Citrus Sinensis ID: 018894

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------35
Protein Sequence
MSEGQKFQLGTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFDPRAVMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDLQLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLESQQKASETSSQLPQVVKEGETDPLINAEKGTGDGVAKAPAWNSNKDLHA
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEEEEEEEEEEccccHHcHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcHHHHHccccccccHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHEEEEEEHHHHccccccHHHHHHHHHHHHHHHEHHHHEHcccccHHcccccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
msegqkfqlgtvGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLfehkpfdpravmgFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDLQLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSstqllyqscpyqalTLFIigpfldglltnknvfafkyTPYVLFFIVLSCLISVSVNFSTFLVigktspvtYQVLGHLKTCLVLAFGYvllhdpfsWRNILGILIAVIGMVLYSYCCSlesqqkasetssqlpqvvkegetdplinaekgtgdgvakapawnsnkdlha
Flexible Loop (DISEMBL)
msegqkfqlgtvgALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFDPRAVMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDLQLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLESQQKASETSSQLPQVVKEGETDPLinaekgtgdgvakapawnsnkdlha
Low Complexity Region (SEG)
MSEGQKFQLGTVGAlslsvissvsiviCNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFDPRAVMGFgvlngisigllnlslgfnsvgFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSlvillvgvgiATVTDlqlnvlgsvlsllavlTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLESQQKASETSSQLPQVVKEGETDPLINAEKGTGDGVAKAPAWNSNKDLHA
Disordered region (IsUnstruct)
*******QLGTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFDPRAVMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDLQLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSL**************************************************
Disordered Region (DISOPRED)
************GALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFDPRAVMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDLQLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLY********************************************************
Disordered Region (DISEMBL)
*********GTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFDPRAVMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDLQLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSL*****************KEGETDPLINAEKGTGDGVAKAPAWNSNKDLHA
Disordered Region (DISPRO)
****QKFQLGTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFDPRAVMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDLQLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLE*************************************************
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSEGQKFQLGTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFDPRAVMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDLQLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLESQQKASETSSQLPQVVKEGETDPLINAEKGTGDGVAKAPAWNSNKDLHA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	349	2.2.26 [Sep-21-2011]
Q8RXL8	357	Uncharacterized membrane	yes	no	0.997	0.974	0.863	1e-169
Q9SRE4	347	UDP-galactose transporter	no	no	0.836	0.841	0.393	1e-53
Q1JQ66	313	Solute carrier family 35	yes	no	0.856	0.955	0.331	2e-39
Q7Z769	313	Solute carrier family 35	yes	no	0.853	0.952	0.322	1e-33
A4IFK2	313	Solute carrier family 35	yes	no	0.853	0.952	0.325	2e-33
Q6PGC7	313	Solute carrier family 35	yes	no	0.853	0.952	0.312	8e-33
Q9C521	336	UDP-galactose transporter	no	no	0.873	0.907	0.275	4e-24
Q9SFE9	341	GDP-mannose transporter G	no	no	0.914	0.935	0.266	6e-23
Q3E6T0	349	Probable sugar phosphate/	no	no	0.871	0.871	0.264	6e-15
Q9LFN3	351	Probable sugar phosphate/	no	no	0.893	0.888	0.251	7e-15

>sp|Q8RXL8|Y1689_ARATH Uncharacterized membrane protein At1g06890 OS=Arabidopsis thaliana GN=At1g06890 PE=1 SV=1

 Score =  595 bits (1535), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 309/358 (86%), Positives = 330/358 (92%), Gaps = 10/358 (2%)

Query: 1   MSEGQKFQLGTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVAL 60
           MSEGQKFQLGT+GALSLSV+SSVSIVICNKALIS+LGFTFATTLTSWHLLVTFCSLHVAL
Sbjct: 1   MSEGQKFQLGTIGALSLSVVSSVSIVICNKALISTLGFTFATTLTSWHLLVTFCSLHVAL 60

Query: 61  WMKLFEHKPFDPRAVMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFF 120
           WMK+FEHKPFDPRAVMGFG+LNGISIGLLNLSLGFNSVGFYQMTKLAIIPCT+LLETLFF
Sbjct: 61  WMKMFEHKPFDPRAVMGFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVLLETLFF 120

Query: 121 RKKFSRNIQLSLVILLVGVGIATVTDLQLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKV 180
           RKKFSR IQ SL ILL+GVGIATVTDLQLN+LGSVLSLLAV+TTCVAQIMTNTIQKKFKV
Sbjct: 121 RKKFSRKIQFSLTILLLGVGIATVTDLQLNMLGSVLSLLAVVTTCVAQIMTNTIQKKFKV 180

Query: 181 SSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFST 240
           SSTQLLYQSCPYQA+TLF+ GPFLDGLLTN+NVFAFKYT  V+FFIVLSCLISVSVNFST
Sbjct: 181 SSTQLLYQSCPYQAITLFVTGPFLDGLLTNQNVFAFKYTSQVVFFIVLSCLISVSVNFST 240

Query: 241 FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLE 300
           FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLL DPF WRNILGIL+AVIGMV+YSY CS+E
Sbjct: 241 FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLRDPFDWRNILGILVAVIGMVVYSYYCSIE 300

Query: 301 SQQKASETSSQLPQVVKEGETDPLINAEKGT------GDGVAK---APAWNSNKDLHA 349
           +QQKASETS+QLPQ +KE E DPLI AE G+      G GV +   AP WNSNKD  A
Sbjct: 301 TQQKASETSTQLPQ-MKESEKDPLIAAENGSGVLSDGGGGVQQKTVAPVWNSNKDFQA 357

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SRE4|UGAL2_ARATH UDP-galactose transporter 2 OS=Arabidopsis thaliana GN=UDP-GALT2 PE=2 SV=1

 Score =  210 bits (534), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 125/318 (39%), Positives = 195/318 (61%), Gaps = 26/318 (8%)

Query: 5   QKFQLGTVGALSLSVISSVSIVICNKALISS--LGFTFATTLTSWHLLVTF--------- 53
           +K  +  VGA +++VISSV I++ NK L+SS   GF FATTLT +H   T          
Sbjct: 8   KKSAVSDVGAWAMNVISSVGIIMANKQLMSSSGFGFGFATTLTGFHFAFTALVGMVSNAT 67

Query: 54  ---CSLHVALWMKLFEHKPFDPRAVMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIP 110
               S HV LW  L+            F ++  ISI  +N SL  NSVGFYQ++KL++IP
Sbjct: 68  GLSASKHVPLWELLW------------FSIVANISIAAMNFSLMLNSVGFYQISKLSMIP 115

Query: 111 CTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDLQLNVLGSVLSLLAVLTTCVAQIM 170
              +LE +   K + + ++ S++++++GVGI TVTD+++N  G + +  AV +T + QI 
Sbjct: 116 VVCVLEWILHSKHYCKEVKASVMVVVIGVGICTVTDVKVNAKGFICACTAVFSTSLQQIS 175

Query: 171 TNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSC 230
             ++QKK+ V S +LL ++ P QA++L I GPF+D LL+ K +  ++ T   +F I+LSC
Sbjct: 176 IGSLQKKYSVGSFELLSKTAPIQAISLLICGPFVDYLLSGKFISTYQMTYGAIFCILLSC 235

Query: 231 LISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGM 290
            ++V  N S +L IG+ S  ++QVLGH+KT  VL  G++L     +++NI G+ IA++GM
Sbjct: 236 ALAVFCNISQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSEMTFKNIAGMAIAIVGM 295

Query: 291 VLYSYCCSLESQQKASET 308
           V+YS+   +E Q+ A  T
Sbjct: 296 VIYSWAVDIEKQRNAKST 313

UDP-galactose transporter that transports UDP-galactose, UDP-glucose and GDP-fucose.

Arabidopsis thaliana (taxid: 3702)

>sp|Q1JQ66|S35E3_DANRE Solute carrier family 35 member E3 OS=Danio rerio GN=slc35e3 PE=2 SV=1

 Score =  163 bits (412), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/302 (33%), Positives = 166/302 (54%), Gaps = 3/302 (0%)

Query: 12  VGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFD 71
           +  L ++++SS+ IV  NK +    GF    TLT  H ++T+  L +   M +F  K   
Sbjct: 15  IAGLLVNLLSSICIVFINKWIYVHYGFP-NMTLTLIHFVMTWLGLFICQKMDIFAPKSLR 73

Query: 72  PRAVMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLS 131
           P  ++   +     +   NLSL  N++G YQ+ K+   P  I ++T+++RK FS  I+L+
Sbjct: 74  PSKILLLALSFCGFVVFTNLSLQSNTIGTYQLAKVMTTPVIIAIQTMYYRKTFSTKIKLT 133

Query: 132 LVILLVGVGIATVTDLQLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCP 191
           LV + +GV + +  D++ N++G + + L VL T + Q+     Q + +V+S QLLY   P
Sbjct: 134 LVPITLGVILNSYYDVRFNLMGMIFATLGVLVTSLYQVWVGAKQHELQVNSMQLLYYQAP 193

Query: 192 YQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVIGKTSPVT 251
             +  L ++ PF + L  +  +F   ++   LF ++LS +I+  VN S + +IG TSPVT
Sbjct: 194 MSSAFLLVLVPFFEPLTGDGGIFG-PWSFLALFMVLLSGVIAFLVNLSIYWIIGNTSPVT 252

Query: 252 YQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLESQQKASETSSQ 311
           Y + GH K C+ L  GYVL  DP S    LGIL  + G++ Y++   L  Q++     +Q
Sbjct: 253 YNMFGHFKFCITLLGGYVLFQDPLSLNQGLGILCTLTGILAYTH-FKLAEQEEGKSRLTQ 311

Query: 312 LP 313
            P
Sbjct: 312 RP 313

Putative transporter.

Danio rerio (taxid: 7955)

>sp|Q7Z769|S35E3_HUMAN Solute carrier family 35 member E3 OS=Homo sapiens GN=SLC35E3 PE=2 SV=1

 Score =  144 bits (362), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 157/301 (52%), Gaps = 3/301 (0%)

Query: 13  GALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFDP 72
             L  +++ S+ IV  NK +    GF    +LT  H +VT+  L++   + +F  K   P
Sbjct: 16  AGLLFNLLVSICIVFLNKWIYVYHGFP-NMSLTLVHFVVTWLGLYICQKLDIFAPKSLPP 74

Query: 73  RAVMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSL 132
             ++   +     +   NLSL  N++G YQ+ K    P  I ++T  ++K FS  IQL+L
Sbjct: 75  SRLLLLALSFCGFVVFTNLSLQNNTIGTYQLAKAMTTPVIIAIQTFCYQKTFSTRIQLTL 134

Query: 133 VILLVGVGIATVTDLQLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPY 192
           + + +GV + +  D++ N LG V + L VL T + Q+     Q + +V+S QLLY   P 
Sbjct: 135 IPITLGVILNSYYDVKFNFLGMVFAALGVLVTSLYQVWVGAKQHELQVNSMQLLYYQAPM 194

Query: 193 QALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVIGKTSPVTY 252
            +  L +  PF + +     +F   ++   L  ++LS +I+  VN S + +IG TSPVTY
Sbjct: 195 SSAMLLVAVPFFEPVFGEGGIFG-PWSVSALLMVLLSGVIAFMVNLSIYWIIGNTSPVTY 253

Query: 253 QVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLESQQKASETSSQL 312
            + GH K C+ L  GYVL  DP S    LGIL  + G++ Y++   L  Q+ +    +Q 
Sbjct: 254 NMFGHFKFCITLFGGYVLFKDPLSINQALGILCTLFGILAYTH-FKLSEQEGSRSKLAQR 312

Query: 313 P 313
           P
Sbjct: 313 P 313

Putative transporter.

Homo sapiens (taxid: 9606)

>sp|A4IFK2|S35E3_BOVIN Solute carrier family 35 member E3 OS=Bos taurus GN=SLC35E3 PE=2 SV=1

 Score =  143 bits (361), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 160/301 (53%), Gaps = 3/301 (0%)

Query: 13  GALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFDP 72
             L L+++ S+ IV  NK +    GF    +LT  H +VT+  L+V   + +F  K   P
Sbjct: 16  AGLLLNLLVSICIVFLNKWIYVHYGFP-NMSLTLVHFVVTWLGLYVCQKLDIFAPKSLPP 74

Query: 73  RAVMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSL 132
             ++   +     +   NLSL  N++G YQ+ K    P  I+++TL ++K FS  I+L+L
Sbjct: 75  SKLLLLALSFCGFVVFTNLSLQNNTIGTYQLAKAMTTPVIIVIQTLCYKKTFSTKIRLTL 134

Query: 133 VILLVGVGIATVTDLQLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPY 192
           + + +GV + +  D++ N LG+V + L VL T + Q+     Q + +V+S QLLY   P 
Sbjct: 135 IPITLGVILNSYYDVKFNFLGTVFAALGVLVTSLYQVWVGAKQHELQVNSMQLLYYQAPM 194

Query: 193 QALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVIGKTSPVTY 252
            +  L +  PF + +     +F   ++   L  ++LS +I+  VN S + +IG TSPVTY
Sbjct: 195 SSAMLLVAVPFFEPVFAEGGIFG-PWSVSALLMVLLSGVIAFMVNLSIYWIIGNTSPVTY 253

Query: 253 QVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLESQQKASETSSQL 312
            + GH K C+ L  GYVL  DP S    LG+L  + G++ Y++   L  Q+ +     Q 
Sbjct: 254 NMFGHFKFCITLFGGYVLFKDPLSINQGLGMLCTLFGILAYTH-FKLSEQEGSKSKLVQR 312

Query: 313 P 313
           P
Sbjct: 313 P 313

Putative transporter.

Bos taurus (taxid: 9913)

>sp|Q6PGC7|S35E3_MOUSE Solute carrier family 35 member E3 OS=Mus musculus GN=Slc35e3 PE=2 SV=1

 Score =  141 bits (355), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 94/301 (31%), Positives = 157/301 (52%), Gaps = 3/301 (0%)

Query: 13  GALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFDP 72
             L  +++ S+ IV  NK +    GF    +LT  H +VT+  L++   + +F  K    
Sbjct: 16  AGLLFNLLVSICIVFLNKWIYVHHGFP-NMSLTLVHFVVTWLGLYICQKLNIFAPKSLPL 74

Query: 73  RAVMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSL 132
             ++   +     +   NLSL  N++G YQ+ K    P  I ++T +++K+FS  IQL+L
Sbjct: 75  SKLLLLALSFCGFVVFTNLSLQNNTIGTYQLAKAMTTPVIIAIQTFWYQKRFSVRIQLTL 134

Query: 133 VILLVGVGIATVTDLQLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPY 192
           + + VGV + +  D++ + LG V + L V+ T + Q+     Q + +V+S QLLY   P 
Sbjct: 135 IPITVGVILNSYYDVKFHSLGMVFAALGVVVTSLYQVWVGAKQHELQVNSMQLLYYQAPM 194

Query: 193 QALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVIGKTSPVTY 252
            +  L +  PF + +     +F   ++   L  ++LS +I+  VN S + +IG TSPVTY
Sbjct: 195 SSAMLLVAVPFFEPVFAEGGIFG-PWSVSALLMVLLSGIIAFMVNLSIYWIIGNTSPVTY 253

Query: 253 QVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLESQQKASETSSQL 312
            + GH K C+ L  GY+L  DP S    LGIL  + G++ Y++   L  Q+ +     Q 
Sbjct: 254 NMFGHFKFCITLCGGYILFKDPLSVNQGLGILCTLFGILTYTH-FKLSEQEGSKSKLVQR 312

Query: 313 P 313
           P
Sbjct: 313 P 313

Putative transporter.

Mus musculus (taxid: 10090)

>sp|Q9C521|UGAL1_ARATH UDP-galactose transporter 1 OS=Arabidopsis thaliana GN=UDP-GALT1 PE=2 SV=1

 Score =  112 bits (280), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 158/323 (48%), Gaps = 18/323 (5%)

Query: 22  SVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPF---DP----RA 74
           +V+++I NK +   L F F  +++  H + +    ++ +  K+ + KP    DP    R 
Sbjct: 20  NVTVIIMNKWIFQKLDFKFPLSVSCVHFICSSIGAYIVI--KVLKLKPLIVVDPEDRWRR 77

Query: 75  VMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVI 134
           +     +  I+I L N+SL +  V F Q  K      T++L+ L +RK F   I  SLV 
Sbjct: 78  IFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVP 137

Query: 135 LLVGVGIATVTDLQLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQA 194
           ++ G+ + +VT+L  N+ G   +L   L T    I+  ++   +K  S   +Y   P+  
Sbjct: 138 IVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHGYKFDSINTVYYMAPFAT 197

Query: 195 LTLFIIGPFLD--GLLTNKNVFAFKYTPYVLFFIVLSC-LISVSVNFSTFLVIGKTSPVT 251
           + L I    L+  G+L+    F     P+    I+LS  +++  +NFS F VI  T+ VT
Sbjct: 198 MILGIPALLLEGSGILS---WFEAHPAPWSALIIILSSGVLAFCLNFSIFYVIHSTTAVT 254

Query: 252 YQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLESQQ-KASETSS 310
           + V G+LK  + +   +++  +P S+ N +G  I ++G   Y Y   + SQQ   +  + 
Sbjct: 255 FNVAGNLKVAVAVMVSWLIFRNPISYMNAVGCGITLVGCTFYGYVRHMLSQQTPGTPRTP 314

Query: 311 QLPQVVKEGETDPLINAEKGTGD 333
           + P+   + E  PL+N +K  G 
Sbjct: 315 RTPR--SKMELLPLVNNDKLEGK 335

UDP-galactose transporter that transports UDP-galactose, UDP-glucose and GDP-fucose.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SFE9|GONS5_ARATH GDP-mannose transporter GONST5 OS=Arabidopsis thaliana GN=GONST5 PE=2 SV=1

 Score =  108 bits (270), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 166/345 (48%), Gaps = 26/345 (7%)

Query: 1   MSEGQKFQLGTVGALSLSVIS----SVSIVICNKALISSLGFTFATTLTSWHLLVTFCSL 56
           M EG  ++  T+    LS++     +V+++I NK +   L F F  +++  H + +    
Sbjct: 1   MEEGSLWRQWTMFRSLLSILQWWGFNVTVIIMNKWIFQKLDFKFPLSVSCVHFICSSIGA 60

Query: 57  HVALWMKLFEHKPF---DP----RAVMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAII 109
           ++ +  K+ + KP    DP    R +     +  I+I L N+SL +  V F Q  K    
Sbjct: 61  YIVI--KVLKLKPLIVVDPEDRWRRIFPMSFVFCINIVLGNISLRYIPVSFMQTIKSLTP 118

Query: 110 PCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDLQLNVLGSVLSLLAVLTTCVAQI 169
             T++L+ L +RK F   I  SLV ++ G+ + ++T+L  NV G   +L   L T    I
Sbjct: 119 ATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSITELSFNVFGFCAALFGCLATSTKTI 178

Query: 170 MTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKN----VFAFKYTPYVLFF 225
           +  ++   +K  S   +Y   P+  +   I+G  L   L  +N     F    +P+    
Sbjct: 179 LAESLLHGYKFDSINTVYYMAPFATM---ILG--LPAFLLERNGILDWFEAHPSPWSALI 233

Query: 226 IVL-SCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGIL 284
           I+  S +++  +NFS F VI  T+ VT+ V G+LK  + +   +++  +P S  N +G  
Sbjct: 234 ILFNSGVLAFCLNFSIFYVIQSTTAVTFNVAGNLKVAVAVFVSWMIFRNPISPMNAVGCG 293

Query: 285 IAVIGMVLYSYCCSLESQQK-ASETSSQLPQVVKEGETDPLINAE 328
           I ++G   Y Y   + SQQ+  +  + + P+   + E  PL+N +
Sbjct: 294 ITLVGCTFYGYVRHMLSQQQPGTPRTPRTPR--NKMELIPLVNDK 336

GDP-mannose transporter that may be involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Arabidopsis thaliana (taxid: 3702)

>sp|Q3E6T0|PT525_ARATH Probable sugar phosphate/phosphate translocator At5g25400 OS=Arabidopsis thaliana GN=At5g25400 PE=2 SV=1

 Score = 82.0 bits (201), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 88/333 (26%), Positives = 160/333 (48%), Gaps = 29/333 (8%)

Query: 22  SVSIVICNKALISS--LGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFDP------- 72
           S ++++ NK ++      + F  +LT  H+  +FCS    L +K+F  K  +P       
Sbjct: 29  SFTVIVYNKYILDKKMYDWPFPISLTMIHM--SFCSTLAFLLIKVF--KFVEPVSMSRDT 84

Query: 73  --RAVMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTIL-LETLFFRKKFSRNIQ 129
             R+V+  G L  +S+ L N +  + SV F QM K A++P  +  +  LF ++ F     
Sbjct: 85  YLRSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLK-ALMPVAVYSIGVLFKKEGFKSETM 143

Query: 130 LSLVILLVGVGIATVTDLQLNVLGSVLSLLAVLTTCVAQIMTNTI--QKKFKVSSTQLLY 187
           ++++ +  GV IA   + + +V G +L L AV       +M   +   K   ++    LY
Sbjct: 144 MNMLSISFGVAIAAYGEARFDVWGVILQLGAVAFEATRLVMIQILLTSKGITLNPITSLY 203

Query: 188 QSCPYQALTLFIIGPFLD-GLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVIGK 246
              P     LFI    ++  +L + + F F Y   ++F     C  + ++N + FL++GK
Sbjct: 204 YVAPCCLAFLFIPWIVVEFPILRDTSSFHFDY---LIFGTNSFC--AFALNLAVFLLVGK 258

Query: 247 TSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLESQQKAS 306
           TS +T  V G +K  L++AF + ++ D  +  N+ G  IA +G+  Y++      + K +
Sbjct: 259 TSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGIAFLGVAYYNHAKLQALKAKEA 318

Query: 307 ETSSQLPQVVKEGETDPLINAEKGTGDGVAKAP 339
           + ++Q  QV  + ET  L+   +G   G    P
Sbjct: 319 QKTAQ--QV--DEETGRLLEEREGNEGGRKNEP 347

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LFN3|PT511_ARATH Probable sugar phosphate/phosphate translocator At5g11230 OS=Arabidopsis thaliana GN=At5g11230 PE=2 SV=1

 Score = 82.0 bits (201), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 91/362 (25%), Positives = 169/362 (46%), Gaps = 50/362 (13%)

Query: 9   LGTVGALSLSVISSV---------------SIVICNKALISS--LGFTFATTLTSWHLLV 51
           +G  GALS SVI ++               ++++ NK ++      + F  +LT  H+  
Sbjct: 1   MGKGGALSESVIKNIVLSYSYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHM-- 58

Query: 52  TFCSLHVALWMKLFEHKPFDP---------RAVMGFGVLNGISIGLLNLSLGFNSVGFYQ 102
           +FCS    L +K+F  K  +P         R+V+  G L  +S+ L N +  + SV F Q
Sbjct: 59  SFCSTLAFLIIKVF--KFVEPVKMTRETYLRSVVPIGALYALSLWLSNSAYIYLSVSFIQ 116

Query: 103 MTKLAIIPCTIL-LETLFFRKKFSRNIQLSLVILLVGVGIATVTDLQLNVLGSVLSLLAV 161
           M K A++P  +  +  LF ++ F  +  ++++ +  GV IA   + + +V G +L L AV
Sbjct: 117 MLK-ALMPVAVYSIGVLFKKEGFKSDTMMNMLSISFGVAIAAYGEARFDVWGVILQLGAV 175

Query: 162 LTTCVAQIMTNTI--QKKFKVSSTQLLYQSCPYQALTLFIIGPFLD-GLLTNKNVFAFKY 218
                  ++   +   K  K++    LY   P     LFI   +++  +L + + F   Y
Sbjct: 176 AFEATRLVLIQILLGDKGIKLNPITSLYYVAPCCLAFLFIPWIYVEFPVLRDTSSFHLDY 235

Query: 219 TPYVLFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWR 278
             +       +   + ++N + FL++GKTS +T  V G +K  L++AF + ++ D  +  
Sbjct: 236 AIFGA-----NSFCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPI 290

Query: 279 NILGILIAVIGMVLYSYC---------CSLESQQKASETSSQLPQVVKEGETDPLINAEK 329
           N+ G  IA +G+  Y++             +  Q+A E S +L +  +EG+ +   N + 
Sbjct: 291 NLFGYGIAFLGVAYYNHAKLQALKAKEEEKKKIQQADEESGRLLE-EREGDVEGKKNDQS 349

Query: 330 GT 331
           G 
Sbjct: 350 GN 351

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	349
255554489	369	UDP-glucuronic acid/UDP-N-acetylgalactos	0.997	0.943	0.900	1e-173
118483005	353	unknown [Populus trichocarpa] gi|1184890	0.997	0.985	0.887	1e-170
224145447	353	predicted protein [Populus trichocarpa]	0.997	0.985	0.884	1e-169
22329373	357	nodulin MtN21 /EamA-like transporter pro	0.997	0.974	0.863	1e-168
297848964	357	hypothetical protein ARALYDRAFT_470711 [	0.997	0.974	0.863	1e-168
238479401	353	Nucleotide/sugar transporter family prot	0.997	0.985	0.850	1e-164
334182354	353	nodulin MtN21 /EamA-like transporter pro	0.948	0.937	0.897	1e-163
297826457	353	hypothetical protein ARALYDRAFT_320800 [	0.997	0.985	0.850	1e-163
449439189	353	PREDICTED: uncharacterized membrane prot	1.0	0.988	0.855	1e-162
225448689	353	PREDICTED: uncharacterized membrane prot	1.0	0.988	0.849	1e-160

>gi|255554489|ref|XP_002518283.1| UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter, putative [Ricinus communis] gi|223542503|gb|EEF44043.1| UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter, putative [Ricinus communis]

 Score =  613 bits (1580), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 318/353 (90%), Positives = 335/353 (94%), Gaps = 5/353 (1%)

Query: 1   MSEGQKFQLGTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVAL 60
           MSE Q+FQLGTVGALSLSV+SSVSIVICNKALIS+LGFTFATTLTSWHLLVTFCSLHVAL
Sbjct: 18  MSESQRFQLGTVGALSLSVVSSVSIVICNKALISTLGFTFATTLTSWHLLVTFCSLHVAL 77

Query: 61  WMKLFEHKPFDPRAVMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFF 120
           WMK+FEHKPFD RAVMGFG+LNGISIGLLNLSLGFNSVGFYQMTKLAIIPCT+LLETLFF
Sbjct: 78  WMKMFEHKPFDARAVMGFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVLLETLFF 137

Query: 121 RKKFSRNIQLSLVILLVGVGIATVTDLQLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKV 180
           RKKFSRNIQ SL ILL+GVGIATVTDLQLNVLGSVLSLLAV+TTC+AQIMTNTIQKKFKV
Sbjct: 138 RKKFSRNIQFSLTILLLGVGIATVTDLQLNVLGSVLSLLAVVTTCIAQIMTNTIQKKFKV 197

Query: 181 SSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFST 240
           SSTQLLYQSCPYQA+TLFIIGPFLDGLLTN NVFAFKYTP VLFFIVLSCLISVSVNFST
Sbjct: 198 SSTQLLYQSCPYQAITLFIIGPFLDGLLTNLNVFAFKYTPQVLFFIVLSCLISVSVNFST 257

Query: 241 FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLE 300
           FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLL DPFSWRNILGILIAVIGMVLYSYCC++E
Sbjct: 258 FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLRDPFSWRNILGILIAVIGMVLYSYCCTVE 317

Query: 301 SQQKASETSSQLPQVVKEGETDPLINAEKGTG---DGVA-KAPAWNSNKDLHA 349
           +QQKASETS +LP+ VKEGE+DPLI  E G+G   DGV  KAP WNSNKDLHA
Sbjct: 318 NQQKASETSVKLPE-VKEGESDPLIGVENGSGILADGVVPKAPVWNSNKDLHA 369

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118483005|gb|ABK93414.1| unknown [Populus trichocarpa] gi|118489025|gb|ABK96320.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  602 bits (1552), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 314/354 (88%), Positives = 333/354 (94%), Gaps = 6/354 (1%)

Query: 1   MSEGQKFQLGTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVAL 60
           MSEGQKFQLGTVGALSLSV+SSVSIVICNKALIS+LGFTFATTLTSWHLLVTFCSLH+AL
Sbjct: 1   MSEGQKFQLGTVGALSLSVVSSVSIVICNKALISTLGFTFATTLTSWHLLVTFCSLHMAL 60

Query: 61  WMKLFEHKPFDPRAVMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFF 120
           WMKLFEHKPFD RAVMGFG+LNGISIGLLNLSLGFNSVGFYQMTKLAIIPCT+LLETLFF
Sbjct: 61  WMKLFEHKPFDARAVMGFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVLLETLFF 120

Query: 121 RKKFSRNIQLSLVILLVGVGIATVTDLQLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKV 180
           RK+FSR+IQLSL ILL+GVGIATVTDLQLNVLGS+LSLLAVLTTCVAQIMTNTIQKKF+V
Sbjct: 121 RKQFSRSIQLSLTILLMGVGIATVTDLQLNVLGSILSLLAVLTTCVAQIMTNTIQKKFRV 180

Query: 181 SSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFST 240
           SSTQLLYQSCPYQALTLFI+GPFLDGLLTNKNV AFKYTP VLFFIVLSCLISVSVNFST
Sbjct: 181 SSTQLLYQSCPYQALTLFIVGPFLDGLLTNKNVLAFKYTPLVLFFIVLSCLISVSVNFST 240

Query: 241 FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLE 300
           FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLL DPFSWRNILGILIAV+GMVLYSYCC+LE
Sbjct: 241 FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLRDPFSWRNILGILIAVVGMVLYSYCCTLE 300

Query: 301 SQQKASETSSQLPQVVKEGETDPLINAEKGTG----DGVAK-APAWNSNKDLHA 349
           +QQK +E  ++LP+ VKE ETDPLI+AE GTG     GV K  P WNSNKDL A
Sbjct: 301 NQQKQNEAPAKLPE-VKESETDPLISAENGTGILADGGVPKVVPLWNSNKDLDA 353

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224145447|ref|XP_002325646.1| predicted protein [Populus trichocarpa] gi|222862521|gb|EEF00028.1| predicted protein [Populus trichocarpa]

 Score =  600 bits (1548), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 313/354 (88%), Positives = 332/354 (93%), Gaps = 6/354 (1%)

Query: 1   MSEGQKFQLGTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVAL 60
           MSEGQKFQLGTVGALSLSV+SSVSIVICNKALIS+LGFTFATTLTSWHLLVTFCSLH+AL
Sbjct: 1   MSEGQKFQLGTVGALSLSVVSSVSIVICNKALISTLGFTFATTLTSWHLLVTFCSLHMAL 60

Query: 61  WMKLFEHKPFDPRAVMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFF 120
           WMKLFEHKPFD RAVMGFG+LNGISIGLLNLSLGFNSVGFYQMTKLAIIPCT+LLETLFF
Sbjct: 61  WMKLFEHKPFDARAVMGFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVLLETLFF 120

Query: 121 RKKFSRNIQLSLVILLVGVGIATVTDLQLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKV 180
           RK+FSR+IQLSL ILL+GVGIATVTDLQLNVLGS+LSLLAVLTTCVAQIMTNTIQKKF+V
Sbjct: 121 RKQFSRSIQLSLTILLMGVGIATVTDLQLNVLGSILSLLAVLTTCVAQIMTNTIQKKFRV 180

Query: 181 SSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFST 240
           SSTQLLYQSCPYQALTLFI+GPFLDGLLTNKNV AFKYTP VLFFIVLSCLISVSVNFST
Sbjct: 181 SSTQLLYQSCPYQALTLFIVGPFLDGLLTNKNVLAFKYTPLVLFFIVLSCLISVSVNFST 240

Query: 241 FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLE 300
           FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLL DPFSWRNILGILIAV+GMVLYSYCC+LE
Sbjct: 241 FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLRDPFSWRNILGILIAVVGMVLYSYCCTLE 300

Query: 301 SQQKASETSSQLPQVVKEGETDPLINAEKGTG---DGVAK--APAWNSNKDLHA 349
           +QQK +E  ++LP+ VKE ETDPLI+AE GTG   DG      P WNSNKDL A
Sbjct: 301 NQQKQNEAPAKLPE-VKESETDPLISAENGTGILADGGVPNVVPLWNSNKDLDA 353

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22329373|ref|NP_172172.2| nodulin MtN21 /EamA-like transporter protein [Arabidopsis thaliana] gi|145323764|ref|NP_001077471.1| nodulin MtN21 /EamA-like transporter protein [Arabidopsis thaliana] gi|75158873|sp|Q8RXL8.1|Y1689_ARATH RecName: Full=Uncharacterized membrane protein At1g06890 gi|19423946|gb|AAL87295.1| unknown protein [Arabidopsis thaliana] gi|21436373|gb|AAM51356.1| unknown protein [Arabidopsis thaliana] gi|332189927|gb|AEE28048.1| nodulin MtN21 /EamA-like transporter protein [Arabidopsis thaliana] gi|332189928|gb|AEE28049.1| nodulin MtN21 /EamA-like transporter protein [Arabidopsis thaliana]

 Score =  595 bits (1535), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 309/358 (86%), Positives = 330/358 (92%), Gaps = 10/358 (2%)

Query: 1   MSEGQKFQLGTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVAL 60
           MSEGQKFQLGT+GALSLSV+SSVSIVICNKALIS+LGFTFATTLTSWHLLVTFCSLHVAL
Sbjct: 1   MSEGQKFQLGTIGALSLSVVSSVSIVICNKALISTLGFTFATTLTSWHLLVTFCSLHVAL 60

Query: 61  WMKLFEHKPFDPRAVMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFF 120
           WMK+FEHKPFDPRAVMGFG+LNGISIGLLNLSLGFNSVGFYQMTKLAIIPCT+LLETLFF
Sbjct: 61  WMKMFEHKPFDPRAVMGFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVLLETLFF 120

Query: 121 RKKFSRNIQLSLVILLVGVGIATVTDLQLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKV 180
           RKKFSR IQ SL ILL+GVGIATVTDLQLN+LGSVLSLLAV+TTCVAQIMTNTIQKKFKV
Sbjct: 121 RKKFSRKIQFSLTILLLGVGIATVTDLQLNMLGSVLSLLAVVTTCVAQIMTNTIQKKFKV 180

