Citrus Sinensis ID: 018902
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
No hits with e-value below 0.001 by BLAST
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 349 | ||||||
| 224088242 | 351 | predicted protein [Populus trichocarpa] | 0.982 | 0.977 | 0.746 | 1e-150 | |
| 255565043 | 296 | conserved hypothetical protein [Ricinus | 0.845 | 0.996 | 0.726 | 1e-130 | |
| 363814579 | 315 | uncharacterized protein LOC100797661 [Gl | 0.896 | 0.993 | 0.700 | 1e-128 | |
| 449443015 | 352 | PREDICTED: uncharacterized protein LOC10 | 0.985 | 0.977 | 0.629 | 1e-118 | |
| 449443013 | 362 | PREDICTED: uncharacterized protein LOC10 | 0.985 | 0.950 | 0.611 | 1e-116 | |
| 357125035 | 366 | PREDICTED: uncharacterized protein LOC10 | 0.899 | 0.857 | 0.592 | 1e-108 | |
| 115466770 | 325 | Os06g0182400 [Oryza sativa Japonica Grou | 0.882 | 0.947 | 0.621 | 1e-107 | |
| 334188478 | 309 | metallophosphatase domain-containing pro | 0.859 | 0.970 | 0.620 | 1e-106 | |
| 212720813 | 363 | uncharacterized protein LOC100193128 [Ze | 0.896 | 0.862 | 0.584 | 1e-105 | |
| 222635080 | 878 | hypothetical protein OsJ_20356 [Oryza sa | 0.856 | 0.340 | 0.62 | 1e-103 |
| >gi|224088242|ref|XP_002308386.1| predicted protein [Populus trichocarpa] gi|222854362|gb|EEE91909.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 535 bits (1379), Expect = e-150, Method: Compositional matrix adjust.
Identities = 259/347 (74%), Positives = 298/347 (85%), Gaps = 4/347 (1%)
Query: 2 LSALSHAQALSFFSHSFLCLST-SPKTARSAPAMSASVVRIVIVGDVHDDWDLQEDSKAL 60
LSAL HA A F S + S+ P T RS+ +M+AS RI +VGDVHDDW+L+EDSKAL
Sbjct: 4 LSALIHAPAPCFISTTQRSTSSPDPTTVRSS-SMAASA-RIAVVGDVHDDWNLEEDSKAL 61
Query: 61 QLLKPDLVLFTGDFGNENVEIVQSVAELEFPKAVILGNHDSWKTQEFSGKKKDGVQLQLE 120
QLL+PDLVLFTGDFGNENVE+VQS+A+L PK VILGNHDSWKTQ FSGK+KDGVQ QLE
Sbjct: 62 QLLQPDLVLFTGDFGNENVELVQSIADLNLPKVVILGNHDSWKTQHFSGKRKDGVQRQLE 121
Query: 121 CLGEEHVAYRRLDFPTLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMDESAKRIYKVA 180
CLGEEHVAY+RLDFPTLKLS+VGGRPFSCGG+QIFR+ LLS RYGVQDMD SA RIY A
Sbjct: 122 CLGEEHVAYKRLDFPTLKLSVVGGRPFSCGGEQIFRRSLLSARYGVQDMDGSADRIYNAA 181
Query: 181 LGTPDDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIP 240
LGTP+DH+VI LAHNGP+GLGS NDICGKDW FGGGDHGDPDLAQAIS LKETTK+ IP
Sbjct: 182 LGTPEDHMVIFLAHNGPTGLGSNLNDICGKDWVFGGGDHGDPDLAQAISHLKETTKISIP 241
Query: 241 LVVFGHMHKELAYGNGLRKMIVVGADSTIYLNGAIVPRVKRLIDEQGADSSS-VSNKTSF 299
LVVFGHMHKELAYGNGLRKMIVVGAD TIYLNGAIVPRV+RL+ EQG D+++ ++N+TS
Sbjct: 242 LVVFGHMHKELAYGNGLRKMIVVGADKTIYLNGAIVPRVRRLVAEQGTDNTNFMNNETSV 301
Query: 300 LRPDSKGTVRAFTVVEILDGRIDKIAERWIIVVGDTTTLQEEHILFK 346
P S+GT+RAFT+VEIL+GR+DKIAE W+ V+ D T + EEH+LF+
Sbjct: 302 FSPGSRGTMRAFTLVEILEGRVDKIAETWVSVIEDETAIGEEHVLFQ 348
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255565043|ref|XP_002523514.1| conserved hypothetical protein [Ricinus communis] gi|223537221|gb|EEF38853.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 228/314 (72%), Positives = 257/314 (81%), Gaps = 19/314 (6%)
Query: 36 ASVVRIVIVGDVHDDWDLQEDSKALQLLKPDLVLFTGDFGNENVEIVQSVAELEFPKAVI 95
A+ RI IVGDVHDDW+L+ED+KALQ L+PDLVLFTGDFG+EN E+VQSVA+++FPKAVI
Sbjct: 2 AASARIAIVGDVHDDWNLEEDTKALQYLQPDLVLFTGDFGDENAELVQSVADVKFPKAVI 61
Query: 96 LGNHDSWKTQEFSGKKKDGVQLQLECLGEEHVAYRRLDFPTLKLSIVGGRPFSCGGQQIF 155
LGNHDSW T EFS K+KD VQLQLECLGEEHV YRRLDFPTLKLS+VGGRPFSCGG+Q+F
Sbjct: 62 LGNHDSWHTHEFSKKEKDAVQLQLECLGEEHVGYRRLDFPTLKLSVVGGRPFSCGGKQLF 121
Query: 156 RKRLLSVRYGVQDMDESAKRIYKVALGTPDDHLVILLAHNGPSGLGSEPNDICGKDWGFG 215
RK+LLS RY VQDMD SA RIY ALGTP+DHL I L HNGP+GLGS +DICGKDW G
Sbjct: 122 RKKLLSARYRVQDMDGSAMRIYHTALGTPEDHLAIFLGHNGPTGLGSNIDDICGKDWVSG 181
Query: 216 GGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKELAYGNGLRKMIVVGADSTIYLNGAI 275
GGDHGDPDLAQAI+ LKET K+ +PLVVFGHMHKELAYGNGLRKMIVVGAD TIYLNGAI
Sbjct: 182 GGDHGDPDLAQAIAHLKETAKVNVPLVVFGHMHKELAYGNGLRKMIVVGADKTIYLNGAI 241
Query: 276 VPRVKRLIDEQGADSSSVSNKTSFLRPDSKGTVRAFTVVEILDGRIDKIAERWIIVVGDT 335
VPRV R+ EQ GT RAFT+VEIL GR+DKIAE W+ V GD
Sbjct: 242 VPRVTRIDGEQ-------------------GTRRAFTLVEILQGRVDKIAEAWVSVAGDA 282
Query: 336 TTLQEEHILFKYSS 349
T+++EE ILFK S+
Sbjct: 283 TSVEEELILFKSSN 296
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|363814579|ref|NP_001242765.1| uncharacterized protein LOC100797661 [Glycine max] gi|255638957|gb|ACU19780.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust.
Identities = 222/317 (70%), Positives = 269/317 (84%), Gaps = 4/317 (1%)
Query: 34 MSASVVRIVIVGDVHDDWDLQEDSKALQLLKPDLVLFTGDFGNENVEIVQSVAELEFPKA 93
M+ S +RI +VGDVHD W+L++DSKAL+LL+PDLVLFTGDFG EN+E+++SV LEF KA
Sbjct: 1 MAVSSIRIAVVGDVHDCWNLEQDSKALELLQPDLVLFTGDFGEENLEVIKSVVNLEFAKA 60
Query: 94 VILGNHDSWKTQEFSG-KKKDGVQLQLECLGEEHVAYRRLDFPTLKLSIVGGRPFSCGGQ 152
VILGNHD+W T++FSG K+KD VQLQLECLG+EHVAY+R DFP +K+S+VGGRPFS GG+
Sbjct: 61 VILGNHDAWFTKQFSGSKEKDKVQLQLECLGKEHVAYQRSDFPQIKVSVVGGRPFSIGGK 120
Query: 153 QIFRKRLLSVRYGVQDMDESAKRIYKVALGTPDDHLVILLAHNGPSGLGSEPNDICGKDW 212
+FRK+LL RYGV+DMDESAKRI K ALGTP+DH +ILLAHNGP+GLGS+ NDICGKDW
Sbjct: 121 PMFRKKLLLARYGVKDMDESAKRIQKAALGTPEDHFLILLAHNGPTGLGSDSNDICGKDW 180
Query: 213 GF-GGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKELAYGNGLRKMIVVGADSTIYL 271
F G GDHGDPDLAQAISLLKE ++ IPLVVFGHMHKELAYGNG RKMIVVGAD+TIYL
Sbjct: 181 EFEGDGDHGDPDLAQAISLLKENNQISIPLVVFGHMHKELAYGNGFRKMIVVGADNTIYL 240
Query: 272 NGAIVPRVKRLIDEQGADSSSVSNKTSFLRPDSKGTVRAFTVVEILDGRIDKIAERWIIV 331
NGAIVPRVKRL ++ D S+ ++++ P++KGT RAFT+VEI +G + KIAE W+ V
Sbjct: 241 NGAIVPRVKRLGGDE--DKKSLDDESALASPEAKGTRRAFTLVEISEGGVAKIAESWVSV 298
Query: 332 VGDTTTLQEEHILFKYS 348
D TTL+EEHILF+ S
Sbjct: 299 AEDRTTLEEEHILFESS 315
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449443015|ref|XP_004139276.1| PREDICTED: uncharacterized protein LOC101212549 isoform 2 [Cucumis sativus] gi|449493655|ref|XP_004159396.1| PREDICTED: uncharacterized protein LOC101226140 isoform 2 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/348 (62%), Positives = 264/348 (75%), Gaps = 4/348 (1%)
Query: 1 MLSALSHAQALSFFSHSFLCLSTSPKTARSAPAMSASVVRIVIVGDVHDDWDLQEDSKAL 60
ML AL HA + F S +F S P ++ A RI ++GDVH WDLQEDSKAL
Sbjct: 1 MLGALGHAPFIYFLS-AFPPPSAVPNPNILRFSLMAISARIAVIGDVHGYWDLQEDSKAL 59
Query: 61 QLLKPDLVLFTGDFGNENVEIVQSVAELEFPKAVILGNHDSWKTQEFSGKKKDGVQLQLE 120
LL+PDLVLFTGDFG ENVE+V+S+A+L+F KA ILGNHD+W T FS +KKDGVQLQLE
Sbjct: 60 HLLQPDLVLFTGDFGEENVELVRSIADLKFAKAAILGNHDAWFTPCFSQEKKDGVQLQLE 119
Query: 121 CLGEEHVAYRRLDFPTLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMDESAKRIYKVA 180
CLGE H+ YRR+DFP KLSIVGGRPFS GG+ +FRK+LLS RYGV+DM SAKRIY+ A
Sbjct: 120 CLGENHIGYRRMDFPQQKLSIVGGRPFSHGGKAMFRKQLLSARYGVKDMKTSAKRIYEAA 179
Query: 181 LGTPDDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCI- 239
+G P+DHLVI+LAHNGP+GLGS +DICGKDW +G GD+GD DL QAIS LKE K +
Sbjct: 180 IGAPEDHLVIILAHNGPTGLGSRADDICGKDWDYGDGDYGDEDLEQAISKLKENGKFHVP 239
Query: 240 PLVVFGHMHKELAYGNGLRKMIVVGADSTIYLNGAIVPRVKRLIDEQG-ADSSSVSNKTS 298
PLVVFGHMHKELAYG G RKMIVV AD+TIYLNGA+VPRV E+G + S+ TS
Sbjct: 240 PLVVFGHMHKELAYG-GHRKMIVVTADNTIYLNGAVVPRVNSYYGEEGKVRGNFTSSGTS 298
Query: 299 FLRPDSKGTVRAFTVVEILDGRIDKIAERWIIVVGDTTTLQEEHILFK 346
+ S+GT RAFTVV+I DG++DKI E WI V+GD T+L E H++++
Sbjct: 299 CSQSVSRGTKRAFTVVDISDGKVDKITESWISVLGDETSLDEAHLMYQ 346
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449443013|ref|XP_004139275.1| PREDICTED: uncharacterized protein LOC101212549 isoform 1 [Cucumis sativus] gi|449493653|ref|XP_004159395.1| PREDICTED: uncharacterized protein LOC101226140 isoform 1 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/358 (61%), Positives = 264/358 (73%), Gaps = 14/358 (3%)
Query: 1 MLSALSHAQALSFFSHSFLCLSTSPKTARSAPAMSASVVRIVIVGDVHDDWDLQEDSKAL 60
ML AL HA + F S +F S P ++ A RI ++GDVH WDLQEDSKAL
Sbjct: 1 MLGALGHAPFIYFLS-AFPPPSAVPNPNILRFSLMAISARIAVIGDVHGYWDLQEDSKAL 59
Query: 61 QLLKPDLVLFTGDFGNENVEIVQSVAELEFPKAVILGNHDSWKTQEFSGK---------- 110
LL+PDLVLFTGDFG ENVE+V+S+A+L+F KA ILGNHD+W T FS +
Sbjct: 60 HLLQPDLVLFTGDFGEENVELVRSIADLKFAKAAILGNHDAWFTPCFSQECVFMGQELQM 119
Query: 111 KKDGVQLQLECLGEEHVAYRRLDFPTLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMD 170
KKDGVQLQLECLGE H+ YRR+DFP KLSIVGGRPFS GG+ +FRK+LLS RYGV+DM
Sbjct: 120 KKDGVQLQLECLGENHIGYRRMDFPQQKLSIVGGRPFSHGGKAMFRKQLLSARYGVKDMK 179
Query: 171 ESAKRIYKVALGTPDDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISL 230
SAKRIY+ A+G P+DHLVI+LAHNGP+GLGS +DICGKDW +G GD+GD DL QAIS
Sbjct: 180 TSAKRIYEAAIGAPEDHLVIILAHNGPTGLGSRADDICGKDWDYGDGDYGDEDLEQAISK 239
Query: 231 LKETTKLCI-PLVVFGHMHKELAYGNGLRKMIVVGADSTIYLNGAIVPRVKRLIDEQG-A 288
LKE K + PLVVFGHMHKELAYG G RKMIVV AD+TIYLNGA+VPRV E+G
Sbjct: 240 LKENGKFHVPPLVVFGHMHKELAYG-GHRKMIVVTADNTIYLNGAVVPRVNSYYGEEGKV 298
Query: 289 DSSSVSNKTSFLRPDSKGTVRAFTVVEILDGRIDKIAERWIIVVGDTTTLQEEHILFK 346
+ S+ TS + S+GT RAFTVV+I DG++DKI E WI V+GD T+L E H++++
Sbjct: 299 RGNFTSSGTSCSQSVSRGTKRAFTVVDISDGKVDKITESWISVLGDETSLDEAHLMYQ 356
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357125035|ref|XP_003564201.1| PREDICTED: uncharacterized protein LOC100828474 [Brachypodium distachyon] | Back alignment and taxonomy information |
|---|
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/319 (59%), Positives = 242/319 (75%), Gaps = 5/319 (1%)
Query: 28 ARSAPAMSASVVRIVIVGDVHDDWDLQEDSKALQLLKPDLVLFTGDFGNENVEIVQSVAE 87
A ++ A VR+ +VGDVH+DW+L ED+KAL +L+PDLVLFTGD+GNENV++V+S+++
Sbjct: 47 ASTSAGAGAGRVRVAVVGDVHNDWNLDEDTKALHVLQPDLVLFTGDYGNENVQLVKSISD 106
Query: 88 LEFPKAVILGNHDSWKTQEFSGKKKDGVQLQLECLGEEHVAYRRLDFPTLKLSIVGGRPF 147
L+FPKA ILGNHD W+T +FS KK D VQLQLE LGE+HV Y LDFPT+KLS+VGGRPF
Sbjct: 107 LQFPKAAILGNHDCWRTHQFSEKKVDRVQLQLESLGEQHVGYNCLDFPTIKLSVVGGRPF 166
Query: 148 SCGGQQIFRKRLLSVRYGVQDMDESAKRIYKVALGTPDDHLVILLAHNGPSGLGSEPNDI 207
SCGG ++FR +LLS RYGV +M SA++IY A G P++H VILLAHNGP+GLGS DI
Sbjct: 167 SCGGDRLFRPKLLSKRYGVDNMAGSARKIYDAASGAPEEHSVILLAHNGPTGLGSRMADI 226
Query: 208 CGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKELAYGNGLRKMIVVGADS 267
CG+DW GGGDHGDPDL QAIS L+ T + IPLVVFGHMHK LAYG GLRKMI GA+
Sbjct: 227 CGRDWVAGGGDHGDPDLEQAISDLQRQTGVSIPLVVFGHMHKSLAYGGGLRKMIAFGANK 286
Query: 268 TIYLNGAIVPRVKRLIDEQGADSSSVSNKTSFLRPDSKGTVRAFTVVEILDGRIDKIAER 327
TIYLNGAIVPR+K + + S + P T RAFT++++ DG ++KI+E
Sbjct: 287 TIYLNGAIVPRMKHAAAISTRERDGLQGLGS-MAP----TSRAFTIIDLFDGAVEKISEV 341
Query: 328 WIIVVGDTTTLQEEHILFK 346
W++V G + L+EE +L++
Sbjct: 342 WVLVSGVGSELEEETVLYR 360
|
Source: Brachypodium distachyon Species: Brachypodium distachyon Genus: Brachypodium Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|115466770|ref|NP_001056984.1| Os06g0182400 [Oryza sativa Japonica Group] gi|55771368|dbj|BAD72535.1| Diadenosine tetraphosphatase and related serine/threonine protein phosphatases-like [Oryza sativa Japonica Group] gi|113595024|dbj|BAF18898.1| Os06g0182400 [Oryza sativa Japonica Group] gi|215697068|dbj|BAG91062.1| unnamed protein product [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/309 (62%), Positives = 232/309 (75%), Gaps = 1/309 (0%)
Query: 39 VRIVIVGDVHDDWDLQEDSKALQLLKPDLVLFTGDFGNENVEIVQSVAELEFPKAVILGN 98
VR+ +VGDVH+DW L+EDSKAL L+PDLVLFTGD+GNENV++V+S+++L+ PKA ILGN
Sbjct: 11 VRVAVVGDVHNDWTLEEDSKALHFLQPDLVLFTGDYGNENVQLVKSISDLQLPKAAILGN 70
Query: 99 HDSWKTQEFSGKKKDGVQLQLECLGEEHVAYRRLDFPTLKLSIVGGRPFSCGGQQIFRKR 158
HD W T +FS KK D VQLQLE LGE+HV Y+ LDFPT+KLS+VGGRPFSCGG +IFR +
Sbjct: 71 HDCWHTYQFSEKKVDRVQLQLESLGEQHVGYKCLDFPTIKLSVVGGRPFSCGGNRIFRPK 130
Query: 159 LLSVRYGVQDMDESAKRIYKVALGTPDDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGD 218
LLS YGV DM ESAKRIY A P +H VILLAHNGP+GLGS DICG+DW GGGD
Sbjct: 131 LLSKWYGVNDMAESAKRIYDAATNAPKEHAVILLAHNGPTGLGSRMEDICGRDWVAGGGD 190
Query: 219 HGDPDLAQAISLLKETTKLCIPLVVFGHMHKELAYGNGLRKMIVVGADSTIYLNGAIVPR 278
HGDPDL QAIS L+ T + IPLVVFGHMHK LAYG GLRKMI GA+ TIYLNGA+VPR
Sbjct: 191 HGDPDLEQAISDLQRETGVSIPLVVFGHMHKSLAYGRGLRKMIAFGANRTIYLNGAVVPR 250
Query: 279 VKRL-IDEQGADSSSVSNKTSFLRPDSKGTVRAFTVVEILDGRIDKIAERWIIVVGDTTT 337
V Q A S+S L T RAFT+V++ +G ++KI+E W+ V T
Sbjct: 251 VNHAQSSRQPAISTSEKTGLEGLTGLMVPTSRAFTIVDLFEGAVEKISEVWVTVGDARTE 310
Query: 338 LQEEHILFK 346
L++E +L+K
Sbjct: 311 LEQELVLYK 319
|
Source: Oryza sativa Japonica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|334188478|ref|NP_001190565.1| metallophosphatase domain-containing protein [Arabidopsis thaliana] gi|332009630|gb|AED97013.1| metallophosphatase domain-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/316 (62%), Positives = 238/316 (75%), Gaps = 16/316 (5%)
Query: 35 SASVVRIVIVGDVHDDWDLQEDSKALQLLKPDLVLFTGDFGNENVEIVQSVAELEFPKAV 94
S+S+VRI +VGD+H W+L ED KAL++L+PDLVLFTGDFG ENV +VQSVA L FPKAV
Sbjct: 3 SSSLVRIAVVGDIHGFWNLDEDRKALRVLQPDLVLFTGDFGEENVPLVQSVAALTFPKAV 62
Query: 95 ILGNHDSWKTQEFSGK---KKDGVQLQLECLGEEHVAYRRLDFPTLKLSIVGGRPFSCGG 151
ILGNHD+W TQ+F K K++GVQ+QL+ LG+EH+ Y+R+DFP+ KLSIVGGRPFS GG
Sbjct: 63 ILGNHDAWFTQDFPRKEKQKQNGVQMQLDILGDEHIGYQRMDFPSFKLSIVGGRPFSHGG 122
Query: 152 QQIFRKRLLSVRYGVQDMDESAKRIYKVALGTPDDHLVILLAHNGPSGLGSEPNDICGKD 211
++FRK LL RYGV DM+ SA I + A GTP+DH+ I+LAHNGP+GLG + DICGKD
Sbjct: 123 DRLFRKNLLVQRYGVHDMEASAGSICRAAHGTPEDHVAIILAHNGPTGLGWQAEDICGKD 182
Query: 212 WGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKELAYGNGLRKMIVVGADS-TIY 270
WG GGDHGDPDL QAI LKETTKL IPLVVFGHMHKEL G G RKM+V +D+ T+Y
Sbjct: 183 WGAEGGDHGDPDLEQAIRQLKETTKLSIPLVVFGHMHKELQRGKGNRKMVVQDSDNQTVY 242
Query: 271 LNGAIVPRVKRLIDEQGADSSSVSNKTSFLRPDSKGTVRAFTVVEILDGRIDKIAERWII 330
+NGAIVPRVK A+S +S GT RAFT+VEILDG+I KIAE W+
Sbjct: 243 VNGAIVPRVKEAKKRGAAES------------ESGGTTRAFTLVEILDGKIKKIAEIWVH 290
Query: 331 VVGDTTTLQEEHILFK 346
V G + EE+ LF+
Sbjct: 291 VNGSMAKIVEENTLFE 306
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|212720813|ref|NP_001131760.1| uncharacterized protein LOC100193128 [Zea mays] gi|194692458|gb|ACF80313.1| unknown [Zea mays] gi|413952916|gb|AFW85565.1| hypothetical protein ZEAMMB73_402030 [Zea mays] | Back alignment and taxonomy information |
|---|
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/318 (58%), Positives = 236/318 (74%), Gaps = 5/318 (1%)
Query: 30 SAPAMSASVVRIVIVGDVHDDWDLQEDSKALQLLKPDLVLFTGDFGNENVEIVQSVAELE 89
SA VRI +VGDVH+DW L+EDSKAL+ L+PDLVLFTGD+GNENVE+V+S+++L+
Sbjct: 45 SAAGAGRHRVRIAVVGDVHNDWALEEDSKALRFLQPDLVLFTGDYGNENVELVRSISDLQ 104
Query: 90 FPKAVILGNHDSWKTQEFSGKKKDGVQLQLECLGEEHVAYRRLDFPTLKLSIVGGRPFSC 149
PKA ILGNHD W T +FS KK D V+LQL LGE+HV Y+ LDFP++KLS+VGGRPFSC
Sbjct: 105 LPKAAILGNHDCWHTHQFSEKKVDRVRLQLASLGEQHVGYKCLDFPSIKLSVVGGRPFSC 164
Query: 150 GGQQIFRKRLLSVRYGVQDMDESAKRIYKVALGTPDDHLVILLAHNGPSGLGSEPNDICG 209
GG ++ R RLLS YGV DM SAK+IY A G P+ H V+LLAHNGP+GLGS +DICG
Sbjct: 165 GGDRLLRPRLLSKCYGVNDMAGSAKKIYDAAAGAPEGHSVVLLAHNGPTGLGSRMDDICG 224
Query: 210 KDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKELAYGNGLRKMIVVGADSTI 269
+DW GGGDHGDPDL +AIS L+ ++ IPLVVFGHMHK LAYG GLRKMI GA+ I
Sbjct: 225 RDWVPGGGDHGDPDLERAISDLQREARVSIPLVVFGHMHKSLAYGRGLRKMIAFGANHII 284
Query: 270 YLNGAIVPRVKRLIDEQGADSSSVSNKTSFLRPDSKGTVRAFTVVEILDGRIDKIAERWI 329
YLNGA+VPRVK G + + S T+RAFT+ ++ +GR++KI+E W+
Sbjct: 285 YLNGAVVPRVKFAQTTPGHEQNQPEGSGS-----RAPTLRAFTIADLYEGRVEKISEVWV 339
Query: 330 IVVGDTTTLQEEHILFKY 347
+V G T ++EE +L+K+
Sbjct: 340 LVSGARTEVEEEIVLYKH 357
|
Source: Zea mays Species: Zea mays Genus: Zea Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|222635080|gb|EEE65212.1| hypothetical protein OsJ_20356 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/300 (62%), Positives = 224/300 (74%), Gaps = 1/300 (0%)
Query: 48 HDDWDLQEDSKALQLLKPDLVLFTGDFGNENVEIVQSVAELEFPKAVILGNHDSWKTQEF 107
H+DW L+EDSKAL L+PDLVLFTGD+GNENV++V+S+++L+ PKA ILGNHD W T +F
Sbjct: 17 HNDWTLEEDSKALHFLQPDLVLFTGDYGNENVQLVKSISDLQLPKAAILGNHDCWHTYQF 76
Query: 108 SGKKKDGVQLQLECLGEEHVAYRRLDFPTLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQ 167
S KK D VQLQLE LGE+HV Y+ LDFPT+KLS+VGGRPFSCGG +IFR +LLS YGV
Sbjct: 77 SEKKVDRVQLQLESLGEQHVGYKCLDFPTIKLSVVGGRPFSCGGNRIFRPKLLSKWYGVN 136
Query: 168 DMDESAKRIYKVALGTPDDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQA 227
DM ESAKRIY A P +H VILLAHNGP+GLGS DICG+DW GGGDHGDPDL QA
Sbjct: 137 DMAESAKRIYDAATNAPKEHAVILLAHNGPTGLGSRMEDICGRDWVAGGGDHGDPDLEQA 196
Query: 228 ISLLKETTKLCIPLVVFGHMHKELAYGNGLRKMIVVGADSTIYLNGAIVPRVKRL-IDEQ 286
IS L+ T + IPLVVFGHMHK LAYG GLRKMI GA+ TIYLNGA+VPRV Q
Sbjct: 197 ISDLQRETGVSIPLVVFGHMHKSLAYGRGLRKMIAFGANRTIYLNGAVVPRVNHAQSSRQ 256
Query: 287 GADSSSVSNKTSFLRPDSKGTVRAFTVVEILDGRIDKIAERWIIVVGDTTTLQEEHILFK 346
A S+S L T RAFT+V++ +G ++KI+E W+ V T L++E +L+K
Sbjct: 257 PAISTSEKTGLEGLTGLMVPTSRAFTIVDLFEGAVEKISEVWVTVGDARTELEQELVLYK 316
|
Source: Oryza sativa Japonica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
No hits with e-value below 0.001 by BLAST
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
 |
 |
 |
 |
 |
 |
 |
 |
||
 | grail3.0030014801 | hypothetical protein (351 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | eugene3.00041064 | hypothetical protein (230 aa) | • | 0.505 | |||||||
 | fgenesh4_pg.C_LG_III001848 | hypothetical protein (302 aa) | • | 0.504 | |||||||
 | grail3.0136004901 | hypothetical protein (160 aa) | • | 0.502 | |||||||
 | estExt_fgenesh4_pg.C_LG_V0039 | hypothetical protein (230 aa) | • | 0.502 | |||||||
 | estExt_fgenesh4_pg.C_LG_I0883 | hypothetical protein (277 aa) | • | 0.500 | |||||||
 | eugene3.00170453 | hypothetical protein (457 aa) | • | 0.498 | |||||||
 | gw1.131.237.1 | annotation not avaliable (372 aa) | • | 0.496 | |||||||
 | estExt_fgenesh4_pm.C_LG_XIII0026 | SubName- Full=Putative uncharacterized protein; (380 aa) | • | 0.493 | |||||||
 | eugene3.00120287 | hypothetical protein (135 aa) | • | 0.492 | |||||||
 | estExt_fgenesh4_pg.C_870038 | SubName- Full=Putative uncharacterized protein; (210 aa) | • | 0.490 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 349 | |||
| cd07397 | 238 | cd07397, MPP_DevT, Myxococcus xanthus DevT and rel | 1e-124 | |
| TIGR04168 | 269 | TIGR04168, TIGR04168, TIGR04168 family protein | 1e-100 | |
| cd07385 | 223 | cd07385, MPP_YkuE_C, Bacillus subtilis YkuE and re | 2e-11 | |
| pfam00149 | 185 | pfam00149, Metallophos, Calcineurin-like phosphoes | 6e-11 | |
| cd07383 | 199 | cd07383, MPP_Dcr2, Saccharomyces cerevisiae DCR2 p | 2e-07 | |
| cd00838 | 131 | cd00838, MPP_superfamily, metallophosphatase super | 1e-05 | |
| cd00144 | 225 | cd00144, MPP_PPP_family, phosphoprotein phosphatas | 0.001 | |
| pfam12850 | 146 | pfam12850, Metallophos_2, Calcineurin-like phospho | 0.001 | |
| COG1408 | 284 | COG1408, COG1408, Predicted phosphohydrolases [Gen | 0.002 |
| >gnl|CDD|163640 cd07397, MPP_DevT, Myxococcus xanthus DevT and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 356 bits (916), Expect = e-124
Identities = 140/242 (57%), Positives = 169/242 (69%), Gaps = 4/242 (1%)
Query: 39 VRIVIVGDVHDDWDLQEDSKALQLLKPDLVLFTGDFGNENVEIVQSVAELEFPKAVILGN 98
+RI IVGDVH WDL ED KAL LL+PDLVLF GDFGNE+V++V++++ L PKAVILGN
Sbjct: 1 LRIAIVGDVHGQWDL-EDIKALHLLQPDLVLFVGDFGNESVQLVRAISSLPLPKAVILGN 59
Query: 99 HDSWKTQEFSGKKKDGVQLQLECLGEEHVAYRRLDFPTLKLSIVGGRPFSCGGQQIFRKR 158
HD+W F KK D VQ QLE LG+ H + RLDFP L LS+VGGRPFS GG K+
Sbjct: 60 HDAWYDATFR-KKGDRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKK 118
Query: 159 LLSVRYGVQDMDESAKRIYKVALGTPDDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGD 218
+ YGV ++ESA+RI A P D +ILLAHNGPSGLGS+ D CG+DW GGD
Sbjct: 119 AVKAVYGVISLEESAQRIIAAAKKAPPDLPLILLAHNGPSGLGSDAEDPCGRDWKPPGGD 178
Query: 219 HGDPDLAQAISLLKETTKLCIPLVVFGHMHKELAYGNGLRKMIVVGADSTIYLNGAIVPR 278
GDPDLA AIS +++ + +PLVVFGHMH L G GLR MI V + T+YLN A VPR
Sbjct: 179 WGDPDLALAISQIQQGRQ--VPLVVFGHMHHRLRRGKGLRNMIAVDREGTVYLNAASVPR 236
Query: 279 VK 280
+
Sbjct: 237 IL 238
|
DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 238 |
| >gnl|CDD|200419 TIGR04168, TIGR04168, TIGR04168 family protein | Back alignment and domain information |
|---|
Score = 297 bits (762), Expect = e-100
Identities = 128/295 (43%), Positives = 171/295 (57%), Gaps = 35/295 (11%)
Query: 60 LQLLKPDLVLFTGDFGNENVEIVQSVAELEFPKAVILGNHDSWKTQEFSGKKK------- 112
L+ L PDLVLF GDFGNE++E+V+++A L PKAVILGNHD+W T G+ K
Sbjct: 1 LKQLGPDLVLFVGDFGNESLELVRAIASLPLPKAVILGNHDAWYTATAWGRDKCPYDRQK 60
Query: 113 -DGVQLQLECLGEEHVAYRRLDFPTLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMDE 171
D +Q QL+ LGE H + + DFP LS+VGGRPFS GG + + R+GV +E
Sbjct: 61 EDRLQQQLDLLGEAHCGWGKRDFPEPGLSVVGGRPFSWGGPGWKLSKFVQARFGVVSFEE 120
Query: 172 SAKRIYKVALGTPDDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLL 231
SA RI A P D L I LAHNGP+GLGS+ CG+DW GGD GDPDLA AI+ +
Sbjct: 121 SAARIVAAAQAAPHDPL-IFLAHNGPTGLGSDAESPCGRDWKPPGGDWGDPDLALAIAQI 179
Query: 232 KETTKLCIPLVVFGHMHKELAYGNG-LRKMIVVGADSTIYLNGAIVPRVKRLIDEQGADS 290
++ + IPLVVFGHMH L + G LR+ +V T+YLN A VPR DE+G
Sbjct: 180 RKLKQ--IPLVVFGHMHHRLRHTKGRLRRTVVRDRQGTVYLNAACVPR--IGKDEEG--- 232
Query: 291 SSVSNKTSFLRPDSKGTVRAFTVVEILDGRIDKIAERWIIVVGDTTTLQEEHILF 345
+R F+ VE+ +G++ ++ RW V + ++ E L+
Sbjct: 233 ---------------RKLRHFSWVELENGKVSHVSHRW---VDNDGSIASEETLY 269
|
Members of this uncharacterized protein family are restricted, in 49 of 50 genomes, to organisms with a family TIGR04167 radical SAM protein, which occasionally is a selenoprotein. Length = 269 |
| >gnl|CDD|163628 cd07385, MPP_YkuE_C, Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Score = 62.3 bits (152), Expect = 2e-11
Identities = 39/171 (22%), Positives = 61/171 (35%), Gaps = 43/171 (25%)
Query: 39 VRIVIVGDVH-----DDWDLQEDSKALQLLKPDLVLFTGDFGNENVEIVQSVAEL----- 88
+RI + D+H L+ + + LKPDLV+ TGD + +V++++ + EL
Sbjct: 2 LRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVLELLLELLKKLK 61
Query: 89 -EFPKAVILGNHDSWKTQE---FSGKKKDGVQLQLECLGEEHVAYRRLDFPTLKLSIVGG 144
+LGNHD + E + G+ + L E V
Sbjct: 62 APLGVYAVLGNHDYYSGDEENWIEALESAGITV----LRNESV----------------- 100
Query: 145 RPFSCGGQQIFRKRLLSVRYGVQDMDESAKRIYKVALGTPDDHLVILLAHN 195
+I GV D + K G +D ILLAH
Sbjct: 101 --------EISVGGATIGIAGVDDGLGRRPDLEKALKGLDEDDPNILLAHQ 143
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 223 |
| >gnl|CDD|215750 pfam00149, Metallophos, Calcineurin-like phosphoesterase | Back alignment and domain information |
|---|
Score = 60.5 bits (146), Expect = 6e-11
Identities = 49/221 (22%), Positives = 72/221 (32%), Gaps = 48/221 (21%)
Query: 40 RIVIVGDVH----DDWDLQEDSKALQLLKPDLVLFTGDF---GNENVEIVQSVAELEF-- 90
RI+++GD+H D L + L KPDLVLF GD G ++E++ + L+
Sbjct: 1 RILVIGDLHGGLDDLDLLLLLLELLGEPKPDLVLFLGDLVDRGPPSLEVLALLFALKLKA 60
Query: 91 --PKAVILGNHDSWKTQEFSGKKKDGVQLQLECLGEEHVAYRRLDFPTLKLSIVGGRPFS 148
P ++ GNHD G LEC G +V I
Sbjct: 61 PGPVYLVRGNHDFDSGNSELGFY-------LECAGLPYVLGNGDVSNGTVEIIGL----- 108
Query: 149 CGGQQIFRKRLLSVRYGVQDMDESAKRIYKVALGTPDDHLVILLAHNGPSGLGSEPNDIC 208
G + E + + L ILL H S +
Sbjct: 109 ----------SSLYGKGGGLVWEEFLELLDLLLLAALVDGKILLVHGPLSP------SLD 152
Query: 209 GKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHK 249
D + G+ DL + + LV+ GH H
Sbjct: 153 SGDDIYLFGEEALEDLLK---------DNGVDLVLRGHTHV 184
|
This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues. Length = 185 |
| >gnl|CDD|163626 cd07383, MPP_Dcr2, Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 50.3 bits (121), Expect = 2e-07
Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 23/86 (26%)
Query: 40 RIVIVGDVHD------DWDLQEDSKALQLL-------KPDLVLFTGD--FG---NENVE- 80
+I+ D+H + D K + + KPDLV+ TGD G N+N
Sbjct: 4 KILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTS 63
Query: 81 ----IVQSVAELEFPKAVILGNHDSW 102
V + + + P A GNHD +
Sbjct: 64 ALDKAVSPMIDRKIPWAATFGNHDGY 89
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 199 |
| >gnl|CDD|163614 cd00838, MPP_superfamily, metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 1e-05
Identities = 18/69 (26%), Positives = 26/69 (37%), Gaps = 10/69 (14%)
Query: 42 VIVGDVHDDWDLQEDSKALQLL---KPDLVLFTGDFGN-------ENVEIVQSVAELEFP 91
++ D+H + + E L KPD VL GD + + L P
Sbjct: 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIP 60
Query: 92 KAVILGNHD 100
V+ GNHD
Sbjct: 61 VYVVPGNHD 69
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 131 |
| >gnl|CDD|163613 cd00144, MPP_PPP_family, phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.001
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 42 VIVGDVHDDW-DLQEDSKALQLLKPDLVLFTGDF---GNENVEIVQSVAEL-EFPKAVIL 96
++GD+H DL + + D ++F GD+ G ++VE++ + L P VIL
Sbjct: 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSVEVIDLLLALKILPDNVIL 60
Query: 97 --GNHDSWKTQEFSG 109
GNH+ G
Sbjct: 61 LRGNHEDMLLNFLYG 75
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 225 |
| >gnl|CDD|221807 pfam12850, Metallophos_2, Calcineurin-like phosphoesterase superfamily domain | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 0.001
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 40 RIVIVGDVHDDWDLQEDSKALQLLK-PDLVLFTGDFGNENVEIVQSVAELEFPKAVILGN 98
+I I+ D H + D AL+ LK DL++ GD N E++ +A++ + GN
Sbjct: 2 KIAIISDTHGNLD--ALEAALEDLKGVDLIIHAGDLVGPN-EVLDLLADIPVY--AVRGN 56
Query: 99 HD 100
+D
Sbjct: 57 ND 58
|
Members of this family are part of the Calcineurin-like phosphoesterase superfamily. Length = 146 |
| >gnl|CDD|224326 COG1408, COG1408, Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Score = 38.9 bits (91), Expect = 0.002
Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 10/73 (13%)
Query: 40 RIVIVGDVHDDWDLQEDSKALQLLK---PDLVLFTGDF-GNENVEIVQSVAEL------E 89
+IV + D+H +E L + PDL++ TGD+ + V ++A
Sbjct: 46 KIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDRPPGVAALALFLAKLKAP 105
Query: 90 FPKAVILGNHDSW 102
+LGNHD
Sbjct: 106 LGVFAVLGNHDYG 118
|
Length = 284 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 349 | |||
| cd07397 | 238 | MPP_DevT Myxococcus xanthus DevT and related prote | 100.0 | |
| COG2129 | 226 | Predicted phosphoesterases, related to the Icc pro | 99.94 | |
| cd07388 | 224 | MPP_Tt1561 Thermus thermophilus Tt1561 and related | 99.93 | |
| cd07395 | 262 | MPP_CSTP1 Homo sapiens CSTP1 and related proteins, | 99.89 | |
| cd07392 | 188 | MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel | 99.88 | |
| PRK11148 | 275 | cyclic 3',5'-adenosine monophosphate phosphodieste | 99.87 | |
| cd07402 | 240 | MPP_GpdQ Enterobacter aerogenes GpdQ and related p | 99.86 | |
| PF14582 | 255 | Metallophos_3: Metallophosphoesterase, calcineurin | 99.84 | |
| TIGR03729 | 239 | acc_ester putative phosphoesterase. Members of thi | 99.83 | |
| cd07396 | 267 | MPP_Nbla03831 Homo sapiens Nbla03831 and related p | 99.83 | |
| PRK11340 | 271 | phosphodiesterase YaeI; Provisional | 99.82 | |
| cd07393 | 232 | MPP_DR1119 Deinococcus radiodurans DR1119 and rela | 99.79 | |
| TIGR00040 | 158 | yfcE phosphoesterase, MJ0936 family. Members of th | 99.79 | |
| cd00839 | 294 | MPP_PAPs purple acid phosphatases of the metalloph | 99.79 | |
| TIGR00583 | 405 | mre11 DNA repair protein (mre11). All proteins in | 99.79 | |
| PLN02533 | 427 | probable purple acid phosphatase | 99.79 | |
| cd07401 | 256 | MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal | 99.78 | |
| cd07379 | 135 | MPP_239FB Homo sapiens 239FB and related proteins, | 99.78 | |
| cd07378 | 277 | MPP_ACP5 Homo sapiens acid phosphatase 5 and relat | 99.78 | |
| PF12850 | 156 | Metallophos_2: Calcineurin-like phosphoesterase su | 99.78 | |
| cd07404 | 166 | MPP_MS158 Microscilla MS158 and related proteins, | 99.76 | |
| cd07385 | 223 | MPP_YkuE_C Bacillus subtilis YkuE and related prot | 99.76 | |
| cd07399 | 214 | MPP_YvnB Bacillus subtilis YvnB and related protei | 99.76 | |
| PRK10966 | 407 | exonuclease subunit SbcD; Provisional | 99.76 | |
| cd00840 | 223 | MPP_Mre11_N Mre11 nuclease, N-terminal metallophos | 99.75 | |
| cd07394 | 178 | MPP_Vps29 Homo sapiens Vps29 and related proteins, | 99.75 | |
| PRK09453 | 182 | phosphodiesterase; Provisional | 99.74 | |
| PHA02546 | 340 | 47 endonuclease subunit; Provisional | 99.73 | |
| COG0622 | 172 | Predicted phosphoesterase [General function predic | 99.73 | |
| cd00841 | 155 | MPP_YfcE Escherichia coli YfcE and related protein | 99.72 | |
| cd07400 | 144 | MPP_YydB Bacillus subtilis YydB and related protei | 99.71 | |
| COG0420 | 390 | SbcD DNA repair exonuclease [DNA replication, reco | 99.7 | |
| cd07383 | 199 | MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase | 99.68 | |
| PF00149 | 200 | Metallophos: Calcineurin-like phosphoesterase; Int | 99.68 | |
