..+++++|..++++.+...+..+.++..+...+.++.  +|||++|+.+++|++++++|+.+.+..+
T Consensus        58 ~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~  124 (129)
T PRK02971         58 YALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT  124 (129)
T ss_pred             HHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence            7789999999999999999999988888888888885  8999999999999999999999977543

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.44  E-value=3.7e-06  Score=78.23  Aligned_cols=133  Identities=12%  Similarity=0.144  Sum_probs=94.2

Q ss_pred             HHHHHHHHHHHHhHHHHHHHHHhhCCCCChHhHHHHHHHhHHHHHHHHhhccchHHHHHHHHHhchHHHHHHHHHHHHHH
Q 018776          172 VIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATF  251 (350)
Q Consensus       172 ~~~~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~l~l~~~~~~  251 (350)
                      +.+.+.++++++...+..||..+++   ++  ..++....+.+.++|........ ..+.  ....+.+..+.+.++...
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~---~~--~~~~~~~~~~~~l~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~   74 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKE---PD--FLWWALLAHSVLLTPYGLWYLAQ-VGWS--RLPATFWLLLAISAVANM   74 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCch---hH--HHHHHHHHHHHHHHHHHHHhccc-CCCC--CcchhhHHHHHHHHHHHH
Confidence            4567889999999999988765542   23  23455555555555543321100 0000  011123444555566666


Q ss_pred             HHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhc
Q 018776          252 IGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLL  312 (350)
Q Consensus       252 l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~  312 (350)
                      .++.+.+.+.++.++...+++....|+++.+++++++||+++..+++|+++++.|+.+-..
T Consensus        75 ~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~  135 (281)
T TIGR03340        75 VYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL  135 (281)
T ss_pred             HHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence            7778889999999999999999999999999999999999999999999999999987653

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.36  E-value=1.6e-05  Score=63.57  Aligned_cols=103  Identities=17%  Similarity=0.278  Sum_probs=73.7

Q ss_pred             hHHHHHHHHhhccchHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCC
Q 018776          211 VGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTK  290 (350)
Q Consensus       211 ~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~l~l~~~~~~l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge  290 (350)
                      ++.+..+......++..+......+++..+ .+..+.++...++..++...++.++ ..++...+.|+++.++|.++|+|
T Consensus         7 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~e   84 (113)
T PF13536_consen    7 FSVLFLLIILLIRGRLRDLFRALRRKPWLW-LILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKE   84 (113)
T ss_pred             HHHHHHHHHHHHHccHHHHHHHHHhCcHHH-HHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcC
Confidence            344444444444555544444333443333 2222333333677888899999995 77799999999999999999999


Q ss_pred             CcchhhhhhHHHHHHHHHHHhccCC
Q 018776          291 PLTEQHGTGLLLIAMGITLKLLPAD  315 (350)
Q Consensus       291 ~~t~~~~iG~~lvl~Gv~ly~~~k~  315 (350)
                      +++..+++|++++++|+.+-.+...
T Consensus        85 r~~~~~~~a~~l~~~Gv~li~~~~~  109 (113)
T PF13536_consen   85 RLSPRRWLAILLILIGVILIAWSDL  109 (113)
T ss_pred             CCCHHHHHHHHHHHHHHHHHhhhhc
Confidence            9999999999999999999887654

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.18  E-value=5.8e-05  Score=69.01  Aligned_cols=141  Identities=13%  Similarity=0.087  Sum_probs=109.1

Q ss_pred             hHHHHHHHHHHHHHHHhHHHHHHHHHhhCCCCChHhHHHHHHHhHHHHHHHHhhccchHHHHHHHHHhchHHHHHHHHHH
Q 018776          168 SMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEA  247 (350)
Q Consensus       168 ~~~G~~~~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~l~l~~  247 (350)
                      +..|+++.+.|-+.+++.-.|.|-+ +.   .++.|+..+-.+++.|+++..+...++..+.++ ...+|..+..+.+.+
T Consensus         5 ~~~Gil~~l~Ay~lwG~lp~y~kll-~~---~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~-~~~~p~~~~~~~l~a   79 (293)
T COG2962           5 SRKGILLALLAYLLWGLLPLYFKLL-EP---LPATEILAHRVIWSFPFMLALLFLLRQWRELKQ-LLKQPKTLLMLALTA   79 (293)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHH-cc---CCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH-HHhCcHHHHHHHHHH
Confidence            4579999999999999988887754 32   467899999999999988776655555555444 445666554444433


Q ss_pred             HHHHHHHH-HHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhccC
Q 018776          248 MATFIGQV-SVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPA  314 (350)
Q Consensus       248 ~~~~l~~~-~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~~k  314 (350)
                      .. ...|. .+.++..+-....+|.--.++|.+.+++|.++++|+++..|++..++..+|+..-.+..
T Consensus        80 ~l-i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~  146 (293)
T COG2962          80 LL-IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL  146 (293)
T ss_pred             HH-HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence            32 13454 44578888899999999999999999999999999999999999999999998876653

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.11  E-value=9.6e-05  Score=71.20  Aligned_cols=138  Identities=10%  Similarity=0.116  Sum_probs=97.0

Q ss_pred             HHHHHHHHHHHHhHHHHHHHHHhhCCCCChHhHHHHHHHhHHHHHHHHhhccchHHHHHHHHHhchHHHHHHHHHHHHHH
Q 018776          172 VIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATF  251 (350)
Q Consensus       172 ~~~~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~l~l~~~~~~  251 (350)
                      ++.+++.-++++...++.|..++.  ..++....+|-..++.+++++..+..+.. ..+.  ..+...+..+.+.++++.
T Consensus        15 ~~~~~~~q~~~~~~~~~~k~a~~~--G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~-~~~~--~~~~~~~~~l~l~g~~g~   89 (358)
T PLN00411         15 LTAMLATETSVVGISTLFKVATSK--GLNIYPFLGYSYLLASLLLLPSLFFTNRS-RSLP--PLSVSILSKIGLLGFLGS   89 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHC--CCCccHHHHHHHHHHHHHHHHHHHHHHHh-cccC--cchHHHHHHHHHHHHHHH
Confidence            344555667777778888877754  25677788888888877776654332110 0000  001112223333344444


Q ss_pred             HHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHh------cCCCcchhhhhhHHHHHHHHHHHhccC
Q 018776          252 IGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLI------FTKPLTEQHGTGLLLIAMGITLKLLPA  314 (350)
Q Consensus       252 l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~l------fge~~t~~~~iG~~lvl~Gv~ly~~~k  314 (350)
                      +.+.+.+..+++++|...+++.+..|+++.++++++      ++|+++..+++|+++.++|+.+-...+
T Consensus        90 ~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~  158 (358)
T PLN00411         90 MYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYH  158 (358)
T ss_pred             HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHcc
Confidence            555678899999999999999999999999999999      699999999999999999998866543

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.09  E-value=5.4e-05  Score=69.24  Aligned_cols=116  Identities=15%  Similarity=0.058  Sum_probs=85.2

Q ss_pred             HHHHHHHHHhhCCCCChHhHHHHHHHhHHHHHHHHhhccchHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 018776          185 LGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALF  264 (350)
Q Consensus       185 ~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~l~l~~~~~~l~~~~~~~~i~~~  264 (350)
                      ..+..|...++.  .++.+..++-.+.+.+++.+.....   .       ...+....+..+.++..+.+.+++.++++.
T Consensus         4 ~~~~~k~~~~~~--~~~~~~~~~r~~~~~l~l~~~~~~~---~-------~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~   71 (260)
T TIGR00950         4 TGVVIGQYLEGQ--VPLYFAVFRRLIFALLLLLPLLRRR---P-------PLKRLLRLLLLGALQIGVFYVLYFVAVKRL   71 (260)
T ss_pred             hHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHHHhc---c-------CHhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            344555544432  4677788877777766655532221   0       011122334555556567778899999999


Q ss_pred             cHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhc
Q 018776          265 GAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLL  312 (350)
Q Consensus       265 sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~  312 (350)
                      ++...+++..+.|+++.+++.++++|+++..+++|+.+.+.|+.+...
T Consensus        72 ~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~  119 (260)
T TIGR00950        72 PVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLS  119 (260)
T ss_pred             ChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhcc
Confidence            999999999999999999999999999999999999999999988653

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.96  E-value=4.7e-05  Score=60.75  Aligned_cols=65  Identities=11%  Similarity=0.043  Sum_probs=59.0

Q ss_pred             HHHHhhHHHHHhhhhcCchhHHHHHhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHHhc
Q 018776           92 AVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTL  158 (350)
Q Consensus        92 ~~~~~~~~l~~~al~~~s~~~~~v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~  158 (350)
                      .++..+..+...+++.+|.+.+-.+-+..++.+++.++++  +|||+++++++++.++++|+++.+.
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~--f~E~ls~~~~~Gi~lii~Gv~~i~~  109 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKL--WHEPVSPRHWCGVAFIIGGIVILGS  109 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            3466788899999999999998888889999999999999  9999999999999999999998764

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=97.92  E-value=0.00028  Score=59.06  Aligned_cols=66  Identities=9%  Similarity=0.137  Sum_probs=60.3

Q ss_pred             HHHHHHhhHHHHHhhhhcCchhHHHHHhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHHh
Q 018776           90 LSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFT  157 (350)
Q Consensus        90 ls~~~~~~~~l~~~al~~~s~~~~~v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~  157 (350)
                      .+++....+...+..+++++.-+++++...+.+.+.++++++  ++|+++..++.|+++.++|+.+.+
T Consensus        87 ~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~--f~~~~t~~~~~G~~l~~~G~~~Ys  152 (153)
T PF03151_consen   87 SGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIF--FGEPITPLQIIGIVLALVGVLLYS  152 (153)
T ss_pred             HHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhh--cCCcCCHHHHHHHHHHHHHHheee
Confidence            355566888899999999999999999999999999999999  899999999999999999998754

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=97.90  E-value=0.00035  Score=65.66  Aligned_cols=128  Identities=14%  Similarity=0.122  Sum_probs=87.8

Q ss_pred             HHHHHHHhHHHHHHHHHhhCCCCChHhHHHHHHHhHHHHHHHHhhccchHHHHHHHHHhchHHHHHHHHHHHHHHHHHHH
Q 018776          177 GALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVS  256 (350)
Q Consensus       177 ~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~l~l~~~~~~l~~~~  256 (350)
                      ..-+++...++++|..+++.  ..|..+.+....++.....+. ...+.. +..   ....+.+..+...+++..+.+.+
T Consensus         9 ~w~~~~~~~~~~NK~~l~~~--~~P~~~~~~~~~~~~~~~~~~-~~~~~~-~~~---~~~~~~~~~~~~~g~~~~~~~~~   81 (302)
T TIGR00817         9 LWYFLNVYFNIYNKKLLNVF--PYPYFKTLISLAVGSLYCLLS-WSSGLP-KRL---KISSALLKLLLPVAIVHTIGHVT   81 (302)
T ss_pred             HHHHHHHHHHHHHHHHHhhC--ChhHHHHHHHHHHHHHHHHHH-HHhCCC-CCC---CCCHHHHHHHHHHHHHHHHHHHH
Confidence            34445555667888887753  346777766665554443322 101100 000   00112333344444555667778


Q ss_pred             HHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHh
Q 018776          257 VLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKL  311 (350)
Q Consensus       257 ~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~  311 (350)
                      .+.+++++++...+++..+.|+++.+++.++++|+++..+++|++++++|+.+..
T Consensus        82 ~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~  136 (302)
T TIGR00817        82 SNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS  136 (302)
T ss_pred             HHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc
Confidence            8999999999999999999999999999999999999999999999999998754

specificities overlap.