Query: 181 SSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFST 240
           SSTQLLYQSCPYQA+TLF+ GPFLDGLLTN+NVFAFKYT  V+FFIVLSCLISVSVNFST
Sbjct: 181 SSTQLLYQSCPYQAITLFVTGPFLDGLLTNQNVFAFKYTSQVVFFIVLSCLISVSVNFST 240

Query: 241 FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLE 300
           FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLL DPF WRNILGIL+AVIGMV+YSY CS+E
Sbjct: 241 FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLRDPFDWRNILGILVAVIGMVVYSYYCSIE 300

Query: 301 SQQKASETSSQLPQVVKEGETDPLINAEKGT------GDGVAK---APAWNSNKDLHA 349
           +QQKASETS+QLPQ +KE E DPLI AE G+      G GV +   AP WNSNKD  A
Sbjct: 301 TQQKASETSTQLPQ-MKESEKDPLIAAENGSGVLSDGGGGVQQKTVAPVWNSNKDFQA 357

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297848964|ref|XP_002892363.1| hypothetical protein ARALYDRAFT_470711 [Arabidopsis lyrata subsp. lyrata] gi|297338205|gb|EFH68622.1| hypothetical protein ARALYDRAFT_470711 [Arabidopsis lyrata subsp. lyrata]

 Score =  595 bits (1534), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 309/358 (86%), Positives = 330/358 (92%), Gaps = 10/358 (2%)

Query: 1   MSEGQKFQLGTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVAL 60
           MSEGQKFQLGT+GALSLSV+SSVSIVICNKALIS+LGFTFATTLTSWHLLVTFCSLHVAL
Sbjct: 1   MSEGQKFQLGTIGALSLSVVSSVSIVICNKALISTLGFTFATTLTSWHLLVTFCSLHVAL 60

Query: 61  WMKLFEHKPFDPRAVMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFF 120
           WMK+FEHKPFDPRAVMGFG+LNGISIGLLNLSLGFNSVGFYQMTKLAIIPCT+LLETLFF
Sbjct: 61  WMKMFEHKPFDPRAVMGFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVLLETLFF 120

Query: 121 RKKFSRNIQLSLVILLVGVGIATVTDLQLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKV 180
           RKKFSR IQ SL ILL+GVGIATVTDLQLN+LGSVLSLLAV+TTCVAQIMTNTIQKKFKV
Sbjct: 121 RKKFSRKIQFSLTILLLGVGIATVTDLQLNMLGSVLSLLAVVTTCVAQIMTNTIQKKFKV 180

Query: 181 SSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFST 240
           SSTQLLYQSCPYQA+TLF+ GPFLDGLLTN+NVFAFKYT  V+FFIVLSCLISVSVNFST
Sbjct: 181 SSTQLLYQSCPYQAITLFVTGPFLDGLLTNQNVFAFKYTSQVVFFIVLSCLISVSVNFST 240

Query: 241 FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLE 300
           FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLL DPF WRNILGIL+AVIGMV+YSY CS+E
Sbjct: 241 FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLRDPFDWRNILGILVAVIGMVVYSYYCSIE 300

Query: 301 SQQKASETSSQLPQVVKEGETDPLINAEKGT------GDGVAK---APAWNSNKDLHA 349
           +QQKASETS+QLPQ +KE E DPLI AE G+      G GV +   AP WNSNKD  A
Sbjct: 301 TQQKASETSTQLPQ-MKESENDPLIAAENGSGVLSDGGGGVQQKTVAPVWNSNKDFQA 357

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|238479401|ref|NP_001154542.1| Nucleotide/sugar transporter family protein [Arabidopsis thaliana] gi|240254554|ref|NP_180604.4| Nucleotide/sugar transporter family protein [Arabidopsis thaliana] gi|27311731|gb|AAO00831.1| putative integral membrane protein [Arabidopsis thaliana] gi|30984584|gb|AAP42755.1| At2g30460 [Arabidopsis thaliana] gi|51970474|dbj|BAD43929.1| integral membrane protein -like [Arabidopsis thaliana] gi|51970498|dbj|BAD43941.1| integral membrane protein -like [Arabidopsis thaliana] gi|51970690|dbj|BAD44037.1| integral membrane protein -like [Arabidopsis thaliana] gi|62319792|dbj|BAD93797.1| integral membrane protein -like [Arabidopsis thaliana] gi|330253296|gb|AEC08390.1| Nucleotide/sugar transporter family protein [Arabidopsis thaliana] gi|330253297|gb|AEC08391.1| Nucleotide/sugar transporter family protein [Arabidopsis thaliana]

 Score =  583 bits (1503), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 301/354 (85%), Positives = 328/354 (92%), Gaps = 6/354 (1%)

Query: 1   MSEGQKFQLGTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVAL 60
           MS+ QKFQLGT+GALSLSV+SSVSIVICNKALIS+LGFTFATTLTSWHLLVTFCSLHVAL
Sbjct: 1   MSDAQKFQLGTIGALSLSVVSSVSIVICNKALISTLGFTFATTLTSWHLLVTFCSLHVAL 60

Query: 61  WMKLFEHKPFDPRAVMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFF 120
           WMK FEHKPFDPRAV+GFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCT++LET+FF
Sbjct: 61  WMKFFEHKPFDPRAVLGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVVLETIFF 120

Query: 121 RKKFSRNIQLSLVILLVGVGIATVTDLQLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKV 180
           RK FSR IQ SLVILL+GVGIATVTDLQLN+LGSVLSLLAV+TTCVAQIMTNTIQKK+KV
Sbjct: 121 RKMFSRKIQFSLVILLLGVGIATVTDLQLNMLGSVLSLLAVITTCVAQIMTNTIQKKYKV 180

Query: 181 SSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFST 240
           SSTQLLYQSCPYQA+TLF+ GPFLDGLLTN+NVFAFKYT  V+FFIVLSCLISVSVNFST
Sbjct: 181 SSTQLLYQSCPYQAITLFVTGPFLDGLLTNQNVFAFKYTSQVVFFIVLSCLISVSVNFST 240

Query: 241 FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLE 300
           FLVIGKTSPVTYQVLGHLKTCLVLAFGY+LL D FSWRNILGIL+AVIGMVLYSY C+LE
Sbjct: 241 FLVIGKTSPVTYQVLGHLKTCLVLAFGYLLLKDAFSWRNILGILVAVIGMVLYSYYCTLE 300

Query: 301 SQQKASETSSQLPQVVKEGETDPLINAEKGTG----DGVAKA-PAWNSNKDLHA 349
           +QQKA+ETS+QLPQ + E E DPL++AE G+G    +GV K  P WNSNKD  A
Sbjct: 301 TQQKATETSTQLPQ-MDENEKDPLVSAENGSGLISDNGVQKQDPVWNSNKDFQA 353

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|334182354|ref|NP_001184926.1| nodulin MtN21 /EamA-like transporter protein [Arabidopsis thaliana] gi|332189929|gb|AEE28050.1| nodulin MtN21 /EamA-like transporter protein [Arabidopsis thaliana]

 Score =  582 bits (1499), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 298/332 (89%), Positives = 318/332 (95%), Gaps = 1/332 (0%)

Query: 1   MSEGQKFQLGTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVAL 60
           MSEGQKFQLGT+GALSLSV+SSVSIVICNKALIS+LGFTFATTLTSWHLLVTFCSLHVAL
Sbjct: 1   MSEGQKFQLGTIGALSLSVVSSVSIVICNKALISTLGFTFATTLTSWHLLVTFCSLHVAL 60

Query: 61  WMKLFEHKPFDPRAVMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFF 120
           WMK+FEHKPFDPRAVMGFG+LNGISIGLLNLSLGFNSVGFYQMTKLAIIPCT+LLETLFF
Sbjct: 61  WMKMFEHKPFDPRAVMGFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVLLETLFF 120

Query: 121 RKKFSRNIQLSLVILLVGVGIATVTDLQLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKV 180
           RKKFSR IQ SL ILL+GVGIATVTDLQLN+LGSVLSLLAV+TTCVAQIMTNTIQKKFKV
Sbjct: 121 RKKFSRKIQFSLTILLLGVGIATVTDLQLNMLGSVLSLLAVVTTCVAQIMTNTIQKKFKV 180

Query: 181 SSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFST 240
           SSTQLLYQSCPYQA+TLF+ GPFLDGLLTN+NVFAFKYT  V+FFIVLSCLISVSVNFST
Sbjct: 181 SSTQLLYQSCPYQAITLFVTGPFLDGLLTNQNVFAFKYTSQVVFFIVLSCLISVSVNFST 240

Query: 241 FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLE 300
           FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLL DPF WRNILGIL+AVIGMV+YSY CS+E
Sbjct: 241 FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLRDPFDWRNILGILVAVIGMVVYSYYCSIE 300

Query: 301 SQQKASETSSQLPQVVKEGETDPLINAEKGTG 332
           +QQKASETS+QLPQ +KE E DPLI AE G+G
Sbjct: 301 TQQKASETSTQLPQ-MKESEKDPLIAAENGSG 331

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297826457|ref|XP_002881111.1| hypothetical protein ARALYDRAFT_320800 [Arabidopsis lyrata subsp. lyrata] gi|297326950|gb|EFH57370.1| hypothetical protein ARALYDRAFT_320800 [Arabidopsis lyrata subsp. lyrata]

 Score =  580 bits (1495), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 301/354 (85%), Positives = 327/354 (92%), Gaps = 6/354 (1%)

Query: 1   MSEGQKFQLGTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVAL 60
           MSE  KFQLGT+GALSLSV+SSVSIVICNKALIS+LGFTFATTLTSWHLLVTFCSLHVAL
Sbjct: 1   MSESHKFQLGTIGALSLSVVSSVSIVICNKALISTLGFTFATTLTSWHLLVTFCSLHVAL 60

Query: 61  WMKLFEHKPFDPRAVMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFF 120
           WMK FEH+PFDPRAV+GFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCT++LET+FF
Sbjct: 61  WMKFFEHQPFDPRAVLGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVVLETIFF 120

Query: 121 RKKFSRNIQLSLVILLVGVGIATVTDLQLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKV 180
           RKKFSR IQ SLVILL+GVGIATVTDLQLN+LGSVLSLLAV+TTCVAQIMTNTIQKK+KV
Sbjct: 121 RKKFSRKIQFSLVILLLGVGIATVTDLQLNMLGSVLSLLAVITTCVAQIMTNTIQKKYKV 180

Query: 181 SSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFST 240
           SSTQLLYQSCPYQA+TLF+ GPFLDGLLTN+NVFAFKYT  V+FFIVLSCLISVSVNFST
Sbjct: 181 SSTQLLYQSCPYQAITLFVTGPFLDGLLTNQNVFAFKYTSQVVFFIVLSCLISVSVNFST 240

Query: 241 FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLE 300
           FLVIGKTSPVTYQVLGHLKTCLVLAFGY+LL D FSWRNILGIL+AVIGMVLYSY C+LE
Sbjct: 241 FLVIGKTSPVTYQVLGHLKTCLVLAFGYLLLKDAFSWRNILGILVAVIGMVLYSYYCTLE 300

Query: 301 SQQKASETSSQLPQVVKEGETDPLINAEKGTG----DGVAKA-PAWNSNKDLHA 349
           +QQKA+ETS+QLPQ + E E DPLI+ E G+G    + V KA P WNSNKD  A
Sbjct: 301 TQQKAAETSTQLPQ-MDENEKDPLISVENGSGLISDNVVPKADPVWNSNKDFQA 353

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449439189|ref|XP_004137369.1| PREDICTED: uncharacterized membrane protein At1g06890-like [Cucumis sativus] gi|449519480|ref|XP_004166763.1| PREDICTED: uncharacterized membrane protein At1g06890-like [Cucumis sativus]

 Score =  576 bits (1484), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 302/353 (85%), Positives = 322/353 (91%), Gaps = 4/353 (1%)

Query: 1   MSEGQKFQLGTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVAL 60
           MS+ QKFQLGT+GALSLSV+SSVSIVICNKALIS+LGFTFATTLTSWHLLVTFCSLHVAL
Sbjct: 1   MSDSQKFQLGTIGALSLSVVSSVSIVICNKALISTLGFTFATTLTSWHLLVTFCSLHVAL 60

Query: 61  WMKLFEHKPFDPRAVMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFF 120
            MKLFEHKPFD RAVMGFG+LNGISIGLLNLSLGFNSVGFYQMTKLAIIPCT+LLETLFF
Sbjct: 61  LMKLFEHKPFDARAVMGFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVLLETLFF 120

Query: 121 RKKFSRNIQLSLVILLVGVGIATVTDLQLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKV 180
           RK FS++IQ SL+ILL+GVGIATVTDLQLN LGS LSLLAVLTTCVAQIMTNTIQKKFKV
Sbjct: 121 RKMFSKSIQFSLMILLLGVGIATVTDLQLNALGSFLSLLAVLTTCVAQIMTNTIQKKFKV 180

Query: 181 SSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFST 240
           SSTQLLYQSCPYQALTLFI GPFLD  LT+ NVFAFKYTP VLFFIVLSCLISVSVNFST
Sbjct: 181 SSTQLLYQSCPYQALTLFIAGPFLDWCLTDLNVFAFKYTPQVLFFIVLSCLISVSVNFST 240

Query: 241 FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLE 300
           FLVIGKTS VTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGIL+A++GMVLYSY C+LE
Sbjct: 241 FLVIGKTSAVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILVAIVGMVLYSYYCTLE 300

Query: 301 SQQKASETSSQLPQVVKEGETDPLINAEKGT---GDGVA-KAPAWNSNKDLHA 349
           SQQK++E SS      KE E+DPLI+ E G    GD V  KAPAW+SNKDLHA
Sbjct: 301 SQQKSNEVSSAQLSQAKENESDPLISVENGAAILGDSVGPKAPAWSSNKDLHA 353

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225448689|ref|XP_002280469.1| PREDICTED: uncharacterized membrane protein At1g06890 [Vitis vinifera] gi|297736487|emb|CBI25358.3| unnamed protein product [Vitis vinifera]

 Score =  570 bits (1468), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 300/353 (84%), Positives = 321/353 (90%), Gaps = 4/353 (1%)

Query: 1   MSEGQKFQLGTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVAL 60
           MSE + F+LGT+GALSLSV+SSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVAL
Sbjct: 1   MSENKGFELGTIGALSLSVVSSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVAL 60

Query: 61  WMKLFEHKPFDPRAVMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFF 120
           WMKLFEHKPFD +AVMGFG+LNGISIGLLNLSLGFNSVGFYQMTKLAIIPCT+LLETLFF
Sbjct: 61  WMKLFEHKPFDAKAVMGFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVLLETLFF 120

Query: 121 RKKFSRNIQLSLVILLVGVGIATVTDLQLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKV 180
           RKKFSR+IQL+L ILL+GVGIATVTDLQLN LGS+LS+LAV+TTC+AQIMTNTIQKKFKV
Sbjct: 121 RKKFSRSIQLALSILLMGVGIATVTDLQLNALGSILSVLAVITTCIAQIMTNTIQKKFKV 180

Query: 181 SSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFST 240
           SSTQLLYQSCPYQALTLFI GPFLD  LT++NVFAFKYTP VL FIVLSCLISVSVNFST
Sbjct: 181 SSTQLLYQSCPYQALTLFISGPFLDWFLTSQNVFAFKYTPQVLVFIVLSCLISVSVNFST 240

Query: 241 FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLE 300
           FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIA++GMVLYSY C+ E
Sbjct: 241 FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIALVGMVLYSYYCTRE 300

Query: 301 SQQKASETSSQLPQVVKEGETDPLINAEKGTG----DGVAKAPAWNSNKDLHA 349
            QQK SE S+Q     KEGE DPLIN E  TG      V KAP W+SNKDLHA
Sbjct: 301 GQQKTSEASAQSSSQAKEGEADPLINIENETGILTDAAVPKAPVWSSNKDLHA 353

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	349
TAIR|locus:2033097	357	AT1G06890 [Arabidopsis thalian	0.997	0.974	0.715	2.2e-128
TAIR|locus:2064316	353	AT2G30460 "AT2G30460" [Arabido	0.997	0.985	0.692	7e-125
TAIR|locus:504955965	342	AT2G28315 [Arabidopsis thalian	0.934	0.953	0.542	6.7e-88
TAIR|locus:2030076	347	AT1G76670 [Arabidopsis thalian	0.865	0.870	0.321	6.1e-39
TAIR|locus:2199557	348	AT1G21070 [Arabidopsis thalian	0.865	0.867	0.311	7.8e-39
TAIR|locus:2118514	335	AT4G09810 [Arabidopsis thalian	0.833	0.868	0.337	4.3e-38
TAIR|locus:2122467	337	NST-K1 "nucleotide sugar trans	0.842	0.872	0.315	5.5e-38
TAIR|locus:2162271	350	AT5G42420 [Arabidopsis thalian	0.779	0.777	0.312	1.9e-37
TAIR|locus:2009076	335	AT1G34020 [Arabidopsis thalian	0.767	0.8	0.329	9.2e-36
ZFIN|ZDB-GENE-041210-186	317	slc35e3 "solute carrier family	0.808	0.889	0.280	9.1e-29

TAIR|locus:2033097 AT1G06890 [Arabidopsis thaliana (taxid:3702)]

 Score = 1260 (448.6 bits), Expect = 2.2e-128, P = 2.2e-128
 Identities = 256/358 (71%), Positives = 272/358 (75%)

Query:     1 MSEGQKFQLGTVGAXXXXXXXXXXXXXCNKALISSLGFTFATTLTSWHLLVTFCSLHVAL 60
             MSEGQKFQLGT+GA             CNKALIS+LGFTFATTLTSWHLLVTFCSLHVAL
Sbjct:     1 MSEGQKFQLGTIGALSLSVVSSVSIVICNKALISTLGFTFATTLTSWHLLVTFCSLHVAL 60

Query:    61 WMKLFEHKPFDPRAVMGFXXXXXXXXXXXXXXXXXXXXXFYQMTKLAIIPCTILLETLFF 120
             WMK+FEHKPFDPRAVMGF                     FYQMTKLAIIPCT+LLETLFF
Sbjct:    61 WMKMFEHKPFDPRAVMGFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVLLETLFF 120

Query:   121 RKKFSRNIQLSXXXXXXXXXXATVTDXXXXXXXXXXXXXXXXTTCVAQIMTNTIQKKFKV 180
             RKKFSR IQ S          ATVTD                TTCVAQIMTNTIQKKFKV
Sbjct:   121 RKKFSRKIQFSLTILLLGVGIATVTDLQLNMLGSVLSLLAVVTTCVAQIMTNTIQKKFKV 180

Query:   181 SSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFST 240
             SSTQLLYQSCPYQA+TLF+ GPFLDGLLTN+NVFAFKYT  V+FFIVLSCLISVSVNFST
Sbjct:   181 SSTQLLYQSCPYQAITLFVTGPFLDGLLTNQNVFAFKYTSQVVFFIVLSCLISVSVNFST 240

Query:   241 FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLE 300
             FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLL DPF WRNILGIL+AVIGMV+YSY CS+E
Sbjct:   241 FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLRDPFDWRNILGILVAVIGMVVYSYYCSIE 300

Query:   301 SQQKASETSSQLPQVVKEGETDPLINAEKGTG---DG---VAK---APAWNSNKDLHA 349
             +QQKASETS+QLPQ+ KE E DPLI AE G+G   DG   V +   AP WNSNKD  A
Sbjct:   301 TQQKASETSTQLPQM-KESEKDPLIAAENGSGVLSDGGGGVQQKTVAPVWNSNKDFQA 357

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006486 "protein glycosylation" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2064316 AT2G30460 "AT2G30460" [Arabidopsis thaliana (taxid:3702)]

 Score = 1227 (437.0 bits), Expect = 7.0e-125, P = 7.0e-125
 Identities = 245/354 (69%), Positives = 268/354 (75%)

Query:     1 MSEGQKFQLGTVGAXXXXXXXXXXXXXCNKALISSLGFTFATTLTSWHLLVTFCSLHVAL 60
             MS+ QKFQLGT+GA             CNKALIS+LGFTFATTLTSWHLLVTFCSLHVAL
Sbjct:     1 MSDAQKFQLGTIGALSLSVVSSVSIVICNKALISTLGFTFATTLTSWHLLVTFCSLHVAL 60

Query:    61 WMKLFEHKPFDPRAVMGFXXXXXXXXXXXXXXXXXXXXXFYQMTKLAIIPCTILLETLFF 120
             WMK FEHKPFDPRAV+GF                     FYQMTKLAIIPCT++LET+FF
Sbjct:    61 WMKFFEHKPFDPRAVLGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVVLETIFF 120

Query:   121 RKKFSRNIQLSXXXXXXXXXXATVTDXXXXXXXXXXXXXXXXTTCVAQIMTNTIQKKFKV 180
             RK FSR IQ S          ATVTD                TTCVAQIMTNTIQKK+KV
Sbjct:   121 RKMFSRKIQFSLVILLLGVGIATVTDLQLNMLGSVLSLLAVITTCVAQIMTNTIQKKYKV 180

Query:   181 SSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFST 240
             SSTQLLYQSCPYQA+TLF+ GPFLDGLLTN+NVFAFKYT  V+FFIVLSCLISVSVNFST
Sbjct:   181 SSTQLLYQSCPYQAITLFVTGPFLDGLLTNQNVFAFKYTSQVVFFIVLSCLISVSVNFST 240

Query:   241 FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLE 300
             FLVIGKTSPVTYQVLGHLKTCLVLAFGY+LL D FSWRNILGIL+AVIGMVLYSY C+LE
Sbjct:   241 FLVIGKTSPVTYQVLGHLKTCLVLAFGYLLLKDAFSWRNILGILVAVIGMVLYSYYCTLE 300

Query:   301 SQQKASETSSQLPQVVKEGETDPLINAEKGTG----DGVAKA-PAWNSNKDLHA 349
             +QQKA+ETS+QLPQ+  E E DPL++AE G+G    +GV K  P WNSNKD  A
Sbjct:   301 TQQKATETSTQLPQM-DENEKDPLVSAENGSGLISDNGVQKQDPVWNSNKDFQA 353

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:504955965 AT2G28315 [Arabidopsis thaliana (taxid:3702)]

 Score = 878 (314.1 bits), Expect = 6.7e-88, P = 6.7e-88
 Identities = 178/328 (54%), Positives = 217/328 (66%)

Query:     1 MSEGQKFQLGTVGAXXXXXXXXXXXXXCNKALISSLGFTFATTLTSWHLLVTFCSLHVAL 60
             M E +  Q+G +GA             CNKAL+++LGF FATTLTSWHL+VT+C+LHVA 
Sbjct:     1 MGEMKSMQMGVIGALFLSVASSVSIVICNKALMTNLGFPFATTLTSWHLMVTYCTLHVAY 60

Query:    61 WMKLFEHKPFDPRAVMGFXXXXXXXXXXXXXXXXXXXXXFYQMTKLAIIPCTILLETLFF 120
              +  FE+KP D R V+ F                     FYQMTKLAIIP T+LLETLF 
Sbjct:    61 KLNFFENKPIDMRTVVLFGLLNGISIGLLNLSLGFNSIGFYQMTKLAIIPFTVLLETLFL 120

Query:   121 RKKFSRNIQLSXXXXXXXXXXATVTDXXXXXXXXXXXXXXXXTTCVAQIMTNTIQKKFKV 180
              KKFS+ I+ S          A++TD                TTCV QI+TNTIQK+  V
Sbjct:   121 NKKFSQKIKFSLFLLLVGVGIASITDLQLNFVGSVLSLLAIATTCVGQILTNTIQKRLNV 180

Query:   181 SSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFST 240
             +STQLLYQS P+QA  LF+ GPF+D  LT+ NVF+F Y+P V+ FI LSCLI+VSVNFST
Sbjct:   181 TSTQLLYQSAPFQAAILFVSGPFVDKYLTSLNVFSFHYSPIVVGFITLSCLIAVSVNFST 240

Query:   241 FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLE 300
             FLVIGKTSPVTYQVLGHLKTCLVLAFGY LLHDPF+ RNI GILIAV+GM+LYSY CS+ 
Sbjct:   241 FLVIGKTSPVTYQVLGHLKTCLVLAFGYTLLHDPFTPRNIAGILIAVLGMLLYSYFCSVA 300

Query:   301 SQQKASETSSQLPQVVKEGETDPLINAE 328
             S+ K + + S    + K+ +T PL+  E
Sbjct:   301 SKSKQASSDSTF--LGKDRDTTPLLGQE 326

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2030076 AT1G76670 [Arabidopsis thaliana (taxid:3702)]

 Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
 Identities = 99/308 (32%), Positives = 153/308 (49%)

Query:     5 QKFQLGTVGAXXXXXXXXXXXXXCNKALISS--LGFTFATTLTSWHLLVTFCSLHV--AL 60
             +K  +  VGA              NK L+SS   GF FATTLT +H   T     V  A 
Sbjct:     8 KKSAVSDVGAWAMNVISSVGIIMANKQLMSSSGFGFGFATTLTGFHFAFTALVGMVSNAT 67

Query:    61 WMKLFEHKPFDPRAVMGFXXXXXXXXXXXXXXXXXXXXXFYQMTKLAIIPCTILLETLFF 120
              +   +H P     ++ F                     FYQ++KL++IP   +LE +  
Sbjct:    68 GLSASKHVPL--WELLWFSIVANISIAAMNFSLMLNSVGFYQISKLSMIPVVCVLEWILH 125

Query:   121 RKKFSRNIQLSXXXXXXXXXXATVTDXXXXXXXXXXXXXXXXTTCVAQIMTNTIQKKFKV 180
              K + + ++ S           TVTD                +T + QI   ++QKK+ V
Sbjct:   126 SKHYCKEVKASVMVVVIGVGICTVTDVKVNAKGFICACTAVFSTSLQQISIGSLQKKYSV 185

Query:   181 SSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFST 240
              S +LL ++ P QA++L I GPF+D LL+ K +  ++ T   +F I+LSC ++V  N S 
Sbjct:   186 GSFELLSKTAPIQAISLLICGPFVDYLLSGKFISTYQMTYGAIFCILLSCALAVFCNISQ 245

Query:   241 FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLE 300
             +L IG+ S  ++QVLGH+KT  VL  G++L     +++NI G+ IA++GMV+YS+   +E
Sbjct:   246 YLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSEMTFKNIAGMAIAIVGMVIYSWAVDIE 305

Query:   301 SQQKASET 308
              Q+ A  T
Sbjct:   306 KQRNAKST 313

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=ISS

GO:0005457 "GDP-fucose transmembrane transporter activity" evidence=IDA

GO:0005459 "UDP-galactose transmembrane transporter activity" evidence=IDA

GO:0005460 "UDP-glucose transmembrane transporter activity" evidence=IDA

GO:0015783 "GDP-fucose transport" evidence=IDA

GO:0015786 "UDP-glucose transport" evidence=IDA

GO:0072334 "UDP-galactose transmembrane transport" evidence=IDA

GO:0009624 "response to nematode" evidence=IEP

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2199557 AT1G21070 [Arabidopsis thaliana (taxid:3702)]

 Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
 Identities = 96/308 (31%), Positives = 156/308 (50%)

Query:     2 SEGQKFQLGTVGAXXXXXXXXXXXXXCNKALISS--LGFTFATTLTSWHLLVTFCSLHV- 58
             +E +   +  VGA              NK L+SS   GF+FATTLT +H  +T     V 
Sbjct:     6 NEKKPSAVSDVGAWAMNVTSSVGIIMANKQLMSSSGFGFSFATTLTGFHFALTALVGMVS 65

Query:    59 -ALWMKLFEHKPFDPRAVMGFXXXXXXXXXXXXXXXXXXXXXFYQMTKLAIIPCTILLET 117
              A  +   +H P     ++ F                     FYQ++KL++IP   ++E 
Sbjct:    66 NATGLSASKHVPL--WELLWFSLVANISIAAMNFSLMLNSVGFYQISKLSMIPVVCVMEW 123

Query:   118 LFFRKKFSRNIQLSXXXXXXXXXXATVTDXXXXXXXXXXXXXXXXTTCVAQIMTNTIQKK 177
             +   K +SR ++ S           TVTD                +T + QI   ++QKK
Sbjct:   124 VLHSKHYSREVKASVMVVVVGVGICTVTDVKVNAKGFICACTAVFSTSLQQISIGSLQKK 183

Query:   178 FKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVN 237
             + + S +LL ++ P QA++L I GPF+D  L+ + +  +K T   +  I+LSC ++V  N
Sbjct:   184 YSIGSFELLSKTAPIQAISLLIFGPFVDYFLSGRFISTYKMTYSAMLCILLSCALAVFCN 243

Query:   238 FSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCC 297
              S +L IG+ S  ++QVLGH+KT  VL  G+++     +++NI G+++AV+GMV+YS+  
Sbjct:   244 ISQYLCIGRFSATSFQVLGHMKTVCVLTLGWLIFDSEMTFKNIAGMVLAVVGMVIYSWAV 303

Query:   298 SLESQQKA 305
              LE Q+K+
Sbjct:   304 ELEKQRKS 311

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2118514 AT4G09810 [Arabidopsis thaliana (taxid:3702)]

 Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
 Identities = 100/296 (33%), Positives = 147/296 (49%)

Query:    29 NKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFE--HKPFDPRAVMGFXXXXXXXX 86
             NKAL+++ GF+FATTLT  H   T     V   +   +  H PF    ++ F        
Sbjct:    32 NKALMATYGFSFATTLTGLHFATTTLMTLVLRCLGYIQPSHLPFTE--LLKFILFANFSI 89

Query:    87 XXXXXXXXXXXXXFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSXXXXXXXXXXATVTD 146
                          FYQ+ KL++IP + LLE +F + ++SR+ +LS           TVTD
Sbjct:    90 VGMNVSLMWNSVGFYQIAKLSMIPVSCLLEVVFDKIRYSRDTKLSIGLVLVGVGVCTVTD 149

Query:   147 XXXXXXXXXXXXXXXXTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDG 206
                             +T + Q   + +Q+K+ +SS  LL  + P QA TL I+GPFLD 
Sbjct:   150 VSVNTKGFVAAFVAVWSTALQQYYVHYLQRKYSLSSFNLLGHTAPAQAATLLIVGPFLDY 209

Query:   207 LLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAF 266
              LT+K V  + Y    + FI LSC I++  N S F+ IG+ + V++QVLGH+KT LVL  
Sbjct:   210 WLTDKRVDMYDYNSVSVMFITLSCTIAIGTNLSQFICIGRFTAVSFQVLGHMKTILVLVM 269

Query:   267 GYVLL-HDPFSWRNILGILIAVIGMVLYSYCCSLESQQKASETSSQLPQVVKEGET 321
             G+     D  +   ILG++IAV+GM+ Y    S    ++    S    +  K G T
Sbjct:   270 GFFFFDRDGLNLHVILGMIIAVLGMIWYGNASSKPGGKEKKNYSLPTTRQQKLGAT 325

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=ISS

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2122467 NST-K1 "nucleotide sugar transporter-KT 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
 Identities = 93/295 (31%), Positives = 148/295 (50%)

Query:    29 NKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFDPRAVMGFXXXXXXXXXX 88
             NKAL+++ GF+FATTLT  H   T        W+   +        ++ F          
Sbjct:    37 NKALMATYGFSFATTLTGLHFGTTTLLTTFLTWLGYIQPSQLPWPDLLKFVLFANFSIVG 96

Query:    89 XXXXXXXXXXXFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSXXXXXXXXXXATVTDXX 148
                        FYQ+ KL++IP + LLE +    ++SR+ +LS           TVTD  
Sbjct:    97 MNVSLMWNSVGFYQIAKLSMIPVSCLLEVMLDNVRYSRDTKLSILLVLAGVAVCTVTDVS 156

Query:   149 XXXXXXXXXXXXXXTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLL 208
                           +T + Q   + +Q+K+ + S  LL  + P QA +L ++GPFLD  L
Sbjct:   157 VNLNGFLAAAIAVWSTALQQYYVHYLQRKYSLGSFNLLAHTAPVQAASLLLVGPFLDYWL 216

Query:   209 TNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGY 268
             TN+ V A+ ++   LFF++LSC I+V  N S F+ IG+ + V++QVLGH+KT LVL  G+
Sbjct:   217 TNQRVDAYNFSFVSLFFLILSCSIAVGTNLSQFICIGRFTAVSFQVLGHMKTILVLVLGF 276

Query:   269 VLL-HDPFSWRNILGILIAVIGMVLYSYCCSLESQQKASETSSQLPQVVKEGETD 322
                  +  + + +LG+LIA++GM+ Y    S    ++    S  + +  K  ET+
Sbjct:   277 TFFGKEGLNLQVVLGMLIAILGMIWYGNASSKPGGKERRSLSIPITKSQKLSETN 331

GO:0005886 "plasma membrane" evidence=ISM

GO:0000139 "Golgi membrane" evidence=IDA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IDA

GO:0015780 "nucleotide-sugar transport" evidence=IDA

GO:0055085 "transmembrane transport" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2162271 AT5G42420 [Arabidopsis thaliana (taxid:3702)]

 Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
 Identities = 87/278 (31%), Positives = 148/278 (53%)

Query:    29 NKALISSLGF--TFATTLTSWHLLVTFCSLHV--ALWMKLFEHKPFDPRAVMGFXXXXXX 84
             NK L+SS GF  +FATTLT +H  +T     V  A      +H P     ++ F      
Sbjct:    33 NKQLMSSSGFAFSFATTLTGFHFALTALVGMVSNATGFSASKHVPM--WELIWFSIVANV 90

Query:    85 XXXXXXXXXXXXXXXFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSXXXXXXXXXXATV 144
                            FYQ++KL++IP   ++E +   K++SR +++S           TV
Sbjct:    91 SIAAMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHSKRYSREVKISVVVVVVGVGICTV 150

Query:   145 TDXXXXXXXXXXXXXXXXTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFL 204
             TD                ++ + QI+  ++QKK+ + S +LL ++ P QA +L ++GP +
Sbjct:   151 TDVKVNAKGFICACVAIFSSSLQQILIGSLQKKYSIGSFELLSKTAPIQAFSLLVVGPLV 210

