Citrus Sinensis ID: 018814

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350
Protein Sequence
MASNSSKSPMLPVSEPARGDEGEKERLLKGDEKLFRGSAMTRRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKLVGK
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHcHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHEEEEccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccccHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccEEccccccccccccccccccHHHHHHHccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHEEEccc
Coil and Loop (DISEMBL)
masnsskspmlpvsepargdegekerllkgdeklfrgSAMTRRGANAAISYMACAVLLVMFNKAalssynfpCANVITLLQMISSCSFLYFLRRWKIINftmgdslmtsdssstfvplktLMHTLPLAVAYLLYMVVSVEsvrgvnvpmyttLRRTTVAFTMIMEYFLAgqkytppvvgsVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIgkssglnsfglmwcngvicgpLLLLWTFLRGdlettinfpyllspGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWilfgglpfdFLNVFGQLLGFLGSGLYAYYKLVGK
Flexible Loop (DISEMBL)
masnsskspmlpvsepargdegekerllkgdeklfrgsAMTRRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVEsvrgvnvpmyttLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKLVGK
Low Complexity Region (SEG)
MASNSSKSPMLPVSEPARGDEGEKERLLKGDEKLFRGSAMTRRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMvvsvesvrgvnvPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVfgqllgflgsglYAYYKLVGK
Disordered region (IsUnstruct)
******************************************RGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKLV**
Disordered Region (DISOPRED)
*********************************************NAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIG***GLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKLVG*
Disordered Region (DISEMBL)
************************ERLLKGDEKLFRGSAMTRRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKLVGK
Disordered Region (DISPRO)
*************************************SAMTRRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKLVG*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASNSSKSPMLPVSEPARGDEGEKERLLKGDEKLFRGSAMTRRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKLVGK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	350	2.2.26 [Sep-21-2011]
Q18779	329	UDP-sugar transporter sqv	yes	no	0.828	0.881	0.335	2e-30
Q9NTN3	355	UDP-glucuronic acid/UDP-N	yes	no	0.897	0.884	0.293	2e-30
Q15B89	343	UDP-N-acetylglucosamine/U	yes	no	0.897	0.915	0.290	5e-30
Q5RDC9	355	UDP-N-acetylglucosamine/U	yes	no	0.897	0.884	0.290	6e-30
A2VE55	355	UDP-N-acetylglucosamine/U	yes	no	0.897	0.884	0.287	2e-29
Q95YI5	373	UDP-sugar transporter UST	yes	no	0.9	0.844	0.289	5e-29
Q54YK1	382	Putative UDP-sugar transp	no	no	0.808	0.740	0.250	5e-26
Q76EJ3	337	UDP-N-acetylglucosamine/U	no	no	0.777	0.807	0.301	4e-24
Q762D5	326	UDP-N-acetylglucosamine/U	yes	no	0.777	0.834	0.294	4e-23
Q5M8T2	416	Solute carrier family 35	no	no	0.842	0.709	0.271	7e-14

>sp|Q18779|SQV7_CAEEL UDP-sugar transporter sqv-7 OS=Caenorhabditis elegans GN=sqv-7 PE=1 SV=1

 Score =  133 bits (335), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/307 (33%), Positives = 160/307 (52%), Gaps = 17/307 (5%)

Query: 47  AAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSL 106
           +A+ Y   +VL+V  NK  L++Y FP    + + QM+++   L+F + ++I+ F      
Sbjct: 15  SAVFYGVISVLIVFVNKILLTNYKFPSFLFVGVGQMMATILILFFAKMFRIVQFP----- 69

Query: 107 MTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEY 166
            + DSS   +P K +    PL + Y   ++  +   + +N+PM+T LRR ++  TMI+E+
Sbjct: 70  -SLDSS---IPRKIM----PLPLLYFFNLISGLGGTQMINLPMFTVLRRFSILMTMILEF 121

Query: 167 FLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKS 226
           ++   K +  V  SVGL+I G+F+A   DLSFD  GY ++F+ NI TA       +   +
Sbjct: 122 YILNVKASKAVKISVGLMIGGSFIAAIYDLSFDALGYTMIFINNICTAALGVYTKQKLDA 181

Query: 227 SGLNSFGLMWCNGV-ICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCF--SCILAFF 283
             L  +GLM+ N + +  P L +  +  GDL+   +F    S    V  CF  SCI  F 
Sbjct: 182 KDLGKYGLMFYNCLFMLLPALCVVQY-TGDLDRAYSFMLSDSMTSSVWTCFLLSCICGFV 240

Query: 284 LNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYA 343
           LNYS+ L T  NSA+T T  G +K+LF   +G    G   F + N  G  +   GS LY 
Sbjct: 241 LNYSLVLCTHHNSALTTTCVGPIKNLFVTYVGMFSSGDYVFQWANFTGINVSVFGSILYT 300

Query: 344 YYKLVGK 350
           Y     K
Sbjct: 301 YVTFRSK 307

Involved in the import of UDP-glucuronic acid (UDP-GlcA), UDP-N-acetylgalactosamine (UDP-GalNAc) and UDP-galactose (UDP-Gal) from the cytoplasm into the Golgi lumen for the biosynthesis of glycoconjugates that play a pivotal role in development.
Caenorhabditis elegans (taxid: 6239)

>sp|Q9NTN3|S35D1_HUMAN UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter OS=Homo sapiens GN=SLC35D1 PE=1 SV=1

 Score =  133 bits (334), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 164/330 (49%), Gaps = 16/330 (4%)

Query: 18  RGDEGEKERLLKGDEKLFRGSAMTRR---GANAAISYMACAVLLVMFNKAALSSYNFPCA 74
           +G+   K   L+ +E+L   SA T        AA  Y   + L+V+ NK+ L++Y FP +
Sbjct: 13  KGEAPAKSSTLRDEEELGMASAETLTVFLKLLAAGFYGVSSFLIVVVNKSVLTNYRFPSS 72

Query: 75  NVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLY 134
             + L QM+++ + L+  +  +++ F   D           VP KT     PL + Y   
Sbjct: 73  LCVGLGQMVATVAVLWVGKALRVVKFPDLDR---------NVPRKTF----PLPLLYFGN 119

Query: 135 MVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR 194
            +  + S + +N+PM+T LRR ++ FTM  E  L  + ++  +  +V  +I+GAFVA + 
Sbjct: 120 QITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLLKKTFSWGIKMTVFAMIIGAFVAASS 179

Query: 195 DLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRG 254
           DL+FD  GYA + + ++ TA   A + +   S  L  +GL++ N +      L   +  G
Sbjct: 180 DLAFDLEGYAFILINDVLTAANGAYVKQKLDSKELGKYGLLYYNALFMILPTLAIAYFTG 239

Query: 255 DLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGL 314
           D +  + F       FL+    SC++ F L Y+  L T  NSA+T TI G +K++    +
Sbjct: 240 DAQKAVEFEGWADTLFLLQFTLSCVMGFILMYATVLCTQYNSALTTTIVGCIKNILITYI 299

Query: 315 GWILFGGLPFDFLNVFGQLLGFLGSGLYAY 344
           G +  G   F + N  G  +   GS +Y+Y
Sbjct: 300 GMVFGGDYIFTWTNFIGLNISIAGSLVYSY 329

Transports both UDP-glucuronic acid (UDP-GlcA) and UDP-N-acetylgalactosamine (UDP-GalNAc) from the cytoplasm to into the endoplasmic reticulum lumen. May participate in glucuronidation and/or chondroitin sulfate biosynthesis.

Homo sapiens (taxid: 9606)

>sp|Q15B89|S35D2_PIG UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter (Fragment) OS=Sus scrofa GN=SLC35D2 PE=2 SV=1

 Score =  132 bits (331), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 164/330 (49%), Gaps = 16/330 (4%)

Query: 18  RGDEGEKERLLKGDEKLFRGSAMTRR---GANAAISYMACAVLLVMFNKAALSSYNFPCA 74
           +G+   K    + DE+L   SA T        AA  Y   + L+V+ NK+ L++Y FP +
Sbjct: 1   KGEAPAKSSTHRHDEELGMASAETLTVFLKLLAAGFYGVSSFLIVVVNKSVLTNYRFPSS 60

Query: 75  NVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLY 134
             + L QM+++ + L+  +  +++ F   D           VP KT     PL + Y   
Sbjct: 61  LCVGLGQMVATVAVLWVGKALRVVKFPDFDR---------NVPRKTF----PLPLLYFGN 107

Query: 135 MVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR 194
            +  + S + +N+PM+T LRR ++ FTM  E  L  + ++  +  +V  +I+GAFVA + 
Sbjct: 108 QITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLLKKTFSWGIKMTVFAMIIGAFVAASS 167

Query: 195 DLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRG 254
           DL+FD  GY  + + ++ TA   A + +   S  L  +GL++ N +      L   ++ G
Sbjct: 168 DLAFDLEGYVFILINDVLTAANGAYVKQKLDSKELGKYGLLYYNALFMILPTLAIAYITG 227

Query: 255 DLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGL 314
           D +  ++F       FL+    SC++ F L Y+  L T  NSA+T TI G +K++    +
Sbjct: 228 DAQKAMDFEGWADTLFLLQFTLSCVMGFILMYATVLCTQYNSALTTTIVGCIKNILITYI 287

Query: 315 GWILFGGLPFDFLNVFGQLLGFLGSGLYAY 344
           G +  G   F + N  G  +   GS +Y+Y
Sbjct: 288 GMVFGGDYIFTWTNFIGLNISIAGSLVYSY 317

Antiporter transporting nucleotide sugars such as UDP-N-acetylglucosamine (UDP-GlcNAc), UDP-glucose (UDP-Glc) and GDP-mannose (GDP-Man) pooled in the cytosol into the lumen of the Golgi in exchange for the corresponding nucleosides monophosphates (UMP for UDP-sugars and GMP for GDP-sugars). May take part in heparan sulfate synthesis by supplying UDP-Glc-NAc, the donor substrate, and thus be involved in growth factor signaling.

Sus scrofa (taxid: 9823)

>sp|Q5RDC9|S35D2_PONAB UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter OS=Pongo abelii GN=SLC35D2 PE=2 SV=1

 Score =  131 bits (330), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 163/330 (49%), Gaps = 16/330 (4%)

Query: 18  RGDEGEKERLLKGDEKLFRGSAMTRR---GANAAISYMACAVLLVMFNKAALSSYNFPCA 74
           +G+   K   L+ +E+L   SA T        AA  Y   + L+V+ NK+ L++Y FP +
Sbjct: 13  KGEAPAKSSTLRDEEELGMASAETLTVFLKLLAAGFYGVSSFLIVVVNKSVLTNYRFPSS 72

Query: 75  NVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLY 134
             + L QM+++ + L+  +  +++ F   D           VP KT     PL + Y   
Sbjct: 73  LCVGLGQMVATVAVLWVGKALRVVKFPDLDR---------NVPRKTF----PLPLLYFGN 119

Query: 135 MVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR 194
            +  + S + +N+PM+T LRR ++ FTM  E  L  + ++  +  +V  +I+GAFVA + 
Sbjct: 120 QITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLLKKTFSWGIKMTVFAMIIGAFVAASS 179

Query: 195 DLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRG 254
           DL+FD  GY  + + ++ TA   A + +   S  L  +GL++ N +      L   +  G
Sbjct: 180 DLAFDLEGYVFILINDVLTAANGAYVKQKLDSKELGKYGLLYYNALFMILPTLAIAYFTG 239

Query: 255 DLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGL 314
           D +  + F       FL+    SC++ F L Y+  L T  NSA+T TI G +K++    +
Sbjct: 240 DAQKAVEFEGWADTLFLLQFTLSCVMGFILMYATVLCTQYNSALTTTIVGCIKNILITYI 299

Query: 315 GWILFGGLPFDFLNVFGQLLGFLGSGLYAY 344
           G +  G   F + N  G  +   GS +Y+Y
Sbjct: 300 GMVFGGDYIFTWTNFIGLNISIAGSLVYSY 329

Antiporter transporting nucleotide sugars such as UDP-N-acetylglucosamine (UDP-GlcNAc), UDP-glucose (UDP-Glc) and GDP-mannose (GDP-Man) pooled in the cytosol into the lumen of the Golgi in exchange for the corresponding nucleosides monophosphates (UMP for UDP-sugars and GMP for GDP-sugars). May take part in heparan sulfate synthesis by supplying UDP-Glc-NAc, the donor substrate, and thus be involved in growth factor signaling.

Pongo abelii (taxid: 9601)

>sp|A2VE55|S35D2_BOVIN UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter OS=Bos taurus GN=SLC35D2 PE=2 SV=1

 Score =  129 bits (325), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 163/330 (49%), Gaps = 16/330 (4%)

Query: 18  RGDEGEKERLLKGDEKLFRGSAMTRR---GANAAISYMACAVLLVMFNKAALSSYNFPCA 74
           +G+   K    + +E+L   SA T        AA  Y   + L+V+ NK+ L++Y FP +
Sbjct: 13  KGEAPAKSSTHRHEEELGMASAETLTVFLKLLAAGFYGVSSFLIVVVNKSVLTNYRFPSS 72

Query: 75  NVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLY 134
             + L QM+++ + L+  +  +++ F   D           VP KT     PL + Y   
Sbjct: 73  LCVGLGQMVATVAVLWVGKALRVVKFPDFDR---------NVPRKTF----PLPLLYFGN 119

Query: 135 MVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR 194
            +  + S + +N+PM+T LRR ++ FTM  E  L  + ++  +  +V  +I+GAFVA + 
Sbjct: 120 QITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLLKKTFSWGIKMTVFAMIIGAFVAASS 179

Query: 195 DLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRG 254
           DL+FD  GY  + + ++ TA   A + +   S  L  +GL++ N +      L   +  G
Sbjct: 180 DLAFDLEGYVFILINDVLTAANGAYVKQKLDSKELGKYGLLYYNALFMILPTLAIAYFTG 239

Query: 255 DLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGL 314
           D +  ++F       FL+    SC++ F L Y+  L T  NSA+T TI G +K++    +
Sbjct: 240 DAQKALDFEGWADTLFLLQFTLSCVMGFILMYATVLCTQYNSALTTTIVGCIKNILITYI 299

Query: 315 GWILFGGLPFDFLNVFGQLLGFLGSGLYAY 344
           G +  G   F + N  G  +   GS +Y+Y
Sbjct: 300 GMVFGGDYIFTWTNFIGLNISIAGSLVYSY 329

Antiporter transporting nucleotide sugars such as UDP-N-acetylglucosamine (UDP-GlcNAc), UDP-glucose (UDP-Glc) and GDP-mannose (GDP-Man) pooled in the cytosol into the lumen of the Golgi in exchange for the corresponding nucleosides monophosphates (UMP for UDP-sugars and GMP for GDP-sugars). May take part in heparan sulfate synthesis by supplying UDP-GlcNAc, the donor substrate, and thus be involved in growth factor signaling.

Bos taurus (taxid: 9913)

>sp|Q95YI5|US74C_DROME UDP-sugar transporter UST74c OS=Drosophila melanogaster GN=frc PE=1 SV=2

 Score =  128 bits (322), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 162/338 (47%), Gaps = 23/338 (6%)

Query: 15  EPARGDEGEKERLLKGD------EKLFRGSAMTRRGANAAISYMACAVLLVMFNKAALSS 68
           E   G   ++  LL G        +    SA+  +   +A+ Y   + ++ + NK  L+S
Sbjct: 28  EEKMGGSADRSSLLDGSGSKELSHREREDSALFVKKIGSALFYGLSSFMITVVNKTVLTS 87

Query: 69  YNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLK--TLMHTLP 126
           Y+FP    ++L Q+ +S   L   +R K++NF                PL+  T     P
Sbjct: 88  YHFPSFLFLSLGQLTASIVVLGMGKRLKLVNFP---------------PLQRNTFAKIFP 132

Query: 127 LAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIIL 186
           L + +L  M+  +   + +++PM+  LRR ++  TM++E  + G + +  V  SV  +I 
Sbjct: 133 LPLIFLGNMMFGLGGTKTLSLPMFAALRRFSILMTMLLELKILGLRPSNAVQVSVYAMIG 192

Query: 187 GAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLL 246
           GA +A + DLSF+  GY  V + N  TA     + +   +S +  +GLM+ N +      
Sbjct: 193 GALLAASDDLSFNMRGYIYVMITNALTASNGVYVKKKLDTSEIGKYGLMYYNSLFMFLPA 252

Query: 247 LLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNL 306
           L   ++ G+L+  +NF       F+V    SC++ F L+YS  L T  NSA+T TI G L
Sbjct: 253 LALNYVTGNLDQALNFEQWNDSVFVVQFLLSCVMGFILSYSTILCTQFNSALTTTIVGCL 312

Query: 307 KDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAY 344
           K++    LG  + G   F +LN  G  +  L S LY Y
Sbjct: 313 KNICVTYLGMFIGGDYVFSWLNCIGINISVLASLLYTY 350

Involved in the import of UDP-sugars from the cytoplasm into the Golgi lumen.

Drosophila melanogaster (taxid: 7227)

>sp|Q54YK1|Y8631_DICDI Putative UDP-sugar transporter DDB_G0278631 OS=Dictyostelium discoideum GN=DDB_G0278631 PE=3 SV=2

 Score =  119 bits (297), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 82/327 (25%), Positives = 167/327 (51%), Gaps = 44/327 (13%)

Query: 20  DEGEKERLLKGDEKLFRGSAMT-------------RRGANA----AISYMAC-------A 55
           D+ EK ++   DE +F+                   RG+N+     I++          A
Sbjct: 48  DDNEKMKI-SEDESIFKSINNDNKNQQNDNIINSFNRGSNSFLFNIINFYKSPRFLSGGA 106

Query: 56  VLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTF 115
           VLL +     +++Y+F  +N +   QM+ +   L+ L+ + I+              +T 
Sbjct: 107 VLLYV-----MTTYDFSASNFLLFNQMVVTIVILHILKHFNILKI------------NTN 149

Query: 116 VPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTP 175
              +T+   +PL+  Y++ +++ ++S++ +N+PMY+ L+R      ++MEYF+  +   P
Sbjct: 150 FEKETIKKLMPLSFCYIINVLLGLDSLKQLNIPMYSALKRLVAVVILVMEYFILKKVSPP 209

Query: 176 PVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLM 235
            ++ SV ++++GA VAG  DLSF+  GY++V L+ I  A YL  + ++   S ++++ ++
Sbjct: 210 KIIASVVVMVIGAVVAGITDLSFNSLGYSLVLLSCIFQASYLIYVKKVA--SNMSTYDML 267

Query: 236 WCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLN 295
           + N V+  P+ +    +  ++E    F +L    F      S  L FFLN+ IF  T++N
Sbjct: 268 YYNSVLSLPITIFLMIVNQEIEYFQTFEHLYDSSFQAYFILSIFLGFFLNFCIFFCTSVN 327

Query: 296 SAVTQTICGNLKDLFTIGLGWILFGGL 322
           S +T ++ G +K++ +  +G ++F  +
Sbjct: 328 SPLTTSVTGQVKNIASTIIGAMVFNDI 354

May be nvolved in the import of UDP-sugars.

Dictyostelium discoideum (taxid: 44689)

>sp|Q76EJ3|S35D2_HUMAN UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter OS=Homo sapiens GN=SLC35D2 PE=1 SV=1

 Score =  112 bits (281), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 144/285 (50%), Gaps = 13/285 (4%)

Query: 47  AAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSL 106
           +A+ Y  C+ L+V+ NKA L++Y FP    + + QM ++   LY  +  KII+F   D  
Sbjct: 30  SALFYGTCSFLIVLVNKALLTTYGFPSPIFLGIGQMAATIMILYVSKLNKIIHFPDFDKK 89

Query: 107 MTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEY 166
                    +P+K      PL + Y+   +  + S   +++PM+T LR+ T+  T+++E 
Sbjct: 90  ---------IPVKLF----PLPLLYVGNHISGLSSTSKLSLPMFTVLRKFTIPLTLLLET 136

Query: 167 FLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKS 226
            + G++Y+  ++ SV  IILGAF+A   DL+F+  GY  VFL +I TA       +    
Sbjct: 137 IILGKQYSLNIILSVFAIILGAFIAAGSDLAFNLEGYIFVFLNDIFTAANGVYTKQKMDP 196

Query: 227 SGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNY 286
             L  +G+++ N        L+ +   GDL+    F    +  F++    SC L F L Y
Sbjct: 197 KELGKYGVLFYNACFMIIPTLIISVSTGDLQQATEFNQWKNVVFILQFLLSCFLGFLLMY 256

Query: 287 SIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFG 331
           S  L +  NSA+T  + G +K++    +G ++ G   F  LN  G
Sbjct: 257 STVLCSYYNSALTTAVVGAIKNVSVAYIGILIGGDYIFSLLNFVG 301

Antiporter transporting nucleotide sugars such as UDP-N-acetylglucosamine (UDP-GlcNAc), UDP-glucose (UDP-Glc) and GDP-mannose (GDP-Man) pooled in the cytosol into the lumen of the Golgi in exchange for the corresponding nucleosides monophosphates (UMP for UDP-sugars and GMP for GDP-sugars). May take part in heparan sulfate synthesis by supplying UDP-Glc-NAc, the donor substrate, and thus be involved in growth factor signaling.

Homo sapiens (taxid: 9606)

>sp|Q762D5|S35D2_MOUSE UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter OS=Mus musculus GN=Slc35d2 PE=2 SV=1

 Score =  108 bits (271), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 143/285 (50%), Gaps = 13/285 (4%)

Query: 47  AAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSL 106
           +A+ Y  C+ L+V+ NKA L++Y FP   V+ + QM ++   LY  +  KII+F   D  
Sbjct: 18  SALFYGTCSFLIVLVNKALLTTYGFPSPIVLGIGQMATTIMILYVFKLNKIIHFPDFDK- 76

Query: 107 MTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEY 166
                       K      PL + Y+   +  + S   +++PM+T LR+ T+ FT+++E 
Sbjct: 77  ------------KIPGKLFPLPLLYVGNHISGLSSTSKLSLPMFTVLRKFTIPFTLLLEA 124

Query: 167 FLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKS 226
            + G +Y+  ++ SV  I+LGAF+A   DL+F+  GY  VFL +I TA       +    
Sbjct: 125 IILGTQYSLNIILSVLAIVLGAFIAAGSDLTFNLEGYVFVFLNDIFTAANGVYTKQKMDP 184

Query: 227 SGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNY 286
             L  +G+++ N        ++ +   GD +    F +  +  F++    SC+L F L Y
Sbjct: 185 KELGKYGVLFYNACFMLIPTVIISVSTGDFQQATEFRHWKNVLFIIQFLLSCLLGFLLMY 244

Query: 287 SIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFG 331
           S  L +  NSA+T  + G +K++    +G ++ G   F  LN  G
Sbjct: 245 STALCSYYNSALTTAVVGAIKNVSVAYIGMLVGGDYIFSLLNFIG 289

Antiporter transporting nucleotide sugars such as UDP-N-acetylglucosamine (UDP-GlcNAc), UDP-glucose (UDP-Glc) and GDP-mannose (GDP-Man) pooled in the cytosol into the lumen of the Golgi in exchange for the corresponding nucleosides monophosphates (UMP for UDP-sugars and GMP for GDP-sugars). May take part in heparan sulfate synthesis by supplying UDP-Glc-NAc, the donor substrate, and thus be involved in growth factor signaling.

Mus musculus (taxid: 10090)

>sp|Q5M8T2|S35D3_HUMAN Solute carrier family 35 member D3 OS=Homo sapiens GN=SLC35D3 PE=2 SV=1

 Score = 78.6 bits (192), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 142/320 (44%), Gaps = 25/320 (7%)

Query: 32  EKLFRGSAMTRRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSF--- 88
            +L RG  +   G + AI++   +  L +  K  +S Y F   + +TL+Q ++S +    
Sbjct: 2   RQLCRGRVL---GISVAIAHGVFSGSLNILLKFLISRYQF---SFLTLVQCLTSSTAALS 55

Query: 89  LYFLRRWKIINFT-MGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNV 147
           L  LRR  +I     G SL  S +      L TL  +L L             S+RG+++
Sbjct: 56  LELLRRLGLIAVPPFGLSLARSFAGVAV--LSTLQSSLTLW------------SLRGLSL 101

Query: 148 PMYTTLRRTTVAFTMIMEYF-LAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVV 206
           PMY   +R     TM++    L     +P V+ +V +   GA +AGA DL+ D  GY   
Sbjct: 102 PMYVVFKRCLPLVTMLIGVLVLKNGAPSPGVLAAVLITTCGAALAGAGDLTGDPIGYVTG 161

Query: 207 FLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLL 266
            LA +  A YL  I +    +        +   V   PLL++ +F   D      FP   
Sbjct: 162 VLAVLVHAAYLVLIQKASADTEHGPLTAQYVIAVSATPLLVICSFASTDSIHAWTFPGWK 221

Query: 267 SPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDF 326
            P  + +     ++   +N++    T +NSAVT +  G +K + TI +G + F  +    
Sbjct: 222 DPAMVCIFVACILIGCAMNFTTLHCTYINSAVTTSFVGVVKSIATITVGMVAFSDVEPTS 281

Query: 327 LNVFGQLLGFLGSGLYAYYK 346
           L + G ++  LGS +Y   K
Sbjct: 282 LFIAGVVVNTLGSIIYCVAK 301

May play a role in hemostasis as a regulator of the biosynthesis of platelet-dense granules.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	350
449437148	353	PREDICTED: UDP-N-acetylglucosamine/UDP-g	0.985	0.977	0.777	1e-156
224089268	354	predicted protein [Populus trichocarpa]	1.0	0.988	0.790	1e-154
225430308	340	PREDICTED: UDP-sugar transporter UST74c	0.965	0.994	0.767	1e-154
363807086	345	uncharacterized protein LOC100819763 [Gl	0.971	0.985	0.755	1e-151
255548892	356	UDP-sugar transporter, putative [Ricinus	0.925	0.910	0.796	1e-151
357436995	346	UDP-N-acetylglucosamine/UDP-glucose/GDP-	0.968	0.979	0.754	1e-150
356552517	345	PREDICTED: UDP-glucuronic acid/UDP-N-ace	0.971	0.985	0.747	1e-149
145334197	344	UDP-sugar transporter-like protein [Arab	0.974	0.991	0.733	1e-145
297798730	342	hypothetical protein ARALYDRAFT_491505 [	0.96	0.982	0.728	1e-145
356515388	347	PREDICTED: UDP-glucuronic acid/UDP-N-ace	0.974	0.982	0.742	1e-143

>gi|449437148|ref|XP_004136354.1| PREDICTED: UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter-like [Cucumis sativus] gi|449520181|ref|XP_004167112.1| PREDICTED: UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter-like [Cucumis sativus]

 Score =  557 bits (1436), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 273/351 (77%), Positives = 314/351 (89%), Gaps = 6/351 (1%)

Query: 3   SNSSKSPMLPVSEPARGDEGEKERLLKGDEKLFRGSAMTRRGANAAISYMACAVLLVMFN 62
           SNS K+ MLPVS+P  G E EKERL++GDEKLFRGS+MT+RGA AA+SYMACAVLLV+FN
Sbjct: 6   SNSEKNLMLPVSDPPHGTE-EKERLIRGDEKLFRGSSMTKRGAYAALSYMACAVLLVLFN 64

Query: 63  KAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLM 122
           KAALSSYNFP ANV+TL+QM+ SCSFLY LRRWKII+FT+GDS   SD++++ VP+KTL 
Sbjct: 65  KAALSSYNFPSANVVTLVQMVCSCSFLYALRRWKIISFTVGDSF--SDNATSMVPMKTLR 122

Query: 123 HTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVG 182
            T PLA  YLLYM+ ++ESVRGVNVPMYTTLRRTTV FTM++EY LAGQKYT  VVGSVG
Sbjct: 123 QTSPLAGTYLLYMLATMESVRGVNVPMYTTLRRTTVVFTMVVEYLLAGQKYTYSVVGSVG 182

Query: 183 LIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVIC 242
           LI+LGAF+AGARDLSFD +GY++VF++NITTAIYLATI+RIGKSSGLNSFGLMWCNGV+C
Sbjct: 183 LIVLGAFIAGARDLSFDVYGYSIVFMSNITTAIYLATISRIGKSSGLNSFGLMWCNGVLC 242

Query: 243 GPLLLLWTFLRGDLETTINFPYLLSPGFL---VVLCFSCILAFFLNYSIFLNTTLNSAVT 299
            P+LL WTF+RGDLE TI+FP+L SPGFL   VV+  SC LAFFLNYSIFLNTTLNSAVT
Sbjct: 243 APVLLFWTFIRGDLEATISFPHLFSPGFLVSRVVMFCSCTLAFFLNYSIFLNTTLNSAVT 302

Query: 300 QTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKLVGK 350
           QTICGNLKDLFTIGLGW++FGGLPFD LNV GQLLGF+GSGLYAYYKL+GK
Sbjct: 303 QTICGNLKDLFTIGLGWMIFGGLPFDLLNVIGQLLGFIGSGLYAYYKLIGK 353

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224089268|ref|XP_002308668.1| predicted protein [Populus trichocarpa] gi|222854644|gb|EEE92191.1| predicted protein [Populus trichocarpa]

 Score =  550 bits (1418), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 280/354 (79%), Positives = 311/354 (87%), Gaps = 4/354 (1%)

Query: 1   MASNSSKSPMLPVSEPARGDEG--EKERLLKGDEKLFRGSAMTRRGANAAISYMACAVLL 58
           MAS+SS + +LPVS     DE   EKERL+KGDEK FRGS+MT+RGA AAISYM+CAVLL
Sbjct: 1   MASSSSSNSILPVSVSPLDDERQREKERLIKGDEKAFRGSSMTKRGAYAAISYMSCAVLL 60

Query: 59  VMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPL 118
           V+FNKAALSSYNFP ANVITL QMI SCSFLY LRRW+II+FT G SL TSD ++TFVPL
Sbjct: 61  VLFNKAALSSYNFPSANVITLFQMICSCSFLYALRRWRIISFTDGGSLTTSDVNATFVPL 120

Query: 119 KTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVV 178
           +TLMHTLPLA+ YLLYM+V++ESVRGVNVPMYTTLRRTTV FTMIMEY LAGQ+YT P+ 
Sbjct: 121 ETLMHTLPLALTYLLYMLVTMESVRGVNVPMYTTLRRTTVVFTMIMEYILAGQRYTRPIF 180

Query: 179 GSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIG-KSSGLNSFGLMWC 237
           GSVGLI+LGAF+AGARDLSFDF+GYAVVF AN TTAIYLATI+RIG KSSGLNSFGLMWC
Sbjct: 181 GSVGLIVLGAFIAGARDLSFDFYGYAVVFAANFTTAIYLATISRIGRKSSGLNSFGLMWC 240

Query: 238 NGVICGPLLLLWTFLRGDLETTINFPYLLSPGFL-VVLCFSCILAFFLNYSIFLNTTLNS 296
           NG+ICGP+LL WTF+RGDL  T+NFPYL S GFL  VL  SCILAFFLNYSIFLNTTLNS
Sbjct: 241 NGIICGPVLLFWTFIRGDLGMTMNFPYLFSLGFLQAVLLLSCILAFFLNYSIFLNTTLNS 300

Query: 297 AVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKLVGK 350
           A+TQTICGNLKDLFTI LGW +FGGLPFDF NV GQ LGF GSGLYAYYKL+G+
Sbjct: 301 ALTQTICGNLKDLFTIALGWTIFGGLPFDFFNVIGQCLGFAGSGLYAYYKLIGR 354

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225430308|ref|XP_002285174.1| PREDICTED: UDP-sugar transporter UST74c [Vitis vinifera]

 Score =  549 bits (1415), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 268/349 (76%), Positives = 307/349 (87%), Gaps = 11/349 (3%)

Query: 2   ASNSSKSPMLPVSEPARGDEGEKERLLKGDEKLFRGSAMTRRGANAAISYMACAVLLVMF 61
           +SNSSKSPMLP+S+P R D+           K+F+GSAM++RGA AAISYM+CAVLLV+F
Sbjct: 3   SSNSSKSPMLPISDPPRPDD-----------KVFKGSAMSKRGAYAAISYMSCAVLLVIF 51

Query: 62  NKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTL 121
           NKAALSSY+FPCA+VITL Q+I SCSFLY LRRWKII+FT+G+S   +D S  FVP+ TL
Sbjct: 52  NKAALSSYHFPCASVITLFQIICSCSFLYALRRWKIISFTLGESSNVNDGSPVFVPITTL 111

Query: 122 MHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSV 181
           +HTLPLA+ YLLYM+V++ESVRGVNVPMYTTLRRTTV FTM +EY LAGQ+YT  VVGSV
Sbjct: 112 IHTLPLAITYLLYMLVTMESVRGVNVPMYTTLRRTTVVFTMFVEYILAGQRYTSSVVGSV 171

Query: 182 GLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVI 241
           GLI+LGAF+AGARDLSFD +GYAVVFL+NITTAIYLATIARIGKSSGLNSFGLMWCNG++
Sbjct: 172 GLIVLGAFIAGARDLSFDSYGYAVVFLSNITTAIYLATIARIGKSSGLNSFGLMWCNGIL 231

Query: 242 CGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQT 301
           CGP+LLLWTF+RGDL   +NFP+   PGFLVVL  SCILAFFLNYSIFLNTTLNSAVTQT
Sbjct: 232 CGPILLLWTFIRGDLGMAMNFPHFFLPGFLVVLLLSCILAFFLNYSIFLNTTLNSAVTQT 291