| TIGR00619 | 253 | sbcd exonuclease SbcD. This family is based on the | 99.65 | |
| cd08163 | 257 | MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related | 99.63 | |
| PTZ00422 | 394 | glideosome-associated protein 50; Provisional | 99.62 | |
| cd00842 | 296 | MPP_ASMase acid sphingomyelinase and related prote | 99.62 | |
| COG1409 | 301 | Icc Predicted phosphohydrolases [General function | 99.62 | |
| COG1768 | 230 | Predicted phosphohydrolase [General function predi | 99.6 | |
| PRK05340 | 241 | UDP-2,3-diacylglucosamine hydrolase; Provisional | 99.57 | |
| cd07403 | 129 | MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel | 99.57 | |
| COG1408 | 284 | Predicted phosphohydrolases [General function pred | 99.55 | |
| TIGR01854 | 231 | lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. | 99.54 | |
| KOG2679 | 336 | consensus Purple (tartrate-resistant) acid phospha | 99.52 | |
| KOG1378 | 452 | consensus Purple acid phosphatase [Carbohydrate tr | 99.43 | |
| cd08165 | 156 | MPP_MPPE1 human MPPE1 and related proteins, metall | 99.4 | |
| cd00845 | 252 | MPP_UshA_N_like Escherichia coli UshA-like family, | 99.33 | |
| cd00838 | 131 | MPP_superfamily metallophosphatase superfamily, me | 99.3 | |
| PRK09968 | 218 | serine/threonine-specific protein phosphatase 2; P | 99.29 | |
| cd07424 | 207 | MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do | 99.28 | |
| cd07398 | 217 | MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat | 99.27 | |
| cd07410 | 277 | MPP_CpdB_N Escherichia coli CpdB and related prote | 99.27 | |
| cd07411 | 264 | MPP_SoxB_N Thermus thermophilus SoxB and related p | 99.26 | |
| cd07386 | 243 | MPP_DNA_pol_II_small_archeal_C archeal DNA polymer | 99.26 | |
| COG2908 | 237 | Uncharacterized protein conserved in bacteria [Fun | 99.26 | |
| KOG1432 | 379 | consensus Predicted DNA repair exonuclease SIA1 [G | 99.23 | |
| PRK04036 | 504 | DNA polymerase II small subunit; Validated | 99.23 | |
| TIGR03767 | 496 | P_acnes_RR metallophosphoesterase, PPA1498 family. | 99.22 | |
| cd07406 | 257 | MPP_CG11883_N Drosophila melanogaster CG11883 and | 99.22 | |
| cd07390 | 168 | MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro | 99.21 | |
| cd07384 | 171 | MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re | 99.2 | |
| PRK11439 | 218 | pphA serine/threonine protein phosphatase 1; Provi | 99.19 | |
| cd08166 | 195 | MPP_Cdc1_like_1 uncharacterized subgroup related t | 99.18 | |
| cd07408 | 257 | MPP_SA0022_N Staphylococcus aureus SA0022 and rela | 99.17 | |
| cd00844 | 262 | MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t | 99.17 | |
| cd07423 | 234 | MPP_PrpE Bacillus subtilis PrpE and related protei | 99.12 | |
| cd07409 | 281 | MPP_CD73_N CD73 ecto-5'-nucleotidase and related p | 99.12 | |
| TIGR03768 | 492 | RPA4764 metallophosphoesterase, RPA4764 family. Th | 99.12 | |
| KOG3947 | 305 | consensus Phosphoesterases [General function predi | 99.07 | |
| KOG2310 | 646 | consensus DNA repair exonuclease MRE11 [Replicatio | 99.07 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 99.02 | |
| cd07425 | 208 | MPP_Shelphs Shewanella-like phosphatases, metallop | 99.0 | |
| cd07391 | 172 | MPP_PF1019 Pyrococcus furiosus PF1019 and related | 98.98 | |
| cd07412 | 288 | MPP_YhcR_N Bacillus subtilis YhcR endonuclease and | 98.97 | |
| cd07405 | 285 | MPP_UshA_N Escherichia coli UshA and related prote | 98.93 | |
| COG4186 | 186 | Predicted phosphoesterase or phosphohydrolase [Gen | 98.9 | |
| PRK09558 | 551 | ushA bifunctional UDP-sugar hydrolase/5'-nucleotid | 98.83 | |
| PRK00166 | 275 | apaH diadenosine tetraphosphatase; Reviewed | 98.79 | |
| KOG3770 | 577 | consensus Acid sphingomyelinase and PHM5 phosphate | 98.75 | |
| cd07407 | 282 | MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and | 98.74 | |
| cd08164 | 193 | MPP_Ted1 Saccharomyces cerevisiae Ted1 and related | 98.73 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.72 | |
| PHA02239 | 235 | putative protein phosphatase | 98.67 | |
| COG1311 | 481 | HYS2 Archaeal DNA polymerase II, small subunit/DNA | 98.63 | |
| cd07380 | 150 | MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re | 98.63 | |
| cd07382 | 255 | MPP_DR1281 Deinococcus radiodurans DR1281 and rela | 98.61 | |
| PRK09418 | 780 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.57 | |
| cd08162 | 313 | MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA | 98.57 | |
| COG0737 | 517 | UshA 5'-nucleotidase/2',3'-cyclic phosphodiesteras | 98.55 | |
| KOG3662 | 410 | consensus Cell division control protein/predicted | 98.55 | |
| PRK11907 | 814 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.51 | |
| TIGR00024 | 225 | SbcD_rel_arch putative phosphoesterase, SbcD/Mre11 | 98.51 | |
| TIGR00668 | 279 | apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric | 98.5 | |
| cd07422 | 257 | MPP_ApaH Escherichia coli ApaH and related protein | 98.48 | |
| KOG3325 | 183 | consensus Membrane coat complex Retromer, subunit | 98.45 | |
| TIGR01390 | 626 | CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphod | 98.44 | |
| PRK13625 | 245 | bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision | 98.42 | |
| PRK09420 | 649 | cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosp | 98.39 | |
| TIGR00282 | 266 | metallophosphoesterase, MG_246/BB_0505 family. A m | 98.36 | |
| TIGR01530 | 550 | nadN NAD pyrophosphatase/5'-nucleotidase NadN. Thi | 98.33 | |
| cd07413 | 222 | MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat | 98.3 | |
| cd00144 | 225 | MPP_PPP_family phosphoprotein phosphatases of the | 98.28 | |
| cd07421 | 304 | MPP_Rhilphs Rhilph phosphatases, metallophosphatas | 98.2 | |
| KOG2863 | 456 | consensus RNA lariat debranching enzyme [RNA proce | 98.05 | |
| COG1407 | 235 | Predicted ICC-like phosphoesterases [General funct | 98.0 | |
| smart00156 | 271 | PP2Ac Protein phosphatase 2A homologues, catalytic | 97.67 | |
| cd07416 | 305 | MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca | 97.63 | |
| cd07387 | 257 | MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2 | 97.59 | |
| cd07420 | 321 | MPP_RdgC Drosophila melanogaster RdgC and related | 97.53 | |
| PHA03008 | 234 | hypothetical protein; Provisional | 97.5 | |
| cd07414 | 293 | MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme | 97.45 | |
| cd07415 | 285 | MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein | 97.44 | |
| PTZ00244 | 294 | serine/threonine-protein phosphatase PP1; Provisio | 97.4 | |
| PTZ00480 | 320 | serine/threonine-protein phosphatase; Provisional | 97.34 | |
| PTZ00239 | 303 | serine/threonine protein phosphatase 2A; Provision | 97.34 | |
| smart00854 | 239 | PGA_cap Bacterial capsule synthesis protein PGA_ca | 97.3 | |
| cd07418 | 377 | MPP_PP7 PP7, metallophosphatase domain. PP7 is a p | 97.3 | |
| cd07381 | 239 | MPP_CapA CapA and related proteins, metallophospha | 97.27 | |
| cd07417 | 316 | MPP_PP5_C PP5, C-terminal metallophosphatase domai | 97.25 | |
| PF09423 | 453 | PhoD: PhoD-like phosphatase; InterPro: IPR018946 T | 97.15 | |
| cd07419 | 311 | MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a | 97.15 | |
| COG1692 | 266 | Calcineurin-like phosphoesterase [General function | 96.96 | |
| PF09587 | 250 | PGA_cap: Bacterial capsule synthesis protein PGA_c | 96.85 | |
| PF04042 | 209 | DNA_pol_E_B: DNA polymerase alpha/epsilon subunit | 95.91 | |
| KOG4419 | 602 | consensus 5' nucleotidase [Nucleotide transport an | 95.02 | |
| KOG0374 | 331 | consensus Serine/threonine specific protein phosph | 94.91 | |
| KOG0372 | 303 | consensus Serine/threonine specific protein phosph | 94.77 | |
| PF13277 | 253 | YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C. | 93.92 | |
| KOG0371 | 319 | consensus Serine/threonine protein phosphatase 2A, | 93.29 | |
| KOG0373 | 306 | consensus Serine/threonine specific protein phosph | 92.71 | |
| KOG0375 | 517 | consensus Serine-threonine phosphatase 2B, catalyt | 92.49 | |
| PTZ00235 | 291 | DNA polymerase epsilon subunit B; Provisional | 90.39 | |
| COG5555 | 392 | Cytolysin, a secreted calcineurin-like phosphatase | 88.6 | |
| COG3540 | 522 | PhoD Phosphodiesterase/alkaline phosphatase D [Ino | 86.42 | |
| PRK01395 | 104 | V-type ATP synthase subunit F; Provisional | 80.51 |
| >cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-42 Score=305.37 Aligned_cols=237 Identities=59% Similarity=0.998 Sum_probs=210.9
Q ss_pred cEEEEEeCCCCCcChHHHHHHhhCCCCCEEEEcCCCCCCcHHHHHHHHcCCCCEEEEcCCCCCCccccccccchhHHHHH
Q 018902 39 VRIVIVGDVHDDWDLQEDSKALQLLKPDLVLFTGDFGNENVEIVQSVAELEFPKAVILGNHDSWKTQEFSGKKKDGVQLQ 118 (349)
Q Consensus 39 mril~iSDlH~~~~~~~~~~~i~~~~pD~vI~~GDl~~~~~~~l~~l~~l~~Pi~~V~GNHD~~~~~~~~~~~~~~~~~~ 118 (349)
+||+++||+|.++.. ...+.++..+||+|+++||++++..++++.+.+++.|+++|+||||++..... ......++..
T Consensus 1 ~rIa~isDiHg~~~~-~~~~~l~~~~pD~Vl~~GDi~~~~~~~~~~l~~l~~p~~~V~GNHD~~~~~~~-~~k~~~l~~~ 78 (238)
T cd07397 1 LRIAIVGDVHGQWDL-EDIKALHLLQPDLVLFVGDFGNESVQLVRAISSLPLPKAVILGNHDAWYDATF-RKKGDRVQEQ 78 (238)
T ss_pred CEEEEEecCCCCchH-HHHHHHhccCCCEEEECCCCCcChHHHHHHHHhCCCCeEEEcCCCcccccccc-cchHHHHHHH
Confidence 589999999998775 34567778899999999999999889999999988999999999998764321 1134458888
Q ss_pred HHHhCCcceeeEEeecCCceEEEeCCeeeecCCchhhhhhhhhhccCCcchHHHHHHHHHHHhCCCCCCeEEEEeccCCC
Q 018902 119 LECLGEEHVAYRRLDFPTLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMDESAKRIYKVALGTPDDHLVILLAHNGPS 198 (349)
Q Consensus 119 l~~~~~~~~~~~~l~~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~Ilv~H~PP~ 198 (349)
++.+++.++.+..++++...+.++|++||.++|..|......+..|+..++++...++.+.++..+++..+|+++|.+|.
T Consensus 79 L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~~~~~~~~~~VliaH~~~~ 158 (238)
T cd07397 79 LELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAAKKAPPDLPLILLAHNGPS 158 (238)
T ss_pred HHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHhhhcCCCCCeEEEeCcCCc
Confidence 99999999999888998889999999999999999888777888899999999999999988777778889999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCccEEEeCccCCCcccCCcceEEEEEcCCceEEEeecccce
Q 018902 199 GLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKELAYGNGLRKMIVVGADSTIYLNGAIVPR 278 (349)
Q Consensus 199 ~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~~~~~g~~~~~~~~~~gt~yvn~g~~pr 278 (349)
+.|+++.++||+||...+++||+++|++++.++.. +..+++|+|||+|+.++++.+.++++..+.+||+|+|++++||
T Consensus 159 G~g~~~~~~cg~d~~~~~~~~G~~~l~~ai~~~~~--~~~~~l~~fGH~H~~l~~~~~~r~~~~~~~~gt~y~N~a~~pr 236 (238)
T cd07397 159 GLGSDAEDPCGRDWKPPGGDWGDPDLALAISQIQQ--GRQVPLVVFGHMHHRLRRGKGLRNMIAVDREGTVYLNAASVPR 236 (238)
T ss_pred CCCcccccccccccCCcCCCCCCHHHHHHHHHHhc--cCCCCEEEeCCccCcccccccccceeeecCCCeEEEecccccc
Confidence 99999999999999999999999999999998764 4579999999999999999889999999999999999999999
Q ss_pred e
Q 018902 279 V 279 (349)
Q Consensus 279 ~ 279 (349)
+
T Consensus 237 ~ 237 (238)
T cd07397 237 I 237 (238)
T ss_pred C
Confidence 6
|
DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy |
| >COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-25 Score=192.23 Aligned_cols=207 Identities=24% Similarity=0.333 Sum_probs=145.6
Q ss_pred CccEEEEEeCCCCCcCh-HHHHHHhhCCCCCEEEEcCCCC--CC-----cHHH--HHHHHcCCCCEEEEcCCCCCCcccc
Q 018902 37 SVVRIVIVGDVHDDWDL-QEDSKALQLLKPDLVLFTGDFG--NE-----NVEI--VQSVAELEFPKAVILGNHDSWKTQE 106 (349)
Q Consensus 37 ~~mril~iSDlH~~~~~-~~~~~~i~~~~pD~vI~~GDl~--~~-----~~~~--l~~l~~l~~Pi~~V~GNHD~~~~~~ 106 (349)
.+||++.++|+|+.... +++...+...++|+++++|||+ +. ..+. ++.+....+|++++|||.|...
T Consensus 2 ~~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~~~~~~~~e~l~~~~~~v~avpGNcD~~~--- 78 (226)
T COG2129 2 KKMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEVAEELNKLEALKELGIPVLAVPGNCDPPE--- 78 (226)
T ss_pred CcceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchHHHHhhhHHHHHHhcCCeEEEEcCCCChHH---
Confidence 46999999999999764 5666666667999999999999 42 1222 5677777999999999999753
Q ss_pred ccccchhHHHHHHHHhCCcceeeEEeecCCceEEEeCC---eeeecCCchhhhhhhhhhccCCcchHHHHHHHHHHHhCC
Q 018902 107 FSGKKKDGVQLQLECLGEEHVAYRRLDFPTLKLSIVGG---RPFSCGGQQIFRKRLLSVRYGVQDMDESAKRIYKVALGT 183 (349)
Q Consensus 107 ~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~g~---~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 183 (349)
....++..+..-.. +..+..++.+.++|+ +||++... ++++++...+.++.+...+
T Consensus 79 --------v~~~l~~~~~~v~~-~v~~i~~~~~~G~Ggsn~tp~nt~~e-----------~~E~~I~s~l~~~v~~~~~- 137 (226)
T COG2129 79 --------VIDVLKNAGVNVHG-RVVEIGGYGFVGFGGSNPTPFNTPRE-----------FSEDEIYSKLKSLVKKADN- 137 (226)
T ss_pred --------HHHHHHhccccccc-ceEEecCcEEEEecccCCCCCCCccc-----------cCHHHHHHHHHHHHhcccC-
Confidence 23334443322222 566777788887776 44544332 5555555444444443321
Q ss_pred CCCCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCC-CCHHHHHHHHHHHHhcCCCccEEEeCccCCCcccCCcceEEEE
Q 018902 184 PDDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDH-GDPDLAQAISLLKETTKLCIPLVVFGHMHKELAYGNGLRKMIV 262 (349)
Q Consensus 184 ~~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~-G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~~~~~g~~~~~~ 262 (349)
..+|+++|+||+++..+ .+.+..| || +++++++++. +|.+++|||+|++ +|++++
T Consensus 138 ---~~~Il~~HaPP~gt~~d---------~~~g~~hvGS----~~vr~~ieef--qP~l~i~GHIHEs----~G~d~i-- 193 (226)
T COG2129 138 ---PVNILLTHAPPYGTLLD---------TPSGYVHVGS----KAVRKLIEEF--QPLLGLHGHIHES----RGIDKI-- 193 (226)
T ss_pred ---cceEEEecCCCCCcccc---------CCCCccccch----HHHHHHHHHh--CCceEEEeeeccc----cccccc--
Confidence 12399999999998433 2223256 99 6777787744 5999999999998 899998
Q ss_pred EcCCceEEEeecccceeeccCCccCCCCCcccccccccCCCCCCceeeEEEEEEeCCeEeEE
Q 018902 263 VGADSTIYLNGAIVPRVKRLIDEQGADSSSVSNKTSFLRPDSKGTVRAFTVVEILDGRIDKI 324 (349)
Q Consensus 263 ~~~~gt~yvn~g~~pr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~v~i~~~~v~~~ 324 (349)
|+|+++|||.. ....|+++++++..|..+
T Consensus 194 ---G~TivVNPG~~------------------------------~~g~yA~i~l~~~~Vk~~ 222 (226)
T COG2129 194 ---GNTIVVNPGPL------------------------------GEGRYALIELEKEVVKLE 222 (226)
T ss_pred ---CCeEEECCCCc------------------------------cCceEEEEEecCcEEEEE
Confidence 99999999983 125799999998866554
|
|
| >cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-24 Score=192.44 Aligned_cols=187 Identities=13% Similarity=0.114 Sum_probs=116.9
Q ss_pred CccEEEEEeCCCCCcCh-HHHHHHhhCCCCCEEEEcCCCCCCc------HHHHHHHHcCCCCEEEEcCCCCCCccccccc
Q 018902 37 SVVRIVIVGDVHDDWDL-QEDSKALQLLKPDLVLFTGDFGNEN------VEIVQSVAELEFPKAVILGNHDSWKTQEFSG 109 (349)
Q Consensus 37 ~~mril~iSDlH~~~~~-~~~~~~i~~~~pD~vI~~GDl~~~~------~~~l~~l~~l~~Pi~~V~GNHD~~~~~~~~~ 109 (349)
+.+||+++||+|.+... +++++.+++.++|+||++||+++.. .++++.+.+++.|+++|+||||.. ...
T Consensus 3 ~~~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~l~~pv~~V~GNhD~~-v~~--- 78 (224)
T cd07388 3 TVRYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGEAHLPTFYVPGPQDAP-LWE--- 78 (224)
T ss_pred ceeEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhcCCceEEEcCCCChH-HHH---
Confidence 46899999999998664 5566666667999999999999853 456777877789999999999963 110
Q ss_pred cchhHHHHHHHH----hCCcceeeEEeecCC-ceEEEeCCeeeecCCchhhhhhhhhhccCCcch----HHHHHHHHHHH
Q 018902 110 KKKDGVQLQLEC----LGEEHVAYRRLDFPT-LKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDM----DESAKRIYKVA 180 (349)
Q Consensus 110 ~~~~~~~~~l~~----~~~~~~~~~~l~~~~-~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~----~~~~~~l~~~l 180 (349)
.+...+.. .....+.-......+ +.+.++||.+.. .. .+++++. .+..+.+.+.+
T Consensus 79 ----~l~~~~~~~~~~p~~~~lh~~~~~~~g~~~~~GlGGs~~~-~~-----------e~sE~e~~~~~~~~~~~~l~~~ 142 (224)
T cd07388 79 ----YLREAYNAELVHPEIRNVHETFAFWRGPYLVAGVGGEIAD-EG-----------EPEEHEALRYPAWVAEYRLKAL 142 (224)
T ss_pred ----HHHHHhcccccCccceecCCCeEEecCCeEEEEecCCcCC-CC-----------CcCHHHHhhhhhhHHHHHHHHH
Confidence 11111100 000001011122223 567777764311 10 1222221 01113333444
Q ss_pred hCCCCCCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCC-CCHHHHHHHHHHHHhcCCCccEEEeCccCCCcccCCcceE
Q 018902 181 LGTPDDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDH-GDPDLAQAISLLKETTKLCIPLVVFGHMHKELAYGNGLRK 259 (349)
Q Consensus 181 ~~~~~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~-G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~~~~~g~~~ 259 (349)
.+. ..++.||++|+||++++. .| |+ ++++++++ +++|.+++|||+|+. ..+
T Consensus 143 ~~~-~~~~~VLv~H~PP~g~g~---------------~h~GS----~alr~~I~--~~~P~l~i~GHih~~------~~~ 194 (224)
T cd07388 143 WEL-KDYRKVFLFHTPPYHKGL---------------NEQGS----HEVAHLIK--THNPLVVLVGGKGQK------HEL 194 (224)
T ss_pred HhC-CCCCeEEEECCCCCCCCC---------------CccCH----HHHHHHHH--HhCCCEEEEcCCcee------EEE
Confidence 443 356799999999998731 24 77 56666776 446999999999933 345
Q ss_pred EEEEcCCceEEEeeccc
Q 018902 260 MIVVGADSTIYLNGAIV 276 (349)
Q Consensus 260 ~~~~~~~gt~yvn~g~~ 276 (349)
+ ++|+++|+|+.
T Consensus 195 ~-----g~t~vvNpg~~ 206 (224)
T cd07388 195 L-----GASWVVVPGDL 206 (224)
T ss_pred e-----CCEEEECCCcc
Confidence 6 89999999973
|
This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets, |
| >cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.8e-21 Score=175.09 Aligned_cols=224 Identities=14% Similarity=0.151 Sum_probs=136.9
Q ss_pred CCccEEEEEeCCCCCcC-----------------hHHHHHHhhCC--CCCEEEEcCCCCCCc----------HHHHHHHH
Q 018902 36 ASVVRIVIVGDVHDDWD-----------------LQEDSKALQLL--KPDLVLFTGDFGNEN----------VEIVQSVA 86 (349)
Q Consensus 36 ~~~mril~iSDlH~~~~-----------------~~~~~~~i~~~--~pD~vI~~GDl~~~~----------~~~l~~l~ 86 (349)
+.+++|+++||+|.+.. .+..++.+++. +||+||++|||++.. ..+.+.+.
T Consensus 2 ~~~~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~ 81 (262)
T cd07395 2 SGPFYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLS 81 (262)
T ss_pred CCCEEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHh
Confidence 35799999999999842 13455667666 999999999999742 12344455
Q ss_pred cC--CCCEEEEcCCCCCCccccccccchhHHHHHHHHhCCcceeeEEeecCCceEEEeCCeeeecCCchhhhhhhhhhcc
Q 018902 87 EL--EFPKAVILGNHDSWKTQEFSGKKKDGVQLQLECLGEEHVAYRRLDFPTLKLSIVGGRPFSCGGQQIFRKRLLSVRY 164 (349)
Q Consensus 87 ~l--~~Pi~~V~GNHD~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~ 164 (349)
++ ++|+++++||||...... ...+......++..++.+ ..+++.+.++++..+...+. .
T Consensus 82 ~~~~~vp~~~i~GNHD~~~~~~-----~~~~~~f~~~~g~~~y~~---~~~~~~~i~lds~~~~~~~~-----------~ 142 (262)
T cd07395 82 LLDPDIPLVCVCGNHDVGNTPT-----EESIKDYRDVFGDDYFSF---WVGGVFFIVLNSQLFFDPSE-----------V 142 (262)
T ss_pred hccCCCcEEEeCCCCCCCCCCC-----hhHHHHHHHHhCCcceEE---EECCEEEEEeccccccCccc-----------c
Confidence 54 689999999999853211 112333334455443332 23556666665532211100 1
Q ss_pred CCcchHHHHHHHHHHHhCCC--CCCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCccEE
Q 018902 165 GVQDMDESAKRIYKVALGTP--DDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLV 242 (349)
Q Consensus 165 ~~~~~~~~~~~l~~~l~~~~--~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lv 242 (349)
+ ....++++|+.+.+++.. ..+++|+++|+||+..+... .++.. ....+.+..+.++++ +++++++
T Consensus 143 ~-~~~~~ql~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~-----~~~~~----~~~~~~~~~l~~ll~--~~~V~~v 210 (262)
T cd07395 143 P-ELAQAQDVWLEEQLEIAKESDCKHVIVFQHIPWFLEDPDE-----EDSYF----NIPKSVRKPLLDKFK--KAGVKAV 210 (262)
T ss_pred c-cchHHHHHHHHHHHHHHHhccCCcEEEEECcCCccCCCCC-----CcccC----CcCHHHHHHHHHHHH--hcCceEE
Confidence 1 123456788888887764 55789999999986432110 00000 012455677888888 5689999
Q ss_pred EeCccCCCcccCCcceEEEEEcCCceEEEeecccceeeccCCccCCCCCcccccccccCCCCCCceeeEEEEEEeCCeEe
Q 018902 243 VFGHMHKELAYGNGLRKMIVVGADSTIYLNGAIVPRVKRLIDEQGADSSSVSNKTSFLRPDSKGTVRAFTVVEILDGRID 322 (349)
Q Consensus 243 l~GH~H~~~~~~~g~~~~~~~~~~gt~yvn~g~~pr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~v~i~~~~v~ 322 (349)
+|||+|.... ... +|+.|+.+++.-... .....+|.++++++++++
T Consensus 211 ~~GH~H~~~~-----~~~-----~g~~~~~~~~~~~~~------------------------~~~~~g~~~~~v~~~~~~ 256 (262)
T cd07395 211 FSGHYHRNAG-----GRY-----GGLEMVVTSAIGAQL------------------------GNDKSGLRIVKVTEDKIV 256 (262)
T ss_pred EECccccCCc-----eEE-----CCEEEEEcCceeccc------------------------CCCCCCcEEEEECCCcee
Confidence 9999998731 122 466666555431100 134578999999988885
Q ss_pred EE
Q 018902 323 KI 324 (349)
Q Consensus 323 ~~ 324 (349)
.+
T Consensus 257 ~~ 258 (262)
T cd07395 257 HE 258 (262)
T ss_pred ee
Confidence 54
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th |
| >cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-21 Score=170.42 Aligned_cols=181 Identities=22% Similarity=0.269 Sum_probs=105.2
Q ss_pred EEEEeCCCCCcChHHHHHHhhCCCCCEEEEcCCCCCCc----HHHHHHHHcCCCCEEEEcCCCCCCccccccccchhHHH
Q 018902 41 IVIVGDVHDDWDLQEDSKALQLLKPDLVLFTGDFGNEN----VEIVQSVAELEFPKAVILGNHDSWKTQEFSGKKKDGVQ 116 (349)
Q Consensus 41 il~iSDlH~~~~~~~~~~~i~~~~pD~vI~~GDl~~~~----~~~l~~l~~l~~Pi~~V~GNHD~~~~~~~~~~~~~~~~ 116 (349)
|+++||+|++...... ..++..++|+||++||+++.. .+.++.+.+++.|+++|+||||.....
T Consensus 1 i~~~sD~H~~~~~~~~-~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~l~~~~~p~~~v~GNHD~~~~~----------- 68 (188)
T cd07392 1 ILAISDIHGDVEKLEA-IILKAEEADAVIVAGDITNFGGKEAAVEINLLLAIGVPVLAVPGNCDTPEIL----------- 68 (188)
T ss_pred CEEEEecCCCHHHHHH-HHhhccCCCEEEECCCccCcCCHHHHHHHHHHHhcCCCEEEEcCCCCCHHHH-----------
Confidence 6899999998654222 456678999999999999853 234477777889999999999964321
Q ss_pred HHHHHhCCcceeeEEeecCCceEEEeCCee---eecCCchhhhhhhhhhccCCcchHHHHHHHHHHHhCCCCCCeEEEEe
Q 018902 117 LQLECLGEEHVAYRRLDFPTLKLSIVGGRP---FSCGGQQIFRKRLLSVRYGVQDMDESAKRIYKVALGTPDDHLVILLA 193 (349)
Q Consensus 117 ~~l~~~~~~~~~~~~l~~~~~~i~~~g~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~Ilv~ 193 (349)
..+. .+...........+++.+.++++.. ++..+ .+..++ +.++ +.+ ...+.+++|+++
T Consensus 69 ~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-----------~~~~~~----l~~~-~~l-~~~~~~~~ilv~ 130 (188)
T cd07392 69 GLLT-SAGLNLHGKVVEVGGYTFVGIGGSNPTPFNTPI-----------ELSEEE----IVSD-GRL-NNLLAKNLILVT 130 (188)
T ss_pred Hhhh-cCcEecCCCEEEECCEEEEEeCCCCCCCCCCcc-----------ccCHHH----HHHh-hhh-hccCCCCeEEEE
Confidence 1110 0100011111223445555554421 11100 122122 2222 222 233457899999
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCccEEEeCccCCCcccCCcceEEEEEcCCceEEEee
Q 018902 194 HNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKELAYGNGLRKMIVVGADSTIYLNG 273 (349)
Q Consensus 194 H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~~~~~g~~~~~~~~~~gt~yvn~ 273 (349)
|+||+.... |........|+ +++.++++ ++++++++|||+|.. .+..++ ++|.++|+
T Consensus 131 H~pp~~~~~--------d~~~~~~~~g~----~~l~~li~--~~~~~~~l~GH~H~~----~~~~~~-----~~~~~~n~ 187 (188)
T cd07392 131 HAPPYGTAV--------DRVSGGFHVGS----KAIRKFIE--ERQPLLCICGHIHES----RGVDKI-----GNTLVVNP 187 (188)
T ss_pred CCCCcCCcc--------cccCCCCccCC----HHHHHHHH--HhCCcEEEEeccccc----cceeee-----CCeEEecC
Confidence 999976311 11111111266 44555665 346999999999998 334455 78999998
Q ss_pred c
Q 018902 274 A 274 (349)
Q Consensus 274 g 274 (349)
|
T Consensus 188 G 188 (188)
T cd07392 188 G 188 (188)
T ss_pred C
Confidence 7
|
PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina |
| >PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.8e-20 Score=173.11 Aligned_cols=224 Identities=19% Similarity=0.248 Sum_probs=126.9
Q ss_pred CCccEEEEEeCCCCCcC-------------hHHHHHHhhCC--CCCEEEEcCCCCCCc-----HHHHHHHHcCCCCEEEE
Q 018902 36 ASVVRIVIVGDVHDDWD-------------LQEDSKALQLL--KPDLVLFTGDFGNEN-----VEIVQSVAELEFPKAVI 95 (349)
Q Consensus 36 ~~~mril~iSDlH~~~~-------------~~~~~~~i~~~--~pD~vI~~GDl~~~~-----~~~l~~l~~l~~Pi~~V 95 (349)
.++|||+++||+|+... .++.++.+++. +||+||++|||++.. ..+.+.+.+++.|+++|
T Consensus 12 ~~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~~~~~~~~~~~l~~l~~Pv~~v 91 (275)
T PRK11148 12 EARVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHSSEAYQHFAEGIAPLRKPCVWL 91 (275)
T ss_pred CCCEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCCHHHHHHHHHHHhhcCCcEEEe
Confidence 46799999999997321 14566776643 799999999999853 34666777889999999
Q ss_pred cCCCCCCccccccccchhHHHHHHHHhCCcceeeEEeecCCceEEEeCCeeeecCCchhhhhhhhhhccCCcchHHHHHH
Q 018902 96 LGNHDSWKTQEFSGKKKDGVQLQLECLGEEHVAYRRLDFPTLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMDESAKR 175 (349)
Q Consensus 96 ~GNHD~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 175 (349)
+||||.... +...+...+... ....+..+.+.+.++++.. .|.. ...++ .++++|
T Consensus 92 ~GNHD~~~~----------~~~~~~~~~~~~-~~~~~~~~~~~~i~Lds~~---~g~~-------~G~l~----~~ql~w 146 (275)
T PRK11148 92 PGNHDFQPA----------MYSALQDAGISP-AKHVLIGEHWQILLLDSQV---FGVP-------HGELS----EYQLEW 146 (275)
T ss_pred CCCCCChHH----------HHHHHhhcCCCc-cceEEecCCEEEEEecCCC---CCCc-------CCEeC----HHHHHH
Confidence 999997421 122222111110 1111222334455444421 1110 01122 245678
Q ss_pred HHHHHhCCCCCCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCC-CccEEEeCccCCCcccC
Q 018902 176 IYKVALGTPDDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKL-CIPLVVFGHMHKELAYG 254 (349)
Q Consensus 176 l~~~l~~~~~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~-~~~lvl~GH~H~~~~~~ 254 (349)
+.+.+++.+ +++.||++||+|...+.. |.......+. +.+.++++ ++ ++++|++||+|.....
T Consensus 147 L~~~L~~~~-~~~~vv~~hH~P~~~~~~--------~~d~~~l~n~----~~l~~ll~--~~~~v~~vl~GH~H~~~~~- 210 (275)
T PRK11148 147 LERKLADAP-ERHTLVLLHHHPLPAGCA--------WLDQHSLRNA----HELAEVLA--KFPNVKAILCGHIHQELDL- 210 (275)
T ss_pred HHHHHhhCC-CCCeEEEEcCCCCCCCcc--------hhhccCCCCH----HHHHHHHh--cCCCceEEEecccChHHhc-
Confidence 888887764 456788888877654321 1111111112 45666776 43 7999999999997321
Q ss_pred CcceEEEEEcCCceEEE-eecccceeeccCCccCCCCCcccccccccCCCCCCceeeEEEEEEe-CCeEeEEE
Q 018902 255 NGLRKMIVVGADSTIYL-NGAIVPRVKRLIDEQGADSSSVSNKTSFLRPDSKGTVRAFTVVEIL-DGRIDKIA 325 (349)
Q Consensus 255 ~g~~~~~~~~~~gt~yv-n~g~~pr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~v~i~-~~~v~~~~ 325 (349)
.. +|+.|+ +++........... + .. ..++.+|.++++. +|+++...
T Consensus 211 ----~~-----~gi~~~~~ps~~~q~~~~~~~-----~-----~~------~~~~~g~~~~~l~~~g~~~~~~ 258 (275)
T PRK11148 211 ----DW-----NGRRLLATPSTCVQFKPHCTN-----F-----TL------DTVAPGWRELELHADGSLETEV 258 (275)
T ss_pred ----eE-----CCEEEEEcCCCcCCcCCCCCc-----c-----cc------ccCCCcEEEEEEcCCCcEEEEE
Confidence 22 566554 44443332221110 0 00 1355789999995 56665544
|
|
| >cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.3e-20 Score=168.69 Aligned_cols=188 Identities=20% Similarity=0.289 Sum_probs=114.9
Q ss_pred EEEEEeCCCCCcC-------------hHHHHHHhhCC--CCCEEEEcCCCCCCc-----HHHHHHHHcCCCCEEEEcCCC
Q 018902 40 RIVIVGDVHDDWD-------------LQEDSKALQLL--KPDLVLFTGDFGNEN-----VEIVQSVAELEFPKAVILGNH 99 (349)
Q Consensus 40 ril~iSDlH~~~~-------------~~~~~~~i~~~--~pD~vI~~GDl~~~~-----~~~l~~l~~l~~Pi~~V~GNH 99 (349)
||+++||+|.+.. .+++++.+++. +||+||++|||++.. ..+.+.+.++++|+++|+|||
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~~~~p~~~v~GNH 80 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSPESYERLRELLAALPIPVYLLPGNH 80 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCHHHHHHHHHHHhhcCCCEEEeCCCC
Confidence 6999999999853 15567777776 999999999999852 346666777789999999999
Q ss_pred CCCccccccccchhHHHHHHHHhC-CcceeeEEeecCCceEEEeCCeeeecCCchhhhhhhhhhccCCcchHHHHHHHHH
Q 018902 100 DSWKTQEFSGKKKDGVQLQLECLG-EEHVAYRRLDFPTLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMDESAKRIYK 178 (349)
Q Consensus 100 D~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~l~~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~ 178 (349)
|.... +...+.... ........++..++.+.++++...... .+ .-..+++.|+.+
T Consensus 81 D~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~-------------~~-~~~~~ql~wL~~ 136 (240)
T cd07402 81 DDRAA----------MRAVFPELPPAPGFVQYVVDLGGWRLILLDSSVPGQH-------------GG-ELCAAQLDWLEA 136 (240)
T ss_pred CCHHH----------HHHhhccccccccccceeEecCCEEEEEEeCCCCCCc-------------CC-EECHHHHHHHHH
Confidence 97421 122221110 000111223445555555544211000 01 112235677777
Q ss_pred HHhCCCCCCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCC-CccEEEeCccCCCcccCCcc
Q 018902 179 VALGTPDDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKL-CIPLVVFGHMHKELAYGNGL 257 (349)
Q Consensus 179 ~l~~~~~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~-~~~lvl~GH~H~~~~~~~g~ 257 (349)
.+.+.+ ++++|+++|+||...+.. +.......+ .+.+.++++ ++ +++++++||+|... .