Query:   205 DGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVL 264
             D LL+ K +  +  +     FI+LSC ++V  N S +L IG+ S V++QV+GH+KT  +L
Sbjct:   211 DYLLSGKFIMKYNMSSGCFLFILLSCGLAVFCNISQYLCIGRFSAVSFQVIGHMKTVCIL 270

Query:   265 AFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLESQ 302
               G++L     +++N+ G+++A++GMV+YS+   LE Q
Sbjct:   271 TLGWLLFDSAMTFKNVAGMIVAIVGMVIYSWAMELEKQ 308

GO:0005886 "plasma membrane" evidence=ISM

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2009076 AT1G34020 [Arabidopsis thaliana (taxid:3702)]

 Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
 Identities = 90/273 (32%), Positives = 139/273 (50%)

Query:    29 NKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFE--HKPFDPRAVMGFXXXXXXXX 86
             NKAL+++ G++FATTLT  H   T     V   +   +  H PF    ++ F        
Sbjct:    32 NKALMATYGYSFATTLTGLHFATTTLMTLVLRCLGYIQPSHLPFTE--LLRFILFANFSI 89

Query:    87 XXXXXXXXXXXXXFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSXXXXXXXXXXATVTD 146
                          FYQ+ KL++IP + LLE +F + ++SR+ +LS           TVTD
Sbjct:    90 VGMNVSLMWNSVGFYQIAKLSMIPVSCLLEMVFDKIRYSRDTKLSIGLVLVGVGVCTVTD 149

Query:   147 XXXXXXXXXXXXXXXXTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDG 206
                             +T + Q   + +Q+K+ ++S  LL  + P QA TL ++GPFLD 
Sbjct:   150 VSVNTKGFVAAFVAVWSTALQQYYVHYLQRKYSLNSFNLLGHTAPAQAATLLVVGPFLDY 209

Query:   207 LLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAF 266
              LT K V  + Y    + FI LSC I++  N S F+ IG+ + V++QVLGH+KT LVL  
Sbjct:   210 WLTEKRVDMYDYNLVSVLFITLSCTIAIGTNLSQFICIGRFTAVSFQVLGHMKTILVLIM 269

Query:   267 GYVLL-HDPFSWRNILGILIAVIGMVLYSYCCS 298
             G+     +  +   ++G++IAV+GM+ Y    S
Sbjct:   270 GFFFFGREGLNLHVVVGMIIAVLGMIWYGNASS 302

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0016020 "membrane" evidence=ISS

GO:0006863 "purine nucleobase transport" evidence=RCA

ZFIN|ZDB-GENE-041210-186 slc35e3 "solute carrier family 35, member E3" [Danio rerio (taxid:7955)]

 Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
 Identities = 80/285 (28%), Positives = 127/285 (44%)

Query:    29 NKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFDPRAVMGFXXXXXXXXXX 88
             NK +    GF    TLT  H ++T+  L +   M +F  K   P  ++            
Sbjct:    36 NKWIYVHYGFP-NMTLTLIHFVMTWLGLFICQKMDIFAPKSLRPSKILLLALSFCGFVVF 94

Query:    89 XXXXXXXXXXXFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSXXXXXXXXXXATVTDXX 148
                         YQ+ K+   P  I ++T+++RK FS  I+L+           +  D  
Sbjct:    95 TNLSLQSNTIGTYQLAKVMTTPVIIAIQTMYYRKTFSTKIKLTLVPITLGVILNSYYDVR 154

Query:   149 XXXXXXXXXXXXXXTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLL 208
                            T + Q+     Q + +V+S QLLY   P  +  L ++ PF + L 
Sbjct:   155 FNLMGMIFATLGVLVTSLYQVWVGAKQHELQVNSMQLLYYQAPMSSAFLLVLVPFFEPLT 214

Query:   209 TNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGY 268
              +  +F   ++   LF ++LS +I+  VN S + +IG TSPVTY + GH K C+ L  GY
Sbjct:   215 GDGGIFG-PWSFLALFMVLLSGVIAFLVNLSIYWIIGNTSPVTYNMFGHFKFCITLLGGY 273

Query:   269 VLLHDPFSWRNILGILIAVIGMVLYSYCCSLESQQKASETSSQLP 313
             VL  DP S    LGIL  + G++ Y++   L  Q++     +Q P
Sbjct:   274 VLFQDPLSLNQGLGILCTLTGILAYTHF-KLAEQEEGKSRLTQRP 317

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6PGC7	S35E3_MOUSE	No assigned EC number	0.3122	0.8538	0.9520	yes	no
A4IFK2	S35E3_BOVIN	No assigned EC number	0.3255	0.8538	0.9520	yes	no
Q1JQ66	S35E3_DANRE	No assigned EC number	0.3311	0.8567	0.9552	yes	no
Q7Z769	S35E3_HUMAN	No assigned EC number	0.3222	0.8538	0.9520	yes	no
Q8RXL8	Y1689_ARATH	No assigned EC number	0.8631	0.9971	0.9747	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_LG_XIX0951 SubName- Full=Putative uncharacterized protein; (354 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	349
pfam03151	149	pfam03151, TPT, Triose-phosphate Transporter famil	7e-31
PTZ00343	350	PTZ00343, PTZ00343, triose or hexose phosphate/pho	1e-08
pfam08449	303	pfam08449, UAA, UAA transporter family	2e-08
TIGR00817	302	TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate	3e-08
COG5070	309	COG5070, VRG4, Nucleotide-sugar transporter [Carbo	2e-07
TIGR00803	222	TIGR00803, nst, UDP-galactose transporter	1e-05
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	3e-05

>gnl|CDD|217390 pfam03151, TPT, Triose-phosphate Transporter family

 Score =  113 bits (286), Expect = 7e-31
 Identities = 46/149 (30%), Positives = 79/149 (53%), Gaps = 6/149 (4%)

Query: 153 GSVLSLLAVLTTCVAQIMTNTIQKK---FKVSSTQLLYQSCPYQALTLFIIGPFLDGLLT 209
           G +L+L A     +  I++  + KK    K++  +LLY   P   + L     F +G   
Sbjct: 1   GFILALAASALFALRLILSQKLLKKKKGTKLNVLELLYYLSPVAFIVLLPGLLFSEGFKL 60

Query: 210 NKNV---FAFKYTPYVLFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAF 266
            K +   F    T   +  ++LS +++   N S F ++G+TSP+T  V G +K  +V+  
Sbjct: 61  GKFILKFFGDLKTSRYVLLLLLSGVLAFLYNLSAFGLLGRTSPLTSSVAGTVKRVVVIVL 120

Query: 267 GYVLLHDPFSWRNILGILIAVIGMVLYSY 295
             ++  DP ++ NILG+ IA++G+VLYSY
Sbjct: 121 SVIIFGDPVTFLNILGLAIAILGVVLYSY 149

This family includes transporters with a specificity for triose phosphate. Length = 149

>gnl|CDD|240371 PTZ00343, PTZ00343, triose or hexose phosphate/phosphate translocator; Provisional

 Score = 55.9 bits (135), Expect = 1e-08
 Identities = 53/215 (24%), Positives = 95/215 (44%), Gaps = 11/215 (5%)

Query: 91  LSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDLQLN 150
           +S+G  +V F  + K A    T LL  LF ++  +    LSL+ ++ GV +A+V +L   
Sbjct: 133 ISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFT 192

Query: 151 VLGSVLSLLAVLTT-----CVAQIMTNTIQKKFKVSSTQL-----LYQSCPYQALTLFII 200
            L    ++L+ L +        + M N  +    ++++ +     L  S     L LF  
Sbjct: 193 WLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFE 252

Query: 201 GPFLDGLLTNKNVFAFKYTPY-VLFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLK 259
           G     + TN       YT   ++F I  S +     N   F  +GK + VT+ V   LK
Sbjct: 253 GKKWVPVWTNYTANMTNYTKGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLK 312

Query: 260 TCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYS 294
             +++    ++     +    LG+ +A++G +LYS
Sbjct: 313 RVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYS 347

Length = 350

>gnl|CDD|219846 pfam08449, UAA, UAA transporter family

 Score = 54.5 bits (132), Expect = 2e-08
 Identities = 54/259 (20%), Positives = 108/259 (41%), Gaps = 12/259 (4%)

Query: 49  LLVTFCSLHVALWMKLFEHKPFDPRAVMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLA- 107
           L ++   L   L  K  + +    +  +       +S  L N +L + S   + + K   
Sbjct: 41  LFISLVGLLYLLLFKKLKPRKIPLKTYVLIVATFFLSSVLNNEALKYISYPTHVIFKSCK 100

Query: 108 IIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATV---TDLQLNVLGSVLSLLAVLTT 164
           +IP  ++L  L + K++S    LS +++ +GV I T+    D + + L +    + +   
Sbjct: 101 LIP-VMILGILIYGKRYSSLQYLSALLITLGVIIFTLASAKDSKNSKLTTFSDNVGIALL 159

Query: 165 CVAQIM---TNTIQ----KKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFK 217
             A +M   T   Q    KK+   S ++++ S         +    +   L         
Sbjct: 160 FGALLMDALTGNTQEKLYKKYGKHSKEMMFYSHLLSLPFFLLGLLDIRTGLLFSAESFCL 219

Query: 218 YTPYVLFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSW 277
             P VLF+++L+ L      F  F +I +   +T  ++  L+  + L    +L  +P + 
Sbjct: 220 RHPSVLFYLLLNSLTQYVGQFFVFYLISEFGALTVTLVTTLRKFVSLLLSVLLFGNPLTL 279

Query: 278 RNILGILIAVIGMVLYSYC 296
           +  LG L+  +G+ LY+Y 
Sbjct: 280 QQWLGTLLVFLGIFLYAYL 298

This family includes transporters with a specificity for UDP-N-acetylglucosamine. Length = 303

>gnl|CDD|129898 TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate translocator

 Score = 54.0 bits (130), Expect = 3e-08
 Identities = 47/218 (21%), Positives = 95/218 (43%), Gaps = 17/218 (7%)

Query: 90  NLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDLQL 149
           N+SL   +V F    K      +++L   F  ++F   + LSL+ ++ GV +A+ T+L  
Sbjct: 83  NVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSF 142

Query: 150 NVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALT-LFIIGPFLDGLL 208
           N  G + ++++ +T     I +        +  T L      Y ++  LF++ P     +
Sbjct: 143 NWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLY----AYISIMSLFLLSPP--AFI 196

Query: 209 TNKNVFAFKYTPYVLFFIVLSCLISVSV----------NFSTFLVIGKTSPVTYQVLGHL 258
           T    F        +  + ++ + +VS+              F+++G+ SP+T+ V   +
Sbjct: 197 TEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCM 256

Query: 259 KTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYC 296
           K  +V+    +      S + + G  IA+ G+ LYS  
Sbjct: 257 KRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRV 294

The 6-8 TMS Triose-phosphate Transporter (TPT) Family (TC 2.A.7.9)Functionally characterized members of the TPT family are derived from the inner envelope membranes of chloroplasts and nongreen plastids of plants. However,homologues are also present in yeast. Saccharomyces cerevisiae has three functionally uncharacterized TPT paralogues encoded within its genome. Under normal physiologicalconditions, chloroplast TPTs mediate a strict antiport of substrates, frequently exchanging an organic three carbon compound phosphate ester for inorganic phosphate (Pi).Normally, a triose-phosphate, 3-phosphoglycerate, or another phosphorylated C3 compound made in the chloroplast during photosynthesis, exits the organelle into thecytoplasm of the plant cell in exchange for Pi. However, experiments with reconstituted translocator in artificial membranes indicate that transport can also occur by achannel-like uniport mechanism with up to 10-fold higher transport rates. Channel opening may be induced by a membrane potential of large magnitude and/or by high substrateconcentrations. Nongreen plastid and chloroplast carriers, such as those from maize endosperm and root membranes, mediate transport of C3 compounds phosphorylated atcarbon atom 2, particularly phosphenolpyruvate, in exchange for Pi. These are the phosphoenolpyruvate:Pi antiporters (PPT). Glucose-6-P has also been shown to be asubstrate of some plastid translocators (GPT). The three types of proteins (TPT, PPT and GPT) are divergent in sequence as well as substrate specificity, but their substratespecificities overlap [Hypothetical proteins, Conserved]. Length = 302

>gnl|CDD|227402 COG5070, VRG4, Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

 Score = 51.4 bits (123), Expect = 2e-07
 Identities = 63/292 (21%), Positives = 120/292 (41%), Gaps = 11/292 (3%)

Query: 21  SSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFDPRAVMGFGV 80
           SS+ + + NK ++S+LGF     L +   LV    L +  +++L E +    +       
Sbjct: 17  SSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFRLTKAKKWFPISF 76

Query: 81  LNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVG 140
           L  + I   + SL + +V  Y + K   I      E LFF  + +    LS +++++   
Sbjct: 77  LLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSV 136

Query: 141 IATVTDLQ--------LNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPY 192
           +AT  D Q        LN     +    + +     IM   I+         + Y +   
Sbjct: 137 VATWGDQQASAFKAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNL-- 194

Query: 193 QALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVIGKTSPVTY 252
            +L + +   FL    +  N+ A   +   L  + +S L SV +++ +   +  TS  TY
Sbjct: 195 LSLPILLSFSFLFEDWSPGNL-ANNLSVDSLMAMFISGLCSVGISYCSAWCVRVTSSTTY 253

Query: 253 QVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLESQQK 304
            ++G L    +   G V    P ++ +I  IL+  +   +Y+   S + Q +
Sbjct: 254 SMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQQNQ 305

Length = 309

>gnl|CDD|129885 TIGR00803, nst, UDP-galactose transporter

 Score = 45.4 bits (108), Expect = 1e-05
 Identities = 39/202 (19%), Positives = 64/202 (31%), Gaps = 16/202 (7%)

Query: 101 YQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIA---TVTDLQLNVLGSVLS 157
            Q+T+L I   T L+           +   SL +L +GV I      +   L     V+ 
Sbjct: 28  KQVTQLKI-LSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFGNPVVG 86

Query: 158 LLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFL------DGLLTNK 211
           L AVL+  ++        +K       + +       L LF +          DG L + 
Sbjct: 87  LSAVLSALLSSGFAGVYFEKILKDGDTMFWSR--NLQLPLFGLFSTFSVLLWSDGTLISN 144

Query: 212 NVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLL 271
             F   Y   V    +L+    + +      V+      T   +  L   L       L 
Sbjct: 145 FGFFIGYPTAVWIVGLLNVGGGLCIG----GVVRYADNTTKSFVTALSIILSTLASVRLF 200

Query: 272 HDPFSWRNILGILIAVIGMVLY 293
               S    LG ++  +   LY
Sbjct: 201 DAKISSTFYLGAILVFLATFLY 222

The 10-12 TMS Nucleotide Sugar Transporters (TC 2.A.7.10)Nucleotide-sugar transporters (NSTs) are found in the Golgi apparatus and the endoplasmic reticulum of eukaryotic cells. Members of the family have been sequenced from yeast, protozoans and animals. Animals such as C. elegans possess many of these transporters. Humans have at least two closely related isoforms of the UDP-galactose:UMP exchange transporter.NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids. Length = 222

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 44.5 bits (105), Expect = 3e-05
 Identities = 50/288 (17%), Positives = 100/288 (34%), Gaps = 8/288 (2%)

Query: 9   LGTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHK 68
           LG +  L   ++  +S +    A+ S   F FA  L      +    L +     L    
Sbjct: 7   LGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPAL 66

Query: 69  PFDPRAVMGFGVLNGISIGLLNLSLGFNSVGFYQ-MTKLAIIPCTILLETLFFRKKFSRN 127
                 ++   +   +   LL L+L + S      +  L  +   +L   L   ++ S  
Sbjct: 67  RPWLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLL 126

Query: 128 IQLSLVILLVGVGIATVTDLQLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLY 187
             L +++ L GV +  +      +L  +  LLA+    +  + T  +++  ++    L  
Sbjct: 127 QILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWALYTALVKRLSRLGPVTLAL 186

Query: 188 QSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVIGKT 247
                  L   ++   L  L       A   +   L  + L    +       +  +   
Sbjct: 187 -------LLQLLLALLLLLLFFLSGFGAPILSRAWLLLLYLGVFSTGLAYLLWYYALRLL 239

Query: 248 SPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSY 295
                 +L  L+       G +LL +P S   +LG  + V+G++L S 
Sbjct: 240 GASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASL 287

Length = 292

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	349
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	100.0
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	100.0
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	100.0
PLN00411	358	nodulin MtN21 family protein; Provisional	99.98
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.97
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.97
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.96
PRK11689	295	aromatic amino acid exporter; Provisional	99.96
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.95
PRK11272	292	putative DMT superfamily transporter inner membran	99.95
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.95
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.95
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.95
PRK15430	296	putative chloramphenical resistance permease RarD;	99.95
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.94
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.93
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.89
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.86
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.86
KOG1581	327	consensus UDP-galactose transporter related protei	99.85
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.85
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.84
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.83
KOG2766	336	consensus Predicted membrane protein [Function unk	99.82
KOG1580	337	consensus UDP-galactose transporter related protei	99.82
COG2962	293	RarD Predicted permeases [General function predict	99.81
KOG2765	416	consensus Predicted membrane protein [Function unk	99.79
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.79
KOG1582	367	consensus UDP-galactose transporter related protei	99.78
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.78
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.78
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.77
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.71
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	99.36
COG2510	140	Predicted membrane protein [Function unknown]	99.31
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.16
COG2510	140	Predicted membrane protein [Function unknown]	99.12
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	99.12
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.08
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.05
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.95
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.95
PRK15430	296	putative chloramphenical resistance permease RarD;	98.9
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.76
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.69
PLN00411	358	nodulin MtN21 family protein; Provisional	98.69
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.6
PRK11689	295	aromatic amino acid exporter; Provisional	98.36
PRK11272	292	putative DMT superfamily transporter inner membran	98.33
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.33
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.33
PRK13499	345	rhamnose-proton symporter; Provisional	98.29
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.25
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.2
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.19
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.14
COG2962	293	RarD Predicted permeases [General function predict	98.14
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.14
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.04
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.95
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.95
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.89
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.89
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.85
COG0697	292	RhaT Permeases of the drug/metabolite transporter	97.7
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	97.67
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.67
KOG2922	335	consensus Uncharacterized conserved protein [Funct	97.62
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.55
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.55
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.49
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	97.47
PRK11431	105	multidrug efflux system protein; Provisional	97.44
COG2076	106	EmrE Membrane transporters of cations and cationic	97.4
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.35
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	97.35
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.31
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.25
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.23
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.22
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.05
PRK13499	345	rhamnose-proton symporter; Provisional	97.0
PRK09541	110	emrE multidrug efflux protein; Reviewed	96.95
PRK11431	105	multidrug efflux system protein; Provisional	96.94
KOG4510	346	consensus Permease of the drug/metabolite transpor	96.85
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	96.73
COG2076	106	EmrE Membrane transporters of cations and cationic	96.66
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	96.6
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	96.31
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.22
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	95.9
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	95.86
KOG1581	327	consensus UDP-galactose transporter related protei	94.99
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	94.84
KOG1580	337	consensus UDP-galactose transporter related protei	94.6
KOG2765	416	consensus Predicted membrane protein [Function unk	94.52
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	94.43
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	93.79
KOG2922	335	consensus Uncharacterized conserved protein [Funct	93.69
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	92.2
PF05297	381	Herpes_LMP1: Herpesvirus latent membrane protein 1	90.75
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	90.03
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	89.72
PF07168	336	Ureide_permease: Ureide permease; InterPro: IPR009	88.64
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	84.87

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=100.00  E-value=4.6e-37  Score=279.43  Aligned_cols=288  Identities=19%  Similarity=0.188  Sum_probs=236.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHcc---ccccCCCCchhHHHHHHHHHHHH
Q 018894           10 GTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMK---LFEHKPFDPRAVMGFGVLNGISI   86 (349)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~   86 (349)
                      ..+..+++|+.+|++.+++||++++  ++++|+.++++|+.++.+++...+..+   +.+.++++++.+++.|++.+.+.
T Consensus         2 ~~~~~~~~w~~~~~~~~~~NK~~l~--~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   79 (302)
T TIGR00817         2 QTGLLFGLWYFLNVYFNIYNKKLLN--VFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGH   79 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHh--hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            4567889999999999999999998  589999999999999987766653222   22224456778888999988899


Q ss_pred             hhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeecccccchhHHHHHHHHHHHHHH
Q 018894           87 GLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDLQLNVLGSVLSLLAVLTTCV  166 (349)
Q Consensus        87 ~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~~~~a~  166 (349)
                      .+.+.++++++++.++++++++|+++++++++++|||++++++.+++++++|+.+...++.+.+..|+++++++++++++
T Consensus        80 ~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~  159 (302)
T TIGR00817        80 VTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVS  159 (302)
T ss_pred             HHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999987766667777899999999999999


Q ss_pred             HHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhccccccccc-cc--ccCc-hhHHHHHHHHH-HHHHHHHHHH
Q 018894          167 AQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVF-AF--KYTP-YVLFFIVLSCL-ISVSVNFSTF  241 (349)
Q Consensus       167 ~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~-~~--~~~~-~~~~~~~~~~~-~~~~~~~~~~  241 (349)
                      |.++.||..++.+.|+.+...|++..+++.++|.....|++....... ..  .... ..+...+..+. ....++...+
T Consensus       160 ~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (302)
T TIGR00817       160 RNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAF  239 (302)
T ss_pred             HHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999988755679999999999999988888876555422111000 00  0111 12222333333 3334556677


Q ss_pred             HhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhccc
Q 018894          242 LVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSL  299 (349)
Q Consensus       242 ~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~~  299 (349)
                      .++++.+|+++++..+++|++++++|++++||++|+.+++|+++++.|+.+|++.|.+
T Consensus       240 ~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~  297 (302)
T TIGR00817       240 MLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQ  297 (302)
T ss_pred             HHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhcc
Confidence            8999999999999999999999999999999999999999999999999999976543

specificities overlap.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=100.00  E-value=1.3e-35  Score=273.74  Aligned_cols=287  Identities=19%  Similarity=0.214  Sum_probs=242.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHccccccC-----CCCchhHHHHHHHH
Q 018894            8 QLGTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHK-----PFDPRAVMGFGVLN   82 (349)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~   82 (349)
                      .++.+..++.|+.+|+..++.||++++  .+++|++++++|++++.+++..++..+.++.+     +.+++..++.|+++
T Consensus        47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~--~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~  124 (350)
T PTZ00343         47 KWKLALLFLTWYALNVLYVVDNKLALN--MLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCH  124 (350)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHH--hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence            678889999999999999999999999  47889999999999998776555443332222     22456888999998


Q ss_pred             HHHHhhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeecccccchhHHHHHHHHHH
Q 018894           83 GISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDLQLNVLGSVLSLLAVL  162 (349)
Q Consensus        83 ~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~~  162 (349)
                      ...+...+.++++++++.++++++++|+++++++++++|||++++++.+++++++|+.+++.++.+++..|++++++|++
T Consensus       125 ~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~  204 (350)
T PTZ00343        125 LFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNL  204 (350)
T ss_pred             HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHH
Confidence            87777788999999999999999999999999999999999999999999999999999998888888899999999999


Q ss_pred             HHHHHHHHHHHHHhhc-----CCCHHHHHHHhhHHHHHHHHHHHHhhhccccccc------ccccccCchhHHHHHHHHH
Q 018894          163 TTCVAQIMTNTIQKKF-----KVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKN------VFAFKYTPYVLFFIVLSCL  231 (349)
Q Consensus       163 ~~a~~~v~~k~~~~~~-----~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~  231 (349)
                      ++|+|+++.|+.++++     +.++.+...+..++++++++|..+..|+......      ..........++.++.+++
T Consensus       205 ~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~l  284 (350)
T PTZ00343        205 GSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFFSGV  284 (350)
T ss_pred             HHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHHHHH
Confidence            9999999999998754     3567777777888999999888776654211100      0000011234456677788


Q ss_pred             HHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhh
Q 018894          232 ISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYC  296 (349)
Q Consensus       232 ~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~  296 (349)
                      ..++++...+.++++++|.++++.++++|+++++++++++||++|+.+++|+++++.|+++|++.
T Consensus       285 ~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~  349 (350)
T PTZ00343        285 WYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLF  349 (350)
T ss_pred             HHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence            88888888889999999999999999999999999999999999999999999999999999875

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=100.00  E-value=5.4e-35  Score=259.58  Aligned_cols=296  Identities=31%  Similarity=0.482  Sum_probs=260.7

Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHccccccCC----CCchhHHHHH
Q 018894            4 GQKFQLGTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKP----FDPRAVMGFG   79 (349)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~----~~~~~~~~~~   79 (349)
                      +++.......++..|++++++.+++||+++++.++++|++++..+.+.+.+.+......+..+.++    ..++..+++|
T Consensus        11 ~~~~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~   90 (316)
T KOG1441|consen   11 QLKKILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLG   90 (316)
T ss_pred             ccchhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHH
Confidence            344567777889999999999999999999998999999999999999988888888777655543    6789999999


Q ss_pred             HHHHHHHhhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeecccccchhHHHHHHH
Q 018894           80 VLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDLQLNVLGSVLSLL  159 (349)
Q Consensus        80 ~~~~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~~~~~~~G~~~~l~  159 (349)
                      ++++++..+.|.++.+++++.+++++.++|++++++++++.+|+.+...+.+++.+..|+.+++.+|.++|+.|.+.+++
T Consensus        91 ~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~  170 (316)
T KOG1441|consen   91 LVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMI  170 (316)
T ss_pred             HHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHH--hhcCCCHHHHHHHhhHHHHHHHH-HHHHhhhccccccccccc-ccCchhHHHHHHHHHHHHH
Q 018894          160 AVLTTCVAQIMTNTIQ--KKFKVSSTQLLYQSCPYQALTLF-IIGPFLDGLLTNKNVFAF-KYTPYVLFFIVLSCLISVS  235 (349)
Q Consensus       160 s~~~~a~~~v~~k~~~--~~~~~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  235 (349)
                      +.+..+.++++.|+++  |+++.|+++++.|+.+++.+.++ |.....|+... . .... .+....+.+ ++..++++.
T Consensus       171 s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~-~~~~~~~~~~~~~~-~~~sv~~f~  247 (316)
T KOG1441|consen  171 SNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-V-GFLTAPWFVTFLIL-LLNSVLAFL  247 (316)
T ss_pred             HHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccce-e-eeeccccchhhHHH-HHHHHHHHH
Confidence            9999999999999999  46789999999999999999998 66555554332 1 1111 233333334 444499999


Q ss_pred             HHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhcccccc
Q 018894          236 VNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLESQ  302 (349)
Q Consensus       236 ~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~~~~~  302 (349)
                      +|...+.++.+++|++.++.+.++.++.++.++++|++++|+.+..|+++.+.|+.+|++.|.++++
T Consensus       248 ~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~  314 (316)
T KOG1441|consen  248 LNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKK  314 (316)
T ss_pred             HHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhc
Confidence            9999999999999999999999999999999999999999999999999999999999988776543

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.98  E-value=4.8e-30  Score=235.88  Aligned_cols=290  Identities=13%  Similarity=0.197  Sum_probs=219.4

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHccc--cccCCCCchh---HHHHH
Q 018894            5 QKFQLGTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKL--FEHKPFDPRA---VMGFG   79 (349)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~--~~~~~~~~~~---~~~~~   79 (349)
                      ++|......++++.-.+..++..+.|..++. +.+ |..+.++|+.++.+++.++.+.++  ++.++.++++   +...+
T Consensus         8 ~~~~~~~~~~~~~~q~~~~~~~~~~k~a~~~-G~~-~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g   85 (358)
T PLN00411          8 WRREAVFLTAMLATETSVVGISTLFKVATSK-GLN-IYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLG   85 (358)
T ss_pred             hhhccchHHHHHHHHHHHHHHHHHHHHHHHC-CCC-ccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHH
Confidence            5567777888999999999999999999974 544 777889999999988877654332  2223334444   44445


Q ss_pred             HHHHHHHhhcceeccccchhHHHHHhhhHHHHHHHHHHHH------hccccchhhhHHHHHhhhhheeeeec-cc-----
Q 018894           80 VLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLF------FRKKFSRNIQLSLVILLVGVGIATVT-DL-----  147 (349)
Q Consensus        80 ~~~~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~------~~e~~s~~~~~~i~l~~~Gv~l~~~~-~~-----  147 (349)
                      ++..++..+.+.+++|++++.+.++.++.|++++++++++      +|||++++++.|++++++|+.++... +.     
T Consensus        86 ~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~  165 (358)
T PLN00411         86 FLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVA  165 (358)
T ss_pred             HHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccc
Confidence            5554455688999999999999999999999999999999      69999999999999999999976531 11     


Q ss_pred             ------------------ccc-hhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhccc
Q 018894          148 ------------------QLN-VLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLL  208 (349)
Q Consensus       148 ------------------~~~-~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~  208 (349)
                                        ..+ ..|+++.++++++||+|+++.|+..++++ ++....++...++.+...+.....+...
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~-~~~~~t~~~~~~~~~~~~~~~l~~~~~~  244 (358)
T PLN00411        166 SSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYP-AAFTVSFLYTVCVSIVTSMIGLVVEKNN  244 (358)
T ss_pred             cccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-cHhHHHHHHHHHHHHHHHHHHHHHccCC
Confidence                              012 35999999999999999999999988653 3345566666666666555544444221


Q ss_pred             ccccccccccCchhHHHHHHHHHHHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHH
Q 018894          209 TNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVI  288 (349)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~  288 (349)
                      ..  .+...++...+ .++..++.+.+.+..+++++++.+|.+++++.+++|+++++++++++||++++.+++|+++++.
T Consensus       245 ~~--~~~~~~~~~~~-~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~  321 (358)
T PLN00411        245 PS--VWIIHFDITLI-TIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITL  321 (358)
T ss_pred             cc--cceeccchHHH-HHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHH
Confidence            11  11111222222 2333444455566788899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhcccc
Q 018894          289 GMVLYSYCCSLE  300 (349)
Q Consensus       289 g~~l~~~~~~~~  300 (349)
                      |+++.++.++++
T Consensus       322 Gv~l~~~~~~~~  333 (358)
T PLN00411        322 GFYAVMWGKANE  333 (358)
T ss_pred             HHHHHHhhhhhh
Confidence            999988755544

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.97  E-value=6.3e-29  Score=215.86  Aligned_cols=297  Identities=23%  Similarity=0.302  Sum_probs=261.5

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHccccccCCCC---chhHHHHHHH
Q 018894            5 QKFQLGTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFD---PRAVMGFGVL   81 (349)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~---~~~~~~~~~~   81 (349)
                      .+.+.......+.|+.+|+.+.+.||+++++++||...++...|.+.+.+.+....+.|..+.++.+   .|+++|.+++
T Consensus         7 ~~~~~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~l   86 (314)
T KOG1444|consen    7 SKKQSSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLL   86 (314)
T ss_pred             chhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHH
Confidence            3445666789999999999999999999998888877777779999999999999888877666555   4799999999


Q ss_pred             HHHHHhhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeecccccchhHHHHHHHHH
Q 018894           82 NGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDLQLNVLGSVLSLLAV  161 (349)
Q Consensus        82 ~~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~  161 (349)
                      +.++.+....+++|++++++++++..+|+++++...+++|.|++...|.++....+|.......|..++..|+.+++.++
T Consensus        87 f~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~  166 (314)
T KOG1444|consen   87 FVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANC  166 (314)
T ss_pred             HHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHHHHHHHHHHH
Q 018894          162 LTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTF  241 (349)
Q Consensus       162 ~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (349)
                      ++.+.+.+..|+..+..+.+.+.+++|.++...+.+.....+++++..-....+.......+..+.++|++++..++..+
T Consensus       167 ~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s~  246 (314)
T KOG1444|consen  167 LTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGFGISYTSF  246 (314)
T ss_pred             HHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999988889999999999999888887776665433111111123345677889999999999999999


Q ss_pred             HhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhccccc
Q 018894          242 LVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLES  301 (349)
Q Consensus       242 ~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~~~~  301 (349)
                      ++.+..++++.++++......+.+...++++++.++..++|..+-+.|.++|++.+.+++
T Consensus       247 ~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k  306 (314)
T KOG1444|consen  247 LCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKK  306 (314)
T ss_pred             HHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhc
Confidence            999999999999999777778888888888899999999999999999999998776543

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.97  E-value=7.1e-28  Score=216.97  Aligned_cols=274  Identities=18%  Similarity=0.206  Sum_probs=225.2

Q ss_pred             HHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHccccc-----cCCCCchhHHHHHHHHHHHHhhcceecc
Q 018894           20 ISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFE-----HKPFDPRAVMGFGVLNGISIGLLNLSLG   94 (349)
Q Consensus        20 ~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~al~   94 (349)
                      .+..+.+..+..+.++ +.+.|.+.+++-++.-.++.......|+.+     ..+.+|.+++.++++...++++.+.|++
T Consensus        23 l~~~~t~~~s~~l~~~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~  101 (334)
T PF06027_consen   23 LCITGTGTFSSLLANK-GVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAYQ  101 (334)
T ss_pred             HHHHhHHHHHHHHHhc-CccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHhh
Confidence            3334556677777776 888899999888877666655544333222     1345667788889999999999999999


Q ss_pred             ccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeeccc---------ccchhHHHHHHHHHHHHH
Q 018894           95 FNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDL---------QLNVLGSVLSLLAVLTTC  165 (349)
Q Consensus        95 ~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~~---------~~~~~G~~~~l~s~~~~a  165 (349)
                      |++.+.++++.+++.+++++++++++|+|+++.+++|++++++|+.++...|.         +....|++++++++++||
T Consensus       102 yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya  181 (334)
T PF06027_consen  102 YTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYA  181 (334)
T ss_pred             cccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999998876441         234689999999999999


Q ss_pred             HHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHHHHHHHHHHHHhhc
Q 018894          166 VAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVIG  245 (349)
Q Consensus       166 ~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (349)
                      +++|+.|+..|  +.++.+...+..+++.++..+...+.|....    ...+++.....+.+..++..+..+......++
T Consensus       182 ~~nV~~E~~v~--~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i----~~~~w~~~~~~~~v~~~~~lf~~y~l~p~~l~  255 (334)
T PF06027_consen  182 VSNVLEEKLVK--KAPRVEFLGMLGLFGFIISGIQLAILERSGI----ESIHWTSQVIGLLVGYALCLFLFYSLVPIVLR  255 (334)
T ss_pred             HHHHHHHHhcc--cCCHHHHHHHHHHHHHHHHHHHHHheehhhh----hccCCChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999  4578999999999999998888777664321    12345555666666677766666667777899