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=97.85  E-value=0.00047  Score=64.49  Aligned_cols=128  Identities=16%  Similarity=0.051  Sum_probs=89.6

Q ss_pred             HHHHHHHHHHhHHHHHHHHHhhCCCCChHhHHHHHHHhHHHHHHHHhhccchHHHHHHHHHhchHHHH-HHHHHHHHHHH
Q 018776          174 MISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYG-VLVFEAMATFI  252 (350)
Q Consensus       174 ~~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~-~l~l~~~~~~l  252 (350)
                      ..++-.+++|...+..|...++   .+|.+..++-..++.+++++.....+....       ....+. .+..+.+....
T Consensus        12 ~~~~~~~iWg~~~~~~K~~~~~---~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~-------~~~~~~~~~~~g~~~~~~   81 (292)
T PRK11272         12 ALFALYIIWGSTYLVIRIGVES---WPPLMMAGVRFLIAGILLLAFLLLRGHPLP-------TLRQWLNAALIGLLLLAV   81 (292)
T ss_pred             HHHHHHHHHhhHHHHHHHHhcc---CCHHHHHHHHHHHHHHHHHHHHHHhCCCCC-------cHHHHHHHHHHHHHHHHH
Confidence            3455677788888887755442   578889888888887776665433221100       111122 22333333334


Q ss_pred             HHHHHHHHH-HhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhc
Q 018776          253 GQVSVLSLI-ALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLL  312 (350)
Q Consensus       253 ~~~~~~~~i-~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~  312 (350)
                      ++.+.+... ++.++...++...+.|+++.+++.+ ++|+++..+++|+++.+.|+.+-..
T Consensus        82 ~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~  141 (292)
T PRK11272         82 GNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNS  141 (292)
T ss_pred             HHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhc
Confidence            556666777 8899999999999999999999985 7999999999999999999988654

>COG2510 Predicted membrane protein [Function unknown]

Probab=97.83  E-value=0.00022  Score=57.34  Aligned_cols=103  Identities=18%  Similarity=0.172  Sum_probs=74.6

Q ss_pred             hhhHHHHHHHHHHHHHH----HHhcccCCC--CCChhHHHHHHHH-HHHhhHHHHHhhhhcCchhHHHHHhhcchHHHHH
Q 018776           54 YGWYFTFIQGFVYLVLI----YLQGFTTKQ--MMNPWKTYVKLSA-VLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMV  126 (350)
Q Consensus        54 ~p~~lt~~q~~~~~~~~----~~~~~~~~~--~~~~~~~~~~ls~-~~~~~~~l~~~al~~~s~~~~~v~ks~~pi~v~i  126 (350)
                      -|.+-|++..++...++    ...+..+..  ...+-+.|+.+|. ....+..+.+.|++-=++|-..=+..++|+++.+
T Consensus        30 dp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf~ALk~G~as~VvPldk~svvl~~l  109 (140)
T COG2510          30 DPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVL  109 (140)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHH
Confidence            36777777766644332    222332221  1112234555654 4567888999999998887777778899999999


Q ss_pred             HHHhhccCccccChhhHHHHHHHHHHHHHHhc
Q 018776          127 MGAFIPGLRRKYPAHEYVSALLLVVGLILFTL  158 (350)
Q Consensus       127 l~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~  158 (350)
                      +++++  +|||++..+|++++++++|+++++.
T Consensus       110 ls~lf--L~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510         110 LSILF--LGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHH--hcCCCCHHHHHHHHHHHhCeeeEec
Confidence            99999  9999999999999999999987653

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.81  E-value=0.00049  Score=64.77  Aligned_cols=131  Identities=15%  Similarity=0.163  Sum_probs=90.7

Q ss_pred             hHHHHHHHHHhhCCCC-ChHhHHHHHHHhHHHHHHHHhhccchHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018776          184 FLGNLQEAIFTMNPET-TQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIA  262 (350)
Q Consensus       184 ~~~v~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~l~l~~~~~~l~~~~~~~~i~  262 (350)
                      .++++||++.++.... .+.-+.+.+....+....+.....+.     ......|  +......+++..++..+.+.+++
T Consensus        14 ~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~-----~~~~~~~--~~~~~~~~~~~~~~~~~~~~al~   86 (303)
T PF08449_consen   14 SYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKF-----PKSRKIP--LKKYAILSFLFFLASVLSNAALK   86 (303)
T ss_pred             HHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccc-----cCCCcCh--HHHHHHHHHHHHHHHHHHHHHHH
Confidence            4568899998875433 34445555554444443332222220     0001111  22222234555677788889999


Q ss_pred             hhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhccCCCCcccc
Q 018776          263 LFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADDKPIKR  321 (350)
Q Consensus       263 ~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~~k~~~~~~~  321 (350)
                      +.+-.+..+.-..+++.+.++|++++|++.+..++++.+++.+|+.+..+.+.+.++..
T Consensus        87 ~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~  145 (303)
T PF08449_consen   87 YISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSS  145 (303)
T ss_pred             hCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccccc
Confidence            99999999999999999999999999999999999999999999999998876554433

; GO: 0055085 transmembrane transport

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=97.80  E-value=0.00066  Score=65.31  Aligned_cols=140  Identities=15%  Similarity=0.073  Sum_probs=96.2

Q ss_pred             hHHHHHHHHHHHHHHHhHHHHHHHHHhhCCCCChHhHHHHHHHhHHHHHHHHhhccchHHHHHHHHHhchHHHHHHHHHH
Q 018776          168 SMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEA  247 (350)
Q Consensus       168 ~~~G~~~~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~l~l~~  247 (350)
                      ++.-..+.+..-.++..+++++|.+++..+  -|+.+..+..+++..+..+... .+- .+.... ......+..++..+
T Consensus        47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~~~--~P~~l~~~~~~~~~l~~~~~~~-~~~-~~~~~~-~~~~~~~~~llp~g  121 (350)
T PTZ00343         47 KWKLALLFLTWYALNVLYVVDNKLALNMLP--LPWTISSLQLFVGWLFALLYWA-TGF-RKIPRI-KSLKLFLKNFLPQG  121 (350)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--hhHHHHHHHHHHHHHHHHHHHH-hCC-CCCCCC-CCHHHHHHHHHHHH
Confidence            444445555666677777888998887642  2777777777666554333221 110 000000 00011233344445


Q ss_pred             HHHHHHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhc
Q 018776          248 MATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLL  312 (350)
Q Consensus       248 ~~~~l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~  312 (350)
                      +++..++...+.+++..++..++++..+.|+++++++.++++|+++..+++|++++++|+.+-..
T Consensus       122 l~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~  186 (350)
T PTZ00343        122 LCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASV  186 (350)
T ss_pred             HHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheec
Confidence            56656666677899999999999999999999999999999999999999999999999998654

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.78  E-value=0.00026  Score=56.45  Aligned_cols=62  Identities=15%  Similarity=0.127  Sum_probs=55.9

Q ss_pred             HHHHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHh
Q 018776          250 TFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKL  311 (350)
Q Consensus       250 ~~l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~  311 (350)
                      -.++++++..++++.+...+.....+.++.+.++|+++|||++|+.+++|+++++.|+.+-.
T Consensus        47 ~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         47 LGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            34577788899999999998888889999999999999999999999999999999997754

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=97.74  E-value=9.6e-05  Score=68.37  Aligned_cols=219  Identities=14%  Similarity=0.119  Sum_probs=126.2

Q ss_pred             HHHHH-HHhhHHHHHhhhhcCchhHHHHHhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHHhccCCCCCC--
Q 018776           89 KLSAV-LMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSP--  165 (350)
Q Consensus        89 ~ls~~-~~~~~~l~~~al~~~s~~~~~v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~~~~~~~~--  165 (350)
                      ..|.+ +..+-..++.|+.|.|.+..+=+-+.+.+..++++..+  ++||+++...++.+++++|-.+.....++...  
T Consensus        68 w~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~--L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~  145 (335)
T KOG2922|consen   68 WAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFF--LKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIE  145 (335)
T ss_pred             HHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHH--HHHHHHHhhhhheeEEecccEEEEEecCcccccc
Confidence            34543 66788899999999999988888889999999999999  99999999999999999998877666543321  


Q ss_pred             ----------CchHHHHHHHHHHHHHHHhHHHHHHHHHhhCCCCChHhHHHHHHHhHHHHHHHHhh--ccchHH-HHHH-
Q 018776          166 ----------NFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPML--LTGELF-KAWN-  231 (350)
Q Consensus       166 ----------~~~~~G~~~~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~g~~~-~~~~-  231 (350)
                                +.....+.....-.++     +..-....+++.   ..++.|..+.++.-.+-.+-  .-|... ...+ 
T Consensus       146 t~~el~~~~~~~~Fliy~~~iil~~~-----il~~~~~p~~g~---tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g  217 (335)
T KOG2922|consen  146 SVEEVWELATEPGFLVYVIIIILIVL-----ILIFFYAPRYGQ---TNILVYIGICSLIGSLTVMSVKALGIAIKLTFSG  217 (335)
T ss_pred             cHHHHHHHhcCccHHHHHHHHHHHHH-----HHheeecccccc---cceeehhhHhhhhcceeeeeHHHHHHHHHHHhcC
Confidence                      1111222111111111     000001112221   12334544433321110000  001111 1100 


Q ss_pred             -HHHhchHHHHHHHHHHHHHHHHHH-HHHHHHHhhcHHHHHHHHhH-HHHHHHHHHHHhcCC--Ccch----hhhhhHHH
Q 018776          232 -SCSQHLYVYGVLVFEAMATFIGQV-SVLSLIALFGAATTAMVTTA-RKAVTLLLSYLIFTK--PLTE----QHGTGLLL  302 (350)
Q Consensus       232 -~~~~~~~~~~~l~l~~~~~~l~~~-~~~~~i~~~sa~t~sv~~~l-~~v~~i~ls~~lfge--~~t~----~~~iG~~l  302 (350)
                       ....+|..|..++....| ..-|. ..+.+++.+++...+.+.++ -..++++.|.++|+|  ..+.    ....|...
T Consensus       218 ~~ql~~~~ty~~~l~~~~~-~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~t  296 (335)
T KOG2922|consen  218 NNQLFYPLTWIFLLVVATC-VSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVT  296 (335)
T ss_pred             CcccccHHHHHHHHHHHHH-HHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHH
Confidence             001234444433333333 23443 45788998888876666554 567888899999985  4444    45678888