T Consensus 137 ~L~~~~-~~~~il~~H~pp~~~~~~--------~~~~~~~~~----~~~~~~~l~--~~~~v~~v~~GH~H~~~-----~ 196 (240)
T cd07402 137 ALAEAP-DKPTLVFLHHPPFPVGIA--------WMDAIGLRN----AEALAAVLA--RHPNVRAILCGHVHRPI-----D 196 (240)
T ss_pred HHHhCC-CCCEEEEECCCCccCCch--------hhhhhhCCC----HHHHHHHHh--cCCCeeEEEECCcCchH-----H
Confidence 777765 678999999999765221 100000011 255666666 45 79999999999972 2
Q ss_pred eEEEEEcCCceEEEeeccc
Q 018902 258 RKMIVVGADSTIYLNGAIV 276 (349)
Q Consensus 258 ~~~~~~~~~gt~yvn~g~~ 276 (349)
.+. +|+.|+++|++
T Consensus 197 ~~~-----~g~~~~~~gs~ 210 (240)
T cd07402 197 GSW-----GGIPLLTAPST 210 (240)
T ss_pred eEE-----CCEEEEEcCcc
Confidence 234 67888888775
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa |
| >PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.8e-20 Score=161.56 Aligned_cols=206 Identities=20% Similarity=0.283 Sum_probs=117.3
Q ss_pred cEEEEEeCCCCCcCh-HHHHHHhhCCCCCEEEEcCCCCCC------cH--------------------------HHHHHH
Q 018902 39 VRIVIVGDVHDDWDL-QEDSKALQLLKPDLVLFTGDFGNE------NV--------------------------EIVQSV 85 (349)
Q Consensus 39 mril~iSDlH~~~~~-~~~~~~i~~~~pD~vI~~GDl~~~------~~--------------------------~~l~~l 85 (349)
-||+.+||.|+.... ++++..+....||+|+++||+... .. .+++.|
T Consensus 6 ~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~L 85 (255)
T PF14582_consen 6 RKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRIL 85 (255)
T ss_dssp -EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHHH
T ss_pred hhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHHH
Confidence 489999999999775 778888888899999999999742 11 467788
Q ss_pred HcCCCCEEEEcCCCCCCccccccccchhHHHHHHHH----hC--CcceeeEEeecC-CceEEEeCCeeeecCCchhhhhh
Q 018902 86 AELEFPKAVILGNHDSWKTQEFSGKKKDGVQLQLEC----LG--EEHVAYRRLDFP-TLKLSIVGGRPFSCGGQQIFRKR 158 (349)
Q Consensus 86 ~~l~~Pi~~V~GNHD~~~~~~~~~~~~~~~~~~l~~----~~--~~~~~~~~l~~~-~~~i~~~g~~~~~~~g~~~~~~~ 158 (349)
..+++|+++||||||.+... .+++.+.. .+ +.+-++ ...+ .+.+.+.||.- +.+...
T Consensus 86 ~~~~~p~~~vPG~~Dap~~~--------~lr~a~~~e~v~p~~~~vH~sf--~~~~g~y~v~G~GGeI--~~~~~~---- 149 (255)
T PF14582_consen 86 GELGVPVFVVPGNMDAPERF--------FLREAYNAEIVTPHIHNVHESF--FFWKGEYLVAGMGGEI--TDDQRE---- 149 (255)
T ss_dssp HCC-SEEEEE--TTS-SHHH--------HHHHHHHCCCC-TTEEE-CTCE--EEETTTEEEEEE-SEE--ESSS-B----
T ss_pred HhcCCcEEEecCCCCchHHH--------HHHHHhccceeccceeeeeeee--cccCCcEEEEecCccc--cCCCcc----
Confidence 88899999999999986431 12222220 00 011111 1123 35566666631 111100
Q ss_pred hhhhccCCcchHHHHHHHHHHHhCCCCCCeEEEEeccCC-CCCCCCCCCCCCCCCCCCCCCC-CCHHHHHHHHHHHHhcC
Q 018902 159 LLSVRYGVQDMDESAKRIYKVALGTPDDHLVILLAHNGP-SGLGSEPNDICGKDWGFGGGDH-GDPDLAQAISLLKETTK 236 (349)
Q Consensus 159 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~Ilv~H~PP-~~~g~~~~~~~~~d~~~~~~~~-G~~~~~~al~~l~~~~~ 236 (349)
..+.+....+..+...+.+.+.. +.++|++.|.|| ... +..| || +++..+++ .
T Consensus 150 ---~~~~LrYP~weaey~lk~l~elk-~~r~IlLfhtpPd~~k---------------g~~h~GS----~~V~dlIk--~ 204 (255)
T PF14582_consen 150 ---EEFKLRYPAWEAEYSLKFLRELK-DYRKILLFHTPPDLHK---------------GLIHVGS----AAVRDLIK--T 204 (255)
T ss_dssp ---CSSS-EEEHHHHHHHHGGGGGCT-SSEEEEEESS-BTBCT---------------CTBTTSB----HHHHHHHH--H
T ss_pred ---ccccccchHHHHHHHHHHHHhcc-cccEEEEEecCCccCC---------------CcccccH----HHHHHHHH--h
Confidence 01112222233344445555554 457999999999 221 2234 88 77788888 4
Q ss_pred CCccEEEeCccCCCcccCCcceEEEEEcCCceEEEeecccceeeccCCccCCCCCcccccccccCCCCCCceeeEEEEEE
Q 018902 237 LCIPLVVFGHMHKELAYGNGLRKMIVVGADSTIYLNGAIVPRVKRLIDEQGADSSSVSNKTSFLRPDSKGTVRAFTVVEI 316 (349)
Q Consensus 237 ~~~~lvl~GH~H~~~~~~~g~~~~~~~~~~gt~yvn~g~~pr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~v~i 316 (349)
++|++|+|||+|.. .+..++ +.|++||||+.- + ..|++|++
T Consensus 205 ~~P~ivl~Ghihe~----~~~e~l-----G~TlVVNPGsL~-----------------------------~-G~yAvI~l 245 (255)
T PF14582_consen 205 YNPDIVLCGHIHES----HGKESL-----GKTLVVNPGSLA-----------------------------E-GDYAVIDL 245 (255)
T ss_dssp H--SEEEE-SSS-E----E--EEE-----TTEEEEE--BGG-----------------------------G-TEEEEEET
T ss_pred cCCcEEEecccccc----hhhHHh-----CCEEEecCcccc-----------------------------c-CceeEEEe
Confidence 57999999999999 677788 899999999862 2 47999999
Q ss_pred eCCeEeEE
Q 018902 317 LDGRIDKI 324 (349)
Q Consensus 317 ~~~~v~~~ 324 (349)
.+.+|...
T Consensus 246 ~~~~v~~g 253 (255)
T PF14582_consen 246 EQDKVEFG 253 (255)
T ss_dssp TTTEEEEE
T ss_pred cccccccC
Confidence 99988653
|
|
| >TIGR03729 acc_ester putative phosphoesterase | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.6e-19 Score=163.42 Aligned_cols=208 Identities=20% Similarity=0.221 Sum_probs=111.9
Q ss_pred EEEEEeCCCCCcCh-------HHHHHHhhCCCCCEEEEcCCCCCCc---HHHHHHHHc-CCCCEEEEcCCCCCCcccccc
Q 018902 40 RIVIVGDVHDDWDL-------QEDSKALQLLKPDLVLFTGDFGNEN---VEIVQSVAE-LEFPKAVILGNHDSWKTQEFS 108 (349)
Q Consensus 40 ril~iSDlH~~~~~-------~~~~~~i~~~~pD~vI~~GDl~~~~---~~~l~~l~~-l~~Pi~~V~GNHD~~~~~~~~ 108 (349)
||+++||+|++... +++++.+++.++|+||++|||++.. .++++.+.+ .+.|+++|+||||++.....
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~l~~~~~~pv~~v~GNHD~~~~~~~- 79 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQRSLPFIEKLQELKGIKVTFNAGNHDMLKDLTY- 79 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchhhHHHHHHHHHHhcCCcEEEECCCCCCCCCCCH-
Confidence 69999999975321 3466777778999999999999843 345666665 36899999999998622111
Q ss_pred ccchhHHHHHH--HHhCCcceeeEEeecCCceEEEeCCeeeecC--Cchhhhh---hh-----hhh-c-cCCcc---hHH
Q 018902 109 GKKKDGVQLQL--ECLGEEHVAYRRLDFPTLKLSIVGGRPFSCG--GQQIFRK---RL-----LSV-R-YGVQD---MDE 171 (349)
Q Consensus 109 ~~~~~~~~~~l--~~~~~~~~~~~~l~~~~~~i~~~g~~~~~~~--g~~~~~~---~~-----~~~-~-~~~~~---~~~ 171 (349)
..+.+.+ ..+.+.. ..+...+ +.++|.+.|.-. +...... .. ... . .+... ..+
T Consensus 80 ----~~~~~~~~~~~l~~~~---~~~~~~~--~~~ig~~gw~d~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 150 (239)
T TIGR03729 80 ----EEIESNDSPLYLHNRF---IDIPNTQ--WRIIGNNGWYDYSFSNDKTSKEILRWKKSFWFDRRIKRPMSDPERTAI 150 (239)
T ss_pred ----HHHHhccchhhhcccc---cccCCCc--eEEEeeccceecccccccCHHHHHHhhhcEEeecccCCCCChHHHHHH
Confidence 1111110 0111111 1111133 334444322211 1100000 00 000 0 11111 234
Q ss_pred HHHHHHHHHhCCCCCCeEEEEeccCCCCCCCCCCCCCC-CCCCCCCCCCCCHHHHHHHHHHHHhcCCCccEEEeCccCCC
Q 018902 172 SAKRIYKVALGTPDDHLVILLAHNGPSGLGSEPNDICG-KDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKE 250 (349)
Q Consensus 172 ~~~~l~~~l~~~~~~~~~Ilv~H~PP~~~g~~~~~~~~-~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~ 250 (349)
++.++.+.+++.. ++++|+++|+||....-. ..++ ..|.......|+. .+.++++ ++++++|+|||+|..
T Consensus 151 ~l~~l~~~l~~~~-~~~~ivvtH~pP~~~~~~--~~~~~~~~~~~~~~~~s~----~l~~li~--~~~v~~~i~GH~H~~ 221 (239)
T TIGR03729 151 VLKQLKKQLNQLD-NKQVIFVTHFVPHRDFIY--VPMDHRRFDMFNAFLGSQ----HFGQLLV--KYEIKDVIFGHLHRR 221 (239)
T ss_pred HHHHHHHHHHhcC-CCCEEEEEcccchHHHhc--CCCCCcchhhhhhccChH----HHHHHHH--HhCCCEEEECCccCC
Confidence 5677777776654 467999999999642110 0011 1232222233554 4455555 347999999999998
Q ss_pred cccCCcceEEEEEcCCceEEEeecc
Q 018902 251 LAYGNGLRKMIVVGADSTIYLNGAI 275 (349)
Q Consensus 251 ~~~~~g~~~~~~~~~~gt~yvn~g~ 275 (349)
. ...++ +++.|+|...
T Consensus 222 ~----~~~~i-----~~~~~~~~~~ 237 (239)
T TIGR03729 222 F----GPLTI-----GGTTYHNRPL 237 (239)
T ss_pred C----CCEEE-----CCEEEEecCC
Confidence 3 22344 7888888753
|
Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system. |
| >cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.1e-19 Score=162.14 Aligned_cols=224 Identities=17% Similarity=0.189 Sum_probs=128.4
Q ss_pred cEEEEEeCCCCCcC--------------hHHHHHHhhCCCCCEEEEcCCCCCCcH--------HHHHHHHcCCCCEEEEc
Q 018902 39 VRIVIVGDVHDDWD--------------LQEDSKALQLLKPDLVLFTGDFGNENV--------EIVQSVAELEFPKAVIL 96 (349)
Q Consensus 39 mril~iSDlH~~~~--------------~~~~~~~i~~~~pD~vI~~GDl~~~~~--------~~l~~l~~l~~Pi~~V~ 96 (349)
+||+++||+|.... .++.++.+++.+||+||++||+++... .+.+.+.++++|+++++
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v~ 80 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHVL 80 (267)
T ss_pred CeEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEec
Confidence 68999999996542 145677888889999999999997432 24556667789999999
Q ss_pred CCCCCCccccccccchhHHH-HHHHHhCCcceeeEEeecCCceEEEeCCeeeecCCchhhh--------hh---hh----
Q 018902 97 GNHDSWKTQEFSGKKKDGVQ-LQLECLGEEHVAYRRLDFPTLKLSIVGGRPFSCGGQQIFR--------KR---LL---- 160 (349)
Q Consensus 97 GNHD~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~l~~~~~~i~~~g~~~~~~~g~~~~~--------~~---~~---- 160 (349)
||||....... ... ......+..+. .....++.+.++.+......+..... .. .+
T Consensus 81 GNHD~~~~~~~------~~~~~~~~~~~~~yy---sf~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (267)
T cd07396 81 GNHDLYNPSRE------YLLLYTLLGLGAPYY---SFSPGGIRFIVLDGYDISALGRPEDTPKAENADDNSNLGLYLSEP 151 (267)
T ss_pred CccccccccHh------hhhcccccCCCCceE---EEecCCcEEEEEeCCccccccCCCCChhhhhHHHhchhhhhccCc
Confidence 99998643210 010 00011222222 22335566666665333222110000 00 00
Q ss_pred -hhccCCcchHHHHHHHHHHHhCCC-CCCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 018902 161 -SVRYGVQDMDESAKRIYKVALGTP-DDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLC 238 (349)
Q Consensus 161 -~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~ 238 (349)
...+...--.+++.|+.+.++... ..++.|+++|+||...+.. +. ...+. .+.+.+++++. .+
T Consensus 152 ~~~~~~G~l~~~Ql~WL~~~L~~~~~~~~~viV~~Hhp~~~~~~~-------~~---~~~~~----~~~~~~ll~~~-~~ 216 (267)
T cd07396 152 RFVDWNGGIGEEQLQWLRNELQEADANGEKVIIFSHFPLHPESTS-------PH---GLLWN----HEEVLSILRAY-GC 216 (267)
T ss_pred cceeccCcCCHHHHHHHHHHHHHHHhcCCeEEEEEeccCCCCCCC-------cc---ccccC----HHHHHHHHHhC-CC
Confidence 000000112356778888777654 3467899999988543210 00 00111 24456666632 37
Q ss_pred ccEEEeCccCCCcccCCcceEEEEEcCCceEEEeecccceeeccCCccCCCCCcccccccccCCCCCCceeeEEEEEEeC
Q 018902 239 IPLVVFGHMHKELAYGNGLRKMIVVGADSTIYLNGAIVPRVKRLIDEQGADSSSVSNKTSFLRPDSKGTVRAFTVVEILD 318 (349)
Q Consensus 239 ~~lvl~GH~H~~~~~~~g~~~~~~~~~~gt~yvn~g~~pr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~v~i~~ 318 (349)
+++|++||+|.... ... +|+.|+..++.-.-. .+...|.+|++-+
T Consensus 217 V~~v~~GH~H~~~~-----~~~-----~gi~~~~~~a~~~~~-------------------------~~~~~~~~~~~~~ 261 (267)
T cd07396 217 VKACISGHDHEGGY-----AQR-----HGIHFLTLEGMVETP-------------------------PESNAFGVVIVYE 261 (267)
T ss_pred EEEEEcCCcCCCCc-----ccc-----CCeeEEEechhhcCC-------------------------CCCCceEEEEEeC
Confidence 99999999999832 122 677777777642211 3346899999977
Q ss_pred CeE
Q 018902 319 GRI 321 (349)
Q Consensus 319 ~~v 321 (349)
+++
T Consensus 262 ~~~ 264 (267)
T cd07396 262 DRL 264 (267)
T ss_pred Cce
Confidence 765
|
Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >PRK11340 phosphodiesterase YaeI; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.1e-19 Score=164.28 Aligned_cols=158 Identities=22% Similarity=0.228 Sum_probs=96.7
Q ss_pred CCccEEEEEeCCCCCcC-----hHHHHHHhhCCCCCEEEEcCCCCCC--c---HHHHHHHHcC--CCCEEEEcCCCCCCc
Q 018902 36 ASVVRIVIVGDVHDDWD-----LQEDSKALQLLKPDLVLFTGDFGNE--N---VEIVQSVAEL--EFPKAVILGNHDSWK 103 (349)
Q Consensus 36 ~~~mril~iSDlH~~~~-----~~~~~~~i~~~~pD~vI~~GDl~~~--~---~~~l~~l~~l--~~Pi~~V~GNHD~~~ 103 (349)
.++|||+++||+|.+.. .+++++.+++.+||+|+++||+++. . .++.+.|.++ ..|+|+|+||||++.
T Consensus 47 ~~~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~~~pv~~V~GNHD~~~ 126 (271)
T PRK11340 47 AAPFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSPLAECAPTFACFGNHDRPV 126 (271)
T ss_pred CCCcEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCccccHHHHHHHHHHHhhcCCEEEecCCCCccc
Confidence 35699999999999743 2556777888899999999999872 1 2333333333 479999999999853
Q ss_pred cccccccchhHHHHHHHHhCCcceeeEEeecCCceEEEeCCeeeecCCchhhhhhhhhhccCCcchHHHHHHHHHHHhCC
Q 018902 104 TQEFSGKKKDGVQLQLECLGEEHVAYRRLDFPTLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMDESAKRIYKVALGT 183 (349)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 183 (349)
... ....+.+.++..+ +..+.++...+. .++..+.+.|..... .+..+. .+.+
T Consensus 127 ~~~----~~~~~~~~l~~~g-----i~lL~n~~~~i~-~~~~~i~i~G~~d~~-------~~~~~~-------~~~~--- 179 (271)
T PRK11340 127 GTE----KNHLIGETLKSAG-----ITVLFNQATVIA-TPNRQFELVGTGDLW-------AGQCKP-------PPAS--- 179 (271)
T ss_pred Ccc----chHHHHHHHHhcC-----cEEeeCCeEEEe-eCCcEEEEEEecchh-------ccCCCh-------hHhc---
Confidence 211 1122444554433 345666655555 455556655543211 111110 1111
Q ss_pred CCCCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCccEEEeCccCCCcc
Q 018902 184 PDDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKELA 252 (349)
Q Consensus 184 ~~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~~ 252 (349)
.++.++|+++|.|-. +.... +.++|+++|||||..|.
T Consensus 180 ~~~~~~IlL~H~P~~-----------------------------~~~~~---~~~~dL~lsGHTHGGQi 216 (271)
T PRK11340 180 EANLPRLVLAHNPDS-----------------------------KEVMR---DEPWDLMLCGHTHGGQL 216 (271)
T ss_pred CCCCCeEEEEcCCCh-----------------------------hHhhc---cCCCCEEEeccccCCeE
Confidence 235689999999621 11121 35799999999999764
|
|
| >cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.2e-18 Score=154.11 Aligned_cols=199 Identities=19% Similarity=0.191 Sum_probs=104.5
Q ss_pred EEEEeCCCCCc--------Ch---HHHHHHhhCC------CCCEEEEcCCCCCCc-----HHHHHHHHcCCCCEEEEcCC
Q 018902 41 IVIVGDVHDDW--------DL---QEDSKALQLL------KPDLVLFTGDFGNEN-----VEIVQSVAELEFPKAVILGN 98 (349)
Q Consensus 41 il~iSDlH~~~--------~~---~~~~~~i~~~------~pD~vI~~GDl~~~~-----~~~l~~l~~l~~Pi~~V~GN 98 (349)
|.++||+|... .. ++.++.+.+. +||+||++|||++.. .+.++.|.+++.|+|+|+||
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~~~~~~~~l~~l~~l~~~v~~V~GN 80 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMKLEEAKLDLAWIDALPGTKVLLKGN 80 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCChHHHHHHHHHHHhCCCCeEEEeCC
Confidence 57899999883 22 3444444433 999999999999642 24555666667789999999
Q ss_pred CCCCccccccccchhHHHHHHHHhCCcceeeEEeecCCceEEEeCCeeeecCCchhhh-hhhhhhccCCcchHHHHHHHH
Q 018902 99 HDSWKTQEFSGKKKDGVQLQLECLGEEHVAYRRLDFPTLKLSIVGGRPFSCGGQQIFR-KRLLSVRYGVQDMDESAKRIY 177 (349)
Q Consensus 99 HD~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~g~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~l~ 177 (349)
||++.. ....+++.+...+.....-.....+. +.++|.+.+...+..+.. .+.........-...++.|+.
T Consensus 81 HD~~~~------~~~~~~~~l~~~~~~~~~n~~~~~~~--i~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 152 (232)
T cd07393 81 HDYWWG------SASKLRKALEESRLALLFNNAYIDDD--VAICGTRGWDNPGNPWPPINETLKVEEDEKIFERELERLE 152 (232)
T ss_pred ccccCC------CHHHHHHHHHhcCeEEeccCcEEECC--EEEEEEEeeCCCCCccccccccccchhHHHHHHHHHHHHH
Confidence 998421 12234444443221100000111122 344444333322211100 000000001111233456666
Q ss_pred HHHhCCCC---CCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCccEEEeCccCCCcccC
Q 018902 178 KVALGTPD---DHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKELAYG 254 (349)
Q Consensus 178 ~~l~~~~~---~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~~~~ 254 (349)
+.+++.+. ..++|+++|+||+..+ .+. ..+..+++ +++++++++||+|......
T Consensus 153 ~~L~~~~~~~~~~~~i~~~H~p~~~~~-----------------~~~----~~~~~~~~--~~~v~~vl~GH~H~~~~~~ 209 (232)
T cd07393 153 LSLKAAKKREKEKIKIVMLHYPPANEN-----------------GDD----SPISKLIE--EYGVDICVYGHLHGVGRDR 209 (232)
T ss_pred HHHHHHHhCCCCCCEEEEECCCCcCCC-----------------CCH----HHHHHHHH--HcCCCEEEECCCCCCcccc
Confidence 66665432 2469999999986541 112 23445555 3479999999999984311
Q ss_pred CcceEEEEEcCCceEEEeecc
Q 018902 255 NGLRKMIVVGADSTIYLNGAI 275 (349)
Q Consensus 255 ~g~~~~~~~~~~gt~yvn~g~ 275 (349)
.-.... +|+.|+++.+
T Consensus 210 ~~~~~~-----~gi~~~~~~~ 225 (232)
T cd07393 210 AINGER-----GGIRYQLVSA 225 (232)
T ss_pred cccceE-----CCEEEEEEcc
Confidence 000112 6777766654
|
DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat |
| >TIGR00040 yfcE phosphoesterase, MJ0936 family | Back alignment and domain information |
|---|
Probab=99.79 E-value=6.2e-18 Score=143.28 Aligned_cols=61 Identities=21% Similarity=0.401 Sum_probs=49.6
Q ss_pred cEEEEEeCCCCCcCh-HHHHHHhhCC-CCCEEEEcCCCCCCcHHHHHHHHcCCCCEEEEcCCCCC
Q 018902 39 VRIVIVGDVHDDWDL-QEDSKALQLL-KPDLVLFTGDFGNENVEIVQSVAELEFPKAVILGNHDS 101 (349)
Q Consensus 39 mril~iSDlH~~~~~-~~~~~~i~~~-~pD~vI~~GDl~~~~~~~l~~l~~l~~Pi~~V~GNHD~ 101 (349)
|||+++||+|..... +...+.++.. ++|.|+++||+++ .++++.+.++..|+++|+||||.
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~--~~~~~~l~~~~~~~~~V~GN~D~ 63 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLTS--PFVLKEFEDLAAKVIAVRGNNDG 63 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCCC--HHHHHHHHHhCCceEEEccCCCc
Confidence 799999999987654 4455666666 8999999999984 46677777767789999999996
|
Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required. |
| >cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.1e-18 Score=158.10 Aligned_cols=212 Identities=14% Similarity=0.108 Sum_probs=119.4
Q ss_pred CCccEEEEEeCCCCC-cChHHHHHHhhC--CCCCEEEEcCCCCCC--c------HHHHHHHHcC--CCCEEEEcCCCCCC
Q 018902 36 ASVVRIVIVGDVHDD-WDLQEDSKALQL--LKPDLVLFTGDFGNE--N------VEIVQSVAEL--EFPKAVILGNHDSW 102 (349)
Q Consensus 36 ~~~mril~iSDlH~~-~~~~~~~~~i~~--~~pD~vI~~GDl~~~--~------~~~l~~l~~l--~~Pi~~V~GNHD~~ 102 (349)
..++||+++||+|.+ ....+.++.+.+ .+||+||++||++.. . ..+.+.+..+ .+|+++++||||..
T Consensus 2 ~~~~~f~v~gD~~~~~~~~~~~~~~l~~~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 81 (294)
T cd00839 2 DTPFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYVPYMVTPGNHEAD 81 (294)
T ss_pred CCcEEEEEEEECCCCCCCcHHHHHHHHhccCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcCCcEEcCcccccc
Confidence 357899999999974 333556666655 799999999999842 1 2344444433 68999999999987
Q ss_pred ccccccccchhHHHHHHHHhCC--cceeeEEeecCCceEEEeCCeeeecCCchhhhhhhhhhccCCcchHHHHHHHHHHH
Q 018902 103 KTQEFSGKKKDGVQLQLECLGE--EHVAYRRLDFPTLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMDESAKRIYKVA 180 (349)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~l~~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 180 (349)
................+..... ..-.+...+...+.+.++++..... ......++++|+.+.|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~---------------~~~~~~~q~~WL~~~L 146 (294)
T cd00839 82 YNFSFYKIKAFFPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDFY---------------GDGPGSPQYDWLEADL 146 (294)
T ss_pred cCCCCcccccccccccccCCCCCCCCCceEEEeeCCEEEEEEecccccc---------------cCCCCcHHHHHHHHHH
Confidence 5432110000000000000000 0011222334555555555432110 0011234567787777
Q ss_pred hCCCCC--CeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCccEEEeCccCCCcccCC---
Q 018902 181 LGTPDD--HLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKELAYGN--- 255 (349)
Q Consensus 181 ~~~~~~--~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~~~~~--- 255 (349)
++.++. +++|+++|+|++..+.... .| ....+.++++..+++ +++++++++||+|..++...
T Consensus 147 ~~~~~~~~~~~iv~~H~P~~~~~~~~~-~~----------~~~~~~~~~l~~ll~--~~~v~~vl~GH~H~y~r~~p~~~ 213 (294)
T cd00839 147 AKVDRSKTPWIIVMGHRPMYCSNTDHD-DC----------IEGEKMRAALEDLFY--KYGVDLVLSGHVHAYERTCPVYN 213 (294)
T ss_pred HHhcccCCCeEEEEeccCcEecCcccc-cc----------chhHHHHHHHHHHHH--HhCCCEEEEccceeeEeechhhC
Confidence 766442 4589999998865422110 00 112566788888888 56799999999999854321
Q ss_pred cc---eEEEEEcCCceEEEeecc
Q 018902 256 GL---RKMIVVGADSTIYLNGAI 275 (349)
Q Consensus 256 g~---~~~~~~~~~gt~yvn~g~ 275 (349)
+. ......+++|++|+-.|+
T Consensus 214 ~~~~~~~~~~~~~~g~~yiv~G~ 236 (294)
T cd00839 214 GTVVGDCNPYSNPKGPVHIVIGA 236 (294)
T ss_pred CEeccccccccCCCccEEEEECC
Confidence 00 000123446889987765
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver |
| >TIGR00583 mre11 DNA repair protein (mre11) | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.2e-17 Score=158.61 Aligned_cols=242 Identities=17% Similarity=0.166 Sum_probs=126.5
Q ss_pred CccEEEEEeCCCCCcCh-------------HHHHHHhhCCCCCEEEEcCCCCCCc-------HHHHHHHHc---------
Q 018902 37 SVVRIVIVGDVHDDWDL-------------QEDSKALQLLKPDLVLFTGDFGNEN-------VEIVQSVAE--------- 87 (349)
Q Consensus 37 ~~mril~iSDlH~~~~~-------------~~~~~~i~~~~pD~vI~~GDl~~~~-------~~~l~~l~~--------- 87 (349)
++|||+|+||+|++... +++++.+...++|+||++|||+|.. .++++.|++
T Consensus 2 ~~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p~~ 81 (405)
T TIGR00583 2 DTIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKPCE 81 (405)
T ss_pred CceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCCccc
Confidence 67999999999997421 4566777788999999999999852 123333332
Q ss_pred ---------------------------CCCCEEEEcCCCCCCccccccccchhHHHHHHHHhCCcceeeEEeecCCceE-
Q 018902 88 ---------------------------LEFPKAVILGNHDSWKTQEFSGKKKDGVQLQLECLGEEHVAYRRLDFPTLKL- 139 (349)
Q Consensus 88 ---------------------------l~~Pi~~V~GNHD~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i- 139 (349)
..+|+|+|.||||....... ......+...|...+-......+.+.+
T Consensus 82 ~~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~~~~~-----~~~l~lL~~~Glvnifgk~~~~~~i~~~ 156 (405)
T TIGR00583 82 LEFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPSGDGL-----LCALDLLHATGLVNYFGKVPEIDNIIVS 156 (405)
T ss_pred hhhccchhhhcccccccccccccccccCCCCEEEEcCCCCCcccccc-----ccHHHHHHhCCCEEEeccccccccceee
Confidence 46899999999998653210 113334444332111000001111111
Q ss_pred --EE-eCCeeeecCCchhhhhhhhhhccCCcchHHHHHHHHHHHhC-CCCCCeEEEEeccCCCCCCCCCCCCCCCCCCCC
Q 018902 140 --SI-VGGRPFSCGGQQIFRKRLLSVRYGVQDMDESAKRIYKVALG-TPDDHLVILLAHNGPSGLGSEPNDICGKDWGFG 215 (349)
Q Consensus 140 --~~-~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~ 215 (349)
.+ -|+....+.|......+.....+... .+.....+ .+.+.++|++.|+.-.+....
T Consensus 157 Pvll~kg~~~valyGl~~~~d~rl~~~f~~~-------~v~~~~p~~~~~~~fnIlv~Hq~~~~~~~~------------ 217 (405)
T TIGR00583 157 PILLQKGETKLALYGISNVRDERLVRTFKDN-------KVSFLRPNAGAEDWFNLLVLHQNHAAHTST------------ 217 (405)
T ss_pred eEEEecCCeeEEEecCCCCCHHHHHHHhhcc-------chhhhccccCCCCceEEEEeCceecCCCCc------------
Confidence 11 13333333333221111000001100 00000011 123568999999953211000
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCCccEEEeCccCCCcccCCcceEEEEEcCCceEEEeecccceeeccCCccCCCCCcccc
Q 018902 216 GGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKELAYGNGLRKMIVVGADSTIYLNGAIVPRVKRLIDEQGADSSSVSN 295 (349)
Q Consensus 216 ~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~~~~~g~~~~~~~~~~gt~yvn~g~~pr~~~~~~~~~~~~~~~~~ 295 (349)
.+ .-..++. ..+|||+.||.|..+..... . ..++..+++||+..+....++.
T Consensus 218 --~~-------ipe~llp---~~fDYValGHiH~~~~~p~~---~---~~~~~~V~ypGS~v~tSf~e~E---------- 269 (405)
T TIGR00583 218 --SF-------LPESFIP---DFFDLVIWGHEHECLPDPVY---N---PSDGFYVLQPGSTVATSLTPGE---------- 269 (405)
T ss_pred --cc-------Cchhhhh---ccCcEEEecccccccccccc---c---CCCCceEEECCCcccccccccc----------
Confidence 01 0122332 35999999999997432211 0 0134567889997665554421
Q ss_pred cccccCCCCCCceeeEEEEEEeCCeEeEEEEEeeeecCCcceeEEEeee
Q 018902 296 KTSFLRPDSKGTVRAFTVVEILDGRIDKIAERWIIVVGDTTTLQEEHIL 344 (349)
Q Consensus 296 ~~~~~~~~~~~~~~~f~~v~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 344 (349)
..+++|.+|+|++++++.+..-. .+.+++...++-
T Consensus 270 ----------~~~Kgv~lVeI~~~~~~~~~IpL----~~vRpf~~~~i~ 304 (405)
T TIGR00583 270 ----------ALPKHVFILNIKGRKFASKPIPL----QTVRPFVMKEIL 304 (405)
T ss_pred ----------cCCCEEEEEEEcCCeeEEEEeeC----CCcccEEEEEEE
Confidence 35789999999988765533222 234566665553
|
All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria. |
| >PLN02533 probable purple acid phosphatase | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.1e-17 Score=162.74 Aligned_cols=206 Identities=15% Similarity=0.170 Sum_probs=121.0
Q ss_pred CccEEEEEeCCCCCcChHHHHHHhhCCCCCEEEEcCCCCCCc---------HHHHHHHHcCCCCEEEEcCCCCCCccccc
Q 018902 37 SVVRIVIVGDVHDDWDLQEDSKALQLLKPDLVLFTGDFGNEN---------VEIVQSVAELEFPKAVILGNHDSWKTQEF 107 (349)
Q Consensus 37 ~~mril~iSDlH~~~~~~~~~~~i~~~~pD~vI~~GDl~~~~---------~~~l~~l~~l~~Pi~~V~GNHD~~~~~~~ 107 (349)
.++||+++||+|........++.+++.+||+||++|||+... .+.++.+.. .+|+++++||||.......
T Consensus 138 ~~~~f~v~GDlG~~~~~~~tl~~i~~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s-~~P~m~~~GNHE~~~~~~~ 216 (427)
T PLN02533 138 FPIKFAVSGDLGTSEWTKSTLEHVSKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPLAS-QRPWMVTHGNHELEKIPIL 216 (427)
T ss_pred CCeEEEEEEeCCCCcccHHHHHHHHhcCCCEEEEcCccccccchHHHHHHHHHHhhhHhh-cCceEEeCccccccccccc
Confidence 579999999998765556678888888999999999998531 123333332 6899999999998642111
Q ss_pred cccchhHHHHHHHHh----CCcceeeEEeecCCceEEEeCCeeeecCCchhhhhhhhhhccCCcchHHHHHHHHHHHhCC
Q 018902 108 SGKKKDGVQLQLECL----GEEHVAYRRLDFPTLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMDESAKRIYKVALGT 183 (349)
Q Consensus 108 ~~~~~~~~~~~l~~~----~~~~~~~~~l~~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 183 (349)
.......+...+... +...-.|...+...+.+..+++.. . + ....++.+||.+.|++.
T Consensus 217 ~~~~f~~y~~rf~mP~~~~g~~~~~yYSfd~g~vhfI~Lds~~---~-------------~--~~~~~Q~~WLe~dL~~~ 278 (427)
T PLN02533 217 HPEKFTAYNARWRMPFEESGSTSNLYYSFNVYGVHIIMLGSYT---D-------------F--EPGSEQYQWLENNLKKI 278 (427)
T ss_pred cCcCccchhhcccCCccccCCCCCceEEEEECCEEEEEEeCCc---c-------------c--cCchHHHHHHHHHHHhh
Confidence 000011122211111 100011222333445555444321 0 1 11235678888888776
Q ss_pred CC--CCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCccEEEeCccCCCcccCCcceEEE
Q 018902 184 PD--DHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKELAYGNGLRKMI 261 (349)
Q Consensus 184 ~~--~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~~~~~g~~~~~ 261 (349)
++ ..++|+++|+|++..+....+ ..-...+++.+..+++ ++++|++++||+|...+...-...
T Consensus 279 ~r~~~pwiIv~~H~P~y~s~~~~~~-----------~~~~~~~r~~le~Ll~--~~~VdlvlsGH~H~YeR~~p~~~~-- 343 (427)
T PLN02533 279 DRKTTPWVVAVVHAPWYNSNEAHQG-----------EKESVGMKESMETLLY--KARVDLVFAGHVHAYERFDRVYQG-- 343 (427)
T ss_pred cccCCCEEEEEeCCCeeecccccCC-----------cchhHHHHHHHHHHHH--HhCCcEEEecceecccccccccCC--
Confidence 53 245789999998765321100 0001345678888888 567999999999988543211000
Q ss_pred EEcCCceEEEeeccc
Q 018902 262 VVGADSTIYLNGAIV 276 (349)
Q Consensus 262 ~~~~~gt~yvn~g~~ 276 (349)
.+++.|++||..|..
T Consensus 344 ~~~~~gpvyiv~G~g 358 (427)
T PLN02533 344 KTDKCGPVYITIGDG 358 (427)
T ss_pred ccCCCCCEEEEeCCC
Confidence 124468999988764
|
|
| >cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.78 E-value=7.8e-18 Score=153.77 Aligned_cols=182 Identities=19% Similarity=0.204 Sum_probs=104.9
Q ss_pred EEEEeCCCCCcCh--------HHHHHHhhCCCCCEEEEcCCCCCCcH--------------HHHHHHHc---C-CCCEEE
Q 018902 41 IVIVGDVHDDWDL--------QEDSKALQLLKPDLVLFTGDFGNENV--------------EIVQSVAE---L-EFPKAV 94 (349)
Q Consensus 41 il~iSDlH~~~~~--------~~~~~~i~~~~pD~vI~~GDl~~~~~--------------~~l~~l~~---l-~~Pi~~ 94 (349)
|+++||+|++... +.+++.++..+||+||++||++|... .+++.+.. + +.|++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 7999999998652 12456777889999999999997421 33444432 2 479999
Q ss_pred EcCCCCCCccccccccchhHHHHHHHHhCCcceeeE-EeecCCceEEEeCCeeeecCCch-hhhhhhhhhccCCcchHHH
Q 018902 95 ILGNHDSWKTQEFSGKKKDGVQLQLECLGEEHVAYR-RLDFPTLKLSIVGGRPFSCGGQQ-IFRKRLLSVRYGVQDMDES 172 (349)
Q Consensus 95 V~GNHD~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~l~~~~~~i~~~g~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~ 172 (349)
|+||||.+....... ....++++....+.....+. ....+++.+.++++..+ .+.. .+ ...+. -..++
T Consensus 82 v~GNHD~~~~~~~~~-~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~I~Ldt~~~--~~~~~~~------~~~g~-l~~~q 151 (256)
T cd07401 82 IRGNHDLFNIPSLDS-ENNYYRKYSATGRDGSFSFSHTTRFGNYSFIGVDPTLF--PGPKRPF------NFFGS-LDKKL 151 (256)
T ss_pred eCCCCCcCCCCCccc-hhhHHHHhheecCCCccceEEEecCCCEEEEEEcCccC--CCCCCCC------ceecc-CCHHH
Confidence 999999965432211 11223333322222211111 11235556666665321 1100 00 00111 11355
Q ss_pred HHHHHHHHhCCCCCCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCccEEEeCccCCCc
Q 018902 173 AKRIYKVALGTPDDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKEL 251 (349)
Q Consensus 173 ~~~l~~~l~~~~~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~ 251 (349)
++|+.+.+++.+..+++||++|+|+...... . ...... +.++++ ++++++++|||+|...
T Consensus 152 l~wL~~~L~~~~~~~~~IV~~HhP~~~~~~~--------~--------~~~~~~-~~~ll~--~~~v~~vl~GH~H~~~ 211 (256)
T cd07401 152 LDRLEKELEKSTNSNYTIWFGHYPTSTIISP--------S--------AKSSSK-FKDLLK--KYNVTAYLCGHLHPLG 211 (256)
T ss_pred HHHHHHHHHhcccCCeEEEEEcccchhccCC--------C--------cchhHH-HHHHHH--hcCCcEEEeCCccCCC
Confidence 6788888877766678999999987432110 0 011112 566676 5679999999999983
|
TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.2e-18 Score=140.52 Aligned_cols=129 Identities=26% Similarity=0.443 Sum_probs=87.3
Q ss_pred EEEEEeCCCCCcChHHHHHHhhCCCCCEEEEcCCCCCCc-----HHHHHHHHcCCCC-EEEEcCCCCCCccccccccchh
Q 018902 40 RIVIVGDVHDDWDLQEDSKALQLLKPDLVLFTGDFGNEN-----VEIVQSVAELEFP-KAVILGNHDSWKTQEFSGKKKD 113 (349)
Q Consensus 40 ril~iSDlH~~~~~~~~~~~i~~~~pD~vI~~GDl~~~~-----~~~l~~l~~l~~P-i~~V~GNHD~~~~~~~~~~~~~ 113 (349)
||+++||+|.... .++..++|+||++||+++.. .++++.+.+++.| +++|+||||.+..