Q ss_pred             ccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhcccc
Q 018894          246 KTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLE  300 (349)
Q Consensus       246 ~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~~~  300 (349)
                      ..+|+...+-..+..+++++++++++|+++++..++|.+++++|.++|+..+.++
T Consensus       256 ~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~  310 (334)
T PF06027_consen  256 MSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPE  310 (334)
T ss_pred             hCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCcc
Confidence            9999999998889999999999999999999999999999999999998765543

Some of the sequences in this family are annotated as putative membrane proteins.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.96  E-value=3.6e-27  Score=214.22  Aligned_cols=275  Identities=22%  Similarity=0.280  Sum_probs=231.2

Q ss_pred             HHHHHHHHHhhcCCC-hHHHHHHHHHHHHHHHHHHHHHccc-cccCCCCchhHHHHHHHHHHHHhhcceeccccchhHHH
Q 018894           25 IVICNKALISSLGFT-FATTLTSWHLLVTFCSLHVALWMKL-FEHKPFDPRAVMGFGVLNGISIGLLNLSLGFNSVGFYQ  102 (349)
Q Consensus        25 ~~~~~K~v~~~~~~~-~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~  102 (349)
                      ..++++.+.++.... +|+++++.|+....+.........+ .+.++.+++++.+.++++.++..+.+.+++|+|.++.+
T Consensus        15 ~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~   94 (303)
T PF08449_consen   15 YGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPKSRKIPLKKYAILSFLFFLASVLSNAALKYISYPTQI   94 (303)
T ss_pred             HHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccCCCcChHHHHHHHHHHHHHHHHHHHHHHHhCChHHHH
Confidence            445666666654334 7999999999999988877765554 55567788999999999999999999999999999999


Q ss_pred             HHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeecccc----c------chhHHHHHHHHHHHHHHHHHHHH
Q 018894          103 MTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDLQ----L------NVLGSVLSLLAVLTTCVAQIMTN  172 (349)
Q Consensus       103 ~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~~~----~------~~~G~~~~l~s~~~~a~~~v~~k  172 (349)
                      +++++.|+++++++.+++|+|+++++++++++.++|+++....+..    .      ...|+++.+++.++.|++.++.|
T Consensus        95 ~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~qe  174 (303)
T PF08449_consen   95 VFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVYQE  174 (303)
T ss_pred             HHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999998764421    1      12399999999999999999999


Q ss_pred             HHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhh-cccccccccccccCchhHHHHHHHHHHHHHHHHHHHHhhcccCcch
Q 018894          173 TIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLD-GLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVIGKTSPVT  251 (349)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  251 (349)
                      |..++++.++.+.++|.+.++.+..++.....+ ++......+. ...+..+..++..++.+.+.+...+..+++.||++
T Consensus       175 ~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~-~~~p~~~~~l~~~s~~~~~g~~~i~~~~~~~~al~  253 (303)
T PF08449_consen  175 KLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFI-SAHPSVLLYLLLFSLTGALGQFFIFYLIKKFSALT  253 (303)
T ss_pred             HHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchh
Confidence            999999999999999999999998887776522 2211111111 23344666777777777777787888899999999


Q ss_pred             hhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhcccc
Q 018894          252 YQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLE  300 (349)
Q Consensus       252 ~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~~~  300 (349)
                      .+++.++|.++++++++++|++++++.+|+|+++++.|..+|++.|+|+
T Consensus       254 ~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~  302 (303)
T PF08449_consen  254 TTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK  302 (303)
T ss_pred             hhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence            9999999999999999999999999999999999999999999877654

; GO: 0055085 transmembrane transport

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.96  E-value=1.3e-26  Score=209.91  Aligned_cols=271  Identities=18%  Similarity=0.089  Sum_probs=196.3

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHH
Q 018894            5 QKFQLGTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFDPRAVMGFGVLNGI   84 (349)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (349)
                      .+..+...++++.|....    ...|...++  ++ |..+.++|+.++.+++.++..  +.+.++.+++..+..++....
T Consensus         3 ~~~~l~~l~a~~~Wg~~~----~~~k~~~~~--~~-P~~~~~~R~~~a~l~l~~~~~--~~~~~~~~~~~~~~~~l~~~~   73 (295)
T PRK11689          3 QKATLIGLIAILLWSTMV----GLIRGVSES--LG-PVGGAAMIYSVSGLLLLLTVG--FPRLRQFPKRYLLAGGLLFVS   73 (295)
T ss_pred             cchhHHHHHHHHHHHHHH----HHHHHHHcc--CC-hHHHHHHHHHHHHHHHHHHcc--ccccccccHHHHHHHhHHHHH
Confidence            344555556666665443    577888873  33 899999999999988876532  122223333444444444556


Q ss_pred             HHhhcceecc----ccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeeccc-----------cc
Q 018894           85 SIGLLNLSLG----FNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDL-----------QL  149 (349)
Q Consensus        85 ~~~~~~~al~----~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~~-----------~~  149 (349)
                      +..+.+.+++    +.++..+.++.++.|+++++++++++|||++++++.++++++.|+.++..++.           ..
T Consensus        74 ~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~  153 (295)
T PRK11689         74 YEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIAS  153 (295)
T ss_pred             HHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhcccc
Confidence            6666666664    45777889999999999999999999999999999999999999998875432           12


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHH
Q 018894          150 NVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLS  229 (349)
Q Consensus       150 ~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (349)
                      +..|++++++++++||.|+++.||..++  .++.....   ..+.+.+.+.... ++...      ...+...+..++..
T Consensus       154 ~~~G~~~~l~aa~~~A~~~v~~k~~~~~--~~~~~~~~---~~~~~~l~~~~~~-~~~~~------~~~~~~~~~~l~~~  221 (295)
T PRK11689        154 NPLSYGLAFIGAFIWAAYCNVTRKYARG--KNGITLFF---ILTALALWIKYFL-SPQPA------MVFSLPAIIKLLLA  221 (295)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHhhccCC--CCchhHHH---HHHHHHHHHHHHH-hcCcc------ccCCHHHHHHHHHH
Confidence            3469999999999999999999998763  45655432   2223333322222 22111      11223334344455


Q ss_pred             HHHHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhh
Q 018894          230 CLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYC  296 (349)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~  296 (349)
                      ++.+...+..+++++|+.++.+++.+.+++|+++++++++++||++++.+++|+++++.|+.+....
T Consensus       222 ~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~  288 (295)
T PRK11689        222 AAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA  288 (295)
T ss_pred             HHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence            5556666788899999999999999999999999999999999999999999999999999887653

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.95  E-value=1.7e-25  Score=202.97  Aligned_cols=277  Identities=14%  Similarity=0.169  Sum_probs=194.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHH-HHH
Q 018894            8 QLGTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFDPRAVMGFGVLNG-ISI   86 (349)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~   86 (349)
                      ....+...++|.....    ..|...++  .+ |..+.++|+.++.+.+.++..+     ++.+++..+..+++.. ...
T Consensus         6 ~l~~l~~~~~Wg~~~~----~~k~~~~~--~~-p~~~~~~R~~~a~~~l~~~~~~-----~~~~~~~~~~~g~~~~~~~~   73 (299)
T PRK11453          6 GVLALLVVVVWGLNFV----VIKVGLHN--MP-PLMLAGLRFMLVAFPAIFFVAR-----PKVPLNLLLGYGLTISFGQF   73 (299)
T ss_pred             HHHHHHHHHHHhhhHH----HHHHHHhc--CC-HHHHHHHHHHHHHHHHHHHhcC-----CCCchHHHHHHHHHHHHHHH
Confidence            3444455555555554    55887763  33 9999999999987665554321     1223444555555433 344


Q ss_pred             hhcceeccc-cchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeecc---cccchhHHHHHHHHHH
Q 018894           87 GLLNLSLGF-NSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTD---LQLNVLGSVLSLLAVL  162 (349)
Q Consensus        87 ~~~~~al~~-~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~---~~~~~~G~~~~l~s~~  162 (349)
                      .+.+.++++ .+++.+.++.++.|+++.+++++++|||++++++.+++++++|+.++..++   .+.+..|+.+++++++
T Consensus        74 ~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aal  153 (299)
T PRK11453         74 AFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAF  153 (299)
T ss_pred             HHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHHH
Confidence            456678887 688999999999999999999999999999999999999999999887542   2234579999999999


Q ss_pred             HHHHHHHHHHHHHhhcC-CCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHHHHH-HHHHH
Q 018894          163 TTCVAQIMTNTIQKKFK-VSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVS-VNFST  240 (349)
Q Consensus       163 ~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  240 (349)
                      +|+.|.++.||..++.+ .+......+....+.+.+.......+++....... ...+...+..++..++++.. .+..+
T Consensus       154 ~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~l~i~~t~~~~~l~  232 (299)
T PRK11453        154 SWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSL-VTIDMTTILSLMYLAFVATIVGYGIW  232 (299)
T ss_pred             HHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhh-ccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999876432 22334444555444443333333333321110000 11223334444444444433 35567


Q ss_pred             HHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhc
Q 018894          241 FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCC  297 (349)
Q Consensus       241 ~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~  297 (349)
                      ++.+++.++.+.+.+.+++|+++.+++++++||++++.+++|+++++.|+.+..+.+
T Consensus       233 ~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~  289 (299)
T PRK11453        233 GTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL  289 (299)
T ss_pred             HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence            788999999999999999999999999999999999999999999999998876544

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.95  E-value=1.1e-25  Score=203.47  Aligned_cols=267  Identities=14%  Similarity=0.089  Sum_probs=198.0

Q ss_pred             HHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHccccc-cCCCCchhHHHHHHHH-HHHHhhcceec-cc
Q 018894           19 VISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFE-HKPFDPRAVMGFGVLN-GISIGLLNLSL-GF   95 (349)
Q Consensus        19 ~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~al-~~   95 (349)
                      .+.........|...++  .+ |..++++|+.++.++++++...++.+ ++++++++....+.+. ..+..+.+.+. ++
T Consensus        17 ~~iWg~~~~~~K~~~~~--~~-p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   93 (292)
T PRK11272         17 YIIWGSTYLVIRIGVES--WP-PLMMAGVRFLIAGILLLAFLLLRGHPLPTLRQWLNAALIGLLLLAVGNGMVTVAEHQN   93 (292)
T ss_pred             HHHHhhHHHHHHHHhcc--CC-HHHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence            33333355677888773  33 89999999999998877765443322 2233445555566554 35566778888 99


Q ss_pred             cchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeec-ccccchhHHHHHHHHHHHHHHHHHHHHHH
Q 018894           96 NSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVT-DLQLNVLGSVLSLLAVLTTCVAQIMTNTI  174 (349)
Q Consensus        96 ~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~-~~~~~~~G~~~~l~s~~~~a~~~v~~k~~  174 (349)
                      ++++.+.++.++.|+++++++.+ +|||++++++.|++++++|+.+...+ +.+.+..|++++++++++||.+.+..||.
T Consensus        94 ~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~~a~~~~~~~~~  172 (292)
T PRK11272         94 VPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASWAFGSVWSSRL  172 (292)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999999986 69999999999999999999987643 33455679999999999999999999997


Q ss_pred             HhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHH-HHHHHHHHHHhhcccCcchhh
Q 018894          175 QKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLI-SVSVNFSTFLVIGKTSPVTYQ  253 (349)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~s  253 (349)
                      .+  + ++.....+....+.+.+.+.....+.+..      ...+...+..++..+++ +...+..+++++++.++...+
T Consensus       173 ~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s  243 (292)
T PRK11272        173 PL--P-VGMMAGAAEMLAAGVVLLIASLLSGERLT------ALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALAT  243 (292)
T ss_pred             CC--C-cchHHHHHHHHHHHHHHHHHHHHcCCccc------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHH
Confidence            64  2 33445566666777666655443322111      01122233333333333 333466778899999999999


Q ss_pred             hhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhcc
Q 018894          254 VLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCS  298 (349)
Q Consensus       254 ~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~  298 (349)
                      .+.+++|+++.+++++++||++++.+++|+++++.|+.+.++.++
T Consensus       244 ~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~  288 (292)
T PRK11272        244 SYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999998876433

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.95  E-value=6.5e-26  Score=194.23  Aligned_cols=284  Identities=24%  Similarity=0.350  Sum_probs=243.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHcccc--c--cCCCCchh----HHHHH
Q 018894            8 QLGTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLF--E--HKPFDPRA----VMGFG   79 (349)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~--~--~~~~~~~~----~~~~~   79 (349)
                      +...++.+++|+++|+++.+++|+.-.  .+++|.+++.+++++-.++.....+..+.  +  +...+|+.    ..+.+
T Consensus        14 rV~~L~lVl~yY~~Si~Ltf~~~~~~~--~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPta   91 (349)
T KOG1443|consen   14 RVLTLALVLLYYFLSIGLTFYFKWLTK--NFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTA   91 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhc--CcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhh
Confidence            345566778999999999999999987  58889999999998888776665443222  2  23455654    44889


Q ss_pred             HHHHHHHhhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeecccccchhHHHHHHH
Q 018894           80 VLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDLQLNVLGSVLSLL  159 (349)
Q Consensus        80 ~~~~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~~~~~~~G~~~~l~  159 (349)
                      ++.++...+.|++++|++.+.+++.++++++|+.+++.++.-||+++.-.+-++++.+|+.+.++.+.+++..|..+..+
T Consensus        92 lata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv~~  171 (349)
T KOG1443|consen   92 LATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLVLA  171 (349)
T ss_pred             hhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhhcC---CCHHHHHHHhhHHHHHHHHHHHHhhhcccccccc--cc-ccc--CchhHHHHHHHHH
Q 018894          160 AVLTTCVAQIMTNTIQKKFK---VSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNV--FA-FKY--TPYVLFFIVLSCL  231 (349)
Q Consensus       160 s~~~~a~~~v~~k~~~~~~~---~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~--~~-~~~--~~~~~~~~~~~~~  231 (349)
                      ++++.+++..++|.++++.+   -+|....++..+...+.+++....+||+......  +. .+.  ....+..+..+|.
T Consensus       172 aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~g~  251 (349)
T KOG1443|consen  172 ASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLGGL  251 (349)
T ss_pred             HHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHHHH
Confidence            99999999999999998654   4788889999988888899998899987543211  11 122  2344556778888


Q ss_pred             HHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHH
Q 018894          232 ISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLY  293 (349)
Q Consensus       232 ~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~  293 (349)
                      .+++....-+....+++..+.++.+..+.+++.+++.++.+++++..+|.|..++..|+.++
T Consensus       252 laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~  313 (349)
T KOG1443|consen  252 LAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH  313 (349)
T ss_pred             HHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence            88888888899999999999999999999999999999999999999999999999999999

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.95  E-value=2.1e-25  Score=201.74  Aligned_cols=256  Identities=13%  Similarity=0.083  Sum_probs=188.2

Q ss_pred             HHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHhhcceeccccchhHHH
Q 018894           23 VSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFDPRAVMGFGVLNGISIGLLNLSLGFNSVGFYQ  102 (349)
Q Consensus        23 ~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~  102 (349)
                      .......|+..+.  ++ |..+.++|++++.+++.++...++.+.++++++..+..+++.+..+.+.+.+++++|++.++
T Consensus        25 ~~~~~~~K~~~~~--~~-~~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~  101 (293)
T PRK10532         25 QSGASLAKSLFPL--VG-APGVTALRLALGTLILIAIFKPWRLRFAKEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAV  101 (293)
T ss_pred             HhhHHHHHHHHHH--cC-HHHHHHHHHHHHHHHHHHHHhHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHH
Confidence            3444578999884  33 88899999999998887665433333344556667777887777788889999999999999


Q ss_pred             HHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeecc---cccchhHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 018894          103 MTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTD---LQLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFK  179 (349)
Q Consensus       103 ~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~---~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~  179 (349)
                      ++..+.|+++++++    +||++..  .++.+++.|+.++...+   .+.+..|++++++++++||.|.+..||..++  
T Consensus       102 ~l~~t~Pi~~~ll~----~~~~~~~--~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~--  173 (293)
T PRK10532        102 ALEFTGPLAVALFS----SRRPVDF--VWVVLAVLGLWFLLPLGQDVSHVDLTGAALALGAGACWAIYILSGQRAGAE--  173 (293)
T ss_pred             HHHHHHHHHHHHHh----cCChHHH--HHHHHHHHHHheeeecCCCcccCChHHHHHHHHHHHHHHHHHHHHHHHhcc--
Confidence            99999999999886    3555544  45667789988765322   2335679999999999999999999999874  


Q ss_pred             CCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHHH-HHHHHHHHHhhcccCcchhhhhhhh
Q 018894          180 VSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLIS-VSVNFSTFLVIGKTSPVTYQVLGHL  258 (349)
Q Consensus       180 ~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~s~~~~~  258 (349)
                      .++... .+...++++++.+.....+.  .      ...+...+...+..++++ ...+..+++++++.++.+++++.++
T Consensus       174 ~~~~~~-~~~~~~~~~~l~~~~~~~~~--~------~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l  244 (293)
T PRK10532        174 HGPATV-AIGSLIAALIFVPIGALQAG--E------ALWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSM  244 (293)
T ss_pred             CCchHH-HHHHHHHHHHHHHHHHHccC--c------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHh
Confidence            355554 44555666666554433221  0      011222222222333333 2335577889999999999999999


Q ss_pred             hHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhcc
Q 018894          259 KTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCS  298 (349)
Q Consensus       259 ~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~  298 (349)
                      +|+++.+++++++||++++.+++|+++++.|++.+.+..+
T Consensus       245 ~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~  284 (293)
T PRK10532        245 EPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIR  284 (293)
T ss_pred             HHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCC
Confidence            9999999999999999999999999999999999976543

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.95  E-value=1.4e-25  Score=199.83  Aligned_cols=252  Identities=15%  Similarity=0.086  Sum_probs=197.4

Q ss_pred             HHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHH-HHHHHHhhcceeccccchhHHHHH
Q 018894           26 VICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFDPRAVMGFGV-LNGISIGLLNLSLGFNSVGFYQMT  104 (349)
Q Consensus        26 ~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~al~~~~~s~~~~l  104 (349)
                      ....|+..++  ...|..+.+.|++.+.+++.+....+   +++.++++....+. ...+++.+.+.|+++++++.+.++
T Consensus         5 ~~~~k~~~~~--~~~~~~~~~~r~~~~~l~l~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii   79 (260)
T TIGR00950         5 GVVIGQYLEG--QVPLYFAVFRRLIFALLLLLPLLRRR---PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALL   79 (260)
T ss_pred             HHHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHHhc---cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHH
Confidence            4567888873  45588999999999988877765544   33445555555554 456788899999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeecc-cccchhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHH
Q 018894          105 KLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTD-LQLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSST  183 (349)
Q Consensus       105 ~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~-~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~  183 (349)
                      .++.|+++++++.+++|||++++++.+++++++|+.+...++ .+.+..|+.++++++++|+.+.+..|+..++.+.++.
T Consensus        80 ~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~  159 (260)
T TIGR00950        80 LYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELL  159 (260)
T ss_pred             HhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHH
Confidence            999999999999999999999999999999999999876543 3455689999999999999999999999885544455


Q ss_pred             HHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHH-HHHHHHHHHHhhcccCcchhhhhhhhhHHH
Q 018894          184 QLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLI-SVSVNFSTFLVIGKTSPVTYQVLGHLKTCL  262 (349)
Q Consensus       184 ~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~  262 (349)
                      ....+.+..+.+++.+.....+.+..        .+...+..++..+++ ....+..+++++++.++.+.+.+.+++|++
T Consensus       160 ~~~~~~~~~~~~~l~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~  231 (260)
T TIGR00950       160 QFTGWVLLLGALLLLPFAWFLGPNPQ--------ALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLV  231 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCC--------cchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Confidence            55556677777777666543332111        122233333333333 344567788899999999999999999999


Q ss_pred             HHHHHHHhcCCCCchhhhhhHHHHHHHH
Q 018894          263 VLAFGYVLLHDPFSWRNILGILIAVIGM  290 (349)
Q Consensus       263 ~~~~~~~~~~e~~t~~~~~G~~lii~g~  290 (349)
                      +.+++++++||+++..+++|+++++.|+
T Consensus       232 ~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       232 ALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            9999999999999999999999999886

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.95  E-value=2.5e-25  Score=201.58  Aligned_cols=258  Identities=11%  Similarity=0.086  Sum_probs=182.0

Q ss_pred             HHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHcccc-cc---CCCCchhH---HHHHHHHHHHHhhcceeccccch
Q 018894           26 VICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLF-EH---KPFDPRAV---MGFGVLNGISIGLLNLSLGFNSV   98 (349)
Q Consensus        26 ~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~-~~---~~~~~~~~---~~~~~~~~~~~~~~~~al~~~~~   98 (349)
                      ....|.. .  +.+ |..+.++|++++.+++.++...++. +.   +.++++.+   ...++..+.++.+.+++++++++
T Consensus        24 ~~~~k~~-~--~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~   99 (296)
T PRK15430         24 PAYFKLI-Y--YVP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHM   99 (296)
T ss_pred             HHHHHHh-c--CCC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCch
Confidence            3455765 4  334 8999999999998866655432211 11   11133332   22345566788999999999999


Q ss_pred             hHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeecccccchhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 018894           99 GFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDLQLNVLGSVLSLLAVLTTCVAQIMTNTIQKKF  178 (349)
Q Consensus        99 s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~  178 (349)
                      +.+.++.++.|+++++++++++|||++++++.++++++.|+.++..++.+.    ..++++++++||.|.+..||..++.
T Consensus       100 ~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~----~~~~l~aa~~~a~~~i~~r~~~~~~  175 (296)
T PRK15430        100 LEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSL----PIIALGLAFSFAFYGLVRKKIAVEA  175 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCc----cHHHHHHHHHHHHHHHHHHhcCCCC
Confidence            999999999999999999999999999999999999999999876433222    2468889999999999999975422


Q ss_pred             CCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHHHHHHHHHHHHhhcccCcchhhhhhhh
Q 018894          179 KVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHL  258 (349)
Q Consensus       179 ~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~  258 (349)
                      ..+......+....+.+...+   ..+....   ... ......+..++..++.+...+..+++++++.+|...+.+.++
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---~~~-~~~~~~~~~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l  248 (296)
T PRK15430        176 QTGMLIETMWLLPVAAIYLFA---IADSSTS---HMG-QNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYI  248 (296)
T ss_pred             chhHHHHHHHHHHHHHHHHHH---HccCCcc---ccc-CCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence            223333334444443332211   1111100   000 111112233444444555667888999999999999999999


Q ss_pred             hHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhcc
Q 018894          259 KTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCS  298 (349)
Q Consensus       259 ~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~  298 (349)
                      +|+++.+++++++||++++.+++|++++++|+.+......
T Consensus       249 ~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~~  288 (296)
T PRK15430        249 GPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAI  288 (296)
T ss_pred             HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999888887765433

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.94  E-value=2.8e-25  Score=181.91  Aligned_cols=287  Identities=21%  Similarity=0.269  Sum_probs=256.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHhhcce
Q 018894           12 VGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFDPRAVMGFGVLNGISIGLLNL   91 (349)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (349)
                      ..+.+.|+.+++.+.+.||++++..+|+..+.+.+.|...+.+-+..+.+.|..+.+..+.|.|++.+++...+.+....
T Consensus         8 ~~~~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR~t~aK~WfpiSfLLv~MIyt~SK   87 (309)
T COG5070           8 LTASLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFRLTKAKKWFPISFLLVVMIYTSSK   87 (309)
T ss_pred             chHHHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhheehhhhhhhcCHHHHHHHHHHhccc
Confidence            45778899999999999999999999999999999999999998888888887777788889999999999999999999


Q ss_pred             eccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeecccc--------cchhHHHHHHHHHHH
Q 018894           92 SLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDLQ--------LNVLGSVLSLLAVLT  163 (349)
Q Consensus        92 al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~~~--------~~~~G~~~~l~s~~~  163 (349)
                      +++|++++.++++++++.+.++....+++|.|++.....+.++.+..-....++|.+        .| -|++|+..++++
T Consensus        88 sLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN-~GY~Wm~~Ncls  166 (309)
T COG5070          88 SLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILN-PGYLWMFTNCLS  166 (309)
T ss_pred             ceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccC-CceEEEehhhHh
Confidence            999999999999999999999999999999999999999999999999998887753        23 499999999999


Q ss_pred             HHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHHHHHHHHHHHHh
Q 018894          164 TCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLV  243 (349)
Q Consensus       164 ~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (349)
                      .+.+....|+..+-.+......++|.++.+.++++....+.|+|.+..  .........+.....+|++++...+..-|+
T Consensus       167 saafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n--~annl~~d~l~am~ISgl~svgiSy~saWc  244 (309)
T COG5070         167 SAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGN--LANNLSVDSLMAMFISGLCSVGISYCSAWC  244 (309)
T ss_pred             HHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcch--hhcCCChHHHHHHHHHHHHHhhhhhcccee
Confidence            999999999988766778889999999999999999988888765531  122233344667888999999999999999


Q ss_pred             hcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhccccc
Q 018894          244 IGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLES  301 (349)
Q Consensus       244 ~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~~~~  301 (349)
                      ++..++++.++++.+......+.|.++|+|+.+...+..+.+-.++..+|...+.+++
T Consensus       245 vrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~  302 (309)
T COG5070         245 VRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQ  302 (309)
T ss_pred             EeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999998766543

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.93  E-value=7.1e-27  Score=196.88  Aligned_cols=302  Identities=21%  Similarity=0.230  Sum_probs=259.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhh--cCCChHHHHHHHHHHHHHHHHHHHHHcc-----ccccCCCC-----chh
Q 018894            7 FQLGTVGALSLSVISSVSIVICNKALISS--LGFTFATTLTSWHLLVTFCSLHVALWMK-----LFEHKPFD-----PRA   74 (349)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~K~v~~~--~~~~~p~~~~~~r~~~~~l~l~~~~~~~-----~~~~~~~~-----~~~   74 (349)
                      +..++--+...|...++++.+.||++++.  ...+.|.+++++|.++...++..+.+..     .++.+..+     .+.
T Consensus        25 n~~~v~~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~  104 (347)
T KOG1442|consen   25 NAKQVDSAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQ  104 (347)
T ss_pred             hhhchhhhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHh
Confidence            45556667788999999999999999986  3456699999999999988877764422     22222222     367


Q ss_pred             HHHHHHHHHHHHhhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeecc---cccch
Q 018894           75 VMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTD---LQLNV  151 (349)
Q Consensus        75 ~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~---~~~~~  151 (349)
                      ..++++.+.++..+.+++++|.+++.+++=++++.+|+++++++++|+|-+..-..+.+++++|..+-+-.|   ...++
T Consensus       105 vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls~  184 (347)
T KOG1442|consen  105 VLPLSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLSW  184 (347)
T ss_pred             hcchhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCccch
Confidence            889999999999999999999999999999999999999999999999999999999999999999988655   45678


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHH
Q 018894          152 LGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCL  231 (349)
Q Consensus       152 ~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (349)
                      .|.++++.++++-|...+++||.....+..-+.+..|++..+.+.++|... ..++.+....+++.+...+|.++..+|+
T Consensus       185 ~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~-lnge~~~v~~~~~l~a~~Fw~~mtLsgl  263 (347)
T KOG1442|consen  185 IGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLI-LNGEFQAVVGFPHLPAIKFWILMTLSGL  263 (347)
T ss_pred             hhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHH-HcchHHHHcCcccchHHHHHHHHHHHHH
Confidence            999999999999999999999988776778899999999999988887765 4555554444555666778889999999


Q ss_pred             HHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhccccccccccccc
Q 018894          232 ISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLESQQKASETS  309 (349)
Q Consensus       232 ~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~~~~~~~~~~~~  309 (349)
                      ++|.+++.+.+-+|.++|.++.+..+.+...+.+++...++|..+..-|-|-.++++|...|++.|..++++..++++
T Consensus       264 fgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~~~~~s  341 (347)
T KOG1442|consen  264 FGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKASAQRS  341 (347)
T ss_pred             HHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhhccCCC
Confidence            999999999999999999999999999999999999999999999999999999999999999988877665555443

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.89  E-value=1.1e-21  Score=176.54  Aligned_cols=260  Identities=14%  Similarity=0.094  Sum_probs=177.1

Q ss_pred             HHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHcc--cc--ccCCCCch-hHHHHHHHHHHHHhhcceeccc
Q 018894           21 SSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMK--LF--EHKPFDPR-AVMGFGVLNGISIGLLNLSLGF   95 (349)
Q Consensus        21 ~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~--~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~al~~   95 (349)
                      +......+.|...++   ..+  ..+.+.....+++.++...+  ..  +..+.++. .....++....+..+.+.++++
T Consensus        12 ~~a~~~~~~k~~~~~---~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~   86 (281)
T TIGR03340        12 MHAGWNLMAKSHADK---EPD--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQAYHH   86 (281)
T ss_pred             HHHHHHHHHhhcCCc---hhH--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            333445567766553   223  23556666665555554332  11  11122222 2333345566788899999999


Q ss_pred             cchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeecc-cccchhHHHHHHHHHHHHHHHHHHHHHH
Q 018894           96 NSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTD-LQLNVLGSVLSLLAVLTTCVAQIMTNTI  174 (349)
Q Consensus        96 ~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~-~~~~~~G~~~~l~s~~~~a~~~v~~k~~  174 (349)
                      .+++.+..+.++.|+++++++++++|||++++++.|+.+++.|+.++..++ ...+..|+.++++++++|+.|.+..|+.
T Consensus        87 ~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~~i~~k~~  166 (281)
T TIGR03340        87 ADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIYSLSDKAA  166 (281)
T ss_pred             CChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhhhcccc
Confidence            999999999999999999999999999999999999999999999876543 2334568889999999999999998887


Q ss_pred             HhhcCCCHHHHHHHhhHHHHHHH-HHHHHhh--hcccccccccccccCchhHHHHHHHHHHHHHHHHHHHHhhcccCcch
Q 018894          175 QKKFKVSSTQLLYQSCPYQALTL-FIIGPFL--DGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVIGKTSPVT  251 (349)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~i~l-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  251 (349)
                      .++.  ++..........+.+.. .+.....  .++..    . .......+..+...++.+...+..+++++++.++.+
T Consensus       167 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~  239 (281)
T TIGR03340       167 ALGV--PAFYSALGYLGIGFLAMGWPFLLLYLKRHGRS----M-FPYARQILPSATLGGLMIGGAYALVLWAMTRLPVAT  239 (281)
T ss_pred             ccch--hcccccHHHHHHHHHHHHHHHHHHHHHHhccc----h-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceE
Confidence            5422  22211111111122111 1211111  11100    0 011122334455555556566778889999999999


Q ss_pred             hhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHH
Q 018894          252 YQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVL  292 (349)
Q Consensus       252 ~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l  292 (349)
                      .+.+.+++|+++.+++++++||+++..+++|++++++|+.+
T Consensus       240 ~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       240 VVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             EEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            99999999999999999999999999999999999999865

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.86  E-value=1.3e-18  Score=157.11  Aligned_cols=263  Identities=17%  Similarity=0.148  Sum_probs=187.2

Q ss_pred             HHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHcccc-cc-CCCCchhHHH-HHHHHHHHHhhcceecccc
Q 018894           20 ISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLF-EH-KPFDPRAVMG-FGVLNGISIGLLNLSLGFN   96 (349)
Q Consensus        20 ~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~-~~-~~~~~~~~~~-~~~~~~~~~~~~~~al~~~   96 (349)
                      ..........|....+  ...+....+.|...+.++.......++. +. ...+++.... .++....+..+.+.+++++
T Consensus        17 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (292)
T COG0697          17 LLWGLSFIALKLAVES--LDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFLLLFLALKYT   94 (292)
T ss_pred             HHHHHHHHHHHHHhcc--cCChHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            3333344455555552  2335566666998888874444433321 11 1222223333 3455667888999999999


Q ss_pred             chhHHHHHhhhHHHHHHHHHH-HHhccccchhhhHHHHHhhhhheeeeeccccc---chhHHHHHHHHHHHHHHHHHHHH
Q 018894           97 SVGFYQMTKLAIIPCTILLET-LFFRKKFSRNIQLSLVILLVGVGIATVTDLQL---NVLGSVLSLLAVLTTCVAQIMTN  172 (349)
Q Consensus        97 ~~s~~~~l~~~~pi~~~~l~~-~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~~~~---~~~G~~~~l~s~~~~a~~~v~~k  172 (349)
                      +++.++.+.++.|+++.++++ +++|||++++++.++.+++.|+.++..++...   +..|+.+++.+++++|.+.+..|
T Consensus        95 ~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~~~a~~~~~~~  174 (292)
T COG0697          95 SASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWALYTALVK  174 (292)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999997 77799999999999999999999999866443   35899999999999999999999


Q ss_pred             HHHhhcCCCHHHHHH-HhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHHHH-HHHHHHHHhhcccCcc
Q 018894          173 TIQKKFKVSSTQLLY-QSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISV-SVNFSTFLVIGKTSPV  250 (349)
Q Consensus       173 ~~~~~~~~~~~~~~~-~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~  250 (349)
                      +..   +.++..... +...  ...++..........       .......+......++++. ..+...++.+++.++.
T Consensus       175 ~~~---~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~  242 (292)
T COG0697         175 RLS---RLGPVTLALLLQLL--LALLLLLLFFLSGFG-------APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGAS  242 (292)
T ss_pred             Hhc---CCChHHHHHHHHHH--HHHHHHHHHHhcccc-------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCch
Confidence            987   234554444 3322  111111111111100       1222333444444454444 4577788899999999


Q ss_pred             hhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhh
Q 018894          251 TYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYC  296 (349)
Q Consensus       251 ~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~  296 (349)
                      ..+...+++|+.+.+.++++++|+++..+++|+++++.|+.+.+..
T Consensus       243 ~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         243 LVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            9999999999999999999999999999999999999999998765