Query: 302 ICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKLVGK 350
           ICGNLKDLFTIGLGW++FGGLPFD LN+ GQ LGFLGSGLYAYYKL+GK
Sbjct: 292 ICGNLKDLFTIGLGWMIFGGLPFDILNITGQFLGFLGSGLYAYYKLIGK 340

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363807086|ref|NP_001242077.1| uncharacterized protein LOC100819763 [Glycine max] gi|255641342|gb|ACU20948.1| unknown [Glycine max]

 Score =  541 bits (1395), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 263/348 (75%), Positives = 305/348 (87%), Gaps = 8/348 (2%)

Query: 3   SNSSKSPMLPVSEPARGDEGEKERLLKGDEKLFRGSAMTRRGANAAISYMACAVLLVMFN 62
           SNSS++ MLPVS+P +  +         D+KLF+GSAMT+RGA AA+SYM+CAVLLVMFN
Sbjct: 6   SNSSENLMLPVSDPPKSHDA--------DDKLFKGSAMTKRGAFAAVSYMSCAVLLVMFN 57

Query: 63  KAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLM 122
           KAALSSYNFP ANVITLLQM+ S  FLY LRRW++I+F+ G+SL  SD+S+ FV LKTL 
Sbjct: 58  KAALSSYNFPSANVITLLQMVCSRCFLYLLRRWRMISFSTGESLHISDNSTKFVSLKTLK 117

Query: 123 HTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVG 182
           HTLPL+ AYL YM+V++ESVRGVNVPMYTTLRRTTV FTM++E+ L GQ+YTP V+ SVG
Sbjct: 118 HTLPLSGAYLFYMLVTMESVRGVNVPMYTTLRRTTVVFTMLVEFVLVGQRYTPSVIFSVG 177

Query: 183 LIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVIC 242
           LI+ GAFVAGARDLSFD +GYAVVF++NI TAIYLATIARIGK+SGLNSFGLMWCNG+IC
Sbjct: 178 LIVFGAFVAGARDLSFDAYGYAVVFMSNIATAIYLATIARIGKTSGLNSFGLMWCNGIIC 237

Query: 243 GPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTI 302
           GP+LL+WTF+RGDL TTINFPYL SPGF+V+L FSC+LAFFLNY IFLNTTLNSAVTQTI
Sbjct: 238 GPVLLIWTFVRGDLMTTINFPYLFSPGFIVILLFSCVLAFFLNYCIFLNTTLNSAVTQTI 297

Query: 303 CGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKLVGK 350
           CGNLKDLFTIGLGWI+FGGLPFDF N+ GQ LGF GSGLYAYYKL+GK
Sbjct: 298 CGNLKDLFTIGLGWIIFGGLPFDFWNIIGQFLGFAGSGLYAYYKLIGK 345

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255548892|ref|XP_002515502.1| UDP-sugar transporter, putative [Ricinus communis] gi|223545446|gb|EEF46951.1| UDP-sugar transporter, putative [Ricinus communis]

 Score =  540 bits (1390), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 259/325 (79%), Positives = 297/325 (91%), Gaps = 1/325 (0%)

Query: 1   MASNSSKSPMLPVSEPARGDEGEKERLLKGDEKLFRGSAMTRRGANAAISYMACAVLLVM 60
           MASNSS + +LP+S  +  D+ EKERL+KGD+K+FRGSAMT+RGA AAISYM+CAVLLV+
Sbjct: 1   MASNSSNNSILPLST-SPSDDKEKERLIKGDDKIFRGSAMTKRGAYAAISYMSCAVLLVI 59

Query: 61  FNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKT 120
           FNKAALSS+NFP ANVITL QMISS SFLY LRRW+II+FT+G+S+  SD   TFVP +T
Sbjct: 60  FNKAALSSFNFPSANVITLFQMISSVSFLYALRRWRIISFTVGESVPISDGKPTFVPFET 119

Query: 121 LMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGS 180
           LMHTLPL+ AYLLYM+V++ESVRGVNVPMYTTLRRTTVAFTM+MEYFLAGQ+YTPP+VGS
Sbjct: 120 LMHTLPLSAAYLLYMLVTMESVRGVNVPMYTTLRRTTVAFTMVMEYFLAGQRYTPPIVGS 179

Query: 181 VGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGV 240
           VG+II GAF+AGARDLSFDF+GYAVVFLANITTAIYLATI+RIG SSGLNSFGLMWCNG+
Sbjct: 180 VGVIIFGAFIAGARDLSFDFYGYAVVFLANITTAIYLATISRIGNSSGLNSFGLMWCNGI 239

Query: 241 ICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQ 300
           +CGP+LL WTF RG+LE TINFPYL +PGF+ VL  SC+LAFFLNYSIFLNTTLNSA+TQ
Sbjct: 240 LCGPVLLFWTFFRGELEMTINFPYLFTPGFMAVLLLSCLLAFFLNYSIFLNTTLNSALTQ 299

Query: 301 TICGNLKDLFTIGLGWILFGGLPFD 325
           TICGNLKDLFTIGLGWI+FGGLPFD
Sbjct: 300 TICGNLKDLFTIGLGWIIFGGLPFD 324

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357436995|ref|XP_003588773.1| UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter [Medicago truncatula] gi|355477821|gb|AES59024.1| UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter [Medicago truncatula]

 Score =  537 bits (1383), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 264/350 (75%), Positives = 306/350 (87%), Gaps = 11/350 (3%)

Query: 3   SNSSKSPMLPVSEPARGDEGEKERLLKGDEKLFRGSAMTRRGANAAISYMACAVLLVMFN 62
           SNSS+ PMLP+S+P +          + D+KLF+GSAMT+RGA AAISYM+CAVLLVMFN
Sbjct: 6   SNSSEKPMLPLSDPPKN---------QIDDKLFKGSAMTKRGAYAAISYMSCAVLLVMFN 56

Query: 63  KAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLM 122
           KAALSSYNFP ANVITLLQM+SSC FLY LRRW+II+FT  +SL+ SD+S+ FV LKTL 
Sbjct: 57  KAALSSYNFPSANVITLLQMVSSCFFLYILRRWRIISFTASESLLISDNSTKFVSLKTLK 116

Query: 123 HTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVG 182
           HT PLA AYLLYM+V++E+VRGVNVPMYTTLRRTTV FTM++E+ L GQ+YT  VV SVG
Sbjct: 117 HTFPLAGAYLLYMLVTMEAVRGVNVPMYTTLRRTTVVFTMLVEFVLVGQRYTHSVVFSVG 176

Query: 183 LIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVIC 242
           LI+ GAFVAGARDLSFD +GY+VVFLAN+TTAIYLATIARIGK+SGLNSFGLMWCNG++C
Sbjct: 177 LIVFGAFVAGARDLSFDTYGYSVVFLANVTTAIYLATIARIGKTSGLNSFGLMWCNGILC 236

Query: 243 GPLLLLWTFLRGDLETTINFPYLLSPGFLVV--LCFSCILAFFLNYSIFLNTTLNSAVTQ 300
           GP+LL+WTF+RGDL+TTI+FPYL SPGFLV   + F CILAFFLNYSIFLNTTLNSA+TQ
Sbjct: 237 GPVLLIWTFIRGDLKTTIDFPYLFSPGFLVCYFVFFLCILAFFLNYSIFLNTTLNSALTQ 296

Query: 301 TICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKLVGK 350
           TICGN+KDLFTIG GWI+FGGLPFDF NV GQ LGF GSGLYAY+KL+GK
Sbjct: 297 TICGNMKDLFTIGFGWIIFGGLPFDFWNVIGQFLGFTGSGLYAYFKLIGK 346

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356552517|ref|XP_003544613.1| PREDICTED: UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter-like [Glycine max]

 Score =  533 bits (1373), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 260/348 (74%), Positives = 303/348 (87%), Gaps = 8/348 (2%)

Query: 3   SNSSKSPMLPVSEPARGDEGEKERLLKGDEKLFRGSAMTRRGANAAISYMACAVLLVMFN 62
           SNSS++ MLPVS+P +  +         D KLF+GSAMT+RGA AA+SYM+CAVLLVMFN
Sbjct: 6   SNSSENLMLPVSDPPKTQDA--------DNKLFKGSAMTKRGAFAAVSYMSCAVLLVMFN 57

Query: 63  KAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLM 122
           KAALSSYNFP ANVITLLQM+ SC FLY LR W++I+F+ G+ L  S++SS FV LKTL 
Sbjct: 58  KAALSSYNFPSANVITLLQMVCSCCFLYLLRCWRMISFSTGEPLHISENSSKFVSLKTLK 117

Query: 123 HTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVG 182
           HTLPL+ AYL YM+V++ESVRGVNVPMYTTLRRTTV FTM++E+ L GQ+YTP V+ SVG
Sbjct: 118 HTLPLSGAYLFYMLVTMESVRGVNVPMYTTLRRTTVVFTMLVEFVLVGQRYTPSVIFSVG 177

Query: 183 LIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVIC 242
           LI+ GAFVAGARDLSFD +GYAVVF++NI TAIYLATIARIGK+SGLNSFGLMWCNG+IC
Sbjct: 178 LIVFGAFVAGARDLSFDGYGYAVVFMSNIATAIYLATIARIGKTSGLNSFGLMWCNGIIC 237

Query: 243 GPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTI 302
           GP+LL+WTF+RGDL TTINFP+L SPGF+V+L FSC+LAFFLNY IFLNTTLNSAVTQTI
Sbjct: 238 GPVLLIWTFVRGDLMTTINFPHLFSPGFIVILLFSCMLAFFLNYCIFLNTTLNSAVTQTI 297

Query: 303 CGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKLVGK 350
           CGNLKDLFTIGLGW++FGGLPFDF N+ GQ LGF GSGLYAYYKL+GK
Sbjct: 298 CGNLKDLFTIGLGWMIFGGLPFDFWNLIGQFLGFAGSGLYAYYKLIGK 345

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145334197|ref|NP_001078479.1| UDP-sugar transporter-like protein [Arabidopsis thaliana] gi|332660630|gb|AEE86030.1| UDP-sugar transporter-like protein [Arabidopsis thaliana]

 Score =  521 bits (1343), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 253/345 (73%), Positives = 301/345 (87%), Gaps = 4/345 (1%)

Query: 7   KSPMLPVSEPARGDEGEKERLLKG-DEKLFRGSAMTRRGANAAISYMACAVLLVMFNKAA 65
            +P+LPVS+P    E + +   KG D++LF+GSAMT+RGA AA+SYMACAV+LV+FNKAA
Sbjct: 3   NNPVLPVSDPPLAGENDSDG--KGVDDRLFKGSAMTKRGAYAALSYMACAVMLVLFNKAA 60

Query: 66  LSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTL 125
           LSSY+FPC NVITL QM+SS  FLY LRR KII+FT  DS  + DS+STFVP+KTL HTL
Sbjct: 61  LSSYDFPCVNVITLFQMVSSSLFLYALRRRKIISFTAADSF-SIDSASTFVPVKTLFHTL 119

Query: 126 PLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLII 185
           PLA+AYLLYM+ S+ SVRGVNVPMYTTLRRTTVAFTM++EY L GQ+YT  ++GSVG+I+
Sbjct: 120 PLAIAYLLYMLASMASVRGVNVPMYTTLRRTTVAFTMVIEYMLTGQRYTRSIIGSVGIIL 179

Query: 186 LGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPL 245
           LGAF AGARDLSFDF+GY VVFLANI+TA+YLATIAR GKSSGLNSFGLMW NG+ICGP+
Sbjct: 180 LGAFFAGARDLSFDFYGYGVVFLANISTAVYLATIARTGKSSGLNSFGLMWSNGIICGPI 239

Query: 246 LLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGN 305
           L++WTF+ GDLE TINFP+LL+PGF+VVL  SC+LAF LNY IFLNTTLNSA+TQTICGN
Sbjct: 240 LMIWTFICGDLEKTINFPHLLTPGFMVVLLCSCVLAFVLNYCIFLNTTLNSALTQTICGN 299

Query: 306 LKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKLVGK 350
           +KDLFT+GLGW+LFGGLPFD +NV GQL GF GSGLYAYYK++G+
Sbjct: 300 MKDLFTVGLGWMLFGGLPFDLMNVIGQLFGFFGSGLYAYYKIIGR 344

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297798730|ref|XP_002867249.1| hypothetical protein ARALYDRAFT_491505 [Arabidopsis lyrata subsp. lyrata] gi|297313085|gb|EFH43508.1| hypothetical protein ARALYDRAFT_491505 [Arabidopsis lyrata subsp. lyrata]

 Score =  520 bits (1338), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 250/343 (72%), Positives = 299/343 (87%), Gaps = 7/343 (2%)

Query: 8   SPMLPVSEPARGDEGEKERLLKGDEKLFRGSAMTRRGANAAISYMACAVLLVMFNKAALS 67
           +P+LPVS+P    E +       D++LF+GSAMT+RGA AA+SYMACAV+LV+FNKAALS
Sbjct: 7   NPVLPVSDPPLAGENDV------DDRLFKGSAMTKRGAYAALSYMACAVMLVLFNKAALS 60

Query: 68  SYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPL 127
           SY+FPC NVITL QM+SS  FLY LRR KII+FT  DS  + D++S FVP+KTL HTLPL
Sbjct: 61  SYDFPCVNVITLFQMVSSSLFLYALRRRKIISFTAADSF-SIDNASNFVPVKTLFHTLPL 119

Query: 128 AVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILG 187
           ++AYL+YM+ S+ SVRGVNVPMYTTLRRTTVAFTM++EY L GQ+YT  ++GSVG+I+LG
Sbjct: 120 SIAYLMYMLASMASVRGVNVPMYTTLRRTTVAFTMVIEYMLTGQRYTRSIIGSVGVILLG 179

Query: 188 AFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLL 247
           AF AGARDLSFDF+GY VVFLANI+TA+YLATIAR GKSSGLNSFGLMW NG+ICGP+L+
Sbjct: 180 AFFAGARDLSFDFYGYGVVFLANISTAVYLATIARTGKSSGLNSFGLMWSNGIICGPILM 239

Query: 248 LWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLK 307
           +WTF+ GDLE TINFP+LLSPGF+VVL  SC+LAFFLNY IFLNTTLNSA+TQTICGN+K
Sbjct: 240 IWTFICGDLEKTINFPHLLSPGFMVVLLCSCVLAFFLNYCIFLNTTLNSALTQTICGNMK 299

Query: 308 DLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKLVGK 350
           DLFT+GLGW+LFGGLPFD +NV GQLLGF GSGLYAYYK++G+
Sbjct: 300 DLFTVGLGWMLFGGLPFDLMNVIGQLLGFFGSGLYAYYKIIGR 342

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356515388|ref|XP_003526382.1| PREDICTED: UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter-like [Glycine max]

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 259/349 (74%), Positives = 300/349 (85%), Gaps = 8/349 (2%)

Query: 3   SNSSKSPMLPVSEPARGDEGEKERLLKGDE-KLFRGSAMTRRGANAAISYMACAVLLVMF 61
           S SS++ MLPVS+P   ++ ++E LLK D  K F+    TRR   AAISYM+CAVLLV+F
Sbjct: 6   SYSSENLMLPVSDPP--NDEDREWLLKADNYKTFQ----TRR-IYAAISYMSCAVLLVLF 58

Query: 62  NKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTL 121
           NKAALSSY+FP A+VITLLQM+ SC FLY LRRW+II+F  G+S++ SD+S  FVPLKTL
Sbjct: 59  NKAALSSYHFPSASVITLLQMVCSCCFLYVLRRWRIISFIAGESVIMSDNSKGFVPLKTL 118

Query: 122 MHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSV 181
            HTLPLA AYLLYM+V++ESVRGVNVPMYTTLRRTTV FTM++EY L GQ+Y+P V+ SV
Sbjct: 119 KHTLPLAGAYLLYMLVTMESVRGVNVPMYTTLRRTTVVFTMLVEYMLVGQRYSPSVIFSV 178

Query: 182 GLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVI 241
           GLI+ GAFVAGARDLSFD  GYA+VFL+NITTAIYLATIAR+GK+SGLNSFGLMWCNGV 
Sbjct: 179 GLIVFGAFVAGARDLSFDAHGYAIVFLSNITTAIYLATIARVGKTSGLNSFGLMWCNGVT 238

Query: 242 CGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQT 301
           CGP L +WT +RGD++ TIN PYLLSPGF+VVL FSCILAFFLNYSIFLNTTLNSA+ QT
Sbjct: 239 CGPFLFIWTLVRGDVKMTINSPYLLSPGFIVVLLFSCILAFFLNYSIFLNTTLNSALAQT 298

Query: 302 ICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKLVGK 350
           ICGNLKDLFTIG GWI+FGGLPFDF NV GQLLGF GSGLYAYYKL+G+
Sbjct: 299 ICGNLKDLFTIGFGWIIFGGLPFDFWNVVGQLLGFAGSGLYAYYKLIGR 347

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	350
WB|WBGene00005025	329	sqv-7 [Caenorhabditis elegans	0.808	0.860	0.331	3.7e-32
MGI|MGI:1917734	326	Slc35d2 "solute carrier family	0.765	0.822	0.296	9.9e-31
RGD|1309518	326	Slc35d2 "solute carrier family	0.765	0.822	0.296	1.6e-30
UNIPROTKB|Q76EJ3	337	SLC35D2 "UDP-N-acetylglucosami	0.765	0.795	0.300	3.3e-30
UNIPROTKB|F1PQY1	349	SLC35D2 "Uncharacterized prote	0.825	0.828	0.301	3.8e-30
ZFIN|ZDB-GENE-040826-5	336	slc35d1a "solute carrier famil	0.814	0.848	0.306	2.1e-29
DICTYBASE|DDB_G0278631	382	DDB_G0278631 "DUF250 family pr	0.771	0.706	0.265	4.4e-29
ZFIN|ZDB-GENE-040426-1213	363	slc35d1b "solute carrier famil	0.811	0.782	0.297	4.4e-29
DICTYBASE|DDB_G0276625	314	DDB_G0276625 "TPT transporter	0.822	0.917	0.310	1.2e-28
UNIPROTKB|Q9NTN3	355	SLC35D1 "UDP-glucuronic acid/U	0.894	0.881	0.280	1.9e-28

WB|WBGene00005025 sqv-7 [Caenorhabditis elegans (taxid:6239)]

 Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
 Identities = 100/302 (33%), Positives = 153/302 (50%)

Query:    47 AAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSL 106
             +A+ Y   +VL+V  NK  L++Y FP    + + QM+++   L+F + ++I+ F    SL
Sbjct:    15 SAVFYGVISVLIVFVNKILLTNYKFPSFLFVGVGQMMATILILFFAKMFRIVQFP---SL 71

Query:   107 MTSDSSSTFVPLKTLMHTLPLAVAYLLYMXXXXXXXXXXXXPMYTTLRRTTVAFTMIMEY 166
                DSS   +P K +    PL + Y   +            PM+T LRR ++  TMI+E+
Sbjct:    72 ---DSS---IPRKIM----PLPLLYFFNLISGLGGTQMINLPMFTVLRRFSILMTMILEF 121

Query:   167 FLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANI-TTAIYLATIARIGK 225
             ++   K +  V  SVGL+I G+F+A   DLSFD  GY ++F+ NI T A+ + T  ++  
Sbjct:   122 YILNVKASKAVKISVGLMIGGSFIAAIYDLSFDALGYTMIFINNICTAALGVYTKQKLD- 180

Query:   226 SSGLNSFGLMWCNGV-ICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCF--SCILAF 282
             +  L  +GLM+ N + +  P L +  +  GDL+   +F    S    V  CF  SCI  F
Sbjct:   181 AKDLGKYGLMFYNCLFMLLPALCVVQYT-GDLDRAYSFMLSDSMTSSVWTCFLLSCICGF 239

Query:   283 FLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVXXXXXXXXXXXXY 342
              LNYS+ L T  NSA+T T  G +K+LF   +G    G   F + N             Y
Sbjct:   240 VLNYSLVLCTHHNSALTTTCVGPIKNLFVTYVGMFSSGDYVFQWANFTGINVSVFGSILY 299

Query:   343 AY 344
              Y
Sbjct:   300 TY 301

GO:0016021 "integral to membrane" evidence=IEA

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0002009 "morphogenesis of an epithelium" evidence=IMP

GO:0040025 "vulval development" evidence=IMP

GO:0018991 "oviposition" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

MGI|MGI:1917734 Slc35d2 "solute carrier family 35, member D2" [Mus musculus (taxid:10090)]

 Score = 316 (116.3 bits), Expect = 9.9e-31, Sum P(2) = 9.9e-31
 Identities = 84/283 (29%), Positives = 141/283 (49%)

Query:    47 AAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSL 106
             +A+ Y  C+ L+V+ NKA L++Y FP   V+ + QM ++   LY  +  KII+F   D  
Sbjct:    18 SALFYGTCSFLIVLVNKALLTTYGFPSPIVLGIGQMATTIMILYVFKLNKIIHFPDFDKK 77

Query:   107 MTSDSSSTFVPLKTLMHTLPLAVAYLLYMXXXXXXXXXXXXPMYTTLRRTTVAFTMIMEY 166
                      +P K      PL + Y+               PM+T LR+ T+ FT+++E 
Sbjct:    78 ---------IPGKLF----PLPLLYVGNHISGLSSTSKLSLPMFTVLRKFTIPFTLLLEA 124

Query:   167 FLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKS 226
              + G +Y+  ++ SV  I+LGAF+A   DL+F+  GY  VFL +I TA       +    
Sbjct:   125 IILGTQYSLNIILSVLAIVLGAFIAAGSDLTFNLEGYVFVFLNDIFTAANGVYTKQKMDP 184

Query:   227 SGLNSFGLMWCNGV-ICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLN 285
               L  +G+++ N   +  P +++ +   GD +    F +  +  F++    SC+L F L 
Sbjct:   185 KELGKYGVLFYNACFMLIPTVII-SVSTGDFQQATEFRHWKNVLFIIQFLLSCLLGFLLM 243

Query:   286 YSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLN 328
             YS  L +  NSA+T  + G +K++    +G ++ G   F  LN
Sbjct:   244 YSTALCSYYNSALTTAVVGAIKNVSVAYIGMLVGGDYIFSLLN 286

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

RGD|1309518 Slc35d2 "solute carrier family 35, member D2" [Rattus norvegicus (taxid:10116)]

 Score = 314 (115.6 bits), Expect = 1.6e-30, Sum P(2) = 1.6e-30
 Identities = 84/283 (29%), Positives = 142/283 (50%)

Query:    47 AAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSL 106
             +A+ Y  C+ L+V+ NKA L++Y FP   V+ + QM ++   LY  +  KII+F   D  
Sbjct:    18 SALFYGTCSFLIVLVNKALLTTYGFPSPIVLGIGQMTTTIMILYVSKLNKIIHFPDFDKK 77

Query:   107 MTSDSSSTFVPLKTLMHTLPLAVAYLLYMXXXXXXXXXXXXPMYTTLRRTTVAFTMIMEY 166
                      +P K      PL + Y+               PM+T LR+ T+  T+++E 
Sbjct:    78 ---------IPGKLF----PLPLLYVGNHISGLSSTSKLSLPMFTVLRKFTIPLTLLLEA 124

Query:   167 FLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKS 226
              + G++Y+  ++ SV  I+LGAF+A   DL+F++ GY  VFL +I TA       +    
Sbjct:   125 IILGKQYSLSIILSVLAIVLGAFIAAGSDLTFNWEGYVFVFLNDIFTAANGVYTKQKMDP 184

Query:   227 SGLNSFGLMWCNGV-ICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLN 285
               L  +G+++ N   +  P +++ +   GD +    F +  +  F+V    SC+L F L 
Sbjct:   185 KELGKYGVLFYNACFMLIPTVII-SVSTGDFQQATEFSHWKNVLFIVQFLLSCLLGFLLM 243

Query:   286 YSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLN 328
             YS  L +  NSA+T  + G +K++    +G ++ G   F  LN
Sbjct:   244 YSTALCSYYNSALTTAVVGAIKNVSVAYIGMLVGGDYIFSLLN 286

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q76EJ3 SLC35D2 "UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter" [Homo sapiens (taxid:9606)]

 Score = 312 (114.9 bits), Expect = 3.3e-30, Sum P(2) = 3.3e-30
 Identities = 85/283 (30%), Positives = 140/283 (49%)

Query:    47 AAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSL 106
             +A+ Y  C+ L+V+ NKA L++Y FP    + + QM ++   LY  +  KII+F   D  
Sbjct:    30 SALFYGTCSFLIVLVNKALLTTYGFPSPIFLGIGQMAATIMILYVSKLNKIIHFPDFDKK 89

Query:   107 MTSDSSSTFVPLKTLMHTLPLAVAYLLYMXXXXXXXXXXXXPMYTTLRRTTVAFTMIMEY 166
                      +P+K      PL + Y+               PM+T LR+ T+  T+++E 
Sbjct:    90 ---------IPVKLF----PLPLLYVGNHISGLSSTSKLSLPMFTVLRKFTIPLTLLLET 136

Query:   167 FLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKS 226
              + G++Y+  ++ SV  IILGAF+A   DL+F+  GY  VFL +I TA       +    
Sbjct:   137 IILGKQYSLNIILSVFAIILGAFIAAGSDLAFNLEGYIFVFLNDIFTAANGVYTKQKMDP 196

Query:   227 SGLNSFGLMWCNGV-ICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLN 285
               L  +G+++ N   +  P L++ +   GDL+    F    +  F++    SC L F L 
Sbjct:   197 KELGKYGVLFYNACFMIIPTLII-SVSTGDLQQATEFNQWKNVVFILQFLLSCFLGFLLM 255

Query:   286 YSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLN 328
             YS  L +  NSA+T  + G +K++    +G ++ G   F  LN
Sbjct:   256 YSTVLCSYYNSALTTAVVGAIKNVSVAYIGILIGGDYIFSLLN 298

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=NAS

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0000139 "Golgi membrane" evidence=TAS

GO:0055085 "transmembrane transport" evidence=TAS

UNIPROTKB|F1PQY1 SLC35D2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
 Identities = 92/305 (30%), Positives = 150/305 (49%)

Query:    47 AAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSL 106
             +A+ Y AC+ L+V+ NKA L++Y FP    + + QM ++   LY  +  KII+F   D  
Sbjct:    40 SALFYGACSFLIVLVNKALLTAYGFPSPIFLGIGQMAATIMILYVSKLNKIIHFPDFDKK 99

Query:   107 MTSDSSSTFVPLKTLMHTLPLAVAYLLYMXXXXXXXXXXXXPMYTTLRRTTVAFTMIMEY 166
                      +P+K L    PL + Y+               PM+T LR+ T+  T+++E 
Sbjct:   100 ---------IPVKKLF---PLPLLYIGNHISGLSSTSKLSLPMFTVLRKFTIPLTLLLET 147

Query:   167 FLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIY-LATIARIGK 225
              + G++Y+  ++ SV  IILGAF+A   DL+F   GY  VFL +I TA   + T  ++G 
Sbjct:   148 IILGKQYSLNIIASVFTIILGAFIAAGSDLAFYLEGYIFVFLNDIFTAANGVYTKQKMGP 207

Query:   226 SSGLNSFGLMWCNGV-ICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFL 284
                L  +G+++ N   +  P L++ +   GDL     F    +  F++    SC L F L
Sbjct:   208 KE-LGKYGVLFYNACFMIIPTLII-SVSTGDLRQATEFNEWKNVLFIIQFLLSCFLGFLL 265

Query:   285 NYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVXXXXXXXXXXXXYAY 344
              YS+ L +  NSA+T  + G +K++    +G ++ G   F  LN             Y++
Sbjct:   266 MYSMVLCSYYNSALTTAVVGAIKNVSIAYIGMLVGGDYIFSVLNFVGLNICMAGGLRYSF 325

Query:   345 YKLVG 349
               L G
Sbjct:   326 LTLSG 330

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-040826-5 slc35d1a "solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1a" [Danio rerio (taxid:7955)]

 Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
 Identities = 92/300 (30%), Positives = 147/300 (49%)

Query:    46 NAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDS 105
             +AA  Y   + L+V+ NK+ L++Y FP +  + + QM+++   L   +  ++I F     
Sbjct:    25 SAAGFYGISSFLIVVVNKSVLTNYRFPSSICVGIGQMLATVVVLRVGKALRVITFP---- 80

Query:   106 LMTSDSSSTFVPLKTLMHTLPLAVAYLLYMXXXXXXXXXXXXPMYTTLRRTTVAFTMIME 165
                 D S   +P KT     PL + Y+               PM+T LRR ++ FTM+ E
Sbjct:    81 --EFDGS---IPRKTF----PLPLLYVGNQITGLFGTKRLNLPMFTVLRRFSILFTMLAE 131

Query:   166 YFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGK 225
              FL  +K++ PV  +V  +ILGAFVA + DL+FD  GY  + + ++ TA   A + +   
Sbjct:   132 GFLLKKKFSRPVQLTVFTMILGAFVAASADLAFDLQGYVFILMNDVLTAANGAFVKQKLD 191

Query:   226 SSGLNSFGLMWCNGV-ICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFL 284
             S  L  +GL++ N + +  P LLL   + GD++   ++       F+     SCI+ F L
Sbjct:   192 SKELGKYGLLYYNALFMILPTLLL-AHVTGDMDKAFDYDGWSDVLFISQFFLSCIMGFIL 250

Query:   285 NYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVXXXXXXXXXXXXYAY 344
              YS  L T  NSA+T TI G LK++    +G +  G   F + N             Y+Y
Sbjct:   251 MYSTVLCTQYNSALTTTIVGCLKNILVTYIGMVFGGDYIFSWTNFIGLNISIAGSLVYSY 310

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

DICTYBASE|DDB_G0278631 DDB_G0278631 "DUF250 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
 Identities = 76/286 (26%), Positives = 147/286 (51%)

Query:    66 LSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTL 125
             +++Y+F  +N +   QM+ +   L+ L+ + I+         T+    T   +K LM   
Sbjct:   112 MTTYDFSASNFLLFNQMVVTIVILHILKHFNILKIN------TNFEKET---IKKLM--- 159

Query:   126 PLAVAYLLYMXXXXXXXXXXXXPMYTTLRRTTVAFTMIMEYFLAGQKYTPP-VVGSVGLI 184
             PL+  Y++ +            PMY+ L+R      ++MEYF+  +K +PP ++ SV ++
Sbjct:   160 PLSFCYIINVLLGLDSLKQLNIPMYSALKRLVAVVILVMEYFIL-KKVSPPKIIASVVVM 218

Query:   185 ILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGP 244
             ++GA VAG  DLSF+  GY++V L+ I  A YL  + ++  +S ++++ +++ N V+  P
Sbjct:   219 VIGAVVAGITDLSFNSLGYSLVLLSCIFQASYLIYVKKV--ASNMSTYDMLYYNSVLSLP 276

Query:   245 LLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICG 304
             + +    +  ++E    F +L    F      S  L FFLN+ IF  T++NS +T ++ G
Sbjct:   277 ITIFLMIVNQEIEYFQTFEHLYDSSFQAYFILSIFLGFFLNFCIFFCTSVNSPLTTSVTG 336

Query:   305 NLKDLFTIGLGWILFGGLPFDFLNVXXXXXXXXXXXXYAYYKLVGK 350
              +K++ +  +G ++F  +    +N+            Y++ KL  K
Sbjct:   337 QVKNIASTIIGAMVFNDIIIHPINILGLIINIIGSIWYSFLKLTSK 382

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0006810 "transport" evidence=IEA

ZFIN|ZDB-GENE-040426-1213 slc35d1b "solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1b" [Danio rerio (taxid:7955)]

 Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
 Identities = 89/299 (29%), Positives = 146/299 (48%)

Query:    47 AAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSL 106
             AA  Y   + L+V+ NK+ L++Y FP +  + + QM ++   +  LR  K +N      +
Sbjct:    37 AAAFYGISSFLIVVVNKSVLTNYRFPSSLALGIGQMFAT---VVVLRGAKALN------M 87

Query:   107 MTSDSSSTFVPLKTLMHTLPLAVAYLLYMXXXXXXXXXXXXPMYTTLRRTTVAFTMIMEY 166
             ++       V  K      PL + Y+               PM+T LRR ++ FTM+ E 
Sbjct:    88 ISFPDFDWHVAYKVF----PLPLLYVGNQLTGLFGTKQLNLPMFTVLRRFSILFTMLFEG 143

Query:   167 FLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKS 226
             +L  QK++  +  +V  +ILGAFVA + DL+FD  GY  + L NI TA   A + +   S
Sbjct:   144 YLLKQKFSWSIKATVFTMILGAFVAASSDLAFDLQGYVFITLNNILTAANGAYMKQKLDS 203

Query:   227 SGLNSFGLMWCNGVICG-PLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLN 285
               L  +GL++ N ++   P ++L  +  GD++ T+         F++    SC++ F L 
Sbjct:   204 KELGKYGLLYYNALLMIIPTVVL-AYFTGDVQKTLECEVWADYFFVIQFVLSCVMGFILM 262

Query:   286 YSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVXXXXXXXXXXXXYAY 344
             YSI L T  NSA+T TI G +K++    +G +  G   F ++N             Y+Y
Sbjct:   263 YSIMLCTHYNSALTTTIVGCIKNILVTYIGMVFGGDYIFSWMNFVGLNISIAGSLVYSY 321

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

DICTYBASE|DDB_G0276625 DDB_G0276625 "TPT transporter family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
 Identities = 95/306 (31%), Positives = 147/306 (48%)