T Consensus 1 ~i~~isD~H~~~~------~~~~~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~~~~~~~v~GNHD~~~~--------- 65 (135)
T cd07379 1 RFVCISDTHSRHR------TISIPDGDVLIHAGDLTERGTLEELQKFLDWLKSLPHPHKIVIAGNHDLTLD--------- 65 (135)
T ss_pred CEEEEeCCCCCCC------cCcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhCCCCeEEEEECCCCCcCC---------
Confidence 5899999999866 23457899999999999753 2466677776665 5789999995310
Q ss_pred HHHHHHHHhCCcceeeEEeecCCceEEEeCCeeeecCCchhhhhhhhhhccCCcchHHHHHHHHHHHhCCCCCCeEEEEe
Q 018902 114 GVQLQLECLGEEHVAYRRLDFPTLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMDESAKRIYKVALGTPDDHLVILLA 193 (349)
Q Consensus 114 ~~~~~l~~~~~~~~~~~~l~~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~Ilv~ 193 (349)
.+.++|+++
T Consensus 66 -----------------------------------------------------------------------~~~~~ilv~ 74 (135)
T cd07379 66 -----------------------------------------------------------------------PEDTDILVT 74 (135)
T ss_pred -----------------------------------------------------------------------CCCCEEEEE
Confidence 013479999
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCccEEEeCccCCCcccCCcceEEEEEcCCceEEEee
Q 018902 194 HNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKELAYGNGLRKMIVVGADSTIYLNG 273 (349)
Q Consensus 194 H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~~~~~g~~~~~~~~~~gt~yvn~ 273 (349)
|.||++..... ......|+..+.+.+ + +.+++++++||+|.+ .+.... ....++|.|+|+
T Consensus 75 H~~p~~~~~~~---------~~~~~~g~~~~~~~~----~--~~~~~~~i~GH~H~~----~~~~~~-~~~~~~t~~in~ 134 (135)
T cd07379 75 HGPPYGHLDLV---------SSGQRVGCEELLNRV----Q--RVRPKLHVFGHIHEG----YGAERV-LDTDGETLFVNA 134 (135)
T ss_pred CCCCCcCcccc---------ccCcccCCHHHHHHH----H--HHCCcEEEEcCcCCc----CceeEe-cccCCCEEEEeC
Confidence 99997763211 111123665554444 4 345999999999999 444411 112279999998
Q ss_pred c
Q 018902 274 A 274 (349)
Q Consensus 274 g 274 (349)
+
T Consensus 135 ~ 135 (135)
T cd07379 135 S 135 (135)
T ss_pred C
Confidence 6
|
239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme |
| >cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.8e-17 Score=153.17 Aligned_cols=244 Identities=14% Similarity=0.120 Sum_probs=129.4
Q ss_pred cEEEEEeCCCCC--cChH----HHHHHhhCCCCCEEEEcCCCCC-C------c----HHHHHHHHc--CCCCEEEEcCCC
Q 018902 39 VRIVIVGDVHDD--WDLQ----EDSKALQLLKPDLVLFTGDFGN-E------N----VEIVQSVAE--LEFPKAVILGNH 99 (349)
Q Consensus 39 mril~iSDlH~~--~~~~----~~~~~i~~~~pD~vI~~GDl~~-~------~----~~~l~~l~~--l~~Pi~~V~GNH 99 (349)
++|+++||.-.. .... .+.+.++..+||+||++||++. . . ..+.+.+.. +++|+++++|||
T Consensus 1 ~~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNH 80 (277)
T cd07378 1 LRFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQVPWYLVLGNH 80 (277)
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhcCCeEEecCCc
Confidence 589999999875 2222 2333444579999999999862 1 0 112222222 478999999999
Q ss_pred CCCccccccccchhHHHHH--HH--HhCCcceeeEEee---cCCceEEEeCCeeeecCCchhhhhhhhhhccCCcchHHH
Q 018902 100 DSWKTQEFSGKKKDGVQLQ--LE--CLGEEHVAYRRLD---FPTLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMDES 172 (349)
Q Consensus 100 D~~~~~~~~~~~~~~~~~~--l~--~~~~~~~~~~~l~---~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 172 (349)
|........ ..+... .. .+....+.+..-. .+.+.+.++++..+.-... .... ...........++
T Consensus 81 D~~~~~~~~----~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~i~LDt~~~~~~~~--~~~~-~~~~~~~~~~~~Q 153 (277)
T cd07378 81 DYSGNVSAQ----IDYTKRPNSPRWTMPAYYYRVSFPFPSSDTTVEFIMIDTVPLCGNSD--DIAS-PYGPPNGKLAEEQ 153 (277)
T ss_pred ccCCCchhe----eehhccCCCCCccCcchheEEEeecCCCCCEEEEEEEeChhHcCccc--cccc-cccCcchhhHHHH
Confidence 987432100 000000 00 0111122221100 1245566555542211000 0000 0000111223467
Q ss_pred HHHHHHHHhCCCCCCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCccEEEeCccCCCcc
Q 018902 173 AKRIYKVALGTPDDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKELA 252 (349)
Q Consensus 173 ~~~l~~~l~~~~~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~~ 252 (349)
++|+.+.+++... +++||++|+||+..+.. ...+..++.+..+++ ++++++|++||+|....
T Consensus 154 ~~wL~~~L~~~~~-~~~iv~~H~P~~~~~~~---------------~~~~~~~~~l~~l~~--~~~v~~vl~GH~H~~~~ 215 (277)
T cd07378 154 LAWLEKTLAASTA-DWKIVVGHHPIYSSGEH---------------GPTSCLVDRLLPLLK--KYKVDAYLSGHDHNLQH 215 (277)
T ss_pred HHHHHHHHHhcCC-CeEEEEeCccceeCCCC---------------CCcHHHHHHHHHHHH--HcCCCEEEeCCccccee
Confidence 7888888887655 68999999998654211 112456677888888 45799999999999832
Q ss_pred cCCcceEEEEEcCCceEEEeecccceeeccCCccCCCCCcccccccccCCCCCCceeeEEEEEEeCCeEeE
Q 018902 253 YGNGLRKMIVVGADSTIYLNGAIVPRVKRLIDEQGADSSSVSNKTSFLRPDSKGTVRAFTVVEILDGRIDK 323 (349)
Q Consensus 253 ~~~g~~~~~~~~~~gt~yvn~g~~pr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~v~i~~~~v~~ 323 (349)
.. ....++.|+.+|+.......... ..+..... .....+..+|..++|++++++.
T Consensus 216 ~~--------~~~~~~~~i~~G~~~~~~~~~~~-------~~~~~~~~-~~~~~~~~Gy~~i~v~~~~l~~ 270 (277)
T cd07378 216 IK--------DDGSGTSFVVSGAGSKARPSVKH-------IDKVPQFF-SGFTSSGGGFAYLELTKEELTV 270 (277)
T ss_pred ee--------cCCCCcEEEEeCCCcccCCCCCc-------cCcccccc-cccccCCCCEEEEEEecCEEEE
Confidence 21 12247888888764221111100 00000000 0012456899999999987765
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma |
| >PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [] | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.3e-18 Score=143.96 Aligned_cols=59 Identities=29% Similarity=0.652 Sum_probs=45.0
Q ss_pred cEEEEEeCCCCCcCh-HHHHHHhhCCCCCEEEEcCCCCCCcHHHHHHHHcCCCCEEEEcCCCCCC
Q 018902 39 VRIVIVGDVHDDWDL-QEDSKALQLLKPDLVLFTGDFGNENVEIVQSVAELEFPKAVILGNHDSW 102 (349)
Q Consensus 39 mril~iSDlH~~~~~-~~~~~~i~~~~pD~vI~~GDl~~~~~~~l~~l~~l~~Pi~~V~GNHD~~ 102 (349)
|||+++||+|++... +++++.+ .++|+||++||+++. .++++.++++ |+++|+||||..
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~-~~~~~~~~~~--~~~~v~GNHD~~ 60 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP-EEVLELLRDI--PVYVVRGNHDNW 60 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH-HHHHHHHHHH--EEEEE--CCHST
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH-HHHHHHHhcC--CEEEEeCCcccc
Confidence 899999999998764 5677777 569999999999984 6778877765 899999999964
|
; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A .... |
| >cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.8e-18 Score=147.65 Aligned_cols=62 Identities=19% Similarity=0.258 Sum_probs=44.1
Q ss_pred EEEEeCCCCCcChHH-HH-HHhhCCCCCEEEEcCCCCCCc--HHHH--HHHHcCCCCEEEEcCCCCCC
Q 018902 41 IVIVGDVHDDWDLQE-DS-KALQLLKPDLVLFTGDFGNEN--VEIV--QSVAELEFPKAVILGNHDSW 102 (349)
Q Consensus 41 il~iSDlH~~~~~~~-~~-~~i~~~~pD~vI~~GDl~~~~--~~~l--~~l~~l~~Pi~~V~GNHD~~ 102 (349)
|+++||+|.+..... .+ +.+...++|+|+++||+++.. .+.. ..+.....|+++|+||||++
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~~~~~~~~~~~~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDAPRFAPLLLALKGFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcchHHHHHHHHhhcCCccEEEeCCCcceE
Confidence 579999999876422 21 345567999999999999853 2222 23333478999999999964
|
MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t |
| >cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.5e-17 Score=148.65 Aligned_cols=158 Identities=26% Similarity=0.305 Sum_probs=96.1
Q ss_pred ccEEEEEeCCCCCcCh-----HHHHHHhhCCCCCEEEEcCCCCCCc----HHHHHHHHcC--CCCEEEEcCCCCCCcccc
Q 018902 38 VVRIVIVGDVHDDWDL-----QEDSKALQLLKPDLVLFTGDFGNEN----VEIVQSVAEL--EFPKAVILGNHDSWKTQE 106 (349)
Q Consensus 38 ~mril~iSDlH~~~~~-----~~~~~~i~~~~pD~vI~~GDl~~~~----~~~l~~l~~l--~~Pi~~V~GNHD~~~~~~ 106 (349)
+|||+++||+|.+... +++++.+++.+||+|+++||+++.. ..+.+.+.++ +.|+++++||||+.....
T Consensus 1 ~~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~l~~l~~~~~v~~v~GNHD~~~~~~ 80 (223)
T cd07385 1 GLRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVLELLLELLKKLKAPLGVYAVLGNHDYYSGDE 80 (223)
T ss_pred CCEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhhHHHHHHHhccCCCCCEEEECCCcccccCch
Confidence 4899999999998652 5677778888999999999999853 2344455544 579999999999864321
Q ss_pred ccccchhHHHHHHHHhCCcceeeEEeecCCceEEEeCCeeeecCCchhhhhhhhhhccCCcchHHHHHHHHHHHhCCCCC
Q 018902 107 FSGKKKDGVQLQLECLGEEHVAYRRLDFPTLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMDESAKRIYKVALGTPDD 186 (349)
Q Consensus 107 ~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 186 (349)
..+.+.++..+ +..+.++...+. .++..+.+.|..... .. ...+.+.+...+++
T Consensus 81 ------~~~~~~l~~~~-----v~~L~~~~~~~~-~~~~~i~i~G~~~~~-------~~-------~~~~~~~~~~~~~~ 134 (223)
T cd07385 81 ------ENWIEALESAG-----ITVLRNESVEIS-VGGATIGIAGVDDGL-------GR-------RPDLEKALKGLDED 134 (223)
T ss_pred ------HHHHHHHHHcC-----CEEeecCcEEec-cCCeEEEEEeccCcc-------cc-------CCCHHHHHhCCCCC
Confidence 11133443333 223444433332 222333333211000 00 11233445556667
Q ss_pred CeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCccEEEeCccCCCccc
Q 018902 187 HLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKELAY 253 (349)
Q Consensus 187 ~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~~~ 253 (349)
.++|+++|.|- .. ..+ . +.++|++++||+|..|.+
T Consensus 135 ~~~I~l~H~P~-~~----------------------------~~~-~--~~~~dl~l~GHtHggqi~ 169 (223)
T cd07385 135 DPNILLAHQPD-TA----------------------------EEA-A--AWGVDLQLSGHTHGGQIR 169 (223)
T ss_pred CCEEEEecCCC-hh----------------------------HHh-c--ccCccEEEeccCCCCEEe
Confidence 89999999952 11 111 1 357999999999998643
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia |
| >cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.76 E-value=7.2e-17 Score=143.52 Aligned_cols=144 Identities=22% Similarity=0.199 Sum_probs=92.1
Q ss_pred cEEEEEeCCCCCcCh---------HHHHHHhhCCCCCEEEEcCCCCCCcH---------HHHHHHHcCCCCEEEEcCCCC
Q 018902 39 VRIVIVGDVHDDWDL---------QEDSKALQLLKPDLVLFTGDFGNENV---------EIVQSVAELEFPKAVILGNHD 100 (349)
Q Consensus 39 mril~iSDlH~~~~~---------~~~~~~i~~~~pD~vI~~GDl~~~~~---------~~l~~l~~l~~Pi~~V~GNHD 100 (349)
+||+++||+|..... +.+++.+++.+||+||++||+++... +.++.|.+.++|+++++||||
T Consensus 1 f~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~GNHD 80 (214)
T cd07399 1 FTLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGIPYSVLAGNHD 80 (214)
T ss_pred CEEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCcEEEECCCCc
Confidence 689999999986442 34556666789999999999997432 345555544699999999999
Q ss_pred CCccccccccchhHHHHHHHHhCCcceeeEEeecCCceEEEeCCeeeecCCchhhhhhhhhhccCCcchHHHHHHHHHHH
Q 018902 101 SWKTQEFSGKKKDGVQLQLECLGEEHVAYRRLDFPTLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMDESAKRIYKVA 180 (349)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 180 (349)
.... ++ . . .+ .++++|+.+.+
T Consensus 81 ~~~~---------------------------ld----------~---~---------------~~----~~ql~WL~~~L 101 (214)
T cd07399 81 LVLA---------------------------LE----------F---G---------------PR----DEVLQWANEVL 101 (214)
T ss_pred chhh---------------------------CC----------C---C---------------CC----HHHHHHHHHHH
Confidence 2100 00 0 0 00 23457777777
Q ss_pred hCCCCCCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCccEEEeCccCCCc
Q 018902 181 LGTPDDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKEL 251 (349)
Q Consensus 181 ~~~~~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~ 251 (349)
++.+ +++.|+++|+||...+... +.+..+ .+....++.+.+++++. .++++|++||+|...
T Consensus 102 ~~~~-~~~~iv~~H~p~~~~~~~~-~~~~~~-------~~~~~~~~~~~~ll~~~-~~V~~v~~GH~H~~~ 162 (214)
T cd07399 102 KKHP-DRPAILTTHAYLNCDDSRP-DSIDYD-------SDVNDGQQIWDKLVKKN-DNVFMVLSGHVHGAG 162 (214)
T ss_pred HHCC-CCCEEEEecccccCCCCcC-cccccc-------cccccHHHHHHHHHhCC-CCEEEEEccccCCCc
Confidence 7654 5679999999986442211 110000 01122334566777733 279999999999983
|
YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for |
| >PRK10966 exonuclease subunit SbcD; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.3e-17 Score=157.67 Aligned_cols=65 Identities=25% Similarity=0.280 Sum_probs=51.0
Q ss_pred cEEEEEeCCCCCcC-------------hHHHHHHhhCCCCCEEEEcCCCCCCc----------HHHHHHHHcCCCCEEEE
Q 018902 39 VRIVIVGDVHDDWD-------------LQEDSKALQLLKPDLVLFTGDFGNEN----------VEIVQSVAELEFPKAVI 95 (349)
Q Consensus 39 mril~iSDlH~~~~-------------~~~~~~~i~~~~pD~vI~~GDl~~~~----------~~~l~~l~~l~~Pi~~V 95 (349)
|||+|+||+|++.. .+.+++.+++.+||+||++||++|.. .++++.|.+.++|+++|
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~~~~v~~I 80 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQTGCQLVVL 80 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 79999999999742 13455667788999999999999852 13455666668999999
Q ss_pred cCCCCCCc
Q 018902 96 LGNHDSWK 103 (349)
Q Consensus 96 ~GNHD~~~ 103 (349)
+||||...
T Consensus 81 ~GNHD~~~ 88 (407)
T PRK10966 81 AGNHDSVA 88 (407)
T ss_pred cCCCCChh
Confidence 99999754
|
|
| >cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.7e-17 Score=146.71 Aligned_cols=66 Identities=30% Similarity=0.349 Sum_probs=50.0
Q ss_pred EEEEEeCCCCCcCh----------------HHHHHHhhCCCCCEEEEcCCCCCCc-------HHHHHHHHcC---CCCEE
Q 018902 40 RIVIVGDVHDDWDL----------------QEDSKALQLLKPDLVLFTGDFGNEN-------VEIVQSVAEL---EFPKA 93 (349)
Q Consensus 40 ril~iSDlH~~~~~----------------~~~~~~i~~~~pD~vI~~GDl~~~~-------~~~l~~l~~l---~~Pi~ 93 (349)
||+|+||+|++... +++++.+++.+||+||++||+++.. ..+.+.+.++ ++|++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVF 80 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 69999999997541 4455666678999999999999842 2344444444 78999
Q ss_pred EEcCCCCCCccc
Q 018902 94 VILGNHDSWKTQ 105 (349)
Q Consensus 94 ~V~GNHD~~~~~ 105 (349)
+++||||.....
T Consensus 81 ~~~GNHD~~~~~ 92 (223)
T cd00840 81 IIAGNHDSPSRL 92 (223)
T ss_pred EecCCCCCcccc
Confidence 999999987643
|
Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi |
| >cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.9e-16 Score=135.47 Aligned_cols=61 Identities=21% Similarity=0.244 Sum_probs=45.3
Q ss_pred EEEEEeCCCCCcCh----HHHHHHhhCCCCCEEEEcCCCCCCcHHHHHHHHcCCCCEEEEcCCCCCC
Q 018902 40 RIVIVGDVHDDWDL----QEDSKALQLLKPDLVLFTGDFGNENVEIVQSVAELEFPKAVILGNHDSW 102 (349)
Q Consensus 40 ril~iSDlH~~~~~----~~~~~~i~~~~pD~vI~~GDl~~~~~~~l~~l~~l~~Pi~~V~GNHD~~ 102 (349)
+|+++||+|.+... +.+.+.++..++|.||++||++. .+.++.+.++..|+++|.||||..
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~~~~d~iih~GDi~~--~~~~~~l~~~~~~~~~V~GN~D~~ 65 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVPGKIQHVLCTGNLCS--KETYDYLKTIAPDVHIVRGDFDEN 65 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhccCCCCEEEECCCCCC--HHHHHHHHhhCCceEEEECCCCcc
Confidence 48999999965432 23555555568999999999987 455666655555799999999963
|
Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl |
| >PRK09453 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=7.2e-17 Score=139.96 Aligned_cols=64 Identities=14% Similarity=0.192 Sum_probs=52.6
Q ss_pred cEEEEEeCCCCCcCh-HHHHHHhhCCCCCEEEEcCCCCCC-----------cHHHHHHHHcCCCCEEEEcCCCCCC
Q 018902 39 VRIVIVGDVHDDWDL-QEDSKALQLLKPDLVLFTGDFGNE-----------NVEIVQSVAELEFPKAVILGNHDSW 102 (349)
Q Consensus 39 mril~iSDlH~~~~~-~~~~~~i~~~~pD~vI~~GDl~~~-----------~~~~l~~l~~l~~Pi~~V~GNHD~~ 102 (349)
|||+++||+|++... +++++.+++.++|.|+++||+++. ..++++.|.++..++++|+||||..
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~V~GNhD~~ 76 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAYADKIIAVRGNCDSE 76 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhcCCceEEEccCCcch
Confidence 799999999987653 556777777899999999999863 2457777877778999999999964
|
|
| >PHA02546 47 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.3e-16 Score=148.64 Aligned_cols=65 Identities=20% Similarity=0.265 Sum_probs=49.7
Q ss_pred cEEEEEeCCCCCcCh-------------HHHHHHhhCCCCCEEEEcCCCCCCc-------HH-----HHHHHHcCCCCEE
Q 018902 39 VRIVIVGDVHDDWDL-------------QEDSKALQLLKPDLVLFTGDFGNEN-------VE-----IVQSVAELEFPKA 93 (349)
Q Consensus 39 mril~iSDlH~~~~~-------------~~~~~~i~~~~pD~vI~~GDl~~~~-------~~-----~l~~l~~l~~Pi~ 93 (349)
|||+|+||+|++... +++++.+++.+||+||++||++|.. .. +++.|.+.++|++
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~ 80 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLH 80 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 899999999997431 3455666788999999999999852 11 2344555689999
Q ss_pred EEcCCCCCCc
Q 018902 94 VILGNHDSWK 103 (349)
Q Consensus 94 ~V~GNHD~~~ 103 (349)
+|+||||...
T Consensus 81 ~I~GNHD~~~ 90 (340)
T PHA02546 81 VLVGNHDMYY 90 (340)
T ss_pred EEccCCCccc
Confidence 9999999753
|
|
| >COG0622 Predicted phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.5e-16 Score=133.19 Aligned_cols=64 Identities=22% Similarity=0.319 Sum_probs=48.1
Q ss_pred ccEEEEEeCCCCCcCh-HHHHHHhhCCCCCEEEEcCCCCCCcHHHHHHHHc-CCCCEEEEcCCCCCCc
Q 018902 38 VVRIVIVGDVHDDWDL-QEDSKALQLLKPDLVLFTGDFGNENVEIVQSVAE-LEFPKAVILGNHDSWK 103 (349)
Q Consensus 38 ~mril~iSDlH~~~~~-~~~~~~i~~~~pD~vI~~GDl~~~~~~~l~~l~~-l~~Pi~~V~GNHD~~~ 103 (349)
+|||+++||+|+.... +...+.....++|+||++||++... ....+.. +..++++|.||+|...
T Consensus 1 ~m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~--~~~~l~~~~~~~i~~V~GN~D~~~ 66 (172)
T COG0622 1 MMKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPF--TLDALEGGLAAKLIAVRGNCDGEV 66 (172)
T ss_pred CcEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCcc--chHHhhcccccceEEEEccCCCcc
Confidence 4899999999999753 4455555678999999999998742 2223333 4678999999999753
|
|
| >cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.72 E-value=2e-16 Score=133.46 Aligned_cols=58 Identities=24% Similarity=0.338 Sum_probs=42.5
Q ss_pred EEEEEeCCCCCcCh-HHHHHHhhCCCCCEEEEcCCCCCCcHHHHHHHHcCCCCEEEEcCCCCCC
Q 018902 40 RIVIVGDVHDDWDL-QEDSKALQLLKPDLVLFTGDFGNENVEIVQSVAELEFPKAVILGNHDSW 102 (349)
Q Consensus 40 ril~iSDlH~~~~~-~~~~~~i~~~~pD~vI~~GDl~~~~~~~l~~l~~l~~Pi~~V~GNHD~~ 102 (349)
||+++||+|.+... +++++.++. +|.|+++||+++...... + ....|+++|+||||..
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~--~-~~~~~~~~V~GNhD~~ 59 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE--L-ELKAPVIAVRGNCDGE 59 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch--h-hcCCcEEEEeCCCCCc
Confidence 68999999998642 445555433 999999999987543211 2 2367899999999964
|
YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph |
| >cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.71 E-value=8.1e-17 Score=134.07 Aligned_cols=60 Identities=32% Similarity=0.428 Sum_probs=44.2
Q ss_pred EEEEeCCCCCcCh------H-----HHHHHhhCCCCCEEEEcCCCCCCc-----HHHHHHHHcCC---CCEEEEcCCCC
Q 018902 41 IVIVGDVHDDWDL------Q-----EDSKALQLLKPDLVLFTGDFGNEN-----VEIVQSVAELE---FPKAVILGNHD 100 (349)
Q Consensus 41 il~iSDlH~~~~~------~-----~~~~~i~~~~pD~vI~~GDl~~~~-----~~~l~~l~~l~---~Pi~~V~GNHD 100 (349)
|+++||+|++... . .+++.++..++|+|+++||+++.. ..+.+.+.++. .|+++|+||||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~GNHD 79 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGLPEEFEEAREFLDALPAPLEPVLVVPGNHD 79 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCCHHHHHHHHHHHHHccccCCcEEEeCCCCe
Confidence 6899999997652 1 245666778999999999999853 22334444443 49999999999
|
YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv |
| >COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.5e-16 Score=152.60 Aligned_cols=67 Identities=30% Similarity=0.361 Sum_probs=52.4
Q ss_pred cEEEEEeCCCCCcCh--------------HHHHHHhhCCCCCEEEEcCCCCCCc----------HHHHHHHHcCCCCEEE
Q 018902 39 VRIVIVGDVHDDWDL--------------QEDSKALQLLKPDLVLFTGDFGNEN----------VEIVQSVAELEFPKAV 94 (349)
Q Consensus 39 mril~iSDlH~~~~~--------------~~~~~~i~~~~pD~vI~~GDl~~~~----------~~~l~~l~~l~~Pi~~ 94 (349)
|||+|+||+|++... ..+++.+...++|+||++||++|.. .+.+++|...++|+|+
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~ 80 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVV 80 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEE
Confidence 899999999999321 3456677788999999999999852 3455555555799999
Q ss_pred EcCCCCCCccc
Q 018902 95 ILGNHDSWKTQ 105 (349)
Q Consensus 95 V~GNHD~~~~~ 105 (349)
|+||||.....
T Consensus 81 I~GNHD~~~~~ 91 (390)
T COG0420 81 IAGNHDSPSRL 91 (390)
T ss_pred ecCCCCchhcc
Confidence 99999986543
|
|
| >cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.68 E-value=7.4e-16 Score=135.50 Aligned_cols=63 Identities=30% Similarity=0.400 Sum_probs=47.1
Q ss_pred ccEEEEEeCCCCCcCh-------------HHHHHHhhCCCCCEEEEcCCCCCCc----------HHHHHHHHcCCCCEEE
Q 018902 38 VVRIVIVGDVHDDWDL-------------QEDSKALQLLKPDLVLFTGDFGNEN----------VEIVQSVAELEFPKAV 94 (349)
Q Consensus 38 ~mril~iSDlH~~~~~-------------~~~~~~i~~~~pD~vI~~GDl~~~~----------~~~l~~l~~l~~Pi~~ 94 (349)
.|||+++||+|++... ..+.+.++..+||+||++||+++.. .++++.+.+.++|+++
T Consensus 2 ~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~ 81 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAA 81 (199)
T ss_pred ceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEE
Confidence 5899999999996542 1223345567999999999998631 2344555555899999
Q ss_pred EcCCCC
Q 018902 95 ILGNHD 100 (349)
Q Consensus 95 V~GNHD 100 (349)
++||||
T Consensus 82 ~~GNHD 87 (199)
T cd07383 82 TFGNHD 87 (199)
T ss_pred ECccCC
Confidence 999999
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP |
| >PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.4e-16 Score=131.00 Aligned_cols=65 Identities=29% Similarity=0.526 Sum_probs=47.9
Q ss_pred cEEEEEeCCCCCcChH-----HHHHHhhCCCCCEEEEcCCCCCCcH---H-H-----HHHHHcCCCCEEEEcCCCCCCc
Q 018902 39 VRIVIVGDVHDDWDLQ-----EDSKALQLLKPDLVLFTGDFGNENV---E-I-----VQSVAELEFPKAVILGNHDSWK 103 (349)
Q Consensus 39 mril~iSDlH~~~~~~-----~~~~~i~~~~pD~vI~~GDl~~~~~---~-~-----l~~l~~l~~Pi~~V~GNHD~~~ 103 (349)
|||+++||+|++.... .........++|+||++||+++... . . .........|+++++||||...
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~ 79 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYS 79 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhccccccccccccccce
Confidence 7999999999987643 3444555789999999999998631 1 1 2233445899999999999864
|
The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C .... |
| >TIGR00619 sbcd exonuclease SbcD | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.7e-15 Score=137.95 Aligned_cols=65 Identities=26% Similarity=0.331 Sum_probs=50.7
Q ss_pred cEEEEEeCCCCCcCh-------------HHHHHHhhCCCCCEEEEcCCCCCCc----------HHHHHHHHcCC-CCEEE
Q 018902 39 VRIVIVGDVHDDWDL-------------QEDSKALQLLKPDLVLFTGDFGNEN----------VEIVQSVAELE-FPKAV 94 (349)
Q Consensus 39 mril~iSDlH~~~~~-------------~~~~~~i~~~~pD~vI~~GDl~~~~----------~~~l~~l~~l~-~Pi~~ 94 (349)
|||+|+||+|++... +++++.+.+.+||+||++||++|.. .++++.|.+.. +|+++
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~ 80 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVV 80 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEE
Confidence 899999999997531 3456666778999999999999852 23555666555 89999
Q ss_pred EcCCCCCCc
Q 018902 95 ILGNHDSWK 103 (349)
Q Consensus 95 V~GNHD~~~ 103 (349)
|+||||...
T Consensus 81 i~GNHD~~~ 89 (253)
T TIGR00619 81 ISGNHDSAQ 89 (253)
T ss_pred EccCCCChh
Confidence 999999754
|
This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). |
| >cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.6e-14 Score=131.59 Aligned_cols=165 Identities=14% Similarity=0.052 Sum_probs=90.4
Q ss_pred CCCCCEEEEcCCCCCCcH------------HHHHHHHcC--CCCEEEEcCCCCCCccccccccchhHHHHHHHHhCCcce
Q 018902 62 LLKPDLVLFTGDFGNENV------------EIVQSVAEL--EFPKAVILGNHDSWKTQEFSGKKKDGVQLQLECLGEEHV 127 (349)
Q Consensus 62 ~~~pD~vI~~GDl~~~~~------------~~l~~l~~l--~~Pi~~V~GNHD~~~~~~~~~~~~~~~~~~l~~~~~~~~ 127 (349)
..+||+||++|||+|+.. ++.+.+..+ ..|+++||||||+........ ....++.+.++....
T Consensus 43 ~l~PD~vv~lGDL~d~G~~~~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig~~~~~~~---~~~~rf~~~Fg~~~~ 119 (257)
T cd08163 43 QLKPDSTIFLGDLFDGGRDWADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIGFGNGVVL---PVRQRFEKYFGPTSR 119 (257)
T ss_pred hcCCCEEEEecccccCCeeCcHHHHHHHHHHHHHHhcCCCccceEEEeCCCcccCCCCCCCH---HHHHHHHHHhCCCce
Confidence 469999999999998532 122223222 268999999999865432111 122333334454322
Q ss_pred eeEEeecCCceEEEeCCeeeecCCchhhhhhhhhhccCCcchHHHHHHHHHHHhCCCCCCeEEEEeccCCCCCCCCCCCC
Q 018902 128 AYRRLDFPTLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMDESAKRIYKVALGTPDDHLVILLAHNGPSGLGSEPNDI 207 (349)
Q Consensus 128 ~~~~l~~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~Ilv~H~PP~~~g~~~~~~ 207 (349)
..+.++..++++++..+ .+.. .+ .-...+.+++.+.+...+++.++||++|+|++.... ..
T Consensus 120 ---~~~~~~~~fV~Lds~~l--~~~~----------~~-~~~~~~~~~l~~~l~~~~~~~p~ILl~H~Plyr~~~---~~ 180 (257)
T cd08163 120 ---VIDVGNHTFVILDTISL--SNKD----------DP-DVYQPPREFLHSFSAMKVKSKPRILLTHVPLYRPPN---TS 180 (257)
T ss_pred ---EEEECCEEEEEEccccc--cCCc----------cc-ccchhHHHHHHhhhhccCCCCcEEEEeccccccCCC---CC
Confidence 23345566666665321 1110 00 001123455666666666778999999999876533 35
Q ss_pred CCC---CCCCCCCC--CCCHH--HHHHHHHHHHhcCCCccEEEeCccCCC
Q 018902 208 CGK---DWGFGGGD--HGDPD--LAQAISLLKETTKLCIPLVVFGHMHKE 250 (349)
Q Consensus 208 ~~~---d~~~~~~~--~G~~~--~~~al~~l~~~~~~~~~lvl~GH~H~~ 250 (349)
||. .+...... +...+ -.+.-+++++. .+|.+||+||+|..
T Consensus 181 cg~~re~~~~~~~~~g~~yq~~l~~~~s~~il~~--~~P~~vfsGhdH~~ 228 (257)
T cd08163 181 CGPLRESKTPLPYGYGYQYQNLLEPSLSEVILKA--VQPVIAFSGDDHDY 228 (257)
T ss_pred CCCccccCCCCCCCCCccceeecCHHHHHHHHHh--hCCcEEEecCCCcc
Confidence 662 22111111 11110 11334455653 35999999999987
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site |
| >PTZ00422 glideosome-associated protein 50; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=8.5e-14 Score=132.10 Aligned_cols=232 Identities=11% Similarity=0.041 Sum_probs=127.8
Q ss_pred CccEEEEEeCCCCCcChHHHH-----HHhhCCCCCEEEEcCCCCCCc------HHHHHHH-------H-cCCCCEEEEcC
Q 018902 37 SVVRIVIVGDVHDDWDLQEDS-----KALQLLKPDLVLFTGDFGNEN------VEIVQSV-------A-ELEFPKAVILG 97 (349)
Q Consensus 37 ~~mril~iSDlH~~~~~~~~~-----~~i~~~~pD~vI~~GDl~~~~------~~~l~~l-------~-~l~~Pi~~V~G 97 (349)
..++|+.++|.-.+...+..+ +..+..++|+||.+||-++.. .++.+.+ + .+.+|++.|+|
T Consensus 25 ~~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~vLG 104 (394)
T PTZ00422 25 AQLRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTVLG 104 (394)
T ss_pred CeEEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCCeEEeCC
Confidence 458999999998765543332 233467999999999986421 1222222 1 15789999999
Q ss_pred CCCCCccccc--cccchh------------------HHHHHHHHhCCcceee----EE----------eecCCceEEEeC
Q 018902 98 NHDSWKTQEF--SGKKKD------------------GVQLQLECLGEEHVAY----RR----------LDFPTLKLSIVG 143 (349)
Q Consensus 98 NHD~~~~~~~--~~~~~~------------------~~~~~l~~~~~~~~~~----~~----------l~~~~~~i~~~g 143 (349)
|||+....+. .+.... .-++.+. +.++.+ .. .....+.+..++
T Consensus 105 NHDy~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP---~~yY~~~~~f~~~~~~~~~~~~~~~~~v~fifiD 181 (394)
T PTZ00422 105 QADWDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMP---NYWYHYFTHFTDTSGPSLLKSGHKDMSVAFIFID 181 (394)
T ss_pred cccccCCchhhhccccccccccccccccccccccccCCCccCC---chhheeeeeeecccccccccccCCCCEEEEEEEE
Confidence 9998644321 000000 0000000 000100 00 001112334444
Q ss_pred CeeeecCCchhhhhhhhhhccCC-cchHHHHHHHHHHHhCC-CCCCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCC-C
Q 018902 144 GRPFSCGGQQIFRKRLLSVRYGV-QDMDESAKRIYKVALGT-PDDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDH-G 220 (349)
Q Consensus 144 ~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~-~~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~-G 220 (349)
..++.- . +.. +......+++.++++.. ...+++||+.|||.+..| .| +
T Consensus 182 T~~l~~--~-----------~~~~~~~~~~w~~L~~~L~~a~k~a~WkIVvGHhPIySsG----------------~hg~ 232 (394)
T PTZ00422 182 TWILSS--S-----------FPYKKVSERAWQDLKATLEYAPKIADYIIVVGDKPIYSSG----------------SSKG 232 (394)
T ss_pred Cchhcc--c-----------CCccccCHHHHHHHHHHHHhhccCCCeEEEEecCceeecC----------------CCCC
Confidence 433321 0 100 01112335566665422 234699999999987653 23 4
Q ss_pred CHHHHHHHHHHHHhcCCCccEEEeCccCCCcccCCcceEEEEEcCCceEEEeecccceeeccCCccCCCCCccccccccc
Q 018902 221 DPDLAQAISLLKETTKLCIPLVVFGHMHKELAYGNGLRKMIVVGADSTIYLNGAIVPRVKRLIDEQGADSSSVSNKTSFL 300 (349)
Q Consensus 221 ~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~~~~~g~~~~~~~~~~gt~yvn~g~~pr~~~~~~~~~~~~~~~~~~~~~~ 300 (349)
+.++...|..+++ ++++|++++||.|..+.. ..+++.|+.+|+.-....... .-.+.+.|+
T Consensus 233 ~~~L~~~L~PLL~--ky~VdlYisGHDH~lq~i----------~~~gt~yIvSGaGs~~~~~~~-------~~~~~s~F~ 293 (394)
T PTZ00422 233 DSYLSYYLLPLLK--DAQVDLYISGYDRNMEVL----------TDEGTAHINCGSGGNSGRKSI-------MKNSKSLFY 293 (394)
T ss_pred CHHHHHHHHHHHH--HcCcCEEEEccccceEEe----------cCCCceEEEeCccccccCCCC-------CCCCCccee
Confidence 5788889999999 667999999999998421 225788998887422111000 001123332
Q ss_pred CCCCCCceeeEEEEEEeCCeEeEE
Q 018902 301 RPDSKGTVRAFTVVEILDGRIDKI 324 (349)
Q Consensus 301 ~~~~~~~~~~f~~v~i~~~~v~~~ 324 (349)
....+|..+++...+++..
T Consensus 294 -----~~~~GF~~~~l~~~~l~~~ 312 (394)
T PTZ00422 294 -----SEDIGFCIHELNAEGMVTK 312 (394)
T ss_pred -----cCCCCEEEEEEecCEEEEE
Confidence 2347899999999888663
|
|
| >cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.4e-14 Score=132.62 Aligned_cols=201 Identities=15% Similarity=0.172 Sum_probs=111.2
Q ss_pred HHHHHHhhCC--CCCEEEEcCCCCCCc--------------HHHHHHHHc--CCCCEEEEcCCCCCCccccccc----c-
Q 018902 54 QEDSKALQLL--KPDLVLFTGDFGNEN--------------VEIVQSVAE--LEFPKAVILGNHDSWKTQEFSG----K- 110 (349)
Q Consensus 54 ~~~~~~i~~~--~pD~vI~~GDl~~~~--------------~~~l~~l~~--l~~Pi~~V~GNHD~~~~~~~~~----~- 110 (349)
+..++.+++. +||+||++||+++.. ..+.+.+.+ ..+|++.++||||......+.. .