Q ss_pred             HHHHHHHHhccCCCCc
Q 018776          303 IAMGITLKLLPADDKP  318 (350)
Q Consensus       303 vl~Gv~ly~~~k~~~~  318 (350)
                      ++.|+++-...|..+.
T Consensus       297 i~~G~flL~~~kd~~~  312 (335)
T KOG2922|consen  297 IFLGIFLLHRTKDMEI  312 (335)
T ss_pred             hhheeeEeeeeccccc
Confidence            8889888755544433

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=97.73  E-value=0.0013  Score=61.66  Aligned_cols=124  Identities=12%  Similarity=0.075  Sum_probs=86.0

Q ss_pred             HHHHHHHHHHHhHHHHHHHHHhhCCCCChHhHHHHHHHhHHHHHHHHhhccchHHHHHHHHHhchHHHHHHHHHHHHHHH
Q 018776          173 IMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFI  252 (350)
Q Consensus       173 ~~~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~l~l~~~~~~l  252 (350)
                      ++.+++.++++...+..|...++   .+|.+..++-..++.+.+++......           .+  +..+...++....
T Consensus         7 l~~l~~~~~Wg~~~~~~k~~~~~---~~p~~~~~~R~~~a~~~l~~~~~~~~-----------~~--~~~~~~~g~~~~~   70 (299)
T PRK11453          7 VLALLVVVVWGLNFVVIKVGLHN---MPPLMLAGLRFMLVAFPAIFFVARPK-----------VP--LNLLLGYGLTISF   70 (299)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHhc---CCHHHHHHHHHHHHHHHHHHHhcCCC-----------Cc--hHHHHHHHHHHHH
Confidence            44677889999999988866543   57888888877765544443221111           00  1112222222223


Q ss_pred             HH-HHHHHHHHh-hcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhc
Q 018776          253 GQ-VSVLSLIAL-FGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLL  312 (350)
Q Consensus       253 ~~-~~~~~~i~~-~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~  312 (350)
                      ++ .+++...++ .++...+++....|+++.++++++++|+++..+++|.++.+.|+.+-..
T Consensus        71 ~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~  132 (299)
T PRK11453         71 GQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIE  132 (299)
T ss_pred             HHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhcc
Confidence            33 345666776 5778889899999999999999999999999999999999999887653

>PRK11689 aromatic amino acid exporter; Provisional

Probab=97.71  E-value=0.00088  Score=62.80  Aligned_cols=130  Identities=15%  Similarity=0.019  Sum_probs=88.0

Q ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHhhCCCCChHhHHHHHHHhHHHHHHHHhhccchHHHHHHHHHhchHHHHHHHHHHHH
Q 018776          170 IGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMA  249 (350)
Q Consensus       170 ~G~~~~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~l~l~~~~  249 (350)
                      .++++++.++++++...+..|...+.   .+|....++-..++.+++++..  ..  +. .   ..+  .+..+.++++.
T Consensus         4 ~~~l~~l~a~~~Wg~~~~~~k~~~~~---~~P~~~~~~R~~~a~l~l~~~~--~~--~~-~---~~~--~~~~~~~~~l~   70 (295)
T PRK11689          4 KATLIGLIAILLWSTMVGLIRGVSES---LGPVGGAAMIYSVSGLLLLLTV--GF--PR-L---RQF--PKRYLLAGGLL   70 (295)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHcc---CChHHHHHHHHHHHHHHHHHHc--cc--cc-c---ccc--cHHHHHHHhHH
Confidence            35667888999999998888865554   4677777777666666655431  10  11 0   111  11122333332


Q ss_pred             HHHHHHHHHHHHH----hhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhc
Q 018776          250 TFIGQVSVLSLIA----LFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLL  312 (350)
Q Consensus       250 ~~l~~~~~~~~i~----~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~  312 (350)
                      ....+.+.+..++    ..++...+++..+.|+++.++++++++|+++..+++|+++.+.|+.+-..
T Consensus        71 ~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~  137 (295)
T PRK11689         71 FVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLG  137 (295)
T ss_pred             HHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheec
Confidence            2233334444443    46778889999999999999999999999999999999999999987653

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=97.57  E-value=0.0029  Score=59.18  Aligned_cols=70  Identities=13%  Similarity=0.012  Sum_probs=61.7

Q ss_pred             HHHHH-HHhhHHHHHhhhhcCchhHHHHHhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHHhccC
Q 018776           89 KLSAV-LMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLAD  160 (350)
Q Consensus        89 ~ls~~-~~~~~~l~~~al~~~s~~~~~v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~~~  160 (350)
                      .++++ ..+...+.|+++++++.+...++-...|++..++++++  ++|++++.++++.+++++|++......
T Consensus       213 ~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~--lgE~~~~~~~iG~~lIl~~~~~~~~~~  283 (293)
T PRK10532        213 AVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIF--LGETLTLIQWLALGAIIAASMGSTLTI  283 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHH--hCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence            34544 44677788999999999999999999999999999999  999999999999999999999886554

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=97.46  E-value=0.0063  Score=55.89  Aligned_cols=143  Identities=13%  Similarity=0.087  Sum_probs=94.3

Q ss_pred             hHHHHHHHHHHHHHHHhHHHHHHHHHhhCCCCChHhHHHHHHHhHHHHHHHHhhccchHHHHHHHHHhchHHHHHHHHHH
Q 018776          168 SMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEA  247 (350)
Q Consensus       168 ~~~G~~~~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~l~l~~  247 (350)
                      ...+....+...+.++......+.....  ..+.....++....+.+..++......  ...   .......+..+....
T Consensus         5 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~   77 (292)
T COG0697           5 LLLGLLALLLWGLLWGLSFIALKLAVES--LDPFLFAAALRFLIAALLLLPLLLLEP--RGL---RPALRPWLLLLLLAL   77 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcc--cCChHHHHHHHHHHHHHHHHHHHHhhc--ccc---cccccchHHHHHHHH
Confidence            4556666677777777777776655443  123444444444444443222111100  000   011111223344455


Q ss_pred             HHHHHHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHH-HhcCCCcchhhhhhHHHHHHHHHHHhccCCCC
Q 018776          248 MATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSY-LIFTKPLTEQHGTGLLLIAMGITLKLLPADDK  317 (350)
Q Consensus       248 ~~~~l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~-~lfge~~t~~~~iG~~lvl~Gv~ly~~~k~~~  317 (350)
                      +....++..++..+++.++...++.....|+++.+++. ++++|+++..+++|..+.+.|+.+-.......
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~  148 (292)
T COG0697          78 LGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGG  148 (292)
T ss_pred             HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcc
Confidence            56667778889999999999999999999999999996 77799999999999999999999988765543

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.46  E-value=0.0036  Score=59.69  Aligned_cols=142  Identities=14%  Similarity=0.065  Sum_probs=91.5

Q ss_pred             chHHHHHHHHHHHHHHHhHHHHHHHHHhhCCCCChHhHHHHHHHhHHH--HHHH---HhhccchHHHHHHHHH-hchHHH
Q 018776          167 FSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLP--MLIP---PMLLTGELFKAWNSCS-QHLYVY  240 (350)
Q Consensus       167 ~~~~G~~~~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~l~---~~~~~g~~~~~~~~~~-~~~~~~  240 (350)
                      +...|+++.+++.+|++-..+-+|| .++.    .+|.. |. ..+..  ++.|   ..+..+++.+   ... .++..+
T Consensus         4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~w----~wE~~-W~-v~gi~~wl~~~~~~g~~~~~~f~~---~~~~~~~~~~   73 (345)
T PRK13499          4 AIILGIIWHLIGGASSGSFYAPFKK-VKKW----SWETM-WS-VGGIFSWLILPWLIAALLLPDFWA---YYSSFSGSTL   73 (345)
T ss_pred             hhHHHHHHHHHHHHHhhcccccccc-cCCC----chhHH-HH-HHHHHHHHHHHHHHHHHHhhhHHH---HHHhcCHHHH
Confidence            4578999999999999998888877 3332    24444 32 11111  1112   1122223222   222 344444


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcHHHH-HHHHhHHHHHHHHHHHHhcCCCc---c----hhhhhhHHHHHHHHHHHhc
Q 018776          241 GVLVFEAMATFIGQVSVLSLIALFGAATT-AMVTTARKAVTLLLSYLIFTKPL---T----EQHGTGLLLIAMGITLKLL  312 (350)
Q Consensus       241 ~~l~l~~~~~~l~~~~~~~~i~~~sa~t~-sv~~~l~~v~~i~ls~~lfge~~---t----~~~~iG~~lvl~Gv~ly~~  312 (350)
                      ..-+++++.-.++|+.++..+++.|-... .+..-+.-+.+.+.+.+++||--   +    ....+|+++++.|+.+..+
T Consensus        74 ~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~  153 (345)
T PRK13499         74 LPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGR  153 (345)
T ss_pred             HHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence            44455566666899999999999997654 44455667788888999998522   2    3578899999999999998


Q ss_pred             cCCCCc
Q 018776          313 PADDKP  318 (350)
Q Consensus       313 ~k~~~~  318 (350)
                      ...++.
T Consensus       154 Ag~~k~  159 (345)
T PRK13499        154 AGQLKE  159 (345)
T ss_pred             hhhhcc
Confidence            655443

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.45  E-value=0.0022  Score=60.08  Aligned_cols=132  Identities=15%  Similarity=0.111  Sum_probs=88.4

Q ss_pred             HHHHHHHHHHHHHhHHHHHHHHHhhCCCCChHhHHHHHHHhHHHHHHHHhhccchHHHHHHHHHhchHHHHHHHHHHHHH
Q 018776          171 GVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMAT  250 (350)
Q Consensus       171 G~~~~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~l~l~~~~~  250 (350)
                      |++++++++++++...+..|++.   + .++.+.+ . ..++..+.........+. .     ...+..+..-.++++.-
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~---g-~~~~~~~-~-~~~g~l~~~~~~~~~~~~-~-----~~~~~~~~~g~l~G~~w   69 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG---G-GPYSQTL-G-TTFGALILSIAIAIFVLP-E-----FWALSIFLVGLLSGAFW   69 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC---C-CHHHHHH-H-HHHHHHHHHHHHHHHhCC-c-----ccccHHHHHHHHHHHHH
Confidence            57788999999999999888754   1 2333333 1 222322222111111110 0     01122332223333444


Q ss_pred             HHHHHHHHHHHHhhcHHHHHHHHh-HHHHHHHHHHHHhcCCCcchhh----hhhHHHHHHHHHHHhccC
Q 018776          251 FIGQVSVLSLIALFGAATTAMVTT-ARKAVTLLLSYLIFTKPLTEQH----GTGLLLIAMGITLKLLPA  314 (350)
Q Consensus       251 ~l~~~~~~~~i~~~sa~t~sv~~~-l~~v~~i~ls~~lfge~~t~~~----~iG~~lvl~Gv~ly~~~k  314 (350)
                      ..+|++++.++++.|....-.+.+ +.+++..+.|.++|||..+..+    ++|+++++.|+.+....+
T Consensus        70 ~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~  138 (290)
T TIGR00776        70 ALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSK  138 (290)
T ss_pred             HhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecc
Confidence            578999999999999999877777 7788999999999999999999    999999999999875553