Query:    43 RGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTM 102
             +G   A++Y   +V +  FNKA L+ Y F  +N +TL QMI S  FL  ++ +  I++  
Sbjct:    12 KGFFVAVAYGVTSVSITFFNKAVLNYYGFNFSNSLTLGQMIFSLFFLVTMKTFGYISYP- 70

Query:   103 GDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMXXXXXXXXXXXXPMYTTLRRTTVAFTM 162
                    D +     L        L++ ++L +            P+++ LRR +    +
Sbjct:    71 -------DFN-----LDLCKKLASLSLLFILMVISGLAALAKTNVPLFSALRRLSTLIVI 118

Query:   163 IMEYFLAGQKYTPP-VVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIA 221
             + E FL G K TP   V SV +++LGA +AG  D +FDF G   +      TA YL  IA
Sbjct:   119 VGEGFLLG-KVTPTDEVQSVVVMVLGALIAGLGDATFDFVGSIYILFNCFVTAGYLIYIA 177

Query:   222 RIGKSSGLNSFGLM-WCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCIL 280
             +  K + LN+FGLM +CN ++  P  ++ TF+  + E    F    + GF      S I 
Sbjct:   178 KKTKETQLNTFGLMFYCN-ILSLPATIILTFIT-EWEGISTFEGYGNIGFQFCFFMSSIQ 235

Query:   281 AFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVXXXXXXXXXXX 340
             AF LNY IFL +T+NS +T +I G +K +    +G  +FG +    L             
Sbjct:   236 AFLLNYFIFLCSTMNSPLTTSITGQIKSILQTIIGLFMFGDVIITPLLSFGLIFSTLASF 295

Query:   341 XYAYYK 346
              Y+Y K
Sbjct:   296 WYSYIK 301

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|Q9NTN3 SLC35D1 "UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter" [Homo sapiens (taxid:9606)]

 Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
 Identities = 93/331 (28%), Positives = 156/331 (47%)

Query:    18 RGDEGEKERLLKGDEKLFRGSAMTRR---GANAAISYMACAVLLVMFNKAALSSYNFPCA 74
             +G+   K   L+ +E+L   SA T        AA  Y   + L+V+ NK+ L++Y FP +
Sbjct:    13 KGEAPAKSSTLRDEEELGMASAETLTVFLKLLAAGFYGVSSFLIVVVNKSVLTNYRFPSS 72

Query:    75 NVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLY 134
               + L QM+++ + L+  +  +++ F         D +   VP KT     PL + Y   
Sbjct:    73 LCVGLGQMVATVAVLWVGKALRVVKFP------DLDRN---VPRKTF----PLPLLYFGN 119

Query:   135 MXXXXXXXXXXXXPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR 194
                          PM+T LRR ++ FTM  E  L  + ++  +  +V  +I+GAFVA + 
Sbjct:   120 QITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLLKKTFSWGIKMTVFAMIIGAFVAASS 179

Query:   195 DLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGV-ICGPLLLLWTFLR 253
             DL+FD  GYA + + ++ TA   A + +   S  L  +GL++ N + +  P L +  +  
Sbjct:   180 DLAFDLEGYAFILINDVLTAANGAYVKQKLDSKELGKYGLLYYNALFMILPTLAI-AYFT 238

Query:   254 GDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIG 313
             GD +  + F       FL+    SC++ F L Y+  L T  NSA+T TI G +K++    
Sbjct:   239 GDAQKAVEFEGWADTLFLLQFTLSCVMGFILMYATVLCTQYNSALTTTIVGCIKNILITY 298

Query:   314 LGWILFGGLPFDFLNVXXXXXXXXXXXXYAY 344
             +G +  G   F + N             Y+Y
Sbjct:   299 IGMVFGGDYIFTWTNFIGLNISIAGSLVYSY 329

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0048706 "embryonic skeletal system development" evidence=IEA

GO:0030206 "chondroitin sulfate biosynthetic process" evidence=NAS

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=NAS

GO:0005463 "UDP-N-acetylgalactosamine transmembrane transporter activity" evidence=NAS

GO:0015789 "UDP-N-acetylgalactosamine transport" evidence=NAS

GO:0005461 "UDP-glucuronic acid transmembrane transporter activity" evidence=TAS

GO:0005789 "endoplasmic reticulum membrane" evidence=TAS

GO:0006065 "UDP-glucuronate biosynthetic process" evidence=TAS

GO:0006805 "xenobiotic metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0055085 "transmembrane transport" evidence=TAS

GO:0015787 "UDP-glucuronic acid transport" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q18779	SQV7_CAEEL	No assigned EC number	0.3355	0.8285	0.8814	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	350
COG5070	309	COG5070, VRG4, Nucleotide-sugar transporter [Carbo	1e-15
pfam08449	303	pfam08449, UAA, UAA transporter family	6e-11
pfam03151	149	pfam03151, TPT, Triose-phosphate Transporter famil	1e-10
TIGR00817	302	TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate	3e-05

>gnl|CDD|227402 COG5070, VRG4, Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

 Score = 76.1 bits (187), Expect = 1e-15
 Identities = 71/307 (23%), Positives = 137/307 (44%), Gaps = 25/307 (8%)

Query: 47  AAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSL 106
           A++SY   ++L+ + NK  LS+  F    ++  +Q +     L  L+  +++ F +  + 
Sbjct: 10  ASLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFRLTKA- 68

Query: 107 MTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEY 166
                              P++   ++ +  S +S++ + VP+YT  +  T+      E 
Sbjct: 69  ---------------KKWFPISFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEV 113

Query: 167 FLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFF-------GYAVVFLANITTAIYLAT 219
              G + T   + S  L++L + VA   D     F       GY  +F   +++A ++  
Sbjct: 114 LFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILNPGYLWMFTNCLSSAAFVLI 173

Query: 220 IARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCI 279
           + +  K +    F  M+ N ++  P+LL ++FL  D  +  N    LS   L+ +  S +
Sbjct: 174 MRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFED-WSPGNLANNLSVDSLMAMFISGL 232

Query: 280 LAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGS 339
            +  ++Y       + S+ T ++ G L  L  I L  ++F   P +FL++F  LLGFL  
Sbjct: 233 CSVGISYCSAWCVRVTSSTTYSMVGALNKL-PIALAGLVFFDAPVNFLSIFSILLGFLSG 291

Query: 340 GLYAYYK 346
            +YA  K
Sbjct: 292 AIYAVAK 298

Length = 309

>gnl|CDD|219846 pfam08449, UAA, UAA transporter family

 Score = 62.2 bits (152), Expect = 6e-11
 Identities = 57/242 (23%), Positives = 105/242 (43%), Gaps = 15/242 (6%)

Query: 116 VPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTP 175
           +PLKT +    +   + L  V++ E+++ ++ P +   +   +   MI+   + G++Y+ 
Sbjct: 62  IPLKTYVL---IVATFFLSSVLNNEALKYISYPTHVIFKSCKLIPVMILGILIYGKRYSS 118

Query: 176 PVVGSVGLIILGAFVA---------GARDLSF-DFFGYAVVFLANITTAIYLATIARIGK 225
               S  LI LG  +           ++  +F D  G A++F A +  A+   T  ++ K
Sbjct: 119 LQYLSALLITLGVIIFTLASAKDSKNSKLTTFSDNVGIALLFGALLMDALTGNTQEKLYK 178

Query: 226 SSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLS-PGFLVVLCFSCILAFFL 284
             G +S  +M+ + ++  P  LL               + L  P  L  L  + +  +  
Sbjct: 179 KYGKHSKEMMFYSHLLSLPFFLLGLLDIRTGLLFSAESFCLRHPSVLFYLLLNSLTQYVG 238

Query: 285 NYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAY 344
            + +F   +   A+T T+   L+   ++ L  +LFG  P       G LL FLG  LYAY
Sbjct: 239 QFFVFYLISEFGALTVTLVTTLRKFVSLLLSVLLFGN-PLTLQQWLGTLLVFLGIFLYAY 297

Query: 345 YK 346
            K
Sbjct: 298 LK 299

This family includes transporters with a specificity for UDP-N-acetylglucosamine. Length = 303

>gnl|CDD|217390 pfam03151, TPT, Triose-phosphate Transporter family

 Score = 59.1 bits (144), Expect = 1e-10
 Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 8/150 (5%)

Query: 202 GYAVVFLANITTAIYLATIARI---GKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLET 258
           G+ +   A+   A+ L    ++    K + LN   L++    +   +LL         + 
Sbjct: 1   GFILALAASALFALRLILSQKLLKKKKGTKLNVLELLYYLSPVAFIVLLPGLLFSEGFKL 60

Query: 259 TINFPY----LLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGL 314
                     L +  ++++L  S +LAF  N S F      S +T ++ G +K +  I L
Sbjct: 61  GKFILKFFGDLKTSRYVLLLLLSGVLAFLYNLSAFGLLGRTSPLTSSVAGTVKRVVVIVL 120

Query: 315 GWILFGGLPFDFLNVFGQLLGFLGSGLYAY 344
             I+FG  P  FLN+ G  +  LG  LY+Y
Sbjct: 121 SVIIFGD-PVTFLNILGLAIAILGVVLYSY 149

This family includes transporters with a specificity for triose phosphate. Length = 149

>gnl|CDD|129898 TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate translocator

 Score = 45.1 bits (107), Expect = 3e-05
 Identities = 51/239 (21%), Positives = 92/239 (38%), Gaps = 19/239 (7%)

Query: 121 LMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGS 180
           L   LP+A+ + +  V S  S+  V V    T++     F++++  F  GQ++   +  S
Sbjct: 65  LKLLLPVAIVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLS 124

Query: 181 VGLIILGAFVAGARDLSFDFFGYAVVFLANIT---TAIYLATIARIGKSSGLNSFGLMWC 237
           +  I+ G  +A   +LSF++ G+    ++NIT     I+      I      N +  +  
Sbjct: 125 LLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISI 184

Query: 238 NGVIC---------GPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSI 288
             +           GP  L   F++      +   Y +S   LV          F     
Sbjct: 185 MSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVS---LVAA---MGFFHFYQQVA 238

Query: 289 FLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKL 347
           F+     S +T ++   +K +  I +  + FG        VFG  +   G  LY+  K 
Sbjct: 239 FMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGT-KISPQQVFGTGIAIAGVFLYSRVKA 296

The 6-8 TMS Triose-phosphate Transporter (TPT) Family (TC 2.A.7.9)Functionally characterized members of the TPT family are derived from the inner envelope membranes of chloroplasts and nongreen plastids of plants. However,homologues are also present in yeast. Saccharomyces cerevisiae has three functionally uncharacterized TPT paralogues encoded within its genome. Under normal physiologicalconditions, chloroplast TPTs mediate a strict antiport of substrates, frequently exchanging an organic three carbon compound phosphate ester for inorganic phosphate (Pi).Normally, a triose-phosphate, 3-phosphoglycerate, or another phosphorylated C3 compound made in the chloroplast during photosynthesis, exits the organelle into thecytoplasm of the plant cell in exchange for Pi. However, experiments with reconstituted translocator in artificial membranes indicate that transport can also occur by achannel-like uniport mechanism with up to 10-fold higher transport rates. Channel opening may be induced by a membrane potential of large magnitude and/or by high substrateconcentrations. Nongreen plastid and chloroplast carriers, such as those from maize endosperm and root membranes, mediate transport of C3 compounds phosphorylated atcarbon atom 2, particularly phosphenolpyruvate, in exchange for Pi. These are the phosphoenolpyruvate:Pi antiporters (PPT). Glucose-6-P has also been shown to be asubstrate of some plastid translocators (GPT). The three types of proteins (TPT, PPT and GPT) are divergent in sequence as well as substrate specificity, but their substratespecificities overlap [Hypothetical proteins, Conserved]. Length = 302

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	350
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	100.0
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	100.0
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	100.0
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	100.0
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.97
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.96
PLN00411	358	nodulin MtN21 family protein; Provisional	99.96
PRK11272	292	putative DMT superfamily transporter inner membran	99.96
PRK11689	295	aromatic amino acid exporter; Provisional	99.96
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.95
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.95
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.95
PRK15430	296	putative chloramphenical resistance permease RarD;	99.95
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.94
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.93
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.93
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.89
KOG1581	327	consensus UDP-galactose transporter related protei	99.89
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.88
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.88
KOG1580	337	consensus UDP-galactose transporter related protei	99.85
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.83
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.81
KOG2765	416	consensus Predicted membrane protein [Function unk	99.81
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.78
KOG1582	367	consensus UDP-galactose transporter related protei	99.78
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.78
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.76
COG2962	293	RarD Predicted permeases [General function predict	99.74
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.72
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.71
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.64
KOG2766	336	consensus Predicted membrane protein [Function unk	99.43
COG2510	140	Predicted membrane protein [Function unknown]	99.35
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	99.26
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	99.25
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.14
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.13
COG2510	140	Predicted membrane protein [Function unknown]	99.08
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.01
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.92
PRK15430	296	putative chloramphenical resistance permease RarD;	98.89
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.82
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.82
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.77
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.66
PLN00411	358	nodulin MtN21 family protein; Provisional	98.55
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.45
COG2962	293	RarD Predicted permeases [General function predict	98.4
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.36
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.3
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.29
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.27
PRK11689	295	aromatic amino acid exporter; Provisional	98.22
PRK11272	292	putative DMT superfamily transporter inner membran	98.18
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.17
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.16
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.11
PRK13499	345	rhamnose-proton symporter; Provisional	98.04
KOG2922	335	consensus Uncharacterized conserved protein [Funct	97.89
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.78
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.73
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.66
COG0697	292	RhaT Permeases of the drug/metabolite transporter	97.66
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.65
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.63
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.41
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.27
COG2076	106	EmrE Membrane transporters of cations and cationic	97.24
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.2
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.2
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.15
PRK11431	105	multidrug efflux system protein; Provisional	97.1
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	97.08
COG2076	106	EmrE Membrane transporters of cations and cationic	97.07
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.99
PRK09541	110	emrE multidrug efflux protein; Reviewed	96.99
PRK11431	105	multidrug efflux system protein; Provisional	96.98
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	96.73
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	96.71
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.66
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	96.57
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.39
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	96.38
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	96.16
PRK13499	345	rhamnose-proton symporter; Provisional	96.07
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	95.9
KOG4510	346	consensus Permease of the drug/metabolite transpor	95.67
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	95.49
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	95.46
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	95.32
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	95.0
KOG2765	416	consensus Predicted membrane protein [Function unk	93.15
KOG1581	327	consensus UDP-galactose transporter related protei	93.06
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	91.13
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	89.41
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	88.38
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	86.89
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	86.26
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	85.41
KOG1580	337	consensus UDP-galactose transporter related protei	85.27
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	82.29
KOG2922	335	consensus Uncharacterized conserved protein [Funct	82.15

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=100.00  E-value=6.6e-37  Score=281.58  Aligned_cols=290  Identities=19%  Similarity=0.207  Sum_probs=238.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHHHH
Q 018814           45 ANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHT  124 (350)
Q Consensus        45 ~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (350)
                      .+..+.|++.+++.+++||+++++  |++|+++++.|+.++.+.+.+....+..+             +.+.++++++..
T Consensus         4 ~~~~~~w~~~~~~~~~~NK~~l~~--~~~P~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~   68 (302)
T TIGR00817         4 GLLFGLWYFLNVYFNIYNKKLLNV--FPYPYFKTLISLAVGSLYCLLSWSSGLPK-------------RLKISSALLKLL   68 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhh--CChhHHHHHHHHHHHHHHHHHHHHhCCCC-------------CCCCCHHHHHHH
Confidence            567889999999999999999985  57999999999999988776663322211             122567899999


Q ss_pred             hhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccCcccchhHHH
Q 018814          125 LPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYA  204 (350)
Q Consensus       125 ~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~  204 (350)
                      ++.|+++.++..++|.+++|+++++++++++++|+++++++++++|||++++++.+++++++|+.+....+.+.+..|++
T Consensus        69 ~~~g~~~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~  148 (302)
T TIGR00817        69 LPVAIVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFL  148 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHH
Confidence            99998899999999999999999999999999999999999999999999999999999999998876666677778999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhh-cCCC----ccchhHHHHHHHHHH
Q 018814          205 VVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTI-NFPY----LLSPGFLVVLCFSCI  279 (350)
Q Consensus       205 l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~----~~~~~~~~~l~~~~~  279 (350)
                      ++++|++++++|.++.||..++.++++.+++.|++..+.+.+.|.....++..... +...    ......+...+..+.
T Consensus       149 ~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (302)
T TIGR00817       149 SAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAM  228 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHH
Confidence            99999999999999999988755689999999999999999998877655422111 0000    011122222333333


Q ss_pred             -HHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhheecCC
Q 018814          280 -LAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKLVGK  350 (350)
Q Consensus       280 -~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~~~~~  350 (350)
                       .....+...+.++++++|++.++.++++|++++++|++++|| ++|+.+++|+++++.|+++|++.|.+|+
T Consensus       229 ~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge-~lt~~~~~G~~lil~Gv~l~~~~k~~~~  299 (302)
T TIGR00817       229 GFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGT-KISPQQVFGTGIAIAGVFLYSRVKAQKP  299 (302)
T ss_pred             HHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCC-CCchhHHHHHHHHHHHHHHHHHHhccCc
Confidence             233344556789999999999999999999999999999999 9999999999999999999998776653

specificities overlap.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=100.00  E-value=8.7e-36  Score=278.36  Aligned_cols=293  Identities=19%  Similarity=0.199  Sum_probs=241.6

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchH
Q 018814           40 MTRRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLK  119 (350)
Q Consensus        40 ~~~~~~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (350)
                      ...+..+.++.|+.+|+..++.||++++++  ++|++++++|++++.+++.+....+.++.++           ....++
T Consensus        46 ~~~~~~~~~~~wy~~s~~~~~~nK~vl~~~--~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~-----------~~~~~~  112 (350)
T PTZ00343         46 FKWKLALLFLTWYALNVLYVVDNKLALNML--PLPWTISSLQLFVGWLFALLYWATGFRKIPR-----------IKSLKL  112 (350)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHhC--ChhHHHHHHHHHHHHHHHHHHHHhCCCCCCC-----------CCCHHH
Confidence            455668899999999999999999999874  6799999999999988766554433222110           001245


Q ss_pred             HHHHHhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccCcccc
Q 018814          120 TLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFD  199 (350)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~  199 (350)
                      +++.+++.|++........+.|++++++++++++++++|+++++++++++|||++++++.+++++++|+.+...+|.+++
T Consensus       113 ~~~~llp~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~  192 (350)
T PTZ00343        113 FLKNFLPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFT  192 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhH
Confidence            78899999988877777788999999999999999999999999999999999999999999999999999888888888


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhccC-----CCChhhHHHHHHHHHHHHHHHHHHHhccc--hhhh-c----CCCccc
Q 018814          200 FFGYAVVFLANITTAIYLATIARIGKSS-----GLNSFGLMWCNGVICGPLLLLWTFLRGDL--ETTI-N----FPYLLS  267 (350)
Q Consensus       200 ~~G~~l~l~sa~~~a~~~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~-~----~~~~~~  267 (350)
                      ..|++++++|++++|++.++.|+..++.     +.++.++..++.+.+.++++|+....+..  ...+ .    ......
T Consensus       193 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~  272 (350)
T PTZ00343        193 WLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTK  272 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccch
Confidence            8999999999999999999999988753     25677777778899999999887654321  1111 0    011111


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhhe
Q 018814          268 PGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYK  346 (350)
Q Consensus       268 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~  346 (350)
                      ...+..++.+++..+..|.+.|.++++++|.+.++.+++||++++++|++++|| ++|+.+++|.+++++|+++|++.|
T Consensus       273 ~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge-~lt~~~~iG~~lii~Gv~lYs~~k  350 (350)
T PTZ00343        273 GIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQT-QVTLLGYLGMAVAILGALLYSLFK  350 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCC-CCchHhHHHHHHHHHHHHHHhhcC
Confidence            223445666788888889888999999999999999999999999999999999 999999999999999999998753

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=100.00  E-value=3.9e-35  Score=264.15  Aligned_cols=293  Identities=27%  Similarity=0.417  Sum_probs=253.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHH
Q 018814           43 RGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLM  122 (350)
Q Consensus        43 ~~~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (350)
                      +.......|++++++.++.||++++.++|++|++++..|..++.+.....+..+..+.++            ..++..++
T Consensus        17 ~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~------------~~~~~~~~   84 (316)
T KOG1441|consen   17 RIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSK------------ISSKLPLR   84 (316)
T ss_pred             HHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCc------------cccccchH
Confidence            335678899999999999999999989999999999999999999988888776544211            12345788


Q ss_pred             HHhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccCcccchhH
Q 018814          123 HTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFG  202 (350)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G  202 (350)
                      ..+++|+.+..++++.|.+++++|++++|+++++.|+++.++++++.+|+.++..+.+++.+..|+.+.+.+|.+++..|
T Consensus        85 ~llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G  164 (316)
T KOG1441|consen   85 TLLPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFG  164 (316)
T ss_pred             HHHHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhh--ccCCCChhhHHHHHHHHHHHHHH-HHHHHhccchhhhcCCCccchhHHHHHHHHHH
Q 018814          203 YAVVFLANITTAIYLATIARIG--KSSGLNSFGLMWCNGVICGPLLL-LWTFLRGDLETTINFPYLLSPGFLVVLCFSCI  279 (350)
Q Consensus       203 ~~l~l~sa~~~a~~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  279 (350)
                      ...++.+.+..++++++.|++.  ++++.|+.+++.|+.+++...++ |+....+...........++..++..++.+ +
T Consensus       165 ~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-v  243 (316)
T KOG1441|consen  165 FISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLLNS-V  243 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHHHH-H
Confidence            9999999999999999999998  46789999999999999999998 776543221110001112223333444444 9


Q ss_pred             HHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhheecC
Q 018814          280 LAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKLVG  349 (350)
Q Consensus       280 ~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~~~~  349 (350)
                      +++..|.+.|++++++||++.++.+.+|.+..++.||++|+| +.|+.+..|.++.+.|+.+|++.|.++
T Consensus       244 ~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~-pvt~~n~~G~~iai~Gv~~Y~~~k~~~  312 (316)
T KOG1441|consen  244 LAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGN-PVTFLNALGYAIAILGVFLYSRAKLKE  312 (316)
T ss_pred             HHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecC-CCchhhHHHHHHHHHHHHHHHHHhhhh
Confidence            999999999999999999999999999999999999999999 999999999999999999999988764

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=4.7e-33  Score=245.03  Aligned_cols=295  Identities=34%  Similarity=0.590  Sum_probs=269.2

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHH
Q 018814           41 TRRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKT  120 (350)
Q Consensus        41 ~~~~~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (350)
                      +.+.+..++.|+++|..+++.||++++.++||...++...|.+.+.+.+...++.+..++++             .+++.
T Consensus        10 ~~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~-------------l~~~~   76 (314)
T KOG1444|consen   10 QSSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRP-------------LDLRT   76 (314)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCC-------------cChHH
Confidence            34558899999999999999999999999888777778899999999999999988887654             66788


Q ss_pred             HHHHhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccCcccch
Q 018814          121 LMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDF  200 (350)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~  200 (350)
                      .|+++|.++.+.++.+.+..+++|++++.++++|+.+|+++++.+..++|.|++++.|.++..+.+|......+|.+++.
T Consensus        77 ~kk~~P~~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~  156 (314)
T KOG1444|consen   77 AKKWFPVSLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNL  156 (314)
T ss_pred             HHHHccHHHHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchh-hhcCCCccchhHHHHHHHHHH
Q 018814          201 FGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLET-TINFPYLLSPGFLVVLCFSCI  279 (350)
Q Consensus       201 ~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~  279 (350)
                      .|+.|++...++.+.+.++.|+..+..+.+.+++++|+++++.+.+.....++||+.. ..+.+.+.+..++..+..+|+
T Consensus       157 ~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv  236 (314)
T KOG1444|consen  157 RGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCV  236 (314)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHH
Confidence            8999999999999999999999988778899999999999999999999999999872 123444667788899999999


Q ss_pred             HHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhheecC
Q 018814          280 LAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKLVG  349 (350)
Q Consensus       280 ~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~~~~  349 (350)
                      ++++.+|+.++|.+..||++.++++ ++-.+.+.+++++++|.+.++..++|..+-+.|..+|++.+.++
T Consensus       237 ~gf~isy~s~~ct~~~SAtT~tivG-~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~  305 (314)
T KOG1444|consen  237 MGFGISYTSFLCTRVNSATTTTIVG-AKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRK  305 (314)
T ss_pred             HHHHHHHHHHHHHhhccccceeehh-hhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhh
Confidence            9999999999999999999999999 88888888888888777999999999999999999999876443

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.97  E-value=5e-28  Score=222.41  Aligned_cols=275  Identities=23%  Similarity=0.327  Sum_probs=232.3

Q ss_pred             HHHHHHHhhc-CCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHHHHhhHHHHHHHHHHH
Q 018814           59 VMFNKAALSS-YNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVV  137 (350)
Q Consensus        59 ~~~~K~~l~~-~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  137 (350)
                      .++.+.+.++ ++.++|.++++.|++++.+.........+.+.               .++..++++.+.++++.++..+
T Consensus        16 g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~   80 (303)
T PF08449_consen   16 GILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPK---------------SRKIPLKKYAILSFLFFLASVL   80 (303)
T ss_pred             HHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccC---------------CCcChHHHHHHHHHHHHHHHHH
Confidence            3444555543 33347999999999999888776655433110               2223467788889999999999


Q ss_pred             hhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccCcc----c------chhHHHHHH
Q 018814          138 SVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLS----F------DFFGYAVVF  207 (350)
Q Consensus       138 ~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~----~------~~~G~~l~l  207 (350)
                      .|.|++|+|.++.+++|++.|+++++++.+++|||++++++.++++..+|+++...+|.+    .      +..|+++.+
T Consensus        81 ~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~  160 (303)
T PF08449_consen   81 SNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLL  160 (303)
T ss_pred             HHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHH
Confidence            999999999999999999999999999999999999999999999999999996554421    1      123999999


Q ss_pred             HHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHH--hccchhhhcCCCccchhHHHHHHHHHHHHHHHH
Q 018814          208 LANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFL--RGDLETTINFPYLLSPGFLVVLCFSCILAFFLN  285 (350)
Q Consensus       208 ~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  285 (350)
                      +|.++.|++.+++||+.++++.++.++++|.+.++.+..++....  ++|..+..++.. ..+..+..++..++.+...+
T Consensus       161 ~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~-~~p~~~~~l~~~s~~~~~g~  239 (303)
T PF08449_consen  161 LSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFIS-AHPSVLLYLLLFSLTGALGQ  239 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHH-HhHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999889999999999999999999888887  777665544432 23446778888888888888


Q ss_pred             HHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhheecCC
Q 018814          286 YSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKLVGK  350 (350)
Q Consensus       286 ~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~~~~~  350 (350)
                      ...+..+++.+|.+.++...++.+.++++|+++||+ ++++.+|+|.++++.|..+|++.|+|+|
T Consensus       240 ~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~-~~~~~~~~G~~lv~~g~~~~~~~~~k~~  303 (303)
T PF08449_consen  240 FFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGH-PLSPLQWIGIVLVFAGIFLYSYAKKKKN  303 (303)
T ss_pred             HHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCC-cCChHHHHHHHHhHHHHHHHHHhhccCC
Confidence            888899999999999999999999999999999999 9999999999999999999999988875

; GO: 0055085 transmembrane transport

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.96  E-value=1.2e-30  Score=222.86  Aligned_cols=290  Identities=24%  Similarity=0.294  Sum_probs=260.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhc--CCCCchHHHHHHHHHHHHHHHHHHHHc-----cccccccCCCCccCCCCCCccch
Q 018814           46 NAAISYMACAVLLVMFNKAALSS--YNFPCANVITLLQMISSCSFLYFLRRW-----KIINFTMGDSLMTSDSSSTFVPL  118 (350)
Q Consensus        46 ~~~l~~~~~~~~~~~~~K~~l~~--~~f~~p~~l~~~r~~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~  118 (350)
                      .....+..+++++.+.||++++.  ...+.|.+.+++|.++...++..+.+.     +..++++           -.++.
T Consensus        31 ~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~-----------~~ldl   99 (347)
T KOG1442|consen   31 SAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPS-----------LQLDL   99 (347)
T ss_pred             hhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCc-----------ccccH
Confidence            34556779999999999999985  456789999999999999888776542     2233332           22677


Q ss_pred             HHHHHHhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccC---
Q 018814          119 KTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARD---  195 (350)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~---  195 (350)
                      +..+...|+++.+.+.+.+.|.|++|++++++.+-|++..+|+.++.++++|+|-+.....++++++.|..+...+|   
T Consensus       100 ~t~r~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~  179 (347)
T KOG1442|consen  100 ATARQVLPLSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGST  179 (347)
T ss_pred             HHHHhhcchhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheecccccccc
Confidence            88899999999999999999999999999999999999999999999999999999999999999999999977766   


Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHH
Q 018814          196 LSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLC  275 (350)
Q Consensus       196 ~~~~~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  275 (350)
                      ...++.|.++++.|+++.|+..+++||.....+-.-+.+.+|+++.+.++.+|...+.||....+.++..++..+|..+.
T Consensus       180 ~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mt  259 (347)
T KOG1442|consen  180 GTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMT  259 (347)
T ss_pred             CccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHH
Confidence            45678999999999999999999999988766666788999999999999999999999999998888888889999999


Q ss_pred             HHHHHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhhee
Q 018814          276 FSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKL  347 (350)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~~  347 (350)
                      ++|++++.+++...+.+|.+||.+..+.+..|....++++..+.+| ..+..-|-|-+++++|...|.+.|.
T Consensus       260 LsglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E-~ks~lwwtsn~~vLvgs~~YT~vk~  330 (347)
T KOG1442|consen  260 LSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSE-TKSGLWWTSNIVVLVGSLAYTLVKE  330 (347)
T ss_pred             HHHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHH-HhhhheeeeeEEEEehhHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999 9999999999999999999997654

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.96  E-value=1.2e-26  Score=216.16  Aligned_cols=287  Identities=13%  Similarity=0.077  Sum_probs=210.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHHHH
Q 018814           45 ANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHT  124 (350)
Q Consensus        45 ~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (350)
                      .++.+.--+...++..+.|..++. +. .|..+.++|+.++.+++.++.+.++++.+           .++.+++++..+
T Consensus        15 ~~~~~~~q~~~~~~~~~~k~a~~~-G~-~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~-----------~~~~~~~~~~~l   81 (358)
T PLN00411         15 LTAMLATETSVVGISTLFKVATSK-GL-NIYPFLGYSYLLASLLLLPSLFFTNRSRS-----------LPPLSVSILSKI   81 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHC-CC-CccHHHHHHHHHHHHHHHHHHHHHHHhcc-----------cCcchHHHHHHH
Confidence            444445556666777788999974 54 47779999999999888766543322100           111346677777


Q ss_pred             hhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHH------hccccCcchhhhHHHhhhhceeeecc-Cc-
Q 018814          125 LPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFL------AGQKYTPPVVGSVGLIILGAFVAGAR-DL-  196 (350)
Q Consensus       125 ~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~------~~e~~~~~~~~~~~l~~~Gv~l~~~~-~~-  196 (350)
                      ...|++......+++.+++|+++++++++.++.|++++++++++      +|||++++++.|++++++|+.+.... +. 
T Consensus        82 ~l~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~  161 (358)
T PLN00411         82 GLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPR  161 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcc
Confidence            77775555566689999999999999999999999999999999      69999999999999999999874321 10 


Q ss_pred             ----------------------ccc-hhHHHHHHHHHHHHHHHHHHHHHhhccCCCCh-hhHHHHHHHHHHHHHHHHHHH
Q 018814          197 ----------------------SFD-FFGYAVVFLANITTAIYLATIARIGKSSGLNS-FGLMWCNGVICGPLLLLWTFL  252 (350)
Q Consensus       197 ----------------------~~~-~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~  252 (350)
                                            ..+ ..|+.+.++|+++||+|.+..|+..+  ++++ ...+.|+..++...+.+....
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~--~~~~~~~~t~~~~~~~~~~~~~~~l~  239 (358)
T PLN00411        162 VFVASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMS--EYPAAFTVSFLYTVCVSIVTSMIGLV  239 (358)
T ss_pred             cccccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHH--HcCcHhHHHHHHHHHHHHHHHHHHHH
Confidence                                  112 35999999999999999999999887  4444 456667776666655554443


Q ss_pred             hccchhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHH
Q 018814          253 RGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQ  332 (350)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~  332 (350)
                      .++.. ...+....+... ..+++.++.+.+.....++++++.+|..++++.+++|++++++|++++|| ++++.+++|+
T Consensus       240 ~~~~~-~~~~~~~~~~~~-~~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE-~lt~~~~iG~  316 (358)
T PLN00411        240 VEKNN-PSVWIIHFDITL-ITIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLND-SLYLGCLIGG  316 (358)
T ss_pred             HccCC-cccceeccchHH-HHHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCC-CCcHHHHHHH
Confidence            32210 011111112222 33555666544433344689999999999999999999999999999999 9999999999


Q ss_pred             HHHHHHHHHhhhheecC
Q 018814          333 LLGFLGSGLYAYYKLVG  349 (350)
Q Consensus       333 ~li~~g~~~~~~~~~~~  349 (350)
                      ++++.|+++..+.+++|
T Consensus       317 ~LIl~Gv~l~~~~~~~~  333 (358)
T PLN00411        317 ILITLGFYAVMWGKANE  333 (358)
T ss_pred             HHHHHHHHHHHhhhhhh
Confidence            99999999988765543