T Consensus 56 ~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~~p~~~~~~~~~~~~ 135 (296)
T cd00842 56 ESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDSYPVNQFPPNNSPSW 135 (296)
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCCCcccccCCcccccH
Confidence 4456666666 999999999998631 112333443 2689999999999876543322 0
Q ss_pred chhHHHHHHHHhCC-------cceeeEEee-cCCceEEEeCCeeeecCCchhhhhhhhhhccCCcchHHHHHHHHHHHhC
Q 018902 111 KKDGVQLQLECLGE-------EHVAYRRLD-FPTLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMDESAKRIYKVALG 182 (349)
Q Consensus 111 ~~~~~~~~l~~~~~-------~~~~~~~l~-~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 182 (349)
....+......... ...+|.... ..++++..++...+..... +.. . ....+...+++|+.++|++
T Consensus 136 ~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~~-~~~-----~-~~~~~~~~Ql~WL~~~L~~ 208 (296)
T cd00842 136 LYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKNF-WLL-----G-SNETDPAGQLQWLEDELQE 208 (296)
T ss_pred HHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccCh-hhh-----c-cCCCCHHHHHHHHHHHHHH
Confidence 01111111111110 111333333 5666777666643322111 000 0 1233445678888888887
Q ss_pred CC-CCCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCccEEEeCccCCCcccCCcceEEE
Q 018902 183 TP-DDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKELAYGNGLRKMI 261 (349)
Q Consensus 183 ~~-~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~~~~~g~~~~~ 261 (349)
.. ....++|++|+||...+... .+...+.+.+++++++..+.++|+||+|.... +++
T Consensus 209 a~~~~~~v~I~~HiPp~~~~~~~----------------~~~~~~~~~~ii~~y~~~i~~~~~GH~H~d~~------~~~ 266 (296)
T cd00842 209 AEQAGEKVWIIGHIPPGVNSYDT----------------LENWSERYLQIINRYSDTIAGQFFGHTHRDEF------RVF 266 (296)
T ss_pred HHHCCCeEEEEeccCCCCccccc----------------chHHHHHHHHHHHHHHHhhheeeecccccceE------EEE
Confidence 64 34568899999985431110 02445677778876544478999999999732 111
Q ss_pred EE-----cCCceEEEeecccceeeccC
Q 018902 262 VV-----GADSTIYLNGAIVPRVKRLI 283 (349)
Q Consensus 262 ~~-----~~~gt~yvn~g~~pr~~~~~ 283 (349)
.- .+....++.++..|....++
T Consensus 267 ~~~~~~~~~~~~~~~~psitp~~~~nP 293 (296)
T cd00842 267 YDDNDTGEPINVALIAPSVTPYSGNNP 293 (296)
T ss_pred eCCCCCCCceEEEEecCccCcCCCCCC
Confidence 11 12356677777666654333
|
Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but |
| >COG1409 Icc Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.62 E-value=8.1e-14 Score=129.26 Aligned_cols=66 Identities=35% Similarity=0.483 Sum_probs=52.7
Q ss_pred cEEEEEeCCCCCc--Ch-----HHHHHHhhCCCCCEEEEcCCCCCCc-----HHHHHHHH--cCCCCEEEEcCCCCCCcc
Q 018902 39 VRIVIVGDVHDDW--DL-----QEDSKALQLLKPDLVLFTGDFGNEN-----VEIVQSVA--ELEFPKAVILGNHDSWKT 104 (349)
Q Consensus 39 mril~iSDlH~~~--~~-----~~~~~~i~~~~pD~vI~~GDl~~~~-----~~~l~~l~--~l~~Pi~~V~GNHD~~~~ 104 (349)
|||++|||+|++. .. .++++.++..+||+||++|||++.. ....+.|. .++.|++++|||||....
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~~~~~~~~~~~l~~~~~~~~~~~vpGNHD~~~~ 80 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGEPEEYRRLKELLARLELPAPVIVVPGNHDARVV 80 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCCCHHHHHHHHHHHhhccCCCceEeeCCCCcCCch
Confidence 6899999999993 21 5567888888999999999999862 33455566 568899999999998654
|
|
| >COG1768 Predicted phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.60 E-value=3e-14 Score=118.33 Aligned_cols=188 Identities=23% Similarity=0.299 Sum_probs=105.7
Q ss_pred cEEEEEeCCCCCcCh---------------HHHHHHhhC--CCCCEEEEcCCCC-----CCcHHHHHHHHcCCCCEEEEc
Q 018902 39 VRIVIVGDVHDDWDL---------------QEDSKALQL--LKPDLVLFTGDFG-----NENVEIVQSVAELEFPKAVIL 96 (349)
Q Consensus 39 mril~iSDlH~~~~~---------------~~~~~~i~~--~~pD~vI~~GDl~-----~~~~~~l~~l~~l~~Pi~~V~ 96 (349)
|+|..++|+|+.... +++.+..+. ..-|.|++.||+. .++.+-++.+..++-..|.|.
T Consensus 1 M~iyaiaDLHLa~~~pKpM~vFGe~W~gh~ekI~k~W~~~v~~eDiVllpGDiSWaM~l~ea~~Dl~~i~~LPG~K~m~r 80 (230)
T COG1768 1 MRIYAIADLHLALGVPKPMEVFGEPWSGHHEKIKKHWRSKVSPEDIVLLPGDISWAMRLEEAEEDLRFIGDLPGTKYMIR 80 (230)
T ss_pred CceeeeehhhHhhCCCCceeecCCcccCchHHHHHHHHhcCChhhEEEecccchhheechhhhhhhhhhhcCCCcEEEEe
Confidence 789999999985321 444444442 3458999999996 345667777888888899999
Q ss_pred CCCCCCccccccccchhHHHHHHHHhCCcceeeEEeecCCceEEEeCCeeeecCCchhhhhhhhhhccCCcc---hHHHH
Q 018902 97 GNHDSWKTQEFSGKKKDGVQLQLECLGEEHVAYRRLDFPTLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQD---MDESA 173 (349)
Q Consensus 97 GNHD~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~---~~~~~ 173 (349)
||||++.... . ...+.+...+..+.+ +|.. .+..++|.+.|..+...+. -+.+.| +....
T Consensus 81 GNHDYWw~s~-s-kl~n~lp~~l~~~n~---~f~l-----~n~aI~G~RgW~s~~~~~e-------~~te~Deki~~RE~ 143 (230)
T COG1768 81 GNHDYWWSSI-S-KLNNALPPILFYLNN---GFEL-----LNYAIVGVRGWDSPSFDSE-------PLTEQDEKIFLREI 143 (230)
T ss_pred cCCccccchH-H-HHHhhcCchHhhhcc---ceeE-----eeEEEEEeecccCCCCCcC-------ccchhHHHHHHHHH
Confidence 9999986421 0 001111111111111 1222 1345566665554422110 022211 11223
Q ss_pred HHHHH-HHhCCCC-CCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCccEEEeCccCCCc
Q 018902 174 KRIYK-VALGTPD-DHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKEL 251 (349)
Q Consensus 174 ~~l~~-~l~~~~~-~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~ 251 (349)
.++.. ..++.+. -...|||+|+||+..... + .-+.++++ ..+++.+++||+|..+
T Consensus 144 ~RLrlsa~a~l~k~~~~fivM~HYPP~s~~~t----------------~-----~~~sevle--e~rv~~~lyGHlHgv~ 200 (230)
T COG1768 144 GRLRLSADAALPKGVSKFIVMTHYPPFSDDGT----------------P-----GPFSEVLE--EGRVSKCLYGHLHGVP 200 (230)
T ss_pred HHHHHHHHHhcccCcCeEEEEEecCCCCCCCC----------------C-----cchHHHHh--hcceeeEEeeeccCCC
Confidence 34433 2233332 345799999999764111 1 12455555 3469999999999987
Q ss_pred ccCCcceEEEEEcCCceEEE
Q 018902 252 AYGNGLRKMIVVGADSTIYL 271 (349)
Q Consensus 252 ~~~~g~~~~~~~~~~gt~yv 271 (349)
+-..|...+ +|+.|.
T Consensus 201 ~p~~~~s~v-----~Gi~y~ 215 (230)
T COG1768 201 RPNIGFSNV-----RGIEYM 215 (230)
T ss_pred CCCCCcccc-----cCceEE
Confidence 655554444 566654
|
|
| >PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.8e-13 Score=123.89 Aligned_cols=64 Identities=16% Similarity=0.231 Sum_probs=47.1
Q ss_pred cEEEEEeCCCCCcCh----HHHHHHhh--CCCCCEEEEcCCCCCC----------c---HHHHHHHHcCCCCEEEEcCCC
Q 018902 39 VRIVIVGDVHDDWDL----QEDSKALQ--LLKPDLVLFTGDFGNE----------N---VEIVQSVAELEFPKAVILGNH 99 (349)
Q Consensus 39 mril~iSDlH~~~~~----~~~~~~i~--~~~pD~vI~~GDl~~~----------~---~~~l~~l~~l~~Pi~~V~GNH 99 (349)
||++++||+|++... +.+++.+. ..+||.|+++||+++. . .+.++.+.+.++|+++|+|||
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~g~~v~~v~GNH 80 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDSGVPCYFMHGNR 80 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhhccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHcCCeEEEEeCCC
Confidence 799999999988643 23444443 3689999999999872 1 234455555568999999999
Q ss_pred CCC
Q 018902 100 DSW 102 (349)
Q Consensus 100 D~~ 102 (349)
|..
T Consensus 81 D~~ 83 (241)
T PRK05340 81 DFL 83 (241)
T ss_pred chh
Confidence 974
|
|
| >cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.1e-14 Score=116.42 Aligned_cols=55 Identities=29% Similarity=0.424 Sum_probs=38.0
Q ss_pred EEEeCCCCCcCh-HHHHHHhhCCCCCEEEEcCCCCCCcHHHHHHHHcCCCCEEEEcCCCC
Q 018902 42 VIVGDVHDDWDL-QEDSKALQLLKPDLVLFTGDFGNENVEIVQSVAELEFPKAVILGNHD 100 (349)
Q Consensus 42 l~iSDlH~~~~~-~~~~~~i~~~~pD~vI~~GDl~~~~~~~l~~l~~l~~Pi~~V~GNHD 100 (349)
+++||+|..... +++.. ...++|.++++||+.++..+.+..+ ...|+++|.||||
T Consensus 1 ~viSDtH~~~~~~~~~~~--~~~~~d~ii~~GD~~~~~~~~~~~~--~~~~~~~V~GN~D 56 (129)
T cd07403 1 LVISDTESPALYSPEIKV--RLEGVDLILSAGDLPKEYLEYLVTM--LNVPVYYVHGNHD 56 (129)
T ss_pred CeeccccCccccchHHHh--hCCCCCEEEECCCCChHHHHHHHHH--cCCCEEEEeCCCc
Confidence 479999965332 11111 2578999999999976554444443 2568999999999
|
TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >COG1408 Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.55 E-value=4.6e-14 Score=129.91 Aligned_cols=70 Identities=26% Similarity=0.271 Sum_probs=52.8
Q ss_pred CCccEEEEEeCCCCCcCh---HHHHHHhhCCCCCEEEEcCCCCCC-----cHHHHHHHHcC--CCCEEEEcCCCCCCccc
Q 018902 36 ASVVRIVIVGDVHDDWDL---QEDSKALQLLKPDLVLFTGDFGNE-----NVEIVQSVAEL--EFPKAVILGNHDSWKTQ 105 (349)
Q Consensus 36 ~~~mril~iSDlH~~~~~---~~~~~~i~~~~pD~vI~~GDl~~~-----~~~~l~~l~~l--~~Pi~~V~GNHD~~~~~ 105 (349)
..++||+++||+|..... .+.+..+....||+|+++||+++. .....+.|.++ +.++|+|.||||+....
T Consensus 42 ~~~~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~~~~~~~~~~~L~~L~~~~gv~av~GNHd~~~~~ 121 (284)
T COG1408 42 LQGLKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDRPPGVAALALFLAKLKAPLGVFAVLGNHDYGVDR 121 (284)
T ss_pred cCCeEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCCCCCHHHHHHHHHhhhccCCEEEEeccccccccc
Confidence 466899999999998776 445555666777999999999983 13445555554 56799999999987553
|
|
| >TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.3e-13 Score=124.15 Aligned_cols=61 Identities=20% Similarity=0.245 Sum_probs=45.3
Q ss_pred EEEeCCCCCcCh----HHHHHHhhC--CCCCEEEEcCCCCCC-------c------HHHHHHHHcCCCCEEEEcCCCCCC
Q 018902 42 VIVGDVHDDWDL----QEDSKALQL--LKPDLVLFTGDFGNE-------N------VEIVQSVAELEFPKAVILGNHDSW 102 (349)
Q Consensus 42 l~iSDlH~~~~~----~~~~~~i~~--~~pD~vI~~GDl~~~-------~------~~~l~~l~~l~~Pi~~V~GNHD~~ 102 (349)
+++||+|++... +.+++.+.. .+||+|+++||++|. . .+.++.|.+.+.|+++|+||||..
T Consensus 2 ~~iSDlHl~~~~~~~~~~~l~~l~~~~~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~~~~v~~v~GNHD~~ 81 (231)
T TIGR01854 2 LFISDLHLSPERPDITALFLDFLREEARKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQGVPCYFMHGNRDFL 81 (231)
T ss_pred eEEEecCCCCCChhHHHHHHHHHHhhhccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHCCCeEEEEcCCCchh
Confidence 799999988642 445666654 379999999999972 1 234555655578999999999974
|
This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown. |
| >KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.3e-12 Score=115.45 Aligned_cols=252 Identities=20% Similarity=0.258 Sum_probs=134.6
Q ss_pred CCCCCCCccEEEEEeCCCC--CcChHHH----HHHhhCCCCCEEEEcCCCC-CC------cHHHHHHHH------cCCCC
Q 018902 31 APAMSASVVRIVIVGDVHD--DWDLQED----SKALQLLKPDLVLFTGDFG-NE------NVEIVQSVA------ELEFP 91 (349)
Q Consensus 31 ~~~~~~~~mril~iSDlH~--~~~~~~~----~~~i~~~~pD~vI~~GDl~-~~------~~~~l~~l~------~l~~P 91 (349)
.|+..+..++|++++|.-. .+.+... -+..+..++|+||.+||-+ +. ...+-+.+. .+..|
T Consensus 36 ~p~~~dgslsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pSLQkp 115 (336)
T KOG2679|consen 36 DPAKSDGSLSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPSLQKP 115 (336)
T ss_pred CCCCCCCceEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhhhhhcccCcccccc
Confidence 3444567799999999964 3332111 1122357999999999944 21 123333333 34679
Q ss_pred EEEEcCCCCCCccccccccchhHHHHHHHHhCCcce---eeEEeecCCceEEEeCCeeee-----cCCchhhhhhhhhhc
Q 018902 92 KAVILGNHDSWKTQEFSGKKKDGVQLQLECLGEEHV---AYRRLDFPTLKLSIVGGRPFS-----CGGQQIFRKRLLSVR 163 (349)
Q Consensus 92 i~~V~GNHD~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~l~~~~~~i~~~g~~~~~-----~~g~~~~~~~~~~~~ 163 (349)
+|.|.||||+.+.-. +.+...++......+ .|. ++-.-+.+..++.++|. .+....+.-.-...+
T Consensus 116 Wy~vlGNHDyrGnV~------AQls~~l~~~d~RW~c~rsf~-~~ae~ve~f~v~~~~f~~d~~~~~~~~~ydw~~v~PR 188 (336)
T KOG2679|consen 116 WYSVLGNHDYRGNVE------AQLSPVLRKIDKRWICPRSFY-VDAEIVEMFFVDTTPFMDDTFTLCTDDVYDWRGVLPR 188 (336)
T ss_pred hhhhccCccccCchh------hhhhHHHHhhccceecccHHh-hcceeeeeeccccccchhhheecccccccccccCChH
Confidence 999999999876532 112212222111100 010 01111233334444433 111111110000001
Q ss_pred cCCcchHHHHHHHHHHHhCCCCCCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHhcCCCccEE
Q 018902 164 YGVQDMDESAKRIYKVALGTPDDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHG-DPDLAQAISLLKETTKLCIPLV 242 (349)
Q Consensus 164 ~~~~~~~~~~~~l~~~l~~~~~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G-~~~~~~al~~l~~~~~~~~~lv 242 (349)
..-....+.|+...+++. ..+++||+.|||.... +.|| ..++++.|..+++++ ++|+.
T Consensus 189 --~~~~~~~l~~le~~L~~S-~a~wkiVvGHh~i~S~----------------~~HG~T~eL~~~LlPiL~~n--~VdlY 247 (336)
T KOG2679|consen 189 --VKYLRALLSWLEVALKAS-RAKWKIVVGHHPIKSA----------------GHHGPTKELEKQLLPILEAN--GVDLY 247 (336)
T ss_pred --HHHHHHHHHHHHHHHHHh-hcceEEEecccceehh----------------hccCChHHHHHHHHHHHHhc--CCcEE
Confidence 111223344555555544 4678999999985433 3453 457889999999954 69999
Q ss_pred EeCccCCCcccCCcceEEEEEcCCceEEEeecccceeeccCCccCCCCCccccc-ccccCCCCCCceeeEEEEEEeCCeE
Q 018902 243 VFGHMHKELAYGNGLRKMIVVGADSTIYLNGAIVPRVKRLIDEQGADSSSVSNK-TSFLRPDSKGTVRAFTVVEILDGRI 321 (349)
Q Consensus 243 l~GH~H~~~~~~~g~~~~~~~~~~gt~yvn~g~~pr~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~f~~v~i~~~~v 321 (349)
++||.|.-+....- ..++-|+.+|...+..+...-. -.++++ -+|+-+. .+|.-+++...+.
T Consensus 248 ~nGHDHcLQhis~~--------e~~iqf~tSGagSkaw~g~~~~----~~~~p~~lkF~Ydg-----qGfmsv~is~~e~ 310 (336)
T KOG2679|consen 248 INGHDHCLQHISSP--------ESGIQFVTSGAGSKAWRGTDHN----PEVNPKELKFYYDG-----QGFMSVEISHSEA 310 (336)
T ss_pred EecchhhhhhccCC--------CCCeeEEeeCCcccccCCCccC----CccChhheEEeeCC-----CceEEEEEeccee
Confidence 99999998643311 1467788887765554331100 012222 3443332 5899999987665
Q ss_pred eEEEEEeee
Q 018902 322 DKIAERWII 330 (349)
Q Consensus 322 ~~~~~~~~~ 330 (349)
++ ++++
T Consensus 311 ~v---vfyD 316 (336)
T KOG2679|consen 311 RV---VFYD 316 (336)
T ss_pred EE---EEEe
Confidence 44 5554
|
|
| >KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.5e-11 Score=115.82 Aligned_cols=210 Identities=17% Similarity=0.194 Sum_probs=122.6
Q ss_pred CCCccEEEEEeCCCCCcChHHHHHHhh-CCCCCEEEEcCCCCC----------CcHHHHHHHHcCCCCEEEEcCCCCCCc
Q 018902 35 SASVVRIVIVGDVHDDWDLQEDSKALQ-LLKPDLVLFTGDFGN----------ENVEIVQSVAELEFPKAVILGNHDSWK 103 (349)
Q Consensus 35 ~~~~mril~iSDlH~~~~~~~~~~~i~-~~~pD~vI~~GDl~~----------~~~~~l~~l~~l~~Pi~~V~GNHD~~~ 103 (349)
.+.+.+++++||+-........+.... ..++|+||++|||.- +..+++|.++. .+|+.++.||||...
T Consensus 144 ~~~~~~~~i~GDlG~~~~~~s~~~~~~~~~k~d~vlhiGDlsYa~~~~n~~wD~f~r~vEp~As-~vPymv~~GNHE~d~ 222 (452)
T KOG1378|consen 144 QDSPTRAAIFGDMGCTEPYTSTLRNQEENLKPDAVLHIGDLSYAMGYSNWQWDEFGRQVEPIAS-YVPYMVCSGNHEIDW 222 (452)
T ss_pred ccCceeEEEEccccccccccchHhHHhcccCCcEEEEecchhhcCCCCccchHHHHhhhhhhhc-cCceEEecccccccC
Confidence 346789999999987665433333333 236999999999972 12346666665 789999999999876
Q ss_pred cccccccchhHHHHHHHHhCCc----ceeeEEeecCCceEEEeCCeeeecCCchhhhhhhhhhccCCcchHHHHHHHHHH
Q 018902 104 TQEFSGKKKDGVQLQLECLGEE----HVAYRRLDFPTLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMDESAKRIYKV 179 (349)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~~~~~----~~~~~~l~~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 179 (349)
..... ...+...+...++. .--|...+...+.+.++++.... +......|-.||.+.
T Consensus 223 ~~~~~---F~~y~~Rf~mP~~~s~s~~~l~YSfd~G~vhfv~lsse~~~----------------~~~~~~~QY~WL~~d 283 (452)
T KOG1378|consen 223 PPQPC---FVPYSARFNMPGNSSESDSNLYYSFDVGGVHFVVLSTETYY----------------NFLKGTAQYQWLERD 283 (452)
T ss_pred CCccc---ccccceeeccCCCcCCCCCceeEEEeeccEEEEEEeccccc----------------cccccchHHHHHHHH
Confidence 53210 01111111111110 00122233355555555553211 223344566888888
Q ss_pred HhCCCCC--CeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCH-HHHHHHHHHHHhcCCCccEEEeCccCCCcccCCc
Q 018902 180 ALGTPDD--HLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDP-DLAQAISLLKETTKLCIPLVVFGHMHKELAYGNG 256 (349)
Q Consensus 180 l~~~~~~--~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~-~~~~al~~l~~~~~~~~~lvl~GH~H~~~~~~~g 256 (349)
|++.++. .+.|++.|.|-+...... .. ..|.+ .+++.|+.++- ++++|++|.||.|...+..+-
T Consensus 284 L~~v~r~~tPWlIv~~HrP~Y~S~~~~--------~~---reG~~~~~~~~LE~l~~--~~~VDvvf~GHvH~YER~~pi 350 (452)
T KOG1378|consen 284 LASVDRKKTPWLIVQGHRPMYCSSNDA--------HY---REGEFESMREGLEPLFV--KYKVDVVFWGHVHRYERFCPI 350 (452)
T ss_pred HHHhcccCCCeEEEEecccceecCCch--------hh---ccCcchhhHHHHHHHHH--HhceeEEEeccceehhccchh
Confidence 8888764 678999998765442110 00 11322 23457888887 567999999999998542211
Q ss_pred ceEE--------EEEcCCceEEEeecccc
Q 018902 257 LRKM--------IVVGADSTIYLNGAIVP 277 (349)
Q Consensus 257 ~~~~--------~~~~~~gt~yvn~g~~p 277 (349)
.... ...++.+++|+..|...
T Consensus 351 yn~~~~~~~~~~~~~d~~aPvyI~~G~~G 379 (452)
T KOG1378|consen 351 YNNTCGTGWGPVHLVDGMAPIYITVGDGG 379 (452)
T ss_pred hcceeeccCCcccccCCCCCEEEEEccCC
Confidence 1111 12355677788777653
|
|
| >cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.40 E-value=3e-12 Score=108.10 Aligned_cols=61 Identities=31% Similarity=0.502 Sum_probs=40.8
Q ss_pred EEEeCCCCCcC-h--------------HHHHHHhhCCCCCEEEEcCCCCCCc--------HHHHHHHHcC-----CCCEE
Q 018902 42 VIVGDVHDDWD-L--------------QEDSKALQLLKPDLVLFTGDFGNEN--------VEIVQSVAEL-----EFPKA 93 (349)
Q Consensus 42 l~iSDlH~~~~-~--------------~~~~~~i~~~~pD~vI~~GDl~~~~--------~~~l~~l~~l-----~~Pi~ 93 (349)
+++||+|+... . +.+.+.++..+||+||++||++++. .+..+.+.++ ..|++
T Consensus 1 ~~isD~HL~~~~~~~~l~~~~~~~~~~~~~~~~i~~~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 80 (156)
T cd08165 1 MFLADTHLLGSILGHWLDKLRREWQMERSFQTSLWLLQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLH 80 (156)
T ss_pred CccccchhcCCcccHHHHHHhhhHHHHHHHHHHHHhcCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEE
Confidence 46899998321 1 1223455678999999999999742 1223333322 57999
Q ss_pred EEcCCCCCC
Q 018902 94 VILGNHDSW 102 (349)
Q Consensus 94 ~V~GNHD~~ 102 (349)
+|+||||..
T Consensus 81 ~v~GNHD~~ 89 (156)
T cd08165 81 VVVGNHDIG 89 (156)
T ss_pred EEcCCCCcC
Confidence 999999974
|
MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to |
| >cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.8e-10 Score=103.70 Aligned_cols=64 Identities=22% Similarity=0.284 Sum_probs=46.9
Q ss_pred cEEEEEeCCCCCcC-------h---HHHHHHhhCCCCC-EEEEcCCCCCCc--------HHHHHHHHcCCCCEEEEcCCC
Q 018902 39 VRIVIVGDVHDDWD-------L---QEDSKALQLLKPD-LVLFTGDFGNEN--------VEIVQSVAELEFPKAVILGNH 99 (349)
Q Consensus 39 mril~iSDlH~~~~-------~---~~~~~~i~~~~pD-~vI~~GDl~~~~--------~~~l~~l~~l~~Pi~~V~GNH 99 (349)
++|+++||+|+... . ..+++.+++..+| +++.+||+.+.. ...++.++.++. .++++|||
T Consensus 1 l~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~g~-d~~~~GNH 79 (252)
T cd00845 1 LTILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNALGY-DAVTIGNH 79 (252)
T ss_pred CEEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhcCC-CEEeeccc
Confidence 58999999996641 1 4567777777888 779999998642 346777776554 46778999
Q ss_pred CCCc
Q 018902 100 DSWK 103 (349)
Q Consensus 100 D~~~ 103 (349)
|+..
T Consensus 80 e~d~ 83 (252)
T cd00845 80 EFDY 83 (252)
T ss_pred cccc
Confidence 9753
|
This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich |
| >cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.8e-11 Score=97.37 Aligned_cols=59 Identities=29% Similarity=0.450 Sum_probs=43.7
Q ss_pred EEEeCCCCCcChHHHH---HHhhCCCCCEEEEcCCCCCCc----H-HH--HHHHHcCCCCEEEEcCCCC
Q 018902 42 VIVGDVHDDWDLQEDS---KALQLLKPDLVLFTGDFGNEN----V-EI--VQSVAELEFPKAVILGNHD 100 (349)
Q Consensus 42 l~iSDlH~~~~~~~~~---~~i~~~~pD~vI~~GDl~~~~----~-~~--l~~l~~l~~Pi~~V~GNHD 100 (349)
+++||+|.+....... ....+.++|+||++||+++.. . .. ...+.....|+++++||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce
Confidence 4799999997753322 455678999999999999752 1 11 2345556899999999999
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me |
| >PRK09968 serine/threonine-specific protein phosphatase 2; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.8e-11 Score=109.03 Aligned_cols=61 Identities=25% Similarity=0.422 Sum_probs=47.2
Q ss_pred EEEEEeCCCCCcCh-HHHHHHhh-CCCCCEEEEcCCCCCCc---HHHHHHHHcCCCCEEEEcCCCCCC
Q 018902 40 RIVIVGDVHDDWDL-QEDSKALQ-LLKPDLVLFTGDFGNEN---VEIVQSVAELEFPKAVILGNHDSW 102 (349)
Q Consensus 40 ril~iSDlH~~~~~-~~~~~~i~-~~~pD~vI~~GDl~~~~---~~~l~~l~~l~~Pi~~V~GNHD~~ 102 (349)
||+++||+|++... +++++.+. ..+.|.++++||++++. .++++.+.+ ..+++|.||||..
T Consensus 16 ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~--~~~~~v~GNHE~~ 81 (218)
T PRK09968 16 HIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ--PWFISVKGNHEAM 81 (218)
T ss_pred eEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh--CCcEEEECchHHH
Confidence 89999999999765 55566664 45789999999999854 566666654 2478999999964
|
|
| >cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.28 E-value=4.3e-11 Score=105.92 Aligned_cols=62 Identities=24% Similarity=0.375 Sum_probs=47.1
Q ss_pred EEEEEeCCCCCcCh-HHHHHHhhC-CCCCEEEEcCCCCCC---cHHHHHHHHcCCCCEEEEcCCCCCCc
Q 018902 40 RIVIVGDVHDDWDL-QEDSKALQL-LKPDLVLFTGDFGNE---NVEIVQSVAELEFPKAVILGNHDSWK 103 (349)
Q Consensus 40 ril~iSDlH~~~~~-~~~~~~i~~-~~pD~vI~~GDl~~~---~~~~l~~l~~l~~Pi~~V~GNHD~~~ 103 (349)
||+++||+|++... +++++.+.. .++|.++++||+++. ..++++.+.. .++++|.||||...
T Consensus 2 ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~--~~~~~v~GNhe~~~ 68 (207)
T cd07424 2 RDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLE--PWFHAVRGNHEQMA 68 (207)
T ss_pred CEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc--CCEEEeECCChHHH
Confidence 79999999998654 445555543 468999999999985 3566666654 36899999999653
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all |
| >cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.27 E-value=3.1e-11 Score=107.31 Aligned_cols=61 Identities=18% Similarity=0.067 Sum_probs=40.0
Q ss_pred EEEeCCCCCcCh---HHHHHHh-hC---CCCCEEEEcCCCCCCc-----------H---HHHHHHHcCCCCEEEEcCCCC
Q 018902 42 VIVGDVHDDWDL---QEDSKAL-QL---LKPDLVLFTGDFGNEN-----------V---EIVQSVAELEFPKAVILGNHD 100 (349)
Q Consensus 42 l~iSDlH~~~~~---~~~~~~i-~~---~~pD~vI~~GDl~~~~-----------~---~~l~~l~~l~~Pi~~V~GNHD 100 (349)
++|||+|++... ....... .. .++|.|+++||++|.. . ..+..+...+.++++|+||||
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~v~GNHD 80 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLADRGTRVYYVPGNHD 80 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHHHCCCeEEEECCCch
Confidence 489999998653 2222222 22 4899999999998620 1 112222234789999999999
Q ss_pred CC
Q 018902 101 SW 102 (349)
Q Consensus 101 ~~ 102 (349)
..
T Consensus 81 ~~ 82 (217)
T cd07398 81 FL 82 (217)
T ss_pred HH
Confidence 75
|
YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l |
| >cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.1e-09 Score=101.23 Aligned_cols=199 Identities=20% Similarity=0.184 Sum_probs=106.5
Q ss_pred cEEEEEeCCCCCcC-----------------hHHHHHHhhCCCCCEEEE-cCCCCCCc--------------HHHHHHHH
Q 018902 39 VRIVIVGDVHDDWD-----------------LQEDSKALQLLKPDLVLF-TGDFGNEN--------------VEIVQSVA 86 (349)
Q Consensus 39 mril~iSDlH~~~~-----------------~~~~~~~i~~~~pD~vI~-~GDl~~~~--------------~~~l~~l~ 86 (349)
++|++++|+|+... ...+++.+++..+|.+++ +||+++.. ...++.++
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln 80 (277)
T cd07410 1 LRILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMN 80 (277)
T ss_pred CeEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHH
Confidence 58999999998631 144567777778898887 99998643 23566777
Q ss_pred cCCCCEEEEcCCCCCCccccccccchhHHHHHHHHhCCcce---------------eeEEeecC-CceEEEeCCeeeecC
Q 018902 87 ELEFPKAVILGNHDSWKTQEFSGKKKDGVQLQLECLGEEHV---------------AYRRLDFP-TLKLSIVGGRPFSCG 150 (349)
Q Consensus 87 ~l~~Pi~~V~GNHD~~~~~~~~~~~~~~~~~~l~~~~~~~~---------------~~~~l~~~-~~~i~~~g~~~~~~~ 150 (349)
.++.. ++++||||+.... ..+...++..+...+ .|..++.. ++++.++|-..-.+.
T Consensus 81 ~~g~d-~~~lGNHe~d~g~-------~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~i~~~~~g~kVgviG~~~~~~~ 152 (277)
T cd07410 81 ALGYD-AGTLGNHEFNYGL-------DYLDKVIKQANFPVLSANVIDADTGEPFLKPYVILERDVGVKVGIIGLTTPQIP 152 (277)
T ss_pred hcCCC-EEeecccCcccCH-------HHHHHHHHhCCCCEEEEEEEeCCCCCcccCCEEEEEecCCCEEEEEecCCcccc
Confidence 76654 6677999975321 123333433321111 22233445 556655554211100
Q ss_pred CchhhhhhhhhhccCCcchHHHHHHHHHHHhCCCCCCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 018902 151 GQQIFRKRLLSVRYGVQDMDESAKRIYKVALGTPDDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISL 230 (349)
Q Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~ 230 (349)
. .............+..+.+.+..+++++ ...+..|+++|.+.... ... .+..+....+
T Consensus 153 ~---~~~~~~~~~~~~~d~~~~~~~~v~~lr~-~~~D~IIvl~H~g~~~~-----------~~~------~~~~~~~~~~ 211 (277)
T cd07410 153 N---WEKPNLIGGLKFTDPVETAKKYVPKLRA-EGADVVVVLAHGGFERD-----------LEE------SLTGENAAYE 211 (277)
T ss_pred c---ccCcccCCCcEEcCHHHHHHHHHHHHHH-cCCCEEEEEecCCcCCC-----------ccc------ccCCccHHHH
Confidence 0 0000000012223344445556666654 23467999999853211 000 0000122234
Q ss_pred HHHhcCCCccEEEeCccCCCcccCCcceEEEEEcCCceEEEeeccc
Q 018902 231 LKETTKLCIPLVVFGHMHKELAYGNGLRKMIVVGADSTIYLNGAIV 276 (349)
Q Consensus 231 l~~~~~~~~~lvl~GH~H~~~~~~~g~~~~~~~~~~gt~yvn~g~~ 276 (349)
++++. .++|+|++||.|..... ... ++++++.+|+-
T Consensus 212 la~~~-~~vD~IlgGHsH~~~~~----~~~-----~~~~v~q~g~~ 247 (277)
T cd07410 212 LAEEV-PGIDAILTGHQHRRFPG----PTV-----NGVPVVQPGNW 247 (277)
T ss_pred HHhcC-CCCcEEEeCCCcccccc----CCc-----CCEEEEcCChh
Confidence 44432 37999999999987321 122 67888888863
|
CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos |
| >cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.26 E-value=2e-09 Score=98.79 Aligned_cols=190 Identities=16% Similarity=0.176 Sum_probs=99.3
Q ss_pred cEEEEEeCCCCCcCh-----------------------HHHHHHhhCC-CCCEE-EEcCCCCCCc--------HHHHHHH
Q 018902 39 VRIVIVGDVHDDWDL-----------------------QEDSKALQLL-KPDLV-LFTGDFGNEN--------VEIVQSV 85 (349)
Q Consensus 39 mril~iSDlH~~~~~-----------------------~~~~~~i~~~-~pD~v-I~~GDl~~~~--------~~~l~~l 85 (349)
++|++++|+|+.... ..+++.+++. .+|.+ +.+||+++.. ...++.+
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l 80 (264)
T cd07411 1 LTLLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDAL 80 (264)
T ss_pred CEEEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHH
Confidence 479999999995211 3356666666 89977 5699998642 3456666
Q ss_pred HcCCCCEEEEcCCCCCCccccccccchhHHHHHHHHhCCcce---------------eeEEeecCCceEEEeCCeeeecC
Q 018902 86 AELEFPKAVILGNHDSWKTQEFSGKKKDGVQLQLECLGEEHV---------------AYRRLDFPTLKLSIVGGRPFSCG 150 (349)
Q Consensus 86 ~~l~~Pi~~V~GNHD~~~~~~~~~~~~~~~~~~l~~~~~~~~---------------~~~~l~~~~~~i~~~g~~~~~~~ 150 (349)
+.++ +.++.||||+.... ..+...++..+-..+ .+...+..++++.++|-..-...
T Consensus 81 ~~~g--~da~~GNHefd~g~-------~~l~~~~~~~~~~~l~aN~~~~~~~~~~~~~~~i~~~~g~kVgviG~~~~~~~ 151 (264)
T cd07411 81 NALG--VDAMVGHWEFTYGP-------ERVRELFGRLNWPFLAANVYDDEAGERVFPPYRIKEVGGVKIGVIGQTFPYVP 151 (264)
T ss_pred HhhC--CeEEecccccccCH-------HHHHHHHhhCCCCEEEEEEEeCCCCCcccCCEEEEEECCEEEEEEEeccCCcc
Confidence 6644 44444999975322 224444444332111 12233444555555554211110
Q ss_pred CchhhhhhhhhhccCCcchHHHHHHHHHHHhCCCCCCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 018902 151 GQQIFRKRLLSVRYGVQDMDESAKRIYKVALGTPDDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISL 230 (349)
Q Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~ 230 (349)
.. ........+...+..+.+.+....+.+....+..|+++|.+.. ++ . .
T Consensus 152 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iI~l~H~g~~-----------------------~~--~---~ 200 (264)
T cd07411 152 IA---NPPRFTPGLTFGIREEELQEVVVKLRREEGVDVVVLLSHNGLP-----------------------VD--V---E 200 (264)
T ss_pred cc---cCcCCCCCcEECCHHHHHHHHHHHHHHhCCCCEEEEEecCCch-----------------------hh--H---H
Confidence 00 0000000111123334444443444433445789999998521 11 1 2
Q ss_pred HHHhcCCCccEEEeCccCCCcccCCcceEEEEEcCCceEEEeeccc
Q 018902 231 LKETTKLCIPLVVFGHMHKELAYGNGLRKMIVVGADSTIYLNGAIV 276 (349)
Q Consensus 231 l~~~~~~~~~lvl~GH~H~~~~~~~g~~~~~~~~~~gt~yvn~g~~ 276 (349)
++++. .++|+++.||.|..... ..... ++++++.+|+.
T Consensus 201 la~~~-~~iDlilgGH~H~~~~~--~~~~~-----~~t~v~~~g~~ 238 (264)
T cd07411 201 LAERV-PGIDVILSGHTHERTPK--PIIAG-----GGTLVVEAGSH 238 (264)
T ss_pred HHhcC-CCCcEEEeCcccccccC--ccccc-----CCEEEEEcCcc
Confidence 22322 36999999999976211 11122 67888888863
|
SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy |
| >cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.2e-10 Score=102.84 Aligned_cols=62 Identities=21% Similarity=0.316 Sum_probs=43.7
Q ss_pred EEEeCCCCCcCh------HHHHHHhhCC-----CCCEEEEcCCCCCCc-------------------HHHHHHHHcC--C
Q 018902 42 VIVGDVHDDWDL------QEDSKALQLL-----KPDLVLFTGDFGNEN-------------------VEIVQSVAEL--E 89 (349)
Q Consensus 42 l~iSDlH~~~~~------~~~~~~i~~~-----~pD~vI~~GDl~~~~-------------------~~~l~~l~~l--~ 89 (349)
+++||+|++... +.+++.++.. ++|.||++||+++.. ..+.+.+.++ .
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~ 81 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPSH 81 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcccC
Confidence 689999986542 3455666544 569999999999741 1233444444 4
Q ss_pred CCEEEEcCCCCCCc
Q 018902 90 FPKAVILGNHDSWK 103 (349)
Q Consensus 90 ~Pi~~V~GNHD~~~ 103 (349)
+|+++++||||...
T Consensus 82 ~~v~~ipGNHD~~~ 95 (243)
T cd07386 82 IKIIIIPGNHDAVR 95 (243)
T ss_pred CeEEEeCCCCCccc
Confidence 88999999999854
|
The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera |
| >COG2908 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=99.26 E-value=2.7e-11 Score=106.45 Aligned_cols=60 Identities=20% Similarity=0.134 Sum_probs=42.9
Q ss_pred EEEeCCCCCcCh----HHHHHHhhCC--CCCEEEEcCCCCCC----------cHH---HHHHHHcCCCCEEEEcCCCCC
Q 018902 42 VIVGDVHDDWDL----QEDSKALQLL--KPDLVLFTGDFGNE----------NVE---IVQSVAELEFPKAVILGNHDS 101 (349)
Q Consensus 42 l~iSDlH~~~~~----~~~~~~i~~~--~pD~vI~~GDl~~~----------~~~---~l~~l~~l~~Pi~~V~GNHD~ 101 (349)
++|||+|++... .-+++.++.. +.|.+++.||+++. ..+ .++.+++-+.|+|+++||||.