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.41  E-value=0.0017  Score=59.26  Aligned_cols=71  Identities=17%  Similarity=0.288  Sum_probs=64.1

Q ss_pred             HHHHHHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhccCCCCc
Q 018776          248 MATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADDKP  318 (350)
Q Consensus       248 ~~~~l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~~k~~~~  318 (350)
                      ++-.+.+...+.++++.+|.+..+....|.+++.++++++++++++..||+++.+.+.|+.+........+
T Consensus        25 ~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~~   95 (244)
T PF04142_consen   25 LLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQSS   95 (244)
T ss_pred             HHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcccc
Confidence            33456778899999999999999999999999999999999999999999999999999999888765543

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.40  E-value=0.0015  Score=52.63  Aligned_cols=64  Identities=17%  Similarity=0.143  Sum_probs=53.3

Q ss_pred             HHHHHHHHHHHHhhcHHH-HHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhccC
Q 018776          251 FIGQVSVLSLIALFGAAT-TAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPA  314 (350)
Q Consensus       251 ~l~~~~~~~~i~~~sa~t-~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~~k  314 (350)
                      .++++++..++++.+-.. +++..-+.-+.+.+.|+++|||++|+.+++|+.+++.|+..-....
T Consensus        41 ~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         41 SLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            456677778888877654 6666778889999999999999999999999999999998875544

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.38  E-value=0.001  Score=54.43  Aligned_cols=72  Identities=14%  Similarity=0.103  Sum_probs=59.9

Q ss_pred             HHHHHH-HHHhhHHHHHhhhhcCchhHHHHHhhcchHHHHHHHHh--hccCccccChhhHHHHHHHHHHHHHHhccC
Q 018776           87 YVKLSA-VLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAF--IPGLRRKYPAHEYVSALLLVVGLILFTLAD  160 (350)
Q Consensus        87 ~~~ls~-~~~~~~~l~~~al~~~s~~~~~v~ks~~pi~v~il~~l--~~~l~~r~~~~~~~~v~l~~~Gv~l~~~~~  160 (350)
                      +..+++ ++.++..+.+.+++.+|.+.+.-+-+..++.+.+.++.  +  ++|+.+++++++++++++|+.++..++
T Consensus        50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~--~~E~ls~~~~iGi~lIi~GV~lv~~~~  124 (129)
T PRK02971         50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPW--FNETFSLKKTLGVACIMLGVWLINLPT  124 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHH--cCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence            444555 47788999999999999998877777777777777774  6  799999999999999999999987654

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.26  E-value=0.0019  Score=52.07  Aligned_cols=72  Identities=8%  Similarity=0.166  Sum_probs=61.3

Q ss_pred             HHHHHHHHHhhHHHHHhhhhcCchhH-HHHHhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHHhccC
Q 018776           87 YVKLSAVLMGSHGLTKGSLAFLNYPA-QLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLAD  160 (350)
Q Consensus        87 ~~~ls~~~~~~~~l~~~al~~~s~~~-~~v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~~~  160 (350)
                      +...-+++..++.+...+++++|.+. |.+......+.+.+++.++  ++|++++.+++++.++++|++.....+
T Consensus        33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~--f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLL--FDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            34445567788999999999999986 4566678899999999999  999999999999999999999887654

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.25  E-value=0.0075  Score=57.40  Aligned_cols=77  Identities=12%  Similarity=0.215  Sum_probs=68.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhccCCC
Q 018776          239 VYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADD  316 (350)
Q Consensus       239 ~~~~l~l~~~~~~l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~~k~~  316 (350)
                      +|.++++ +++=+.++++...+.++++.+...+......+++.++|++++++++++.|++|+.++++|+.+-......
T Consensus        79 ~w~y~ll-a~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~  155 (334)
T PF06027_consen   79 WWKYFLL-ALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVL  155 (334)
T ss_pred             HHHHHHH-HHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeeccc
Confidence            4555555 4566789999999999999999999999999999999999999999999999999999999988777543

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.24  E-value=0.0039  Score=49.58  Aligned_cols=64  Identities=19%  Similarity=0.176  Sum_probs=53.2

Q ss_pred             HHHHHHHHHHHHhhcHHH-HHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhccC
Q 018776          251 FIGQVSVLSLIALFGAAT-TAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPA  314 (350)
Q Consensus       251 ~l~~~~~~~~i~~~sa~t-~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~~k  314 (350)
                      .+++++...++++.+-.. +++..-+.-+.+.+.|+++|||++|+.+++|+.+++.|+..-+..+
T Consensus        41 ~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         41 CASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            355666677788777654 6777778889999999999999999999999999999999986554

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.21  E-value=0.0022  Score=50.17  Aligned_cols=71  Identities=11%  Similarity=0.127  Sum_probs=60.6

Q ss_pred             HHHHHHHHHhhHHHHHhhhhcCchhH-HHHHhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHHhcc
Q 018776           87 YVKLSAVLMGSHGLTKGSLAFLNYPA-QLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLA  159 (350)
Q Consensus        87 ~~~ls~~~~~~~~l~~~al~~~s~~~-~~v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~~  159 (350)
                      ....-+++..+..+.-.|+|++|.++ |.+--....+-+.+.++++  ++|+.+..+++++.++++|++.....
T Consensus        33 ~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~--f~E~l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          33 SILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLL--FGESLSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHh--cCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence            33445567788899999999999986 5777778888999999999  99999999999999999999987654

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.09  E-value=0.023  Score=47.08  Aligned_cols=131  Identities=21%  Similarity=0.278  Sum_probs=87.4

Q ss_pred             HHHHHHHHHHHHhHHHHHHHHHhhCCCCChHhHHHHHHHhHHHHHHHHhhccchHHHHHHHHHhchHHHHHHHHHHHHHH
Q 018776          172 VIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATF  251 (350)
Q Consensus       172 ~~~~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~l~l~~~~~~  251 (350)
                      .++.+.+-.+-+++..++-++.++.+  +++.-.+.+...++..+....+..++.  ........| +|  .+++++.++
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~~g--s~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p-~w--~~lGG~lG~   75 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKALG--SPLVASFISFGVGFILLLIILLITGRP--SLASLSSVP-WW--AYLGGLLGV   75 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhC--ccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCC-hH--HhccHHHHH
Confidence            34556666677777777777766543  477777778878877776655544432  122122233 22  334666776


Q ss_pred             HHHHHHHHHHHhhcHHHHHHHHhHHHHH-HHHHHHH-hcC---CCcchhhhhhHHHHHHHHHH
Q 018776          252 IGQVSVLSLIALFGAATTAMVTTARKAV-TLLLSYL-IFT---KPLTEQHGTGLLLIAMGITL  309 (350)
Q Consensus       252 l~~~~~~~~i~~~sa~t~sv~~~l~~v~-~i~ls~~-lfg---e~~t~~~~iG~~lvl~Gv~l  309 (350)
                      +...+....+.+.|+..+......-++. ++++..+ +||   +++++...+|.++++.|+.+
T Consensus        76 ~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   76 FFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            6667778889999999888877775554 4444554 343   79999999999999999864

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.06  E-value=0.0044  Score=48.79  Aligned_cols=69  Identities=16%  Similarity=0.211  Sum_probs=59.2

Q ss_pred             HHHHHHHHhhHHHHHhhhhcCchhH-HHHHhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHHhc
Q 018776           88 VKLSAVLMGSHGLTKGSLAFLNYPA-QLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTL  158 (350)
Q Consensus        88 ~~ls~~~~~~~~l~~~al~~~s~~~-~~v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~  158 (350)
                      ...-.++..+..+...+++.+|.++ |.+--....+.+.+.+.++  +||+.++.+++++.++++|++....
T Consensus        33 ~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~--f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         33 IITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVL--LGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHH--hCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            3345567788899999999999886 5677778889999999999  8999999999999999999998754

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.97  E-value=0.0053  Score=48.65  Aligned_cols=66  Identities=8%  Similarity=0.258  Sum_probs=57.2

Q ss_pred             HHHHHHHhhHHHHHhhhhcCchhH-HHHHhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHH
Q 018776           89 KLSAVLMGSHGLTKGSLAFLNYPA-QLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILF  156 (350)
Q Consensus        89 ~ls~~~~~~~~l~~~al~~~s~~~-~~v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~  156 (350)
                      ..-..+..+..+...++|++|.++ |.+--....+.+.+.+.++  ++|+.++.+++++.+++.|++..
T Consensus        40 ~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~--f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         40 LSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWIL--FGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHH--cCCCCCHHHHHHHHHHHHHHHHh
Confidence            344567788889999999999986 5677778888999999999  89999999999999999999875

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.93  E-value=0.01  Score=46.79  Aligned_cols=62  Identities=13%  Similarity=0.072  Sum_probs=52.9

Q ss_pred             HHHHHHHHHHHHhhcHH-HHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhc
Q 018776          251 FIGQVSVLSLIALFGAA-TTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLL  312 (350)
Q Consensus       251 ~l~~~~~~~~i~~~sa~-t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~  312 (350)
                      .+++++...++++.+-. .+++..-+..+.+.+.|+++|||++|+.+++|+.+++.|+..-+.
T Consensus        40 ~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         40 IVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            35666677778877764 478888899999999999999999999999999999999987644

>PRK13499 rhamnose-proton symporter; Provisional

Probab=96.91  E-value=0.42  Score=45.69  Aligned_cols=219  Identities=10%  Similarity=0.009  Sum_probs=124.1

Q ss_pred             HHHHHHhhHHHHHhhhhcCchhHHH-HHhhcchHHHHHHHHhhccCcccc---C----hhhHHHHHHHHHHHHHHhc---
Q 018776           90 LSAVLMGSHGLTKGSLAFLNYPAQL-MFKSTKVLPVMVMGAFIPGLRRKY---P----AHEYVSALLLVVGLILFTL---  158 (350)
Q Consensus        90 ls~~~~~~~~l~~~al~~~s~~~~~-v~ks~~pi~v~il~~l~~~l~~r~---~----~~~~~~v~l~~~Gv~l~~~---  158 (350)
                      -+++....+.++..+.+|+.++... +.-....+...++..++  ++|=.   +    ..-.++++++++|+++.+.   
T Consensus        79 ~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~--~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~  156 (345)
T PRK13499         79 FGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPII--NGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQ  156 (345)
T ss_pred             HHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHH--ccccccccccchHHHHHHHHHHHHHHHHHHHHhhh
Confidence            3556678888999999998777554 44445566677777777  55422   1    3346889999999999988   