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.96  E-value=4.8e-26  Score=208.32  Aligned_cols=271  Identities=11%  Similarity=0.066  Sum_probs=212.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHHHHh
Q 018814           46 NAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTL  125 (350)
Q Consensus        46 ~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (350)
                      ...++|+..++    ..|..+++.   +|..++++|+.++.+++.+....++.+               ..++++++...
T Consensus        15 ~~~~iWg~~~~----~~K~~~~~~---~p~~~~~~R~~~a~l~ll~~~~~~~~~---------------~~~~~~~~~~~   72 (292)
T PRK11272         15 ALYIIWGSTYL----VIRIGVESW---PPLMMAGVRFLIAGILLLAFLLLRGHP---------------LPTLRQWLNAA   72 (292)
T ss_pred             HHHHHHhhHHH----HHHHHhccC---CHHHHHHHHHHHHHHHHHHHHHHhCCC---------------CCcHHHHHHHH
Confidence            34455555554    559988866   799999999999988876655432211               02345677677


Q ss_pred             hHHHH-HHHHHHHhhhhh-cccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeecc-CcccchhH
Q 018814          126 PLAVA-YLLYMVVSVESV-RGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR-DLSFDFFG  202 (350)
Q Consensus       126 ~~~~~-~~~~~~~~~~al-~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~-~~~~~~~G  202 (350)
                      ..|.+ ......+.+.+. ++++++.++++.++.|+++++++.+ +|||++++++.+++++++|+.+...+ +.+.+..|
T Consensus        73 ~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G  151 (292)
T PRK11272         73 LIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWG  151 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHH
Confidence            77744 456677888888 9999999999999999999999985 69999999999999999999886433 33455679


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHHHH
Q 018814          203 YAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAF  282 (350)
Q Consensus       203 ~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  282 (350)
                      ++++++++++||.+.+..||..+  + ++.....++..++.+.+.+.....++..     ....+...|..+++.++++.
T Consensus       152 ~l~~l~a~~~~a~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~i~~l~i~~s  223 (292)
T PRK11272        152 AILILIASASWAFGSVWSSRLPL--P-VGMMAGAAEMLAAGVVLLIASLLSGERL-----TALPTLSGFLALGYLAVFGS  223 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCC--C-cchHHHHHHHHHHHHHHHHHHHHcCCcc-----cccCCHHHHHHHHHHHHHHH
Confidence            99999999999999999999754  2 3455677888888887777665433211     11123445677788888877


Q ss_pred             HHHHHH-HHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhheec
Q 018814          283 FLNYSI-FLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKLV  348 (350)
Q Consensus       283 ~~~~~~-~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~~~  348 (350)
                      ...+.. ++++++.++.+.++..+++|+.++++|++++|| ++++.+++|+++++.|+++.++.+++
T Consensus       224 ~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E-~~t~~~iiG~~lIi~gv~~~~~~~~~  289 (292)
T PRK11272        224 IIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGE-TLSPIEWLALGVIVFAVVLVTLGKYL  289 (292)
T ss_pred             HHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHHHHHHHHhh
Confidence            666655 689999999999999999999999999999999 99999999999999999998876554

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.96  E-value=4.2e-26  Score=208.96  Aligned_cols=265  Identities=14%  Similarity=0.089  Sum_probs=193.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHHHH
Q 018814           45 ANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHT  124 (350)
Q Consensus        45 ~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (350)
                      ++.+++|+..    ....|..++++   +|..+.++|+.++.+++.+...  +.+                .++++++..
T Consensus        10 l~a~~~Wg~~----~~~~k~~~~~~---~P~~~~~~R~~~a~l~l~~~~~--~~~----------------~~~~~~~~~   64 (295)
T PRK11689         10 LIAILLWSTM----VGLIRGVSESL---GPVGGAAMIYSVSGLLLLLTVG--FPR----------------LRQFPKRYL   64 (295)
T ss_pred             HHHHHHHHHH----HHHHHHHHccC---ChHHHHHHHHHHHHHHHHHHcc--ccc----------------cccccHHHH
Confidence            3444555544    44669999877   7999999999999888775431  111                011122333


Q ss_pred             hhHHHHHHHHHHHhhhhhcc----cchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccCc----
Q 018814          125 LPLAVAYLLYMVVSVESVRG----VNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL----  196 (350)
Q Consensus       125 ~~~~~~~~~~~~~~~~al~~----~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~----  196 (350)
                      +..++.+.....+.+.+++|    ++++.+.++.++.|+++.+++++++|||++++++.+++++++|+.++..++.    
T Consensus        65 ~~~~l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~  144 (295)
T PRK11689         65 LAGGLLFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSL  144 (295)
T ss_pred             HHHhHHHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchh
Confidence            34446666777777777754    5778889999999999999999999999999999999999999988654432    


Q ss_pred             -------ccchhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchh
Q 018814          197 -------SFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPG  269 (350)
Q Consensus       197 -------~~~~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  269 (350)
                             +.+..|++++++++++||.|.++.||..+  +.++.....   ..+...+.+.....++..      ...+..
T Consensus       145 ~~~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~--~~~~~~~~~---~~~~~~l~~~~~~~~~~~------~~~~~~  213 (295)
T PRK11689        145 AELINNIASNPLSYGLAFIGAFIWAAYCNVTRKYAR--GKNGITLFF---ILTALALWIKYFLSPQPA------MVFSLP  213 (295)
T ss_pred             hhhhhccccChHHHHHHHHHHHHHHHHHHHHhhccC--CCCchhHHH---HHHHHHHHHHHHHhcCcc------ccCCHH
Confidence                   12346999999999999999999999876  456655322   222333333333332211      112334


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhhe
Q 018814          270 FLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYK  346 (350)
Q Consensus       270 ~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~  346 (350)
                      .|..+++.++.+....+..++++|+.+|.+.++..+++|++++++|++++|| ++++.+++|+++++.|+.+....+
T Consensus       214 ~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE-~~~~~~~iG~~lI~~gv~~~~~~~  289 (295)
T PRK11689        214 AIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLST-PLSFSFWQGVAMVTAGSLLCWLAT  289 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCC-CCcHHHHHHHHHHHHhHHHHhhhH
Confidence            4555666665444445555799999999999999999999999999999999 999999999999999997776543

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.95  E-value=1.8e-25  Score=205.15  Aligned_cols=274  Identities=13%  Similarity=0.097  Sum_probs=200.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHHHH
Q 018814           45 ANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHT  124 (350)
Q Consensus        45 ~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (350)
                      ++.+++|+..+.    ..|..+++.   +|..+.++|+.++.+.+......  .+                .+   ++..
T Consensus        10 l~~~~~Wg~~~~----~~k~~~~~~---~p~~~~~~R~~~a~~~l~~~~~~--~~----------------~~---~~~~   61 (299)
T PRK11453         10 LLVVVVWGLNFV----VIKVGLHNM---PPLMLAGLRFMLVAFPAIFFVAR--PK----------------VP---LNLL   61 (299)
T ss_pred             HHHHHHHhhhHH----HHHHHHhcC---CHHHHHHHHHHHHHHHHHHHhcC--CC----------------Cc---hHHH
Confidence            445566655555    559988876   79999999999877655443321  11                11   1233


Q ss_pred             hhHHHH-HHHHHHHhhhhhcc-cchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccC---cccc
Q 018814          125 LPLAVA-YLLYMVVSVESVRG-VNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARD---LSFD  199 (350)
Q Consensus       125 ~~~~~~-~~~~~~~~~~al~~-~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~---~~~~  199 (350)
                      ...|+. ......+.+.+++| .+++.+.++.++.|+++.+++++++|||++++++.+++++++|+.+...++   .+.+
T Consensus        62 ~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~  141 (299)
T PRK11453         62 LGYGLTISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVA  141 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchh
Confidence            444543 33444577788888 688999999999999999999999999999999999999999998865432   2334


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhccCC-CChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHH
Q 018814          200 FFGYAVVFLANITTAIYLATIARIGKSSG-LNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSC  278 (350)
Q Consensus       200 ~~G~~l~l~sa~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  278 (350)
                      ..|++++++++++|+.|.++.|+..++.+ ........++...+.+.........++...........+...|..+++.+
T Consensus       142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  221 (299)
T PRK11453        142 MLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLA  221 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHH
Confidence            57999999999999999999999875322 12233445555554443333332222211110001123456678889999


Q ss_pred             HHHHHHHHHH-HHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhhee
Q 018814          279 ILAFFLNYSI-FLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKL  347 (350)
Q Consensus       279 ~~~~~~~~~~-~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~~  347 (350)
                      +++....+.. ++.+++.++.+.++..+++|++++++|++++|| ++++.+++|+++++.|+++..+.++
T Consensus       222 i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE-~~~~~~~iG~~lI~~gv~l~~~~~~  290 (299)
T PRK11453        222 FVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDE-RLTGLQFLGAVLIMAGLYINVFGLR  290 (299)
T ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCC-CccHHHHHHHHHHHHHHHHHhcchh
Confidence            9988888877 588999999999999999999999999999999 9999999999999999988765443

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.95  E-value=3.7e-25  Score=202.50  Aligned_cols=270  Identities=16%  Similarity=0.041  Sum_probs=206.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHH
Q 018814           43 RGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLM  122 (350)
Q Consensus        43 ~~~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (350)
                      ++....++-.+++.......|+.+++.   +|..+.++|++++.+++.+..+.++.+                .++++++
T Consensus        12 ~~~~~~~la~~~~~~~~~~~K~~~~~~---~~~~~~~~R~~~a~l~l~~~~~~~~~~----------------~~~~~~~   72 (293)
T PRK10532         12 LPILLLLIAMASIQSGASLAKSLFPLV---GAPGVTALRLALGTLILIAIFKPWRLR----------------FAKEQRL   72 (293)
T ss_pred             hHHHHHHHHHHHHHhhHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHHHHhHHhcc----------------CCHHHHH
Confidence            344555555555556666789999876   788899999999998887654322111                3456777


Q ss_pred             HHhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeecc--C-cccc
Q 018814          123 HTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR--D-LSFD  199 (350)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~--~-~~~~  199 (350)
                      ..+..|+++.....+++++++|+|++.++++..+.|+++.+++.    ||+.+  +.++.++++|+.++...  + .+.+
T Consensus        73 ~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~~--~~~~~i~~~Gv~li~~~~~~~~~~~  146 (293)
T PRK10532         73 PLLFYGVSLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPVD--FVWVVLAVLGLWFLLPLGQDVSHVD  146 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChHH--HHHHHHHHHHHheeeecCCCcccCC
Confidence            77788877888888999999999999999999999999998773    55544  45567788998875422  2 2335


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHH
Q 018814          200 FFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCI  279 (350)
Q Consensus       200 ~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  279 (350)
                      ..|++++++++++||.|.+..|+..+  +.++... .++..++...+.++....++       ....+...|..+++.++
T Consensus       147 ~~G~ll~l~aa~~~a~~~v~~r~~~~--~~~~~~~-~~~~~~~~~~l~~~~~~~~~-------~~~~~~~~~~~~l~lgv  216 (293)
T PRK10532        147 LTGAALALGAGACWAIYILSGQRAGA--EHGPATV-AIGSLIAALIFVPIGALQAG-------EALWHWSILPLGLAVAI  216 (293)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhc--cCCchHH-HHHHHHHHHHHHHHHHHccC-------cccCCHHHHHHHHHHHH
Confidence            67999999999999999999999976  4566665 45556666666665553321       01123334555678888


Q ss_pred             HHHHHHHHH-HHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhheec
Q 018814          280 LAFFLNYSI-FLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKLV  348 (350)
Q Consensus       280 ~~~~~~~~~-~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~~~  348 (350)
                      ++...++.. ++++++.+|.++++..+++|++++++|++++|| ++++.+++|+++++.|++.+.+..++
T Consensus       217 ~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE-~~~~~~~iG~~lIl~~~~~~~~~~~~  285 (293)
T PRK10532        217 LSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGE-TLTLIQWLALGAIIAASMGSTLTIRR  285 (293)
T ss_pred             HHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCC-CCcHHHHHHHHHHHHHHHHHHhcCCC
Confidence            888777766 699999999999999999999999999999999 99999999999999999999765444

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.95  E-value=5.1e-25  Score=198.28  Aligned_cols=252  Identities=17%  Similarity=0.152  Sum_probs=201.6

Q ss_pred             HHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHHHHhhHH-HHHHHHHHH
Q 018814           59 VMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLA-VAYLLYMVV  137 (350)
Q Consensus        59 ~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  137 (350)
                      .+..|+.+++.  .++..+.+.|++.+.+++.+....+  +                 ++++++.....| ++..+...+
T Consensus         5 ~~~~k~~~~~~--~~~~~~~~~r~~~~~l~l~~~~~~~--~-----------------~~~~~~~~~~~~~~~~~l~~~~   63 (260)
T TIGR00950         5 GVVIGQYLEGQ--VPLYFAVFRRLIFALLLLLPLLRRR--P-----------------PLKRLLRLLLLGALQIGVFYVL   63 (260)
T ss_pred             HHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHHHhc--c-----------------CHhHHHHHHHHHHHHHHHHHHH
Confidence            34669988753  4788889999998887776554332  1                 123445555555 677889999


Q ss_pred             hhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeecc-CcccchhHHHHHHHHHHHHHHH
Q 018814          138 SVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR-DLSFDFFGYAVVFLANITTAIY  216 (350)
Q Consensus       138 ~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~-~~~~~~~G~~l~l~sa~~~a~~  216 (350)
                      ++.|++|+++++++++.++.|+++++++.+++|||++++++.++.++++|+.+...+ +.+.+..|++++++++++++.+
T Consensus        64 ~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~  143 (260)
T TIGR00950        64 YFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALG  143 (260)
T ss_pred             HHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999885433 3445568999999999999999


Q ss_pred             HHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHHHHHHHHHH-HHHhhcc
Q 018814          217 LATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSI-FLNTTLN  295 (350)
Q Consensus       217 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~  295 (350)
                      .++.|+..++.+.++.....+...++.+++.+.....++..       ..+...|..++..++++....+.. ++++++.
T Consensus       144 ~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  216 (260)
T TIGR00950       144 TVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-------QALSLQWGALLYLGLIGTALAYFLWNKGLTLV  216 (260)
T ss_pred             HHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-------CcchHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            99999998744433455555778888888877766543321       113345566777887776655555 6899999


Q ss_pred             chhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHH
Q 018814          296 SAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGS  339 (350)
Q Consensus       296 ~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~  339 (350)
                      ++.+.+...+++|+++.+++++++|| +++..+++|.++++.|+
T Consensus       217 ~~~~~s~~~~~~pv~~~ll~~~~~~E-~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       217 DPSAASILALAEPLVALLLGLLILGE-TLSLPQLIGGALIIAAV  259 (260)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHhCC-CCCHHHHHHHHHHHHhc
Confidence            99999999999999999999999999 99999999999999986

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.95  E-value=6.5e-25  Score=201.14  Aligned_cols=277  Identities=10%  Similarity=-0.036  Sum_probs=192.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHH
Q 018814           43 RGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLM  122 (350)
Q Consensus        43 ~~~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (350)
                      ++.+..++-.+.+.......|.. .++   +|..+.++|++++.+++......++.. ++..        ++..+++++.
T Consensus         8 ~g~~~~l~a~~~wg~~~~~~k~~-~~~---~~~~~~~~R~~~a~~~l~~~~~~~~~~-~~~~--------~~~~~~~~~~   74 (296)
T PRK15430          8 QGVLLALAAYFIWGIAPAYFKLI-YYV---PADEILTHRVIWSFFFMVVLMSICRQW-SYLK--------TLIQTPQKIF   74 (296)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHh-cCC---CHHHHHHHHHHHHHHHHHHHHHHHccH-HHHH--------HHHcCHHHHH
Confidence            44444444445555555566875 444   689999999999987665443322110 0000        0001233433


Q ss_pred             HHhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccCcccchhH
Q 018814          123 HTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFG  202 (350)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G  202 (350)
                      .....+++...+..+++++++++|++.++++.++.|+++++++++++|||+++++|.+++++++|+.++..++.+.    
T Consensus        75 ~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~----  150 (296)
T PRK15430         75 MLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSL----  150 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCc----
Confidence            3334447778889999999999999999999999999999999999999999999999999999999865332222    


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHHHH
Q 018814          203 YAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAF  282 (350)
Q Consensus       203 ~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  282 (350)
                      ..++++++++||.|.++.|+..++...+......|+.+++.+...+..   .+..  .... ......+..+...++.+.
T Consensus       151 ~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~-~~~~~~~~~~~~~g~~t~  224 (296)
T PRK15430        151 PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIA---DSST--SHMG-QNPMSLNLLLIAAGIVTT  224 (296)
T ss_pred             cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHc---cCCc--cccc-CCcHHHHHHHHHHHHHHH
Confidence            256888999999999999887543222333444555555544432211   1100  0000 111122344555565555


Q ss_pred             HHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhh
Q 018814          283 FLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYA  343 (350)
Q Consensus       283 ~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~  343 (350)
                      ....+.++++++.+|...++..+++|++++++|++++|| ++++.+++|+++++.|+.+..
T Consensus       225 i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E-~~~~~~~~G~~lI~~~~~v~~  284 (296)
T PRK15430        225 VPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGE-KPGADKMVTFAFIWVALAIFV  284 (296)
T ss_pred             HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH
Confidence            666666799999999999999999999999999999999 999999999999988877665

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.94  E-value=4.8e-26  Score=189.23  Aligned_cols=287  Identities=24%  Similarity=0.385  Sum_probs=252.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHH
Q 018814           43 RGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLM  122 (350)
Q Consensus        43 ~~~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (350)
                      .+....+.|+.+++.+++.||++++..+|+-.+.+.+.|.+++.+.+.+++..+..+++                ..+.+
T Consensus         6 s~~~~~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR----------------~t~aK   69 (309)
T COG5070           6 SELTASLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFR----------------LTKAK   69 (309)
T ss_pred             ccchHHHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhee----------------hhhhh
Confidence            34667889999999999999999999999999999999999999988888887766543                34678


Q ss_pred             HHhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccCc------
Q 018814          123 HTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL------  196 (350)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~------  196 (350)
                      .++|+++...+..+....+++|.+++.+++.++++.+.++..+..++|.|++..+..+-++++.....+.++|.      
T Consensus        70 ~WfpiSfLLv~MIyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~  149 (309)
T COG5070          70 KWFPISFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFK  149 (309)
T ss_pred             hhcCHHHHHHHHHHhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHH
Confidence            88999999999999999999999999999999999999999999999999999999999999999988888886      


Q ss_pred             --ccchhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHH
Q 018814          197 --SFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVL  274 (350)
Q Consensus       197 --~~~~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l  274 (350)
                        ..+ .|++|.....+..+.+....|+..+-.+....+.++|+++++.|.+..+.+..+||..- +.........+...
T Consensus       150 ~~~lN-~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~-n~annl~~d~l~am  227 (309)
T COG5070         150 AQILN-PGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPG-NLANNLSVDSLMAM  227 (309)
T ss_pred             hcccC-CceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcc-hhhcCCChHHHHHH
Confidence              344 69999999999999999999998875567788999999999999999999999987542 11112223345678


Q ss_pred             HHHHHHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhheec
Q 018814          275 CFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKLV  348 (350)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~~~  348 (350)
                      ..+|+++++..++.-|++|.++.++.++.+.+......+.|.++|+| +.+...+....+-..+..+|.+.|.+
T Consensus       228 ~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffda-p~nf~si~sillGflsg~iYavaks~  300 (309)
T COG5070         228 FISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDA-PVNFLSIFSILLGFLSGAIYAVAKSK  300 (309)
T ss_pred             HHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCC-chhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            89999999999999999999999999999999999999999999999 99999999999999999999876543

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.93  E-value=5.7e-24  Score=185.07  Aligned_cols=287  Identities=21%  Similarity=0.248  Sum_probs=237.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccch-HHHHH
Q 018814           45 ANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPL-KTLMH  123 (350)
Q Consensus        45 ~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  123 (350)
                      +..++.|+++|++.++++|+.-.  +|++|.+++.+|+++-++.....++....+.++         .+...++ +.+|+
T Consensus        18 L~lVl~yY~~Si~Ltf~~~~~~~--~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r---------~r~~~sw~~~Lr~   86 (349)
T KOG1443|consen   18 LALVLLYYFLSIGLTFYFKWLTK--NFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPR---------ARVVLSWRDYLRR   86 (349)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhhc--CcCCchHHHHHHHHHHHHHHHHHHHHHhccCCc---------cccCCcHHHHHHH
Confidence            55669999999999999999865  468899999999998888776665543322111         0122444 46778


Q ss_pred             HhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccCcccchhHH
Q 018814          124 TLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGY  203 (350)
Q Consensus       124 ~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~  203 (350)
                      ..|.|+.-++...+.|++++|++++.+++.++.+++|+.+++..+.-||+++.-.+.++++.+|+.+.+..+.+++..|.
T Consensus        87 ~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf  166 (349)
T KOG1443|consen   87 LAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGF  166 (349)
T ss_pred             hhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhH
Confidence            88999999999999999999999999999999999999999999999999999999999999999999998888999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccCC---CChhhHHHHHHHHHHHHHHHHHHHhccchhh-----hcCCCccc-hhHHHHH
Q 018814          204 AVVFLANITTAIYLATIARIGKSSG---LNSFGLMWCNGVICGPLLLLWTFLRGDLETT-----INFPYLLS-PGFLVVL  274 (350)
Q Consensus       204 ~l~l~sa~~~a~~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-----~~~~~~~~-~~~~~~l  274 (350)
                      .+...++++.++...++|+++++.+   .+|....+...+.....++|..+..+.....     ++.....+ ......+
T Consensus       167 ~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i  246 (349)
T KOG1443|consen  167 FLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLI  246 (349)
T ss_pred             HHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHH
Confidence            9999999999999999999987543   5788888888888888888776555432211     11111111 1122456


Q ss_pred             HHHHHHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhh
Q 018814          275 CFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYA  343 (350)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~  343 (350)
                      ...|.++++.-++-|....+++..+.++.+.+|.+.+.++|.++.+| .++..+|.|.++...|+..+.
T Consensus       247 ~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d-~ls~lN~~Gl~i~~agi~~~~  314 (349)
T KOG1443|consen  247 SLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKD-QLSLLNWLGLAICLAGILLHR  314 (349)
T ss_pred             HHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhc-chhhhHHHHHHHHHHHHHHhc
Confidence            67778888888888999999999999999999999999999999999 999999999999999999983

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.93  E-value=4.1e-23  Score=188.72  Aligned_cols=271  Identities=13%  Similarity=0.099  Sum_probs=205.4

Q ss_pred             HHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHHHHhhHHHHHHHHHHHh
Q 018814           59 VMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVS  138 (350)
Q Consensus        59 ~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (350)
                      ...++.+-++ +++.|.+-+++-++.-.++.......++.+ +          +.....++++++.+.+|++....+++.
T Consensus        29 ~~~s~~l~~~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~-~----------~~~~~~~~~~w~y~lla~~Dv~aN~~~   96 (334)
T PF06027_consen   29 GTFSSLLANK-GVNIPTFQSFFNYVLLALVYTPILLYRRGF-K----------KWLKVLKRPWWKYFLLALLDVEANYLV   96 (334)
T ss_pred             HHHHHHHHhc-CccCcHHHHHHHHHHHHHHHhhhhhhcccc-c----------cchhhcchhHHHHHHHHHHHHHHHHHH
Confidence            4455666555 788888777666654444332222222111 0          011123456777888899999999999


Q ss_pred             hhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccCc---------ccchhHHHHHHHH
Q 018814          139 VESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL---------SFDFFGYAVVFLA  209 (350)
Q Consensus       139 ~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~---------~~~~~G~~l~l~s  209 (350)
                      +.|++|++++.++++.+++.+++++++++++|+|+++.++.|++++++|++++...|.         +....|++++++|
T Consensus        97 v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~  176 (334)
T PF06027_consen   97 VLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLG  176 (334)
T ss_pred             HHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999988655442         2347899999999


Q ss_pred             HHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHHHHHHHHHHH
Q 018814          210 NITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIF  289 (350)
Q Consensus       210 a~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  289 (350)
                      +++||+++++.|+..+  +.+..+...+..+++.++..+..... |..+..+..  ++...+..++..+++-+......-
T Consensus       177 a~lya~~nV~~E~~v~--~~~~~~~lg~~Glfg~ii~~iq~~il-e~~~i~~~~--w~~~~~~~~v~~~~~lf~~y~l~p  251 (334)
T PF06027_consen  177 AILYAVSNVLEEKLVK--KAPRVEFLGMLGLFGFIISGIQLAIL-ERSGIESIH--WTSQVIGLLVGYALCLFLFYSLVP  251 (334)
T ss_pred             HHHHHHHHHHHHHhcc--cCCHHHHHHHHHHHHHHHHHHHHHhe-ehhhhhccC--CChhhHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999998  56788888888888888776655433 433333322  233444444444444444444445


Q ss_pred             HHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhhee
Q 018814          290 LNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKL  347 (350)
Q Consensus       290 ~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~~  347 (350)
                      ..++..+|+..++.-....+.+.+.+++++|+ ++++..++|.+++++|.++|+..+.
T Consensus       252 ~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~-~~~~ly~~af~lIiiG~vvy~~~~~  308 (334)
T PF06027_consen  252 IVLRMSSATFFNLSLLTSDFYALIIDIFFFGY-KFSWLYILAFALIIIGFVVYNLAES  308 (334)
T ss_pred             HHHHhCccceeehHHHHhhHHHHHHHHHhcCc-cccHHHHHHHHHHHHHhheEEccCC
Confidence            77899999999998888899999999999999 9999999999999999999987543

Some of the sequences in this family are annotated as putative membrane proteins.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.89  E-value=4.5e-21  Score=174.53  Aligned_cols=270  Identities=15%  Similarity=0.118  Sum_probs=181.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHHHHhhH
Q 018814           48 AISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPL  127 (350)
Q Consensus        48 ~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (350)
                      .++...+....+..+|...++.   ++.  .+.+...+.+++.+....+..+ ++          .+..+++.+......
T Consensus         6 ~~~aa~~~a~~~~~~k~~~~~~---~~~--~~~~~~~~~~~l~~~~~~~~~~-~~----------~~~~~~~~~~~~~~~   69 (281)
T TIGR03340         6 VVFSALMHAGWNLMAKSHADKE---PDF--LWWALLAHSVLLTPYGLWYLAQ-VG----------WSRLPATFWLLLAIS   69 (281)
T ss_pred             HHHHHHHHHHHHHHHhhcCCch---hHH--HHHHHHHHHHHHHHHHHHhccc-CC----------CCCcchhhHHHHHHH
Confidence            3344455555666778666542   333  4555555555554443322111 00          111233444444555


Q ss_pred             HHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccC-cccchhHHHHH
Q 018814          128 AVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARD-LSFDFFGYAVV  206 (350)
Q Consensus       128 ~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~-~~~~~~G~~l~  206 (350)
                      +........+.+.++++.+++.++.+.++.|+++.+++++++|||+++++|.|+.++++|+.+...++ .+.+..|+.++
T Consensus        70 ~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~  149 (281)
T TIGR03340        70 AVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWA  149 (281)
T ss_pred             HHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHH
Confidence            57788889999999999999999999999999999999999999999999999999999998754333 23445788899


Q ss_pred             HHHHHHHHHHHHHHHHhhccCCCChhh----HHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHHHH
Q 018814          207 FLANITTAIYLATIARIGKSSGLNSFG----LMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAF  282 (350)
Q Consensus       207 l~sa~~~a~~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  282 (350)
                      ++++++|+.|.+..|+..+  +.++..    ...++....+....+.....++..     ....+...+..+...++.+.
T Consensus       150 l~aal~~a~~~i~~k~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~s~  222 (281)
T TIGR03340       150 LAAALGTAIYSLSDKAAAL--GVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRS-----MFPYARQILPSATLGGLMIG  222 (281)
T ss_pred             HHHHHHHHHhhhhcccccc--chhcccccHHHHHHHHHHHHHHHHHHHHHHhccc-----hhhhHHHHHHHHHHHHHHHH
Confidence            9999999999998887654  223222    222332222111111111111110     00111222333333444444


Q ss_pred             HHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHH
Q 018814          283 FLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGL  341 (350)
Q Consensus       283 ~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~  341 (350)
                      ......++++++.++...+...+++|+++.++|++++|| +++..+++|++++++|+.+
T Consensus       223 l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE-~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       223 GAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNE-RWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCC-CccHHHHHHHHHHHHhHHh
Confidence            444455799999999999999999999999999999999 9999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.89  E-value=1.4e-20  Score=164.19  Aligned_cols=284  Identities=18%  Similarity=0.167  Sum_probs=238.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhc-----------CCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCcc
Q 018814           48 AISYMACAVLLVMFNKAALSS-----------YNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFV  116 (350)
Q Consensus        48 ~l~~~~~~~~~~~~~K~~l~~-----------~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (350)
                      -++|++..+-.+++...+++|           -.|.++.++.++|-+.+.++-+.+..+...+.               .
T Consensus        14 ~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~~---------------~   78 (327)
T KOG1581|consen   14 LLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKWWKKEL---------------S   78 (327)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhcccccC---------------C
Confidence            344556666666666777764           26888999999999999988876655433221               1


Q ss_pred             chHHHHHHhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeecc--
Q 018814          117 PLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR--  194 (350)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~--  194 (350)
                      ..+-+++...+++....+..+++.|++|++-++..+.+++--+-++++..++.|+|++.++++...++..|+.+....  
T Consensus        79 ~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~  158 (327)
T KOG1581|consen   79 GVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPN  158 (327)
T ss_pred             CCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecC
Confidence            223467788889999999999999999999999999999999999999999999999999999999999999884332  


Q ss_pred             -C------cccchhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccc
Q 018814          195 -D------LSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLS  267 (350)
Q Consensus       195 -~------~~~~~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  267 (350)
                       |      .+.++.|+.+...+.++.++.+..+.++.++++.+++.++++.++++.+......+..|.+.+...+-. .+
T Consensus       159 s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~-~h  237 (327)
T KOG1581|consen  159 SDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIK-EH  237 (327)
T ss_pred             CCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHH-cC
Confidence             1      124589999999999999999999999999999999999999999999988877666666554444332 34


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhhee
Q 018814          268 PGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKL  347 (350)
Q Consensus       268 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~~  347 (350)
                      +..+.-++..+.++.+.+.+.+.-+++.++.+.+.....+.++++.+|.+.||+ ++++.||.|..++++|..+-.+.|+
T Consensus       238 p~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h-~~s~~q~~g~~iVFg~i~l~~~~k~  316 (327)
T KOG1581|consen  238 PDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGH-PLSSEQWLGVLIVFGGIFLEILLKK  316 (327)
T ss_pred             hhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCC-ccchhhccCeeeehHHHHHHHHHHH
Confidence            667788899999999999999999999999999999999999999999999999 9999999999999999988876554


Q ss_pred             c
Q 018814          348 V  348 (350)
Q Consensus       348 ~  348 (350)
                      +
T Consensus       317 ~  317 (327)
T KOG1581|consen  317 K  317 (327)
T ss_pred             h
Confidence            4

>TIGR00688 rarD rarD protein

Probab=99.88  E-value=2.8e-20  Score=167.12  Aligned_cols=250  Identities=8%  Similarity=-0.027  Sum_probs=167.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHc-cccccccCCCCccCCCCCCccch-HHHH
Q 018814           45 ANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRW-KIINFTMGDSLMTSDSSSTFVPL-KTLM  122 (350)
Q Consensus        45 ~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~  122 (350)
                      ....++..+.+.......|. ..+.   +|..+.++|++++.+++.+.... ++++... ++       .++.++ +.+.
T Consensus         4 ~~~~i~a~~~wg~~~~~~k~-~~~~---~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~   71 (256)
T TIGR00688         4 IIVSLLASFLFGYMYYYSKL-LKPL---PATDILGHRMIWSFPFMLLSVTLFRQWAALI-ER-------LKRIQKRPLIL   71 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHH-hccC---CHHHHHHHHHHHHHHHHHHHHHHHcchHHHH-HH-------HhCcccchHHH
Confidence            34444444445555556798 4555   79999999999998776554322 2111000 00       000112 2233


Q ss_pred             HHhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccCcccchhH
Q 018814          123 HTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFG  202 (350)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G  202 (350)
                      .....|++...+..+++.|++++++++++++.++.|+++++++++++|||+++++|++++++++|+.++..++.+.+   
T Consensus        72 ~~~~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~---  148 (256)
T TIGR00688        72 SLLLCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP---  148 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch---
Confidence            45556677888999999999999999999999999999999999999999999999999999999987644322221   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHHHH
Q 018814          203 YAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAF  282 (350)
Q Consensus       203 ~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  282 (350)
                       .++++++++||.|.+..|+..++   +..+.... .....++..+.... .++...   ........|..+...|+++.
T Consensus       149 -~~~l~aa~~~a~~~i~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~l~~~g~~t~  219 (256)
T TIGR00688       149 -WEALVLAFSFTAYGLIRKALKNT---DLAGFCLE-TLSLMPVAIYYLLQ-TDFATV---QQTNPFPIWLLLVLAGLITG  219 (256)
T ss_pred             -HHHHHHHHHHHHHHHHHhhcCCC---CcchHHHH-HHHHHHHHHHHHHH-hccCcc---cccCchhHHHHHHHHHHHHH
Confidence             46889999999999999887542   22222221 22222232222111 111110   11111224566667777755