T Consensus 1 lFISDlHL~~~~p~~t~~fl~Fl~~~a~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a~~G~~v~~i~GN~Df 79 (237)
T COG2908 1 LFISDLHLGPKRPALTAFFLDFLREEAAQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLARKGTRVYYIHGNHDF 79 (237)
T ss_pred CeeeccccCCCCcHHHHHHHHHHHhccccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHHhcCCeEEEecCchHH
Confidence 479999999543 3355566654 45999999999862 123 344445558999999999995
|
|
| >KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.2e-09 Score=98.26 Aligned_cols=72 Identities=32% Similarity=0.444 Sum_probs=50.6
Q ss_pred CCCCCccEEEEEeCCCCCcCh--------------------HHHH-HHhhCCCCCEEEEcCCCCCCc------HHHHHHH
Q 018902 33 AMSASVVRIVIVGDVHDDWDL--------------------QEDS-KALQLLKPDLVLFTGDFGNEN------VEIVQSV 85 (349)
Q Consensus 33 ~~~~~~mril~iSDlH~~~~~--------------------~~~~-~~i~~~~pD~vI~~GDl~~~~------~~~l~~l 85 (349)
-....++||++++|+|++... ..++ +-+..++||+|+++||+++.. ..+++.+
T Consensus 48 ~~~~g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g~~t~Da~~sl~kAv 127 (379)
T KOG1432|consen 48 FREDGTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFGHSTQDAATSLMKAV 127 (379)
T ss_pred ecCCCceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCcccccccHhHHHHHHHHh
Confidence 344678999999999997541 1123 344468999999999988641 2233333
Q ss_pred H---cCCCCEEEEcCCCCCCcc
Q 018902 86 A---ELEFPKAVILGNHDSWKT 104 (349)
Q Consensus 86 ~---~l~~Pi~~V~GNHD~~~~ 104 (349)
+ ..++|+.++.||||....
T Consensus 128 aP~I~~~IPwA~~lGNHDdes~ 149 (379)
T KOG1432|consen 128 APAIDRKIPWAAVLGNHDDESD 149 (379)
T ss_pred hhHhhcCCCeEEEecccccccc
Confidence 2 338999999999997654
|
|
| >PRK04036 DNA polymerase II small subunit; Validated | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.1e-09 Score=109.04 Aligned_cols=69 Identities=17% Similarity=0.236 Sum_probs=50.3
Q ss_pred CCCccEEEEEeCCCCCcCh------HHHHHHhh---------CCCCCEEEEcCCCCCCc-------------------HH
Q 018902 35 SASVVRIVIVGDVHDDWDL------QEDSKALQ---------LLKPDLVLFTGDFGNEN-------------------VE 80 (349)
Q Consensus 35 ~~~~mril~iSDlH~~~~~------~~~~~~i~---------~~~pD~vI~~GDl~~~~-------------------~~ 80 (349)
..+.++++++||+|.+... +.+++.++ ..++|.||++||+++.. ..
T Consensus 240 ~~~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~ 319 (504)
T PRK04036 240 KDEKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEA 319 (504)
T ss_pred CCCccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHH
Confidence 3566899999999987641 34566666 56899999999999730 12
Q ss_pred HHHHHHcC--CCCEEEEcCCCCCCc
Q 018902 81 IVQSVAEL--EFPKAVILGNHDSWK 103 (349)
Q Consensus 81 ~l~~l~~l--~~Pi~~V~GNHD~~~ 103 (349)
+.+.|.++ .+|++++|||||...
T Consensus 320 l~~~L~~L~~~i~V~~ipGNHD~~~ 344 (504)
T PRK04036 320 AAEYLKQIPEDIKIIISPGNHDAVR 344 (504)
T ss_pred HHHHHHhhhcCCeEEEecCCCcchh
Confidence 33444444 578999999999754
|
|
| >TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family | Back alignment and domain information |
|---|
Probab=99.22 E-value=2.1e-09 Score=104.03 Aligned_cols=72 Identities=21% Similarity=0.177 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHhCCCCCCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCccEEEeCccCC
Q 018902 170 DESAKRIYKVALGTPDDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHK 249 (349)
Q Consensus 170 ~~~~~~l~~~l~~~~~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~ 249 (349)
.++++||.+.|++. +++++||++||||+..+....+. ...+. .....+.+.++++++ .++.+||+||+|.
T Consensus 322 eeQL~WLeqeLa~a-~~k~VVVf~HHPp~s~g~~~~Dp-----~~pg~---~~~n~~eLldLL~~y-pnV~aVfsGHvH~ 391 (496)
T TIGR03767 322 QTQFKWIKDTLRAS-SDTLFVLFSHHTSWSMVNELTDP-----VDPGE---KRHLGTELVSLLLEH-PNVLAWVNGHTHS 391 (496)
T ss_pred HHHHHHHHHHHhcC-CCCCEEEEECCCCcccccccccc-----ccccc---cccCHHHHHHHHhcC-CCceEEEECCcCC
Confidence 45678898888875 45679999999987653322111 00000 001124566677733 2799999999998
Q ss_pred Cc
Q 018902 250 EL 251 (349)
Q Consensus 250 ~~ 251 (349)
..
T Consensus 392 n~ 393 (496)
T TIGR03767 392 NK 393 (496)
T ss_pred Cc
Confidence 73
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202. |
| >cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.22 E-value=5.2e-09 Score=95.72 Aligned_cols=185 Identities=20% Similarity=0.193 Sum_probs=101.9
Q ss_pred cEEEEEeCCCCCc-----------ChHHHHHHhhCCCCC-EEEEcCCCCCCc--------HHHHHHHHcCCCCEEEEcCC
Q 018902 39 VRIVIVGDVHDDW-----------DLQEDSKALQLLKPD-LVLFTGDFGNEN--------VEIVQSVAELEFPKAVILGN 98 (349)
Q Consensus 39 mril~iSDlH~~~-----------~~~~~~~~i~~~~pD-~vI~~GDl~~~~--------~~~l~~l~~l~~Pi~~V~GN 98 (349)
++|+|++|+|.-. ....+++.+++..+| +++.+||+++.. ...++.++.++.. ++++||
T Consensus 1 ~~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~~d-~~~~GN 79 (257)
T cd07406 1 FTILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALGVD-LACFGN 79 (257)
T ss_pred CeEEEEccceeecccCCCCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcCCc-EEeecc
Confidence 5899999999311 014466777767788 999999998642 3466777766543 668999
Q ss_pred CCCCccccccccchhHHHHHHHHhCCcce-----------------eeEEeecCCceEEEeCCeeeecCCchhhhhhhhh
Q 018902 99 HDSWKTQEFSGKKKDGVQLQLECLGEEHV-----------------AYRRLDFPTLKLSIVGGRPFSCGGQQIFRKRLLS 161 (349)
Q Consensus 99 HD~~~~~~~~~~~~~~~~~~l~~~~~~~~-----------------~~~~l~~~~~~i~~~g~~~~~~~g~~~~~~~~~~ 161 (349)
||+.... ..+.+.++..+-..+ .|..++..++++.++|-..-.+.. .. ....
T Consensus 80 Hefd~g~-------~~l~~~~~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG~~~~~~~~--~~--~~~~ 148 (257)
T cd07406 80 HEFDFGE-------DQLQKRLGESKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLGLVEEEWLE--TL--TIDP 148 (257)
T ss_pred cccccCH-------HHHHHHHhhCCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEEEecccccc--cc--cCCC
Confidence 9975321 224444433321111 223333445555555432111000 00 0001
Q ss_pred hccCCcchHHHHHHHHHHHhCCCCCCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCccE
Q 018902 162 VRYGVQDMDESAKRIYKVALGTPDDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPL 241 (349)
Q Consensus 162 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~l 241 (349)
......+..+.+.+..+.+.+. ..+..|+++|.+.. .. ..++++. .++|+
T Consensus 149 ~~~~~~d~~~~~~~~v~~~~~~-~~D~iVvl~H~g~~------------------------~d----~~la~~~-~~iD~ 198 (257)
T cd07406 149 EYVRYRDYVETARELVDELREQ-GADLIIALTHMRLP------------------------ND----KRLAREV-PEIDL 198 (257)
T ss_pred CcceEcCHHHHHHHHHHHHHhC-CCCEEEEEeccCch------------------------hh----HHHHHhC-CCCce
Confidence 1122234445455555555433 34678999998521 00 1233322 36999
Q ss_pred EEeCccCCCcccCCcceEEEEEcCCceEEEeecc
Q 018902 242 VVFGHMHKELAYGNGLRKMIVVGADSTIYLNGAI 275 (349)
Q Consensus 242 vl~GH~H~~~~~~~g~~~~~~~~~~gt~yvn~g~ 275 (349)
|+.||.|... .... ++++++.+|+
T Consensus 199 IlgGH~H~~~-----~~~~-----~~t~vv~~g~ 222 (257)
T cd07406 199 ILGGHDHEYI-----LVQV-----GGTPIVKSGS 222 (257)
T ss_pred EEecccceeE-----eeeE-----CCEEEEeCCc
Confidence 9999999873 1223 6788888776
|
CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th |
| >cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.7e-10 Score=98.76 Aligned_cols=61 Identities=25% Similarity=0.226 Sum_probs=45.3
Q ss_pred EEEeCCCCCcCh----------------HHHHHHhhCC--CCCEEEEcCCCCCCcH--HHHHHHHcCCCCEEEEcCCCCC
Q 018902 42 VIVGDVHDDWDL----------------QEDSKALQLL--KPDLVLFTGDFGNENV--EIVQSVAELEFPKAVILGNHDS 101 (349)
Q Consensus 42 l~iSDlH~~~~~----------------~~~~~~i~~~--~pD~vI~~GDl~~~~~--~~l~~l~~l~~Pi~~V~GNHD~ 101 (349)
.++||+|++... +++++.+++. ++|.||++||+++... ...+.+.+++.|+++|+||||.
T Consensus 2 ~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~l~~~~~~~~~v~GNHD~ 81 (168)
T cd07390 2 YFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGTELELLSRLNGRKHLIKGNHDS 81 (168)
T ss_pred eEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHHHHHHHHhCCCCeEEEeCCCCc
Confidence 579999998642 2345555543 7899999999998532 2356677777899999999996
Q ss_pred C
Q 018902 102 W 102 (349)
Q Consensus 102 ~ 102 (349)
.
T Consensus 82 ~ 82 (168)
T cd07390 82 S 82 (168)
T ss_pred h
Confidence 5
|
This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d |
| >cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.1e-10 Score=100.06 Aligned_cols=46 Identities=41% Similarity=0.603 Sum_probs=32.9
Q ss_pred HHHhhCCCCCEEEEcCCCCCCc--------HHHHHHHHcC---------CCCEEEEcCCCCCC
Q 018902 57 SKALQLLKPDLVLFTGDFGNEN--------VEIVQSVAEL---------EFPKAVILGNHDSW 102 (349)
Q Consensus 57 ~~~i~~~~pD~vI~~GDl~~~~--------~~~l~~l~~l---------~~Pi~~V~GNHD~~ 102 (349)
...++..+||+||++||+++.. .+..+.+.++ .+|+++|+||||..
T Consensus 38 ~~~i~~~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g 100 (171)
T cd07384 38 KTALQRLKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIG 100 (171)
T ss_pred HHHHHhcCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccC
Confidence 3455678999999999999852 1133333222 57899999999975
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit |
| >PRK11439 pphA serine/threonine protein phosphatase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.5e-10 Score=103.23 Aligned_cols=62 Identities=23% Similarity=0.349 Sum_probs=49.0
Q ss_pred cEEEEEeCCCCCcCh-HHHHHHhhCC-CCCEEEEcCCCCCCc---HHHHHHHHcCCCCEEEEcCCCCCC
Q 018902 39 VRIVIVGDVHDDWDL-QEDSKALQLL-KPDLVLFTGDFGNEN---VEIVQSVAELEFPKAVILGNHDSW 102 (349)
Q Consensus 39 mril~iSDlH~~~~~-~~~~~~i~~~-~pD~vI~~GDl~~~~---~~~l~~l~~l~~Pi~~V~GNHD~~ 102 (349)
.|++++||+|++... +++++.+... +.|.++++||++|+. .++++.+.+ ..++.|.||||..
T Consensus 17 ~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~--~~~~~v~GNHE~~ 83 (218)
T PRK11439 17 RHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEE--HWVRAVRGNHEQM 83 (218)
T ss_pred CeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHc--CCceEeeCchHHH
Confidence 489999999999875 6677777643 689999999999964 567777665 2468999999954
|
|
| >cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.18 E-value=2.7e-10 Score=98.65 Aligned_cols=48 Identities=27% Similarity=0.393 Sum_probs=34.7
Q ss_pred HHHHhhCCCCCEEEEcCCCCCCc-----H---HHHHHHHcC-----CCCEEEEcCCCCCCc
Q 018902 56 DSKALQLLKPDLVLFTGDFGNEN-----V---EIVQSVAEL-----EFPKAVILGNHDSWK 103 (349)
Q Consensus 56 ~~~~i~~~~pD~vI~~GDl~~~~-----~---~~l~~l~~l-----~~Pi~~V~GNHD~~~ 103 (349)
....++..+||+||++|||+|+. . +.++++.++ .+|+++|+||||...
T Consensus 34 ~~~a~~~l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG~ 94 (195)
T cd08166 34 YHLALNFVQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIGG 94 (195)
T ss_pred HHHHHhccCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcCC
Confidence 44566678999999999999852 2 233344332 478999999999763
|
A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R |
| >cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.17 E-value=7.3e-09 Score=94.74 Aligned_cols=63 Identities=24% Similarity=0.325 Sum_probs=45.4
Q ss_pred cEEEEEeCCCCCcC--------h---HHHHHHhhCCCCCEEEEcCCCCCCc--------HHHHHHHHcCCCCEEEEcCCC
Q 018902 39 VRIVIVGDVHDDWD--------L---QEDSKALQLLKPDLVLFTGDFGNEN--------VEIVQSVAELEFPKAVILGNH 99 (349)
Q Consensus 39 mril~iSDlH~~~~--------~---~~~~~~i~~~~pD~vI~~GDl~~~~--------~~~l~~l~~l~~Pi~~V~GNH 99 (349)
++|++++|+|.... . ..+++.+++.+.++++.+||+++.. ...++.++.++..+ +++|||
T Consensus 1 i~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~g~d~-~~~GNH 79 (257)
T cd07408 1 ITILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPISDLDKGETIIKIMNAVGYDA-VTPGNH 79 (257)
T ss_pred CEEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhcCCcE-Eccccc
Confidence 58999999998532 1 3455566544678999999998642 34667777766665 567999
Q ss_pred CCC
Q 018902 100 DSW 102 (349)
Q Consensus 100 D~~ 102 (349)
|+.
T Consensus 80 efd 82 (257)
T cd07408 80 EFD 82 (257)
T ss_pred ccc
Confidence 975
|
SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet |
| >cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.17 E-value=6.8e-10 Score=101.28 Aligned_cols=62 Identities=24% Similarity=0.312 Sum_probs=40.2
Q ss_pred EEEEeCCCCCcCh-HHHHHHhh---CCCCCEEEEcCCCCCC---c--------------HHHHHH---HHcCCCCEEEEc
Q 018902 41 IVIVGDVHDDWDL-QEDSKALQ---LLKPDLVLFTGDFGNE---N--------------VEIVQS---VAELEFPKAVIL 96 (349)
Q Consensus 41 il~iSDlH~~~~~-~~~~~~i~---~~~pD~vI~~GDl~~~---~--------------~~~l~~---l~~l~~Pi~~V~ 96 (349)
|++++|+|+.... -+.++.++ ..++|+||+|||+... . .++.+. +.+.+.|+++|.
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~ 80 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIG 80 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEEC
Confidence 5789999997543 11122332 3589999999999731 1 012222 233577889999
Q ss_pred CCCCCC
Q 018902 97 GNHDSW 102 (349)
Q Consensus 97 GNHD~~ 102 (349)
||||..
T Consensus 81 GNHE~~ 86 (262)
T cd00844 81 GNHEAS 86 (262)
T ss_pred CCCCCH
Confidence 999953
|
Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s |
| >cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.12 E-value=8.1e-10 Score=99.63 Aligned_cols=64 Identities=27% Similarity=0.363 Sum_probs=48.2
Q ss_pred cEEEEEeCCCCCcCh-HHHHHHhhC----------CCCCEEEEcCCCCCC---cHHHHHHHHcC--CCCEEEEcCCCCCC
Q 018902 39 VRIVIVGDVHDDWDL-QEDSKALQL----------LKPDLVLFTGDFGNE---NVEIVQSVAEL--EFPKAVILGNHDSW 102 (349)
Q Consensus 39 mril~iSDlH~~~~~-~~~~~~i~~----------~~pD~vI~~GDl~~~---~~~~l~~l~~l--~~Pi~~V~GNHD~~ 102 (349)
|||+++||+|++... +++++.+.- .+.|.+|++||++|+ ..++++.+.++ ...+++|.||||..
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~~~~~~~v~GNHE~~ 80 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVAAGAALCVPGNHDNK 80 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhhCCcEEEEECCcHHH
Confidence 689999999999875 556666631 136899999999996 35666666543 34688999999963
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp |
| >cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.1e-08 Score=92.97 Aligned_cols=64 Identities=23% Similarity=0.291 Sum_probs=44.0
Q ss_pred cEEEEEeCCCCCcC-------------------h---HHHHHHhhCCCCC-EEEEcCCCCCC--------cHHHHHHHHc
Q 018902 39 VRIVIVGDVHDDWD-------------------L---QEDSKALQLLKPD-LVLFTGDFGNE--------NVEIVQSVAE 87 (349)
Q Consensus 39 mril~iSDlH~~~~-------------------~---~~~~~~i~~~~pD-~vI~~GDl~~~--------~~~~l~~l~~ 87 (349)
++|++++|+|.... . ...++.+++..++ +++.+||+++. ....++.++.
T Consensus 1 l~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~ 80 (281)
T cd07409 1 LTILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNL 80 (281)
T ss_pred CEEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHh
Confidence 58999999997531 1 3355666666777 45559998864 2456677777
Q ss_pred CCCCEEEEcCCCCCCc
Q 018902 88 LEFPKAVILGNHDSWK 103 (349)
Q Consensus 88 l~~Pi~~V~GNHD~~~ 103 (349)
++..+. ++||||+..
T Consensus 81 ~g~D~~-~lGNHefd~ 95 (281)
T cd07409 81 LGYDAM-TLGNHEFDD 95 (281)
T ss_pred cCCCEE-EeccccccC
Confidence 777644 569999864
|
CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si |
| >TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.6e-08 Score=97.16 Aligned_cols=80 Identities=9% Similarity=-0.031 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHhCCCCCCeEEEEeccCCCCC-CCCCCCCCCC-CCCCCCCCCCCHHHHHHHHHHHHhcCCCccEEEeCcc
Q 018902 170 DESAKRIYKVALGTPDDHLVILLAHNGPSGL-GSEPNDICGK-DWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHM 247 (349)
Q Consensus 170 ~~~~~~l~~~l~~~~~~~~~Ilv~H~PP~~~-g~~~~~~~~~-d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~ 247 (349)
.++++||.+.|...+.+++.++++||+|... +....+.+.. +... ...........+|..+++++ .++.+|+|||+
T Consensus 331 ~eQLaWLe~~La~a~a~~p~VVV~hHpPi~t~gi~~md~w~~~~~~~-~~~L~n~~~~~eLlaLL~~h-PnVla~LsGHv 408 (492)
T TIGR03768 331 AKRWDWLKAELARGQADGQLMIIAAHIPIAVSPIGSEMEWWLGAADA-NPDLQNAVSLTGLVTTLQKY-PNLLMWIAGHR 408 (492)
T ss_pred HHHHHHHHHHHHhCcCCCceEEEEeCCCcccCCccchhhhccccccc-cccccccccHHHHHHHHhcC-CCeEEEEcCCc
Confidence 5678999999998876667788888888654 3222121110 0000 00000111123566777754 27999999999
Q ss_pred CCCc
Q 018902 248 HKEL 251 (349)
Q Consensus 248 H~~~ 251 (349)
|...
T Consensus 409 Hrn~ 412 (492)
T TIGR03768 409 HLNT 412 (492)
T ss_pred cccc
Confidence 9873
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes. |
| >KOG3947 consensus Phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.07 E-value=4.1e-09 Score=93.77 Aligned_cols=204 Identities=20% Similarity=0.226 Sum_probs=111.5
Q ss_pred CCccEEEEEeCCCCCcChHHHHHHhhCCCCCEEEEcCCCCCC-c----HHHHHHHHcCCC-CEEEEcCCCCCCccccccc
Q 018902 36 ASVVRIVIVGDVHDDWDLQEDSKALQLLKPDLVLFTGDFGNE-N----VEIVQSVAELEF-PKAVILGNHDSWKTQEFSG 109 (349)
Q Consensus 36 ~~~mril~iSDlH~~~~~~~~~~~i~~~~pD~vI~~GDl~~~-~----~~~l~~l~~l~~-Pi~~V~GNHD~~~~~~~~~ 109 (349)
....|++.+||+|.-.... .+ -..-|+++++||+++- . ..+-+.+.+++- -.++|.|||++.....+..
T Consensus 59 ~~~~r~VcisdtH~~~~~i---~~--~p~gDvlihagdfT~~g~~~ev~~fn~~~gslph~yKIVIaGNHELtFd~ef~~ 133 (305)
T KOG3947|consen 59 PGYARFVCISDTHELTFDI---ND--IPDGDVLIHAGDFTNLGLPEEVIKFNEWLGSLPHEYKIVIAGNHELTFDHEFMA 133 (305)
T ss_pred CCceEEEEecCcccccCcc---cc--CCCCceEEeccCCccccCHHHHHhhhHHhccCcceeeEEEeeccceeecccccc
Confidence 3457999999999875531 11 2577999999999972 2 334445555542 3689999999987653222
Q ss_pred cchh----HH-HHHHHHhC-----C---cceeeEEeecCCceEEEeCCeeeecCCchhhhhhhhhhccCCcchHHHHHHH
Q 018902 110 KKKD----GV-QLQLECLG-----E---EHVAYRRLDFPTLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMDESAKRI 176 (349)
Q Consensus 110 ~~~~----~~-~~~l~~~~-----~---~~~~~~~l~~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l 176 (349)
.... .+ ..-+..++ + ..-.+.+|....+.+. | +.+.|.+|... + .|.......-..+
T Consensus 134 ~~~k~~~~~~~~p~~s~l~P~a~egv~~lLTN~iYLqD~~vtv~--G---~~Iygspw~p~-~----~g~~f~l~rg~~~ 203 (305)
T KOG3947|consen 134 DLIKDEQDAYYFPGVSKLKPEAYEGVQSLLTNCIYLQDSEVTVR--G---VRIYGSPWTPL-L----PGWAFNLPRGQSL 203 (305)
T ss_pred hhhccccceecCccccccCccccccccchhceeEEEecCcEEEE--E---EEEecCCCCcc-c----CchhhhhhhhHhh
Confidence 1000 00 00001111 0 1113345555544432 2 33333333210 0 0000000001122
Q ss_pred HHHHhCCCCCCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCccEEEeCccCCCcccCCc
Q 018902 177 YKVALGTPDDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKELAYGNG 256 (349)
Q Consensus 177 ~~~l~~~~~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~~~~~g 256 (349)
.+....+ ++.-.+|++|.||.+.++... ..++...|+.++-..+++ +.++.+.++||+|.. .|
T Consensus 204 ld~W~~i-p~~iDvL~tHtPPlG~gd~~~-------~~~gqr~GC~ell~tVe~-----rvqpk~hVfGhvhe~----~G 266 (305)
T KOG3947|consen 204 LDKWNQI-PGGIDVLITHTPPLGHGDLVP-------VFSGQRNGCVELLNTVER-----RVQPKYHVFGHVHEG----HG 266 (305)
T ss_pred hHHHhcC-ccccceeccCCCCCCcchhcc-------cccCcccCHHHHHHhHhh-----ccccceEEeeeeecC----ce
Confidence 2333344 355689999999988754422 123445599877665554 235999999999998 45
Q ss_pred ceEEEEEcCCceEEEeeccc
Q 018902 257 LRKMIVVGADSTIYLNGAIV 276 (349)
Q Consensus 257 ~~~~~~~~~~gt~yvn~g~~ 276 (349)
+... +.+.|+|+...
T Consensus 267 vta~-----G~t~fina~~C 281 (305)
T KOG3947|consen 267 VTAD-----GYTTFINAELC 281 (305)
T ss_pred eeec-----CccccccHHHh
Confidence 4332 67889998764
|
|
| >KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.6e-08 Score=97.44 Aligned_cols=42 Identities=26% Similarity=0.360 Sum_probs=35.2
Q ss_pred CCccEEEEEeCCCCCcCh-------------HHHHHHhhCCCCCEEEEcCCCCCC
Q 018902 36 ASVVRIVIVGDVHDDWDL-------------QEDSKALQLLKPDLVLFTGDFGNE 77 (349)
Q Consensus 36 ~~~mril~iSDlH~~~~~-------------~~~~~~i~~~~pD~vI~~GDl~~~ 77 (349)
++.|||++.+|.|.++.. ++++..+...++|+|+..|||+++
T Consensus 11 entirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHe 65 (646)
T KOG2310|consen 11 ENTIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHE 65 (646)
T ss_pred ccceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCccccc
Confidence 567999999999998752 556666778899999999999975
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=99.02 E-value=4.3e-08 Score=107.10 Aligned_cols=199 Identities=17% Similarity=0.148 Sum_probs=108.5
Q ss_pred CCccEEEEEeCCCCCcCh----HHHHHHhhCCCCCEEEE-cCCCCCCc--------HHHHHHHHcCCCCEEEEcCCCCCC
Q 018902 36 ASVVRIVIVGDVHDDWDL----QEDSKALQLLKPDLVLF-TGDFGNEN--------VEIVQSVAELEFPKAVILGNHDSW 102 (349)
Q Consensus 36 ~~~mril~iSDlH~~~~~----~~~~~~i~~~~pD~vI~-~GDl~~~~--------~~~l~~l~~l~~Pi~~V~GNHD~~ 102 (349)
...++|++++|+|+.... ...++.+++.+||.|++ +||+++.. ...++.++.++. -++++||||+.
T Consensus 658 ~~~l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg~-d~~~~GNHEfd 736 (1163)
T PRK09419 658 NWELTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMGY-DASTFGNHEFD 736 (1163)
T ss_pred ceEEEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCcCC-CEEEecccccc
Confidence 355999999999976432 44667777778998877 99998753 346666766544 36699999985
Q ss_pred ccccccccchhHHHHHHHHhC------------Ccc-----------------eeeEEeecCCceEEEeCCeeeecCCch
Q 018902 103 KTQEFSGKKKDGVQLQLECLG------------EEH-----------------VAYRRLDFPTLKLSIVGGRPFSCGGQQ 153 (349)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~~------------~~~-----------------~~~~~l~~~~~~i~~~g~~~~~~~g~~ 153 (349)
... +.+...+...+ -.. ..|..++..++++.++|-..-.+..
T Consensus 737 ~g~-------~~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G~kIgiiGltt~~~~~-- 807 (1163)
T PRK09419 737 WGP-------DVLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNGKKVGFIGLTTPETAY-- 807 (1163)
T ss_pred cCh-------HHHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECCEEEEEEEeccccccc--
Confidence 432 12333333221 000 0223334444555555432100000
Q ss_pred hhhhhhhhhccCCcchHHHHHHHHHHHhCCCCCCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 018902 154 IFRKRLLSVRYGVQDMDESAKRIYKVALGTPDDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKE 233 (349)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~ 233 (349)
.............+..+...++.+++++....+..|+++|.+.... . . -+. .....+++
T Consensus 808 -~~~p~~~~~l~f~d~~e~~~~~v~~Lr~~~~~D~VV~LsH~G~~~d------~-----~-----~~~----~~~~~lA~ 866 (1163)
T PRK09419 808 -KTSPGNVKNLEFKDPAEAAKKWVKELKEKEKVDAIIALTHLGSNQD------R-----T-----TGE----ITGLELAK 866 (1163)
T ss_pred -ccCCCCcCCcEEcCHHHHHHHHHHHHHhhcCCCEEEEEecCCcccc------c-----c-----ccc----cHHHHHHH
Confidence 0000000012223444556666677764344567999999853111 0 0 000 11233444
Q ss_pred hcCCCccEEEeCccCCCcccCCcceEEEEEcCCceEEEeeccc
Q 018902 234 TTKLCIPLVVFGHMHKELAYGNGLRKMIVVGADSTIYLNGAIV 276 (349)
Q Consensus 234 ~~~~~~~lvl~GH~H~~~~~~~g~~~~~~~~~~gt~yvn~g~~ 276 (349)
+. .++|+++.||+|.... ... ++++++.+|+.
T Consensus 867 ~v-~gIDvIigGHsH~~~~-----~~v-----~~~~ivqag~~ 898 (1163)
T PRK09419 867 KV-KGVDAIISAHTHTLVD-----KVV-----NGTPVVQAYKY 898 (1163)
T ss_pred hC-CCCCEEEeCCCCcccc-----ccC-----CCEEEEeCChh
Confidence 33 2699999999998732 112 57888888764
|
|
| >cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.5e-09 Score=96.01 Aligned_cols=62 Identities=27% Similarity=0.355 Sum_probs=45.3
Q ss_pred EEEeCCCCCcCh-HHHHHHhh--------CCCCCEEEEcCCCCCCc---HHHHHHHHcC-------CCCEEEEcCCCCCC
Q 018902 42 VIVGDVHDDWDL-QEDSKALQ--------LLKPDLVLFTGDFGNEN---VEIVQSVAEL-------EFPKAVILGNHDSW 102 (349)
Q Consensus 42 l~iSDlH~~~~~-~~~~~~i~--------~~~pD~vI~~GDl~~~~---~~~l~~l~~l-------~~Pi~~V~GNHD~~ 102 (349)
+++||+|++... +++++.+. ..+.|.+|++||++|+. .++++.+.++ +.++++|+||||..
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 479999999764 55666554 24689999999999863 4455544333 46799999999975
Q ss_pred c
Q 018902 103 K 103 (349)
Q Consensus 103 ~ 103 (349)
.
T Consensus 81 ~ 81 (208)
T cd07425 81 N 81 (208)
T ss_pred H
Confidence 4
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal |
| >cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.98 E-value=2.3e-09 Score=92.04 Aligned_cols=61 Identities=18% Similarity=0.285 Sum_probs=42.9
Q ss_pred EEEeCCCCCcCh------------------HHHHHHhhCCCCCEEEEcCCCCCCc----HH---H--HHHHHcCCCCEEE
Q 018902 42 VIVGDVHDDWDL------------------QEDSKALQLLKPDLVLFTGDFGNEN----VE---I--VQSVAELEFPKAV 94 (349)
Q Consensus 42 l~iSDlH~~~~~------------------~~~~~~i~~~~pD~vI~~GDl~~~~----~~---~--l~~l~~l~~Pi~~ 94 (349)
+++||+|++... +++.+.+++.+||.||++||+++.. .+ . ...+...++|+++
T Consensus 1 l~isDlHlG~~~~~~~~g~~~p~~~~~~~~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 80 (172)
T cd07391 1 LVVADLHLGKEEELRRRGILLPRGQTEDTLERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVIL 80 (172)
T ss_pred CEeEeeccchHHHHHhcCCcCCcccHHHHHHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHHHHHHhccCCCeEEE
Confidence 589999998532 2344555678999999999999742 11 1 1223334789999
Q ss_pred EcCCCCCC
Q 018902 95 ILGNHDSW 102 (349)
Q Consensus 95 V~GNHD~~ 102 (349)
|+||||..
T Consensus 81 i~GNHD~~ 88 (172)
T cd07391 81 IRGNHDGG 88 (172)
T ss_pred EcccCccc
Confidence 99999964
|
This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro |
| >cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.3e-07 Score=88.01 Aligned_cols=64 Identities=20% Similarity=0.355 Sum_probs=44.4
Q ss_pred cEEEEEeCCCCCcC---------------hHHHHHHhhCCCCC-EEEEcCCCCCCc---------HHHHHHHHcCCCCEE
Q 018902 39 VRIVIVGDVHDDWD---------------LQEDSKALQLLKPD-LVLFTGDFGNEN---------VEIVQSVAELEFPKA 93 (349)
Q Consensus 39 mril~iSDlH~~~~---------------~~~~~~~i~~~~pD-~vI~~GDl~~~~---------~~~l~~l~~l~~Pi~ 93 (349)
++|++++|+|+... ...+++.+++..++ +++.+||+++.. ...++.++.++.- +
T Consensus 1 i~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g~D-a 79 (288)
T cd07412 1 VQILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMGVD-A 79 (288)
T ss_pred CeEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhCCe-e
Confidence 48999999997532 13456666655565 899999988642 2356677766655 4
Q ss_pred EEcCCCCCCc
Q 018902 94 VILGNHDSWK 103 (349)
Q Consensus 94 ~V~GNHD~~~ 103 (349)
.++||||+..
T Consensus 80 ~t~GNHefd~ 89 (288)
T cd07412 80 SAVGNHEFDE 89 (288)
T ss_pred eeeccccccc
Confidence 6779999753
|
YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi |
| >cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.93 E-value=4.6e-07 Score=84.12 Aligned_cols=65 Identities=15% Similarity=0.148 Sum_probs=43.0
Q ss_pred cEEEEEeCCCCCcCh-----------HHHHHHhhCC-----CCCEEEEcCCCCCCc--------HHHHHHHHcCCCCEEE
Q 018902 39 VRIVIVGDVHDDWDL-----------QEDSKALQLL-----KPDLVLFTGDFGNEN--------VEIVQSVAELEFPKAV 94 (349)
Q Consensus 39 mril~iSDlH~~~~~-----------~~~~~~i~~~-----~pD~vI~~GDl~~~~--------~~~l~~l~~l~~Pi~~ 94 (349)
++|++++|+|+.... ..+++.+++. +.-+++-+||++... ...++.++.++.-+.
T Consensus 1 ltIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g~Da~- 79 (285)
T cd07405 1 ITILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGYDAM- 79 (285)
T ss_pred CEEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhCCcEE-
Confidence 579999999996421 3455555432 334899999987532 345566776666544
Q ss_pred EcCCCCCCcc
Q 018902 95 ILGNHDSWKT 104 (349)
Q Consensus 95 V~GNHD~~~~ 104 (349)
++||||+...
T Consensus 80 ~~GNHEfD~G 89 (285)
T cd07405 80 AVGNHEFDNP 89 (285)
T ss_pred eecccccccC
Confidence 5599998643
|
UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs |
| >COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.90 E-value=4.3e-08 Score=80.15 Aligned_cols=63 Identities=19% Similarity=0.249 Sum_probs=44.1
Q ss_pred EEEEEeCCCCCcCh--------------HHHHHHhh-CCCC-CEEEEcCCCCC---CcHHHHHHHHcCCCCEEEEcCCCC
Q 018902 40 RIVIVGDVHDDWDL--------------QEDSKALQ-LLKP-DLVLFTGDFGN---ENVEIVQSVAELEFPKAVILGNHD 100 (349)
Q Consensus 40 ril~iSDlH~~~~~--------------~~~~~~i~-~~~p-D~vI~~GDl~~---~~~~~l~~l~~l~~Pi~~V~GNHD 100 (349)
.+.++||+|++... +.++.-.+ ..+| |.+.++||++- +..+..+.+.+++-.+..|+||||
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~~a~~IlerLnGrkhlv~GNhD 84 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRERAAGLILERLNGRKHLVPGNHD 84 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchhhHHHHHHHHcCCcEEEeeCCCC
Confidence 58899999997532 22333333 3344 78999999984 334555566677778899999999
Q ss_pred CC
Q 018902 101 SW 102 (349)
Q Consensus 101 ~~ 102 (349)
-.
T Consensus 85 k~ 86 (186)
T COG4186 85 KC 86 (186)
T ss_pred CC
Confidence 64
|
|
| >PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed | Back alignment and domain information |
|---|
Probab=98.83 E-value=7.6e-07 Score=90.19 Aligned_cols=68 Identities=16% Similarity=0.178 Sum_probs=45.2
Q ss_pred CCccEEEEEeCCCCCcCh-----------HHHHHHhhC-----CCCCEEEEcCCCCCC--------cHHHHHHHHcCCCC
Q 018902 36 ASVVRIVIVGDVHDDWDL-----------QEDSKALQL-----LKPDLVLFTGDFGNE--------NVEIVQSVAELEFP 91 (349)
Q Consensus 36 ~~~mril~iSDlH~~~~~-----------~~~~~~i~~-----~~pD~vI~~GDl~~~--------~~~~l~~l~~l~~P 91 (349)
...++|++++|+|+.... ..+++.+++ ...-+++.+||++.. ....++.++.++.-
T Consensus 32 ~~~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~g~D 111 (551)
T PRK09558 32 TYKITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIGYD 111 (551)
T ss_pred ceEEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcCCCC
Confidence 457899999999997531 234444442 223579999998764 23456667776665
Q ss_pred EEEEcCCCCCCcc
Q 018902 92 KAVILGNHDSWKT 104 (349)
Q Consensus 92 i~~V~GNHD~~~~ 104 (349)
+.++||||+...
T Consensus 112 -a~tlGNHEFD~G 123 (551)
T PRK09558 112 -AMAVGNHEFDNP 123 (551)
T ss_pred -EEcccccccCcC
Confidence 455699997643
|
|
| >PRK00166 apaH diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.1e-08 Score=94.08 Aligned_cols=64 Identities=25% Similarity=0.377 Sum_probs=52.6
Q ss_pred cEEEEEeCCCCCcCh-HHHHHHhh-CCCCCEEEEcCCCCCC---cHHHHHHHHcCCCCEEEEcCCCCCC
Q 018902 39 VRIVIVGDVHDDWDL-QEDSKALQ-LLKPDLVLFTGDFGNE---NVEIVQSVAELEFPKAVILGNHDSW 102 (349)
Q Consensus 39 mril~iSDlH~~~~~-~~~~~~i~-~~~pD~vI~~GDl~~~---~~~~l~~l~~l~~Pi~~V~GNHD~~ 102 (349)
|++++|||+|++... +++++.+. ..++|.++++||++++ ..++++.+.+++.++++|.||||..
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l~~~~~~VlGNHD~~ 69 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSLGDSAVTVLGNHDLH 69 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhcCCCeEEEecChhHH
Confidence 789999999999875 55666664 3478999999999985 4678888887777899999999973
|
|
| >KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.75 E-value=1.1e-06 Score=86.56 Aligned_cols=171 Identities=16% Similarity=0.212 Sum_probs=90.7
Q ss_pred HHHHHHhhC--CCCCEEEEcCCCCCCc-------------HHHHHHHHcC--CCCEEEEcCCCCCCccccccccc-----
Q 018902 54 QEDSKALQL--LKPDLVLFTGDFGNEN-------------VEIVQSVAEL--EFPKAVILGNHDSWKTQEFSGKK----- 111 (349)
Q Consensus 54 ~~~~~~i~~--~~pD~vI~~GDl~~~~-------------~~~l~~l~~l--~~Pi~~V~GNHD~~~~~~~~~~~----- 111 (349)
+..++.+.+ .++|+|+.+||+.... ..+.+.+.+. ++|||...||||..-...+....
T Consensus 198 es~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~F~~~~~~~~~ 277 (577)
T KOG3770|consen 198 ESALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNLFAPGSVPKRH 277 (577)
T ss_pred HHHHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhhcCCCCCcchh
Confidence 344555553 2499999999998521 1233333333 68999999999986544322211
Q ss_pred -hhHHHHHHHH------------hCCcceeeEEeecCCceEEEeCCeeeecCCchhhhhhhhhhccCCcchHHHHHHHHH
Q 018902 112 -KDGVQLQLEC------------LGEEHVAYRRLDFPTLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMDESAKRIYK 178 (349)
Q Consensus 112 -~~~~~~~l~~------------~~~~~~~~~~l~~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~ 178 (349)
...+.+.+.. .-.....|..+..+++++..++......... |. .....+...+++|+..