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.86  E-value=1.2e-19  Score=151.97  Aligned_cols=252  Identities=16%  Similarity=0.131  Sum_probs=200.0

Q ss_pred             HHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHhhcceeccccchhHHHHHhhh
Q 018894           28 CNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFDPRAVMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLA  107 (349)
Q Consensus        28 ~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~  107 (349)
                      +.|.++-..+   |...+++|..++.+++..+.+-.+++..+.+|+.....|+..+.++.++|.+++.+|.+++..+..+
T Consensus        30 ~Ak~LFP~vG---~~g~t~lRl~~aaLIll~l~RPwr~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF~  106 (292)
T COG5006          30 FAKSLFPLVG---AAGVTALRLAIAALILLALFRPWRRRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEFT  106 (292)
T ss_pred             HHHHHccccC---hhhHHHHHHHHHHHHHHHHhhHHHhccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhc
Confidence            4466665434   8899999999999999888776666777888999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeecc---cccchhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHH
Q 018894          108 IIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTD---LQLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQ  184 (349)
Q Consensus       108 ~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~---~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~  184 (349)
                      .|+.++.++.      -+.++.+.+.+.+.|+.+....+   .+.|+.|..+++.++.||+.|.+..||..+  ..+...
T Consensus       107 GPL~vA~~~s------Rr~~d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~--~~~g~~  178 (292)
T COG5006         107 GPLAVALLSS------RRLRDFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRAGR--AEHGTA  178 (292)
T ss_pred             cHHHHHHHhc------cchhhHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhcc--cCCCch
Confidence            9999998754      34456667777788888765432   466889999999999999999999999986  335666


Q ss_pred             HHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHHHHHH-HHHHHHhhcccCcchhhhhhhhhHHHH
Q 018894          185 LLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSV-NFSTFLVIGKTSPVTYQVLGHLKTCLV  263 (349)
Q Consensus       185 ~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~s~~~~~~~v~~  263 (349)
                      -+..-+..++++.+|+.....++        .-.++..+...+..++++... +..-..++++.++.+.+++..++|.++
T Consensus       179 g~a~gm~vAaviv~Pig~~~ag~--------~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~a  250 (292)
T COG5006         179 GVAVGMLVAALIVLPIGAAQAGP--------ALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALA  250 (292)
T ss_pred             HHHHHHHHHHHHHhhhhhhhcch--------hhcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHH
Confidence            66667777877777766533321        113444555555555555443 334556789999999999999999999


Q ss_pred             HHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhcc
Q 018894          264 LAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCS  298 (349)
Q Consensus       264 ~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~  298 (349)
                      .+.+++++||.+|+.||+|++.++.+..-.++..+
T Consensus       251 Al~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~  285 (292)
T COG5006         251 ALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTAR  285 (292)
T ss_pred             HHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccC
Confidence            99999999999999999999999999887665433

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.85  E-value=3e-19  Score=153.62  Aligned_cols=261  Identities=18%  Similarity=0.149  Sum_probs=216.9

Q ss_pred             CCChHHHHHHHHHHHHHHHHHHHHHcc-ccccCCCCchhHHHHHHHHHHHHhhcceeccccchhHHHHHhhhHHHHHHHH
Q 018894           37 GFTFATTLTSWHLLVTFCSLHVALWMK-LFEHKPFDPRAVMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILL  115 (349)
Q Consensus        37 ~~~~p~~~~~~r~~~~~l~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l  115 (349)
                      .|..|.++.++|-+.+.++-..+...+ .....+.+|.++...++...+...+.+.|++|++-++..+-+++..+-+++.
T Consensus        47 rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlm  126 (327)
T KOG1581|consen   47 RFEHSLFLVFCQRLVALLVSYAMLKWWKKELSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLM  126 (327)
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHhcccccCCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHH
Confidence            467799999999999998876654433 3344567788888899999999999999999999999999999999999999


Q ss_pred             HHHHhccccchhhhHHHHHhhhhheeeeecc---------cccchhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHH
Q 018894          116 ETLFFRKKFSRNIQLSLVILLVGVGIATVTD---------LQLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLL  186 (349)
Q Consensus       116 ~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~---------~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~  186 (349)
                      ..++.|+|++.+++++..++.+|+.+....+         ...++.|+.++..+-+..++-+...+++.+++++++++++
T Consensus       127 g~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM  206 (327)
T KOG1581|consen  127 GTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMM  206 (327)
T ss_pred             HHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHH
Confidence            9999999999999999999999999876531         1245789999999999999999999999999999999999


Q ss_pred             HHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHHHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHH
Q 018894          187 YQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAF  266 (349)
Q Consensus       187 ~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~  266 (349)
                      ++.++++++..............+..  .....+..++-+...+.++.+-+...++.+++.|+.+.+.++.+|.++++.+
T Consensus       207 ~~vNLf~~i~~~~~li~qg~~~~av~--F~~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~l  284 (327)
T KOG1581|consen  207 FGVNLFSAILNGTYLILQGHLLPAVS--FIKEHPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIML  284 (327)
T ss_pred             HHHHHHHHHHHHHhhhcCCCCchHHH--HHHcChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHH
Confidence            99999999888766443333222211  1223455556666666666666888888999999999999999999999999


Q ss_pred             HHHhcCCCCchhhhhhHHHHHHHHHHHhhhccc
Q 018894          267 GYVLLHDPFSWRNILGILIAVIGMVLYSYCCSL  299 (349)
Q Consensus       267 ~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~~  299 (349)
                      +.+.+++++++.||+|..+++.|..+-...+.+
T Consensus       285 S~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~  317 (327)
T KOG1581|consen  285 SCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK  317 (327)
T ss_pred             HHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence            999999999999999988888887765555444

>TIGR00688 rarD rarD protein

Probab=99.85  E-value=2.7e-19  Score=158.94  Aligned_cols=243  Identities=13%  Similarity=0.094  Sum_probs=163.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHH-cccc-----ccCCCCch----hHH
Q 018894            7 FQLGTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALW-MKLF-----EHKPFDPR----AVM   76 (349)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~-~~~~-----~~~~~~~~----~~~   76 (349)
                      .......+.++|...+.    ..|. ..  +.+ |..+.++|++++.+++.++.. .+++     +.++.+++    ...
T Consensus         3 g~~~~i~a~~~wg~~~~----~~k~-~~--~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (256)
T TIGR00688         3 GIIVSLLASFLFGYMYY----YSKL-LK--PLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLL   74 (256)
T ss_pred             cHHHHHHHHHHHHHHHH----HHHH-hc--cCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHH
Confidence            34445555555555554    5677 44  233 899999999999887665432 2211     11111122    234


Q ss_pred             HHHHHHHHHHhhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeecccccchhHHHH
Q 018894           77 GFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDLQLNVLGSVL  156 (349)
Q Consensus        77 ~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~~~~~~~G~~~  156 (349)
                      ..+++.+.+..+.++++++++++.++++.++.|+++++++++++|||++++++.+++++++|+.++..++.+.+    .+
T Consensus        75 ~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~  150 (256)
T TIGR00688        75 LCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----WE  150 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----HH
Confidence            45666778889999999999999999999999999999999999999999999999999999997754322221    35


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHHHHHH
Q 018894          157 SLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSV  236 (349)
Q Consensus       157 ~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (349)
                      +++++++||.|.+..||..++   +........ ....+...+... ..++.. ...   ......+..++..++.+.+.
T Consensus       151 ~l~aa~~~a~~~i~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~-~~~~~~-~~~---~~~~~~~~~l~~~g~~t~i~  221 (256)
T TIGR00688       151 ALVLAFSFTAYGLIRKALKNT---DLAGFCLET-LSLMPVAIYYLL-QTDFAT-VQQ---TNPFPIWLLLVLAGLITGTP  221 (256)
T ss_pred             HHHHHHHHHHHHHHHhhcCCC---CcchHHHHH-HHHHHHHHHHHH-HhccCc-ccc---cCchhHHHHHHHHHHHHHHH
Confidence            788999999999999997652   222222111 111111111111 111111 000   01112344445555556667


Q ss_pred             HHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHh
Q 018894          237 NFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVL  270 (349)
Q Consensus       237 ~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~  270 (349)
                      +..++.++++.++.+.+...+++|+++.+++.++
T Consensus       222 ~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       222 LLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            8888999999999999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.84  E-value=2.1e-19  Score=152.35  Aligned_cols=282  Identities=20%  Similarity=0.252  Sum_probs=217.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhh-----cCCChHHHHHHHHHHHHHHHHHHHHHcccccc----------------CCCCchh
Q 018894           16 SLSVISSVSIVICNKALISS-----LGFTFATTLTSWHLLVTFCSLHVALWMKLFEH----------------KPFDPRA   74 (349)
Q Consensus        16 ~~~~~~~~~~~~~~K~v~~~-----~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~----------------~~~~~~~   74 (349)
                      ++....++..+++.||.-+.     -++++|+..+..-++.-++++.++...|++..                ++.+...
T Consensus         9 ~imvvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~l   88 (372)
T KOG3912|consen    9 LIMVVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVL   88 (372)
T ss_pred             hhhhhhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcce
Confidence            34556677778899998664     24788999986666666566666654432211                1334456


Q ss_pred             HHHHHHHHHHHHhhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeeccc-------
Q 018894           75 VMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDL-------  147 (349)
Q Consensus        75 ~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~~-------  147 (349)
                      +++.++|...+..+.+.++.+++++.+++++....+||.+++.-+++++++.++|+++.....|++++...|.       
T Consensus        89 fl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~  168 (372)
T KOG3912|consen   89 FLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPY  168 (372)
T ss_pred             ecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCc
Confidence            7778999999999999999999999999999999999999999999999999999999999999998875421       


Q ss_pred             ---ccchhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhh----cccc--cccccccc-
Q 018894          148 ---QLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLD----GLLT--NKNVFAFK-  217 (349)
Q Consensus       148 ---~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~----~~~~--~~~~~~~~-  217 (349)
                         +.-..|+.+.+++.+.-|.+.++.+|..++.+++|.+...|..++|.+++-.......    +...  ++...-.| 
T Consensus       169 ~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~  248 (372)
T KOG3912|consen  169 TDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDW  248 (372)
T ss_pred             cccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhH
Confidence               2235799999999999999999999999999999999999999999766544332221    1000  01100001 


Q ss_pred             --------cCchhHHHHHHHHHHHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHH
Q 018894          218 --------YTPYVLFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIG  289 (349)
Q Consensus       218 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g  289 (349)
                              ..+.....+....+....+|+.-....|..++++-.++..++..+..+++.....|.+...|+.|.++.+.|
T Consensus       249 ~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~G  328 (372)
T KOG3912|consen  249 GDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMG  328 (372)
T ss_pred             HHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence                    122233333333343445677777778999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhc
Q 018894          290 MVLYSYCC  297 (349)
Q Consensus       290 ~~l~~~~~  297 (349)
                      .++|+-.-
T Consensus       329 i~lY~~il  336 (372)
T KOG3912|consen  329 IILYNQIL  336 (372)
T ss_pred             HHHHHHHH
Confidence            99998543

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.83  E-value=5.4e-18  Score=150.00  Aligned_cols=285  Identities=19%  Similarity=0.175  Sum_probs=222.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCh-HHHHHHHHHHHHHHHHHHHHHcccc---cc--CC---------CCchh
Q 018894           10 GTVGALSLSVISSVSIVICNKALISSLGFTF-ATTLTSWHLLVTFCSLHVALWMKLF---EH--KP---------FDPRA   74 (349)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~K~v~~~~~~~~-p~~~~~~r~~~~~l~l~~~~~~~~~---~~--~~---------~~~~~   74 (349)
                      .-...+++..+...++.++.|+.-.+.+..+ |.+..++--++-.+++.....+..+   ++  +.         .+..+
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk   94 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK   94 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence            3334555666777888888899887654444 6666666556655555444332211   11  11         11234


Q ss_pred             HHHHHHHHHHHHhhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeec---c-----
Q 018894           75 VMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVT---D-----  146 (349)
Q Consensus        75 ~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~---~-----  146 (349)
                      +...+++|++.+.+.+.++.+.+++++++...+..+.|+++..++++||++++||.++++.+.|+.+...+   +     
T Consensus        95 ~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~  174 (345)
T KOG2234|consen   95 VSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKS  174 (345)
T ss_pred             HHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccC
Confidence            55568899998889999999999999999999999999999999999999999999999999999988731   1     


Q ss_pred             ---cccchhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhH
Q 018894          147 ---LQLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVL  223 (349)
Q Consensus       147 ---~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (349)
                         .+..+.|....+.++++.++..++.+|++|+.+.+-+........+|.++.+......++.......+...++...|
T Consensus       175 ~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~vw  254 (345)
T KOG2234|consen  175 ESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIVW  254 (345)
T ss_pred             CCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHHHH
Confidence               22346899999999999999999999999988888888888888888888877666555443333445556777788


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhcc
Q 018894          224 FFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCS  298 (349)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~  298 (349)
                      .+++..++.+.    ..-..+|+.+...-.....+..+++.+.++.+++.++|....+|..+++.++.+|+..+.
T Consensus       255 ~vVl~~a~gGL----lvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~  325 (345)
T KOG2234|consen  255 LVVLLNAVGGL----LVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPA  325 (345)
T ss_pred             HHHHHHhccch----hHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCc
Confidence            88888887773    333457999999999999999999999999999999999999999999999999994443

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.82  E-value=2e-20  Score=156.55  Aligned_cols=267  Identities=13%  Similarity=0.160  Sum_probs=214.2

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHhhcceecccc
Q 018894           17 LSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFDPRAVMGFGVLNGISIGLLNLSLGFN   96 (349)
Q Consensus        17 ~~~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~   96 (349)
                      +.-.+.++.++.+.++..+ +.+.|...+++.+..-.++..++...|+ +.-+..|++++.+++...=++++...|.||+
T Consensus        25 iLSL~~t~~a~tss~la~k-~iN~Pt~QtFl~Y~LLalVY~~~~~fR~-~~~~~~~~hYilla~~DVEaNy~vV~AyQyT  102 (336)
T KOG2766|consen   25 ILSLLITSTAFTSSELARK-GINAPTSQTFLNYVLLALVYGPIMLFRR-KYIKAKWRHYILLAFVDVEANYFVVKAYQYT  102 (336)
T ss_pred             HHHHHHHcchhhhHHHHhc-cCCCccHHHHHHHHHHHHHHhhHHHhhh-HHHHHHHHHhhheeEEeecccEEEeeehhhc
Confidence            3344555667788888875 5777888888888777777666665554 4445567888889999888889999999999


Q ss_pred             chhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeecc--------cccchhHHHHHHHHHHHHHHHH
Q 018894           97 SVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTD--------LQLNVLGSVLSLLAVLTTCVAQ  168 (349)
Q Consensus        97 ~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~--------~~~~~~G~~~~l~s~~~~a~~~  168 (349)
                      +......+.+-..+.+.+++|+++|.|..+.++.|++++.+|+.+++.+|        ......|+++.++++-+||..+
T Consensus       103 smtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSN  182 (336)
T KOG2766|consen  103 SMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSN  182 (336)
T ss_pred             chHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeeecc
Confidence            99999999999999999999999999999999999999999999988744        2234579999999999999999


Q ss_pred             HHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHHHHHHHHHHHHhhcccC
Q 018894          169 IMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVIGKTS  248 (349)
Q Consensus       169 v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (349)
                      +..+.+.|  +.|..+++.+..++|+++..+- ++.+...    .....|+..+...+. ..+.-|+.+-..-..+|..|
T Consensus       183 v~EEflvk--n~d~~elm~~lgLfGaIIsaIQ-~i~~~~~----~~tl~w~~~i~~yl~-f~L~MFllYsl~pil~k~~~  254 (336)
T KOG2766|consen  183 VSEEFLVK--NADRVELMGFLGLFGAIISAIQ-FIFERHH----VSTLHWDSAIFLYLR-FALTMFLLYSLAPILIKTNS  254 (336)
T ss_pred             ccHHHHHh--cCcHHHHHHHHHHHHHHHHHHH-Hhhhccc----eeeEeehHHHHHHHH-HHHHHHHHHHhhHHheecCC
Confidence            99999999  7799999999999999999887 4454321    122333333333322 44444554555556789999


Q ss_pred             cchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhh
Q 018894          249 PVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSY  295 (349)
Q Consensus       249 a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~  295 (349)
                      ++...+--.....+++++  ..||-+.+|...+..+.+.+|.++|..
T Consensus       255 aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~  299 (336)
T KOG2766|consen  255 ATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYST  299 (336)
T ss_pred             ceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeec
Confidence            999999889999999999  567888999999999999999999953

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.82  E-value=9e-19  Score=145.00  Aligned_cols=255  Identities=16%  Similarity=0.230  Sum_probs=206.8

Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHHccc-cccCCCCchhHHHHHHHHHHHHhhcceeccccchhHHHHHhhhHHHHHHHHH
Q 018894           38 FTFATTLTSWHLLVTFCSLHVALWMKL-FEHKPFDPRAVMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLE  116 (349)
Q Consensus        38 ~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~  116 (349)
                      |.+...+.+.|+....+..-++...|. .+..+.+-+.+...++-+.+.....|.|+++.|-++..+-+++.||-+++++
T Consensus        50 FTfalaLVf~qC~~N~vfAkvl~~ir~~~~~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilG  129 (337)
T KOG1580|consen   50 FTFALALVFFQCTANTVFAKVLFLIRKKTEIDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILG  129 (337)
T ss_pred             ehHHHHHHHHHHHHHHHHHHhheeecccccccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeee
Confidence            667788888888888887766655544 3334445566777788888999999999999999999999999999999999


Q ss_pred             HHHhccccchhhhHHHHHhhhhheeeeeccc-------ccchhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHh
Q 018894          117 TLFFRKKFSRNIQLSLVILLVGVGIATVTDL-------QLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQS  189 (349)
Q Consensus       117 ~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~~-------~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~  189 (349)
                      +++.|++.+++++++++.+++|+++.-+.+.       ..-..|-++.+.+-...+......+|+.+.+.-+...+++++
T Consensus       130 Vl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~  209 (337)
T KOG1580|consen  130 VLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYT  209 (337)
T ss_pred             hhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHH
Confidence            9999999999999999999999998876421       122469999999999999999999999987777888899999


Q ss_pred             hHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHHHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHH
Q 018894          190 CPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYV  269 (349)
Q Consensus       190 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~  269 (349)
                      ++++.+.+.....+ .++......+. .-.+..++-+...++.+.+-+...+..+...||.+.|++.+.+..++++++++
T Consensus       210 NlwStL~Lg~g~lf-TGElweF~yF~-~RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVl  287 (337)
T KOG1580|consen  210 NLWSTLYLGAGLLF-TGELWEFFYFV-QRHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVL  287 (337)
T ss_pred             HHHHHHHhhhhhee-hhhHHHHHHHH-HhccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHH
Confidence            99998877655443 33322211111 23455666666666666666888899999999999999999999999999999


Q ss_pred             hcCCCCchhhhhhHHHHHHHHHHHh
Q 018894          270 LLHDPFSWRNILGILIAVIGMVLYS  294 (349)
Q Consensus       270 ~~~e~~t~~~~~G~~lii~g~~l~~  294 (349)
                      +|+++++.+||+|.++++.|...=.
T Consensus       288 lf~npls~rQwlgtvlVF~aL~~D~  312 (337)
T KOG1580|consen  288 LFNNPLSGRQWLGTVLVFSALTADV  312 (337)
T ss_pred             HhcCcCcHHHHHHHHHHHHHhhhHh
Confidence            9999999999999999999876543

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.81  E-value=3.2e-17  Score=141.16  Aligned_cols=273  Identities=16%  Similarity=0.168  Sum_probs=203.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHH-ccccc---cCCCCchhHH---HHHHHHHHH
Q 018894           13 GALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALW-MKLFE---HKPFDPRAVM---GFGVLNGIS   85 (349)
Q Consensus        13 ~~~~~~~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~-~~~~~---~~~~~~~~~~---~~~~~~~~~   85 (349)
                      .+...|..++. +-+..|.+-.   .+ +..+...|.+-+..++..... .|+.+   .-.++.|.++   ..++..+.+
T Consensus        11 ~~l~Ay~lwG~-lp~y~kll~~---~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~~n   85 (293)
T COG2962          11 LALLAYLLWGL-LPLYFKLLEP---LP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIGLN   85 (293)
T ss_pred             HHHHHHHHHHH-HHHHHHHHcc---CC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence            34444444443 3456676654   23 778888999988876655432 22111   1123333333   335566678


Q ss_pred             HhhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeecccccchhHHHHHHHHHHHHH
Q 018894           86 IGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDLQLNVLGSVLSLLAVLTTC  165 (349)
Q Consensus        86 ~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~~~~a  165 (349)
                      ...+.||..+-.+-.++.=...+|++.++++.+++|||+|+.|+++++++.+|+..-.+...+.++..+.++    ++|+
T Consensus        86 W~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~la----~sf~  161 (293)
T COG2962          86 WWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVALALA----LSFG  161 (293)
T ss_pred             HHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHH----HHHH
Confidence            888999999977777888888889999999999999999999999999999999998887788888776666    8999


Q ss_pred             HHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHHHHHHHHHHHHhhc
Q 018894          166 VAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVIG  245 (349)
Q Consensus       166 ~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (349)
                      +|....|+.    ++|+.+-.......-++..+......+...+    +........+.+++..|.++.+--.....+.+
T Consensus       162 ~Ygl~RK~~----~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~----~~~~~~~~~~~LLv~aG~vTavpL~lf~~aa~  233 (293)
T COG2962         162 LYGLLRKKL----KVDALTGLTLETLLLLPVALIYLLFLADSGQ----FLQQNANSLWLLLVLAGLVTAVPLLLFAAAAK  233 (293)
T ss_pred             HHHHHHHhc----CCchHHhHHHHHHHHhHHHHHHHHHHhcCch----hhhcCCchHHHHHHHhhHHHHHHHHHHHHHHh
Confidence            999776554    4577777776666655555555444442221    22234566778888899888877667777889


Q ss_pred             ccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhcccccc
Q 018894          246 KTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLESQ  302 (349)
Q Consensus       246 ~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~~~~~  302 (349)
                      +.+-.+.++..|++|....+++++++||+++..+....+++-+|.++|.....++.+
T Consensus       234 ~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l~~~r  290 (293)
T COG2962         234 RLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGLYTAR  290 (293)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999999999987655433

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.79  E-value=5.9e-18  Score=149.50  Aligned_cols=214  Identities=18%  Similarity=0.162  Sum_probs=177.2

Q ss_pred             HHHHHhhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeeccc--------ccchhH
Q 018894           82 NGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDL--------QLNVLG  153 (349)
Q Consensus        82 ~~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~~--------~~~~~G  153 (349)
                      ..+.++.++.|+.+++++..+++.+++-+||.+++.++..||+|..+.+++.+.++|++++..++.        .....|
T Consensus       169 WF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~~~llG  248 (416)
T KOG2765|consen  169 WFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPASRPLLG  248 (416)
T ss_pred             HHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCCccchhHH
Confidence            345677889999999999999999999999999999999999999999999999999999998642        223689


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhc--CCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHH
Q 018894          154 SVLSLLAVLTTCVAQIMTNTIQKKF--KVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCL  231 (349)
Q Consensus       154 ~~~~l~s~~~~a~~~v~~k~~~~~~--~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (349)
                      .++++++++.||.|.++.||...++  ++|.-....+..++..+++.|...+.+..  ..+.++.........+++.+.+
T Consensus       249 ~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~--~~e~F~lP~~~q~~~vv~~~li  326 (416)
T KOG2765|consen  249 NLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFF--GEERFELPSSTQFSLVVFNNLI  326 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHh--ccCcccCCCCceeEeeeHhhHH
Confidence            9999999999999999999988766  46777777777777777777666555432  1122333333334445555566


Q ss_pred             HHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhc
Q 018894          232 ISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCC  297 (349)
Q Consensus       232 ~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~  297 (349)
                      ..++..+++.++.-.++|..+++-..++...+++.+.++-+.++++.+++|...|++|..+.++..
T Consensus       327 gtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~  392 (416)
T KOG2765|consen  327 GTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISS  392 (416)
T ss_pred             HHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccc
Confidence            666678999999999999999999999999999999999999999999999999999999988643

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.79  E-value=3.8e-18  Score=148.92  Aligned_cols=210  Identities=19%  Similarity=0.212  Sum_probs=172.6

Q ss_pred             chhHHHHHHHHHHHHhhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeeccc----
Q 018894           72 PRAVMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDL----  147 (349)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~~----  147 (349)
                      ..++...++++.+.+.+.+.+++++++++++++.++..++|++++++++|+|++++||.|+++.+.|+.+...++.    
T Consensus        17 ~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~~~   96 (244)
T PF04142_consen   17 TLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQSSD   96 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccccc
Confidence            3456667899999999999999999999999999999999999999999999999999999999999999865221    


Q ss_pred             -----c--------cchhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhccccccccc
Q 018894          148 -----Q--------LNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVF  214 (349)
Q Consensus       148 -----~--------~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~  214 (349)
                           .        ....|+++.++++++.|+..|+.||.+|+.+.+.+....+...++.++.++.....++.......+
T Consensus        97 ~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~  176 (244)
T PF04142_consen   97 NSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISESGF  176 (244)
T ss_pred             cccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccccCCc
Confidence                 1        125799999999999999999999999988878888888888888888776655444332222333


Q ss_pred             ccccCchhHHHHHHHHHHHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHH
Q 018894          215 AFKYTPYVLFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILI  285 (349)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~l  285 (349)
                      ...++...+..+...++.+    ...-..+|+.+...-+....+..+++.+.++++|+.++|....+|..+
T Consensus       177 f~G~~~~~~~~i~~~a~gG----llva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~  243 (244)
T PF04142_consen  177 FHGYSWWVWIVIFLQAIGG----LLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAAL  243 (244)
T ss_pred             hhhcchHHHHHHHHHHHhh----HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheec
Confidence            3445555555555555555    444456899999999999999999999999999999999999999765

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.78  E-value=9.9e-18  Score=141.66  Aligned_cols=287  Identities=16%  Similarity=0.135  Sum_probs=233.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-hHHHHHHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHhh
Q 018894           10 GTVGALSLSVISSVSIVICNKALISSLGFT-FATTLTSWHLLVTFCSLHVALWMKLFEHKPFDPRAVMGFGVLNGISIGL   88 (349)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~K~v~~~~~~~-~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (349)
                      +-++...-..+.......+..++++..+|. +.|.+++.|+++-..+.+..+..-..+++..+||.+..++.+....+.+
T Consensus        43 QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~~k~r~iP~rtY~~la~~t~gtmGL  122 (367)
T KOG1582|consen   43 QFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQTKRRVIPWRTYVILAFLTVGTMGL  122 (367)
T ss_pred             hHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEeecccceecchhHhhhhHhhhhhcccc
Confidence            333444444555555667889999988887 7999999998886655555544444455677899999999999999999


Q ss_pred             cceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeecc----cccchhHHHHHHHHHHHH
Q 018894           89 LNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTD----LQLNVLGSVLSLLAVLTT  164 (349)
Q Consensus        89 ~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~----~~~~~~G~~~~l~s~~~~  164 (349)
                      .+-++.|++-+...+++++..+-+++.+.++=+.|..++++.+..+..+|.++....|    .++|..|+.+.-.+-++.
T Consensus       123 sn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~mIsgALl~D  202 (367)
T KOG1582|consen  123 SNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVMMISGALLAD  202 (367)
T ss_pred             CcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999887654    467789999999999999


Q ss_pred             HHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHHHHHHHHHHHHhh
Q 018894          165 CVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVI  244 (349)
Q Consensus       165 a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (349)
                      |+-.-..++.++..+.+..++.+|....|.+.++....... +..+...+..+++........+-++.+++-.......+
T Consensus       203 A~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTg-e~f~a~~fcaehp~~tyGy~~~~s~~gylG~~~VLalI  281 (367)
T KOG1582|consen  203 AVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTG-ELFSAWTFCAEHPVRTYGYAFLFSLAGYLGIVFVLALI  281 (367)
T ss_pred             HHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcc-cchhhhHHHHhCcHhHHHHHHHHHHHhHhhHHHHHHHH
Confidence            99888999999988888999999999999988876655433 33333334445555566666666666665566666678


Q ss_pred             cccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhc
Q 018894          245 GKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCC  297 (349)
Q Consensus       245 ~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~  297 (349)
                      +..||..++.+.+.+..+++++++++|..|+|....-|..+++.|+++-.+.+
T Consensus       282 ~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk  334 (367)
T KOG1582|consen  282 KLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK  334 (367)
T ss_pred             HHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence            89999999999999999999999999999999999999999999998865544

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.78  E-value=6.7e-20  Score=154.45  Aligned_cols=265  Identities=13%  Similarity=0.102  Sum_probs=203.7

Q ss_pred             HHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHccccc--cCCCCchhHHHHHHHHHHHHhhcceecccc
Q 018894           19 VISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFE--HKPFDPRAVMGFGVLNGISIGLLNLSLGFN   96 (349)
Q Consensus        19 ~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~al~~~   96 (349)
                      +.++.++.+..|.+-.+     |......|+.+-.+...++...++..  -++..++.++..++....+....++|++|.
T Consensus        47 ~ff~~~~vv~t~~~e~~-----p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R~~LiLRg~mG~tgvmlmyya~~~m  121 (346)
T KOG4510|consen   47 YFFNSCMVVSTKVLEND-----PMELASFRLLVRMLITYPCLIYYMQPVIGPEGKRKWLILRGFMGFTGVMLMYYALMYM  121 (346)
T ss_pred             HHHhhHHHhhhhhhccC-----hhHhhhhhhhhehhhhheEEEEEeeeeecCCCcEEEEEeehhhhhhHHHHHHHHHhhc
Confidence            66677776655555442     77777788555444444443333222  234455666666887778888889999999


Q ss_pred             chhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeec-----cc---------ccchhHHHHHHHHHH
Q 018894           97 SVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVT-----DL---------QLNVLGSVLSLLAVL  162 (349)
Q Consensus        97 ~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~-----~~---------~~~~~G~~~~l~s~~  162 (349)
                      +.+.+.++..++|.+|.++++.++|||.|+.+.++..+.+.|+++++.+     +.         +.+..|.+.++.+.+
T Consensus       122 slaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt~aai~s~l  201 (346)
T KOG4510|consen  122 SLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGTVAAISSVL  201 (346)
T ss_pred             chhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCchHHHHHhHh
Confidence            9999999999999999999999999999999999999999999998742     11         224568888999999


Q ss_pred             HHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHHHHHHHHHHHH
Q 018894          163 TTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFL  242 (349)
Q Consensus       163 ~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (349)
                      ..|.-.++.|++.|  +.|....+.|...++.+..++.......       +.+.+....+++++..|++++..+.....
T Consensus       202 f~asvyIilR~iGk--~~h~~msvsyf~~i~lV~s~I~~~~ig~-------~~lP~cgkdr~l~~~lGvfgfigQIllTm  272 (346)
T KOG4510|consen  202 FGASVYIILRYIGK--NAHAIMSVSYFSLITLVVSLIGCASIGA-------VQLPHCGKDRWLFVNLGVFGFIGQILLTM  272 (346)
T ss_pred             hhhhHHHHHHHhhc--cccEEEEehHHHHHHHHHHHHHHhhccc-------eecCccccceEEEEEehhhhhHHHHHHHH
Confidence            98888889999888  5566666667777777666655443331       22334555667778888889888999999


Q ss_pred             hhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhc
Q 018894          243 VIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCC  297 (349)
Q Consensus       243 ~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~  297 (349)
                      .+++=-|...++..+.+.+++.+..+++|+|-+|++.|.|+++++.+.++....|
T Consensus       273 ~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~k  327 (346)
T KOG4510|consen  273 GLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKK  327 (346)
T ss_pred             HhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHH
Confidence            9999888889999999999999999999999999999999888887776665433

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.78  E-value=6.9e-18  Score=143.08  Aligned_cols=271  Identities=14%  Similarity=0.175  Sum_probs=209.3

Q ss_pred             HHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHhhcceeccc-cchhHHHHHhh
Q 018894           28 CNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFDPRAVMGFGVLNGISIGLLNLSLGF-NSVGFYQMTKL  106 (349)
Q Consensus        28 ~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-~~~s~~~~l~~  106 (349)
                      .-..+.+. +...-..+++.|+++-..-.+++...-...+++.+.|.+......+...+.+.|.++++ +|.+...++++
T Consensus        21 ~lE~L~~~-~pgsgNLITFaqFlFia~eGlif~skf~~~k~kiplk~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRs   99 (330)
T KOG1583|consen   21 FLELLVRN-EPGSGNLITFAQFLFIATEGLIFTSKFFTVKPKIPLKDYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRS   99 (330)
T ss_pred             HHHHHHHh-CCCCeeehHHHHHHHHHHhceeeeccccccCCCCchhhhheehheeeeeeeeccceeeecccceEEEEEec
Confidence            33444443 44556889999998876655555422222336778888988888888888999999987 89999999999


Q ss_pred             hHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeec---cc---------c---cc----hhHHHHHHHHHHHHHHH
Q 018894          107 AIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVT---DL---------Q---LN----VLGSVLSLLAVLTTCVA  167 (349)
Q Consensus       107 ~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~---~~---------~---~~----~~G~~~~l~s~~~~a~~  167 (349)
                      ..++.++++++++.|+|+|.+|+.+++.+.+|+++....   |.         +   .+    ..|+.+...+.+..|..
T Consensus       100 gsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~m  179 (330)
T KOG1583|consen  100 GSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYM  179 (330)
T ss_pred             CcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999988641   11         0   11    26999999999999999


Q ss_pred             HHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHH-Hhhhccc---ccc-cccc-c-ccCchhHHHHHHHHHHHHHHHHHH
Q 018894          168 QIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIG-PFLDGLL---TNK-NVFA-F-KYTPYVLFFIVLSCLISVSVNFST  240 (349)
Q Consensus       168 ~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~-~~~~~~~---~~~-~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~  240 (349)
                      .++.+...++++-++-+.++|......+.++... .+...+.   ..+ ...+ . ..-+..|+.++.+++.-+..--..
T Consensus       180 giyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~CikgV  259 (330)
T KOG1583|consen  180 GIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYFCIKGV  259 (330)
T ss_pred             HHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999999999999999988876665432 1111110   000 0000 0 114566777777777776555555