Q ss_pred             HHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHH
Q 018814          283 FLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWIL  318 (350)
Q Consensus       283 ~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~  318 (350)
                      ......++++|+.+|.+.++..+++|+++.++|+++
T Consensus       220 i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       220 TPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            555566799999999999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.88  E-value=4.3e-19  Score=161.74  Aligned_cols=275  Identities=16%  Similarity=0.136  Sum_probs=197.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHHHHh
Q 018814           46 NAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTL  125 (350)
Q Consensus        46 ~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (350)
                      ...+++...+.......|...+.  ..++......|...+..........+.....           +  ..++.++..+
T Consensus        10 ~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~--~~~~~~~~~~   74 (292)
T COG0697          10 LALLLWGLLWGLSFIALKLAVES--LDPFLFAAALRFLIAALLLLPLLLLEPRGLR-----------P--ALRPWLLLLL   74 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcc--cCChHHHHHHHHHHHHHHHHHHHHhhccccc-----------c--cccchHHHHH
Confidence            33444444444444455666654  2245556666999888774333332211000           0  1111233444


Q ss_pred             hHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHH-HHhccccCcchhhhHHHhhhhceeeeccCcccc---hh
Q 018814          126 PLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEY-FLAGQKYTPPVVGSVGLIILGAFVAGARDLSFD---FF  201 (350)
Q Consensus       126 ~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~-~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~---~~  201 (350)
                      ..++.......+++.++++++++.++.+.++.|+++.+++. +++|||++++++.++++.++|+.++..++...+   ..
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~  154 (292)
T COG0697          75 LALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLL  154 (292)
T ss_pred             HHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHH
Confidence            44578888899999999999999999999999999999997 777999999999999999999999777655432   48


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHH-HHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHH
Q 018814          202 GYAVVFLANITTAIYLATIARIGKSSGLNSFGLMW-CNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCIL  280 (350)
Q Consensus       202 G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  280 (350)
                      |+.+++.+++++|++.+..|+..   +.++..... ++.........+...  .+.      +.......+..+...+++
T Consensus       155 g~~~~l~a~~~~a~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~--~~~------~~~~~~~~~~~~~~~g~~  223 (292)
T COG0697         155 GLLLALAAALLWALYTALVKRLS---RLGPVTLALLLQLLLALLLLLLFFL--SGF------GAPILSRAWLLLLYLGVF  223 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHHh--ccc------cccCCHHHHHHHHHHHHH
Confidence            99999999999999999999887   345555555 444422222222111  111      012234456777888888


Q ss_pred             HHH-HHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhhee
Q 018814          281 AFF-LNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKL  347 (350)
Q Consensus       281 ~~~-~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~~  347 (350)
                      +.. ..+..++.+++.++...+...+.+|+.+.+++++++|| +++..+++|+++++.|+.+...+++
T Consensus       224 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e-~~~~~~~~G~~li~~g~~l~~~~~~  290 (292)
T COG0697         224 STGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGE-PLSPAQLLGAALVVLGVLLASLRAR  290 (292)
T ss_pred             HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCC-CCcHHHHHHHHHHHHHHHHHhcccc
Confidence            775 44455799999999999999999999999999999999 9999999999999999999987643

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.85  E-value=1.2e-20  Score=158.39  Aligned_cols=258  Identities=18%  Similarity=0.151  Sum_probs=215.5

Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHHHHhhHHHHHHHHHHHhhhhhcccchhH
Q 018814           70 NFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPM  149 (350)
Q Consensus        70 ~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~  149 (350)
                      .|.+...+.++|..+..+..-++...+...               +++...-+.....++-|.+..+..|.|++|+|-++
T Consensus        49 ~FTfalaLVf~qC~~N~vfAkvl~~ir~~~---------------~~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPT  113 (337)
T KOG1580|consen   49 KFTFALALVFFQCTANTVFAKVLFLIRKKT---------------EIDNTPTKMYAACSASYLLAMVSSNQALQYVPYPT  113 (337)
T ss_pred             eehHHHHHHHHHHHHHHHHHHhheeecccc---------------cccCCcchHHHHHHHHHHHHHHhccchhcccCCcH
Confidence            377788889999988887765544332211               12222234566677899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccC-------cccchhHHHHHHHHHHHHHHHHHHHHH
Q 018814          150 YTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARD-------LSFDFFGYAVVFLANITTAIYLATIAR  222 (350)
Q Consensus       150 ~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~-------~~~~~~G~~l~l~sa~~~a~~~v~~~~  222 (350)
                      ..+-+++-|+-++++..++.|++++|++++.++++++|+++....+       .+..-.|-++.++|....++....+.+
T Consensus       114 qVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdr  193 (337)
T KOG1580|consen  114 QVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDR  193 (337)
T ss_pred             HHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHH
Confidence            9999999999999999999999999999999999999999854321       122237999999999999999999999


Q ss_pred             hhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH
Q 018814          223 IGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTI  302 (350)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~sv  302 (350)
                      +.+.++.+..+++++.++.+.+.+....+++||.+...-+. ...+..|+-+...++.+.+.+.+.|..+...+|.+.|+
T Consensus       194 ira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~-~RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSi  272 (337)
T KOG1580|consen  194 IRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFV-QRHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSI  272 (337)
T ss_pred             HHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHH-HhccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEE
Confidence            98888888899999999999999988888899976544332 23456677888889999999999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhh
Q 018814          303 CGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAY  344 (350)
Q Consensus       303 ~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~  344 (350)
                      ....+..++++.|+++|++ +++..||.|.++++.|...-..
T Consensus       273 vTTTRKfFTil~SVllf~n-pls~rQwlgtvlVF~aL~~D~~  313 (337)
T KOG1580|consen  273 VTTTRKFFTILISVLLFNN-PLSGRQWLGTVLVFSALTADVV  313 (337)
T ss_pred             EeehHHHHHHHHHHHHhcC-cCcHHHHHHHHHHHHHhhhHhh
Confidence            9999999999999999999 9999999999999999876554

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.83  E-value=2.2e-18  Score=146.66  Aligned_cols=250  Identities=17%  Similarity=0.117  Sum_probs=203.9

Q ss_pred             HHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHHHHhhHHHHHHHHHHHhhh
Q 018814           61 FNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVE  140 (350)
Q Consensus        61 ~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (350)
                      +.|.++...   .|.-.+++|..++.+++....+-.+.+                .++++++.....|......+.++|.
T Consensus        30 ~Ak~LFP~v---G~~g~t~lRl~~aaLIll~l~RPwr~r----------------~~~~~~~~~~~yGvsLg~MNl~FY~   90 (292)
T COG5006          30 FAKSLFPLV---GAAGVTALRLAIAALILLALFRPWRRR----------------LSKPQRLALLAYGVSLGGMNLLFYL   90 (292)
T ss_pred             HHHHHcccc---ChhhHHHHHHHHHHHHHHHHhhHHHhc----------------cChhhhHHHHHHHHHHHHHHHHHHH
Confidence            568888765   678899999999999987766533332                5567889999999999999999999


Q ss_pred             hhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeec---cCcccchhHHHHHHHHHHHHHHHH
Q 018814          141 SVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGA---RDLSFDFFGYAVVFLANITTAIYL  217 (350)
Q Consensus       141 al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~---~~~~~~~~G~~l~l~sa~~~a~~~  217 (350)
                      +++.+|.+.+..+-++.|+.+.+++    .+|  .++...+.+.+.|..+...   +..+.|+.|..+++.++.||+.|.
T Consensus        91 si~riPlGiAVAiEF~GPL~vA~~~----sRr--~~d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YI  164 (292)
T COG5006          91 SIERIPLGIAVAIEFTGPLAVALLS----SRR--LRDFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYI  164 (292)
T ss_pred             HHHhccchhhhhhhhccHHHHHHHh----ccc--hhhHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHH
Confidence            9999999999999999999877655    333  3445556677777776432   224678899999999999999999


Q ss_pred             HHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHHHHHHHHHH-HHHhhccc
Q 018814          218 ATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSI-FLNTTLNS  296 (350)
Q Consensus       218 v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~  296 (350)
                      +..||..+  ..+..+-+.+.+.++.++.+|+.....       -+...++.....-+..++++....|+. ..++++.+
T Consensus       165 v~G~r~g~--~~~g~~g~a~gm~vAaviv~Pig~~~a-------g~~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp  235 (292)
T COG5006         165 VLGQRAGR--AEHGTAGVAVGMLVAALIVLPIGAAQA-------GPALFSPSLLPLALGVAVLSSALPYSLEMIALRRLP  235 (292)
T ss_pred             HHcchhcc--cCCCchHHHHHHHHHHHHHhhhhhhhc-------chhhcChHHHHHHHHHHHHhcccchHHHHHHHhhCC
Confidence            99999986  456777888888899998888776332       233445566667788888999998988 78999999


Q ss_pred             hhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhh
Q 018814          297 AVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYY  345 (350)
Q Consensus       297 a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~  345 (350)
                      +.++++..++||.++.+.|++++|| .+|+.||.|++.++.++.-.+..
T Consensus       236 ~~~F~~LlSLePa~aAl~G~i~L~e-~ls~~qwlaI~~ViaAsaG~~lt  283 (292)
T COG5006         236 ARTFGTLLSLEPALAALSGLIFLGE-TLTLIQWLAIAAVIAASAGSTLT  283 (292)
T ss_pred             hhHHHHHHHhhHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHhccccc
Confidence            9999999999999999999999999 99999999999999988755443

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.81  E-value=1.3e-20  Score=161.02  Aligned_cols=277  Identities=10%  Similarity=0.021  Sum_probs=203.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHH
Q 018814           43 RGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLM  122 (350)
Q Consensus        43 ~~~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (350)
                      .++.....-+.++.++.+..|.+..     .|..+...|+++-.++.++.....+..+  ..|          .+.+  +
T Consensus        38 ~gl~l~~vs~ff~~~~vv~t~~~e~-----~p~e~a~~r~l~~mlit~pcliy~~~~v--~gp----------~g~R--~   98 (346)
T KOG4510|consen   38 LGLLLLTVSYFFNSCMVVSTKVLEN-----DPMELASFRLLVRMLITYPCLIYYMQPV--IGP----------EGKR--K   98 (346)
T ss_pred             cCceehhhHHHHhhHHHhhhhhhcc-----ChhHhhhhhhhhehhhhheEEEEEeeee--ecC----------CCcE--E
Confidence            3343333335667777666665542     4677777776655554444332221111  011          0001  1


Q ss_pred             HHhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccCc------
Q 018814          123 HTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL------  196 (350)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~------  196 (350)
                      .++.-|+.-.......|+|++|.+.+.+.++..++|+||.++++.++||++++.+.++..+.+.|++++..+.+      
T Consensus        99 ~LiLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t  178 (346)
T KOG4510|consen   99 WLILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTT  178 (346)
T ss_pred             EEEeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCc
Confidence            12222433344456788999999999999999999999999999999999999999999999999999754321      


Q ss_pred             --------ccchhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccch
Q 018814          197 --------SFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSP  268 (350)
Q Consensus       197 --------~~~~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  268 (350)
                              +.+..|...++.|+++-|--.+..|++.|  +.+......|-..++.+..++.....+++.      ..+..
T Consensus       179 ~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk--~~h~~msvsyf~~i~lV~s~I~~~~ig~~~------lP~cg  250 (346)
T KOG4510|consen  179 EGEDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGK--NAHAIMSVSYFSLITLVVSLIGCASIGAVQ------LPHCG  250 (346)
T ss_pred             cccccccccccCCchHHHHHhHhhhhhHHHHHHHhhc--cccEEEEehHHHHHHHHHHHHHHhhcccee------cCccc
Confidence                    23356888889999988888888999987  556666667777777777776655555432      22345


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhhee
Q 018814          269 GFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKL  347 (350)
Q Consensus       269 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~~  347 (350)
                      ..|++++..|+++++.+......+++-.|...++..+.+-+++.++-+++||| .+|++.|+|+++++.+..+....|.
T Consensus       251 kdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~-~Pt~ws~~Ga~~vvsS~v~~a~~kw  328 (346)
T KOG4510|consen  251 KDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGH-WPTIWSWVGAVMVVSSTVWVALKKW  328 (346)
T ss_pred             cceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcC-CChHHHhhceeeeehhHHHHHHHHH
Confidence            55678889999999999999989888888899999999999999999999999 9999999999999988887776553

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.81  E-value=3.3e-18  Score=153.21  Aligned_cols=224  Identities=17%  Similarity=0.153  Sum_probs=173.4

Q ss_pred             HHHHHHhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccCc--
Q 018814          119 KTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL--  196 (350)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~--  196 (350)
                      +..+.-+.++..+++.+++++.||++++++..+++.+++-+||..++.++..||+++.+.+++.+.++|+++++.+|.  
T Consensus       157 ~~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~  236 (416)
T KOG2765|consen  157 QTAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ  236 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence            455566677889999999999999999999999999999999999999999999999999999999999999876632  


Q ss_pred             ------ccchhHHHHHHHHHHHHHHHHHHHHHhhccC--CCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccch
Q 018814          197 ------SFDFFGYAVVFLANITTAIYLATIARIGKSS--GLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSP  268 (350)
Q Consensus       197 ------~~~~~G~~l~l~sa~~~a~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  268 (350)
                            +-...|.+++++||+.||.|.++.||...++  +.|-.....|..++..+++.|..++.... ....++.+...
T Consensus       237 ~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~-~~e~F~lP~~~  315 (416)
T KOG2765|consen  237 NSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFF-GEERFELPSST  315 (416)
T ss_pred             cccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHh-ccCcccCCCCc
Confidence                  2236899999999999999999999988765  34444455566666666666544332111 11122222333


Q ss_pred             hHHHHHHHHHHH-HHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhh
Q 018814          269 GFLVVLCFSCIL-AFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYY  345 (350)
Q Consensus       269 ~~~~~l~~~~~~-~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~  345 (350)
                      .+ ..++..+++ .++-.|...+++-.++|.++++-..+..+++++.-.++=|. ++++.+++|.+.+++|.+..++.
T Consensus       316 q~-~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~-~~S~~~iiGsi~Ifv~Fv~vn~~  391 (416)
T KOG2765|consen  316 QF-SLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGK-HPSALYIIGSIPIFVGFVIVNIS  391 (416)
T ss_pred             ee-EeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCC-CCCHHHHHHHHHHHHHHhheecc
Confidence            33 334444444 55666777788999999999998888888877777665566 99999999999999999998864

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.78  E-value=1.6e-16  Score=144.92  Aligned_cols=262  Identities=13%  Similarity=0.127  Sum_probs=184.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHHHH
Q 018814           45 ANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHT  124 (350)
Q Consensus        45 ~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (350)
                      ++.+++|+...+    ..|.+.   +++++. +.  |+.++.+++.......+.  ++            ...++.+..-
T Consensus         7 lia~~~wGs~g~----~~k~~~---g~~~~~-~~--~~~~g~l~~~~~~~~~~~--~~------------~~~~~~~~~g   62 (290)
T TIGR00776         7 LIPALFWGSFVL----INVKIG---GGPYSQ-TL--GTTFGALILSIAIAIFVL--PE------------FWALSIFLVG   62 (290)
T ss_pred             HHHHHHHhhhHH----HHhccC---CCHHHH-HH--HHHHHHHHHHHHHHHHhC--Cc------------ccccHHHHHH
Confidence            344555555444    447654   333333 32  677777666544332111  00            0112334444


Q ss_pred             hhHHHHHHHHHHHhhhhhcccchhHHHHHHH-HHHHHHHHHHHHHhccccCcch----hhhHHHhhhhceeeeccCcc--
Q 018814          125 LPLAVAYLLYMVVSVESVRGVNVPMYTTLRR-TTVAFTMIMEYFLAGQKYTPPV----VGSVGLIILGAFVAGARDLS--  197 (350)
Q Consensus       125 ~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~-~~p~~~~l~~~~~~~e~~~~~~----~~~~~l~~~Gv~l~~~~~~~--  197 (350)
                      +..|+.+...+++++.+.++++++.+..+.+ +.+++..+.+.+++||+.++++    +.++++.++|+.+....+.+  
T Consensus        63 ~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~  142 (290)
T TIGR00776        63 LLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSA  142 (290)
T ss_pred             HHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecccccc
Confidence            4555778899999999999999999998888 8889999999999999999999    99999999999986432211  


Q ss_pred             -----cc-hhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHH---HHHHHHHHHHHHHHhccchhhhcCCCccch
Q 018814          198 -----FD-FFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCN---GVICGPLLLLWTFLRGDLETTINFPYLLSP  268 (350)
Q Consensus       198 -----~~-~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  268 (350)
                           .+ ..|++++++|+++|+.|.+..|+.    ++++.+..+.+   ..++..+..+...   +     + ....+.
T Consensus       143 ~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~---~-----~-~~~~~~  209 (290)
T TIGR00776       143 GIKSEFNFKKGILLLLMSTIGYLVYVVVAKAF----GVDGLSVLLPQAIGMVIGGIIFNLGHI---L-----A-KPLKKY  209 (290)
T ss_pred             ccccccchhhHHHHHHHHHHHHHHHHHHHHHc----CCCcceehhHHHHHHHHHHHHHHHHHh---c-----c-cchHHH
Confidence                 22 689999999999999999999875    36788874444   4444443332221   0     0 011122


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhh-ccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhH----HHHHHHHHHHHHhh
Q 018814          269 GFLVVLCFSCILAFFLNYSIFLNTT-LNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNV----FGQLLGFLGSGLYA  343 (350)
Q Consensus       269 ~~~~~l~~~~~~~~~~~~~~~~~~~-~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~----~G~~li~~g~~~~~  343 (350)
                      ..+.. +..|++....+...+...+ +.++.+.++..+++|+.+++++++++|| +.+..++    +|+++++.|+.+..
T Consensus       210 ~~~~~-~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E-~~~~~~~~~~~iG~~lIi~~~~l~~  287 (290)
T TIGR00776       210 AILLN-ILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGE-KKTKREMIAISVGIILIIIAANILG  287 (290)
T ss_pred             HHHHH-HHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhcc-CCCcceeehhHHHHHHHHHHHHHHh
Confidence            23333 3378775444444457888 9999999999999999999999999999 9999999    99999999998875


Q ss_pred             hh
Q 018814          344 YY  345 (350)
Q Consensus       344 ~~  345 (350)
                      ..
T Consensus       288 ~~  289 (290)
T TIGR00776       288 IG  289 (290)
T ss_pred             cc
Confidence            43

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.78  E-value=1.6e-17  Score=142.50  Aligned_cols=285  Identities=18%  Similarity=0.151  Sum_probs=230.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCC-chHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHHH
Q 018814           45 ANAAISYMACAVLLVMFNKAALSSYNFP-CANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMH  123 (350)
Q Consensus        45 ~~~~l~~~~~~~~~~~~~K~~l~~~~f~-~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (350)
                      ++++.-.++.-+..-.+-..+++.-+|+ +.|.++..|+++=.-+-++-..  .+  ++.         ++.+|   ||.
T Consensus        45 lic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~--~~--~~k---------~r~iP---~rt  108 (367)
T KOG1582|consen   45 LICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQ--LI--QTK---------RRVIP---WRT  108 (367)
T ss_pred             HHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEE--ee--ccc---------ceecc---hhH
Confidence            3333334444455556678888877887 7899999998854332222111  11  111         11133   566


Q ss_pred             HhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccC----cccc
Q 018814          124 TLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARD----LSFD  199 (350)
Q Consensus       124 ~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~----~~~~  199 (350)
                      ...++.+..++..+.+.++.|.+-++-.+.++|-.+-+++.+.++-++|+++.++.+..+...|.++.+..|    .+++
T Consensus       109 Y~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~  188 (367)
T KOG1582|consen  109 YVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFN  188 (367)
T ss_pred             hhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcc
Confidence            677788888899999999999999999999999999999999999999999999999999999999976655    4677


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHH
Q 018814          200 FFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCI  279 (350)
Q Consensus       200 ~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  279 (350)
                      ..|+.+.-++.++.|.-...+++.++..+-+..++.+|...++.++++.....+||....+++...++.......+..+.
T Consensus       189 ~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~  268 (367)
T KOG1582|consen  189 LIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSL  268 (367)
T ss_pred             eeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHH
Confidence            89999999999999999899999998778888999999999999999999999999888887766665555566666666


Q ss_pred             HHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhhe
Q 018814          280 LAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYK  346 (350)
Q Consensus       280 ~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~  346 (350)
                      .+++...+....++..+|.+.+.....+...++++|+++|.. ++|....-|..+++.|+++-.+.|
T Consensus       269 ~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsK-PfT~qy~~~gllv~lgI~Ln~ysk  334 (367)
T KOG1582|consen  269 AGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSK-PFTEQYVWSGLLVVLGIYLNMYSK  334 (367)
T ss_pred             HhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcC-chHHHHhhhhHHHHHHHHhhcccC
Confidence            777776666677899999999999999999999999999988 999999999999999999877655

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.78  E-value=6.1e-17  Score=139.61  Aligned_cols=298  Identities=18%  Similarity=0.154  Sum_probs=212.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhc-----CCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccC-CCCCCccch
Q 018814           45 ANAAISYMACAVLLVMFNKAALSS-----YNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTS-DSSSTFVPL  118 (350)
Q Consensus        45 ~~~~l~~~~~~~~~~~~~K~~l~~-----~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  118 (350)
                      ++..++..++.+..+++.||.=+.     =+|++|..-+..-++--++++......+.+...+....+.. .....+.|.
T Consensus         5 v~ls~imvvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf   84 (372)
T KOG3912|consen    5 VFLSLIMVVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPF   84 (372)
T ss_pred             hhhhhhhhhhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCC
Confidence            344556667788888899997652     24888987777766666666655544433322211111000 000111122


Q ss_pred             HHHHHHhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccCc--
Q 018814          119 KTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL--  196 (350)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~--  196 (350)
                      +. +..++.+++-.....+-|.++.+++++.+|++|....+|+.+++.-+++++++.++|+++....+|++.+...|.  
T Consensus        85 ~p-~lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~  163 (372)
T KOG3912|consen   85 NP-VLFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHL  163 (372)
T ss_pred             Cc-ceecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeeccc
Confidence            22 235567899888899999999999999999999999999999999999999999999999999999998655432  


Q ss_pred             --------ccchhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHh-----ccchhh--hc
Q 018814          197 --------SFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLR-----GDLETT--IN  261 (350)
Q Consensus       197 --------~~~~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~--~~  261 (350)
                              +.-..|+++.+++-+.-|++.++.+|..++.+.+|.+...|...++.+.+.......     ++...-  ..
T Consensus       164 ~~~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g  243 (372)
T KOG3912|consen  164 VTDPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRG  243 (372)
T ss_pred             ccCCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCc
Confidence                    222579999999999999999999999998899999999999988855554333221     211000  00


Q ss_pred             -CCCc--------cchhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHH
Q 018814          262 -FPYL--------LSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQ  332 (350)
Q Consensus       262 -~~~~--------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~  332 (350)
                       +..+        ..+.....+....+...+.|++.....+..|+++-.+...++.....+++.....| .+...|+.|+
T Consensus       244 ~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E-~f~llqilGF  322 (372)
T KOG3912|consen  244 VLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWE-YFHLLQILGF  322 (372)
T ss_pred             chhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHH-HHHHHHHHHH
Confidence             0000        01111112222222233466666677899999999999999999999999999999 9999999999


Q ss_pred             HHHHHHHHHhhh
Q 018814          333 LLGFLGSGLYAY  344 (350)
Q Consensus       333 ~li~~g~~~~~~  344 (350)
                      ++.+.|.++|+.
T Consensus       323 liLi~Gi~lY~~  334 (372)
T KOG3912|consen  323 LILIMGIILYNQ  334 (372)
T ss_pred             HHHHHHHHHHHH
Confidence            999999999983

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.76  E-value=1.3e-16  Score=141.06  Aligned_cols=212  Identities=14%  Similarity=0.119  Sum_probs=169.4

Q ss_pred             chHHHHHHhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccCc
Q 018814          117 PLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL  196 (350)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~  196 (350)
                      ++++..++...+++|...+.+.+.++++++++++++++.+..++|++++++++|||+++++|.++++.++|+.+...++.
T Consensus        13 ~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~   92 (244)
T PF04142_consen   13 SPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSS   92 (244)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCc
Confidence            34667778888999999999999999999999999999999999999999999999999999999999999998532211


Q ss_pred             -----------------ccchhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhh
Q 018814          197 -----------------SFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETT  259 (350)
Q Consensus       197 -----------------~~~~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  259 (350)
                                       .....|.++.++++++.|+..++.||+.|+.+.+.+.........+.++.++.... .|....
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~-~~~~~~  171 (244)
T PF04142_consen   93 QSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLL-SDGSAI  171 (244)
T ss_pred             cccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhc-cccccc
Confidence                             11258999999999999999999999999877666666666677777766655433 233222


Q ss_pred             hcCC--CccchhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHH
Q 018814          260 INFP--YLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLL  334 (350)
Q Consensus       260 ~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~l  334 (350)
                      .+..  ..++...|..++..++.|....    ..+|+.+...-+....+..+.+.++++.+||. ++|....+|.++
T Consensus       172 ~~~g~f~G~~~~~~~~i~~~a~gGllva----~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~-~~s~~f~lg~~~  243 (244)
T PF04142_consen  172 SESGFFHGYSWWVWIVIFLQAIGGLLVA----FVLKYADNIVKGFATAVSIVLTAVLSVLLFGF-PPSLSFLLGAAL  243 (244)
T ss_pred             ccCCchhhcchHHHHHHHHHHHhhHHHH----HHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCC-CCchHHhhheec
Confidence            2211  2234445566666666666655    45699999999999999999999999999998 999999999765

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.74  E-value=3.5e-15  Score=130.58  Aligned_cols=278  Identities=14%  Similarity=0.083  Sum_probs=207.9

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcc--ccccccCCCCccCCCCCCccchH
Q 018814           42 RRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWK--IINFTMGDSLMTSDSSSTFVPLK  119 (350)
Q Consensus        42 ~~~~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  119 (350)
                      .+|.+.++..++.+....++.|.+-. .   ++..+...|.+-+.+.+.......  .+.+.+           ...+.+
T Consensus         6 ~~Gil~~l~Ay~lwG~lp~y~kll~~-~---~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~-----------~~~~p~   70 (293)
T COG2962           6 RKGILLALLAYLLWGLLPLYFKLLEP-L---PATEILAHRVIWSFPFMLALLFLLRQWRELKQ-----------LLKQPK   70 (293)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHcc-C---CHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH-----------HHhCcH
Confidence            46677777777888888888898865 3   788999999998887765543321  111111           001224


Q ss_pred             HHHHHhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccCcccc
Q 018814          120 TLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFD  199 (350)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~  199 (350)
                      .+......++....+...+.+|.+.-.+-.++.=....|++.++++++++|||+++.+|++++++.+||..-.....+++
T Consensus        71 ~~~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lp  150 (293)
T COG2962          71 TLLMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLP  150 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence            55556666788999999999999999999999999999999999999999999999999999999999998777667777


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHH
Q 018814          200 FFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCI  279 (350)
Q Consensus       200 ~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  279 (350)
                      +.    ++.=+++|++|-.. ||..   +.++.+-.......-.|..+.+....++..+   +....+...+..+...|.
T Consensus       151 wv----al~la~sf~~Ygl~-RK~~---~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~---~~~~~~~~~~~LLv~aG~  219 (293)
T COG2962         151 WV----ALALALSFGLYGLL-RKKL---KVDALTGLTLETLLLLPVALIYLLFLADSGQ---FLQQNANSLWLLLVLAGL  219 (293)
T ss_pred             HH----HHHHHHHHHHHHHH-HHhc---CCchHHhHHHHHHHHhHHHHHHHHHHhcCch---hhhcCCchHHHHHHHhhH
Confidence            55    44456788888766 5544   4667776655555555555544444333221   111123445677777777


Q ss_pred             HHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhhe
Q 018814          280 LAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYK  346 (350)
Q Consensus       280 ~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~  346 (350)
                      .+.+-=.....+-++.+=.+.++..|++|...-+++++++|| +++..+.+..+.+-.|.++|..+.
T Consensus       220 vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E-~~~~~~~~~F~~IW~aL~l~~~d~  285 (293)
T COG2962         220 VTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGE-PFDSDQLVTFAFIWLALALFSIDG  285 (293)
T ss_pred             HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHHH
Confidence            665543333477899999999999999999999999999999 999999999999999999998643

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.72  E-value=1.1e-14  Score=130.97  Aligned_cols=225  Identities=16%  Similarity=0.146  Sum_probs=179.5

Q ss_pred             hHHHHHHhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccC--
Q 018814          118 LKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARD--  195 (350)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~--  195 (350)
                      +++..+....++.|.+.+.+++.++.+.+++++++...+..+.|+++..++++||+++++|.++++.++|+.+...+.  
T Consensus        89 ~~~~lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~  168 (345)
T KOG2234|consen   89 PRETLKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLS  168 (345)
T ss_pred             hHHHHHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCC
Confidence            445666777799999998999999999999999999999999999999999999999999999999999999854111  


Q ss_pred             ---------cccchhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhh--hcCCC
Q 018814          196 ---------LSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETT--INFPY  264 (350)
Q Consensus       196 ---------~~~~~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~  264 (350)
                               .+..+.|....+.++++.++..++.+|+.|+.+.+.+-...-...++.++.+...... |....  ..+-.
T Consensus       169 ~~~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~-d~~~i~~~gff~  247 (345)
T KOG2234|consen  169 PTGAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQ-DGEAINEYGFFY  247 (345)
T ss_pred             CCCccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhc-cccccccCCccc
Confidence                     1233689999999999999999999999987665555555555566666655444333 33322  12223


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhh
Q 018814          265 LLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAY  344 (350)
Q Consensus       265 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~  344 (350)
                      .++...|..++..++-|...++.    +|+.+...-+....+..+++.+.|+.+|+. ++|....+|..+++.++.+|..
T Consensus       248 G~s~~vw~vVl~~a~gGLlvs~v----~KyADnIlK~f~~s~aiilt~v~S~~Lf~~-~~t~~F~lG~~lVi~Si~lY~~  322 (345)
T KOG2234|consen  248 GYSSIVWLVVLLNAVGGLLVSLV----MKYADNILKGFSTSVAIILTTVASIALFDF-QLTLYFLLGALLVILSIFLYSL  322 (345)
T ss_pred             cccHHHHHHHHHHhccchhHHHH----HHHhHHHHHHHHHHHHHHHHHHHHHHHccC-CchHHHHHHHHHHHHHHHHhhc
Confidence            35666788888888877777644    588888777788888899999999888887 9999999999999999999996


Q ss_pred             heec
Q 018814          345 YKLV  348 (350)
Q Consensus       345 ~~~~  348 (350)
                      .+.+
T Consensus       323 ~P~~  326 (345)
T KOG2234|consen  323 YPAR  326 (345)
T ss_pred             CCcc
Confidence            5543

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.71  E-value=2.7e-16  Score=129.89  Aligned_cols=142  Identities=32%  Similarity=0.516  Sum_probs=126.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcc-----CCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCC-----c-cchhH
Q 018814          202 GYAVVFLANITTAIYLATIARIGKS-----SGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPY-----L-LSPGF  270 (350)
Q Consensus       202 G~~l~l~sa~~~a~~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-----~-~~~~~  270 (350)
                      |.++++.|.++.|+++++.|+..++     .+.++.++.+|+++.+.+.++|.++..+++........     . .+...
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            7889999999999999999999887     68999999999999999999999888876542221111     1 14466


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhh
Q 018814          271 LVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAY  344 (350)
Q Consensus       271 ~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~  344 (350)
                      +..++..|++++..|++.+.+++++||.+.++.+.+|.+..+++|+++||| ++|..+++|.++.++|+.+|++
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~-~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGE-PITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCC-cCCHHHHHHHHHHHHHHheeeC
Confidence            788999999999999999999999999999999999999999999999999 9999999999999999999975

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.64  E-value=1.3e-15  Score=131.35  Aligned_cols=255  Identities=20%  Similarity=0.286  Sum_probs=191.9

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHHHHhhHHHHHHHHHHHhhhhhcc-cchhHHH
Q 018814           73 CANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVESVRG-VNVPMYT  151 (350)
Q Consensus        73 ~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-~~~s~~~  151 (350)
                      ....+++.|+++-..--++..    -++.         ..+.++|+|++..   .-..++..+.++|+++++ +|.+...
T Consensus        32 sgNLITFaqFlFia~eGlif~----skf~---------~~k~kiplk~Y~i---~V~mFF~vnv~NN~al~f~I~~PlHi   95 (330)
T KOG1583|consen   32 SGNLITFAQFLFIATEGLIFT----SKFF---------TVKPKIPLKDYAI---TVAMFFIVNVTNNYALKFNIPMPLHI   95 (330)
T ss_pred             CeeehHHHHHHHHHHhceeee----cccc---------ccCCCCchhhhhe---ehheeeeeeeeccceeeecccceEEE
Confidence            456789999986543222111    0111         0112366665443   234556677899999998 9999999


Q ss_pred             HHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeec---cCccc--------------c--hhHHHHHHHHHHH
Q 018814          152 TLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGA---RDLSF--------------D--FFGYAVVFLANIT  212 (350)
Q Consensus       152 ~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~---~~~~~--------------~--~~G~~l~l~sa~~  212 (350)
                      ++|+-+++-++++++++.|+|++.+++.++.+..+|+++.+.   .|...              .  ..|+.+...+.+.
T Consensus        96 IfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~  175 (330)
T KOG1583|consen   96 IFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLL  175 (330)
T ss_pred             EEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999998532   22110              0  3688888899999