T Consensus 278 ~~~wly~~~~~~W~~wlp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~-~L-------~~n~tdp~~~lqWf~~ 349 (577)
T KOG3770|consen 278 SQLWLYKHLAGAWSTWLPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNF-WL-------YANQTDPIDQLQWFVD 349 (577)
T ss_pred hhhHHHHHHHhhhhccCCHHHHhhhhcCcEEEEeecCCceEEEeccccccccce-ee-------eecCCCchHHhhHHHH
Confidence 0001111110 0001123334444777777666532221110 00 0122334445778887
Q ss_pred HHhCCC-CCCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCccEEEeCccCCC
Q 018902 179 VALGTP-DDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKE 250 (349)
Q Consensus 179 ~l~~~~-~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~ 250 (349)
++..+. .+..+=+++|.||-. ..|.+.|.. .+-..+.++. .-+...++||+|.-
T Consensus 350 ~L~~ae~~GekVhil~HIPpG~------~~c~~~ws~--------~f~~iv~r~~----~tI~gqf~GH~h~d 404 (577)
T KOG3770|consen 350 QLQEAESAGEKVHILGHIPPGD------GVCLEGWSI--------NFYRIVNRFR----STIAGQFYGHTHID 404 (577)
T ss_pred HHHHHHhcCCEEEEEEeeCCCC------cchhhhhhH--------HHHHHHHHHH----HhhhhhccccCcce
Confidence 777653 345677999998832 334555553 2223344432 34777899999987
|
|
| >cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.74 E-value=2.7e-06 Score=78.71 Aligned_cols=66 Identities=15% Similarity=0.191 Sum_probs=42.3
Q ss_pred CccEEEEEeCCCCCcCh--------------HHHHHHh----hCCCCC-EEEEcCCCCCC----------cHHHHHHHHc
Q 018902 37 SVVRIVIVGDVHDDWDL--------------QEDSKAL----QLLKPD-LVLFTGDFGNE----------NVEIVQSVAE 87 (349)
Q Consensus 37 ~~mril~iSDlH~~~~~--------------~~~~~~i----~~~~pD-~vI~~GDl~~~----------~~~~l~~l~~ 87 (349)
..++|+|++|+|..... .++++.+ ++..++ +++.+||+++. .....+.++.
T Consensus 4 ~~ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~ 83 (282)
T cd07407 4 GDINFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRM 83 (282)
T ss_pred ceEEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHh
Confidence 45899999999975320 2233333 233555 66779998763 1335666665
Q ss_pred CCCCEEEEcCCCCCCc
Q 018902 88 LEFPKAVILGNHDSWK 103 (349)
Q Consensus 88 l~~Pi~~V~GNHD~~~ 103 (349)
++. =++++||||+..
T Consensus 84 mgy-Da~tlGNHEFd~ 98 (282)
T cd07407 84 MPY-DLLTIGNHELYN 98 (282)
T ss_pred cCC-cEEeecccccCc
Confidence 544 378999999853
|
YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at |
| >cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.7e-08 Score=87.45 Aligned_cols=42 Identities=31% Similarity=0.332 Sum_probs=29.1
Q ss_pred CCCCCEEEEcCCCCCCc----H-------HHHHHHHcC------------------CCCEEEEcCCCCCCc
Q 018902 62 LLKPDLVLFTGDFGNEN----V-------EIVQSVAEL------------------EFPKAVILGNHDSWK 103 (349)
Q Consensus 62 ~~~pD~vI~~GDl~~~~----~-------~~l~~l~~l------------------~~Pi~~V~GNHD~~~ 103 (349)
..+||.|++.|||+++. . ++.+.+..- .+|++.|+||||...
T Consensus 42 ~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHDIG~ 112 (193)
T cd08164 42 WLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHDVGY 112 (193)
T ss_pred hcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCcccCCC
Confidence 57999999999999742 1 122222111 278899999999753
|
Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the |
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.9e-06 Score=94.38 Aligned_cols=184 Identities=21% Similarity=0.248 Sum_probs=96.9
Q ss_pred CccEEEEEeCCCCCcCh-----------------HHHHHHhhCCCCCEEEE-cCCCCCCcH-----------------HH
Q 018902 37 SVVRIVIVGDVHDDWDL-----------------QEDSKALQLLKPDLVLF-TGDFGNENV-----------------EI 81 (349)
Q Consensus 37 ~~mril~iSDlH~~~~~-----------------~~~~~~i~~~~pD~vI~-~GDl~~~~~-----------------~~ 81 (349)
..++|++++|+|+.... ..+++.+++..++.+++ +||+++... ..
T Consensus 40 ~~l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~~ 119 (1163)
T PRK09419 40 VNIQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHPM 119 (1163)
T ss_pred eEEEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhhhHHhhhccccCCCcCHH
Confidence 56999999999986321 33566666667776555 999986431 24
Q ss_pred HHHHHcCCCCEEEEcCCCCCCccccccccchhHHHHHHHHhCCc--------------ceeeEEeec---------CCce
Q 018902 82 VQSVAELEFPKAVILGNHDSWKTQEFSGKKKDGVQLQLECLGEE--------------HVAYRRLDF---------PTLK 138 (349)
Q Consensus 82 l~~l~~l~~Pi~~V~GNHD~~~~~~~~~~~~~~~~~~l~~~~~~--------------~~~~~~l~~---------~~~~ 138 (349)
++.++.++.- ++++||||+.... +.+.+.+....-. .-.|..++. .+++
T Consensus 120 i~~mN~lgyD-a~~lGNHEFd~G~-------~~L~~~~~~a~fp~l~aNv~~~~~~~~~~py~I~~~~~~~~~g~~~gvk 191 (1163)
T PRK09419 120 IKAMNALGYD-AGTLGNHEFNYGL-------DFLDGTIKGANFPVLNANVKYKNGKNVYTPYKIKEKTVTDENGKKQGVK 191 (1163)
T ss_pred HHHHhhcCcc-EEeecccccccCH-------HHHHHHHhcCCCCEEEeeeecCCCCcccCCEEEEEEEeeccCCCCCCeE
Confidence 5555554443 5779999975332 1233333221100 012222332 4555
Q ss_pred EEEeCCeeeecCCchhhhhhhhhhccCCcchHHHHHHHHHHHhCCCCCCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCC
Q 018902 139 LSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMDESAKRIYKVALGTPDDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGD 218 (349)
Q Consensus 139 i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~ 218 (349)
+-++|-.+-.+. .| ............+..+.+.+..+++++. ..+..|+++|.+.... .. .
T Consensus 192 IgiiG~~~p~~~--~~-~~~~~~g~~~~~d~v~~~~~~v~~lk~~-gaDvII~l~H~G~~~~-----------~~----~ 252 (1163)
T PRK09419 192 VGYIGFVPPQIM--TW-DKKNLKGKVEVKNIVEEANKTIPEMKKG-GADVIVALAHSGIESE-----------YQ----S 252 (1163)
T ss_pred EEEEecCCcchh--hc-chhhccCcEEECCHHHHHHHHHHHHHhc-CCCEEEEEeccCcCCC-----------CC----C
Confidence 655554321110 01 1111111122345555566666666543 3467899999853111 00 0
Q ss_pred CCCHHHHHHHHHHHHhcCCCccEEEeCccCCCc
Q 018902 219 HGDPDLAQAISLLKETTKLCIPLVVFGHMHKEL 251 (349)
Q Consensus 219 ~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~ 251 (349)
.|. +.+...++++. .++|+++.||.|...
T Consensus 253 ~~~---en~~~~la~~~-~gID~Il~GHsH~~~ 281 (1163)
T PRK09419 253 SGA---EDSVYDLAEKT-KGIDAIVAGHQHGLF 281 (1163)
T ss_pred CCc---chHHHHHHHhC-CCCcEEEeCCCcccc
Confidence 111 13334455433 379999999999974
|
|
| >PHA02239 putative protein phosphatase | Back alignment and domain information |
|---|
Probab=98.67 E-value=3.9e-08 Score=88.50 Aligned_cols=64 Identities=22% Similarity=0.417 Sum_probs=47.1
Q ss_pred cEEEEEeCCCCCcCh-HHHHHHhhCC--CCCEEEEcCCCCCCc---HHHHHHHHcC---CCCEEEEcCCCCCC
Q 018902 39 VRIVIVGDVHDDWDL-QEDSKALQLL--KPDLVLFTGDFGNEN---VEIVQSVAEL---EFPKAVILGNHDSW 102 (349)
Q Consensus 39 mril~iSDlH~~~~~-~~~~~~i~~~--~pD~vI~~GDl~~~~---~~~l~~l~~l---~~Pi~~V~GNHD~~ 102 (349)
||+++|||+|++... +++++.++.. ..|.||++||++|+. .++++.+.++ +.++++|+||||..
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~~~~~~~~~l~GNHE~~ 73 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLMSNDDNVVTLLGNHDDE 73 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHhhcCCCeEEEECCcHHH
Confidence 689999999987653 5566666433 359999999999963 4455544332 45799999999964
|
|
| >COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=98.63 E-value=3.9e-07 Score=87.62 Aligned_cols=73 Identities=15% Similarity=0.242 Sum_probs=48.7
Q ss_pred CCCCCCCccEEEEEeCCCCCcCh------HHHHHHhhC-----CCCCEEEEcCCCCCC-------------------cHH
Q 018902 31 APAMSASVVRIVIVGDVHDDWDL------QEDSKALQL-----LKPDLVLFTGDFGNE-------------------NVE 80 (349)
Q Consensus 31 ~~~~~~~~mril~iSDlH~~~~~------~~~~~~i~~-----~~pD~vI~~GDl~~~-------------------~~~ 80 (349)
.+....+.++.+++||+|.+... ..+++.++. .+...++++||++|. ..+
T Consensus 218 ~~~~~~e~v~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~ 297 (481)
T COG1311 218 LNNTGDERVYVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEE 297 (481)
T ss_pred CCCCCCcceEEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHH
Confidence 33445677899999999997643 334444442 345789999999873 122
Q ss_pred HHHHHHcC--CCCEEEEcCCCCCCc
Q 018902 81 IVQSVAEL--EFPKAVILGNHDSWK 103 (349)
Q Consensus 81 ~l~~l~~l--~~Pi~~V~GNHD~~~ 103 (349)
+.+.|..+ .+.+++.|||||.-.
T Consensus 298 ~A~~L~~vp~~I~v~i~PGnhDa~r 322 (481)
T COG1311 298 LAEFLDQVPEHIKVFIMPGNHDAVR 322 (481)
T ss_pred HHHHHhhCCCCceEEEecCCCCccc
Confidence 33344444 356899999999754
|
|
| >cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.5e-07 Score=78.54 Aligned_cols=59 Identities=20% Similarity=0.310 Sum_probs=38.7
Q ss_pred EEEeCCCCCcCh-HHHHHHhh--CCCCCEEEEcCCCCCCcH------HHHHHHHcCCCCEEEEcCCCC
Q 018902 42 VIVGDVHDDWDL-QEDSKALQ--LLKPDLVLFTGDFGNENV------EIVQSVAELEFPKAVILGNHD 100 (349)
Q Consensus 42 l~iSDlH~~~~~-~~~~~~i~--~~~pD~vI~~GDl~~~~~------~~l~~l~~l~~Pi~~V~GNHD 100 (349)
++++|.|+.... -+-++.++ ..+.|++|++||++.... ++...-.+.++|+|++-|||+
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~~~~y~~g~~~~pipTyf~ggn~~ 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEELEAYKDGSKKVPIPTYFLGGNNP 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccchhhHHHHhcCCccCCCCEEEECCCCC
Confidence 578999998663 11222222 357899999999985321 222233345788999999996
|
CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site |
| >cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.5e-05 Score=72.41 Aligned_cols=63 Identities=22% Similarity=0.297 Sum_probs=46.4
Q ss_pred EEEEEeCCCCCcCh---HHHHHHhh-CCCCCEEEEcCCCCCC----cHHHHHHHHcCCCCEEEEcCCCCCCc
Q 018902 40 RIVIVGDVHDDWDL---QEDSKALQ-LLKPDLVLFTGDFGNE----NVEIVQSVAELEFPKAVILGNHDSWK 103 (349)
Q Consensus 40 ril~iSDlH~~~~~---~~~~~~i~-~~~pD~vI~~GDl~~~----~~~~l~~l~~l~~Pi~~V~GNHD~~~ 103 (349)
||++++|+=+..-. ...++.++ +.++|++|..||.... ..+..+.|..++.-++.+ |||++..
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G~D~iTl-GNH~fD~ 71 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAGVDVITM-GNHTWDK 71 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcCCCEEEe-cccccCc
Confidence 68999999886554 33444444 4579999999998653 367888888887776655 9998754
|
DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.5e-05 Score=82.99 Aligned_cols=67 Identities=15% Similarity=0.155 Sum_probs=44.4
Q ss_pred CCccEEEEEeCCCCCcCh-----------------HHHHHHhhCCCC-CEEEEcCCCCCCc-------------------
Q 018902 36 ASVVRIVIVGDVHDDWDL-----------------QEDSKALQLLKP-DLVLFTGDFGNEN------------------- 78 (349)
Q Consensus 36 ~~~mril~iSDlH~~~~~-----------------~~~~~~i~~~~p-D~vI~~GDl~~~~------------------- 78 (349)
.-.++|++++|+|..... ..+++.+++..+ -++|.+||+++..
T Consensus 37 ~~~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~ 116 (780)
T PRK09418 37 TVNLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGTPLGDYVANKINDPKKPVDP 116 (780)
T ss_pred ceEEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCchHHHHHhhccccccccccc
Confidence 346899999999996321 234566654444 4899999998642
Q ss_pred ---HHHHHHHHcCCCCEEEEcCCCCCCc
Q 018902 79 ---VEIVQSVAELEFPKAVILGNHDSWK 103 (349)
Q Consensus 79 ---~~~l~~l~~l~~Pi~~V~GNHD~~~ 103 (349)
...++.++.++.- ++.+||||+..
T Consensus 117 ~~~~p~i~~mN~lgyD-a~tlGNHEFdy 143 (780)
T PRK09418 117 SYTHPLYRLMNLMKYD-VISLGNHEFNY 143 (780)
T ss_pred ccchHHHHHHhccCCC-EEecccccccc
Confidence 1244555554443 68899999754
|
|
| >cd08162 MPP_PhoA_N Synechococcus sp | Back alignment and domain information |
|---|
Probab=98.57 E-value=3.7e-06 Score=79.01 Aligned_cols=65 Identities=20% Similarity=0.098 Sum_probs=43.2
Q ss_pred cEEEEEeCCCCCcCh-------HHHHHHhhCC----C-CCEEEEcCCCCCC----------------cHHHHHHHHcCCC
Q 018902 39 VRIVIVGDVHDDWDL-------QEDSKALQLL----K-PDLVLFTGDFGNE----------------NVEIVQSVAELEF 90 (349)
Q Consensus 39 mril~iSDlH~~~~~-------~~~~~~i~~~----~-pD~vI~~GDl~~~----------------~~~~l~~l~~l~~ 90 (349)
++|+|++|+|..... ..+++.+++. . .-+++.+||+++. ....++.++.++.
T Consensus 1 l~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g~ 80 (313)
T cd08162 1 LQLLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALGV 80 (313)
T ss_pred CeEEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccCC
Confidence 579999999997531 2345555432 3 3489999998763 2245566665554
Q ss_pred CEEEEcCCCCCCcc
Q 018902 91 PKAVILGNHDSWKT 104 (349)
Q Consensus 91 Pi~~V~GNHD~~~~ 104 (349)
- ++.+||||+...
T Consensus 81 D-a~tlGNHEFD~G 93 (313)
T cd08162 81 Q-AIALGNHEFDLG 93 (313)
T ss_pred c-EEeccccccccC
Confidence 3 678999997543
|
strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat |
| >COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.55 E-value=5.8e-06 Score=83.21 Aligned_cols=204 Identities=20% Similarity=0.159 Sum_probs=106.7
Q ss_pred CCCCccEEEEEeCCCCCcC------------h----HHHHHHhhCCC-CCEEEEcCCCCCC---------cHHHHHHHHc
Q 018902 34 MSASVVRIVIVGDVHDDWD------------L----QEDSKALQLLK-PDLVLFTGDFGNE---------NVEIVQSVAE 87 (349)
Q Consensus 34 ~~~~~mril~iSDlH~~~~------------~----~~~~~~i~~~~-pD~vI~~GDl~~~---------~~~~l~~l~~ 87 (349)
...-.++|+|++|+|.... . ..+++.+++.. ..++|-+||+.+. ....++.++.
T Consensus 22 ~~~~~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~ 101 (517)
T COG0737 22 AETVKLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNA 101 (517)
T ss_pred cCceeEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhh
Confidence 3355689999999999765 1 23455665544 4679999999874 2346666766
Q ss_pred CCCCEEEEcCCCCCCccccccccchhHHHHHHHHhCCc----------------ceeeEEeecCCceEEEeCCee-eecC
Q 018902 88 LEFPKAVILGNHDSWKTQEFSGKKKDGVQLQLECLGEE----------------HVAYRRLDFPTLKLSIVGGRP-FSCG 150 (349)
Q Consensus 88 l~~Pi~~V~GNHD~~~~~~~~~~~~~~~~~~l~~~~~~----------------~~~~~~l~~~~~~i~~~g~~~-~~~~ 150 (349)
++.- +...||||+..... .+.+.+....-. .-.|..++.+++++.++|-.. +...
T Consensus 102 m~yD-a~tiGNHEFd~g~~-------~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~KIgiIG~~~~~~~~ 173 (517)
T COG0737 102 LGYD-AMTLGNHEFDYGLE-------ALARLLDEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGVKIGIIGLTTPTIPT 173 (517)
T ss_pred cCCc-EEeecccccccCHH-------HHHHHHhccCCceEEeeeEecCCCCccCcCCeEEEecCCeEEEEEEecCCcccc
Confidence 5443 67889999875431 122222221111 013444555666777676431 1100
Q ss_pred CchhhhhhhhhhccCCcchHHHHHHHHHHHhCCCCCCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 018902 151 GQQIFRKRLLSVRYGVQDMDESAKRIYKVALGTPDDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISL 230 (349)
Q Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~ 230 (349)
|.... ........+..+.+.++.+++++.. -+..|+++|.+....... .+... +. +.
T Consensus 174 ---~~~~~-~~~~~~f~d~~e~~~~~i~elk~~~-vD~iI~LsH~G~~~d~~~-------~~~~~----~~------~~- 230 (517)
T COG0737 174 ---WEKPN-AIEGVTFRDPIEAAKKYIPELKGEG-VDVIIALSHLGIEDDLEL-------ASEVP----GD------VD- 230 (517)
T ss_pred ---ccccc-ccCCcEEcCHHHHHHHHHHHHHhcC-CCEEEEEeccCcCccccc-------ccccc----cc------cc-
Confidence 00000 0011222344455555666666543 457899999864221000 00000 00 00
Q ss_pred HHHhcCCCccEEEeCccCCCcccCCcceEEEEEcCCceEEEeeccc
Q 018902 231 LKETTKLCIPLVVFGHMHKELAYGNGLRKMIVVGADSTIYLNGAIV 276 (349)
Q Consensus 231 l~~~~~~~~~lvl~GH~H~~~~~~~g~~~~~~~~~~gt~yvn~g~~ 276 (349)
.. ..++|+++.||.|............ ++++++.+|..
T Consensus 231 ~~---~~~iD~i~~GH~H~~~~~~~~~~~~-----~~t~ivqag~~ 268 (517)
T COG0737 231 VA---VPGIDLIIGGHSHTVFPGGDKPGTV-----NGTPIVQAGEY 268 (517)
T ss_pred cc---ccCcceEeccCCcccccCCcccCcc-----CCEEEEccChh
Confidence 00 0139999999999652111100112 57888888864
|
|
| >KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=98.55 E-value=4.5e-07 Score=86.23 Aligned_cols=72 Identities=28% Similarity=0.335 Sum_probs=49.2
Q ss_pred CCccEEEEEeCCCCCc------------------ChHHHHHHhh-CCCCCEEEEcCCCCCCc--------HHHHHHHHcC
Q 018902 36 ASVVRIVIVGDVHDDW------------------DLQEDSKALQ-LLKPDLVLFTGDFGNEN--------VEIVQSVAEL 88 (349)
Q Consensus 36 ~~~mril~iSDlH~~~------------------~~~~~~~~i~-~~~pD~vI~~GDl~~~~--------~~~l~~l~~l 88 (349)
...+|++.++|.|+-- .+.+...... -.+||++++.|||+|+. .+..+++.++
T Consensus 46 ~n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkI 125 (410)
T KOG3662|consen 46 ENSTKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKI 125 (410)
T ss_pred CCceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHh
Confidence 4568999999999832 0122222222 46999999999999952 2234444443
Q ss_pred -----CCCEEEEcCCCCCCccccc
Q 018902 89 -----EFPKAVILGNHDSWKTQEF 107 (349)
Q Consensus 89 -----~~Pi~~V~GNHD~~~~~~~ 107 (349)
.+|++.|+||||.......
T Consensus 126 f~~k~~~~~~~i~GNhDIGf~~~~ 149 (410)
T KOG3662|consen 126 FGRKGNIKVIYIAGNHDIGFGNEL 149 (410)
T ss_pred hCCCCCCeeEEeCCcccccccccc
Confidence 5789999999999876543
|
|
| >PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.51 E-value=2.3e-05 Score=81.79 Aligned_cols=66 Identities=23% Similarity=0.203 Sum_probs=44.6
Q ss_pred ccEEEEEeCCCCCcCh-----------------HHHHHHhhCCCC-CEEEEcCCCCCCc-----------------HHHH
Q 018902 38 VVRIVIVGDVHDDWDL-----------------QEDSKALQLLKP-DLVLFTGDFGNEN-----------------VEIV 82 (349)
Q Consensus 38 ~mril~iSDlH~~~~~-----------------~~~~~~i~~~~p-D~vI~~GDl~~~~-----------------~~~l 82 (349)
.++|++++|+|..... ..+++.+++..+ -++|.+||++... ...+
T Consensus 115 ~LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i 194 (814)
T PRK11907 115 DVRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMY 194 (814)
T ss_pred EEEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHH
Confidence 5899999999986321 224566655444 3799999988641 1256
Q ss_pred HHHHcCCCCEEEEcCCCCCCcc
Q 018902 83 QSVAELEFPKAVILGNHDSWKT 104 (349)
Q Consensus 83 ~~l~~l~~Pi~~V~GNHD~~~~ 104 (349)
+.++.++.- ...+||||+...
T Consensus 195 ~amN~LGyD-A~tLGNHEFDyG 215 (814)
T PRK11907 195 AALEALGFD-AGTLGNHEFNYG 215 (814)
T ss_pred HHHhccCCC-EEEechhhcccC
Confidence 666665543 688999997643
|
|
| >TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.9e-07 Score=83.47 Aligned_cols=63 Identities=19% Similarity=0.231 Sum_probs=45.6
Q ss_pred EEEEEeCCCCCcCh--------------HH----HHHHhhCCCCCEEEEcCCCCCC------cHHHHHHHHcCCCCEEEE
Q 018902 40 RIVIVGDVHDDWDL--------------QE----DSKALQLLKPDLVLFTGDFGNE------NVEIVQSVAELEFPKAVI 95 (349)
Q Consensus 40 ril~iSDlH~~~~~--------------~~----~~~~i~~~~pD~vI~~GDl~~~------~~~~l~~l~~l~~Pi~~V 95 (349)
+.+++||+|++... .+ +.+.+...+||.||++||+++. ..++.+.+.++..++++|
T Consensus 16 ~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~~~~v~~V 95 (225)
T TIGR00024 16 DKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVTFRDLILI 95 (225)
T ss_pred CeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhcCCcEEEE
Confidence 58999999997532 12 2333445689999999999863 223445666667799999
Q ss_pred cCCCCCC
Q 018902 96 LGNHDSW 102 (349)
Q Consensus 96 ~GNHD~~ 102 (349)
+||||..
T Consensus 96 ~GNHD~~ 102 (225)
T TIGR00024 96 RGNHDAL 102 (225)
T ss_pred CCCCCCc
Confidence 9999964
|
Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal. |
| >TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.9e-07 Score=85.29 Aligned_cols=64 Identities=27% Similarity=0.403 Sum_probs=51.9
Q ss_pred cEEEEEeCCCCCcCh-HHHHHHhh-CCCCCEEEEcCCCCCC---cHHHHHHHHcCCCCEEEEcCCCCCC
Q 018902 39 VRIVIVGDVHDDWDL-QEDSKALQ-LLKPDLVLFTGDFGNE---NVEIVQSVAELEFPKAVILGNHDSW 102 (349)
Q Consensus 39 mril~iSDlH~~~~~-~~~~~~i~-~~~pD~vI~~GDl~~~---~~~~l~~l~~l~~Pi~~V~GNHD~~ 102 (349)
|++.+|||+|++... +++++.+. ....|.++++||++++ ..++++.+.+++..++.|.||||..
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l~~~~~~VlGNHD~~ 69 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSLGDAVRLVLGNHDLH 69 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCCeEEEEChhHHH
Confidence 578999999999875 67788776 3467999999999986 4577777777666678999999963
|
Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. |
| >cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.48 E-value=2.4e-07 Score=84.27 Aligned_cols=62 Identities=26% Similarity=0.388 Sum_probs=50.0
Q ss_pred EEEEeCCCCCcCh-HHHHHHhhC-CCCCEEEEcCCCCCC---cHHHHHHHHcCCCCEEEEcCCCCCC
Q 018902 41 IVIVGDVHDDWDL-QEDSKALQL-LKPDLVLFTGDFGNE---NVEIVQSVAELEFPKAVILGNHDSW 102 (349)
Q Consensus 41 il~iSDlH~~~~~-~~~~~~i~~-~~pD~vI~~GDl~~~---~~~~l~~l~~l~~Pi~~V~GNHD~~ 102 (349)
+.+|||+|++... +++++.+.- .+.|.++++||++++ ..++++.+.++...++.|+||||..
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~~~v~~VlGNHD~~ 67 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLGDSAKTVLGNHDLH 67 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcCCCeEEEcCCchHH
Confidence 3689999999765 667777753 368999999999986 4677888777766799999999964
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa |
| >KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=98.45 E-value=4.2e-05 Score=62.24 Aligned_cols=78 Identities=23% Similarity=0.356 Sum_probs=53.2
Q ss_pred CCCHHHHHHHHHHHHhcCCCccEEEeCccCCCcccCCcceEEEEEcCCceEEEeecccceeeccCCccCCCCCccccccc
Q 018902 219 HGDPDLAQAISLLKETTKLCIPLVVFGHMHKELAYGNGLRKMIVVGADSTIYLNGAIVPRVKRLIDEQGADSSSVSNKTS 298 (349)
Q Consensus 219 ~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~~~~~g~~~~~~~~~~gt~yvn~g~~pr~~~~~~~~~~~~~~~~~~~~ 298 (349)
||+++.-..|.+ +-.+|..+.||+|....| +. +|..|+|||+...... +|+..
T Consensus 93 ~gd~~sL~~LaR-----qldvDILl~G~Th~f~Ay-----e~-----eg~ffvnPGSaTGAfn-----------~~~t~- 145 (183)
T KOG3325|consen 93 WGDPESLALLAR-----QLDVDILLTGHTHKFEAY-----EH-----EGKFFVNPGSATGAFN-----------VSDTD- 145 (183)
T ss_pred CCCHHHHHHHHH-----hcCCcEEEeCCceeEEEE-----Ee-----CCcEEeCCCcccCCCc-----------ccccC-
Confidence 566755444443 446999999999998332 23 6899999998633221 11111
Q ss_pred ccCCCCCCceeeEEEEEEeCCeEeEEEEEeee
Q 018902 299 FLRPDSKGTVRAFTVVEILDGRIDKIAERWII 330 (349)
Q Consensus 299 ~~~~~~~~~~~~f~~v~i~~~~v~~~~~~~~~ 330 (349)
.-.++|++.+|....++.+..+.++
T Consensus 146 -------~~~PSFvLmDiqg~~~v~YvY~lid 170 (183)
T KOG3325|consen 146 -------IIVPSFVLMDIQGSTVVTYVYRLID 170 (183)
T ss_pred -------CCCCceEEEEecCCEEEEEEeeeeC
Confidence 1346899999999999888877765
|
|
| >TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase | Back alignment and domain information |
|---|
Probab=98.44 E-value=3.7e-05 Score=78.89 Aligned_cols=65 Identities=20% Similarity=0.183 Sum_probs=43.2
Q ss_pred ccEEEEEeCCCCCcCh-----------------HHHHHHhhCCCC-CEEEEcCCCCCCc----------------HHHHH
Q 018902 38 VVRIVIVGDVHDDWDL-----------------QEDSKALQLLKP-DLVLFTGDFGNEN----------------VEIVQ 83 (349)
Q Consensus 38 ~mril~iSDlH~~~~~-----------------~~~~~~i~~~~p-D~vI~~GDl~~~~----------------~~~l~ 83 (349)
.++|++++|+|..... ..+++.+++..+ -++|-+||+++.. ...++
T Consensus 2 ~l~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~ 81 (626)
T TIGR01390 2 DLRIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYK 81 (626)
T ss_pred eEEEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHH
Confidence 4799999999996321 234555554433 4789999988742 12455
Q ss_pred HHHcCCCCEEEEcCCCCCCc
Q 018902 84 SVAELEFPKAVILGNHDSWK 103 (349)
Q Consensus 84 ~l~~l~~Pi~~V~GNHD~~~ 103 (349)
.++.++.- ...+||||+..
T Consensus 82 ~mN~lgyD-a~tlGNHEFd~ 100 (626)
T TIGR01390 82 AMNLLKYD-VGNLGNHEFNY 100 (626)
T ss_pred HHhhcCcc-EEecccccccc
Confidence 56655443 58899999754
|
2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a |
| >PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=3.6e-07 Score=82.94 Aligned_cols=64 Identities=23% Similarity=0.370 Sum_probs=46.3
Q ss_pred cEEEEEeCCCCCcCh-HHHHHHhhC---------CCCCEEEEcCCCCCCc---HHHHHHHHcC--CCCEEEEcCCCCCC
Q 018902 39 VRIVIVGDVHDDWDL-QEDSKALQL---------LKPDLVLFTGDFGNEN---VEIVQSVAEL--EFPKAVILGNHDSW 102 (349)
Q Consensus 39 mril~iSDlH~~~~~-~~~~~~i~~---------~~pD~vI~~GDl~~~~---~~~l~~l~~l--~~Pi~~V~GNHD~~ 102 (349)
||+.+|||+|++... +++++.+.- .+-|.+|++||++|+. .++++.+.++ ...+++|.||||..
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~~~~~~~~l~GNHE~~ 79 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELVEKKAAYYVPGNHCNK 79 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHhhCCCEEEEeCccHHH
Confidence 689999999998764 556665532 1347999999999963 4555544433 34699999999953
|
|
| >PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.39 E-value=6.1e-05 Score=77.51 Aligned_cols=66 Identities=20% Similarity=0.217 Sum_probs=44.7
Q ss_pred CccEEEEEeCCCCCcCh-----------------HHHHHHhhCCCC-CEEEEcCCCCCCcH----------------HHH
Q 018902 37 SVVRIVIVGDVHDDWDL-----------------QEDSKALQLLKP-DLVLFTGDFGNENV----------------EIV 82 (349)
Q Consensus 37 ~~mril~iSDlH~~~~~-----------------~~~~~~i~~~~p-D~vI~~GDl~~~~~----------------~~l 82 (349)
..++|++++|+|..... ..+++.+++..+ -++|-+||+++... ..+
T Consensus 24 ~~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~i 103 (649)
T PRK09420 24 VDLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPVY 103 (649)
T ss_pred ceEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchHH
Confidence 46999999999986321 335566654444 47899999987421 245
Q ss_pred HHHHcCCCCEEEEcCCCCCCc
Q 018902 83 QSVAELEFPKAVILGNHDSWK 103 (349)
Q Consensus 83 ~~l~~l~~Pi~~V~GNHD~~~ 103 (349)
+.++.++. =...+||||+..
T Consensus 104 ~amN~lgy-Da~tlGNHEFd~ 123 (649)
T PRK09420 104 KAMNTLDY-DVGNLGNHEFNY 123 (649)
T ss_pred HHHHhcCC-cEEeccchhhhc
Confidence 66666554 368899999754
|
|
| >TIGR00282 metallophosphoesterase, MG_246/BB_0505 family | Back alignment and domain information |
|---|
Probab=98.36 E-value=2.2e-05 Score=71.74 Aligned_cols=185 Identities=14% Similarity=0.161 Sum_probs=101.7
Q ss_pred cEEEEEeCCCCCcCh---HHHHHHhh-CCCCCEEEEcCCCCCC----cHHHHHHHHcCCCCEEEEcCCCCCCcccccccc
Q 018902 39 VRIVIVGDVHDDWDL---QEDSKALQ-LLKPDLVLFTGDFGNE----NVEIVQSVAELEFPKAVILGNHDSWKTQEFSGK 110 (349)
Q Consensus 39 mril~iSDlH~~~~~---~~~~~~i~-~~~pD~vI~~GDl~~~----~~~~l~~l~~l~~Pi~~V~GNHD~~~~~~~~~~ 110 (349)
|||++++|+=+..-. ...+..++ +.++|++|..||.... ..+..+.|.+.++-++.+ |||.+.......
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~GvDviT~-GNH~~Dkge~~~-- 77 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQSGVNYITM-GNHTWFQKLILD-- 77 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhcCCCEEEc-cchhccCcHHHH--
Confidence 799999999876432 33444444 4578999999998753 367888898888887777 999975432000
Q ss_pred chhHHHHHHHHhC----CcceeeEEeecCCceEEEeCCeeeecCCchhhhhhhhhhccCCcchHHHHHHHHHHHhCCCCC
Q 018902 111 KKDGVQLQLECLG----EEHVAYRRLDFPTLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMDESAKRIYKVALGTPDD 186 (349)
Q Consensus 111 ~~~~~~~~l~~~~----~~~~~~~~l~~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 186 (349)
......+.++... ....++..++.++.++.+++. .|..+. . .+..++.....+++.+.+++. .
T Consensus 78 ~i~~~~~~lrpanyp~~~pG~g~~i~~~nG~kiaVinl-----~G~~fm-~-----~~~~~~Pf~~~d~~i~~lk~~--~ 144 (266)
T TIGR00282 78 VVINQKDLVRPLNFDTSFAGKGSLVFEFNGAKIAVTNL-----QGTSVN-L-----PFKTTNPFKVLKELINMLKKD--C 144 (266)
T ss_pred HHhccccccccCCCCCCCCCCCcEEEEECCEEEEEEEC-----CCcccC-C-----ccccCCHHHHHHHHHHhhhcC--C
Confidence 0000001111111 001122333333434433332 121110 0 011233333445555554432 3
Q ss_pred CeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCccEEEeCccCCCcccCCcceEEEEEcCC
Q 018902 187 HLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKELAYGNGLRKMIVVGAD 266 (349)
Q Consensus 187 ~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~~~~~g~~~~~~~~~~ 266 (349)
+..||..|..- .--.+++..+++ .++++|+.-|+|-.. .-.++ =++
T Consensus 145 d~IIVd~Haea------------------------tsEK~a~~~~ld---g~vsaVvGtHtHV~T----aD~~i---l~~ 190 (266)
T TIGR00282 145 DLIFVDFHAET------------------------TSEKNAFGMAFD---GYVTAVVGTHTHVPT----ADLRI---LPK 190 (266)
T ss_pred CEEEEEeCCCC------------------------HHHHHHHHHHhC---CCccEEEeCCCCCCC----Cccee---CCC
Confidence 57889999731 122356666775 479999999999983 22233 236
Q ss_pred ceEEEee
Q 018902 267 STIYLNG 273 (349)
Q Consensus 267 gt~yvn~ 273 (349)
||.|+.-
T Consensus 191 gtayitD 197 (266)
T TIGR00282 191 GTAYITD 197 (266)
T ss_pred CCEEEec
Confidence 8888754
|
A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase. |
| >TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN | Back alignment and domain information |
|---|
Probab=98.33 E-value=3.4e-05 Score=78.14 Aligned_cols=65 Identities=22% Similarity=0.232 Sum_probs=42.9
Q ss_pred cEEEEEeCCCCCcCh----------------------HHHHHHhhCCCC-CEEEEcCCCCCCc--------HHHHHHHHc
Q 018902 39 VRIVIVGDVHDDWDL----------------------QEDSKALQLLKP-DLVLFTGDFGNEN--------VEIVQSVAE 87 (349)
Q Consensus 39 mril~iSDlH~~~~~----------------------~~~~~~i~~~~p-D~vI~~GDl~~~~--------~~~l~~l~~ 87 (349)
++|+|++|+|+.... ...++.+++..+ -+++.+||.+... ...++.++.
T Consensus 1 ltILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~ 80 (550)
T TIGR01530 1 LSIIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAESKNALVLHAGDAIIGTLYFTLFGGRADAALMNA 80 (550)
T ss_pred CEEEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccchhhcCCHHHHHHHhc
Confidence 579999999985311 223555554444 4788999987642 335666665
Q ss_pred CCCCEEEEcCCCCCCcc
Q 018902 88 LEFPKAVILGNHDSWKT 104 (349)
Q Consensus 88 l~~Pi~~V~GNHD~~~~ 104 (349)
++. -+.++||||+...
T Consensus 81 ~g~-Da~~lGNHEFd~G 96 (550)
T TIGR01530 81 AGF-DFFTLGNHEFDAG 96 (550)
T ss_pred cCC-CEEEeccccccCC
Confidence 544 3789999997643
|
This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc. |
| >cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.30 E-value=1e-06 Score=78.72 Aligned_cols=61 Identities=21% Similarity=0.278 Sum_probs=45.7
Q ss_pred EEEeCCCCCcCh-HHHHHHhhCC--------CCCEEEEcCCCCCC---cHHHHHHHHcC--CCCEEEEcCCCCCC
Q 018902 42 VIVGDVHDDWDL-QEDSKALQLL--------KPDLVLFTGDFGNE---NVEIVQSVAEL--EFPKAVILGNHDSW 102 (349)
Q Consensus 42 l~iSDlH~~~~~-~~~~~~i~~~--------~pD~vI~~GDl~~~---~~~~l~~l~~l--~~Pi~~V~GNHD~~ 102 (349)
.+|||+|++... +++++.+... ..|.+|++||++|+ ..++++.+.++ +..+++|.||||..
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~~~~~~~~l~GNHE~~ 76 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMVDAGHALAVMGNHEFN 76 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhhcCCCEEEEEccCcHH
Confidence 689999999875 5666766422 46899999999986 35666666554 23589999999964
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of |
| >cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.28 E-value=1.2e-06 Score=78.30 Aligned_cols=62 Identities=23% Similarity=0.391 Sum_probs=47.5
Q ss_pred EEEeCCCCCcCh-HHHHHHhhCCCCCEEEEcCCCCCC---cHHHHHHHHcC---CCCEEEEcCCCCCCc
Q 018902 42 VIVGDVHDDWDL-QEDSKALQLLKPDLVLFTGDFGNE---NVEIVQSVAEL---EFPKAVILGNHDSWK 103 (349)
Q Consensus 42 l~iSDlH~~~~~-~~~~~~i~~~~pD~vI~~GDl~~~---~~~~l~~l~~l---~~Pi~~V~GNHD~~~ 103 (349)
.++||+|++... .++++.+...+.|.+|++||++++ ..++++.+..+ +.++++|.||||...
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~~~~~~~l~GNHe~~~ 69 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSVEVIDLLLALKILPDNVILLRGNHEDML 69 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcHHHHHHHHHhcCCCCcEEEEccCchhhh
Confidence 379999998654 456666666688999999999985 45666666655 347999999999753
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate |
| >cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.20 E-value=2.7e-06 Score=78.10 Aligned_cols=64 Identities=25% Similarity=0.368 Sum_probs=46.0
Q ss_pred EEEEEeCCCCCcCh-HHHHHHhhC------CCCCEEEEcCCCCCCc---HHHHHHHHcCC-----CCEEEEcCCCCCCc
Q 018902 40 RIVIVGDVHDDWDL-QEDSKALQL------LKPDLVLFTGDFGNEN---VEIVQSVAELE-----FPKAVILGNHDSWK 103 (349)
Q Consensus 40 ril~iSDlH~~~~~-~~~~~~i~~------~~pD~vI~~GDl~~~~---~~~l~~l~~l~-----~Pi~~V~GNHD~~~ 103 (349)
++++|||+|++... +++++.+.. ...+.+|++||++|+. .++++.|..+. ..++++.||||...