Q ss_pred             HHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhccc
Q 018894          241 FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSL  299 (349)
Q Consensus       241 ~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~~  299 (349)
                      +....++++.+.+++-++|..++.+++++.|++++|+..|+|..++..|.++|.-...+
T Consensus       260 y~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~~~~  318 (330)
T KOG1583|consen  260 YILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANVWNH  318 (330)
T ss_pred             hhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence            66678899999999999999999999999999999999999999999999999865443

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.77  E-value=1.9e-16  Score=142.78  Aligned_cols=260  Identities=15%  Similarity=0.141  Sum_probs=184.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHccccccCCCCchhHHHH----HHHHHH
Q 018894            9 LGTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFDPRAVMGF----GVLNGI   84 (349)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~   84 (349)
                      .....+++.|+..++.    .|.+.   +.+.++..   |+.++.+++..+....+.+  +.+.+..+..    |++...
T Consensus         4 l~~lia~~~wGs~g~~----~k~~~---g~~~~~~~---~~~~g~l~~~~~~~~~~~~--~~~~~~~~~~g~l~G~~w~i   71 (290)
T TIGR00776         4 LIALIPALFWGSFVLI----NVKIG---GGPYSQTL---GTTFGALILSIAIAIFVLP--EFWALSIFLVGLLSGAFWAL   71 (290)
T ss_pred             HHHHHHHHHHhhhHHH----HhccC---CCHHHHHH---HHHHHHHHHHHHHHHHhCC--cccccHHHHHHHHHHHHHHh
Confidence            3445566667766653    35443   45555443   6777776655443321111  1232444443    344666


Q ss_pred             HHhhcceeccccchhHHHHHhh-hHHHHHHHHHHHHhccccchhh----hHHHHHhhhhheeeeecccc-------cc-h
Q 018894           85 SIGLLNLSLGFNSVGFYQMTKL-AIIPCTILLETLFFRKKFSRNI----QLSLVILLVGVGIATVTDLQ-------LN-V  151 (349)
Q Consensus        85 ~~~~~~~al~~~~~s~~~~l~~-~~pi~~~~l~~~~~~e~~s~~~----~~~i~l~~~Gv~l~~~~~~~-------~~-~  151 (349)
                      ++.+++.+.++++.+.+..+.+ +.|++..+.+.+++||+.++++    +.|+++.++|+.+....+.+       .+ .
T Consensus        72 g~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~  151 (290)
T TIGR00776        72 GQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFK  151 (290)
T ss_pred             hhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchh
Confidence            7789999999999999988888 8889999999999999999999    99999999999998753211       33 6


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHH---HHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHH
Q 018894          152 LGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLL---YQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVL  228 (349)
Q Consensus       152 ~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~---~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (349)
                      .|++++++++++|+.|.+..|+.    +.+|....   .+....++.+..+..  ...     .  +.  .....+..+.
T Consensus       152 ~Gi~~~l~sg~~y~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~-----~--~~--~~~~~~~~~~  216 (290)
T TIGR00776       152 KGILLLLMSTIGYLVYVVVAKAF----GVDGLSVLLPQAIGMVIGGIIFNLGH--ILA-----K--PL--KKYAILLNIL  216 (290)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHc----CCCcceehhHHHHHHHHHHHHHHHHH--hcc-----c--ch--HHHHHHHHHH
Confidence            79999999999999999999975    24777763   333333333332211  000     0  01  1222233344


Q ss_pred             HHHHHHHHHHHHHHhhc-ccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhh----hhHHHHHHHHHHHhh
Q 018894          229 SCLISVSVNFSTFLVIG-KTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNI----LGILIAVIGMVLYSY  295 (349)
Q Consensus       229 ~~~~~~~~~~~~~~~~~-~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~----~G~~lii~g~~l~~~  295 (349)
                      .|++....+..++...+ +.++.+.+++.+.+|+.+.+.++++++|+.+..|+    +|+++++.|+.+...
T Consensus       217 ~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       217 PGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             HHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence            66666566667777788 99999999999999999999999999999999999    999999999988754

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.71  E-value=2.1e-16  Score=129.12  Aligned_cols=143  Identities=31%  Similarity=0.574  Sum_probs=127.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhh-----cCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccc-----cCchh
Q 018894          153 GSVLSLLAVLTTCVAQIMTNTIQKK-----FKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFK-----YTPYV  222 (349)
Q Consensus       153 G~~~~l~s~~~~a~~~v~~k~~~~~-----~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~-----~~~~~  222 (349)
                      |++++++++++.|++.++.|+..++     .+.++.+++.++++.+++++++..+..|++..........     .....
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            7889999999999999999999988     5899999999999999999999998888765332222111     14467


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhh
Q 018894          223 LFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSY  295 (349)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~  295 (349)
                      +..++.++++++.+++..++++++++|++.++++.+|.+..+++++++|+|++|+.+++|+++.++|.++|++
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            8889999999999999999999999999999999999999999999999999999999999999999999974

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>TIGR00803 nst UDP-galactose transporter

Probab=99.36  E-value=3.9e-12  Score=110.43  Aligned_cols=194  Identities=19%  Similarity=0.116  Sum_probs=131.5

Q ss_pred             cchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeec--------------------cc-------c
Q 018894           96 NSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVT--------------------DL-------Q  148 (349)
Q Consensus        96 ~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~--------------------~~-------~  148 (349)
                      ++.+.....++..++++++..+.+.++|++..++++.++...|++....+                    +.       +
T Consensus         2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g   81 (222)
T TIGR00803         2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG   81 (222)
T ss_pred             ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence            46677888888899999999888888888888888888888887743221                    10       2


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHH
Q 018894          149 LNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVL  228 (349)
Q Consensus       149 ~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (349)
                      ....|....+.+.++.++..++.++..|+++...+........++.+.........+........+...++...+..++.
T Consensus        82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (222)
T TIGR00803        82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIVGLL  161 (222)
T ss_pred             cHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHHHHH
Confidence            23567777888888889999999998876543333333333333333222111111111111111112233333333333


Q ss_pred             HHHHHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHH
Q 018894          229 SCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLY  293 (349)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~  293 (349)
                       ...+   +....+.+|+.++...+....++++++.++++++|||+++..++.|+.+++.|+.+|
T Consensus       162 -~a~~---~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       162 -NVGG---GLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             -HHhc---CceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence             3333   455677899999999999999999999999999999999999999999999998765

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.31  E-value=3.6e-11  Score=90.76  Aligned_cols=135  Identities=19%  Similarity=0.195  Sum_probs=113.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHH
Q 018894          153 GSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLI  232 (349)
Q Consensus       153 G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (349)
                      ..++++.+++++++..++.|-..+  ++||............+++.........+...     .+.++..+..++.+|+.
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~--~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~-----~~~~~k~~lflilSGla   76 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLE--GVDPDFATTIRTIVILIFLLIVLLVTGNWQAG-----GEIGPKSWLFLILSGLA   76 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcc--ccCccHHHHHHHHHHHHHHHHHHHhcCceecc-----cccCcceehhhhHHHHH
Confidence            468899999999999999999998  77898888888877777776665544433221     22455567778888888


Q ss_pred             HHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHh
Q 018894          233 SVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYS  294 (349)
Q Consensus       233 ~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~  294 (349)
                      +....+.+|+++|...+.....+.-+.+++++++++++++|++|..+++|++++++|.++.+
T Consensus        77 ~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          77 GGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            88888899999999999999999999999999999999999999999999999999987654

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.16  E-value=2.8e-10  Score=89.16  Aligned_cols=124  Identities=20%  Similarity=0.379  Sum_probs=96.9

Q ss_pred             HHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHH-HHHHHHHH
Q 018894          162 LTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLI-SVSVNFST  240 (349)
Q Consensus       162 ~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  240 (349)
                      ++||.+.+..|+..+  +.|+.....+....+.+ +++.....+...      ....+...+......+++ ....+...
T Consensus         1 ~~~a~~~~~~k~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLK--KISPLSITFWRFLIAGI-LLILLLILGRKP------FKNLSPRQWLWLLFLGLLGTALAYLLY   71 (126)
T ss_pred             ceeeeHHHHHHHHhc--cCCHHHHHHHHHHHHHH-HHHHHHhhcccc------ccCCChhhhhhhhHhhccceehHHHHH
Confidence            468899999999999  47999999999998887 655555444322      111222223333333433 45567788


Q ss_pred             HHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHh
Q 018894          241 FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYS  294 (349)
Q Consensus       241 ~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~  294 (349)
                      ++++++.++...+.+.+++|+++.++++++++|++++.+++|+++++.|+.+.+
T Consensus        72 ~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   72 FYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            889999999999999999999999999999999999999999999999998764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.12  E-value=6.6e-10  Score=84.01  Aligned_cols=128  Identities=16%  Similarity=0.157  Sum_probs=100.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHcc-cccc----CCCCchhHHHHHHHHHHHHhh
Q 018894           14 ALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMK-LFEH----KPFDPRAVMGFGVLNGISIGL   88 (349)
Q Consensus        14 ~~~~~~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~   88 (349)
                      +.++...+.....+..|.-+++.+   |.+.++.|-++..+.+..+.... +...    .++.|..+..-|+..+++..+
T Consensus         7 ~ALLsA~fa~L~~iF~KIGl~~vd---p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~   83 (140)
T COG2510           7 YALLSALFAGLTPIFAKIGLEGVD---PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLL   83 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHhccccC---ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHH
Confidence            334444555556678898888544   88999999998888776665433 2222    233344444457777889999


Q ss_pred             cceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeee
Q 018894           89 LNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATV  144 (349)
Q Consensus        89 ~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~  144 (349)
                      ++.|++...+|...-+..++|+++++++++++|||+|.++|+|++++++|+++.+.
T Consensus        84 Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          84 YFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            99999999999999999999999999999999999999999999999999998763

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=99.12  E-value=1.9e-10  Score=93.46  Aligned_cols=215  Identities=11%  Similarity=0.039  Sum_probs=157.3

Q ss_pred             hHHHHHHHHHHHHhhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeecc--cccch
Q 018894           74 AVMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTD--LQLNV  151 (349)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~--~~~~~  151 (349)
                      +..+.+++....++.+..|++.++++.++.+..++--|+.+++++.+|+|+...++++.++.+.|++++.+-|  ...++
T Consensus        55 ~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a~e~  134 (290)
T KOG4314|consen   55 RTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHADEI  134 (290)
T ss_pred             eecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhhhhh
Confidence            4445567777888899999999999999999999999999999999999999999999999999999998744  56678


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHH----HHHH-hhhcccccccccccccCchhHHHH
Q 018894          152 LGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLF----IIGP-FLDGLLTNKNVFAFKYTPYVLFFI  226 (349)
Q Consensus       152 ~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  226 (349)
                      .|+..++.++...|+|-|..|+.....+.  -....+++..|..-+.    +... .+.+    .+.+. +.....|..+
T Consensus       135 iGi~~AV~SA~~aAlYKV~FK~~iGnAn~--Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~----VE~~q-sFA~~PWG~l  207 (290)
T KOG4314|consen  135 IGIACAVGSAFMAALYKVLFKMFIGNANF--GDAAHFMSCLGFFNLCFISFPALILAFTG----VEHLQ-SFAAAPWGCL  207 (290)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhccCcc--hhHHHHHHHHHHHHHHHHhhhHHHHHHhc----hHHHH-HHhhCCchhh
Confidence            99999999999999999999999874432  2233333333332211    1111 1111    00000 0111123344


Q ss_pred             HHHHHHHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhh
Q 018894          227 VLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSY  295 (349)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~  295 (349)
                      .....+....++..+..+....|...|+=.......-..++.++-+-..+...+.|-.++++|.++.-.
T Consensus       208 ~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiii  276 (290)
T KOG4314|consen  208 CGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIII  276 (290)
T ss_pred             hhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheec
Confidence            444555555677777778888888888777777777778888766668889999999999999988754

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.08  E-value=3.2e-10  Score=88.82  Aligned_cols=115  Identities=17%  Similarity=0.269  Sum_probs=90.8

Q ss_pred             HHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHc-cc---cccCCCCchhHHHHHHH-HHHHHhhcceeccccchh
Q 018894           25 IVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWM-KL---FEHKPFDPRAVMGFGVL-NGISIGLLNLSLGFNSVG   99 (349)
Q Consensus        25 ~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~-~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~~s   99 (349)
                      ...++|...++  .+ |....++|+..+.+ +..+... ++   .+.++.++......+++ ..++..+.+.++++++++
T Consensus         6 ~~~~~k~~~~~--~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~   81 (126)
T PF00892_consen    6 YSVFSKKLLKK--IS-PLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISAS   81 (126)
T ss_pred             HHHHHHHHhcc--CC-HHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcchh
Confidence            45678888884  33 78899999999996 4333222 22   22233444555556666 477889999999999999


Q ss_pred             HHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeee
Q 018894          100 FYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIAT  143 (349)
Q Consensus       100 ~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~  143 (349)
                      .++++.++.|+++.+++++++||+++.+++.|++++++|+.+..
T Consensus        82 ~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   82 IVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999998653

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.05  E-value=6.2e-10  Score=85.83  Aligned_cols=102  Identities=20%  Similarity=0.248  Sum_probs=81.0

Q ss_pred             HHHHHHHHHHHHHHHHcc-cc-----ccCCCCchhHHHHHHHHH-HHHhhcceeccccchhHHHHHhhhHHHHHHHHHHH
Q 018894           46 SWHLLVTFCSLHVALWMK-LF-----EHKPFDPRAVMGFGVLNG-ISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETL  118 (349)
Q Consensus        46 ~~r~~~~~l~l~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~-~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~  118 (349)
                      .+|+..+.+++..+...+ +.     ..+++++..+...+++.. .+..+.++|+++.+ +.+..+.+++|+++++++++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            478888887776654332 11     113344555556677665 78889999999999 58889999999999999999


Q ss_pred             HhccccchhhhHHHHHhhhhheeeeecccc
Q 018894          119 FFRKKFSRNIQLSLVILLVGVGIATVTDLQ  148 (349)
Q Consensus       119 ~~~e~~s~~~~~~i~l~~~Gv~l~~~~~~~  148 (349)
                      ++|||++++++.+++++++|++++.+++.+
T Consensus        81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   81 FFKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             HhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            999999999999999999999999887643

>TIGR00688 rarD rarD protein

Probab=98.95  E-value=1.8e-08  Score=89.50  Aligned_cols=140  Identities=14%  Similarity=0.146  Sum_probs=106.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHH
Q 018894          152 LGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCL  231 (349)
Q Consensus       152 ~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (349)
                      .|..+.++++++|+...+..|. ..  +++|.++.++.+.++++++++.......................+..+...++
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~--~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   78 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LK--PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL   78 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hc--cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH
Confidence            4889999999999999999997 44  58999999999999887776554332211000000000011122344556666


Q ss_pred             HHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHh
Q 018894          232 ISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYS  294 (349)
Q Consensus       232 ~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~  294 (349)
                      +....+...++++++.++..++++.++.|+++.++++++++|+++..+++|+++.++|+.+..
T Consensus        79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence            666677788889999999999999999999999999999999999999999999999988654

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.95  E-value=1.1e-07  Score=83.07  Aligned_cols=202  Identities=18%  Similarity=0.160  Sum_probs=145.8

Q ss_pred             HHHHHHHHHHhhcceeccccchhHHHHHh-hhHHHHHHHHHHHHhccccchhhhH----HHHHhhhhheeeeeccccc--
Q 018894           77 GFGVLNGISIGLLNLSLGFNSVGFYQMTK-LAIIPCTILLETLFFRKKFSRNIQL----SLVILLVGVGIATVTDLQL--  149 (349)
Q Consensus        77 ~~~~~~~~~~~~~~~al~~~~~s~~~~l~-~~~pi~~~~l~~~~~~e~~s~~~~~----~i~l~~~Gv~l~~~~~~~~--  149 (349)
                      ..|++..++....+.++++.++|.+--+. ...-+.+.+.++++++|.-+..++.    +++++++|+.+.+..|.+.  
T Consensus        50 lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~~  129 (269)
T PF06800_consen   50 LSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSDK  129 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccccc
Confidence            34677788889999999999888866555 5667778999999999998877754    8889999999988754221  


Q ss_pred             ------chhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhH
Q 018894          150 ------NVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVL  223 (349)
Q Consensus       150 ------~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (349)
                            ...|+...+++.+.|..|.+..|..    +.|++...+=++ .+.++......... .    ......    ..
T Consensus       130 ~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~----~~~~~~~~lPqa-iGm~i~a~i~~~~~-~----~~~~~k----~~  195 (269)
T PF06800_consen  130 SSSKSNMKKGILALLISTIGYWIYSVIPKAF----HVSGWSAFLPQA-IGMLIGAFIFNLFS-K----KPFFEK----KS  195 (269)
T ss_pred             cccccchhhHHHHHHHHHHHHHHHHHHHHhc----CCChhHhHHHHH-HHHHHHHHHHhhcc-c----cccccc----ch
Confidence                  2469999999999999999997763    457777666443 23333222221111 0    011111    12


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhh----hhHHHHHHHHHH
Q 018894          224 FFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNI----LGILIAVIGMVL  292 (349)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~----~G~~lii~g~~l  292 (349)
                      +.-+.+|++-...+..++...++.+....=.+..+..+++.+.+.++++|+-+.+++    +|++++++|.++
T Consensus       196 ~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  196 WKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             HHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence            344556666666677777788899999888999999999999999999998886644    588888888754

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.90  E-value=4.7e-08  Score=88.65  Aligned_cols=141  Identities=13%  Similarity=0.183  Sum_probs=108.0

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHH
Q 018894          148 QLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIV  227 (349)
Q Consensus       148 ~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (349)
                      +....|.++.++++++|+...+..|.. .  +.+|.++.++...++.+++++...........   .....+...+....
T Consensus         4 ~~~~~g~~~~l~a~~~wg~~~~~~k~~-~--~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~   77 (296)
T PRK15430          4 KQTRQGVLLALAAYFIWGIAPAYFKLI-Y--YVPADEILTHRVIWSFFFMVVLMSICRQWSYL---KTLIQTPQKIFMLA   77 (296)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHh-c--CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHH---HHHHcCHHHHHHHH
Confidence            334579999999999999999999764 4  58999999999999887776554322111000   00001222333344


Q ss_pred             HHHHHHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHh
Q 018894          228 LSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYS  294 (349)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~  294 (349)
                      ..++....++...++++++.++...++..++.|+++.++++++++|+++..+++|+++.++|+.+..
T Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         78 VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            5555555667888899999999999999999999999999999999999999999999999998764

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.76  E-value=3.1e-07  Score=82.71  Aligned_cols=133  Identities=14%  Similarity=0.164  Sum_probs=97.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHHH
Q 018894          154 SVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLIS  233 (349)
Q Consensus       154 ~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (349)
                      +.+.+.+++++|.+.+.+||..+++  ++.  ..+....+++.+++..........    +. ......+...+..++..
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~--~~~--~~~~~~~~~~~l~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~   73 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKE--PDF--LWWALLAHSVLLTPYGLWYLAQVG----WS-RLPATFWLLLAISAVAN   73 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCch--hHH--HHHHHHHHHHHHHHHHHHhcccCC----CC-CcchhhHHHHHHHHHHH
Confidence            5678999999999999999887742  343  344445555555554432110000    00 01122344556666666


Q ss_pred             HHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhh
Q 018894          234 VSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSY  295 (349)
Q Consensus       234 ~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~  295 (349)
                      ..+....+.+.++.++...+.+.+..|+++.++++++++|+++..+++|+++++.|+.+...
T Consensus        74 ~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~  135 (281)
T TIGR03340        74 MVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL  135 (281)
T ss_pred             HHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence            67777888899999999999999999999999999999999999999999999999987654

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.69  E-value=4.9e-07  Score=80.33  Aligned_cols=130  Identities=18%  Similarity=0.105  Sum_probs=93.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHccccccCCCCch---hHHHHHHH-HHH
Q 018894            9 LGTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFDPR---AVMGFGVL-NGI   84 (349)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~   84 (349)
                      .......++-.++.....+..|...++.+ +.+.....+++.++.+++.+.......+.. .+.+   ..+..+++ ..+
T Consensus       127 ~~G~~~~l~a~~~~a~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  204 (260)
T TIGR00950       127 PAGLLLGLGSGISFALGTVLYKRLVKKEG-PELLQFTGWVLLLGALLLLPFAWFLGPNPQ-ALSLQWGALLYLGLIGTAL  204 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHhhcCC-chHHHHHHHHHHHHHHHHHHHHHhcCCCCC-cchHHHHHHHHHHHHHHHH
Confidence            33444444555555556677888876433 223455557888888877766544322221 1222   23444554 356


Q ss_pred             HHhhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhhe
Q 018894           85 SIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVG  140 (349)
Q Consensus        85 ~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~  140 (349)
                      ...++++++++.+++.++.+.++.|++++++++++++|+++..++.|..+++.|+.
T Consensus       205 ~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~  260 (260)
T TIGR00950       205 AYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence            77889999999999999999999999999999999999999999999999999873

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.69  E-value=6e-07  Score=83.18  Aligned_cols=138  Identities=12%  Similarity=0.128  Sum_probs=109.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHH
Q 018894          152 LGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCL  231 (349)
Q Consensus       152 ~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (349)
                      .-+..++...++|+.+.++.|...+ .+++|....++.+.++++++++.....+.....    + ..++..+..+...++
T Consensus        13 ~~~~~~~~~q~~~~~~~~~~k~a~~-~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~----~-~~~~~~~~~l~l~g~   86 (358)
T PLN00411         13 VFLTAMLATETSVVGISTLFKVATS-KGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSL----P-PLSVSILSKIGLLGF   86 (358)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHH-CCCCccHHHHHHHHHHHHHHHHHHHHHHHhccc----C-cchHHHHHHHHHHHH
Confidence            4567788889999999999999996 478999999999999988888776544321110    0 112223344455555


Q ss_pred             HHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHh------cCCCCchhhhhhHHHHHHHHHHHhh
Q 018894          232 ISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVL------LHDPFSWRNILGILIAVIGMVLYSY  295 (349)
Q Consensus       232 ~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~------~~e~~t~~~~~G~~lii~g~~l~~~  295 (349)
                      +++.++...+..++++++..++++.++.|+++.++++++      ++|+++..+++|+++.++|+.+...
T Consensus        87 ~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~  156 (358)
T PLN00411         87 LGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIF  156 (358)
T ss_pred             HHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHH
Confidence            555566678889999999999999999999999999999      6999999999999999999987654

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.60  E-value=1.3e-06  Score=78.91  Aligned_cols=210  Identities=13%  Similarity=0.168  Sum_probs=118.1

Q ss_pred             HHHHHHHhhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeecc---cc-cc-----
Q 018894           80 VLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTD---LQ-LN-----  150 (349)
Q Consensus        80 ~~~~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~---~~-~~-----  150 (349)
                      +.+.++..+.+.|+.+.|.+..+-+.....++.++++..++|||++++++.|..+++.|..+++...   .+ .+     
T Consensus        58 ~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~~~l~  137 (300)
T PF05653_consen   58 LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHTLDELI  137 (300)
T ss_pred             HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCCHHHHH
Confidence            4456778888999999999999999999999999999999999999999999999999999765411   11 10     


Q ss_pred             -------hhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHH---HHHhhhcccccccccccccCc
Q 018894          151 -------VLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFI---IGPFLDGLLTNKNVFAFKYTP  220 (349)
Q Consensus       151 -------~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~---~~~~~~~~~~~~~~~~~~~~~  220 (349)
                             +..+...... +...+.....+|..++   +..........+++...+.   ............+.  . ..+
T Consensus       138 ~~~~~~~fl~y~~~~~~-~~~~L~~~~~~r~g~~---~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~~~--f-~~~  210 (300)
T PF05653_consen  138 ALLSQPGFLVYFILVLV-LILILIFFIKPRYGRR---NILVYISICSLIGSFTVLSAKAISILIKLTFSGDNQ--F-TYP  210 (300)
T ss_pred             HHhcCcceehhHHHHHH-HHHHHHHhhcchhccc---ceEEEEEEeccccchhhhHHHHHHHHHHHHhcCchh--h-hhh
Confidence                   1111111111 1112222222222221   1111111111112111110   00001100000111  1 223


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhcccCcchhhhhhhh-hHHHHHHHHHHhcCC--CCchh----hhhhHHHHHHHHHHH
Q 018894          221 YVLFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHL-KTCLVLAFGYVLLHD--PFSWR----NILGILIAVIGMVLY  293 (349)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~-~~v~~~~~~~~~~~e--~~t~~----~~~G~~lii~g~~l~  293 (349)
                      ..+.+++.........-...+.++++.++.....+.+. -...+++-|.++|+|  ..+..    ...|..+++.|+.+.
T Consensus       211 ~~y~l~~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~lL  290 (300)
T PF05653_consen  211 LTYLLLLVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFLL  290 (300)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhhee
Confidence            33333333333333344467788998887766555543 456778888888887  45553    345788888888877


Q ss_pred             hhh
Q 018894          294 SYC  296 (349)
Q Consensus       294 ~~~  296 (349)
                      +..
T Consensus       291 ~~~  293 (300)
T PF05653_consen  291 SSS  293 (300)
T ss_pred             ecc
Confidence            643

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.36  E-value=1.2e-05  Score=72.96  Aligned_cols=130  Identities=14%  Similarity=0.197  Sum_probs=94.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHH
Q 018894          152 LGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCL  231 (349)
Q Consensus       152 ~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (349)
                      .+++.+++++++|+...+..|...+  +++|.....+....+.+++++..   ..+ .    .. +..+   ..++..++
T Consensus         4 ~~~l~~l~a~~~Wg~~~~~~k~~~~--~~~P~~~~~~R~~~a~l~l~~~~---~~~-~----~~-~~~~---~~~~~~~l   69 (295)
T PRK11689          4 KATLIGLIAILLWSTMVGLIRGVSE--SLGPVGGAAMIYSVSGLLLLLTV---GFP-R----LR-QFPK---RYLLAGGL   69 (295)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHc--cCChHHHHHHHHHHHHHHHHHHc---ccc-c----cc-cccH---HHHHHHhH
Confidence            4677899999999999999999888  67999999999888877766432   110 0    00 1111   12223333


Q ss_pred             HHHHHHHHHHHhh----cccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhh
Q 018894          232 ISVSVNFSTFLVI----GKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSY  295 (349)
Q Consensus       232 ~~~~~~~~~~~~~----~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~  295 (349)
                      ....+....+...    +..++...+++.++.|+++.++++++++|+++..+++|+++.++|+.+...
T Consensus        70 ~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~  137 (295)
T PRK11689         70 LFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLG  137 (295)
T ss_pred             HHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheec
Confidence            3333343333333    456778889999999999999999999999999999999999999987753

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.33  E-value=2e-05  Score=71.39  Aligned_cols=130  Identities=12%  Similarity=-0.051  Sum_probs=96.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHHH
Q 018894          154 SVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLIS  233 (349)
Q Consensus       154 ~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (349)
                      ++..++-.+.|+...+..|...+  +.+|.....+....+++++++........ .        .+...+......|.+.
T Consensus        10 ~~~~~~~~~iWg~~~~~~K~~~~--~~~p~~~~~~R~~~a~l~ll~~~~~~~~~-~--------~~~~~~~~~~~~g~~~   78 (292)
T PRK11272         10 FGALFALYIIWGSTYLVIRIGVE--SWPPLMMAGVRFLIAGILLLAFLLLRGHP-L--------PTLRQWLNAALIGLLL   78 (292)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHHHHhCCC-C--------CcHHHHHHHHHHHHHH
Confidence            34467778999999999998877  78999999999999988877664322111 0        0112233333344333


Q ss_pred             -HHHHHHHHHhh-cccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhh
Q 018894          234 -VSVNFSTFLVI-GKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSY  295 (349)
Q Consensus       234 -~~~~~~~~~~~-~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~  295 (349)
                       ..++...+.+. ++.++...+++.++.|+++.+++.+ ++|+++..+++|+++.++|+.+...
T Consensus        79 ~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~  141 (292)
T PRK11272         79 LAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNS  141 (292)
T ss_pred             HHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhc
Confidence             23344555666 8888888999999999999999985 7999999999999999999988754

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.33  E-value=2e-05  Score=61.78  Aligned_cols=120  Identities=15%  Similarity=0.169  Sum_probs=80.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHH
Q 018894          152 LGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCL  231 (349)
Q Consensus       152 ~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (349)
                      .|+++.+.+.++.+...++.|+-+++.+.  .+.... . .   ..+ . ...+             +....+..+....
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~--~~~~~~-~-~---~~~-~-~~~~-------------p~~~i~lgl~~~~   59 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPL--LSHAWD-F-I---AAL-L-AFGL-------------ALRAVLLGLAGYA   59 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCC--ccchhH-H-H---HHH-H-HHhc-------------cHHHHHHHHHHHH
Confidence            47889999999999999999998875432  111110 0 0   000 0 0000             0001122222223


Q ss_pred             HHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHH--hcCCCCchhhhhhHHHHHHHHHHHhhh
Q 018894          232 ISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYV--LLHDPFSWRNILGILIAVIGMVLYSYC  296 (349)
Q Consensus       232 ~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~--~~~e~~t~~~~~G~~lii~g~~l~~~~  296 (349)
                      +   ..+.+..++++.+...+..+....++...+.++.  +|||++|+.+++|++++++|+++.++.
T Consensus        60 l---a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~  123 (129)
T PRK02971         60 L---SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP  123 (129)
T ss_pred             H---HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence            3   3567778899999999888888888777777774  899999999999999999999998753

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.33  E-value=4.9e-06  Score=63.57  Aligned_cols=64  Identities=16%  Similarity=0.089  Sum_probs=59.1

Q ss_pred             HHHHHHHhhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeee
Q 018894           80 VLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIAT  143 (349)
Q Consensus        80 ~~~~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~  143 (349)
                      +++++..++...++++.|.+.+..+.++.++++++.+++++|||++.++++|+.++++|++++.
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            4466788888999999999999999999999999999999999999999999999999998764

>PRK13499 rhamnose-proton symporter; Provisional

Probab=98.29  E-value=0.00047  Score=63.04  Aligned_cols=220  Identities=14%  Similarity=0.076  Sum_probs=134.1

Q ss_pred             HHHHHHHHHHHHhhcceeccccchhHHH-HHhhhHHHHHHHHHHHHhcccc---ch----hhhHHHHHhhhhheeeee--
Q 018894           75 VMGFGVLNGISIGLLNLSLGFNSVGFYQ-MTKLAIIPCTILLETLFFRKKF---SR----NIQLSLVILLVGVGIATV--  144 (349)
Q Consensus        75 ~~~~~~~~~~~~~~~~~al~~~~~s~~~-~l~~~~pi~~~~l~~~~~~e~~---s~----~~~~~i~l~~~Gv~l~~~--  144 (349)
                      -+..|++..+++.....++++..+|... +-..+.-+...++..++++|-.   +.    .-..|++++++|+++.+.  
T Consensus        76 ~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag  155 (345)
T PRK13499         76 VFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAG  155 (345)
T ss_pred             HHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence            3344677788888999999999998865 4456778888888888888643   32    357888899999998876  


Q ss_pred             --ccc--------ccc-hhHHHHHHHHHHHHHHHH-------HHHHHHHhhcCCCHHHHHHHhhH---HHHHHHHHHHHh
Q 018894          145 --TDL--------QLN-VLGSVLSLLAVLTTCVAQ-------IMTNTIQKKFKVSSTQLLYQSCP---YQALTLFIIGPF  203 (349)
Q Consensus       145 --~~~--------~~~-~~G~~~~l~s~~~~a~~~-------v~~k~~~~~~~~~~~~~~~~~~~---~~~i~l~~~~~~  203 (349)
                        .|.        +.+ ..|+++++++.+.++.|.       ...+... +.+.++.....-...   .+..+.-.....
T Consensus       156 ~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~-~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~  234 (345)
T PRK13499        156 QLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAA-ALGVDPLYAALPSYVVIMGGGAITNLGFCF  234 (345)
T ss_pred             hhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhh-hcCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence              332        122 479999999999999999       4333321 134555544443332   222222111111


Q ss_pred             hh-cccccccccc-cccC----chhHHHHHHHHHHHHHHHHHHHHhhcccCcchhhh----hhhhhHHHHHHHHHHhcCC
Q 018894          204 LD-GLLTNKNVFA-FKYT----PYVLFFIVLSCLISVSVNFSTFLVIGKTSPVTYQV----LGHLKTCLVLAFGYVLLHD  273 (349)
Q Consensus       204 ~~-~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~----~~~~~~v~~~~~~~~~~~e  273 (349)
                      .. .-....+... ....    .....+.+..|++=+..+..+....++.+.....+    ...+..+++.+.+. +++|
T Consensus       235 ~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE  313 (345)
T PRK13499        235 IRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKE  313 (345)
T ss_pred             HHHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhh
Confidence            10 0001100011 1111    22333445555555555555655566664443333    33666688888898 4999


Q ss_pred             CCc------hhhhhhHHHHHHHHHHHhhh
Q 018894          274 PFS------WRNILGILIAVIGMVLYSYC  296 (349)
Q Consensus       274 ~~t------~~~~~G~~lii~g~~l~~~~  296 (349)
                      .-+      ...++|++++++|..+....
T Consensus       314 ~K~a~~k~~~~l~~G~vliI~g~~lig~~  342 (345)
T PRK13499        314 WKGASRRPVRVLSLGCVVIILAANIVGLG  342 (345)
T ss_pred             ccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence            766      66688999999999887654

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.25  E-value=3.7e-05  Score=69.89  Aligned_cols=125  Identities=13%  Similarity=0.096  Sum_probs=91.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHHH
Q 018894          154 SVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLIS  233 (349)
Q Consensus       154 ~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (349)
                      .++.++++++|+...+..|...+  +++|....++...++++.+++..   ...         ....   ......++..
T Consensus         6 ~l~~l~~~~~Wg~~~~~~k~~~~--~~~p~~~~~~R~~~a~~~l~~~~---~~~---------~~~~---~~~~~~g~~~   68 (299)
T PRK11453          6 GVLALLVVVVWGLNFVVIKVGLH--NMPPLMLAGLRFMLVAFPAIFFV---ARP---------KVPL---NLLLGYGLTI   68 (299)
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHh--cCCHHHHHHHHHHHHHHHHHHHh---cCC---------CCch---HHHHHHHHHH
Confidence            35688899999999999998887  68999999999887765544322   100         0011   1122223322