Q ss_pred             HHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHH-HHhccchhhhcCC-------CccchhHHHHHHHHHHHHHHH
Q 018814          213 TAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWT-FLRGDLETTINFP-------YLLSPGFLVVLCFSCILAFFL  284 (350)
Q Consensus       213 ~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~~~~  284 (350)
                      .|...++++..-++++-++-|.++|....+.|+.+... -...++...+..+       ...-+..|..++.+.+..++.
T Consensus       176 sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~C  255 (330)
T KOG1583|consen  176 SAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYFC  255 (330)
T ss_pred             HHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHHHHHHH
Confidence            99999999999998888999999999998888765432 1111222222211       112355677788887776665


Q ss_pred             HHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhh
Q 018814          285 NYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAY  344 (350)
Q Consensus       285 ~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~  344 (350)
                      --..+....++++.++++.-.++..++.++|.+.|++ +++++.|+|.++++.|.++|+-
T Consensus       256 ikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~N-pft~~h~lGa~lVF~Gt~~fa~  314 (330)
T KOG1583|consen  256 IKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFEN-PFTPWHWLGAALVFFGTLLFAN  314 (330)
T ss_pred             HHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            5555677789999999999999999999999999988 9999999999999999999973

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.43  E-value=1.3e-13  Score=117.80  Aligned_cols=259  Identities=14%  Similarity=0.113  Sum_probs=188.2

Q ss_pred             HHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHHHHhhHHHHHHHHHHH
Q 018814           58 LVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVV  137 (350)
Q Consensus        58 ~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  137 (350)
                      ..+.+.++-.+ +.+.|..-++.....-.++-..+..+++.                 .-...|++.+.+++.-.-.+++
T Consensus        33 ~a~tss~la~k-~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~-----------------~~~~~~~hYilla~~DVEaNy~   94 (336)
T KOG2766|consen   33 TAFTSSELARK-GINAPTSQTFLNYVLLALVYGPIMLFRRK-----------------YIKAKWRHYILLAFVDVEANYF   94 (336)
T ss_pred             chhhhHHHHhc-cCCCccHHHHHHHHHHHHHHhhHHHhhhH-----------------HHHHHHHHhhheeEEeecccEE
Confidence            34455666554 45677766666555444443333333321                 1124577788888777777888


Q ss_pred             hhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccCc--------ccchhHHHHHHHH
Q 018814          138 SVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL--------SFDFFGYAVVFLA  209 (350)
Q Consensus       138 ~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~--------~~~~~G~~l~l~s  209 (350)
                      -..|.||++....+.+-+-..+.+++++++++|.|+++.++.|+.+++.|++++...|.        +...+|+++.+.+
T Consensus        95 vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~G  174 (336)
T KOG2766|consen   95 VVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAG  174 (336)
T ss_pred             EeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEec
Confidence            88999999999999999999999999999999999999999999999999999765542        2336899999999


Q ss_pred             HHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHHHHHHHHHH-
Q 018814          210 NITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSI-  288 (350)
Q Consensus       210 a~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-  288 (350)
                      |-+||..++..+.+.|  +.+..+++....+++.+...+-.+..  -.+....  .++......+ . ..++.+.-|+. 
T Consensus       175 ATlYaVSNv~EEflvk--n~d~~elm~~lgLfGaIIsaIQ~i~~--~~~~~tl--~w~~~i~~yl-~-f~L~MFllYsl~  246 (336)
T KOG2766|consen  175 ATLYAVSNVSEEFLVK--NADRVELMGFLGLFGAIISAIQFIFE--RHHVSTL--HWDSAIFLYL-R-FALTMFLLYSLA  246 (336)
T ss_pred             ceeeeeccccHHHHHh--cCcHHHHHHHHHHHHHHHHHHHHhhh--ccceeeE--eehHHHHHHH-H-HHHHHHHHHHhh
Confidence            9999999999999988  67889999888888888877653322  1111111  1222221111 1 22233333333 


Q ss_pred             HHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhh
Q 018814          289 FLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYY  345 (350)
Q Consensus       289 ~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~  345 (350)
                      -..+|..+++.+++.-......+.++  -.||- +.+|...+.++.+..|.++|.-+
T Consensus       247 pil~k~~~aT~~nlslLTsDmwsl~i--~~FgY-hv~wLY~laF~~i~~GliiYs~r  300 (336)
T KOG2766|consen  247 PILIKTNSATMFNLSLLTSDMWSLLI--RTFGY-HVDWLYFLAFATIATGLIIYSTR  300 (336)
T ss_pred             HHheecCCceEEEhhHhHHHHHHHHH--HHHhc-chhhhhHHHHHHHHHhhEEeecc
Confidence            36788899998888777778888777  67888 99999999999999999999643

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.35  E-value=1.2e-11  Score=94.80  Aligned_cols=135  Identities=12%  Similarity=0.077  Sum_probs=117.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHHH
Q 018814          202 GYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILA  281 (350)
Q Consensus       202 G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  281 (350)
                      ..+++++|++++++..++.|--.+  +.||..-+..-++....++..+...+|.+...    ...+...|..+..+|+.+
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~--~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~----~~~~~k~~lflilSGla~   77 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLE--GVDPDFATTIRTIVILIFLLIVLLVTGNWQAG----GEIGPKSWLFLILSGLAG   77 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcc--ccCccHHHHHHHHHHHHHHHHHHHhcCceecc----cccCcceehhhhHHHHHH
Confidence            468999999999999999888777  67888888888888888888888888875432    234566688999999888


Q ss_pred             HHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhh
Q 018814          282 FFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYA  343 (350)
Q Consensus       282 ~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~  343 (350)
                      -...++.|++++...+..+...+-..+++++++|++++|| ++|..+++|++++..|..+.+
T Consensus        78 glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E-~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          78 GLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGE-RLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcC-CCCHHHHHHHHHHHhCeeeEe
Confidence            8888888999999999999999999999999999999999 999999999999999987764

>TIGR00803 nst UDP-galactose transporter

Probab=99.26  E-value=4.3e-11  Score=105.10  Aligned_cols=192  Identities=16%  Similarity=0.122  Sum_probs=123.6

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeecc--------------------C-------cc
Q 018814          145 VNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR--------------------D-------LS  197 (350)
Q Consensus       145 ~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~--------------------~-------~~  197 (350)
                      ++++.....++..++++++......+||++..++++..+...|+......                    +       .+
T Consensus         2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g   81 (222)
T TIGR00803         2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG   81 (222)
T ss_pred             ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence            45677778888888888888888888888888888888888887642111                    1       01


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCC--CccchhHHHHHH
Q 018814          198 FDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFP--YLLSPGFLVVLC  275 (350)
Q Consensus       198 ~~~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~  275 (350)
                      ....|....+.+..+.++..++.++..++.+.+.+.........+.+....... ..+.....+.+  ..++...|..++
T Consensus        82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  160 (222)
T TIGR00803        82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLL-WSDGTLISNFGFFIGYPTAVWIVGL  160 (222)
T ss_pred             cHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHh-hcccchhhccCcccCCchHHHHHHH
Confidence            235677777778888888888988887643322222222222222222111111 11111111111  112233333333


Q ss_pred             HHHHHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHh
Q 018814          276 FSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLY  342 (350)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~  342 (350)
                      .    ....+.+..+.+|+.++.+.++...++++++.++|+++||| +++..++.|..+++.|+++|
T Consensus       161 ~----~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~-~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       161 L----NVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDA-KISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             H----HHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcC-CccHHHHHHHHHHHeeeEeC
Confidence            3    33333445578899999999999999999999999999999 99999999999999998765

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=99.25  E-value=2.7e-11  Score=99.79  Aligned_cols=220  Identities=15%  Similarity=0.121  Sum_probs=158.1

Q ss_pred             HHHHhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccC--ccc
Q 018814          121 LMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARD--LSF  198 (350)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~--~~~  198 (350)
                      +++..|.++++.+.++.+..+++.++++.++.+..+.-.|+.+++++++++|+...++.+.++++.|++++...|  ...
T Consensus        53 ~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a~  132 (290)
T KOG4314|consen   53 FIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHAD  132 (290)
T ss_pred             eeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhhh
Confidence            445678888999999999999999999999999999999999999999999999999999999999999987554  345


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHH---H-HHHHH--HHHHhccchhhhcCCCccchhHHH
Q 018814          199 DFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVIC---G-PLLLL--WTFLRGDLETTINFPYLLSPGFLV  272 (350)
Q Consensus       199 ~~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~---~-~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~  272 (350)
                      ++.|+..++.|+...|+|-+..|+...+.+.....  -++...+   . ....|  ...+++ .++...+..    .-|.
T Consensus       133 e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa--~FmS~LGF~NL~~~~~~~lIL~~T~-VE~~qsFA~----~PWG  205 (290)
T KOG4314|consen  133 EIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAA--HFMSCLGFFNLCFISFPALILAFTG-VEHLQSFAA----APWG  205 (290)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHH--HHHHHHHHHHHHHHhhhHHHHHHhc-hHHHHHHhh----CCch
Confidence            78999999999999999999999998754443322  1111111   1 11111  112222 111111211    1245


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhheec
Q 018814          273 VLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYKLV  348 (350)
Q Consensus       273 ~l~~~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~~~  348 (350)
                      .++..+.+...+|+.....+..+.|...|+=........... .+++.|...+...+.|..++.+|.++....+.+
T Consensus       206 ~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~Naai-DiL~q~l~~ntl~La~T~iI~i~FiLiiiP~d~  280 (290)
T KOG4314|consen  206 CLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAI-DILFQELEFNTLFLAATCIICIGFILIIIPEDK  280 (290)
T ss_pred             hhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHH-HHHHHHHHHHHHHHHHHHHHHHhHHheecccch
Confidence            666666677777777777777777877766333333333333 456777688999999999999999887654433

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.14  E-value=2e-10  Score=90.90  Aligned_cols=120  Identities=15%  Similarity=0.183  Sum_probs=95.8

Q ss_pred             HHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHHHHhhHHHH-HHHH
Q 018814           56 VLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVA-YLLY  134 (350)
Q Consensus        56 ~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  134 (350)
                      .....++|...++.   +|...+++|+..+.+ +.........+.            ....+.+++......+.+ ....
T Consensus         4 a~~~~~~k~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~   67 (126)
T PF00892_consen    4 AIYSVFSKKLLKKI---SPLSITFWRFLIAGI-LLILLLILGRKP------------FKNLSPRQWLWLLFLGLLGTALA   67 (126)
T ss_pred             eeHHHHHHHHhccC---CHHHHHHHHHHHHHH-HHHHHHhhcccc------------ccCCChhhhhhhhHhhccceehH
Confidence            34455779999875   788899999999987 444433222210            112445666777777754 6889


Q ss_pred             HHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceee
Q 018814          135 MVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVA  191 (350)
Q Consensus       135 ~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~  191 (350)
                      ..+++.++++++++..+.+.++.|+++.+++++++||+++++++.|+++++.|+.+.
T Consensus        68 ~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~  124 (126)
T PF00892_consen   68 YLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI  124 (126)
T ss_pred             HHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999998763

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.13  E-value=5.6e-10  Score=88.34  Aligned_cols=124  Identities=23%  Similarity=0.321  Sum_probs=97.8

Q ss_pred             HHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHHH-HHHHHHHH
Q 018814          211 ITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILA-FFLNYSIF  289 (350)
Q Consensus       211 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~  289 (350)
                      ++||.+.+..|+..+  +.++.+..++....+.+ +.+.....+...     ....+...+......++++ ...+...+
T Consensus         1 ~~~a~~~~~~k~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLK--KISPLSITFWRFLIAGI-LLILLLILGRKP-----FKNLSPRQWLWLLFLGLLGTALAYLLYF   72 (126)
T ss_pred             ceeeeHHHHHHHHhc--cCCHHHHHHHHHHHHHH-HHHHHHhhcccc-----ccCCChhhhhhhhHhhccceehHHHHHH
Confidence            367889999999988  58999999999999987 655555443321     1122333445566666665 44555557


Q ss_pred             HHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhh
Q 018814          290 LNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYA  343 (350)
Q Consensus       290 ~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~  343 (350)
                      +++++.++...++..+++|+++.++++++++| ++++.+++|++++++|+.+..
T Consensus        73 ~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e-~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   73 YALKYISASIVSILQYLSPVFAAILGWLFLGE-RPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHHhcchhHHHHHHHHHHHHHHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999 999999999999999998764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.08  E-value=1.4e-09  Score=83.58  Aligned_cols=132  Identities=17%  Similarity=0.174  Sum_probs=104.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHHHHhh
Q 018814           47 AAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLP  126 (350)
Q Consensus        47 ~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (350)
                      .+++-..+.....+..|..++..   .|.+-+..|.++....+.......+....           ...++.|.|..+..
T Consensus         7 ~ALLsA~fa~L~~iF~KIGl~~v---dp~~At~IRtiVi~~~l~~v~~~~g~~~~-----------~~~~~~k~~lflil   72 (140)
T COG2510           7 YALLSALFAGLTPIFAKIGLEGV---DPDFATTIRTIVILIFLLIVLLVTGNWQA-----------GGEIGPKSWLFLIL   72 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccc---CccHHHHHHHHHHHHHHHHHHHhcCceec-----------ccccCcceehhhhH
Confidence            33444444445556889999977   67888999999888777665553322111           11145567777777


Q ss_pred             HHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeee
Q 018814          127 LAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAG  192 (350)
Q Consensus       127 ~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~  192 (350)
                      -|+.-.+++.++|.|++.-++|-..-+-.++|+++.+++++++|||++.++|+|++++.+|+.+..
T Consensus        73 SGla~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          73 SGLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            778889999999999999999999999999999999999999999999999999999999998864

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.01  E-value=6.9e-10  Score=86.70  Aligned_cols=108  Identities=11%  Similarity=0.117  Sum_probs=80.7

Q ss_pred             HHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHHHHhhHHHHH-HHHHHHhhhhhcccchhHHHHHHHHH
Q 018814           79 LLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAY-LLYMVVSVESVRGVNVPMYTTLRRTT  157 (350)
Q Consensus        79 ~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~al~~~~~s~~~~l~~~~  157 (350)
                      .+|+.++.+++......+++ .++.         .+...++.+......|+.. ..+..+++.|+++.+ +....+.+++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~-~~~~---------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~   70 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGR-LRDL---------FRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLS   70 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHcc-HHHH---------HHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHH
Confidence            46788887777665443221 1100         1112224445556666544 488899999999999 6888999999


Q ss_pred             HHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccCcc
Q 018814          158 VAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLS  197 (350)
Q Consensus       158 p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~  197 (350)
                      |+++++++++++|||++++++.+++++++|++++..+|.+
T Consensus        71 pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   71 PIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            9999999999999999999999999999999998776654

>TIGR00688 rarD rarD protein

Probab=98.92  E-value=5.6e-08  Score=87.24  Aligned_cols=139  Identities=14%  Similarity=0.105  Sum_probs=108.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhh-hcCCCccchhHHHHHHHHHH
Q 018814          201 FGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETT-INFPYLLSPGFLVVLCFSCI  279 (350)
Q Consensus       201 ~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~  279 (350)
                      .|..+.++++++|+...+..|. ..  +.++.++.++...++.+++.++....++.... .+.........+..+...|+
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~--~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   78 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LK--PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL   78 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hc--cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH
Confidence            5889999999999999999987 44  58999999999999988877765444432111 01111111222345666666


Q ss_pred             HHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhh
Q 018814          280 LAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYA  343 (350)
Q Consensus       280 ~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~  343 (350)
                      +......+.+.+++++++...++..+..|++++++++++++| +++..+++|.++.++|+.+..
T Consensus        79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~E-k~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKE-RISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHH
Confidence            655566666799999999999999999999999999999999 999999999999999988654

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.89  E-value=9.7e-08  Score=87.61  Aligned_cols=139  Identities=13%  Similarity=0.069  Sum_probs=105.5

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHH
Q 018814          199 DFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSC  278 (350)
Q Consensus       199 ~~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  278 (350)
                      ...|.++.++++++|+...+..|.. .  +++|.++.++...++.+++.+.....++.......  ..+...+......+
T Consensus         6 ~~~g~~~~l~a~~~wg~~~~~~k~~-~--~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~   80 (296)
T PRK15430          6 TRQGVLLALAAYFIWGIAPAYFKLI-Y--YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTL--IQTPQKIFMLAVSA   80 (296)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHh-c--CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHH--HcCHHHHHHHHHHH
Confidence            3589999999999999999999764 4  58999999999999988777665544332211100  01222222223333


Q ss_pred             HHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhh
Q 018814          279 ILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYA  343 (350)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~  343 (350)
                      +.....+.+.+++++++++...++..+..|++..++++++++| +++..+++|.++.+.|+.+..
T Consensus        81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E-~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGE-RFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHHHHHH
Confidence            3333445555799999999999999999999999999999999 999999999999999998764

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.82  E-value=5.9e-07  Score=79.68  Aligned_cols=209  Identities=11%  Similarity=0.077  Sum_probs=150.7

Q ss_pred             HHHHHHhhHHHHHHHHHHHhhhhhcccchhHHHHH-HHHHHHHHHHHHHHHhccccCcchh----hhHHHhhhhceeeec
Q 018814          119 KTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTL-RRTTVAFTMIMEYFLAGQKYTPPVV----GSVGLIILGAFVAGA  193 (350)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l-~~~~p~~~~l~~~~~~~e~~~~~~~----~~~~l~~~Gv~l~~~  193 (350)
                      +.+...+..|+++...+..++.+.++..+|.+--+ ...+.+.+.+.+.++++|--+..++    .++++.++|+.+.+.
T Consensus        43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~  122 (269)
T PF06800_consen   43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY  122 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence            56666677779999999999999999999965544 4788899999999999998886665    488889999998654


Q ss_pred             cCcc--------cchhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCc
Q 018814          194 RDLS--------FDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYL  265 (350)
Q Consensus       194 ~~~~--------~~~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  265 (350)
                      .|.+        ....|....+++.+.|..|.+..|-.    +.++++...=+++--.+....+.....+  ...     
T Consensus       123 ~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~----~~~~~~~~lPqaiGm~i~a~i~~~~~~~--~~~-----  191 (269)
T PF06800_consen  123 QDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAF----HVSGWSAFLPQAIGMLIGAFIFNLFSKK--PFF-----  191 (269)
T ss_pred             ccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhc----CCChhHhHHHHHHHHHHHHHHHhhcccc--ccc-----
Confidence            4321        22579999999999999999987663    4678887766644333322233222211  011     


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchh----hHHHHHHHHHHHHH
Q 018814          266 LSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFL----NVFGQLLGFLGSGL  341 (350)
Q Consensus       266 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~----~~~G~~li~~g~~~  341 (350)
                       +... +.=+..|++=-..|.+.+.+.++.+..+.=.++-+..+.+++.|.+++|| +-+..    .++|.+++++|.++
T Consensus       192 -~k~~-~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E-~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  192 -EKKS-WKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKE-KKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             -ccch-HHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEe-cCchhhHHHHHHHHHHHHHhhhc
Confidence             1111 23345555555566666777888888888888999999999999999999 65644    56788888888754

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.82  E-value=1.9e-07  Score=84.98  Aligned_cols=133  Identities=13%  Similarity=0.120  Sum_probs=99.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHHHH
Q 018814          203 YAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAF  282 (350)
Q Consensus       203 ~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  282 (350)
                      ..+.+.+++++|...+.+|+..++  .++.  ..+....+.+.+.|+.......   .... ..+...+..+...++...
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~--~~~~--~~~~~~~~~~~l~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~   74 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADK--EPDF--LWWALLAHSVLLTPYGLWYLAQ---VGWS-RLPATFWLLLAISAVANM   74 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCc--hhHH--HHHHHHHHHHHHHHHHHHhccc---CCCC-CcchhhHHHHHHHHHHHH
Confidence            578899999999999999988763  2333  4555566666666655432100   0111 112233445556666666


Q ss_pred             HHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhh
Q 018814          283 FLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAY  344 (350)
Q Consensus       283 ~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~  344 (350)
                      ....+.+++.++.++...++..+..|+++.+++++++|| +++..+++|.++++.|+.+...
T Consensus        75 ~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e-~~~~~~~~g~~~~~~Gv~ll~~  135 (281)
T TIGR03340        75 VYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGE-TLSPLAWLGILIITLGLLVLGL  135 (281)
T ss_pred             HHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHhc
Confidence            667777899999999999999999999999999999999 9999999999999999987654

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.77  E-value=2.9e-07  Score=82.67  Aligned_cols=133  Identities=12%  Similarity=0.007  Sum_probs=99.9

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHH
Q 018814           42 RRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTL  121 (350)
Q Consensus        42 ~~~~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (350)
                      .++...+++-.++.....++.|...++.+. .+..+..+|+.++.+++.+.......+.              ..+.+++
T Consensus       127 ~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~--------------~~~~~~~  191 (260)
T TIGR00950       127 PAGLLLGLGSGISFALGTVLYKRLVKKEGP-ELLQFTGWVLLLGALLLLPFAWFLGPNP--------------QALSLQW  191 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHhhcCCc-hHHHHHHHHHHHHHHHHHHHHHhcCCCC--------------CcchHHH
Confidence            345666666666667777788998876521 1344555788888887766655322110              0234566


Q ss_pred             HHHhhHHH-HHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhce
Q 018814          122 MHTLPLAV-AYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAF  189 (350)
Q Consensus       122 ~~~~~~~~-~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~  189 (350)
                      ...+..++ .......+++.++++.+++.++.+.++.|++++++++++++|+++..++.|..+++.|+.
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~  260 (260)
T TIGR00950       192 GALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence            65666664 456788899999999999999999999999999999999999999999999999999863

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.66  E-value=5.7e-07  Score=82.16  Aligned_cols=212  Identities=15%  Similarity=0.118  Sum_probs=124.4

Q ss_pred             HHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeee-ccC---cccch----
Q 018814          129 VAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAG-ARD---LSFDF----  200 (350)
Q Consensus       129 ~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~-~~~---~~~~~----  200 (350)
                      +.+.++..+.+.|+.+.|.+..+-+..+..++.++++..++|||++++++.|+.++++|..++. ..+   ...+.    
T Consensus        58 ~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~~~l~  137 (300)
T PF05653_consen   58 LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHTLDELI  137 (300)
T ss_pred             HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCCHHHHH
Confidence            5567778899999999999999999999999999999999999999999999999999998742 211   11110    


Q ss_pred             -----hHHH-HH-HHHHHHHHHHHHHHHHhhccCCCChhhHHHHHH---HHHHHHHHH---HH-HHhccchhhhcCCCcc
Q 018814          201 -----FGYA-VV-FLANITTAIYLATIARIGKSSGLNSFGLMWCNG---VICGPLLLL---WT-FLRGDLETTINFPYLL  266 (350)
Q Consensus       201 -----~G~~-l~-l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~---~~-~~~~~~~~~~~~~~~~  266 (350)
                           .+++ +. +...+...+.....+|..+      ..+..|..   .++..-.+.   .. .+.....   ..+...
T Consensus       138 ~~~~~~~fl~y~~~~~~~~~~L~~~~~~r~g~------~~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~---g~~~f~  208 (300)
T PF05653_consen  138 ALLSQPGFLVYFILVLVLILILIFFIKPRYGR------RNILVYISICSLIGSFTVLSAKAISILIKLTFS---GDNQFT  208 (300)
T ss_pred             HHhcCcceehhHHHHHHHHHHHHHhhcchhcc------cceEEEEEEeccccchhhhHHHHHHHHHHHHhc---Cchhhh
Confidence                 1111 11 1111111111111112111      11122211   111111000   00 1000000   111123


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhh-HHHHHHHHHHHHhCCC-Ccch----hhHHHHHHHHHHHH
Q 018814          267 SPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNL-KDLFTIGLGWILFGGL-PFDF----LNVFGQLLGFLGSG  340 (350)
Q Consensus       267 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~-~~v~~~~ls~~~~~e~-~~t~----~~~~G~~li~~g~~  340 (350)
                      .+..|..++....+....-+..++++++.+++.+....+. -...+++-|.++|+|. .++.    ....|+.+++.|++
T Consensus       209 ~~~~y~l~~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~  288 (300)
T PF05653_consen  209 YPLTYLLLLVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVF  288 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhh
Confidence            3445556555555666666677899998888665544443 3455667778888873 3555    34568888999999


Q ss_pred             HhhhheecC
Q 018814          341 LYAYYKLVG  349 (350)
Q Consensus       341 ~~~~~~~~~  349 (350)
                      +.+..|..+
T Consensus       289 lL~~~~~~~  297 (300)
T PF05653_consen  289 LLSSSKDKE  297 (300)
T ss_pred             eeeccCchh
Confidence            987666543

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.55  E-value=4.1e-06  Score=78.58  Aligned_cols=138  Identities=15%  Similarity=0.205  Sum_probs=108.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHH
Q 018814          201 FGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCIL  280 (350)
Q Consensus       201 ~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  280 (350)
                      .-....+..-++|+.+.++.|...+ .++++....+|-..+++++++++....+..   ...+ ..+...+..+...|++
T Consensus        13 ~~~~~~~~~q~~~~~~~~~~k~a~~-~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~---~~~~-~~~~~~~~~l~l~g~~   87 (358)
T PLN00411         13 VFLTAMLATETSVVGISTLFKVATS-KGLNIYPFLGYSYLLASLLLLPSLFFTNRS---RSLP-PLSVSILSKIGLLGFL   87 (358)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHH-CCCCccHHHHHHHHHHHHHHHHHHHHHHHh---cccC-cchHHHHHHHHHHHHH
Confidence            4556778888999999999999885 489999999999999998888876543210   0011 1123344566667777


Q ss_pred             HHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHH------hCCCCcchhhHHHHHHHHHHHHHhhh
Q 018814          281 AFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWIL------FGGLPFDFLNVFGQLLGFLGSGLYAY  344 (350)
Q Consensus       281 ~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~------~~e~~~t~~~~~G~~li~~g~~~~~~  344 (350)
                      +...+...+..+++++|...+++.+..|+++.++++++      ++| +++..+++|.++.+.|+.+...
T Consensus        88 g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~e-r~~~~~~~G~~l~~~Gv~ll~~  156 (358)
T PLN00411         88 GSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKE-RSSVAKVMGTILSLIGALVVIF  156 (358)
T ss_pred             HHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcc-cccHHHHHHHHHHHHHHHHHHH
Confidence            74444456789999999999999999999999999999      699 9999999999999999987553

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.45  E-value=9.8e-06  Score=64.41  Aligned_cols=124  Identities=11%  Similarity=0.050  Sum_probs=87.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHH
Q 018814          201 FGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCIL  280 (350)
Q Consensus       201 ~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  280 (350)
                      .|+++.+.+.++.+..++..|+=.++.+  ..+.... . .....    ..              .++   ...+..|+.
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g--~~~~~~~-~-~~~~~----~~--------------~~p---~~~i~lgl~   56 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLP--LLSHAWD-F-IAALL----AF--------------GLA---LRAVLLGLA   56 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCC--CccchhH-H-HHHHH----HH--------------hcc---HHHHHHHHH
Confidence            4788999999999999999998776432  2221111 0 00000    00              000   124556666


Q ss_pred             HHHHHHHH-HHHhhccchhHHHHhhhhHHHHHHHHHHH--HhCCCCcchhhHHHHHHHHHHHHHhhhheecCC
Q 018814          281 AFFLNYSI-FLNTTLNSAVTQTICGNLKDLFTIGLGWI--LFGGLPFDFLNVFGQLLGFLGSGLYAYYKLVGK  350 (350)
Q Consensus       281 ~~~~~~~~-~~~~~~~~a~~~sv~~~~~~v~~~~ls~~--~~~e~~~t~~~~~G~~li~~g~~~~~~~~~~~~  350 (350)
                      ++..++.. ..++++.+...+.......++...+.++.  +||| ++|+.+++|.+++++|+++.++.++++|
T Consensus        57 ~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E-~ls~~~~iGi~lIi~GV~lv~~~~~~~~  128 (129)
T PRK02971         57 GYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNE-TFSLKKTLGVACIMLGVWLINLPTTKAR  128 (129)
T ss_pred             HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHhccCCCCCC
Confidence            66666655 58889999999888888887777777774  8999 9999999999999999999987666553

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.40  E-value=1.1e-05  Score=71.30  Aligned_cols=141  Identities=16%  Similarity=0.174  Sum_probs=114.1

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHH
Q 018814          198 FDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFS  277 (350)
Q Consensus       198 ~~~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  277 (350)
                      .+..|+++++.+-+.|++.-.+.|-+.   +.++.++..+-.+.+.+++.........+.+..+  ...++..+..+...
T Consensus         4 ~~~~Gil~~l~Ay~lwG~lp~y~kll~---~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~--~~~~p~~~~~~~l~   78 (293)
T COG2962           4 DSRKGILLALLAYLLWGLLPLYFKLLE---PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQ--LLKQPKTLLMLALT   78 (293)
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH--HHhCcHHHHHHHHH
Confidence            345899999999999999999987765   5789999999999999999887777776665544  23345455555555


Q ss_pred             HHHHHHHHHHHH-HHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhh
Q 018814          278 CILAFFLNYSIF-LNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYY  345 (350)
Q Consensus       278 ~~~~~~~~~~~~-~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~  345 (350)
                      ++. ...|...| +++.+......|.=.++.|++.+++|.++++| .++..|++..++..+|+..-.+.
T Consensus        79 a~l-i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkE-rls~~Q~iAV~lA~~GV~~~~~~  145 (293)
T COG2962          79 ALL-IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKE-RLSRLQWIAVGLAAAGVLIQTWL  145 (293)
T ss_pred             HHH-HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHH
Confidence            543 44555554 89999999999999999999999999999999 99999999999999999876654

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.36  E-value=1.1e-05  Score=73.87  Aligned_cols=132  Identities=14%  Similarity=0.133  Sum_probs=92.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHH
Q 018814           43 RGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLM  122 (350)
Q Consensus        43 ~~~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (350)
                      .+.+.++.-.++....+++.|...++.   .|.... ++..++.+++.+........              ...+...+.
T Consensus       148 ~G~ll~l~aa~~~a~~~v~~r~~~~~~---~~~~~~-~~~~~~~~~l~~~~~~~~~~--------------~~~~~~~~~  209 (293)
T PRK10532        148 TGAALALGAGACWAIYILSGQRAGAEH---GPATVA-IGSLIAALIFVPIGALQAGE--------------ALWHWSILP  209 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhccC---CchHHH-HHHHHHHHHHHHHHHHccCc--------------ccCCHHHHH
Confidence            355566666666666677778876654   455444 44455554444433321110              002233343


Q ss_pred             HHhhHH-HHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeee
Q 018814          123 HTLPLA-VAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAG  192 (350)
Q Consensus       123 ~~~~~~-~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~  192 (350)
                      ..+..+ ++..+...+++.++++++++.++.+..++|++..++++++++|+++..+++|..++++|+....
T Consensus       210 ~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~  280 (293)
T PRK10532        210 LGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGST  280 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence            344556 4456677799999999999999999999999999999999999999999999999999998753

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.30  E-value=2.2e-05  Score=64.39  Aligned_cols=143  Identities=13%  Similarity=0.060  Sum_probs=99.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhc-----CCCCchHHHHHHHHHHHHHHHHHHHHc-cccccccCCCCccCCCCCCccchH
Q 018814           46 NAAISYMACAVLLVMFNKAALSS-----YNFPCANVITLLQMISSCSFLYFLRRW-KIINFTMGDSLMTSDSSSTFVPLK  119 (350)
Q Consensus        46 ~~~l~~~~~~~~~~~~~K~~l~~-----~~f~~p~~l~~~r~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  119 (350)
                      ..++...++...-.++.|..+++     .+. .+..+.......+.+++.+.... +..+..+.....  ...+...+.+
T Consensus         3 ~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~-~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~--~~~~~~~~~~   79 (153)
T PF03151_consen    3 ILALASSLFSALRNVLIKKLLKKVSSNSKKL-NPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEI--FGEELSSDPN   79 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccccccCC-CHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHh--hhhhhcchHH
Confidence            34455556666666777888876     344 46667666666666666554332 222211100000  0000001234


Q ss_pred             HHHHHhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceee
Q 018814          120 TLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVA  191 (350)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~  191 (350)
                      .+...+..|+...+.++..+..++++++-+++++.+...+.+.+++.++++|+++..++.|+.+.++|+.+.
T Consensus        80 ~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Y  151 (153)
T PF03151_consen   80 FIFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLY  151 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhee
Confidence            455566666888889999999999999999999999999999999999999999999999999999999764

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.29  E-value=4.8e-05  Score=71.43  Aligned_cols=138  Identities=11%  Similarity=0.091  Sum_probs=105.0

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhccCCCC-hhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCcc-chhHHHHHHH
Q 018814          199 DFFGYAVVFLANITTAIYLATIARIGKSSGLN-SFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLL-SPGFLVVLCF  276 (350)
Q Consensus       199 ~~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~  276 (350)
                      +..-..+.+..=.+...+.++.|.+.+  ..+ |+.+..++..++.+++...... + ...   .+... ....+..++.
T Consensus        47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~--~~~~P~~l~~~~~~~~~l~~~~~~~~-~-~~~---~~~~~~~~~~~~~llp  119 (350)
T PTZ00343         47 KWKLALLFLTWYALNVLYVVDNKLALN--MLPLPWTISSLQLFVGWLFALLYWAT-G-FRK---IPRIKSLKLFLKNFLP  119 (350)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHH--hCChhHHHHHHHHHHHHHHHHHHHHh-C-CCC---CCCCCCHHHHHHHHHH
Confidence            344555666666666777888999987  456 9999999999987766544321 1 111   11111 1234567778