Q ss_pred             -cCCCCC-----CCchHHHHHHHHHHHHHHHhHHH-------HHHHHHhhCCCCChHhHHHHHHH---hHHH-HHHHHhh
Q 018776          159 -ADAQTS-----PNFSMIGVIMISGALIMDSFLGN-------LQEAIFTMNPETTQMEMLFCSTV---VGLP-MLIPPML  221 (350)
Q Consensus       159 -~~~~~~-----~~~~~~G~~~~l~s~~~~a~~~v-------~~~~l~~~~~~~~~~~~~~~~~~---~~~~-~~l~~~~  221 (350)
                       .|.+.+     ..+...|+++++++.+.++.++.       ..+.... .+ .++.....-+.+   ++.. ..+....
T Consensus       157 ~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~-~g-~~~~~~~lp~~~~~~~G~~~~n~~~~~  234 (345)
T PRK13499        157 LKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAA-LG-VDPLYAALPSYVVIMGGGAITNLGFCF  234 (345)
T ss_pred             hcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhh-cC-CCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence             554221     23467999999999999999883       3322111 11 122211111110   1111 1111111


Q ss_pred             c---cch-HHHHHHHHHhchHHHHH---HHHHHHHHHHHHHHHHHHHHhhcHHHHHH---HH-hHHHHHHHHHHHHhcCC
Q 018776          222 L---TGE-LFKAWNSCSQHLYVYGV---LVFEAMATFIGQVSVLSLIALFGAATTAM---VT-TARKAVTLLLSYLIFTK  290 (350)
Q Consensus       222 ~---~g~-~~~~~~~~~~~~~~~~~---l~l~~~~~~l~~~~~~~~i~~~sa~t~sv---~~-~l~~v~~i~ls~~lfge  290 (350)
                      .   .++ .....++....+..+.-   ..+.++.-.+++.++...-++.|.....+   .+ .+.-+++.+.|++ ++|
T Consensus       235 ~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi~-lkE  313 (345)
T PRK13499        235 IRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGLV-LKE  313 (345)
T ss_pred             HHHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhhh-hhh
Confidence            0   000 00000000000111221   23344444566677777777665443333   33 6666888899984 888


Q ss_pred             Ccc------hhhhhhHHHHHHHHHHHhcc
Q 018776          291 PLT------EQHGTGLLLIAMGITLKLLP  313 (350)
Q Consensus       291 ~~t------~~~~iG~~lvl~Gv~ly~~~  313 (350)
                      .=+      ...++|.++++.|..+-.+.
T Consensus       314 ~K~a~~k~~~~l~~G~vliI~g~~lig~~  342 (345)
T PRK13499        314 WKGASRRPVRVLSLGCVVIILAANIVGLG  342 (345)
T ss_pred             ccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence            655      56799999999999887654

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=96.88  E-value=0.0078  Score=47.85  Aligned_cols=69  Identities=10%  Similarity=0.210  Sum_probs=58.1

Q ss_pred             HHHHHHhhHHHHHhhhhcCchhHH-HHHhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHHhccC
Q 018776           90 LSAVLMGSHGLTKGSLAFLNYPAQ-LMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLAD  160 (350)
Q Consensus        90 ls~~~~~~~~l~~~al~~~s~~~~-~v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~~~  160 (350)
                      .-+++..++.+...+++.+|.+.+ .+--....+.+.+.++++  ++|+.++.+++++.++++|++.....+
T Consensus        36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~--f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGF--FGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            344577888888999999999865 454557888889999999  999999999999999999999987644

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=96.86  E-value=0.0032  Score=57.44  Aligned_cols=76  Identities=9%  Similarity=0.049  Sum_probs=51.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcH-HHHHHHHhHHHHHHHHHHHH-hcCCC-----cchhhhhhHHHHHHHHHHHhccCCC
Q 018776          244 VFEAMATFIGQVSVLSLIALFGA-ATTAMVTTARKAVTLLLSYL-IFTKP-----LTEQHGTGLLLIAMGITLKLLPADD  316 (350)
Q Consensus       244 ~l~~~~~~l~~~~~~~~i~~~sa-~t~sv~~~l~~v~~i~ls~~-lfge~-----~t~~~~iG~~lvl~Gv~ly~~~k~~  316 (350)
                      .+++..-+.++.+..-+++..|= +-..+.++..-+.....|-+ +||.+     -.+.+++|++++++|..++...|..
T Consensus        59 mlgG~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~  138 (254)
T PF07857_consen   59 MLGGALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSE  138 (254)
T ss_pred             HhhhhhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCC
Confidence            33444444566666666666663 33555566666677777655 67632     2468999999999999999998876


Q ss_pred             Ccc
Q 018776          317 KPI  319 (350)
Q Consensus       317 ~~~  319 (350)
                      +++
T Consensus       139 ~~~  141 (254)
T PF07857_consen  139 EKE  141 (254)
T ss_pred             CCC
Confidence            643

The region concerned is approximately 280 residues long.

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.83  E-value=0.014  Score=46.32  Aligned_cols=61  Identities=16%  Similarity=0.214  Sum_probs=51.8

Q ss_pred             HHHHHHHHHHHHhhcHHH-HHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHh
Q 018776          251 FIGQVSVLSLIALFGAAT-TAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKL  311 (350)
Q Consensus       251 ~l~~~~~~~~i~~~sa~t-~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~  311 (350)
                      .+++++...++++.+-.+ +++..-+.-+.+.+.|+++|||++|+.+++|+++++.|+..-.
T Consensus        46 ~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         46 LAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            356666677788777654 7888888999999999999999999999999999999998743

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.83  E-value=0.012  Score=46.07  Aligned_cols=62  Identities=21%  Similarity=0.130  Sum_probs=52.9

Q ss_pred             HHHHHHHHHHHhhcHH-HHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhcc
Q 018776          252 IGQVSVLSLIALFGAA-TTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLP  313 (350)
Q Consensus       252 l~~~~~~~~i~~~sa~-t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~~  313 (350)
                      +++.+....+|+.+-. .+++.+-+-.+.+.+.|+++|||++++.+++|+.+++.|+..-+..
T Consensus        42 ~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          42 LSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             HHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence            4556666778887754 4888899999999999999999999999999999999999876654

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=96.71  E-value=0.0027  Score=60.02  Aligned_cols=87  Identities=14%  Similarity=0.195  Sum_probs=75.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhccCCCCcccccc
Q 018776          244 VFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADDKPIKRTA  323 (350)
Q Consensus       244 ~l~~~~~~l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~~k~~~~~~~~~  323 (350)
                      +..|..-+++++.+..+++.++....+++.+...++++.++.++-+|++|....++..+.++|+.+.+..+.+++....+
T Consensus       163 l~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a  242 (416)
T KOG2765|consen  163 LFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPA  242 (416)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCCc
Confidence            33455667899999999999999999999999999999999999999999999999999999999999998877665555


Q ss_pred             ccchhhh
Q 018776          324 TSSFKVN  330 (350)
Q Consensus       324 ~~~~~~~  330 (350)
                      .++..-|
T Consensus       243 ~~~llG~  249 (416)
T KOG2765|consen  243 SRPLLGN  249 (416)
T ss_pred             cchhHHH
Confidence            5555544

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=96.59  E-value=0.03  Score=52.68  Aligned_cols=121  Identities=18%  Similarity=0.179  Sum_probs=86.0

Q ss_pred             chHHHHHHHHHHHHHHHhHHHHHHHHHhhCCCCChHhHHHHHHHhHHHHHHHHhhccchHHHHHHHHHhchHHHHHHHHH
Q 018776          167 FSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFE  246 (350)
Q Consensus       167 ~~~~G~~~~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~l~l~  246 (350)
                      +..+|..+++.++++.+...++||+-..+.++.+ ..                   .++  ..... ..+|.+|.=+.+.
T Consensus         4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~-~~-------------------~~~--~~~~~-l~~~~W~~G~~~~   60 (300)
T PF05653_consen    4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGS-LR-------------------AGS--GGRSY-LRRPLWWIGLLLM   60 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-cc-------------------ccc--hhhHH-HhhHHHHHHHHHH
Confidence            4689999999999999999999998766543210 00                   000  00000 1223333212221


Q ss_pred             HHHHHHHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhccC
Q 018776          247 AMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPA  314 (350)
Q Consensus       247 ~~~~~l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~~k  314 (350)
                          .+++...+.++...++...+..+.+.-+++.+++.++++|+++...++|.++++.|..+-....
T Consensus        61 ----~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~  124 (300)
T PF05653_consen   61 ----VLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFA  124 (300)
T ss_pred             ----hcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeC
Confidence                2455556677888899999999999999999999999999999999999999999998765543

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=96.34  E-value=0.0011  Score=59.91  Aligned_cols=72  Identities=18%  Similarity=0.422  Sum_probs=64.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhccC
Q 018776          243 LVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPA  314 (350)
Q Consensus       243 l~l~~~~~~l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~~k  314 (350)
                      +++-++.++.|.+..|++..+.+-.-+++++...|++++++++++++|+.|....+|..+.+.|+.+-....
T Consensus       100 LiLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPp  171 (346)
T KOG4510|consen  100 LILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPP  171 (346)
T ss_pred             EEeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCC
Confidence            445566777888888999999999999999999999999999999999999999999999999999977654

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=95.92  E-value=0.071  Score=49.07  Aligned_cols=80  Identities=23%  Similarity=0.261  Sum_probs=62.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHhHHHHH-HHHHHHHhcCCCcchhh----hhhHHHHHHHHHHHhccC
Q 018776          240 YGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAV-TLLLSYLIFTKPLTEQH----GTGLLLIAMGITLKLLPA  314 (350)
Q Consensus       240 ~~~l~l~~~~~~l~~~~~~~~i~~~sa~t~sv~~~l~~v~-~i~ls~~lfge~~t~~~----~iG~~lvl~Gv~ly~~~k  314 (350)
                      +..-++++++-.++|...+...++.|-..+..+++--+++ +.+.++++|||--+..+    .+++++++.|+.+.++.+
T Consensus        45 ~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~  124 (269)
T PF06800_consen   45 FIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQD  124 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcccc
Confidence            3334556666678999999999999999888888665555 78899999999766544    458889999999998877


Q ss_pred             CCCcc
Q 018776          315 DDKPI  319 (350)
Q Consensus       315 ~~~~~  319 (350)
                      +++++
T Consensus       125 ~~~~~  129 (269)
T PF06800_consen  125 KKSDK  129 (269)
T ss_pred             ccccc
Confidence            65553

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=95.90  E-value=0.034  Score=42.72  Aligned_cols=54  Identities=15%  Similarity=0.036  Sum_probs=31.7

Q ss_pred             HHHHHHHHHHHHHhhcHHH-HHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHH
Q 018776          250 TFIGQVSVLSLIALFGAAT-TAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLI  303 (350)
Q Consensus       250 ~~l~~~~~~~~i~~~sa~t-~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lv  303 (350)
                      -.++.+++..++++.+..+ +.+..-+..+.+.+.|+++|||++|+.+++|+.++
T Consensus        39 ~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   39 YGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            3456677778888887766 46677788899999999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=95.84  E-value=0.53  Score=44.65  Aligned_cols=63  Identities=22%  Similarity=0.289  Sum_probs=58.3