Q ss_pred             H-HHHHHHHHhhcc-cCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhh
Q 018894          234 V-SVNFSTFLVIGK-TSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSY  295 (349)
Q Consensus       234 ~-~~~~~~~~~~~~-~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~  295 (349)
                      . .+....+...++ .++...+++.++.|+++.++++++++|+++..+++|+++.++|+.+...
T Consensus        69 ~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~  132 (299)
T PRK11453         69 SFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIE  132 (299)
T ss_pred             HHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhcc
Confidence            2 223344455665 5777888899999999999999999999999999999999999987753

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.20  E-value=2.1e-05  Score=71.19  Aligned_cols=127  Identities=7%  Similarity=-0.049  Sum_probs=86.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHccccccCCCCchh---HHHHHHHH-HHHHhh
Q 018894           13 GALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFDPRA---VMGFGVLN-GISIGL   88 (349)
Q Consensus        13 ~~~~~~~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~   88 (349)
                      ...+.-.++.....++.|...+++  + |.... +...++.+++.+....... ....++..   .+..+++. .+.+.+
T Consensus       151 ll~l~aa~~~a~~~v~~r~~~~~~--~-~~~~~-~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~l~lgv~~t~~~~~l  225 (293)
T PRK10532        151 ALALGAGACWAIYILSGQRAGAEH--G-PATVA-IGSLIAALIFVPIGALQAG-EALWHWSILPLGLAVAILSTALPYSL  225 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccC--C-chHHH-HHHHHHHHHHHHHHHHccC-cccCCHHHHHHHHHHHHHHHHHHHHH
Confidence            333444444445566777776532  2 44554 4445555555444332211 11122222   23455543 467778


Q ss_pred             cceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeee
Q 018894           89 LNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATV  144 (349)
Q Consensus        89 ~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~  144 (349)
                      +++++++.+++.++++.++.|++..++++++++|+++..+++|..++++|++....
T Consensus       226 ~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~  281 (293)
T PRK10532        226 EMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTL  281 (293)
T ss_pred             HHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence            89999999999999999999999999999999999999999999999999987754

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.19  E-value=7e-05  Score=69.53  Aligned_cols=135  Identities=13%  Similarity=0.061  Sum_probs=95.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCC-HHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHH
Q 018894          154 SVLSLLAVLTTCVAQIMTNTIQKKFKVS-STQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLI  232 (349)
Q Consensus       154 ~~~~l~s~~~~a~~~v~~k~~~~~~~~~-~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (349)
                      ..+.++--.+...+++..|...++  .+ |+.+..+...++.+...+....  +....+.   .+.....+..++..+++
T Consensus        51 ~~~~~~wy~~s~~~~~~nK~vl~~--~~~P~~l~~~~~~~~~l~~~~~~~~--~~~~~~~---~~~~~~~~~~llp~gl~  123 (350)
T PTZ00343         51 ALLFLTWYALNVLYVVDNKLALNM--LPLPWTISSLQLFVGWLFALLYWAT--GFRKIPR---IKSLKLFLKNFLPQGLC  123 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHh--CChhHHHHHHHHHHHHHHHHHHHHh--CCCCCCC---CCCHHHHHHHHHHHHHH
Confidence            334444444445678888888884  56 9999999998887765544321  1111000   11111233445555555


Q ss_pred             HHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhh
Q 018894          233 SVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSY  295 (349)
Q Consensus       233 ~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~  295 (349)
                      ....+...+.++++.++..+.++..+.|++++++++++++|+++..++.|+++++.|+.+...
T Consensus       124 ~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~  186 (350)
T PTZ00343        124 HLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASV  186 (350)
T ss_pred             HHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheec
Confidence            554455566889999999999999999999999999999999999999999999999998654

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.14  E-value=9.2e-05  Score=67.35  Aligned_cols=124  Identities=14%  Similarity=0.138  Sum_probs=89.8

Q ss_pred             HHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHHHHHHHHHHHH
Q 018894          163 TTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFL  242 (349)
Q Consensus       163 ~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (349)
                      +...++++.|...++. ..|..+.......+.+...+...  .+....     ...+...+..++..+++...+....+.
T Consensus        13 ~~~~~~~~NK~~l~~~-~~P~~~~~~~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~   84 (302)
T TIGR00817        13 LNVYFNIYNKKLLNVF-PYPYFKTLISLAVGSLYCLLSWS--SGLPKR-----LKISSALLKLLLPVAIVHTIGHVTSNV   84 (302)
T ss_pred             HHHHHHHHHHHHHhhC-ChhHHHHHHHHHHHHHHHHHHHH--hCCCCC-----CCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3344566778888743 46888888877776655543311  111111     112233444555566666666778889


Q ss_pred             hhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHh
Q 018894          243 VIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYS  294 (349)
Q Consensus       243 ~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~  294 (349)
                      .+++.++...+++..+.|+++.++++++++|+++..++.|++++++|+.+..
T Consensus        85 ~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~  136 (302)
T TIGR00817        85 SLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS  136 (302)
T ss_pred             HHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc
Confidence            9999999999999999999999999999999999999999999999997653

specificities overlap.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.14  E-value=6.3e-05  Score=65.79  Aligned_cols=141  Identities=13%  Similarity=0.165  Sum_probs=110.9

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHH
Q 018894          150 NVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLS  229 (349)
Q Consensus       150 ~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (349)
                      +..|+++++.+-+.|+.--.+.|-+.   +.++.++..+..+.+.++++........+...   .....++..+.....+
T Consensus         5 ~~~Gil~~l~Ay~lwG~lp~y~kll~---~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~---~~~~~~p~~~~~~~l~   78 (293)
T COG2962           5 SRKGILLALLAYLLWGLLPLYFKLLE---PLPATEILAHRVIWSFPFMLALLFLLRQWREL---KQLLKQPKTLLMLALT   78 (293)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHH---HHHHhCcHHHHHHHHH
Confidence            45799999999999999888887765   46899999999999888877666554433221   1223455566666666


Q ss_pred             HHHHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhh
Q 018894          230 CLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYC  296 (349)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~  296 (349)
                      ++.-..-.....|+........+|.=.++.|.+.++.|.++++|+++..|++..++..+|+..-.+.
T Consensus        79 a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~  145 (293)
T COG2962          79 ALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWL  145 (293)
T ss_pred             HHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence            6665555556668899999999999999999999999999999999999999999999999875543

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.14  E-value=4.8e-05  Score=61.73  Aligned_cols=126  Identities=18%  Similarity=0.096  Sum_probs=88.6

Q ss_pred             HHHHHHHHHHHHHHHHhhc----CCChHHHHHHHHHHHHHHHHHHHHHc-cccc-------cCC--C--C---chhHHHH
Q 018894           18 SVISSVSIVICNKALISSL----GFTFATTLTSWHLLVTFCSLHVALWM-KLFE-------HKP--F--D---PRAVMGF   78 (349)
Q Consensus        18 ~~~~~~~~~~~~K~v~~~~----~~~~p~~~~~~r~~~~~l~l~~~~~~-~~~~-------~~~--~--~---~~~~~~~   78 (349)
                      ..++...-.++.|..+++.    .-..|..+..+.-..+.+++.+.... +..+       ..+  .  +   +...+..
T Consensus         8 s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (153)
T PF03151_consen    8 SSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILS   87 (153)
T ss_pred             HHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHH
Confidence            3344444556777777762    22336666667777777666655332 1111       011  0  1   1122233


Q ss_pred             HHHHHHHHhhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeee
Q 018894           79 GVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIAT  143 (349)
Q Consensus        79 ~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~  143 (349)
                      +++..+.+...+..++++++-+.+++.....+++.++++++++|+++..++.|+++.++|+.+..
T Consensus        88 ~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys  152 (153)
T PF03151_consen   88 GLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS  152 (153)
T ss_pred             HHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence            55666788899999999999999999999999999999999999999999999999999998754

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.04  E-value=5.7e-05  Score=58.03  Aligned_cols=71  Identities=17%  Similarity=0.344  Sum_probs=59.2

Q ss_pred             HHHHHHHHH-HHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhc
Q 018894          226 IVLSCLISV-SVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCC  297 (349)
Q Consensus       226 ~~~~~~~~~-~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~  297 (349)
                      .+..+++.. ..+...+++.++.++ ..+....+.|+++.+++.++++|+++..++.|.+++.+|+.+....+
T Consensus        37 ~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~  108 (113)
T PF13536_consen   37 LILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSD  108 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence            344444443 556777788899885 77799999999999999999999999999999999999999987653

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.95  E-value=0.00028  Score=53.89  Aligned_cols=58  Identities=21%  Similarity=0.187  Sum_probs=51.7

Q ss_pred             HHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHh
Q 018894          237 NFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYS  294 (349)
Q Consensus       237 ~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~  294 (349)
                      .+....++++.+...+...-.+.++.+.+.++++|||++|+.+++|+++++.|+.+..
T Consensus        51 ~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         51 MVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            4455667889998888888889999999999999999999999999999999998764

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.95  E-value=0.00012  Score=66.06  Aligned_cols=131  Identities=15%  Similarity=0.099  Sum_probs=94.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHH
Q 018894          153 GSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLI  232 (349)
Q Consensus       153 G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (349)
                      |++++++++++|+...+..|+..   +.++.+...  ..++.++..........+.        ...+..+...+.+|+.
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~---g~~~~~~~~--~~~g~l~~~~~~~~~~~~~--------~~~~~~~~~g~l~G~~   68 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG---GGPYSQTLG--TTFGALILSIAIAIFVLPE--------FWALSIFLVGLLSGAF   68 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC---CCHHHHHHH--HHHHHHHHHHHHHHHhCCc--------ccccHHHHHHHHHHHH
Confidence            67899999999999999998865   445555542  3334443333322222110        1124445556666666


Q ss_pred             HHHHHHHHHHhhcccCcchhhhhhh-hhHHHHHHHHHHhcCCCCchhh----hhhHHHHHHHHHHHhhh
Q 018894          233 SVSVNFSTFLVIGKTSPVTYQVLGH-LKTCLVLAFGYVLLHDPFSWRN----ILGILIAVIGMVLYSYC  296 (349)
Q Consensus       233 ~~~~~~~~~~~~~~~~a~~~s~~~~-~~~v~~~~~~~~~~~e~~t~~~----~~G~~lii~g~~l~~~~  296 (349)
                      =...++.++.++++.+....-.+.+ +.+++..+.+.++++|+.+..+    ++|.+++++|+.+....
T Consensus        69 w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~  137 (290)
T TIGR00776        69 WALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRS  137 (290)
T ss_pred             HHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEec
Confidence            5566788888999988888877767 8888999999999999999999    99999999998887543

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.89  E-value=0.00053  Score=54.51  Aligned_cols=132  Identities=20%  Similarity=0.210  Sum_probs=99.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHH
Q 018894          153 GSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLI  232 (349)
Q Consensus       153 G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (349)
                      ..++++.+.++-+.+..+.-++.++.+ +|+...+..+..+.+.+.....+.+.. ..      +.....-++...+|++
T Consensus         2 ~~lla~~aG~~i~~q~~~N~~L~~~~g-s~~~as~i~~~~G~i~~~i~~~~~~~~-~~------~~~~~~p~w~~lGG~l   73 (138)
T PF04657_consen    2 YILLALLAGALIALQAAFNGQLGKALG-SPLVASFISFGVGFILLLIILLITGRP-SL------ASLSSVPWWAYLGGLL   73 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHHHHhccc-cc------chhccCChHHhccHHH
Confidence            357888999999999999999988654 699999999999998888777666543 11      1111122445558888


Q ss_pred             HHHHHHHHHHhhcccCcchhhhhhhhh-HHHHHHHHHH----hcCCCCchhhhhhHHHHHHHHHH
Q 018894          233 SVSVNFSTFLVIGKTSPVTYQVLGHLK-TCLVLAFGYV----LLHDPFSWRNILGILIAVIGMVL  292 (349)
Q Consensus       233 ~~~~~~~~~~~~~~~~a~~~s~~~~~~-~v~~~~~~~~----~~~e~~t~~~~~G~~lii~g~~l  292 (349)
                      +..+-......+++.++.....+...- -+.+.+++.+    .-++++++.+++|.+++++|+.+
T Consensus        74 G~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   74 GVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            888888888889999999888777664 4467777775    23568999999999999999863

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.89  E-value=0.00035  Score=63.62  Aligned_cols=128  Identities=19%  Similarity=0.195  Sum_probs=91.9

Q ss_pred             HHHHHHHHHHHHhhcCCC--HHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHHHHHHHHHHH
Q 018894          164 TCVAQIMTNTIQKKFKVS--STQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTF  241 (349)
Q Consensus       164 ~a~~~v~~k~~~~~~~~~--~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (349)
                      +..+.+..+++.++....  |..+.+.+....++...+.........         .....+.-....+++.+......+
T Consensus        12 ~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~   82 (303)
T PF08449_consen   12 CCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPK---------SRKIPLKKYAILSFLFFLASVLSN   82 (303)
T ss_pred             HHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccC---------CCcChHHHHHHHHHHHHHHHHHHH
Confidence            345678888888865545  777777777666655554433222010         011112222333444555567788


Q ss_pred             HhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhcccc
Q 018894          242 LVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLE  300 (349)
Q Consensus       242 ~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~~~  300 (349)
                      .++++.+..+..+....+++.+++++.++++++.+..++.+.+++.+|+.+....+.+.
T Consensus        83 ~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~  141 (303)
T PF08449_consen   83 AALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSS  141 (303)
T ss_pred             HHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccc
Confidence            88999999999999999999999999999999999999999999999999998765443

; GO: 0055085 transmembrane transport

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.85  E-value=0.00036  Score=54.72  Aligned_cols=70  Identities=14%  Similarity=0.072  Sum_probs=61.7

Q ss_pred             HHHHHHHHHHHhhcceeccccchhHHHHHhhhHHHHHHHHHHH--HhccccchhhhHHHHHhhhhheeeeec
Q 018894           76 MGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETL--FFRKKFSRNIQLSLVILLVGVGIATVT  145 (349)
Q Consensus        76 ~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~--~~~e~~s~~~~~~i~l~~~Gv~l~~~~  145 (349)
                      ...-+++++..++++.++++.+++.+..+.+..+.++.+.++.  ++||++|..+++|+.++++|+.++..+
T Consensus        52 ~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~  123 (129)
T PRK02971         52 LLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP  123 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence            3344567888999999999999999999999999888888885  899999999999999999999987653

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=97.70  E-value=0.0018  Score=58.01  Aligned_cols=141  Identities=21%  Similarity=0.127  Sum_probs=97.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHH
Q 018894          151 VLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSC  230 (349)
Q Consensus       151 ~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (349)
                      ..+....++.++.++......|...++ ..+...........+.+...+... .+ ....   .. .... .....+..+
T Consensus         6 ~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~---~~-~~~~-~~~~~~~~~   77 (292)
T COG0697           6 LLGLLALLLWGLLWGLSFIALKLAVES-LDPFLFAAALRFLIAALLLLPLLL-LE-PRGL---RP-ALRP-WLLLLLLAL   77 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcc-cCChHHHHHHHHHHHHHHHHHHHH-hh-cccc---cc-cccc-hHHHHHHHH
Confidence            457788888889999999988888774 244555555455444444221111 11 0000   00 0111 234455555


Q ss_pred             HHHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHH-HhcCCCCchhhhhhHHHHHHHHHHHhhhccc
Q 018894          231 LISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGY-VLLHDPFSWRNILGILIAVIGMVLYSYCCSL  299 (349)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~-~~~~e~~t~~~~~G~~lii~g~~l~~~~~~~  299 (349)
                      +.........+..+++.++...+...+..|++..+++. ++++|+++..++.|..+.+.|+.+.......
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~  147 (292)
T COG0697          78 LGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGG  147 (292)
T ss_pred             HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCc
Confidence            55555667777889999999999999999999999996 7779999999999999999999998765443

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=97.67  E-value=0.00011  Score=64.07  Aligned_cols=133  Identities=16%  Similarity=0.205  Sum_probs=87.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHH
Q 018894          153 GSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLI  232 (349)
Q Consensus       153 G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (349)
                      |++.+++|+++++...|=.||.-.   -|++..+.+++....+..++...+.+.             +.+..+..++|.+
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~~---gDg~~fQw~~~~~i~~~g~~v~~~~~~-------------p~f~p~amlgG~l   64 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFDT---GDGFFFQWVMCSGIFLVGLVVNLILGF-------------PPFYPWAMLGGAL   64 (254)
T ss_pred             CchhHHHHHHHhcccceeeEeccC---CCcHHHHHHHHHHHHHHHHHHHHhcCC-------------CcceeHHHhhhhh
Confidence            677889999999999998887654   378877777765555444444332221             1123355556555


Q ss_pred             HHHHHHHHHHhhcccC-cchhhhhhhhhHHHHHHHHHH-hcCCC-----CchhhhhhHHHHHHHHHHHhhhccccc
Q 018894          233 SVSVNFSTFLVIGKTS-PVTYQVLGHLKTCLVLAFGYV-LLHDP-----FSWRNILGILIAVIGMVLYSYCCSLES  301 (349)
Q Consensus       233 ~~~~~~~~~~~~~~~~-a~~~s~~~~~~~v~~~~~~~~-~~~e~-----~t~~~~~G~~lii~g~~l~~~~~~~~~  301 (349)
                      =...|....-+++.+| +....+.+...-+.+...+-+ +||++     -++.+.+|++++++|..+|...|..++
T Consensus        65 W~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~~  140 (254)
T PF07857_consen   65 WATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEEK  140 (254)
T ss_pred             hhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCCC
Confidence            5555666666666654 334455666666777776654 56543     457899999999999999988776653

The region concerned is approximately 280 residues long.

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.67  E-value=0.00033  Score=53.91  Aligned_cols=71  Identities=17%  Similarity=0.147  Sum_probs=61.8

Q ss_pred             hHHHHHHHHHHHHhhcceeccccchhHHHHH-hhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeee
Q 018894           74 AVMGFGVLNGISIGLLNLSLGFNSVGFYQMT-KLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATV  144 (349)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~al~~~~~s~~~~l-~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~  144 (349)
                      ......+++++..++...+++++|.+.+..+ ....-+.+.+.+++++||+++..+++++.++++|++.+-.
T Consensus        32 ~~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l  103 (120)
T PRK10452         32 GFILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKS  103 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Confidence            3445566777888999999999999997766 5799999999999999999999999999999999987754

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=97.62  E-value=0.00037  Score=61.76  Aligned_cols=207  Identities=12%  Similarity=0.117  Sum_probs=120.0

Q ss_pred             hHHHHHHH-HHHHHhhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeeccccc---
Q 018894           74 AVMGFGVL-NGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVTDLQL---  149 (349)
Q Consensus        74 ~~~~~~~~-~~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~~~~~---  149 (349)
                      ++++.|++ .+++-.+.+.|+.+-|.+..+-+.++..+..++++..++|||++....+|..++++|-.+++...+..   
T Consensus        65 ~~Ww~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i  144 (335)
T KOG2922|consen   65 PLWWAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEI  144 (335)
T ss_pred             HHHHHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCccccc
Confidence            45555654 56788999999999999999999999999999999999999999999999999999999887522111   


Q ss_pred             -----------c--hhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHH--------H--Hhhhc
Q 018894          150 -----------N--VLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFII--------G--PFLDG  206 (349)
Q Consensus       150 -----------~--~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~--------~--~~~~~  206 (349)
                                 +  ++.+...++-.+  .+-..+.   .++++  ...++.|..+.+.+-.+-+        +  ....+
T Consensus       145 ~t~~el~~~~~~~~Fliy~~~iil~~--~il~~~~---~p~~g--~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g  217 (335)
T KOG2922|consen  145 ESVEEVWELATEPGFLVYVIIIILIV--LILIFFY---APRYG--QTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSG  217 (335)
T ss_pred             ccHHHHHHHhcCccHHHHHHHHHHHH--HHHheee---ccccc--ccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcC
Confidence                       1  111111111111  1111111   11111  1222333333333221100        0  11111


Q ss_pred             ccccccccccccCchhHHHHHHHHHHHHHHHHHHHHhhcccCcchhhhhhh-hhHHHHHHHHHHhcCC--CCch----hh
Q 018894          207 LLTNKNVFAFKYTPYVLFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGH-LKTCLVLAFGYVLLHD--PFSW----RN  279 (349)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~-~~~v~~~~~~~~~~~e--~~t~----~~  279 (349)
                      ..+      .. .+..+.+++....+........+.+++..++...+.+.+ +-..++++-+.++|+|  ..+.    ..
T Consensus       218 ~~q------l~-~~~ty~~~l~~~~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~  290 (335)
T KOG2922|consen  218 NNQ------LF-YPLTWIFLLVVATCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGE  290 (335)
T ss_pred             Ccc------cc-cHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHH
Confidence            111      11 223333333333333333334567777766665555544 3466888889999987  3443    34


Q ss_pred             hhhHHHHHHHHHHHh
Q 018894          280 ILGILIAVIGMVLYS  294 (349)
Q Consensus       280 ~~G~~lii~g~~l~~  294 (349)
                      +.|...+++|+.+.+
T Consensus       291 ~~Gf~ti~~G~flL~  305 (335)
T KOG2922|consen  291 LCGFVTIFLGIFLLH  305 (335)
T ss_pred             HHhHHHhhheeeEee
Confidence            568888888887764

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.55  E-value=0.00077  Score=50.97  Aligned_cols=67  Identities=15%  Similarity=0.074  Sum_probs=56.9

Q ss_pred             HHHHHHHHHHHhhcceeccccchhHHH-HHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheee
Q 018894           76 MGFGVLNGISIGLLNLSLGFNSVGFYQ-MTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIA  142 (349)
Q Consensus        76 ~~~~~~~~~~~~~~~~al~~~~~s~~~-~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~  142 (349)
                      ....+++.+..++...+++++|.+++. +-....-+.+.+.+++++||+++..++.++.+++.|++..
T Consensus        39 ~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         39 ILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            334556677888888999999999955 5556888999999999999999999999999999999864

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.55  E-value=0.0023  Score=58.49  Aligned_cols=75  Identities=28%  Similarity=0.471  Sum_probs=64.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhcc
Q 018894          224 FFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCS  298 (349)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~  298 (349)
                      +.-+.-+++=...++....+.++++.+...++.....+++.++++++++++.++.+++|+++++.|+.+......
T Consensus        80 w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~  154 (334)
T PF06027_consen   80 WKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDV  154 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecc
Confidence            333444566666799999999999999999999999999999999999999999999999999999988765443

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.49  E-value=0.00077  Score=51.21  Aligned_cols=68  Identities=19%  Similarity=0.195  Sum_probs=58.4

Q ss_pred             HHHHHHHHHHhhcceeccccchhHHHHH-hhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeee
Q 018894           77 GFGVLNGISIGLLNLSLGFNSVGFYQMT-KLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATV  144 (349)
Q Consensus        77 ~~~~~~~~~~~~~~~al~~~~~s~~~~l-~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~  144 (349)
                      ..-+++++..++...+++++|.+.+..+ ....-+.+.+.+++++||+++..++.++.++++|++..-.
T Consensus        35 ~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            3445666777888889999999997766 5688999999999999999999999999999999998754

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=97.47  E-value=2.8e-05  Score=66.00  Aligned_cols=203  Identities=15%  Similarity=0.185  Sum_probs=135.3

Q ss_pred             HHHHHHHHhhcceeccccchhHHHHHh-hhHHHHHHHHHHHHhccccchhh----hHHHHHhhhhheeeeecccc---c-
Q 018894           79 GVLNGISIGLLNLSLGFNSVGFYQMTK-LAIIPCTILLETLFFRKKFSRNI----QLSLVILLVGVGIATVTDLQ---L-  149 (349)
Q Consensus        79 ~~~~~~~~~~~~~al~~~~~s~~~~l~-~~~pi~~~~l~~~~~~e~~s~~~----~~~i~l~~~Gv~l~~~~~~~---~-  149 (349)
                      |++...+....+.|+++.++|.+.-+. .+.-+-+-+++++.++|-.+..+    ..++++++.|+.+.++.|.+   . 
T Consensus        66 G~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~  145 (288)
T COG4975          66 GAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEE  145 (288)
T ss_pred             hhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecccccccc
Confidence            566677788889999999888876554 45667778899999999987766    46888999999999986531   1 


Q ss_pred             ----chhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHH
Q 018894          150 ----NVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFF  225 (349)
Q Consensus       150 ----~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (349)
                          .-.|+...+.|.+.|-.|.+..|...    .|.+....-+. .+.++..........+        ...+.. .+.
T Consensus       146 ~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~----v~g~saiLPqA-iGMv~~ali~~~~~~~--------~~~~K~-t~~  211 (288)
T COG4975         146 NPSNLKKGIVILLISTLGYVGYVVLFQLFD----VDGLSAILPQA-IGMVIGALILGFFKME--------KRFNKY-TWL  211 (288)
T ss_pred             ChHhhhhheeeeeeeccceeeeEeeecccc----ccchhhhhHHH-HHHHHHHHHHhhcccc--------cchHHH-HHH
Confidence                13689999999999999999877654    34443333222 2322222221111110        011111 233


Q ss_pred             HHHHHHHHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhh----hhHHHHHHHHHHHhh
Q 018894          226 IVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNI----LGILIAVIGMVLYSY  295 (349)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~----~G~~lii~g~~l~~~  295 (349)
                      -+..|++=..-|...+.+.++.+-.+.=.++.+-.+++.+-++++++|+-|..++    +|++++++|..+...
T Consensus       212 nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg~  285 (288)
T COG4975         212 NIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLGI  285 (288)
T ss_pred             HHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhhe
Confidence            4444554444566666666666655555566677889999999999999998775    478888888776543

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.44  E-value=0.00089  Score=50.33  Aligned_cols=69  Identities=14%  Similarity=0.013  Sum_probs=58.6

Q ss_pred             HHHHHHHHHHHHhhcceeccccchhHHH-HHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeee
Q 018894           75 VMGFGVLNGISIGLLNLSLGFNSVGFYQ-MTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIAT  143 (349)
Q Consensus        75 ~~~~~~~~~~~~~~~~~al~~~~~s~~~-~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~  143 (349)
                      .....++++...++...+++++|.+++. +-.....+.+.+.+++++||+++..++.++.+++.|++..-
T Consensus        32 ~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         32 SIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence            3444566777888888999999999955 55558899999999999999999999999999999998763

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.40  E-value=0.0011  Score=49.43  Aligned_cols=70  Identities=29%  Similarity=0.233  Sum_probs=59.0

Q ss_pred             hHHHHHHHHHHHHhhcceeccccchhH-HHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeee
Q 018894           74 AVMGFGVLNGISIGLLNLSLGFNSVGF-YQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIAT  143 (349)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~al~~~~~s~-~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~  143 (349)
                      .....-+++.....+...+++++|.++ +.+-...-.+.+++.+++++||+++..+++++.+++.|++..-
T Consensus        32 ~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk  102 (106)
T COG2076          32 PSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLK  102 (106)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhh
Confidence            344445667778888889999999999 5566678889999999999999999999999999999998653

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.35  E-value=0.0049  Score=47.51  Aligned_cols=59  Identities=20%  Similarity=0.319  Sum_probs=47.1

Q ss_pred             HHHHHhhcccCc-chhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhh
Q 018894          238 FSTFLVIGKTSP-VTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYC  296 (349)
Q Consensus       238 ~~~~~~~~~~~a-~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~  296 (349)
                      +....++++.+- ..+++...+.-+.+.++++++|+|++|+.+++|++++++|++..+..
T Consensus        45 ~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~  104 (120)
T PRK10452         45 IFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG  104 (120)
T ss_pred             HHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence            344455666543 34566667888999999999999999999999999999999888654

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.35  E-value=0.0088  Score=47.67  Aligned_cols=138  Identities=16%  Similarity=0.130  Sum_probs=97.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHH
Q 018894          151 VLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSC  230 (349)
Q Consensus       151 ~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (349)
                      .+..++++.+.++...+.-..-++.+..+ +|.......+..|++.+.....+.++.....      .-...-++...+|
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~-spl~As~isf~vGt~~L~~l~l~~~~~~~~a------~~~~~pwW~~~GG   76 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLG-SPLLASLISFLVGTVLLLILLLIKQGHPGLA------AVASAPWWAWIGG   76 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCchh------hccCCchHHHHcc
Confidence            46788899999999999999999888554 7888888888888888877766644332211      1112224555666


Q ss_pred             HHHHHHHHHHHHhhcccCcchhhhhhhh-hHHHHHHHHHHhcC----CCCchhhhhhHHHHHHHHHHHhh
Q 018894          231 LISVSVNFSTFLVIGKTSPVTYQVLGHL-KTCLVLAFGYVLLH----DPFSWRNILGILIAVIGMVLYSY  295 (349)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~a~~~s~~~~~-~~v~~~~~~~~~~~----e~~t~~~~~G~~lii~g~~l~~~  295 (349)
                      +++..+-........+.++..+..+-.. +-+.+.+++.+=+.    .++++..++|++++++|+++.+.
T Consensus        77 ~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~  146 (150)
T COG3238          77 LLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARR  146 (150)
T ss_pred             chhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcc
Confidence            7777666666677788777766555444 44566666665443    58999999999999999666543

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.31  E-value=0.0036  Score=55.14  Aligned_cols=127  Identities=13%  Similarity=0.009  Sum_probs=79.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHhh
Q 018894            9 LGTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFDPRAVMGFGVLNGISIGL   88 (349)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (349)
                      .+.+...++--+.........|+.-.     .|+...+-|.+...+....+......+.+++...+-+..|++...++.+
T Consensus       137 ~kgi~~Ll~stigy~~Y~~~~~~~~~-----~~~~~~lPqaiGm~i~a~i~~~~~~~~~~~k~~~~nil~G~~w~ignl~  211 (269)
T PF06800_consen  137 KKGILALLISTIGYWIYSVIPKAFHV-----SGWSAFLPQAIGMLIGAFIFNLFSKKPFFEKKSWKNILTGLIWGIGNLF  211 (269)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhcCC-----ChhHhHHHHHHHHHHHHHHHhhcccccccccchHHhhHHHHHHHHHHHH
Confidence            33444444444444445555555322     2555554444444333333333222222222223334568889999999


Q ss_pred             cceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhH----HHHHhhhhhe
Q 018894           89 LNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQL----SLVILLVGVG  140 (349)
Q Consensus        89 ~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~----~i~l~~~Gv~  140 (349)
                      +..+.+....+.+..+.++.+++..+.+.+++||+-+++++.    +++++++|.+
T Consensus       212 ~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i  267 (269)
T PF06800_consen  212 YLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI  267 (269)
T ss_pred             HHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence            999999999999999999999999999999999999888654    4455555544

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.25  E-value=0.01  Score=44.94  Aligned_cols=56  Identities=20%  Similarity=0.432  Sum_probs=46.4

Q ss_pred             HHHHhhcccC-cchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHh
Q 018894          239 STFLVIGKTS-PVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYS  294 (349)
Q Consensus       239 ~~~~~~~~~~-a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~  294 (349)
                      ....++|+.+ .+.+++...+..+.+.+.++++|+|++++.+++|+++++.|++..+
T Consensus        51 ~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         51 ALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            3344566644 3456788888899999999999999999999999999999998864

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.23  E-value=0.0013  Score=57.76  Aligned_cols=77  Identities=26%  Similarity=0.381  Sum_probs=68.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhccc
Q 018894          223 LFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSL  299 (349)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~~  299 (349)
                      .......+++-...+...+.++++.+|.+..++...+.+++.++++++++.+++..||+++.+..+|+.+.......
T Consensus        17 ~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~   93 (244)
T PF04142_consen   17 TLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ   93 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence            45566777777788889999999999999999999999999999999999999999999999999999988765443

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.22  E-value=0.002  Score=47.47  Aligned_cols=58  Identities=21%  Similarity=0.130  Sum_probs=35.4

Q ss_pred             HHHHHHHHHhhcceeccccchhHHHH-HhhhHHHHHHHHHHHHhccccchhhhHHHHHh
Q 018894           78 FGVLNGISIGLLNLSLGFNSVGFYQM-TKLAIIPCTILLETLFFRKKFSRNIQLSLVIL  135 (349)
Q Consensus        78 ~~~~~~~~~~~~~~al~~~~~s~~~~-l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~  135 (349)
                      ...++++..++...+++++|.+.+.. ......+.+.+.+.+++||++|..++.++.++
T Consensus        35 ~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   35 AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            34467788889999999999999654 56799999999999999999999999999864

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.05  E-value=0.0022  Score=58.04  Aligned_cols=119  Identities=14%  Similarity=0.235  Sum_probs=82.0

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHH
Q 018894          150 NVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLS  229 (349)
Q Consensus       150 ~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (349)
                      ...|..++++++++.+....+.|+..++.+.++..-..                        ...+. .....|+.....
T Consensus         5 ~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~~------------------------~~~~~-l~~~~W~~G~~~   59 (300)
T PF05653_consen    5 FYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAGS------------------------GGRSY-LRRPLWWIGLLL   59 (300)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc------------------------hhhHH-HhhHHHHHHHHH
Confidence            45799999999999999999999977643211110000                        00000 001122232332


Q ss_pred             HHHHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhh
Q 018894          230 CLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYC  296 (349)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~  296 (349)
                      ..++   ....+.+....++...+.++.+.-++..+++.++++|+++...+.|++++++|..+.-..
T Consensus        60 ~~~g---~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~  123 (300)
T PF05653_consen   60 MVLG---EILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIF  123 (300)
T ss_pred             Hhcc---hHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEe
Confidence            2333   344455677788888888999999999999999999999999999999999999876543