Q ss_pred             HHHHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhh
Q 018814          277 SCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAY  344 (350)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~  344 (350)
                      .|++++......+.+++.+++..+++.....|++++++++++++| +++..++.|.+++++|+.+...
T Consensus       120 ~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~e-k~s~~~~l~l~l~v~Gv~l~~~  186 (350)
T PTZ00343        120 QGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQ-FLNLYAYLSLIPIVGGVALASV  186 (350)
T ss_pred             HHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCC-CccHHHHHHHHHHHHHHHheec
Confidence            888887776666788999999999999999999999999999999 9999999999999999988653

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.27  E-value=2.5e-05  Score=71.72  Aligned_cols=144  Identities=14%  Similarity=0.034  Sum_probs=96.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHH
Q 018814           43 RGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLM  122 (350)
Q Consensus        43 ~~~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (350)
                      .+.+.++.-.+++...+++.|...++.+-+.......++.+.+.+.................+       ....+.+.+.
T Consensus       143 ~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~  215 (299)
T PRK11453        143 LGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHS-------LVTIDMTTIL  215 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhh-------hccCCHHHHH
Confidence            455566666666666666778765543212233445555555544333322211100000000       0113456677


Q ss_pred             HHhhHH-HHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeec
Q 018814          123 HTLPLA-VAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGA  193 (350)
Q Consensus       123 ~~~~~~-~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~  193 (350)
                      .++..+ +.......+++.++++.+++.++.+..+.|++..++++++++|+++..+++|..++++|+.+...
T Consensus       216 ~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~  287 (299)
T PRK11453        216 SLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVF  287 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhc
Confidence            777777 55566778999999999999999999999999999999999999999999999999999987543

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.22  E-value=2.3e-05  Score=71.90  Aligned_cols=131  Identities=9%  Similarity=-0.005  Sum_probs=90.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHHH
Q 018814           44 GANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMH  123 (350)
Q Consensus        44 ~~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (350)
                      +.+.+++-.+++...++++|..-+++   .+....  ... +.+.+.+.......  +           ....+.+.+..
T Consensus       157 G~~~~l~aa~~~A~~~v~~k~~~~~~---~~~~~~--~~~-~~~~l~~~~~~~~~--~-----------~~~~~~~~~~~  217 (295)
T PRK11689        157 SYGLAFIGAFIWAAYCNVTRKYARGK---NGITLF--FIL-TALALWIKYFLSPQ--P-----------AMVFSLPAIIK  217 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccCCC---CchhHH--HHH-HHHHHHHHHHHhcC--c-----------cccCCHHHHHH
Confidence            45555566666666666778876544   344332  222 22222222221110  0           01134455665


Q ss_pred             HhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeec
Q 018814          124 TLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGA  193 (350)
Q Consensus       124 ~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~  193 (350)
                      .+..++......++++.++++.+++..+.+.++.|++..++++++++|+++..++.|.++++.|+.+...
T Consensus       218 l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        218 LLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence            6666666677788999999999999999999999999999999999999999999999999999977543

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.18  E-value=0.00011  Score=67.21  Aligned_cols=129  Identities=18%  Similarity=0.128  Sum_probs=97.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHHHHH
Q 018814          204 AVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFF  283 (350)
Q Consensus       204 ~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  283 (350)
                      +..+.-.+.|+...+..|...+  +.+|.+...+-..+++++++++....+..     .   .+...+......|.+...
T Consensus        11 ~~~~~~~~iWg~~~~~~K~~~~--~~~p~~~~~~R~~~a~l~ll~~~~~~~~~-----~---~~~~~~~~~~~~g~~~~~   80 (292)
T PRK11272         11 GALFALYIIWGSTYLVIRIGVE--SWPPLMMAGVRFLIAGILLLAFLLLRGHP-----L---PTLRQWLNAALIGLLLLA   80 (292)
T ss_pred             HHHHHHHHHHhhHHHHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHHHHhCCC-----C---CcHHHHHHHHHHHHHHHH
Confidence            4456778899999999998776  78999999999999988887765533211     1   112234444555655433


Q ss_pred             -HHHHHHHHh-hccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhh
Q 018814          284 -LNYSIFLNT-TLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAY  344 (350)
Q Consensus       284 -~~~~~~~~~-~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~  344 (350)
                       .+...+.+. ++.++...++..+..|+++.+++++ ++| +++..+++|.++.++|+.+...
T Consensus        81 ~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e-~~~~~~~~~~~la~~Gv~ll~~  141 (292)
T PRK11272         81 VGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGI-RTRKLEWLGIAIGLAGIVLLNS  141 (292)
T ss_pred             HHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcc-cCchhHHHHHHHHHHhHHHHhc
Confidence             333445666 8889999999999999999999985 799 9999999999999999987753

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.17  E-value=4.9e-05  Score=59.16  Aligned_cols=105  Identities=21%  Similarity=0.257  Sum_probs=72.4

Q ss_pred             HHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHHHH-HHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHH
Q 018814          238 NGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAF-FLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGW  316 (350)
Q Consensus       238 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~  316 (350)
                      ...++.+.+..+....++..+.....  .+ .-+..++..|+++. ..+...+.+.++.++ .+++...+.|+++.++|+
T Consensus         4 r~~~~~l~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~   79 (113)
T PF13536_consen    4 RYLFSVLFLLIILLIRGRLRDLFRAL--RR-KPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSW   79 (113)
T ss_pred             HHHHHHHHHHHHHHHHccHHHHHHHH--Hh-CcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHH
Confidence            34455666665555544433221111  11 11234555566665 334444688898885 777889999999999999


Q ss_pred             HHhCCCCcchhhHHHHHHHHHHHHHhhhhee
Q 018814          317 ILFGGLPFDFLNVFGQLLGFLGSGLYAYYKL  347 (350)
Q Consensus       317 ~~~~e~~~t~~~~~G~~li~~g~~~~~~~~~  347 (350)
                      ++++| +++..++.|.+++++|+.+..+...
T Consensus        80 ~~~~e-r~~~~~~~a~~l~~~Gv~li~~~~~  109 (113)
T PF13536_consen   80 LFFKE-RLSPRRWLAILLILIGVILIAWSDL  109 (113)
T ss_pred             HHhcC-CCCHHHHHHHHHHHHHHHHHhhhhc
Confidence            99999 9999999999999999999877543

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.16  E-value=9.4e-06  Score=62.90  Aligned_cols=64  Identities=19%  Similarity=0.179  Sum_probs=59.8

Q ss_pred             HHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeee
Q 018814          129 VAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAG  192 (350)
Q Consensus       129 ~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~  192 (350)
                      .++....++...+++.+|++.+-.+-++.++++.+.+++++|||+++++++|+.++++|+.++.
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            5677888999999999999999999999999999999999999999999999999999998743

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.11  E-value=0.00015  Score=66.60  Aligned_cols=125  Identities=11%  Similarity=0.002  Sum_probs=91.0

Q ss_pred             HHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHH
Q 018814          211 ITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFL  290 (350)
Q Consensus       211 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  290 (350)
                      ++...++++.|...++. ..|..+..++..++.+...+... .+..    . ....+...+..++..|++........+.
T Consensus        12 ~~~~~~~~~NK~~l~~~-~~P~~~~~~~~~~~~~~~~~~~~-~~~~----~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~   84 (302)
T TIGR00817        12 FLNVYFNIYNKKLLNVF-PYPYFKTLISLAVGSLYCLLSWS-SGLP----K-RLKISSALLKLLLPVAIVHTIGHVTSNV   84 (302)
T ss_pred             HHHHHHHHHHHHHHhhC-ChhHHHHHHHHHHHHHHHHHHHH-hCCC----C-CCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34444556778888742 45888888888877666544311 1110    0 1112233456667777776555556679


Q ss_pred             HhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhh
Q 018814          291 NTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYA  343 (350)
Q Consensus       291 ~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~  343 (350)
                      +++++++...++.....|+++.++++++++| +++..++.|.+++++|+.+..
T Consensus        85 ~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e-~~~~~~~~~l~l~~~Gv~l~~  136 (302)
T TIGR00817        85 SLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQ-EFPSTLWLSLLPIVGGVALAS  136 (302)
T ss_pred             HHHhccHHHHHHHHhcchHHHHHHHHHHhCC-CCcHHHHHHHHHHHHHHhhhc
Confidence            9999999999999999999999999999999 999999999999999997654

specificities overlap.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=98.04  E-value=0.0044  Score=57.45  Aligned_cols=226  Identities=11%  Similarity=0.072  Sum_probs=135.2

Q ss_pred             chHHHHHHhhHHHHHHHHHHHhhhhhcccchhHHHHHH-HHHHHHHHHHHHHHhcccc---Cc----chhhhHHHhhhhc
Q 018814          117 PLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLR-RTTVAFTMIMEYFLAGQKY---TP----PVVGSVGLIILGA  188 (350)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~-~~~p~~~~l~~~~~~~e~~---~~----~~~~~~~l~~~Gv  188 (350)
                      +.+.+...+..|+++...+..+..+.++..+|...-+. .++.++..++..++++|-.   +.    .-..++++.++|+
T Consensus        69 ~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi  148 (345)
T PRK13499         69 SGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGV  148 (345)
T ss_pred             CHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHH
Confidence            34566667777899999999999999999999766544 7888888899888988643   32    2457888889999


Q ss_pred             eeeec----cCc---------ccchhHHHHHHHHHHHHHHHH-------HHHHHhhccCCCChhhHHHHHHH---HHHHH
Q 018814          189 FVAGA----RDL---------SFDFFGYAVVFLANITTAIYL-------ATIARIGKSSGLNSFGLMWCNGV---ICGPL  245 (350)
Q Consensus       189 ~l~~~----~~~---------~~~~~G~~l~l~sa~~~a~~~-------v~~~~~~~~~~~~~~~~~~~~~~---~~~~~  245 (350)
                      ++...    .|.         ....+|++++++|.+.++.|.       ...+... +.+.++.....-+..   ++...
T Consensus       149 ~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~-~~g~~~~~~~lp~~~~~~~G~~~  227 (345)
T PRK13499        149 AIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAA-ALGVDPLYAALPSYVVIMGGGAI  227 (345)
T ss_pred             HHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhh-hcCCCchHHHHHHHHHHHHHHHH
Confidence            88544    221         122589999999999999998       3333221 224455443333322   33332


Q ss_pred             HH-HHHHH---h-ccchhhhcCCCccc--hhHHHHHHHHHHHHHHHHHHHHHHhhccchhH----HHHhhhhHHHHHHHH
Q 018814          246 LL-LWTFL---R-GDLETTINFPYLLS--PGFLVVLCFSCILAFFLNYSIFLNTTLNSAVT----QTICGNLKDLFTIGL  314 (350)
Q Consensus       246 l~-~~~~~---~-~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~----~sv~~~~~~v~~~~l  314 (350)
                      .- .+...   . .++....+......  ..-.....+.|+.=...++......++.+...    ..+.....-+++.+.
T Consensus       228 ~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Viistlw  307 (345)
T PRK13499        228 TNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLW  307 (345)
T ss_pred             HHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHh
Confidence            22 22221   1 11110111110000  11123334444444444444445555553322    223335555888888


Q ss_pred             HHHHhCCCCcc------hhhHHHHHHHHHHHHHhhhh
Q 018814          315 GWILFGGLPFD------FLNVFGQLLGFLGSGLYAYY  345 (350)
Q Consensus       315 s~~~~~e~~~t------~~~~~G~~li~~g~~~~~~~  345 (350)
                      |. +++| .-+      ...++|.+++++|..+....
T Consensus       308 Gi-~lkE-~K~a~~k~~~~l~~G~vliI~g~~lig~~  342 (345)
T PRK13499        308 GL-VLKE-WKGASRRPVRVLSLGCVVIILAANIVGLG  342 (345)
T ss_pred             hh-hhhh-ccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence            87 5999 555      66789999999999887653

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=97.89  E-value=0.00015  Score=65.08  Aligned_cols=215  Identities=15%  Similarity=0.021  Sum_probs=128.7

Q ss_pred             H-HHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccCc---c-cc---
Q 018814          128 A-VAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL---S-FD---  199 (350)
Q Consensus       128 ~-~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~---~-~~---  199 (350)
                      | +.+.++-..+|.|..+-|.+..+-+.+++.+..++++..+++||+++...+|+.++++|..++.....   + .+   
T Consensus        70 G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~e  149 (335)
T KOG2922|consen   70 GMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEE  149 (335)
T ss_pred             HHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccccHHH
Confidence            5 67888889999999999999999999999999999999999999999999999999999988533211   1 01   


Q ss_pred             ------hhHHHHHHHH-HHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHH--hccc--hhhhcCCCccch
Q 018814          200 ------FFGYAVVFLA-NITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFL--RGDL--ETTINFPYLLSP  268 (350)
Q Consensus       200 ------~~G~~l~l~s-a~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~--~~~~~~~~~~~~  268 (350)
                            -.+++.=..- .....+-..+.+   +  +.....++.|..+.+.+..+-..-.  .|+.  ......+....+
T Consensus       150 l~~~~~~~~Fliy~~~iil~~~il~~~~~---p--~~g~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~~ql~~~  224 (335)
T KOG2922|consen  150 VWELATEPGFLVYVIIIILIVLILIFFYA---P--RYGQTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGNNQLFYP  224 (335)
T ss_pred             HHHHhcCccHHHHHHHHHHHHHHHheeec---c--cccccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCCcccccH
Confidence                  0121111111 111111111111   1  1222234444444443321100000  0000  001111222334


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhh-HHHHHHHHHHHHhCCC-Ccchh----hHHHHHHHHHHHHHh
Q 018814          269 GFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNL-KDLFTIGLGWILFGGL-PFDFL----NVFGQLLGFLGSGLY  342 (350)
Q Consensus       269 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~-~~v~~~~ls~~~~~e~-~~t~~----~~~G~~li~~g~~~~  342 (350)
                      ..|..++....+........+++.+..++..++...++ =+.++++.|.++|.|- ..+..    .+.|+..++.|+++.
T Consensus       225 ~ty~~~l~~~~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~flL  304 (335)
T KOG2922|consen  225 LTWIFLLVVATCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFLGIFLL  304 (335)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhheeeEe
Confidence            55666666666666666666788888777666555554 4566777888888763 23433    456888999999988


Q ss_pred             hhhee
Q 018814          343 AYYKL  347 (350)
Q Consensus       343 ~~~~~  347 (350)
                      +..|.
T Consensus       305 ~~~kd  309 (335)
T KOG2922|consen  305 HRTKD  309 (335)
T ss_pred             eeecc
Confidence            65544

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.78  E-value=0.00054  Score=62.62  Aligned_cols=132  Identities=12%  Similarity=0.068  Sum_probs=93.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHHH
Q 018814          202 GYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILA  281 (350)
Q Consensus       202 G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  281 (350)
                      |++++++++++|+..-+..|+..   +.++.+..  ...++..+...+.....+       +.......+..-+..|+.=
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~---g~~~~~~~--~~~~g~l~~~~~~~~~~~-------~~~~~~~~~~~g~l~G~~w   69 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG---GGPYSQTL--GTTFGALILSIAIAIFVL-------PEFWALSIFLVGLLSGAFW   69 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC---CCHHHHHH--HHHHHHHHHHHHHHHHhC-------CcccccHHHHHHHHHHHHH
Confidence            57889999999999999988865   44554443  344444444443332221       1111233444455555555


Q ss_pred             HHHHHHHHHHhhccchhHHHHhhh-hHHHHHHHHHHHHhCCCCcchhh----HHHHHHHHHHHHHhhhhe
Q 018814          282 FFLNYSIFLNTTLNSAVTQTICGN-LKDLFTIGLGWILFGGLPFDFLN----VFGQLLGFLGSGLYAYYK  346 (350)
Q Consensus       282 ~~~~~~~~~~~~~~~a~~~sv~~~-~~~v~~~~ls~~~~~e~~~t~~~----~~G~~li~~g~~~~~~~~  346 (350)
                      ...|++.+.++++.+....-.+.+ ..++...+++.++||| +.+..+    ++|.+++++|+++....+
T Consensus        70 ~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e-~~t~~~~~~~~~g~~l~l~G~~l~~~~~  138 (290)
T TIGR00776        70 ALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGE-WSTSIQTLLGLLALILIIIGVYLTSRSK  138 (290)
T ss_pred             HhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhh-ccchHHHHHHHHHHHHHHHhHheEEecc
Confidence            556677889999988888766666 8888999999999999 999988    999999999999876543

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.73  E-value=0.0009  Score=51.80  Aligned_cols=63  Identities=11%  Similarity=-0.052  Sum_probs=52.5

Q ss_pred             HHHHHHHHH-HHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhh
Q 018814          280 LAFFLNYSI-FLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYA  343 (350)
Q Consensus       280 ~~~~~~~~~-~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~  343 (350)
                      +++...+.. ..++++.+...+...-++.++.+.++|+++||| ++|+.+++|.++++.|+....
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E-~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHE-PVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHh
Confidence            334333333 477888998888777789999999999999999 999999999999999998765

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.66  E-value=0.0034  Score=50.60  Aligned_cols=132  Identities=22%  Similarity=0.196  Sum_probs=96.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHHHH
Q 018814          203 YAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAF  282 (350)
Q Consensus       203 ~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  282 (350)
                      .++++.+.++.+++....-++.++.+ |++.-.+.+...+.+.+.......++. +.   ....+..+|.  ...|+++.
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~~g-s~~~as~i~~~~G~i~~~i~~~~~~~~-~~---~~~~~~p~w~--~lGG~lG~   75 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKALG-SPLVASFISFGVGFILLLIILLITGRP-SL---ASLSSVPWWA--YLGGLLGV   75 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHHHHhccc-cc---chhccCChHH--hccHHHHH
Confidence            57788999999999999999987443 599999999999988888877776654 21   1122222222  33778887


Q ss_pred             HHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHH--hCC--CCcchhhHHHHHHHHHHHHH
Q 018814          283 FLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWIL--FGG--LPFDFLNVFGQLLGFLGSGL  341 (350)
Q Consensus       283 ~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~--~~e--~~~t~~~~~G~~li~~g~~~  341 (350)
                      ..-.+....+++.++...........+...++=.-+  ||.  .++++.+++|.+++++|+.+
T Consensus        76 ~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   76 FFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            777777788899999888887777776665544432  322  27999999999999999863

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=97.66  E-value=0.0032  Score=56.95  Aligned_cols=139  Identities=21%  Similarity=0.188  Sum_probs=94.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHH
Q 018814          200 FFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCI  279 (350)
Q Consensus       200 ~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  279 (350)
                      ..+....+..++.++......|...++ ..+......+....+.+...+....  +...  ..+..  ...+...+..++
T Consensus         6 ~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~--~~~~~~~~~~~~   78 (292)
T COG0697           6 LLGLLALLLWGLLWGLSFIALKLAVES-LDPFLFAAALRFLIAALLLLPLLLL--EPRG--LRPAL--RPWLLLLLLALL   78 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcc-cCChHHHHHHHHHHHHHHHHHHHHh--hccc--ccccc--cchHHHHHHHHH
Confidence            357778888889999998888888763 2455555555655555553222211  1000  01111  112234444444


Q ss_pred             HHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHH-HHhCCCCcchhhHHHHHHHHHHHHHhhhhe
Q 018814          280 LAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGW-ILFGGLPFDFLNVFGQLLGFLGSGLYAYYK  346 (350)
Q Consensus       280 ~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~-~~~~e~~~t~~~~~G~~li~~g~~~~~~~~  346 (350)
                      .....+...+.+++++++...++..+..|++..++++ ++++| +++..++.|..+.+.|+.+.....
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e-~~~~~~~~~~~~~~~Gv~lv~~~~  145 (292)
T COG0697          79 GLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGE-RLSLLQILGILLALAGVLLILLGG  145 (292)
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccC-CCcHHHHHHHHHHHHhHHheecCC
Confidence            4444555556889999999999999999999999997 66699 999999999999999998877543

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.65  E-value=0.00016  Score=57.53  Aligned_cols=70  Identities=16%  Similarity=0.233  Sum_probs=61.8

Q ss_pred             hhHH-HHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHH--HhccccCcchhhhHHHhhhhceeeecc
Q 018814          125 LPLA-VAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYF--LAGQKYTPPVVGSVGLIILGAFVAGAR  194 (350)
Q Consensus       125 ~~~~-~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~--~~~e~~~~~~~~~~~l~~~Gv~l~~~~  194 (350)
                      +..| .++.+..++++.+++..|++.+.-+.+..+.++.+.++.  ++||++++++++|+.++++|+.++..+
T Consensus        51 i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~  123 (129)
T PRK02971         51 VLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP  123 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence            4445 678888899999999999999999999998888888885  899999999999999999999986543

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.63  E-value=0.002  Score=59.32  Aligned_cols=123  Identities=14%  Similarity=0.031  Sum_probs=90.0

Q ss_pred             HHHHHHHHhhccCCCC--hhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHh
Q 018814          215 IYLATIARIGKSSGLN--SFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNT  292 (350)
Q Consensus       215 ~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  292 (350)
                      .+.+.++++.++...+  +..+++.|...+.+...+.......      .+.  +..-+.-....+++-.+.....+.++
T Consensus        14 ~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~------~~~--~~~~~~~~~~~~~~~~~~~~~~~~al   85 (303)
T PF08449_consen   14 SYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKF------PKS--RKIPLKKYAILSFLFFLASVLSNAAL   85 (303)
T ss_pred             HHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccc------cCC--CcChHHHHHHHHHHHHHHHHHHHHHH
Confidence            4556778887654445  6778888887777766655443320      000  11112333444555666666677889


Q ss_pred             hccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhhe
Q 018814          293 TLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYK  346 (350)
Q Consensus       293 ~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~  346 (350)
                      ++.+-.+..+....+++..++++.+++|+ +.+..++.+.+++.+|+.+....+
T Consensus        86 ~~i~~p~~~~~ks~~~i~vmi~~~l~~~k-~y~~~~~~~v~li~~Gv~~~~~~~  138 (303)
T PF08449_consen   86 KYISYPTQIVFKSSKPIPVMILGVLILGK-RYSRRQYLSVLLITIGVAIFTLSD  138 (303)
T ss_pred             HhCChHHHHHHhhhHHHHHHHHHHHhcCc-cccHHHHHHHHHHHhhHheeeecc
Confidence            99999999999999999999999999999 999999999999999999987654

; GO: 0055085 transmembrane transport

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.41  E-value=0.0016  Score=50.16  Aligned_cols=66  Identities=14%  Similarity=0.266  Sum_probs=52.3

Q ss_pred             HHHHHHHHH-HHHhhccch-hHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhhe
Q 018814          280 LAFFLNYSI-FLNTTLNSA-VTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYK  346 (350)
Q Consensus       280 ~~~~~~~~~-~~~~~~~~a-~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~  346 (350)
                      .++..++.. ..++++.+- ..+++..-+..+..++.|+++|+| ++|+.+++|+.++++|+...+..+
T Consensus        38 ~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e-~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQ-RLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHhcCC
Confidence            344444433 366777665 557777888999999999999999 999999999999999999987644

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.27  E-value=0.012  Score=54.53  Aligned_cols=138  Identities=13%  Similarity=0.142  Sum_probs=89.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhccCCCC-hhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHH
Q 018814          201 FGYAVVFLANITTAIYLATIARIGKSSGLN-SFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCI  279 (350)
Q Consensus       201 ~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  279 (350)
                      .+.+++=.-+++-+...+.++.+.++ +.+ |....+++.....++..+............   ......+|.. +..++
T Consensus        13 ~~~~lgQ~lsl~~~~t~~~s~~l~~~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~---~~~~~~~w~y-~lla~   87 (334)
T PF06027_consen   13 IVLLLGQVLSLCITGTGTFSSLLANK-GVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWL---KVLKRPWWKY-FLLAL   87 (334)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHhc-CccCcHHHHHHHHHHHHHHHhhhhhhccccccch---hhcchhHHHH-HHHHH
Confidence            34444444445555555555555543 333 555555555443333333322211110000   0111222333 33478


Q ss_pred             HHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhh
Q 018814          280 LAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAY  344 (350)
Q Consensus       280 ~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~  344 (350)
                      +=...|+....+.++++.+.+.++.....+++.++|++++++ +.++.+++|+++.++|+.+...
T Consensus        88 ~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~-ry~~~~~~gv~i~i~Gv~lv~~  151 (334)
T PF06027_consen   88 LDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKR-RYSWFHILGVLICIAGVVLVVV  151 (334)
T ss_pred             HHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHh-hhhHHHHHHHHHHHhhhhheee
Confidence            888899999999999999999999999999999999999999 9999999999999999886553

Some of the sequences in this family are annotated as putative membrane proteins.

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.24  E-value=0.0031  Score=47.70  Aligned_cols=55  Identities=20%  Similarity=0.176  Sum_probs=49.0

Q ss_pred             HHhhccch-hHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhh
Q 018814          290 LNTTLNSA-VTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYY  345 (350)
Q Consensus       290 ~~~~~~~a-~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~  345 (350)
                      +++|+.+- +.+++.+-+..+...+.|+++|+| ++|..+++|..++++|+...+..
T Consensus        49 ~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E-~l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          49 LALKTIPLGVAYAIWTGIGIVGTALVGVLLFGE-SLSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             HHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCC-cCCHHHHHHHHHHHHHHHHhhhc
Confidence            66777765 668999999999999999999999 99999999999999999987653

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.20  E-value=0.0034  Score=49.03  Aligned_cols=56  Identities=14%  Similarity=0.134  Sum_probs=47.5

Q ss_pred             HHhhccch-hHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhhe
Q 018814          290 LNTTLNSA-VTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYK  346 (350)
Q Consensus       290 ~~~~~~~a-~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~  346 (350)
                      .++|+.+- ..+++..-+..+.+++.|+++||| ++|+.+++|++++++|+...+...
T Consensus        49 ~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E-~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         49 FAVKKIALGVAYALWEGIGILFITLFSVLLFDE-SLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCC-CCCHHHHHHHHHHHHHHHHhhcCC
Confidence            56676654 556777788899999999999999 999999999999999998887533

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.20  E-value=0.011  Score=45.48  Aligned_cols=53  Identities=23%  Similarity=0.311  Sum_probs=47.0

Q ss_pred             HHhhccch-hHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhh
Q 018814          290 LNTTLNSA-VTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYA  343 (350)
Q Consensus       290 ~~~~~~~a-~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~  343 (350)
                      .++|+.+- +.+++..-+..+.+.+.|+++||| ++|+.+++|+++++.|+...+
T Consensus        54 ~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e-~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         54 QAVKGIDLSVAYALWGGFGIAATLAAGWILFGQ-RLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHhc
Confidence            66777765 668899999999999999999999 999999999999999998754

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.15  E-value=0.0014  Score=51.24  Aligned_cols=69  Identities=10%  Similarity=0.175  Sum_probs=59.8

Q ss_pred             hhHHHHHHHHHHHhhhhhcccchhHHHHH-HHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeec
Q 018814          125 LPLAVAYLLYMVVSVESVRGVNVPMYTTL-RRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGA  193 (350)
Q Consensus       125 ~~~~~~~~~~~~~~~~al~~~~~s~~~~l-~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~  193 (350)
                      ...-+++..+.++...+++++|++.+-.+ ....-+.+.+.+.++++|+++..+++++.++++|+.....
T Consensus        34 ~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l  103 (120)
T PRK10452         34 ILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKS  103 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Confidence            34447788888999999999999966555 5789999999999999999999999999999999987543

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.10  E-value=0.0048  Score=47.05  Aligned_cols=54  Identities=9%  Similarity=-0.024  Sum_probs=47.9

Q ss_pred             HHhhccch-hHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhh
Q 018814          290 LNTTLNSA-VTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAY  344 (350)
Q Consensus       290 ~~~~~~~a-~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~  344 (350)
                      .++|+.+- ..+++..-+..+.+.+.|+++||| ++|+.+++|+.++++|+...+.
T Consensus        48 ~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e-~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         48 WAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGE-SASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCC-CCCHHHHHHHHHHHHHHHhhhc
Confidence            66776655 678999999999999999999999 9999999999999999988754

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=97.08  E-value=6.7e-05  Score=64.73  Aligned_cols=214  Identities=13%  Similarity=0.135  Sum_probs=144.1

Q ss_pred             cchHHHHHHhhHHHHHHHHHHHhhhhhcccchhHHHHHH-HHHHHHHHHHHHHHhccccCcchh----hhHHHhhhhcee
Q 018814          116 VPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLR-RTTVAFTMIMEYFLAGQKYTPPVV----GSVGLIILGAFV  190 (350)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~-~~~p~~~~l~~~~~~~e~~~~~~~----~~~~l~~~Gv~l  190 (350)
                      .+.+.+..-+.-|+++...+..++.|.+++.+|.+--+. .++.+-+-+++.+.+||-.+..+.    .++++.+.|+.+
T Consensus        54 ~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~l  133 (288)
T COG4975          54 LTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYL  133 (288)
T ss_pred             cchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheE
Confidence            344555555666789999999999999999999776444 678888999999999998776553    678889999999


Q ss_pred             eeccCc--------ccchhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHH---HHHHHHHHHHHHHHhccchhh
Q 018814          191 AGARDL--------SFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCN---GVICGPLLLLWTFLRGDLETT  259 (350)
Q Consensus       191 ~~~~~~--------~~~~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~  259 (350)
                      -+..|.        +.-..|....+.|.+.|-.|.+..|...    .+.++...-|   +.++++.+-   ...+|.   
T Consensus       134 Ts~~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~----v~g~saiLPqAiGMv~~ali~~---~~~~~~---  203 (288)
T COG4975         134 TSKQDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLFD----VDGLSAILPQAIGMVIGALILG---FFKMEK---  203 (288)
T ss_pred             eeeeccccccccChHhhhhheeeeeeeccceeeeEeeecccc----ccchhhhhHHHHHHHHHHHHHh---hccccc---
Confidence            766552        1114788888889999999988877664    3445544433   334433321   111110   


Q ss_pred             hcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchh----hHHHHHHH
Q 018814          260 INFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFL----NVFGQLLG  335 (350)
Q Consensus       260 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~----~~~G~~li  335 (350)
                           . .....+.-+..|+.=-..|...+.+.++.+-.+.=.++-+.-+.+++-|.++++| +-|-.    -++|.+++
T Consensus       204 -----~-~~K~t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~e-kKtkkEm~~v~iGiili  276 (288)
T COG4975         204 -----R-FNKYTWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGE-KKTKKEMVYVIIGIILI  276 (288)
T ss_pred             -----c-hHHHHHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEec-cCchhhhhhhhhhHHHH
Confidence                 0 1111234455566555666666666665554443334666778888999999999 76755    45688999


Q ss_pred             HHHHHHhhhhe
Q 018814          336 FLGSGLYAYYK  346 (350)
Q Consensus       336 ~~g~~~~~~~~  346 (350)
                      ++|..+....|
T Consensus       277 vvgai~lg~~K  287 (288)
T COG4975         277 VVGAILLGIAK  287 (288)
T ss_pred             HHHhhhhheec
Confidence            99888765443

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.07  E-value=0.0017  Score=49.17  Aligned_cols=69  Identities=14%  Similarity=0.193  Sum_probs=59.2

Q ss_pred             HhhHHHHHHHHHHHhhhhhcccchhH-HHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeee
Q 018814          124 TLPLAVAYLLYMVVSVESVRGVNVPM-YTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAG  192 (350)
Q Consensus       124 ~~~~~~~~~~~~~~~~~al~~~~~s~-~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~  192 (350)
                      .+..-+++..+.++.-.+++++|++. |.+-.....+.+.+.++++++|+.+..+++++.+.++|+....
T Consensus        33 ~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk  102 (106)
T COG2076          33 SILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLK  102 (106)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhh
Confidence            33344677778889999999999984 5677789999999999999999999999999999999998643

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.99  E-value=0.0028  Score=48.63  Aligned_cols=68  Identities=18%  Similarity=0.242  Sum_probs=58.0

Q ss_pred             HhhHHHHHHHHHHHhhhhhcccchhH-HHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceee
Q 018814          124 TLPLAVAYLLYMVVSVESVRGVNVPM-YTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVA  191 (350)
Q Consensus       124 ~~~~~~~~~~~~~~~~~al~~~~~s~-~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~  191 (350)
                      ....-+++..+.++...+++++|++. +.+-.....+.+.+.+.+++||++++.++.++.+++.|+...
T Consensus        38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         38 GILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            33444677778889999999999995 566667888999999999999999999999999999999763

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=96.99  E-value=0.0025  Score=49.12  Aligned_cols=67  Identities=12%  Similarity=0.212  Sum_probs=58.1

Q ss_pred             HHHHHHHHHHHhhhhhcccchhHHHHH-HHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeec
Q 018814          127 LAVAYLLYMVVSVESVRGVNVPMYTTL-RRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGA  193 (350)
Q Consensus       127 ~~~~~~~~~~~~~~al~~~~~s~~~~l-~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~  193 (350)
                      .-+++..+.++...+++.+|++.+-.+ ....-+.+.+.++++++|++++.++.++.++++|+.+...
T Consensus        36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            346777788889999999999976665 5688899999999999999999999999999999988543

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.98  E-value=0.0033  Score=47.97  Aligned_cols=67  Identities=18%  Similarity=0.201  Sum_probs=57.9

Q ss_pred             hHHHHHHHHHHHhhhhhcccchhH-HHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeee
Q 018814          126 PLAVAYLLYMVVSVESVRGVNVPM-YTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAG  192 (350)
Q Consensus       126 ~~~~~~~~~~~~~~~al~~~~~s~-~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~  192 (350)
                      ..-.++..+.++...+++++|++. +.+-.....+.+.+.+++++||++++.++.++.++++|++...
T Consensus        34 ~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         34 ITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence            334677788889999999999985 5566678999999999999999999999999999999998753