Q ss_pred             HHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhccC
Q 018776          252 IGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPA  314 (350)
Q Consensus       252 l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~~k  314 (350)
                      +-|...|....+.+|.+..+...+|-..|.+++++++++.++..||...++.+.|+.+.++..
T Consensus       104 lqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~  166 (345)
T KOG2234|consen  104 LQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPS  166 (345)
T ss_pred             HhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccC
Confidence            445688999999999999999999999999999999999999999999999999999998544

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.35  E-value=0.53  Score=39.38  Aligned_cols=139  Identities=19%  Similarity=0.196  Sum_probs=80.6

Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHhhCCCCChHhHHHHHHHhHHHHHHHHhhccchHHHHHHHHHhchHHHHHHHHHHH
Q 018776          169 MIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAM  248 (350)
Q Consensus       169 ~~G~~~~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~l~l~~~  248 (350)
                      ...+++.+.+-.+-.++...+.|+.+..+  +|.--.+.+...++..++...+.... .+.+.....+|+ |.  +..++
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~--spl~As~isf~vGt~~L~~l~l~~~~-~~~~a~~~~~pw-W~--~~GG~   77 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLG--SPLLASLISFLVGTVLLLILLLIKQG-HPGLAAVASAPW-WA--WIGGL   77 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcC--ChHHHHHHHHHHHHHHHHHHHHHhcC-CCchhhccCCch-HH--HHccc
Confidence            44566667777777778888888766543  46666666777777666554333221 111222233342 22  22233


Q ss_pred             HHHHHHHHHHHHHHhhcHHHHHHHHhHHHHH-HHHHHHHh-cC---CCcchhhhhhHHHHHHHHHHHhcc
Q 018776          249 ATFIGQVSVLSLIALFGAATTAMVTTARKAV-TLLLSYLI-FT---KPLTEQHGTGLLLIAMGITLKLLP  313 (350)
Q Consensus       249 ~~~l~~~~~~~~i~~~sa~t~sv~~~l~~v~-~i~ls~~l-fg---e~~t~~~~iG~~lvl~Gv~ly~~~  313 (350)
                      ++++.-...-....+.|+.++..+...-++. +.++..+= ||   .+++...++|++++++|+++....
T Consensus        78 lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~  147 (150)
T COG3238          78 LGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRF  147 (150)
T ss_pred             hhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhccc
Confidence            3333333344566788887766665554443 44444442 33   689999999999999997665543

>TIGR00803 nst UDP-galactose transporter

Probab=95.25  E-value=0.091  Score=46.92  Aligned_cols=64  Identities=11%  Similarity=0.230  Sum_probs=55.2

Q ss_pred             HHHHHHhhHHHHHhhhhcCchhHHHHHhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHH
Q 018776           90 LSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLIL  155 (350)
Q Consensus        90 ls~~~~~~~~l~~~al~~~s~~~~~v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l  155 (350)
                      +.++......+-++.++|.+..+..+.-+..++++.+++.++  ++++++..++.+..++..|+.+
T Consensus       158 ~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~--f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       158 VGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRL--FDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHH--hcCCccHHHHHHHHHHHeeeEe
Confidence            344555666678899999999899999999999999999999  8999999999999999888653

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=95.20  E-value=0.026  Score=44.87  Aligned_cols=69  Identities=12%  Similarity=0.095  Sum_probs=55.3

Q ss_pred             HHHHHHHHHHhhHHHHHhhhhcCchhHHH-HHhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHH
Q 018776           86 TYVKLSAVLMGSHGLTKGSLAFLNYPAQL-MFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILF  156 (350)
Q Consensus        86 ~~~~ls~~~~~~~~l~~~al~~~s~~~~~-v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~  156 (350)
                      +|...=+++..+....++.+...+.+... +..++.-++|++.++++  .+|..+++.+++++++++|+.+.
T Consensus        43 ~y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~l--ge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   43 KYIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLL--GEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHh--cCcccchhHHHHHHHHHcCeeee
Confidence            35544456667777888899998888766 45789999999999998  56777888899999999998754

Many members are annotated as potential transmembrane proteins.

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=95.19  E-value=0.045  Score=42.04  Aligned_cols=55  Identities=13%  Similarity=0.138  Sum_probs=34.1

Q ss_pred             HHHhhHHHHHhhhhcCchhH-HHHHhhcchHHHHHHHHhhccCccccChhhHHHHHHH
Q 018776           93 VLMGSHGLTKGSLAFLNYPA-QLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLL  149 (350)
Q Consensus        93 ~~~~~~~l~~~al~~~s~~~-~~v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~  149 (350)
                      ++..+..+...+++++|.+. |.+......+.+.+.+.++  ++|+.++.+++++.++
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~--f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFF--FGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHH--H--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHH--hCCCCCHHHHhheeeC
Confidence            67788889999999999886 4677778899999999999  8999999999998764

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=94.88  E-value=0.57  Score=42.48  Aligned_cols=62  Identities=13%  Similarity=-0.005  Sum_probs=55.6

Q ss_pred             hhHHHHHhhhhcCchhHHHHHhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHHhcc
Q 018776           96 GSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLA  159 (350)
Q Consensus        96 ~~~~l~~~al~~~s~~~~~v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~~  159 (350)
                      .-..+...+++.+|.++..++-|..|.+-.+.++++  ++|+++..||+++..++.+..=.+++
T Consensus       222 lPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~--L~e~ls~~qwlaI~~ViaAsaG~~lt  283 (292)
T COG5006         222 LPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIF--LGETLTLIQWLAIAAVIAASAGSTLT  283 (292)
T ss_pred             cchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHhccccc
Confidence            556788999999999999999999999999999999  99999999999999988887755443

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=94.84  E-value=0.55  Score=44.46  Aligned_cols=143  Identities=11%  Similarity=0.055  Sum_probs=80.8

Q ss_pred             chHHHHHHHHHHHHHHHhHHHHHHHHHhhCCCCChHhHHHH-HHHhHHHHHHHHh---hccchHHHHHHHHHhch-HHHH
Q 018776          167 FSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFC-STVVGLPMLIPPM---LLTGELFKAWNSCSQHL-YVYG  241 (350)
Q Consensus       167 ~~~~G~~~~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~l~~~---~~~g~~~~~~~~~~~~~-~~~~  241 (350)
                      .-..|+++..+..++++.+.+=.||+.+ .    .+|.... ..+++.. .+|..   +...++.+   .....| ..+.
T Consensus         4 ~ii~Gii~h~iGg~~~~sfy~P~kkvk~-W----sWEs~Wlv~gi~swl-i~P~~~a~l~ip~~~~---i~~~~~~~~l~   74 (344)
T PF06379_consen    4 AIILGIIFHAIGGFASGSFYVPFKKVKG-W----SWESYWLVQGIFSWL-IVPWLWALLAIPDFFS---IYSATPASTLF   74 (344)
T ss_pred             hHHHHHHHHHHHHHHhhhhccchhhcCC-c----cHHHHHHHHHHHHHH-HHHHHHHHHhCCcHHH---HHHhCChhHHH
Confidence            4578999999999999988877776422 2    2443322 2222221 22221   22223322   223333 2222


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcHH-HHHHHHhHHHHHHHHHHHHhcC-------CCcchhhhhhHHHHHHHHHHHhcc
Q 018776          242 VLVFEAMATFIGQVSVLSLIALFGAA-TTAMVTTARKAVTLLLSYLIFT-------KPLTEQHGTGLLLIAMGITLKLLP  313 (350)
Q Consensus       242 ~l~l~~~~~~l~~~~~~~~i~~~sa~-t~sv~~~l~~v~~i~ls~~lfg-------e~~t~~~~iG~~lvl~Gv~ly~~~  313 (350)
                      ...+.++.--++.+.+-..+++.|-. ..++.--+..++..++--++.|       .+-...-++|.++++.|+.+..+.
T Consensus        75 ~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A  154 (344)
T PF06379_consen   75 WTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA  154 (344)
T ss_pred             HHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH
Confidence            33333444446777777788887743 4555554545555555444322       333457899999999999999888


Q ss_pred             CCCCc
Q 018776          314 ADDKP  318 (350)
Q Consensus       314 k~~~~  318 (350)
                      ..+|.
T Consensus       155 G~~Ke  159 (344)
T PF06379_consen  155 GSMKE  159 (344)
T ss_pred             HHhhh
Confidence            65443

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=94.81  E-value=0.12  Score=48.67  Aligned_cols=137  Identities=8%  Similarity=0.041  Sum_probs=91.2

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhhhhc--cCCCChhhHHHHHHHHHHHHHHH-Hh-----cccC-----CCCCChhHH
Q 018776           20 PKWQQFLICSSGFFFGYLVNGVCEEYVYN--RLQFSYGWYFTFIQGFVYLVLIY-LQ-----GFTT-----KQMMNPWKT   86 (350)
Q Consensus        20 p~~~~l~~~~~gi~~~~~~~~~~~e~i~~--~~~f~~p~~lt~~q~~~~~~~~~-~~-----~~~~-----~~~~~~~~~   86 (350)
                      ..|..++.+..++ +.+.+..++.|++++  +++.+....+ ..|.-+.++... +.     +...     .+...+...
T Consensus       160 fn~~G~i~a~~s~-~~~al~~I~~~~ll~~~~~~~~~~~ll-~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~  237 (316)
T KOG1441|consen  160 FNLFGFISAMISN-LAFALRNILSKKLLTSKGESLNSMNLL-YYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLI  237 (316)
T ss_pred             ccHHHHHHHHHHH-HHHHHHHHHHHHhhhccccccCchHHH-HHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHH
Confidence            3455665555544 466788899999885  3444432222 223222222222 21     1110     011111222


Q ss_pred             HHHHHHHHHhhHHHHHhhhhcCchhHHHHHhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHHhccC
Q 018776           87 YVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLAD  160 (350)
Q Consensus        87 ~~~ls~~~~~~~~l~~~al~~~s~~~~~v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~~~  160 (350)
                      ....++++.+.+...+..+..++.-+++++-..|=+.+.+.++++  ++++.++.+.+|.++.++|+.+.....
T Consensus       238 ~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~i--F~~pvt~~n~~G~~iai~Gv~~Y~~~k  309 (316)
T KOG1441|consen  238 LLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLI--FGNPVTFLNALGYAIAILGVFLYSRAK  309 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeee--ecCCCchhhHHHHHHHHHHHHHHHHHh
Confidence            233466677788899999999999999999999999999999999  899999999999999999999987644

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=94.45  E-value=0.0099  Score=53.31  Aligned_cols=207  Identities=13%  Similarity=0.189  Sum_probs=127.1