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.00  E-value=0.0054  Score=56.20  Aligned_cols=141  Identities=14%  Similarity=0.091  Sum_probs=91.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccc--cccccCchhHHHHHH
Q 018894          151 VLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNV--FAFKYTPYVLFFIVL  228 (349)
Q Consensus       151 ~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  228 (349)
                      ..|+++.+++++|++...+-.|| .|+   -+++.. |. . +.++...+.++..+....++.  .-...+...+....+
T Consensus         6 ~~G~~~~~i~~~~~GS~~~p~K~-~k~---w~wE~~-W~-v-~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l   78 (345)
T PRK13499          6 ILGIIWHLIGGASSGSFYAPFKK-VKK---WSWETM-WS-V-GGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFL   78 (345)
T ss_pred             HHHHHHHHHHHHHhhcccccccc-cCC---CchhHH-HH-H-HHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHH
Confidence            46999999999999999988888 442   345555 44 2 222332222322111111111  111245666777777


Q ss_pred             HHHHHHHHHHHHHHhhcccCcch-hhhhhhhhHHHHHHHHHHhcCCCC---c----hhhhhhHHHHHHHHHHHhhhcc
Q 018894          229 SCLISVSVNFSTFLVIGKTSPVT-YQVLGHLKTCLVLAFGYVLLHDPF---S----WRNILGILIAVIGMVLYSYCCS  298 (349)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~a~~-~s~~~~~~~v~~~~~~~~~~~e~~---t----~~~~~G~~lii~g~~l~~~~~~  298 (349)
                      +|++=..-+...+..+++.+-.. ..+..-+.-+.+.+++.+++||=.   +    ..-++|++++++|+.+..+.-.
T Consensus        79 ~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~  156 (345)
T PRK13499         79 FGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQ  156 (345)
T ss_pred             HHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhh
Confidence            88777777888888888877554 444555788899999999998632   2    3467799999999999987433

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=96.95  E-value=0.009  Score=45.36  Aligned_cols=57  Identities=9%  Similarity=0.290  Sum_probs=46.4

Q ss_pred             HHHhhcccCc-chhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhh
Q 018894          240 TFLVIGKTSP-VTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYC  296 (349)
Q Consensus       240 ~~~~~~~~~a-~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~  296 (349)
                      ...++++.+- ..+++...+..+.+.+.++++|+|++++.+++|++++++|++..+..
T Consensus        47 l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~  104 (110)
T PRK09541         47 LAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL  104 (110)
T ss_pred             HHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            3345666443 34566677788999999999999999999999999999999998654

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.94  E-value=0.0086  Score=45.03  Aligned_cols=56  Identities=18%  Similarity=0.192  Sum_probs=47.1

Q ss_pred             HHHhhcccC-cchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhh
Q 018894          240 TFLVIGKTS-PVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSY  295 (349)
Q Consensus       240 ~~~~~~~~~-a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~  295 (349)
                      ...++|+.+ .+.+++...+..+.+.++++++|+|++++.+++|+.++++|++..+.
T Consensus        46 Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         46 LAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            334566644 45578888899999999999999999999999999999999998764

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=96.85  E-value=0.00027  Score=60.95  Aligned_cols=136  Identities=15%  Similarity=0.176  Sum_probs=88.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHH
Q 018894          152 LGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCL  231 (349)
Q Consensus       152 ~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (349)
                      .|..+..++ ..+....+..++...   .+|.++.......-.++..+.......+..  ..    ...+  .++++=|+
T Consensus        38 ~gl~l~~vs-~ff~~~~vv~t~~~e---~~p~e~a~~r~l~~mlit~pcliy~~~~v~--gp----~g~R--~~LiLRg~  105 (346)
T KOG4510|consen   38 LGLLLLTVS-YFFNSCMVVSTKVLE---NDPMELASFRLLVRMLITYPCLIYYMQPVI--GP----EGKR--KWLILRGF  105 (346)
T ss_pred             cCceehhhH-HHHhhHHHhhhhhhc---cChhHhhhhhhhhehhhhheEEEEEeeeee--cC----CCcE--EEEEeehh
Confidence            577777777 666777777777664   467766665533332222222211111110  00    0001  12233444


Q ss_pred             HHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhccc
Q 018894          232 ISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSL  299 (349)
Q Consensus       232 ~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~~  299 (349)
                      .++..-+..+++.++.+-..+.++....|+++.++++.+++|+.|....+|..+.+.|+++..+....
T Consensus       106 mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFl  173 (346)
T KOG4510|consen  106 MGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFL  173 (346)
T ss_pred             hhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcc
Confidence            44444555666778888888889999999999999999999999999999999999999998765544

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=96.73  E-value=0.019  Score=49.43  Aligned_cols=125  Identities=8%  Similarity=-0.042  Sum_probs=81.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHccccccCCCCchhHHHHH----HHHH-HH
Q 018894           11 TVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEHKPFDPRAVMGFG----VLNG-IS   85 (349)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~   85 (349)
                      .+.+.+.-+.+..+..+.-|.+=+  .-+.+..+. .-+.++.++.+++-...--  +.......++.+    ++.. +-
T Consensus       149 Gv~~Al~AG~~Wa~YIv~G~r~g~--~~~g~~g~a-~gm~vAaviv~Pig~~~ag--~~l~~p~ll~laLgvavlSSalP  223 (292)
T COG5006         149 GVALALGAGACWALYIVLGQRAGR--AEHGTAGVA-VGMLVAALIVLPIGAAQAG--PALFSPSLLPLALGVAVLSSALP  223 (292)
T ss_pred             HHHHHHHHhHHHHHHHHHcchhcc--cCCCchHHH-HHHHHHHHHHhhhhhhhcc--hhhcChHHHHHHHHHHHHhcccc
Confidence            344444555555555555555543  122233333 5666666666665431111  111123333333    3332 34


Q ss_pred             HhhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhhe
Q 018894           86 IGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVG  140 (349)
Q Consensus        86 ~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~  140 (349)
                      +.+...++.+.|..++.++.++.|.+-++.++++++|++|..||+++..++.+..
T Consensus       224 YsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa  278 (292)
T COG5006         224 YSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA  278 (292)
T ss_pred             hHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence            5677889999999999999999999999999999999999999999998887765

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.66  E-value=0.016  Score=43.25  Aligned_cols=56  Identities=16%  Similarity=0.282  Sum_probs=47.7

Q ss_pred             HHhhcccC-cchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhh
Q 018894          241 FLVIGKTS-PVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYC  296 (349)
Q Consensus       241 ~~~~~~~~-a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~  296 (349)
                      -.++|+.+ .+.+++..-+-.+.+.+.++++|+|+++..+++|+.+++.|++..+..
T Consensus        48 s~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          48 SLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             HHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence            34566644 345788888999999999999999999999999999999999988754

>TIGR00803 nst UDP-galactose transporter

Probab=96.60  E-value=0.065  Score=46.31  Aligned_cols=67  Identities=15%  Similarity=0.097  Sum_probs=58.6

Q ss_pred             HHHHHHHHHHHHhhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhhee
Q 018894           75 VMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGI  141 (349)
Q Consensus        75 ~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l  141 (349)
                      .....++...+..+..+.+++.+.....+...+.++++.+++.++++++++..++.|..+.+.|+.+
T Consensus       155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            3334455666777888999999999999999999999999999999999999999999999998764

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=96.31  E-value=0.17  Score=46.00  Aligned_cols=141  Identities=12%  Similarity=0.146  Sum_probs=93.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhc--CCCHHHHHHHhhHHHHHHHHHHHHhhhcc--cccccccccc--cCchhHHHHH
Q 018894          154 SVLSLLAVLTTCVAQIMTNTIQKKF--KVSSTQLLYQSCPYQALTLFIIGPFLDGL--LTNKNVFAFK--YTPYVLFFIV  227 (349)
Q Consensus       154 ~~~~l~s~~~~a~~~v~~k~~~~~~--~~~~~~~~~~~~~~~~i~l~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~  227 (349)
                      .+..++..+-.+......|...++.  +..|....+..=+.-.++.+.....-+..  ..........  ..+....-+.
T Consensus        17 ~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~   96 (345)
T KOG2234|consen   17 YLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVS   96 (345)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHH
Confidence            3344444555556666666555432  45666666666555555555444333211  0000001111  1121233455


Q ss_pred             HHHHHHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHh
Q 018894          228 LSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYS  294 (349)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~  294 (349)
                      ...++-.+.|-..+....+.+|.+..+...++...+.+++.++++++++..||...++...|+.+.+
T Consensus        97 vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ  163 (345)
T KOG2234|consen   97 VPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQ  163 (345)
T ss_pred             HHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence            5566666777788888999999999999999999999999999999999999999999999998887

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.22  E-value=0.0091  Score=45.29  Aligned_cols=65  Identities=23%  Similarity=0.181  Sum_probs=55.5

Q ss_pred             HHHHHHHHHhhcceeccccchhHHHHH-hhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheee
Q 018894           78 FGVLNGISIGLLNLSLGFNSVGFYQMT-KLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIA  142 (349)
Q Consensus        78 ~~~~~~~~~~~~~~al~~~~~s~~~~l-~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~  142 (349)
                      .-+++..+...+++.++..+.|.+.-+ .+++-++|++.++++.+|..+++.+.|+.+++.|+.+.
T Consensus        47 pf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   47 PFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            345566677788888999999997766 58999999999999888989999999999999999875

Many members are annotated as potential transmembrane proteins.

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=95.90  E-value=0.32  Score=38.58  Aligned_cols=116  Identities=14%  Similarity=0.031  Sum_probs=76.4

Q ss_pred             HHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHcccc-ccC-CCCchhHHH-HHHHHHHHHhhcceeccccchhH
Q 018894           24 SIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLF-EHK-PFDPRAVMG-FGVLNGISIGLLNLSLGFNSVGF  100 (349)
Q Consensus        24 ~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~-~~~-~~~~~~~~~-~~~~~~~~~~~~~~al~~~~~s~  100 (349)
                      ....+|-.+-+.  ...|+.-++..+..+.+.+..+....+. +.+ ..+.+++.+ .|++......+.......++++.
T Consensus        15 ~q~~~N~~L~~~--~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~~lGG~lG~~~V~~~~~~vp~lG~~~   92 (138)
T PF04657_consen   15 LQAAFNGQLGKA--LGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWAYLGGLLGVFFVLSNIILVPRLGAAL   92 (138)
T ss_pred             HHHHHHHHHHHH--hCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHHhccHHHHHHHHHHHHHHhhhhhHHH
Confidence            334455555543  2248888999999999877666543332 222 122234444 45666677778888889988888


Q ss_pred             HHHHhhh-HHHHHHHHHHH----HhccccchhhhHHHHHhhhhhee
Q 018894          101 YQMTKLA-IIPCTILLETL----FFRKKFSRNIQLSLVILLVGVGI  141 (349)
Q Consensus       101 ~~~l~~~-~pi~~~~l~~~----~~~e~~s~~~~~~i~l~~~Gv~l  141 (349)
                      ...+.-+ +-+...+++.+    .-|++++..+.+++.+.++|+.+
T Consensus        93 ~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   93 TTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            6665544 44555556664    34788999999999999999864

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=95.86  E-value=0.083  Score=38.85  Aligned_cols=49  Identities=20%  Similarity=0.175  Sum_probs=27.2

Q ss_pred             HHHHHhhcccCcchh-hhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHH
Q 018894          238 FSTFLVIGKTSPVTY-QVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIA  286 (349)
Q Consensus       238 ~~~~~~~~~~~a~~~-s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~li  286 (349)
                      +....++|+.+...+ ++...+..+...+.+.++|||++|+.+++|++++
T Consensus        44 ~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   44 YFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            344456777655444 6777788999999999999999999999998875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=94.99  E-value=0.22  Score=44.27  Aligned_cols=134  Identities=8%  Similarity=-0.021  Sum_probs=94.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHH-HHccc-------cccCCCCchhHHHH
Q 018894            7 FQLGTVGALSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVA-LWMKL-------FEHKPFDPRAVMGF   78 (349)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~-~~~~~-------~~~~~~~~~~~~~~   78 (349)
                      ++......+..+..+=-..+-..+.++.+.+... +.+.+.-=+...+.-... ...+.       .+..+.-+++++..
T Consensus       169 ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~-~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~  247 (327)
T KOG1581|consen  169 NSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSS-LHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLY  247 (327)
T ss_pred             CchHhHHHHHHHHHHHhhHHhHHHHHhccCCccH-hHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHH
Confidence            3455556666666666666777888887655443 333222222222222222 11221       12234446789999


Q ss_pred             HHHHHHHHhhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhhee
Q 018894           79 GVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGI  141 (349)
Q Consensus        79 ~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l  141 (349)
                      +.+...+..+.+.-++.-++-+.+++..+-=++...++.+.++.+++..||.++...++|+.+
T Consensus       248 s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l  310 (327)
T KOG1581|consen  248 STCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL  310 (327)
T ss_pred             HHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence            999999999999999998888889999999999999999999999999999999988888764

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=94.84  E-value=0.042  Score=49.79  Aligned_cols=138  Identities=17%  Similarity=0.062  Sum_probs=94.2

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHhh--cCCChHHHHHHHHHHHHHHHHH-HHHHcccccc----C--CCCch--h
Q 018894            6 KFQLGTVGALSLSVISSVSIVICNKALISS--LGFTFATTLTSWHLLVTFCSLH-VALWMKLFEH----K--PFDPR--A   74 (349)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~K~v~~~--~~~~~p~~~~~~r~~~~~l~l~-~~~~~~~~~~----~--~~~~~--~   74 (349)
                      +..+.+......+.+....-+++.|.++.+  ...+ +..+..+.--.+.+.+. ++........    .  ..+..  .
T Consensus       159 ~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~  237 (316)
T KOG1441|consen  159 SFNLFGFISAMISNLAFALRNILSKKLLTSKGESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLI  237 (316)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccC-chHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHH
Confidence            345555656666666666677788888853  2333 55666566666666666 5433211111    1  11122  2


Q ss_pred             HHHHHHHHHHHHhhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeee
Q 018894           75 VMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATV  144 (349)
Q Consensus        75 ~~~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~  144 (349)
                      +...+++..+.+...++.+.++++=++++.....=+++...+++++++++|..+..|..+.++|+.+...
T Consensus       238 ~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~  307 (316)
T KOG1441|consen  238 LLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSR  307 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHH
Confidence            2233566667778888899999999999999888888999999999999999999999999999987653

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=94.60  E-value=0.11  Score=44.22  Aligned_cols=64  Identities=20%  Similarity=0.319  Sum_probs=56.4

Q ss_pred             HHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhccc
Q 018894          236 VNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSL  299 (349)
Q Consensus       236 ~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~~  299 (349)
                      ....++.+++..+--+.-+-...+|+...++|+.+.+..-+|....-...|++|++++.+.+.|
T Consensus        98 AMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~K  161 (337)
T KOG1580|consen   98 AMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENK  161 (337)
T ss_pred             HHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccc
Confidence            4567788899988888888889999999999999999999999999999999999999875444

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=94.52  E-value=0.056  Score=49.26  Aligned_cols=75  Identities=13%  Similarity=0.289  Sum_probs=62.8

Q ss_pred             HHHHHHHHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhcccc
Q 018894          226 IVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLE  300 (349)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~~~  300 (349)
                      .+.-+.+=++.++.++.++++++....+++.....+++..++.++-+|++|+.+.++..+.+.|+++.++.+.++
T Consensus       162 sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~  236 (416)
T KOG2765|consen  162 SLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ  236 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence            334444444557777788888898889999999999999999999999999999999999999999998875543

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=94.43  E-value=0.026  Score=48.46  Aligned_cols=131  Identities=17%  Similarity=0.118  Sum_probs=86.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHHHHHHH
Q 018894          153 GSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIVLSCLI  232 (349)
Q Consensus       153 G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (349)
                      +++++++=++.|+.--....|...    +|.+...-+.+ +++++.+...+...         ...+...+...+.+|++
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~GG----~p~qQ~lGtT~-GALifaiiv~~~~~---------p~~T~~~~iv~~isG~~   68 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKFGG----KPYQQTLGTTL-GALIFAIIVFLFVS---------PELTLTIFIVGFISGAF   68 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeecCC----ChhHhhhhccH-HHHHHHHHHheeec---------CccchhhHHHHHHhhhH
Confidence            567788888888886665554432    56665555554 44333332222211         12345556666777766


Q ss_pred             HHHHHHHHHHhhcccCcchhhhhhh-hhHHHHHHHHHHhcCCCCchhhhh----hHHHHHHHHHHHhhhc
Q 018894          233 SVSVNFSTFLVIGKTSPVTYQVLGH-LKTCLVLAFGYVLLHDPFSWRNIL----GILIAVIGMVLYSYCC  297 (349)
Q Consensus       233 ~~~~~~~~~~~~~~~~a~~~s~~~~-~~~v~~~~~~~~~~~e~~t~~~~~----G~~lii~g~~l~~~~~  297 (349)
                      =.+-+...+.+++..+..++..+++ ++-+-+.++++++|||=.+..+++    ..+++++|+.+.++.+
T Consensus        69 Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~  138 (288)
T COG4975          69 WSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQD  138 (288)
T ss_pred             hhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeec
Confidence            6666778888888888877776655 677888999999999977766654    5677888887776543

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=93.79  E-value=0.45  Score=36.15  Aligned_cols=53  Identities=23%  Similarity=0.375  Sum_probs=40.7

Q ss_pred             HHHhhcccCcchhh-hhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHH
Q 018894          240 TFLVIGKTSPVTYQ-VLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVL  292 (349)
Q Consensus       240 ~~~~~~~~~a~~~s-~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l  292 (349)
                      +++.+++.+-+.+. +.+.+.-+++++.++++.+|..+...++|+++++.|+.+
T Consensus        58 f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   58 FFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence            34445555544444 446888999999999888888899999999999999864

Many members are annotated as potential transmembrane proteins.

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=93.69  E-value=0.0067  Score=54.01  Aligned_cols=125  Identities=16%  Similarity=0.251  Sum_probs=87.5

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccccccccccccCchhHHHHH
Q 018894          148 QLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLTNKNVFAFKYTPYVLFFIV  227 (349)
Q Consensus       148 ~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (349)
                      ..+..|.++++.+++..+...++.||..++...                        .+.....+..+.-.. ..||..+
T Consensus        17 ~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~------------------------~~~ra~~gg~~yl~~-~~Ww~G~   71 (335)
T KOG2922|consen   17 SDNIIGLVLAISSSIFIGSSFILKKKGLKRAGA------------------------SGLRAGEGGYGYLKE-PLWWAGM   71 (335)
T ss_pred             cCceeeeeehhhccEEEeeehhhhHHHHHHHhh------------------------hcccccCCCcchhhh-HHHHHHH
Confidence            345689999999999999999999888774321                        000001111111111 2445555


Q ss_pred             HHHHHHHHHHHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhcccc
Q 018894          228 LSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCCSLE  300 (349)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~~~~  300 (349)
                      +.-.++   ....|.+....+++-.+.++.+.-+...+++..+++|++++...+|++++++|.........++
T Consensus        72 ltm~vG---ei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e  141 (335)
T KOG2922|consen   72 LTMIVG---EIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKE  141 (335)
T ss_pred             HHHHHH---hHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcc
Confidence            555555   4444445667788888889999999999999999999999999999999999987776554443

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=92.20  E-value=4.3  Score=32.52  Aligned_cols=123  Identities=13%  Similarity=0.016  Sum_probs=73.5

Q ss_pred             HHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHcccccc-C--CCCchhHHHH-HHHHHHHHhhcceecc
Q 018894           19 VISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALWMKLFEH-K--PFDPRAVMGF-GVLNGISIGLLNLSLG   94 (349)
Q Consensus        19 ~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~-~--~~~~~~~~~~-~~~~~~~~~~~~~al~   94 (349)
                      +.+....+-.|-.+-+  ....|..-.+..+..+..++..+...+..+. .  ..+.++|.+. |++.............
T Consensus        14 G~~l~~Q~~iN~qL~~--~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lGa~~vt~s~~l~p   91 (150)
T COG3238          14 GALLPLQAAINGRLAR--YLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLGAIFVTSSILLAP   91 (150)
T ss_pred             hhhhhhHHHHHHHHHH--HcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchhhhhhhhhHHhcc
Confidence            3333333445555554  2345889999999998887776654432222 1  1233444444 3444444445555566


Q ss_pred             ccchhHHH-HHhhhHHHHHHHHHHHHh----ccccchhhhHHHHHhhhhheeee
Q 018894           95 FNSVGFYQ-MTKLAIIPCTILLETLFF----RKKFSRNIQLSLVILLVGVGIAT  143 (349)
Q Consensus        95 ~~~~s~~~-~l~~~~pi~~~~l~~~~~----~e~~s~~~~~~i~l~~~Gv~l~~  143 (349)
                      .+.++... .+-+..-+.-++++.+=+    +++++..++.++++.++|+.+..
T Consensus        92 ~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~  145 (150)
T COG3238          92 RLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR  145 (150)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence            66655544 444555666666666533    47789999999999999965543

>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4)

Probab=90.75  E-value=0.072  Score=46.50  Aligned_cols=102  Identities=11%  Similarity=0.120  Sum_probs=0.0

Q ss_pred             ceeccccchhHHHHHhhhHHHHHHHHH-HHHhcccc-chhhhHHHHHhhhhheeeeecc--cccchhHHHHHHHHHHHHH
Q 018894           90 NLSLGFNSVGFYQMTKLAIIPCTILLE-TLFFRKKF-SRNIQLSLVILLVGVGIATVTD--LQLNVLGSVLSLLAVLTTC  165 (349)
Q Consensus        90 ~~al~~~~~s~~~~l~~~~pi~~~~l~-~~~~~e~~-s~~~~~~i~l~~~Gv~l~~~~~--~~~~~~G~~~~l~s~~~~a  165 (349)
                      ++-++-.+-+-.+++.+...+.+.++- ..++|+|+ -..-.+|++++++-++++..-.  .+.-+.|+++.+...+..-
T Consensus        41 ~iimsd~t~~a~~vl~sfAvvliiIIiIImlF~RrLLCPLGlLCiilimi~lLv~~L~tLtGQ~LF~Gi~~l~l~~lLaL  120 (381)
T PF05297_consen   41 FIIMSDLTQGALTVLYSFAVVLIIIIIIIMLFKRRLLCPLGLLCIILIMIVLLVSMLWTLTGQTLFVGIVILFLCCLLAL  120 (381)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence            344455555556666666665555543 34556665 5667778888777766654321  2334567666544433222


Q ss_pred             HHHHHHHHHHhhcCCCHHHHHHHhhHH
Q 018894          166 VAQIMTNTIQKKFKVSSTQLLYQSCPY  192 (349)
Q Consensus       166 ~~~v~~k~~~~~~~~~~~~~~~~~~~~  192 (349)
                      .-..+ -.+.++++.+-|++..+...+
T Consensus       121 ~vW~Y-m~lLr~~GAs~WtiLaFcLAF  146 (381)
T PF05297_consen  121 GVWFY-MWLLRELGASFWTILAFCLAF  146 (381)
T ss_dssp             ---------------------------
T ss_pred             HHHHH-HHHHHHhhhHHHHHHHHHHHH
Confidence            11112 226677777888777655433

LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=90.03  E-value=4  Score=37.26  Aligned_cols=144  Identities=10%  Similarity=0.044  Sum_probs=75.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHh-hhcccccccccccccCchhHHHHHHH
Q 018894          151 VLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPF-LDGLLTNKNVFAFKYTPYVLFFIVLS  229 (349)
Q Consensus       151 ~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (349)
                      ..|+++-.+++++.+.+.+=.||..+    -+++......-+-+-+.+|.... ..-| +-.+.. .+.+...++...+.
T Consensus         6 i~Gii~h~iGg~~~~sfy~P~kkvk~----WsWEs~Wlv~gi~swli~P~~~a~l~ip-~~~~i~-~~~~~~~l~~~~l~   79 (344)
T PF06379_consen    6 ILGIIFHAIGGFASGSFYVPFKKVKG----WSWESYWLVQGIFSWLIVPWLWALLAIP-DFFSIY-SATPASTLFWTFLF   79 (344)
T ss_pred             HHHHHHHHHHHHHhhhhccchhhcCC----ccHHHHHHHHHHHHHHHHHHHHHHHhCC-cHHHHH-HhCChhHHHHHHHH
Confidence            47999999999999999988777543    34444443322222222222211 1111 100111 12222333444444


Q ss_pred             HHHHHHHHHHHHHhhcccC-cchhhhhhhhhHHHHHHHHHHhcC-------CCCchhhhhhHHHHHHHHHHHhhhcccc
Q 018894          230 CLISVSVNFSTFLVIGKTS-PVTYQVLGHLKTCLVLAFGYVLLH-------DPFSWRNILGILIAVIGMVLYSYCCSLE  300 (349)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~-a~~~s~~~~~~~v~~~~~~~~~~~-------e~~t~~~~~G~~lii~g~~l~~~~~~~~  300 (349)
                      |++=.+-...+-..+++.+ +...++..-+..++..++--++.+       ++-....++|.+++++|+.+..+.-.++
T Consensus        80 G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~K  158 (344)
T PF06379_consen   80 GVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMK  158 (344)
T ss_pred             HHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhh
Confidence            4333222333334566644 344455555555555555444433       2334567889999999999987765443

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=89.72  E-value=0.19  Score=41.78  Aligned_cols=61  Identities=23%  Similarity=0.362  Sum_probs=55.0

Q ss_pred             HHHHHHhhcccCcchhhhhhhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhhc
Q 018894          237 NFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYCC  297 (349)
Q Consensus       237 ~~~~~~~~~~~~a~~~s~~~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~~  297 (349)
                      ++.+..++++.+|+.++.+......+..+++++++++++....++..++.+.|+....+..
T Consensus        67 NY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~D  127 (290)
T KOG4314|consen   67 NYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYAD  127 (290)
T ss_pred             CcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEecc
Confidence            6777788999999999999999999999999999999999999999999999987766543

>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine

Probab=88.64  E-value=0.55  Score=41.83  Aligned_cols=134  Identities=13%  Similarity=0.069  Sum_probs=64.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhhHHHHHHHHHHHHhhhcccc-----cc---cccccccCchhHHHHHHH
Q 018894          158 LLAVLTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIIGPFLDGLLT-----NK---NVFAFKYTPYVLFFIVLS  229 (349)
Q Consensus       158 l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~-----~~---~~~~~~~~~~~~~~~~~~  229 (349)
                      +++.+||+..-...|-.-++.+  -.+..+|-..++.+....+..+..+...     .+   ..... .++..+...+.+
T Consensus         2 ~itmlcwGSW~nt~kL~~r~gR--~~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q-~n~~sv~~A~aG   78 (336)
T PF07168_consen    2 VITMLCWGSWPNTQKLAERRGR--LPQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQ-ANWPSVLFAMAG   78 (336)
T ss_pred             eeehhhhcChHHHHHHHHhcCC--ccceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhc-CChHHHHHHHHh
Confidence            4567888887777666655322  2223444444444433333222222111     01   11112 233344455666


Q ss_pred             HHHHHHHHHHHHHhhcccCcchhhhhh-hhhHHHHHHHHHHhcCCCCc--hhhhhhHHHHHHHHHHHhh
Q 018894          230 CLISVSVNFSTFLVIGKTSPVTYQVLG-HLKTCLVLAFGYVLLHDPFS--WRNILGILIAVIGMVLYSY  295 (349)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~a~~~s~~~-~~~~v~~~~~~~~~~~e~~t--~~~~~G~~lii~g~~l~~~  295 (349)
                      |++-.+.|....+++...+-..+-.+. .+.-++++.+.++ .+.+.+  ..-+.|.+++++++++-..
T Consensus        79 GvvfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYf-ld~~~n~a~iLF~GV~cf~iAI~lga~  146 (336)
T PF07168_consen   79 GVVFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYF-LDPKINRAEILFPGVACFLIAIILGAA  146 (336)
T ss_pred             hHhhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeee-ccCCCCCceEEEccHHHHHHHHHHHHH
Confidence            666656666666666555433322221 1233344444543 344544  2445588888888877543

Transport is dependent on glucose and a proton gradient [].

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=84.87  E-value=8.3  Score=33.00  Aligned_cols=126  Identities=13%  Similarity=0.034  Sum_probs=80.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHH-ccccccC-------CCCchhHHHHHHHHHHHH
Q 018894           15 LSLSVISSVSIVICNKALISSLGFTFATTLTSWHLLVTFCSLHVALW-MKLFEHK-------PFDPRAVMGFGVLNGISI   86 (349)
Q Consensus        15 ~~~~~~~~~~~~~~~K~v~~~~~~~~p~~~~~~r~~~~~l~l~~~~~-~~~~~~~-------~~~~~~~~~~~~~~~~~~   86 (349)
                      +..-+..+...++..|..+.--.+. .+-..++.=.++..++..+.. ...+...       ......+++-|++...-.
T Consensus       160 m~~NclssaafVL~mrkri~ltNf~-d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiS  238 (309)
T COG5070         160 MFTNCLSSAAFVLIMRKRIKLTNFK-DFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGIS  238 (309)
T ss_pred             EehhhHhHHHHHHHHHHhhcccccc-hhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhh
Confidence            3344555666666666665421222 333444555555554443322 1211111       111235555677777778


Q ss_pred             hhcceeccccchhHHHHHhhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhhee
Q 018894           87 GLLNLSLGFNSVGFYQMTKLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGI  141 (349)
Q Consensus        87 ~~~~~al~~~~~s~~~~l~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l  141 (349)
                      ++.-|.+.-++...+.++..++-...++.+.++++++.+...+.+++++....++
T Consensus       239 y~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~i  293 (309)
T COG5070         239 YCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAI  293 (309)
T ss_pred             hccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHH
Confidence            8999999999999999999999999999999999999998888887776654443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	349
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 3e-04
 Identities = 41/268 (15%), Positives = 73/268 (27%), Gaps = 74/268 (27%)

Query: 68  KPFDPRAVMGFGVLNGISIGLLNLSLGFNSVGFYQM-----TKLAIIPCTILLETLFFRK 122
           + F    V        +   LL L    N V    +     T +A+  C     +   + 
Sbjct: 124 QVFAKYNVSRLQPYLKLRQALLELRPAKN-VLIDGVLGSGKTWVALDVC----LSYKVQC 178

Query: 123 KFSRNIQLSLVILLVGVGIATVTDLQLNVLGSVLSLLAVLTTCVAQIMTNTIQKKFKVSS 182
           K    I        + +      +          ++L +L   + QI  N   +    S+
Sbjct: 179 KMDFKI------FWLNLKNCNSPE----------TVLEMLQKLLYQIDPNWTSRSDHSSN 222

Query: 183 TQLLYQSCPYQALTLFIIGPFLDGLLT-----NKNVF-AFKYTPYVLFFIVLSCLISVSV 236
            +L   S   +   L    P+ + LL      N   + AF           LSC I    
Sbjct: 223 IKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFN----------LSCKI---- 268

Query: 237 NFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYC 296
                L+  +   VT  +     T + L           +   +  +L+  +        
Sbjct: 269 -----LLTTRFKQVTDFLSAATTTHISL----DHHSMTLTPDEVKSLLLKYLDC------ 313

Query: 297 CSLESQQKASETSSQLPQVVKEGETDPL 324
                          LP+ V     +P 
Sbjct: 314 -----------RPQDLPREVLTT--NPR 328

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	349
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.67
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.42
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.33
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.18

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.67  E-value=3.4e-08  Score=77.11  Aligned_cols=62  Identities=6%  Similarity=0.164  Sum_probs=45.3

Q ss_pred             HHHHHHHHhhcccCcchhhhh-hhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhh
Q 018894          235 SVNFSTFLVIGKTSPVTYQVL-GHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYC  296 (349)
Q Consensus       235 ~~~~~~~~~~~~~~a~~~s~~-~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~  296 (349)
                      +.++.+..++++.++..+..+ ..+.|+++.++++++|+|++++.+++|++++++|+++.+..
T Consensus        42 ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           42 ASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (137)
T ss_dssp             HHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            346677788999999988777 89999999999999999999999999999999999998754

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.42  E-value=9.6e-07  Score=66.41  Aligned_cols=68  Identities=19%  Similarity=0.161  Sum_probs=61.4

Q ss_pred             HHHHHHHHHhhcceeccccchhHHHHH-hhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeeec
Q 018894           78 FGVLNGISIGLLNLSLGFNSVGFYQMT-KLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATVT  145 (349)
Q Consensus        78 ~~~~~~~~~~~~~~al~~~~~s~~~~l-~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~~  145 (349)
                      ..+++++..++...++++.|.+.+..+ .++.|+++++++++++||+++..+++|+.+++.|+++....
T Consensus        36 ~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            345677788888999999999999888 89999999999999999999999999999999999987653

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.33  E-value=6.8e-07  Score=69.68  Aligned_cols=68  Identities=21%  Similarity=0.200  Sum_probs=50.9

Q ss_pred             HHHHHHHHHHhhcceeccccchhHHHHH-hhhHHHHHHHHHHHHhccccchhhhHHHHHhhhhheeeee
Q 018894           77 GFGVLNGISIGLLNLSLGFNSVGFYQMT-KLAIIPCTILLETLFFRKKFSRNIQLSLVILLVGVGIATV  144 (349)
Q Consensus        77 ~~~~~~~~~~~~~~~al~~~~~s~~~~l-~~~~pi~~~~l~~~~~~e~~s~~~~~~i~l~~~Gv~l~~~  144 (349)
                      ...+++++..++.+.+++++|++.+..+ .++.|++++++++++++|+++..+++|++++++|+++...
T Consensus        35 l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~  103 (137)
T 2i68_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINL  103 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            3345677888999999999999998888 8999999999999999999999999999999999998764

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.18  E-value=8.5e-06  Score=61.15  Aligned_cols=62  Identities=6%  Similarity=0.164  Sum_probs=54.3

Q ss_pred             HHHHHHHHhhcccCcchhhhh-hhhhHHHHHHHHHHhcCCCCchhhhhhHHHHHHHHHHHhhh
Q 018894          235 SVNFSTFLVIGKTSPVTYQVL-GHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVLYSYC  296 (349)
Q Consensus       235 ~~~~~~~~~~~~~~a~~~s~~-~~~~~v~~~~~~~~~~~e~~t~~~~~G~~lii~g~~l~~~~  296 (349)
                      ..++....++|+.+...+..+ ..+.|+.+.+.++++++|++|+.+++|+++++.|+++.+..
T Consensus        42 ~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           42 ASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            345566678899888888666 89999999999999999999999999999999999998754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00