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=96.73  E-value=0.027  Score=49.25  Aligned_cols=130  Identities=15%  Similarity=0.119  Sum_probs=88.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHH
Q 018814           43 RGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLM  122 (350)
Q Consensus        43 ~~~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (350)
                      .+...++..+.+|....+..|.+=+.-   +...=+..-|+++.++..++.....-              +...+.+...
T Consensus       148 ~Gv~~Al~AG~~Wa~YIv~G~r~g~~~---~g~~g~a~gm~vAaviv~Pig~~~ag--------------~~l~~p~ll~  210 (292)
T COG5006         148 VGVALALGAGACWALYIVLGQRAGRAE---HGTAGVAVGMLVAALIVLPIGAAQAG--------------PALFSPSLLP  210 (292)
T ss_pred             HHHHHHHHHhHHHHHHHHHcchhcccC---CCchHHHHHHHHHHHHHhhhhhhhcc--------------hhhcChHHHH
Confidence            456777777888887777777665421   23334555677777776665442110              0112222233


Q ss_pred             HHhhHHHH-HHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhce
Q 018814          123 HTLPLAVA-YLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAF  189 (350)
Q Consensus       123 ~~~~~~~~-~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~  189 (350)
                      .-+..+++ -..-..+...+++..|...+.++.++.|.+.++...++++|+++..+|.++..++++.+
T Consensus       211 laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa  278 (292)
T COG5006         211 LALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA  278 (292)
T ss_pred             HHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence            33333322 22334588899999999999999999999999999999999999999999988887664

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=96.71  E-value=0.0084  Score=54.95  Aligned_cols=117  Identities=21%  Similarity=0.213  Sum_probs=81.6

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHH
Q 018814          199 DFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSC  278 (350)
Q Consensus       199 ~~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  278 (350)
                      ...|..+++.|+++.+...+++|+-..|.+.++..-.  .                     ...+...++.||..++.. 
T Consensus         5 ~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~--~---------------------~~~~~l~~~~W~~G~~~~-   60 (300)
T PF05653_consen    5 FYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAG--S---------------------GGRSYLRRPLWWIGLLLM-   60 (300)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc--c---------------------hhhHHHhhHHHHHHHHHH-
Confidence            3579999999999999999998886553222111100  0                     001112233344443322 


Q ss_pred             HHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhh
Q 018814          279 ILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYA  343 (350)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~  343 (350)
                      .++...+   +.+....+++.++.++.+.-++..+++..+++| +++..++.|.++++.|..+..
T Consensus        61 ~~g~~~~---~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e-~~~~~~~~G~~l~i~G~~liv  121 (300)
T PF05653_consen   61 VLGEILN---FVALGFAPASLVAPLGALSLVFNAVLARFFLGE-KLTRRDIVGCALIILGSVLIV  121 (300)
T ss_pred             hcchHHH---HHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcc-cchHhHHhhHHHHHhhheeeE
Confidence            2333333   345677788999999999999999999999999 999999999999999987654

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.66  E-value=0.007  Score=45.22  Aligned_cols=56  Identities=14%  Similarity=0.189  Sum_probs=35.4

Q ss_pred             HHHHHHHHHhhhhhcccchhHH-HHHHHHHHHHHHHHHHHHhccccCcchhhhHHHh
Q 018814          129 VAYLLYMVVSVESVRGVNVPMY-TTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLI  184 (350)
Q Consensus       129 ~~~~~~~~~~~~al~~~~~s~~-~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~  184 (350)
                      .++..+.++...+++++|++.+ .+......+.+.+.+.+++||+++..++.++.++
T Consensus        37 ~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   37 VGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            5788888999999999999966 5667799999999999999999999999998763

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=96.57  E-value=0.013  Score=52.02  Aligned_cols=74  Identities=18%  Similarity=0.108  Sum_probs=65.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhh
Q 018814          271 LVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYY  345 (350)
Q Consensus       271 ~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~  345 (350)
                      .+....-+++=...|...+.+.++.+|.+..+....|.+++.++++++++. +++..||.+..+...|+.+....
T Consensus        17 ~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r-~ls~~qW~aL~lL~~Gv~lv~~~   90 (244)
T PF04142_consen   17 TLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKR-RLSRRQWLALFLLVAGVVLVQLS   90 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHc-ccchhhHHHHHHHHHHHheeecC
Confidence            355566667767788888999999999999999999999999999999999 99999999999999999987654

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.39  E-value=0.011  Score=45.53  Aligned_cols=71  Identities=11%  Similarity=0.165  Sum_probs=57.9

Q ss_pred             HHHHHhhHHHHHHHHHHHhhhhhcccchhHHHHH-HHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceee
Q 018814          120 TLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTL-RRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVA  191 (350)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l-~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~  191 (350)
                      .++..+|..+- ..+...++..+...+.|.+.-+ .+++-+||++.++++.+|..+++.+.|+.++++|+.+.
T Consensus        41 n~~y~ipf~lN-q~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   41 NPKYIIPFLLN-QSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             hHHHHHHHHHH-HHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            34555555444 4455677888999999988777 58999999999999999999999999999999999874

Many members are annotated as potential transmembrane proteins.

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=96.38  E-value=0.086  Score=47.16  Aligned_cols=66  Identities=18%  Similarity=0.170  Sum_probs=56.1

Q ss_pred             HhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchh----hhHHHhhhhce
Q 018814          124 TLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVV----GSVGLIILGAF  189 (350)
Q Consensus       124 ~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~----~~~~l~~~Gv~  189 (350)
                      -+..|+.+...+.+++.+.+...++.+-.+..+.++...+.+.+++||+=+++++    .++++.++|.+
T Consensus       198 nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i  267 (269)
T PF06800_consen  198 NILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI  267 (269)
T ss_pred             hhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence            4555899999999999999999999999999999999999999999999888865    45555555554

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.16  E-value=0.24  Score=40.16  Aligned_cols=139  Identities=16%  Similarity=0.147  Sum_probs=83.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHH
Q 018814          200 FFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCI  279 (350)
Q Consensus       200 ~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  279 (350)
                      ....++++.+.++-.++.-..-++.+..+ +|.--.+.+...+...+..+........+. .  ......+|.  ...|+
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~-spl~As~isf~vGt~~L~~l~l~~~~~~~~-a--~~~~~pwW~--~~GG~   77 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLG-SPLLASLISFLVGTVLLLILLLIKQGHPGL-A--AVASAPWWA--WIGGL   77 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCch-h--hccCCchHH--HHccc
Confidence            35677888899999999888888876433 577777778888777777666553322111 1  111112222  23335


Q ss_pred             HHHHHHHHHHHHhhccchhHHHHhhhhHH-HHHHHHHHH-HhCC--CCcchhhHHHHHHHHHHHHHhhh
Q 018814          280 LAFFLNYSIFLNTTLNSAVTQTICGNLKD-LFTIGLGWI-LFGG--LPFDFLNVFGQLLGFLGSGLYAY  344 (350)
Q Consensus       280 ~~~~~~~~~~~~~~~~~a~~~sv~~~~~~-v~~~~ls~~-~~~e--~~~t~~~~~G~~li~~g~~~~~~  344 (350)
                      ++...-........+.++++...+..... +.+.++.-+ ++|+  .++++..+.|++++++|+++...
T Consensus        78 lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~  146 (150)
T COG3238          78 LGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARR  146 (150)
T ss_pred             hhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcc
Confidence            55555444456667777765544444444 444443332 2333  26999999999999999555443

>PRK13499 rhamnose-proton symporter; Provisional

Probab=96.07  E-value=0.11  Score=48.33  Aligned_cols=137  Identities=14%  Similarity=0.114  Sum_probs=87.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHH--HHHHHHHHHH--HHHHhccchhhhcCCCccchhHHHHHH
Q 018814          200 FFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCN--GVICGPLLLL--WTFLRGDLETTINFPYLLSPGFLVVLC  275 (350)
Q Consensus       200 ~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~  275 (350)
                      ..|+++++++++|++.+.+-.|+ .++   -++|.. |-  .+++.++...  ..+..++..   +.-...+...+..-+
T Consensus         6 ~~G~~~~~i~~~~~GS~~~p~K~-~k~---w~wE~~-W~v~gi~~wl~~~~~~g~~~~~~f~---~~~~~~~~~~~~~~~   77 (345)
T PRK13499          6 ILGIIWHLIGGASSGSFYAPFKK-VKK---WSWETM-WSVGGIFSWLILPWLIAALLLPDFW---AYYSSFSGSTLLPVF   77 (345)
T ss_pred             HHHHHHHHHHHHHhhcccccccc-cCC---CchhHH-HHHHHHHHHHHHHHHHHHHHhhhHH---HHHHhcCHHHHHHHH
Confidence            47999999999999999888887 332   345544 32  1222222221  111112221   111123455566667


Q ss_pred             HHHHHHHHHHHHHHHHhhccch-hHHHHhhhhHHHHHHHHHHHHhCCCC------cchhhHHHHHHHHHHHHHhhh
Q 018814          276 FSCILAFFLNYSIFLNTTLNSA-VTQTICGNLKDLFTIGLGWILFGGLP------FDFLNVFGQLLGFLGSGLYAY  344 (350)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~a-~~~sv~~~~~~v~~~~ls~~~~~e~~------~t~~~~~G~~li~~g~~~~~~  344 (350)
                      +.|++=-..|..++..+|+.+- ....+..-++-+..++++.+++||-+      -....++|.+++++|+.+.++
T Consensus        78 l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~  153 (345)
T PRK13499         78 LFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGR  153 (345)
T ss_pred             HHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence            7777766677777777777654 44556666778888999999998621      124578899999999999987

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=95.90  E-value=0.37  Score=44.43  Aligned_cols=132  Identities=13%  Similarity=0.091  Sum_probs=85.4

Q ss_pred             HHHHHHHHHHHHhhc--cCCCChhhHHHHHHHHHHHHHHHHHHHhc-c-chhh-hcCC--CccchhHHHHHHHHHHHHHH
Q 018814          211 ITTAIYLATIARIGK--SSGLNSFGLMWCNGVICGPLLLLWTFLRG-D-LETT-INFP--YLLSPGFLVVLCFSCILAFF  283 (350)
Q Consensus       211 ~~~a~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~-~~~~-~~~~--~~~~~~~~~~l~~~~~~~~~  283 (350)
                      +-.+......|.-.+  +.++.|.+..+.+=++-.+++....+... . .... ....  .+.++....-+..-+++=.+
T Consensus        25 ~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~vPa~iYal  104 (345)
T KOG2234|consen   25 AQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSVPALIYAL  104 (345)
T ss_pred             HHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHHHHHHHHH
Confidence            333334444444333  33567777766665554444444433321 0 0111 1111  11222223445555555556


Q ss_pred             HHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhh
Q 018814          284 LNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYA  343 (350)
Q Consensus       284 ~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~  343 (350)
                      .|...+.+.++.+|.++.+...+|...+.+++.+++++ +++..||...++...|+.+..
T Consensus       105 qNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~r-kLs~~Qw~Al~lL~~Gv~~vQ  163 (345)
T KOG2234|consen  105 QNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRR-KLSRLQWMALVLLFAGVALVQ  163 (345)
T ss_pred             hhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhh-hhhHHHHHHHHHHHHHHHHHh
Confidence            77666888999999999999999999999999999999 999999999999999998876

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=95.67  E-value=0.0061  Score=53.52  Aligned_cols=68  Identities=19%  Similarity=0.328  Sum_probs=55.9

Q ss_pred             HHHHHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhh
Q 018814          276 FSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAY  344 (350)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~  344 (350)
                      +=|+.++..-+..|++.++.+-..+.+.....|+++++++|++++| +.|.....|..+.+.|+.+..+
T Consensus       102 LRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE-~~t~~eaL~s~itl~GVVLIvR  169 (346)
T KOG4510|consen  102 LRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKE-PFTKFEALGSLITLLGVVLIVR  169 (346)
T ss_pred             eehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcC-CCcHHHHHHHHHhhheEEEEec
Confidence            3344444444555677778888888888999999999999999999 9999999999999999987754

>TIGR00803 nst UDP-galactose transporter

Probab=95.49  E-value=0.19  Score=43.88  Aligned_cols=63  Identities=11%  Similarity=0.047  Sum_probs=56.6

Q ss_pred             HHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhcee
Q 018814          128 AVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFV  190 (350)
Q Consensus       128 ~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l  190 (350)
                      .+..+....+-...++|.+....++...+.++++.+++.++++|+++...+.|+.+.+.|+.+
T Consensus       159 ~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       159 GLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            345556667888999999999999999999999999999999999999999999999999865

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=95.46  E-value=0.065  Score=39.94  Aligned_cols=54  Identities=15%  Similarity=0.115  Sum_probs=30.0

Q ss_pred             HHHHHHHH-HHHhhccchh-HHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHH
Q 018814          281 AFFLNYSI-FLNTTLNSAV-TQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLG  335 (350)
Q Consensus       281 ~~~~~~~~-~~~~~~~~a~-~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li  335 (350)
                      ++..++.. .+++|+.+.. .+++..-+..+...+.|+++||| ++|+.+++|+.++
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E-~~s~~~~~gi~lI   93 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGE-SLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH---------HHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCC-CCCHHHHhheeeC
Confidence            44444333 3677887664 45777888999999999999999 9999999998875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=95.32  E-value=0.53  Score=37.84  Aligned_cols=129  Identities=12%  Similarity=0.112  Sum_probs=88.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccc-cccCCCCccCCCCCCccchHHHHHH
Q 018814           46 NAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIIN-FTMGDSLMTSDSSSTFVPLKTLMHT  124 (350)
Q Consensus        46 ~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  124 (350)
                      +.+++-+..-..+..+|-.+-+..+  .|+.-++.-+..+.+.+.+.....+.+ .+.             .+...++.+
T Consensus         4 lla~~aG~~i~~q~~~N~~L~~~~g--s~~~as~i~~~~G~i~~~i~~~~~~~~~~~~-------------~~~~p~w~~   68 (138)
T PF04657_consen    4 LLALLAGALIALQAAFNGQLGKALG--SPLVASFISFGVGFILLLIILLITGRPSLAS-------------LSSVPWWAY   68 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhC--ccHHHHHHHHHHHHHHHHHHHHHhcccccch-------------hccCChHHh
Confidence            3445555666666777777776653  588888888888888877665543321 110             111123333


Q ss_pred             hhHHHHHHHHHHHhhhhhcccchhHHHHHH-HHHHHHHHHHHHH----HhccccCcchhhhHHHhhhhcee
Q 018814          125 LPLAVAYLLYMVVSVESVRGVNVPMYTTLR-RTTVAFTMIMEYF----LAGQKYTPPVVGSVGLIILGAFV  190 (350)
Q Consensus       125 ~~~~~~~~~~~~~~~~al~~~~~s~~~~l~-~~~p~~~~l~~~~----~~~e~~~~~~~~~~~l~~~Gv~l  190 (350)
                      + .|++-.....+...+...+.++..+.+. .-+.+...+++.+    ..++++++++..++.++++|+.+
T Consensus        69 l-GG~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   69 L-GGLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             c-cHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            3 4566677778888899999988777665 4556677777775    45788999999999999999864

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=95.00  E-value=0.049  Score=49.99  Aligned_cols=145  Identities=14%  Similarity=0.107  Sum_probs=103.2

Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHHHhh--cCCCCchHHHHHHHHHHHHHHHH-HHHHc-cccccccCCCCccCCCCCC
Q 018814           39 AMTRRGANAAISYMACAVLLVMFNKAALS--SYNFPCANVITLLQMISSCSFLY-FLRRW-KIINFTMGDSLMTSDSSST  114 (350)
Q Consensus        39 ~~~~~~~~~~l~~~~~~~~~~~~~K~~l~--~~~f~~p~~l~~~r~~~~~~~l~-~~~~~-~~~~~~~~~~~~~~~~~~~  114 (350)
                      +..+.|...+..+.+....-.++.|.+++  +.+.+ ++.+...+--++...+. +.... ....+. ..      . ..
T Consensus       159 ~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~-~~------~-~~  229 (316)
T KOG1441|consen  159 SFNLFGFISAMISNLAFALRNILSKKLLTSKGESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNKFV-GF------L-TA  229 (316)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccC-chHHHHHhhhHHHHHHhcchHhhhccccee-ee------e-cc
Confidence            35677888999999999999999999994  44443 55566666666666665 33221 111100 00      0 00


Q ss_pred             ccchHHHHHHhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeec
Q 018814          115 FVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGA  193 (350)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~  193 (350)
                      ..+.. .......+++..+.+...+..+..+++-++++....-=+++...++++++++++..+.+|..+.++|+.+...
T Consensus       230 ~~~~~-~~~~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~  307 (316)
T KOG1441|consen  230 PWFVT-FLILLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSR  307 (316)
T ss_pred             ccchh-hHHHHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHH
Confidence            12223 3334444577777888999999999999999999988888999999999999999999999999999988543

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=93.15  E-value=0.57  Score=43.48  Aligned_cols=67  Identities=10%  Similarity=0.084  Sum_probs=61.7

Q ss_pred             HHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeeccC
Q 018814          129 VAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARD  195 (350)
Q Consensus       129 ~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~  195 (350)
                      ++..++-+++-.|.-.++.-.+++-.+++.+..++...++.+++++...++|.+.+++|.+.+...+
T Consensus       326 igtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~  392 (416)
T KOG2765|consen  326 IGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISS  392 (416)
T ss_pred             HHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccc
Confidence            6778889999999999999999999999999999999999999999999999999999998876544

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=93.06  E-value=1.6  Score=39.50  Aligned_cols=73  Identities=11%  Similarity=0.132  Sum_probs=65.1

Q ss_pred             hHHHHHHhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhcee
Q 018814          118 LKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFV  190 (350)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l  190 (350)
                      .+-++.++..+.+-++++.+-+.-++.-..=+.+++..+-=++.++++.+.++.++++.+|.++.+.+.|..+
T Consensus       238 p~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l  310 (327)
T KOG1581|consen  238 PDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL  310 (327)
T ss_pred             hhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence            3567888889999999999999989888877888888888999999999999999999999999999888766

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=91.13  E-value=2.6  Score=36.40  Aligned_cols=74  Identities=12%  Similarity=0.013  Sum_probs=59.3

Q ss_pred             cchHHHHHHhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhce
Q 018814          116 VPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAF  189 (350)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~  189 (350)
                      .+.+.+..++.-|++-.+..++.-++++-++..++.+...+.-.-..+-+.+++++..+...+.++++++...+
T Consensus       219 l~~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~  292 (309)
T COG5070         219 LSVDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGA  292 (309)
T ss_pred             CChHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHH
Confidence            33445566677778888899999999999999999999999988888888888888888877777766554433

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=89.41  E-value=8.9  Score=31.17  Aligned_cols=134  Identities=12%  Similarity=0.035  Sum_probs=82.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCCccchHHHHH
Q 018814           44 GANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMH  123 (350)
Q Consensus        44 ~~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (350)
                      .++..+.-+.+.....-.|-.+-+..  ..|..-.+.-+.++..++..+...+..+ ++..          ......|+.
T Consensus         6 ~ll~~i~aG~~l~~Q~~iN~qL~~~~--~spl~As~isf~vGt~~L~~l~l~~~~~-~~~a----------~~~~~pwW~   72 (150)
T COG3238           6 YLLFAILAGALLPLQAAINGRLARYL--GSPLLASLISFLVGTVLLLILLLIKQGH-PGLA----------AVASAPWWA   72 (150)
T ss_pred             HHHHHHHHhhhhhhHHHHHHHHHHHc--CChHHHHHHHHHHHHHHHHHHHHHhcCC-Cchh----------hccCCchHH
Confidence            35566677777777888888887765  3688778888898888877766652221 1110          011122343


Q ss_pred             HhhHHHHHHHHHHHhhhhhcccchhHHH-HHHHHHHHHHHHHHHHHh----ccccCcchhhhHHHhhhhceee
Q 018814          124 TLPLAVAYLLYMVVSVESVRGVNVPMYT-TLRRTTVAFTMIMEYFLA----GQKYTPPVVGSVGLIILGAFVA  191 (350)
Q Consensus       124 ~~~~~~~~~~~~~~~~~al~~~~~s~~~-~l~~~~p~~~~l~~~~~~----~e~~~~~~~~~~~l~~~Gv~l~  191 (350)
                      +++ |++-...............++..+ +.-+-+-+.-++++.+=.    +++++..++.++++.++|+.+.
T Consensus        73 ~~G-G~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~  144 (150)
T COG3238          73 WIG-GLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLA  144 (150)
T ss_pred             HHc-cchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHh
Confidence            332 333333334444445555555444 444566677777776644    4789999999999999996553

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=88.38  E-value=0.25  Score=43.21  Aligned_cols=132  Identities=11%  Similarity=-0.006  Sum_probs=83.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHHHHHH
Q 018814          202 GYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILA  281 (350)
Q Consensus       202 G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  281 (350)
                      +++.+++=++.|+..-....|.-    -+|.+.+.=+.+-+.++.....++.         ....+...+..-+.+|.+=
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~G----G~p~qQ~lGtT~GALifaiiv~~~~---------~p~~T~~~~iv~~isG~~W   69 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKFG----GKPYQQTLGTTLGALIFAIIVFLFV---------SPELTLTIFIVGFISGAFW   69 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeecC----CChhHhhhhccHHHHHHHHHHheee---------cCccchhhHHHHHHhhhHh
Confidence            46778888888888765555543    3566655444443333333322211         1223444455666677766


Q ss_pred             HHHHHHHHHHhhccchhHHHHhh-hhHHHHHHHHHHHHhCCCCcchhh----HHHHHHHHHHHHHhhhhee
Q 018814          282 FFLNYSIFLNTTLNSAVTQTICG-NLKDLFTIGLGWILFGGLPFDFLN----VFGQLLGFLGSGLYAYYKL  347 (350)
Q Consensus       282 ~~~~~~~~~~~~~~~a~~~sv~~-~~~~v~~~~ls~~~~~e~~~t~~~----~~G~~li~~g~~~~~~~~~  347 (350)
                      .+.+..++++++..+...+...+ -++-+-+.++|+++||| =.+..+    .+..+++++|+++.+++++
T Consensus        70 s~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~E-W~t~~~~IlG~iAliliviG~~lTs~~~~  139 (288)
T COG4975          70 SFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHE-WTTPTQIILGFIALILIVIGIYLTSKQDR  139 (288)
T ss_pred             hhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEec-cCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence            66777778888877766655444 45667778999999999 555443    3356788899998887665

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=86.89  E-value=0.58  Score=39.48  Aligned_cols=61  Identities=23%  Similarity=0.230  Sum_probs=53.6

Q ss_pred             HHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhh
Q 018814          283 FLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAY  344 (350)
Q Consensus       283 ~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~  344 (350)
                      ..||....++++.+|+.++-...-...+.-+++|+++|| .+....++..++.+.|+...++
T Consensus        65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D-~~~~~kIlaailAI~GiVmiay  125 (290)
T KOG4314|consen   65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGD-RFMGFKILAAILAIGGIVMIAY  125 (290)
T ss_pred             cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhcc-chhhhhHHHHHHHhCcEEEEEe
Confidence            346666688899999999999999999999999999999 9999999999999999877654

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=86.26  E-value=4.7  Score=36.76  Aligned_cols=140  Identities=13%  Similarity=0.033  Sum_probs=87.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHc-cccccccCCCCccCCCCCCccchHHHHH
Q 018814           45 ANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRW-KIINFTMGDSLMTSDSSSTFVPLKTLMH  123 (350)
Q Consensus        45 ~~~~l~~~~~~~~~~~~~K~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (350)
                      -.++....++........|...+.-+++ -+.+.++.-+...+.+...... +..+  ...     .+.+.+.+...+..
T Consensus       159 Y~w~~~n~~~~a~~~v~~kk~vd~~~l~-~~~lv~yNnl~~L~~l~~~~~~~ge~~--~l~-----~~~~~~~~~~~~~~  230 (314)
T KOG1444|consen  159 YSWALANCLTTAAFVVYVKKSVDSANLN-KFGLVFYNNLLSLPPLLILSFITGELD--ALS-----LNFDNWSDSSVLVV  230 (314)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccccc-ceeEEeehhHHHHHHHHHHHHHhcchH--HHH-----hhcccccchhHHHH
Confidence            3455555556666666677777654442 2334445555555554444322 2111  000     01111122233333


Q ss_pred             HhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeee
Q 018814          124 TLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAG  192 (350)
Q Consensus       124 ~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~  192 (350)
                      +..-+++-.+-.++.++|.+..|+.+.++.....-..+.+...++.+++.++....|+.+.++|-++..
T Consensus       231 ~~lScv~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~  299 (314)
T KOG1444|consen  231 MLLSCVMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYS  299 (314)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHh
Confidence            334346667778999999999999999999988888888888888889999999999999988887743

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=85.41  E-value=1.8  Score=33.35  Aligned_cols=51  Identities=22%  Similarity=0.161  Sum_probs=36.9

Q ss_pred             HHhhccchhHHHHh-hhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHH
Q 018814          290 LNTTLNSAVTQTIC-GNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGL  341 (350)
Q Consensus       290 ~~~~~~~a~~~sv~-~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~  341 (350)
                      ..+++.+-+..... +.+.=+++.+.++++.+| ..+...++|+++++.|+.+
T Consensus        60 ~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~-~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   60 LLLGSADLSLAVPIANSLAFVFTALTGWLLGEE-VISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HHHhcCCceeeehHHhHHHHHHHHHHHHHhcCc-ccchhHHHHHHHHHcCeee
Confidence            33455544433333 577778888888777666 8899999999999999864

Many members are annotated as potential transmembrane proteins.

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=85.27  E-value=0.84  Score=39.68  Aligned_cols=72  Identities=14%  Similarity=0.052  Sum_probs=61.2

Q ss_pred             HHHHHHhhHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhcee
Q 018814          119 KTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFV  190 (350)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l  190 (350)
                      ..++.+..+++.-.+++++-+.-..+-++=+-+++..+--.|+.+.+.++++..++.++|+|..+.+.|...
T Consensus       239 ~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~  310 (337)
T KOG1580|consen  239 YVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTA  310 (337)
T ss_pred             HHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhh
Confidence            356667777888888888888888777776677777788899999999999999999999999999998876

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=82.29  E-value=25  Score=32.68  Aligned_cols=138  Identities=12%  Similarity=0.169  Sum_probs=69.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHH-HHHHHHHHHHHHHH--HHhccchhhhcCCCccchhHHHHHHH
Q 018814          200 FFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMW-CNGVICGPLLLLWT--FLRGDLETTINFPYLLSPGFLVVLCF  276 (350)
Q Consensus       200 ~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~  276 (350)
                      ..|+++..+++++.+.+.+=.||..+   . ++|... .+.+++.++..+..  +..+|..+...   ..+...+.....
T Consensus         6 i~Gii~h~iGg~~~~sfy~P~kkvk~---W-sWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~---~~~~~~l~~~~l   78 (344)
T PF06379_consen    6 ILGIIFHAIGGFASGSFYVPFKKVKG---W-SWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYS---ATPASTLFWTFL   78 (344)
T ss_pred             HHHHHHHHHHHHHhhhhccchhhcCC---c-cHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHH---hCChhHHHHHHH
Confidence            47999999999999999888777642   3 455433 35555655554332  22233322221   112222222222


Q ss_pred             HHHH-HHHHHHHHHHHhhccc-hhHHHHhhhhHHHHHHHHHHHHhCCC------CcchhhHHHHHHHHHHHHHhhhh
Q 018814          277 SCIL-AFFLNYSIFLNTTLNS-AVTQTICGNLKDLFTIGLGWILFGGL------PFDFLNVFGQLLGFLGSGLYAYY  345 (350)
Q Consensus       277 ~~~~-~~~~~~~~~~~~~~~~-a~~~sv~~~~~~v~~~~ls~~~~~e~------~~t~~~~~G~~li~~g~~~~~~~  345 (350)
                      .|++ ++. +...=..+|+.+ +...++.--+..++.+++--++.|+.      +-....++|.++.++|+.+..+.
T Consensus        79 ~G~lWGIG-gltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A  154 (344)
T PF06379_consen   79 FGVLWGIG-GLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA  154 (344)
T ss_pred             HHHHHhcc-hhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH
Confidence            2322 111 010013344443 23333333334444444433332210      23456889999999999998764

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=82.15  E-value=0.59  Score=42.51  Aligned_cols=120  Identities=17%  Similarity=0.210  Sum_probs=79.6

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhcCCCccchhHHHHHHHH
Q 018814          198 FDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFS  277 (350)
Q Consensus       198 ~~~~G~~l~l~sa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  277 (350)
                      ++..|.++++.|++..+...+..||-.+|......+  .                 +    ....+...++ .|+.-+..
T Consensus        18 d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~~~~r--a-----------------~----~gg~~yl~~~-~Ww~G~lt   73 (335)
T KOG2922|consen   18 DNIIGLVLAISSSIFIGSSFILKKKGLKRAGASGLR--A-----------------G----EGGYGYLKEP-LWWAGMLT   73 (335)
T ss_pred             CceeeeeehhhccEEEeeehhhhHHHHHHHhhhccc--c-----------------c----CCCcchhhhH-HHHHHHHH
Confidence            446799999999999998888877765532110000  0                 0    0111222222 23333333


Q ss_pred             HHHHHHHHHHHHHHhhccchhHHHHhhhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhh
Q 018814          278 CILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYY  345 (350)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~a~~~sv~~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~  345 (350)
                      -.+|=..|++.   ....+++-++.++.+.-+.+++++..+++| ++++...+|+++.++|..+...+
T Consensus        74 m~vGei~NFaA---YaFAPasLVtPLGAlsvi~saila~~~L~E-kl~~~g~lGc~l~v~Gst~iV~h  137 (335)
T KOG2922|consen   74 MIVGEIANFAA---YAFAPASLVTPLGALSVIISAILASFFLKE-KLNLLGILGCVLCVVGSTTIVIH  137 (335)
T ss_pred             HHHHhHhhHHH---HhhchHhhhccchhHHHHHHHHHHHHHHHH-HHHHhhhhheeEEecccEEEEEe
Confidence            33454555443   345567888888999999999999999999 99999999999999998766543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	350
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.27
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.19
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.11
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.1

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.27  E-value=1.9e-06  Score=68.02  Aligned_cols=69  Identities=13%  Similarity=0.213  Sum_probs=46.5

Q ss_pred             HHHHHHHHHHHH-HHHhhccchhHHHHh-hhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhhe
Q 018814          277 SCILAFFLNYSI-FLNTTLNSAVTQTIC-GNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYK  346 (350)
Q Consensus       277 ~~~~~~~~~~~~-~~~~~~~~a~~~sv~-~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~  346 (350)
                      .+++++..++.. .+++|+.++..+..+ ..+.|++++++|+++||| ++|+.+++|++++++|+++.+..+
T Consensus        35 l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE-~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQ-RLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHhcCC
Confidence            334444444444 588999999987776 899999999999999999 999999999999999999987643

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.19  E-value=2.6e-06  Score=64.88  Aligned_cols=67  Identities=10%  Similarity=0.206  Sum_probs=61.1

Q ss_pred             HHHHHHHHHHhhhhhcccchhHHHHH-HHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeecc
Q 018814          128 AVAYLLYMVVSVESVRGVNVPMYTTL-RRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR  194 (350)
Q Consensus       128 ~~~~~~~~~~~~~al~~~~~s~~~~l-~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~  194 (350)
                      .+++.+..++...++++.|++.+-.+ ..+.|+++.+++++++||++++.++.|+.++++|+.+....
T Consensus        37 ~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            36778888999999999999999877 89999999999999999999999999999999999886543

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.11  E-value=2.6e-06  Score=67.33  Aligned_cols=66  Identities=11%  Similarity=0.220  Sum_probs=49.8

Q ss_pred             HHHHHHHHHHhhhhhcccchhHHHHH-HHHHHHHHHHHHHHHhccccCcchhhhHHHhhhhceeeec
Q 018814          128 AVAYLLYMVVSVESVRGVNVPMYTTL-RRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGA  193 (350)
Q Consensus       128 ~~~~~~~~~~~~~al~~~~~s~~~~l-~~~~p~~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~  193 (350)
                      .+++.+..++++.+++++|++.+..+ .++.|+++.++++++++|++++.+++|+.++++|+.+...
T Consensus        37 i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~  103 (137)
T 2i68_A           37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINL  103 (137)
T ss_dssp             HHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            36788888999999999999988777 8999999999999999999999999999999999998644

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.10  E-value=1.8e-05  Score=60.11  Aligned_cols=67  Identities=13%  Similarity=0.220  Sum_probs=55.6

Q ss_pred             HHHHHHHHHH-HHHhhccchhHHHHh-hhhHHHHHHHHHHHHhCCCCcchhhHHHHHHHHHHHHHhhhhe
Q 018814          279 ILAFFLNYSI-FLNTTLNSAVTQTIC-GNLKDLFTIGLGWILFGGLPFDFLNVFGQLLGFLGSGLYAYYK  346 (350)
Q Consensus       279 ~~~~~~~~~~-~~~~~~~~a~~~sv~-~~~~~v~~~~ls~~~~~e~~~t~~~~~G~~li~~g~~~~~~~~  346 (350)
                      ++++...+.. .+++|+.+...+... ..+.|+.++++|+++||| ++|+.+++|.++++.|+...+..+
T Consensus        37 ~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E-~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQ-RLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHhcCC
Confidence            3344444433 478899998888666 899999999999999999 999999999999999999987654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00