Q ss_pred             HHHHhhHHHHHhhhhcCchhHHH-HHhhcchHHHHHHHHhhccCccccChhhH----HHHHHHHHHHHHHhccCCCC---
Q 018776           92 AVLMGSHGLTKGSLAFLNYPAQL-MFKSTKVLPVMVMGAFIPGLRRKYPAHEY----VSALLLVVGLILFTLADAQT---  163 (350)
Q Consensus        92 ~~~~~~~~l~~~al~~~s~~~~~-v~ks~~pi~v~il~~l~~~l~~r~~~~~~----~~v~l~~~Gv~l~~~~~~~~---  163 (350)
                      +.....-..++.|.+++.++.+. +-..+..+-+-+++.+.  ++|-.+..+.    .++++++.|+.+-++.|.++   
T Consensus        67 ~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~--f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~  144 (288)
T COG4975          67 AFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFV--FHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEE  144 (288)
T ss_pred             hHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEE--EeccCcchhHHHHHHHHHHHHHhheEeeeeccccccc
Confidence            34456777889999998776544 22223445566778888  8998887774    56788899999998887522   


Q ss_pred             -CCCchHHHHHHHHHHHHHHHhHHHHHHHHHhhCCCCChHhHHHHHHHhHHHHHHHHh-hccchHHHHHHHHHhchHHHH
Q 018776          164 -SPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPM-LLTGELFKAWNSCSQHLYVYG  241 (350)
Q Consensus       164 -~~~~~~~G~~~~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~g~~~~~~~~~~~~~~~~~  241 (350)
                       ++++.-.|+...+.|.+-+-.|.+..+.. +    .+.+....-++ ++........ ....|..       .+-..|.
T Consensus       145 ~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f-~----v~g~saiLPqA-iGMv~~ali~~~~~~~~~-------~~K~t~~  211 (288)
T COG4975         145 ENPSNLKKGIVILLISTLGYVGYVVLFQLF-D----VDGLSAILPQA-IGMVIGALILGFFKMEKR-------FNKYTWL  211 (288)
T ss_pred             cChHhhhhheeeeeeeccceeeeEeeeccc-c----ccchhhhhHHH-HHHHHHHHHHhhcccccc-------hHHHHHH
Confidence             23345678877777777766666554321 1    12222222221 2222211110 1111110       0111232


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchh----hhhhHHHHHHHHHHHhccC
Q 018776          242 VLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQ----HGTGLLLIAMGITLKLLPA  314 (350)
Q Consensus       242 ~l~l~~~~~~l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~----~~iG~~lvl~Gv~ly~~~k  314 (350)
                      .++ .++.-..++++++..-++.|-.|.=..+.+.-+++.+.|+++++|+=|..    -++|+++++.|..+-...|
T Consensus       212 nii-~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg~~K  287 (288)
T COG4975         212 NII-PGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLGIAK  287 (288)
T ss_pred             HHh-hHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhheec
Confidence            222 23344578888888888888777666667778899999999999988864    4678888888887766554

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=92.83  E-value=0.46  Score=37.82  Aligned_cols=59  Identities=19%  Similarity=0.241  Sum_probs=49.1

Q ss_pred             HHHHHHHHHHHHhhcHHHHHHH-HhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHH
Q 018776          251 FIGQVSVLSLIALFGAATTAMV-TTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITL  309 (350)
Q Consensus       251 ~l~~~~~~~~i~~~sa~t~sv~-~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~l  309 (350)
                      ..|...+++.+++.+=+.+..+ +.+.-++|.+.++++.+|..+...++|+++++.|+.+
T Consensus        52 q~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   52 QSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence            3566777788888887766665 5888999999998888888899999999999999865

Many members are annotated as potential transmembrane proteins.

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=91.43  E-value=6.8  Score=32.32  Aligned_cols=101  Identities=15%  Similarity=0.200  Sum_probs=62.1

Q ss_pred             hhhHHHHHHHHHHHHHH----HHhcccC--CCCCChhHHHHHHHHHHHhhHHHHHhhhhcCchhHHHHHh-hcchHHHHH
Q 018776           54 YGWYFTFIQGFVYLVLI----YLQGFTT--KQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFK-STKVLPVMV  126 (350)
Q Consensus        54 ~p~~lt~~q~~~~~~~~----~~~~~~~--~~~~~~~~~~~~ls~~~~~~~~l~~~al~~~s~~~~~v~k-s~~pi~v~i  126 (350)
                      .|+.-+++.+.+..+..    ...+.+.  ..++.||+.|+ =+++-.....+...+...+.++..+++- ....+.-++
T Consensus        29 s~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~~l-GG~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~  107 (138)
T PF04657_consen   29 SPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWAYL-GGLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLL  107 (138)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHHhc-cHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Confidence            46666666555543321    1222211  12356777665 3555556666777888888877655433 345555666


Q ss_pred             HHHh--hccCccccChhhHHHHHHHHHHHHH
Q 018776          127 MGAF--IPGLRRKYPAHEYVSALLLVVGLIL  155 (350)
Q Consensus       127 l~~l--~~~l~~r~~~~~~~~v~l~~~Gv~l  155 (350)
                      ++.+  ++--++++++++.+++.++++|+.+
T Consensus       108 iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen  108 IDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            7764  2114789999999999999999864

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=90.77  E-value=0.28  Score=43.96  Aligned_cols=66  Identities=15%  Similarity=0.205  Sum_probs=57.1

Q ss_pred             HHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhccCCCC
Q 018776          252 IGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADDK  317 (350)
Q Consensus       252 l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~~k~~~  317 (350)
                      ++....+.+++...=-|..+--+.||+-..++|+.+.++.-.+..+.-..++..|+.++.|...|.
T Consensus        97 lAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv  162 (337)
T KOG1580|consen   97 LAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKV  162 (337)
T ss_pred             HHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhcccccc
Confidence            345667788888888888888899999999999999999999999999999999999998875443

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=90.48  E-value=3.4  Score=38.54  Aligned_cols=127  Identities=14%  Similarity=0.220  Sum_probs=86.4

Q ss_pred             hHHHHHHHHHhhCC--CC----ChHhHHHHHHHhHHHHHHHHhhccchHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHH
Q 018776          184 FLGNLQEAIFTMNP--ET----TQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSV  257 (350)
Q Consensus       184 ~~~v~~~~l~~~~~--~~----~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~l~l~~~~~~l~~~~~  257 (350)
                      .++++|||++.+.-  +.    ++.-+.+.+.+.+.......+  .     .+.-...+...|..-...++...++..+.
T Consensus        28 ~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l--~-----~~k~~~~~~apl~~y~~is~tn~~s~~~~  100 (327)
T KOG1581|consen   28 TWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAML--K-----WWKKELSGVAPLYKYSLISFTNTLSSWCG  100 (327)
T ss_pred             HHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHH--h-----cccccCCCCCchhHHhHHHHHhhcchHHH
Confidence            45689999987531  11    223344455554443332111  0     01100112222332333456666777888


Q ss_pred             HHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhccCCCC
Q 018776          258 LSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADDK  317 (350)
Q Consensus       258 ~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~~k~~~  317 (350)
                      +-++++.|=-|..+.-..|-+..++.+.++.+.+.++...+-..++-.|+.+..+.+...
T Consensus       101 yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~  160 (327)
T KOG1581|consen  101 YEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSD  160 (327)
T ss_pred             HHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCC
Confidence            899999999999999999999999999999999999999999999999999999886544

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=87.50  E-value=0.24  Score=44.68  Aligned_cols=133  Identities=17%  Similarity=0.161  Sum_probs=79.5

Q ss_pred             HHHHHHHHHHHHHhHHHHHHHHHhhCCCCChHhHHHHHHHhHHHHHHHHhhccchHHHHHHHHHhchHHHHHHHHHHHHH
Q 018776          171 GVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMAT  250 (350)
Q Consensus       171 G~~~~l~s~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~l~l~~~~~  250 (350)
                      +++.+++=++.|+.......|.    + ..|.+...-+.+=++.+.+...+...+..        ++..+..-++++..-
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~----G-G~p~qQ~lGtT~GALifaiiv~~~~~p~~--------T~~~~iv~~isG~~W   69 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKF----G-GKPYQQTLGTTLGALIFAIIVFLFVSPEL--------TLTIFIVGFISGAFW   69 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeec----C-CChhHhhhhccHHHHHHHHHHheeecCcc--------chhhHHHHHHhhhHh
Confidence            3455666677777665544332    1 24566655554433333332222211110        111222223344444


Q ss_pred             HHHHHHHHHHHHhhcHHHHHHHHhHHH-HHHHHHHHHhcCCCcchhh----hhhHHHHHHHHHHHhccCCC
Q 018776          251 FIGQVSVLSLIALFGAATTAMVTTARK-AVTLLLSYLIFTKPLTEQH----GTGLLLIAMGITLKLLPADD  316 (350)
Q Consensus       251 ~l~~~~~~~~i~~~sa~t~sv~~~l~~-v~~i~ls~~lfge~~t~~~----~iG~~lvl~Gv~ly~~~k~~  316 (350)
                      .+||...+..++..|...+..+++-.+ +.+.+.|++.|||--++.+    .+.+++++.|+++.++.++.
T Consensus        70 s~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~  140 (288)
T COG4975          70 SFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRN  140 (288)
T ss_pred             hhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccc
Confidence            578999999999999988888776644 5577899999999777654    45677888898888877653

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=87.20  E-value=0.55  Score=40.96  Aligned_cols=64  Identities=11%  Similarity=0.134  Sum_probs=58.8

Q ss_pred             HHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhccCC
Q 018776          252 IGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPAD  315 (350)
Q Consensus       252 l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~~k~  315 (350)
                      .+++.+..++++.+|+.++-+...++.+.-+++++.+||++....++..++.+.|+.+-.|...
T Consensus        65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN  128 (290)
T KOG4314|consen   65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN  128 (290)
T ss_pred             cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc
Confidence            4678888999999999999999999999999999999999999999999999999998877643

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=85.61  E-value=2.3  Score=39.29  Aligned_cols=66  Identities=17%  Similarity=0.255  Sum_probs=56.9

Q ss_pred             HHHHHHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhcc
Q 018776          248 MATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLP  313 (350)
Q Consensus       248 ~~~~l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~~  313 (350)
                      +|-..|....|..+..++|+...+.--..-+++-++|.-+++++++..||+|+..+..|+....+.
T Consensus        94 l~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~  159 (372)
T KOG3912|consen   94 LCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL  159 (372)
T ss_pred             HHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence            444456666778888899999988888888999999999999999999999999999999887654

>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4)

Probab=84.43  E-value=0.3  Score=44.70  Aligned_cols=92  Identities=10%  Similarity=0.124  Sum_probs=0.0

Q ss_pred             HHHHHhhcchHHHHHHHHhhccCccccChh-hHHHHHHHHHHHHHHhccCCCCCCCchHHHHHHHHHHHHHHHhHHHHHH
Q 018776          112 AQLMFKSTKVLPVMVMGAFIPGLRRKYPAH-EYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGNLQE  190 (350)
Q Consensus       112 ~~~v~ks~~pi~v~il~~l~~~l~~r~~~~-~~~~v~l~~~Gv~l~~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~  190 (350)
                      ..+++.|...+.++++-.++. ||||.=.. -.+|++++.+-..+.+.-..  ..+.-+.|+++.++.+++.-..+.|.+
T Consensus        51 a~~vl~sfAvvliiIIiIIml-F~RrLLCPLGlLCiilimi~lLv~~L~tL--tGQ~LF~Gi~~l~l~~lLaL~vW~Ym~  127 (381)
T PF05297_consen   51 ALTVLYSFAVVLIIIIIIIML-FKRRLLCPLGLLCIILIMIVLLVSMLWTL--TGQTLFVGIVILFLCCLLALGVWFYMW  127 (381)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             hHHHHHHHHHHHHHHHHHHHH-HHHhhcCcchHHHHHHHHHHHHHHHHHHh--hccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            334444444433333322221 56665443 35666655555444443221  123457888776666655544555644


Q ss_pred             HHHhhCCCCChHhHHHHH
Q 018776          191 AIFTMNPETTQMEMLFCS  208 (350)
Q Consensus       191 ~l~~~~~~~~~~~~~~~~  208 (350)
                       ++++++ .+.++++.+.
T Consensus       128 -lLr~~G-As~WtiLaFc  143 (381)
T PF05297_consen  128 -LLRELG-ASFWTILAFC  143 (381)
T ss_dssp             ------------------
T ss_pred             -HHHHhh-hHHHHHHHHH
Confidence             556654 3456665443

LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=82.39  E-value=6.8  Score=36.18  Aligned_cols=121  Identities=10%  Similarity=0.180  Sum_probs=67.0

Q ss_pred             HHHHHHhhhhhccCCCChhhHHHHHHHHHHHHHHHH---------hcccCCCCCChhHHH-HHHHHHHHh-hHHHHHhhh
Q 018776           37 LVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLIYL---------QGFTTKQMMNPWKTY-VKLSAVLMG-SHGLTKGSL  105 (350)
Q Consensus        37 ~~~~~~~e~i~~~~~f~~p~~lt~~q~~~~~~~~~~---------~~~~~~~~~~~~~~~-~~ls~~~~~-~~~l~~~al  105 (350)
                      ..-|++||..+++++-+....+-..|++---.+...         ..+..++-..|.... ++....|.+ +...++.+.
T Consensus       177 a~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~Ci  256 (330)
T KOG1583|consen  177 AYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYFCI  256 (330)
T ss_pred             HHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHHHHHHHH
Confidence            345788999999887666666655665442122111         111111111111111 223333433 334566666


Q ss_pred             hcCchhHH-------HHHhhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHHhcc
Q 018776          106 AFLNYPAQ-------LMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLA  159 (350)
Q Consensus       106 ~~~s~~~~-------~v~ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~~  159 (350)
                      +.+..=+.       ++.-...=....+++.+.  ++..+++..|+|..+++.|.++++..
T Consensus       257 kgVy~L~te~~sLTVTlvltlRKFvSLl~Siiy--F~Npft~~h~lGa~lVF~Gt~~fa~~  315 (330)
T KOG1583|consen  257 KGVYILTTETSSLTVTLVLTLRKFVSLLFSIIY--FENPFTPWHWLGAALVFFGTLLFANV  315 (330)
T ss_pred             HhhhhhhceecceEEEEeeeHHHHHHHhheeeE--ecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            66542111       111112234456778777  89999999999999999999988753

>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine

Probab=81.44  E-value=0.74  Score=42.80  Aligned_cols=64  Identities=17%  Similarity=0.220  Sum_probs=36.0

Q ss_pred             HHHHHHHHHHHHHHHHhhcHHHHHHHHhHHHHHHHHHHHH---hcCCCcc--hhhhhhHHHHHHHHHHHhcc
Q 018776          247 AMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYL---IFTKPLT--EQHGTGLLLIAMGITLKLLP  313 (350)
Q Consensus       247 ~~~~~l~~~~~~~~i~~~sa~t~sv~~~l~~v~~i~ls~~---lfge~~t--~~~~iG~~lvl~Gv~ly~~~  313 (350)
                      ++.--+++++.-+.+...|-..+-+++.-   +++++|..   +.+.+.+  ..-+.|.+++++++++-...
T Consensus        79 GvvfnlgNillq~aia~aGmSVafpvg~g---lalVlGv~~NYfld~~~n~a~iLF~GV~cf~iAI~lga~a  147 (336)
T PF07168_consen   79 GVVFNLGNILLQAAIAFAGMSVAFPVGIG---LALVLGVTLNYFLDPKINRAEILFPGVACFLIAIILGAAA  147 (336)
T ss_pred             hHhhhhHHHHHHHHHHHhcceeeeeeecc---eEEEEeeeeeeeccCCCCCceEEEccHHHHHHHHHHHHHH
Confidence            33334677777777777666554444422   23333333   2345554  35566888888888776543

Transport is dependent on glucose and a proton gradient [].

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=80.08  E-value=2.3  Score=33.17  Aligned_cols=68  Identities=15%  Similarity=0.100  Sum_probs=50.9

Q ss_pred             HHHHHHHHHHhhHHHHHhhhhcCchhHHH-HHhhcchHHHHHHHHhhccCccccChhh-HHHHHHHHHHHHHH
Q 018776           86 TYVKLSAVLMGSHGLTKGSLAFLNYPAQL-MFKSTKVLPVMVMGAFIPGLRRKYPAHE-YVSALLLVVGLILF  156 (350)
Q Consensus        86 ~~~~ls~~~~~~~~l~~~al~~~s~~~~~-v~ks~~pi~v~il~~l~~~l~~r~~~~~-~~~v~l~~~Gv~l~  156 (350)
                      +|...-+++-....+.++-++..+.+.++ +..+.+.+++.+.+..+   +|+..-++ .++..++++|+.+.
T Consensus        54 ~Y~iPFllNqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~L---GE~~~g~~a~lGt~liv~Gi~Lc  123 (125)
T KOG4831|consen   54 EYLIPFLLNQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKAL---GEETQGGLALLGTSLIVFGIWLC  123 (125)
T ss_pred             HHHHHHHHHHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHh---ccccccceeehhhhHHhhhhhhe
Confidence            45555556666777788888888877665 56677889999999887   67776555 68888999998764

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	350
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-07

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 52.5 bits (125), Expect = 1e-07
 Identities = 53/359 (14%), Positives = 96/359 (26%), Gaps = 110/359 (30%)

Query: 4   NEEQTRSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQG 63
               T  LF   L  + +                   V +++V   L+ +Y +       
Sbjct: 60  AVSGTLRLFWT-LLSKQE-----------------EMV-QKFVEEVLRINYKF------- 93

Query: 64  FVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQL--MFKSTKV 121
                           +M+P KT  +            + S+    Y  Q   ++   +V
Sbjct: 94  ----------------LMSPIKTEQR------------QPSMMTRMYIEQRDRLYNDNQV 125

Query: 122 LPVMVMGAFIPGLRRKYPAHEYVSAL--------LLVVG--------LILFTLADAQTSP 165
                    +    R  P  +   AL        +L+ G        + L      +   
Sbjct: 126 FAKY----NVS---RLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQC 178

Query: 166 NFSMIGV--IMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLT 223
                 +  + +      ++ L  LQ+ ++ ++P  T            + + I      
Sbjct: 179 KMDF-KIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSR----SDHSSNIKLRI------ 227

Query: 224 GELFKAWNS--CSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTL 281
               +A          Y   +LV          V        F  +   ++TT  K VT 
Sbjct: 228 -HSIQAELRRLLKSKPYENCLLVLL-------NVQNAKAWNAFNLSCKILLTTRFKQVTD 279

Query: 282 LLSYLIFT--------KPLTEQHGTGLLLIAMGITLKLLPADDKPIKRTATSSFKVNIR 332
            LS    T          LT      LLL  +    + LP +         S    +IR
Sbjct: 280 FLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIR 338

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	350
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.58
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.19
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.08
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	97.86

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.58  E-value=1e-07  Score=77.81  Aligned_cols=70  Identities=16%  Similarity=0.144  Sum_probs=51.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcHHHHHHH-HhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhccC
Q 018776          245 FEAMATFIGQVSVLSLIALFGAATTAMV-TTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPA  314 (350)
Q Consensus       245 l~~~~~~l~~~~~~~~i~~~sa~t~sv~-~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~~k  314 (350)
                      ++.+++.++++++..++++.++.++..+ ..+.|+++.++|+++|||++|+.+++|+++++.|+.+.+..+
T Consensus        35 l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            4456677888999999999999988777 899999999999999999999999999999999999987653

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.19  E-value=1e-05  Score=63.34  Aligned_cols=69  Identities=16%  Similarity=0.171  Sum_probs=60.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhcHHHHHHH-HhHHHHHHHHHHHHhcCCCcchhhhhhHHHHHHHHHHHhccC
Q 018776          246 EAMATFIGQVSVLSLIALFGAATTAMV-TTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPA  314 (350)
Q Consensus       246 ~~~~~~l~~~~~~~~i~~~sa~t~sv~-~~l~~v~~i~ls~~lfge~~t~~~~iG~~lvl~Gv~ly~~~k  314 (350)
                      +.++..++++++..++++.+..++..+ ..+.++.+.++|+++|||++|+.+++|+++++.|+.+....+
T Consensus        36 ~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            344556778888899999999998777 899999999999999999999999999999999999987653

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.08  E-value=1.4e-05  Score=62.56  Aligned_cols=68  Identities=10%  Similarity=0.202  Sum_probs=60.9

Q ss_pred             HHHHHhhHHHHHhhhhcCchhHHHHH-hhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHHhccC
Q 018776           91 SAVLMGSHGLTKGSLAFLNYPAQLMF-KSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLAD  160 (350)
Q Consensus        91 s~~~~~~~~l~~~al~~~s~~~~~v~-ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~~~  160 (350)
                      .+++..+..+...+++++|.+..-.+ .+..|+.+.++++++  ++|++++.+++++.++++|+.+....+
T Consensus        37 ~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~--~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGF--FGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            34577888899999999999987655 899999999999999  999999999999999999999987754

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=97.86  E-value=1.3e-05  Score=65.21  Aligned_cols=67  Identities=10%  Similarity=0.214  Sum_probs=49.0

Q ss_pred             HHHHhhHHHHHhhhhcCchhHHHHH-hhcchHHHHHHHHhhccCccccChhhHHHHHHHHHHHHHHhccC
Q 018776           92 AVLMGSHGLTKGSLAFLNYPAQLMF-KSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLAD  160 (350)
Q Consensus        92 ~~~~~~~~l~~~al~~~s~~~~~v~-ks~~pi~v~il~~l~~~l~~r~~~~~~~~v~l~~~Gv~l~~~~~  160 (350)
                      +++.++..+.+.+++++|.+....+ .+..|++++++++++  ++|++++.++++++++++|+.+....+
T Consensus        38 ~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~--lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGF--FGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHH--HC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            4577888999999999999966555 899999999999999  999999999999999999999987654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00