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~ 81 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAF 81 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHH
Confidence 69999999999875 555555542 2357899999999964 55666555442 14789999999653
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol |
| >KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.05 E-value=2.4e-05 Score=72.36 Aligned_cols=64 Identities=27% Similarity=0.362 Sum_probs=41.5
Q ss_pred cEEEEEeCCCCCcCh-HHHHHHhh---CCCCCEEEEcCCCCC---C-----------cH---HHHHHHH---cCCCCEEE
Q 018902 39 VRIVIVGDVHDDWDL-QEDSKALQ---LLKPDLVLFTGDFGN---E-----------NV---EIVQSVA---ELEFPKAV 94 (349)
Q Consensus 39 mril~iSDlH~~~~~-~~~~~~i~---~~~pD~vI~~GDl~~---~-----------~~---~~l~~l~---~l~~Pi~~ 94 (349)
|||++-+=.|+..+. -+.+..+. ..++|++|+|||+.. . .. .+.+-.+ +.++|.++
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 789999999998664 22233333 359999999999852 1 01 1222211 23677889
Q ss_pred EcCCCCCC
Q 018902 95 ILGNHDSW 102 (349)
Q Consensus 95 V~GNHD~~ 102 (349)
|-|||+..
T Consensus 81 IGGNHEAs 88 (456)
T KOG2863|consen 81 IGGNHEAS 88 (456)
T ss_pred ecCchHHH
Confidence 99999964
|
|
| >COG1407 Predicted ICC-like phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.00 E-value=1.4e-05 Score=70.93 Aligned_cols=62 Identities=24% Similarity=0.413 Sum_probs=42.9
Q ss_pred cEEEEEeCCCCCcCh--------------HH----HHHHhhCCCCCEEEEcCCCCCCc-----------HHHHHHHHcCC
Q 018902 39 VRIVIVGDVHDDWDL--------------QE----DSKALQLLKPDLVLFTGDFGNEN-----------VEIVQSVAELE 89 (349)
Q Consensus 39 mril~iSDlH~~~~~--------------~~----~~~~i~~~~pD~vI~~GDl~~~~-----------~~~l~~l~~l~ 89 (349)
-+.+++||+|.+... ++ +.+.+...+|+.+|+.||+.++. ..+++.+.. .
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~-~ 98 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDE-R 98 (235)
T ss_pred CcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhcc-C
Confidence 479999999998642 11 22345578999999999998642 123333332 2
Q ss_pred CCEEEEcCCCCCC
Q 018902 90 FPKAVILGNHDSW 102 (349)
Q Consensus 90 ~Pi~~V~GNHD~~ 102 (349)
-+++|.||||..
T Consensus 99 -evi~i~GNHD~~ 110 (235)
T COG1407 99 -EVIIIRGNHDNG 110 (235)
T ss_pred -cEEEEeccCCCc
Confidence 499999999965
|
|
| >smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Probab=97.67 E-value=6.7e-05 Score=69.07 Aligned_cols=66 Identities=20% Similarity=0.306 Sum_probs=47.5
Q ss_pred cEEEEEeCCCCCcCh-HHHHHHhhCCCCCEEEEcCCCCCCc---HHHHHHHHcC----CCCEEEEcCCCCCCcc
Q 018902 39 VRIVIVGDVHDDWDL-QEDSKALQLLKPDLVLFTGDFGNEN---VEIVQSVAEL----EFPKAVILGNHDSWKT 104 (349)
Q Consensus 39 mril~iSDlH~~~~~-~~~~~~i~~~~pD~vI~~GDl~~~~---~~~l~~l~~l----~~Pi~~V~GNHD~~~~ 104 (349)
.+++++||+|++... .++++.+.....+-+|+.||++|+. .+.+..+..+ +..++.+.||||....
T Consensus 28 ~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e~l~~l~~lk~~~p~~v~llrGNHE~~~~ 101 (271)
T smart00156 28 APVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIEVILLLFALKILYPNRVVLLRGNHESRSM 101 (271)
T ss_pred CCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChHHHHHHHHHHHhcCCCCEEEEeccccHHHH
Confidence 579999999999764 4455555555678999999999964 4444443322 4468999999998543
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. |
| >cd07416 MPP_PP2B PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00011 Score=68.78 Aligned_cols=63 Identities=21% Similarity=0.259 Sum_probs=45.6
Q ss_pred EEEEEeCCCCCcCh-HHHHHHhhCCCCCEEEEcCCCCCCc---HHHHHHHHcC----CCCEEEEcCCCCCC
Q 018902 40 RIVIVGDVHDDWDL-QEDSKALQLLKPDLVLFTGDFGNEN---VEIVQSVAEL----EFPKAVILGNHDSW 102 (349)
Q Consensus 40 ril~iSDlH~~~~~-~~~~~~i~~~~pD~vI~~GDl~~~~---~~~l~~l~~l----~~Pi~~V~GNHD~~ 102 (349)
++.++||+|++... .++++.......|-+|++||++|+. .+.+..+..+ +..++.+.||||..
T Consensus 44 ~i~ViGDIHG~~~dL~~l~~~~g~~~~~~ylFLGDyVDRG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~ 114 (305)
T cd07416 44 PVTVCGDIHGQFYDLLKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECR 114 (305)
T ss_pred CEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEECCccCCCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHH
Confidence 59999999999764 4455544444568999999999964 4444444333 34589999999975
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G |
| >cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.0034 Score=57.17 Aligned_cols=65 Identities=17% Similarity=0.134 Sum_probs=41.8
Q ss_pred EEEEEeCCCCCcCh------HHHHHHhhC-----------CCCCEEEEcCCCCCCc---------------------HH-
Q 018902 40 RIVIVGDVHDDWDL------QEDSKALQL-----------LKPDLVLFTGDFGNEN---------------------VE- 80 (349)
Q Consensus 40 ril~iSDlH~~~~~------~~~~~~i~~-----------~~pD~vI~~GDl~~~~---------------------~~- 80 (349)
+++++||+|.+... +.+++.+.. .++..+|++||.++.. .+
T Consensus 1 ~i~~vSgL~ig~~~~~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (257)
T cd07387 1 YIALVSGLGLGGNAESSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEA 80 (257)
T ss_pred CEEEEcccccCCCccchHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhccccccchhhHHH
Confidence 47999999997652 334555552 2345799999988621 01
Q ss_pred ---HHHHHHcC--CCCEEEEcCCCCCCcc
Q 018902 81 ---IVQSVAEL--EFPKAVILGNHDSWKT 104 (349)
Q Consensus 81 ---~l~~l~~l--~~Pi~~V~GNHD~~~~ 104 (349)
+-+.|.++ .+||.+.|||||....
T Consensus 81 ~~~ld~~l~~l~~~i~V~imPG~~Dp~~~ 109 (257)
T cd07387 81 VKELDNFLSQLASSVPVDLMPGEFDPANH 109 (257)
T ss_pred HHHHHHHHHhhhcCCeEEECCCCCCcccc
Confidence 11122332 5899999999997543
|
PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily |
| >cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00016 Score=67.82 Aligned_cols=65 Identities=23% Similarity=0.274 Sum_probs=44.6
Q ss_pred EEEEEeCCCCCcCh-HHHHHHhhCC-CCCEEEEcCCCCCCc---HHHHHHHHcC----CCCEEEEcCCCCCCcc
Q 018902 40 RIVIVGDVHDDWDL-QEDSKALQLL-KPDLVLFTGDFGNEN---VEIVQSVAEL----EFPKAVILGNHDSWKT 104 (349)
Q Consensus 40 ril~iSDlH~~~~~-~~~~~~i~~~-~pD~vI~~GDl~~~~---~~~l~~l~~l----~~Pi~~V~GNHD~~~~ 104 (349)
+++++||+|++... .++++..... ..+.+|++||++|+. .+.+..|..+ +-.++.+.||||....
T Consensus 52 ~~~vvGDiHG~~~dL~~il~~~g~~~~~~~~lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~ 125 (321)
T cd07420 52 QVTICGDLHGKLDDLFLIFYKNGLPSPENPYVFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIM 125 (321)
T ss_pred CeEEEEeCCCCHHHHHHHHHHcCCCCccceEEEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhh
Confidence 78999999999764 3444433222 236899999999974 4555444332 3458899999998654
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all |
| >PHA03008 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.0016 Score=55.44 Aligned_cols=61 Identities=16% Similarity=0.196 Sum_probs=39.9
Q ss_pred eEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCccEEEeCccCCCcccCCcceEEEEEcCCc
Q 018902 188 LVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKELAYGNGLRKMIVVGADS 267 (349)
Q Consensus 188 ~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~~~~~g~~~~~~~~~~g 267 (349)
..||+||.||++.++. ..|++.|.+.+.++ +|++.++||.-+...-. .. .. ..
T Consensus 162 tDILITHgPP~GhLD~--------------~vGC~~Ll~~I~rV------KPKyHVFGh~~~~~~p~----~~--~y-~d 214 (234)
T PHA03008 162 CDILITASPPFAILDD--------------DLACGDLFSKVIKI------KPKFHIFNGLTQFSHPN----IF--IY-KD 214 (234)
T ss_pred CCEEEeCCCCcccccc--------------ccCcHHHHHHHHHh------CCcEEEeCCccccCCCc----EE--Ee-cc
Confidence 5799999999987432 23888877766643 49999999965442111 11 11 46
Q ss_pred eEEEeecc
Q 018902 268 TIYLNGAI 275 (349)
Q Consensus 268 t~yvn~g~ 275 (349)
..++|+-.
T Consensus 215 i~f~nsni 222 (234)
T PHA03008 215 IIFINSNI 222 (234)
T ss_pred eEEEeccc
Confidence 77777754
|
|
| >cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00022 Score=66.37 Aligned_cols=64 Identities=19% Similarity=0.213 Sum_probs=45.8
Q ss_pred EEEEEeCCCCCcCh-HHHHHHhhCCCCCEEEEcCCCCCCc---HHHHHHHHcC----CCCEEEEcCCCCCCc
Q 018902 40 RIVIVGDVHDDWDL-QEDSKALQLLKPDLVLFTGDFGNEN---VEIVQSVAEL----EFPKAVILGNHDSWK 103 (349)
Q Consensus 40 ril~iSDlH~~~~~-~~~~~~i~~~~pD~vI~~GDl~~~~---~~~l~~l~~l----~~Pi~~V~GNHD~~~ 103 (349)
++.++||+|++... .++++.......+-+|+.||++|+. .+.+..+..+ +..++.+.||||...
T Consensus 51 ~i~viGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~~ 122 (293)
T cd07414 51 PLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECAS 122 (293)
T ss_pred ceEEEEecCCCHHHHHHHHHhcCCCCcceEEEEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchhh
Confidence 59999999998764 4455555445567899999999963 4444444332 345899999999864
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg |
| >cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00015 Score=67.12 Aligned_cols=64 Identities=23% Similarity=0.282 Sum_probs=44.9
Q ss_pred EEEEEeCCCCCcCh-HHHHHHhhCCCCCEEEEcCCCCCCc---HHHHHHHHcC----CCCEEEEcCCCCCCc
Q 018902 40 RIVIVGDVHDDWDL-QEDSKALQLLKPDLVLFTGDFGNEN---VEIVQSVAEL----EFPKAVILGNHDSWK 103 (349)
Q Consensus 40 ril~iSDlH~~~~~-~~~~~~i~~~~pD~vI~~GDl~~~~---~~~l~~l~~l----~~Pi~~V~GNHD~~~ 103 (349)
++.++||+|++... .++++.......+-+|++||++|+. .+.+..+..+ +..++.+.||||...
T Consensus 43 ~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~ 114 (285)
T cd07415 43 PVTVCGDIHGQFYDLLELFRVGGDPPDTNYLFLGDYVDRGYYSVETFLLLLALKVRYPDRITLLRGNHESRQ 114 (285)
T ss_pred CEEEEEeCCCCHHHHHHHHHHcCCCCCCeEEEEeEECCCCcCHHHHHHHHHHHhhcCCCcEEEEecccchHh
Confidence 59999999998764 3455544444567899999999974 3444433322 446999999999753
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2 |
| >PTZ00244 serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00014 Score=67.62 Aligned_cols=64 Identities=19% Similarity=0.188 Sum_probs=44.3
Q ss_pred EEEEeCCCCCcCh-HHHHHHhhCCCCCEEEEcCCCCCCc---HHHHHHHHc----CCCCEEEEcCCCCCCcc
Q 018902 41 IVIVGDVHDDWDL-QEDSKALQLLKPDLVLFTGDFGNEN---VEIVQSVAE----LEFPKAVILGNHDSWKT 104 (349)
Q Consensus 41 il~iSDlH~~~~~-~~~~~~i~~~~pD~vI~~GDl~~~~---~~~l~~l~~----l~~Pi~~V~GNHD~~~~ 104 (349)
+.++||+|++... .++++.+.....+-+|+.||++|+. .+.+..+.. .+..++.+.||||....
T Consensus 54 ~~ViGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~ 125 (294)
T PTZ00244 54 VRVCGDTHGQYYDLLRIFEKCGFPPYSNYLFLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASI 125 (294)
T ss_pred ceeeccCCCCHHHHHHHHHHcCCCCcccEEEeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhH
Confidence 7899999999764 4455555444456788999999974 344433321 14569999999997543
|
|
| >PTZ00480 serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00038 Score=65.29 Aligned_cols=64 Identities=20% Similarity=0.195 Sum_probs=45.5
Q ss_pred EEEEEeCCCCCcCh-HHHHHHhhCCCCCEEEEcCCCCCCc---HHHHHHHHcC----CCCEEEEcCCCCCCc
Q 018902 40 RIVIVGDVHDDWDL-QEDSKALQLLKPDLVLFTGDFGNEN---VEIVQSVAEL----EFPKAVILGNHDSWK 103 (349)
Q Consensus 40 ril~iSDlH~~~~~-~~~~~~i~~~~pD~vI~~GDl~~~~---~~~l~~l~~l----~~Pi~~V~GNHD~~~ 103 (349)
++.++||+|++... .++++.......+-+|+.||++|+. .+.+..+..+ +..++.+.||||...
T Consensus 60 ~i~vvGDIHG~~~dL~~l~~~~g~~~~~~ylfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~ 131 (320)
T PTZ00480 60 PLKICGDVHGQYFDLLRLFEYGGYPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECAS 131 (320)
T ss_pred CeEEEeecccCHHHHHHHHHhcCCCCcceEEEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhh
Confidence 59999999998654 4455554444567899999999964 4555444433 345899999999854
|
|
| >PTZ00239 serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00036 Score=65.10 Aligned_cols=64 Identities=25% Similarity=0.314 Sum_probs=45.4
Q ss_pred EEEEEeCCCCCcCh-HHHHHHhhCCCCCEEEEcCCCCCCc---HHHHHHHHcC----CCCEEEEcCCCCCCc
Q 018902 40 RIVIVGDVHDDWDL-QEDSKALQLLKPDLVLFTGDFGNEN---VEIVQSVAEL----EFPKAVILGNHDSWK 103 (349)
Q Consensus 40 ril~iSDlH~~~~~-~~~~~~i~~~~pD~vI~~GDl~~~~---~~~l~~l~~l----~~Pi~~V~GNHD~~~ 103 (349)
.+.++||+|++... .++++.+.....+-+|+.||++|+. .+.+..+..+ +.-++.+.||||...
T Consensus 44 ~i~vvGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~ 115 (303)
T PTZ00239 44 PVNVCGDIHGQFYDLQALFKEGGDIPNANYIFIGDFVDRGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQ 115 (303)
T ss_pred CEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEeeeEcCCCCCHHHHHHHHHHhhhcCCCcEEEEecccchHH
Confidence 48999999998764 4455544444567899999999964 4455544433 335899999999754
|
|
| >smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.019 Score=51.75 Aligned_cols=26 Identities=15% Similarity=0.065 Sum_probs=20.6
Q ss_pred HHHHHHHHcCCCCEEEEcCCCCCCcc
Q 018902 79 VEIVQSVAELEFPKAVILGNHDSWKT 104 (349)
Q Consensus 79 ~~~l~~l~~l~~Pi~~V~GNHD~~~~ 104 (349)
.+.++.|..++.-++.+.+||++...
T Consensus 63 ~~~~~~l~~~G~d~~~laNNH~fD~G 88 (239)
T smart00854 63 PENAAALKAAGFDVVSLANNHSLDYG 88 (239)
T ss_pred HHHHHHHHHhCCCEEEeccCcccccc
Confidence 57888888888887777779998643
|
This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein. |
| >cd07418 MPP_PP7 PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.00027 Score=67.49 Aligned_cols=66 Identities=21% Similarity=0.263 Sum_probs=43.9
Q ss_pred EEEEEeCCCCCcCh-HHHHHHhhCCCC-CEEEEcCCCCCCc---HHHHHHHHcC----CCCEEEEcCCCCCCccc
Q 018902 40 RIVIVGDVHDDWDL-QEDSKALQLLKP-DLVLFTGDFGNEN---VEIVQSVAEL----EFPKAVILGNHDSWKTQ 105 (349)
Q Consensus 40 ril~iSDlH~~~~~-~~~~~~i~~~~p-D~vI~~GDl~~~~---~~~l~~l~~l----~~Pi~~V~GNHD~~~~~ 105 (349)
++.++||+|++... ..+++.+.-... +.+|+.||++|+. .+.+..+..+ +..++.+.||||.....
T Consensus 67 ~i~VvGDIHG~~~dL~~ll~~~g~~~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~ 141 (377)
T cd07418 67 EVVVVGDVHGQLHDVLFLLEDAGFPDQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCT 141 (377)
T ss_pred CEEEEEecCCCHHHHHHHHHHhCCCCCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccch
Confidence 69999999999764 344443322223 4599999999964 4444443332 34589999999986433
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, |
| >cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.025 Score=50.98 Aligned_cols=26 Identities=15% Similarity=0.148 Sum_probs=20.4
Q ss_pred HHHHHHHHcCCCCEEEEcCCCCCCcc
Q 018902 79 VEIVQSVAELEFPKAVILGNHDSWKT 104 (349)
Q Consensus 79 ~~~l~~l~~l~~Pi~~V~GNHD~~~~ 104 (349)
.+.++.|..++.-++.+.+||++...
T Consensus 67 ~~~~~~L~~~G~d~~tlaNNH~fD~G 92 (239)
T cd07381 67 PEVADALKAAGFDVVSLANNHTLDYG 92 (239)
T ss_pred HHHHHHHHHhCCCEEEcccccccccc
Confidence 57888888888887777779997643
|
CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal |
| >cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.00047 Score=64.78 Aligned_cols=65 Identities=23% Similarity=0.318 Sum_probs=44.0
Q ss_pred cEEEEEeCCCCCcCh-HHHHHHhhCC-CCCEEEEcCCCCCCc---HHHHHHHHcC----CCCEEEEcCCCCCCc
Q 018902 39 VRIVIVGDVHDDWDL-QEDSKALQLL-KPDLVLFTGDFGNEN---VEIVQSVAEL----EFPKAVILGNHDSWK 103 (349)
Q Consensus 39 mril~iSDlH~~~~~-~~~~~~i~~~-~pD~vI~~GDl~~~~---~~~l~~l~~l----~~Pi~~V~GNHD~~~ 103 (349)
.++.++||+|++... .++++.+.-. +-|-+|++||++|+. .+.+..+..+ +..++.+.||||...
T Consensus 60 ~~~~VvGDIHG~~~dL~~ll~~~g~~~~~~~ylFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~ 133 (316)
T cd07417 60 EKITVCGDTHGQFYDLLNIFELNGLPSETNPYLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDN 133 (316)
T ss_pred ceeEEeecccCCHHHHHHHHHhcCCCCccCeEEEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHH
Confidence 479999999998764 3344433221 235799999999974 4444444332 345889999999743
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel |
| >PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: |
Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0076 Score=59.72 Aligned_cols=211 Identities=14% Similarity=0.101 Sum_probs=82.3
Q ss_pred CCCCCCccEEEEEeCCCCCcChHHHHHHhhC-CCCCEEEEcCCCCCCc-------------------------H------
Q 018902 32 PAMSASVVRIVIVGDVHDDWDLQEDSKALQL-LKPDLVLFTGDFGNEN-------------------------V------ 79 (349)
Q Consensus 32 ~~~~~~~mril~iSDlH~~~~~~~~~~~i~~-~~pD~vI~~GDl~~~~-------------------------~------ 79 (349)
|......+||++.|+.+.........+.+.+ .+||++|++||.+-+. .
T Consensus 99 p~~~~~~~r~a~~SC~~~~~~~~~~~~~~a~~~~~D~~l~lGD~IY~d~~~~~~~~~~~~~~r~~~p~~~~~~l~~yR~~ 178 (453)
T PF09423_consen 99 PDGDPDPFRFAFGSCQNYEDGYFPAYRRIAERDDPDFVLHLGDQIYEDGGGGYGNLSRRPIGRAPEPAHEAETLDDYRRR 178 (453)
T ss_dssp TT-----EEEEEE----CCC---HHHHHHTT-S--SEEEE-S-SS----TTSS--TT---S-----SSSS--SHHHHHHH
T ss_pred CCCCCCceEEEEECCCCcccChHHHHHhhhccCCCcEEEEeCCeeeccCCcccccccccccccccccccccccHHHHHHH
Confidence 4444456999999999985443456666666 6999999999975211 0
Q ss_pred -------HHHHHHHcCCCCEEEEcCCCCCCcccccccc-------------chhHHHHHHHHhCC--------cceeeEE
Q 018902 80 -------EIVQSVAELEFPKAVILGNHDSWKTQEFSGK-------------KKDGVQLQLECLGE--------EHVAYRR 131 (349)
Q Consensus 80 -------~~l~~l~~l~~Pi~~V~GNHD~~~~~~~~~~-------------~~~~~~~~l~~~~~--------~~~~~~~ 131 (349)
.-++.+.+ .+|+++|.=.||+......... ....++.+++.... ....|..
T Consensus 179 y~~~~~~p~l~~~~~-~~P~~~iwDDHdi~nn~~~~~~~~~~~~~~~~~~~~~~a~~ay~e~~p~r~~~~~~~~~~~y~~ 257 (453)
T PF09423_consen 179 YRQYRSDPDLRRLHA-NVPWIMIWDDHDIGNNWWGDGAENHQDTSGDFQDRRRAAYQAYFEYQPVRNPDPPGDQGRIYRS 257 (453)
T ss_dssp HHHHHT-HHHHHHHH-HSEEEE---STTTSTT-BTTB-STT---HHHHHHHHHHHHHHHHHHS---GGG-BTTB----EE
T ss_pred HHHHcCCHHHHHHhh-cccEEEEccCceecccccCCccccccccccchHHHHHHHHHHHHhhcCccCCCccCCCCceEEE
Confidence 01222222 6899999999998644321111 01111222211111 1112333
Q ss_pred eecCC-ceEEEeCCeeeecCCchh----hh---hhhhhhccCCcchHHHHHHHHHHHhCCCCCCeEEEEeccCCCCCCCC
Q 018902 132 LDFPT-LKLSIVGGRPFSCGGQQI----FR---KRLLSVRYGVQDMDESAKRIYKVALGTPDDHLVILLAHNGPSGLGSE 203 (349)
Q Consensus 132 l~~~~-~~i~~~g~~~~~~~g~~~----~~---~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~Ilv~H~PP~~~g~~ 203 (349)
+.... +.+.++..+.+....... .. ....+...|. +|..||.+.+.+.. .+.+|+++=.|.......
T Consensus 258 ~~~G~~~~~~~LD~R~~R~~~~~~~~~~~~~~~~~~~~~mLG~----~Q~~wL~~~L~~s~-a~~kvi~s~v~~~~~~~~ 332 (453)
T PF09423_consen 258 FRYGDLVEFFMLDTRSYRSPPPCDGPGDTCPAADDPSRTMLGE----EQWDWLEDWLASSQ-ATWKVIGSSVPFSPLNFP 332 (453)
T ss_dssp EEETTTEEEEE--SSSS----CCCSSEE--HHHH-TT--SS-H----HHHHHHHHHHHH---SSEEEEE-SS--S---SS
T ss_pred EecCCceeEEEEechhccccccccccccccccccCCccCcCCH----HHHHHHHHHHhcCC-CcEEEEEeCCceeccccc
Confidence 34444 566666664332210000 00 0001122332 34566777666544 567888876643222111
Q ss_pred CCCCCCCCCCCCCCCC-CCHHHHHHHHHHHHhcCCCccEEEeCccCCCc
Q 018902 204 PNDICGKDWGFGGGDH-GDPDLAQAISLLKETTKLCIPLVVFGHMHKEL 251 (349)
Q Consensus 204 ~~~~~~~d~~~~~~~~-G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~ 251 (349)
... .........| |-+.-++.|.+++++.+.+=-++|+|.+|...
T Consensus 333 ~~~---~~~~~~~d~W~g~~~er~~Ll~~l~~~~~~~vV~LSGDvH~~~ 378 (453)
T PF09423_consen 333 DAA---EGLPFNMDSWDGYPAERQRLLDFLRESGIRNVVFLSGDVHASA 378 (453)
T ss_dssp -SS----S--EETTSGGGSHHHHHHHHHHHHHTT---EEEEE-SSSSEE
T ss_pred ccc---cccccCCCchhhCHHHHHHHHHHHHhhCCCCEEEEecCcchhe
Confidence 000 0000011234 56666677777776443222488999999973
|
|
| >cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.00088 Score=62.91 Aligned_cols=64 Identities=23% Similarity=0.261 Sum_probs=42.2
Q ss_pred EEEEEeCCCCCcCh-HHHHHHhhCCC--------CCEEEEcCCCCCCc---HHHHHHHHcC----CCCEEEEcCCCCCCc
Q 018902 40 RIVIVGDVHDDWDL-QEDSKALQLLK--------PDLVLFTGDFGNEN---VEIVQSVAEL----EFPKAVILGNHDSWK 103 (349)
Q Consensus 40 ril~iSDlH~~~~~-~~~~~~i~~~~--------pD~vI~~GDl~~~~---~~~l~~l~~l----~~Pi~~V~GNHD~~~ 103 (349)
.+.++||+|++... .++++.+.... ..-+|+.||++|+. .+.+..+..+ +..++.+.||||...
T Consensus 49 ~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~~~~~~~vfLGDyVDRGp~s~evl~ll~~lk~~~p~~v~lLRGNHE~~~ 128 (311)
T cd07419 49 PIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGDIEYIDYLFLGDYVDRGSNSLETICLLLALKVKYPNQIHLIRGNHEDRD 128 (311)
T ss_pred CEEEEEeccCCHHHHHHHHHHcCCCcccccCCCcCceEEEECCccCCCCChHHHHHHHHHhhhcCCCcEEEeccccchHH
Confidence 48899999998764 33554432111 12488999999964 4455444333 445899999999753
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most |
| >COG1692 Calcineurin-like phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.044 Score=48.84 Aligned_cols=64 Identities=25% Similarity=0.318 Sum_probs=46.3
Q ss_pred cEEEEEeCCCCCcChHHH---HHHhh-CCCCCEEEEcCCCCCC----cHHHHHHHHcCCCCEEEEcCCCCCCc
Q 018902 39 VRIVIVGDVHDDWDLQED---SKALQ-LLKPDLVLFTGDFGNE----NVEIVQSVAELEFPKAVILGNHDSWK 103 (349)
Q Consensus 39 mril~iSDlH~~~~~~~~---~~~i~-~~~pD~vI~~GDl~~~----~~~~l~~l~~l~~Pi~~V~GNHD~~~ 103 (349)
||+++++|+=+..-...+ +..++ +.++|+||+-|--+.. ..+..+.|.+.++- ++..|||=+..
T Consensus 1 mriLfiGDvvGk~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENaa~G~Git~k~y~~l~~~G~d-viT~GNH~wd~ 72 (266)
T COG1692 1 MRILFIGDVVGKPGRKAVKEHLPQLKSKYKIDFVIVNGENAAGGFGITEKIYKELLEAGAD-VITLGNHTWDQ 72 (266)
T ss_pred CeEEEEecccCcchHHHHHHHhHHHHHhhcCcEEEEcCccccCCcCCCHHHHHHHHHhCCC-EEecccccccc
Confidence 799999999987654333 33333 4589999999987653 35677777666665 67899998643
|
|
| >PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.11 Score=47.05 Aligned_cols=154 Identities=14% Similarity=0.090 Sum_probs=77.3
Q ss_pred cHHHHHHHHcCCCCEEEEcCCCCCCccccccccchhHHHHHHHHhCCccee----------eEEeecCCceEEEeCCeee
Q 018902 78 NVEIVQSVAELEFPKAVILGNHDSWKTQEFSGKKKDGVQLQLECLGEEHVA----------YRRLDFPTLKLSIVGGRPF 147 (349)
Q Consensus 78 ~~~~l~~l~~l~~Pi~~V~GNHD~~~~~~~~~~~~~~~~~~l~~~~~~~~~----------~~~l~~~~~~i~~~g~~~~ 147 (349)
..+.++.|..++.-++.+.-||-+... ......-.+.++..+..+.+ ...++.++.++.+++....
T Consensus 64 ~~~~~~~L~~~G~d~vslANNH~~D~G----~~gl~~Tl~~L~~~gi~~~Gag~~~~~a~~p~i~~~~g~kia~l~~t~~ 139 (250)
T PF09587_consen 64 PPEILDALKDAGFDVVSLANNHIFDYG----EEGLLDTLEALDKAGIPYVGAGRNLEEARRPAIIEVNGVKIAFLGYTDG 139 (250)
T ss_pred CHHHHHHHHHcCCCEEEecCCCCcccc----HHHHHHHHHHHHHCCCcEeECcCChHHhcCeEEEEECCEEEEEEEEEcC
Confidence 357889999888888899999976532 12222233444444444333 2334455666665554321
Q ss_pred ecCCchhhhhhh------hhhccCCcchHHHHHHHHHHHhCC-CCCCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018902 148 SCGGQQIFRKRL------LSVRYGVQDMDESAKRIYKVALGT-PDDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHG 220 (349)
Q Consensus 148 ~~~g~~~~~~~~------~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G 220 (349)
. .+........ .....+........+.+.+.+++. ...+.+|++.|... ++... =
T Consensus 140 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~r~~~D~vIv~~HwG~-------------e~~~~----p 201 (250)
T PF09587_consen 140 E-NGYSSANGNRPYGFSYRPDKAGLNPNRPGIERIKEDIREARKKADVVIVSLHWGI-------------EYENY----P 201 (250)
T ss_pred C-CCCccccccccccccccccccccccccchHHHHHHHHHHHhcCCCEEEEEeccCC-------------CCCCC----C
Confidence 1 0000000000 000000011111112233322222 23578999999842 11111 1
Q ss_pred CHHHHHHHHHHHHhcCCCccEEEeCccCCCcccCCcceEE
Q 018902 221 DPDLAQAISLLKETTKLCIPLVVFGHMHKELAYGNGLRKM 260 (349)
Q Consensus 221 ~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~~~~~g~~~~ 260 (349)
.+..++....+++ .++|+|+.+|.|.. +++...
T Consensus 202 ~~~q~~~a~~lid---aGaDiIiG~HpHv~----q~~E~y 234 (250)
T PF09587_consen 202 TPEQRELARALID---AGADIIIGHHPHVI----QPVEIY 234 (250)
T ss_pred CHHHHHHHHHHHH---cCCCEEEeCCCCcc----cceEEE
Confidence 3555566666665 47999999999999 455544
|
Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein []. |
| >PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.011 Score=52.18 Aligned_cols=64 Identities=19% Similarity=0.267 Sum_probs=38.8
Q ss_pred EEEEeCCCCCcCh------HHHHHHhh-CCCCCEEEEcCCCCCCc----------------H----HHHHHHHcC--CCC
Q 018902 41 IVIVGDVHDDWDL------QEDSKALQ-LLKPDLVLFTGDFGNEN----------------V----EIVQSVAEL--EFP 91 (349)
Q Consensus 41 il~iSDlH~~~~~------~~~~~~i~-~~~pD~vI~~GDl~~~~----------------~----~~l~~l~~l--~~P 91 (349)
|+++||+|.+... .+++..+. ..+|+.+|++|++++.. . ++.+.+.++ .++
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 6899999998442 34455555 67899999999998731 1 122222333 478
Q ss_pred EEEEcCCCCCCcc
Q 018902 92 KAVILGNHDSWKT 104 (349)
Q Consensus 92 i~~V~GNHD~~~~ 104 (349)
+++|||+||....
T Consensus 81 vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 81 VVLVPGPNDPTSS 93 (209)
T ss_dssp EEEE--TTCTT-S
T ss_pred EEEeCCCcccccc
Confidence 9999999998765
|
In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G. |
| >KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.02 E-value=0.78 Score=46.03 Aligned_cols=66 Identities=17% Similarity=0.212 Sum_probs=40.7
Q ss_pred ccEEEEEeCCCCCcCh------------------HHHHHHhhCCCCCE-EEEcCCCCCC---------cHHHHHHHHcCC
Q 018902 38 VVRIVIVGDVHDDWDL------------------QEDSKALQLLKPDL-VLFTGDFGNE---------NVEIVQSVAELE 89 (349)
Q Consensus 38 ~mril~iSDlH~~~~~------------------~~~~~~i~~~~pD~-vI~~GDl~~~---------~~~~l~~l~~l~ 89 (349)
.++|.|.+|+|+.... ..+.+.+....+|+ ++-+||+-+. .-.....|.++
T Consensus 42 ~~nf~hTtdthG~~~~h~~~~~~~~~~G~f~~f~~~~k~~a~~~~~dvl~~dtGD~hdGtg~sd~~~~~g~~t~~l~~~- 120 (602)
T KOG4419|consen 42 QPNFIHTTDTHGWLGSHLRDARYDADFGDFAAFALRMKELADRKGVDVLLVDTGDLHDGTGLSDATDPPGIYTNFLFKM- 120 (602)
T ss_pred cccceeeccccccccccccchhhhhhhhhHHHHHHHHHHHHhccCCCEEEEecccccCCceeeeccCCchHHHHHHHhc-
Confidence 4789999999996430 11223344567775 6678998763 12344444432
Q ss_pred CC-EEEEcCCCCCCcc
Q 018902 90 FP-KAVILGNHDSWKT 104 (349)
Q Consensus 90 ~P-i~~V~GNHD~~~~ 104 (349)
.| =....|||+.+..
T Consensus 121 ~~yD~l~lGNHEl~~~ 136 (602)
T KOG4419|consen 121 MPYDILTLGNHELYQA 136 (602)
T ss_pred Cccchhhhcchhhhhh
Confidence 23 3578999998765
|
|
| >KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.021 Score=53.95 Aligned_cols=66 Identities=21% Similarity=0.348 Sum_probs=43.4
Q ss_pred EEEEEeCCCCCcCh-HHHHHHhhCCCCC-EEEEcCCCCCCcHHHHH------HHH-cCCCCEEEEcCCCCCCccc
Q 018902 40 RIVIVGDVHDDWDL-QEDSKALQLLKPD-LVLFTGDFGNENVEIVQ------SVA-ELEFPKAVILGNHDSWKTQ 105 (349)
Q Consensus 40 ril~iSDlH~~~~~-~~~~~~i~~~~pD-~vI~~GDl~~~~~~~l~------~l~-~l~~Pi~~V~GNHD~~~~~ 105 (349)
-+.+++|+|++... .+++.......|| -.+++||++|+...-++ .+. +.+..++.+.|||+.....
T Consensus 60 PV~i~GDiHGq~~DLlrlf~~~g~~pp~~~ylFLGDYVDRG~~slE~i~LL~a~Ki~yp~~~~lLRGNHE~~~in 134 (331)
T KOG0374|consen 60 PVKIVGDIHGQFGDLLRLFDLLGSFPPDQNYVFLGDYVDRGKQSLETICLLFALKIKYPENVFLLRGNHECASIN 134 (331)
T ss_pred CEEEEccCcCCHHHHHHHHHhcCCCCCcccEEEecccccCCccceEEeehhhhhhhhCCceEEEecccccccccc
Confidence 48999999999763 3333333213355 59999999997533211 111 1356699999999987654
|
|
| >KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=94.77 E-value=0.038 Score=49.12 Aligned_cols=63 Identities=22% Similarity=0.320 Sum_probs=40.2
Q ss_pred EEEEeCCCCCcChHHHHHHhh--CCCC-CEEEEcCCCCCCcHHHHH------HHH-cCCCCEEEEcCCCCCCccc
Q 018902 41 IVIVGDVHDDWDLQEDSKALQ--LLKP-DLVLFTGDFGNENVEIVQ------SVA-ELEFPKAVILGNHDSWKTQ 105 (349)
Q Consensus 41 il~iSDlH~~~~~~~~~~~i~--~~~p-D~vI~~GDl~~~~~~~l~------~l~-~l~~Pi~~V~GNHD~~~~~ 105 (349)
+.+.+|+|++... +++..+ ..-| .-.++.||++|+....++ .|+ +.+..+-.|.|||+.....
T Consensus 45 vtvcGDIHGQf~D--llelf~igG~~~~t~YLFLGDyVDRG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqit 117 (303)
T KOG0372|consen 45 VTVCGDIHGQFYD--LLELFRIGGDVPETNYLFLGDYVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQIT 117 (303)
T ss_pred cEEeecccchHHH--HHHHHHhCCCCCCCceEeecchhccccchHHHHHHHHHHhhcCcceeEEeeccchhhhhh
Confidence 7789999998763 333222 2222 358999999997532222 222 2256689999999976543
|
|
| >PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C | Back alignment and domain information |
|---|
Probab=93.92 E-value=3.2 Score=37.50 Aligned_cols=221 Identities=18% Similarity=0.201 Sum_probs=90.6
Q ss_pred EEEeCCCCCcCh---HHHHHHhh-CCCCCEEEEcCCCCCC----cHHHHHHHHcCCCCEEEEcCCCCCCccccccccchh
Q 018902 42 VIVGDVHDDWDL---QEDSKALQ-LLKPDLVLFTGDFGNE----NVEIVQSVAELEFPKAVILGNHDSWKTQEFSGKKKD 113 (349)
Q Consensus 42 l~iSDlH~~~~~---~~~~~~i~-~~~pD~vI~~GDl~~~----~~~~l~~l~~l~~Pi~~V~GNHD~~~~~~~~~~~~~ 113 (349)
++++|+=+..-. .+.+..++ +.++|+||.-|.-... ..+..+.|.+.++- ++..|||=+....
T Consensus 1 LfiGDIvG~~Gr~~v~~~Lp~L~~~~~~DfVIaNgENaa~G~Git~~~~~~L~~~GvD-viT~GNH~wdkke-------- 71 (253)
T PF13277_consen 1 LFIGDIVGKPGRRAVKEHLPELKEEYGIDFVIANGENAAGGFGITPKIAEELFKAGVD-VITMGNHIWDKKE-------- 71 (253)
T ss_dssp EEE-EBBCHHHHHHHHHHHHHHGG--G-SEEEEE-TTTTTTSS--HHHHHHHHHHT-S-EEE--TTTTSSTT--------
T ss_pred CeEEecCCHHHHHHHHHHHHHHHhhcCCCEEEECCcccCCCCCCCHHHHHHHHhcCCC-EEecCcccccCcH--------
Confidence 567887765433 33344444 5699999999997653 35667777666655 6789999865322
Q ss_pred HHHHHHHH-------h----CCcceeeEEeecCCceEEEeCCeeeecCCchhhhhhhhhhccCCcchHHHHHHHHHHHhC
Q 018902 114 GVQLQLEC-------L----GEEHVAYRRLDFPTLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMDESAKRIYKVALG 182 (349)
Q Consensus 114 ~~~~~l~~-------~----~~~~~~~~~l~~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 182 (349)
+...+.. . +....++..++..+.++.+++. -|... + ...+.....++++.+.+..
T Consensus 72 -i~~~i~~~~~ilRPaN~p~~~pG~G~~i~~~~g~kv~ViNl-----~Gr~f-----m---~~~~~PF~~~d~~l~~l~~ 137 (253)
T PF13277_consen 72 -IFDFIDKEPRILRPANYPPGTPGRGYRIFEKNGKKVAVINL-----MGRVF-----M---PPIDCPFRAADRLLEELKE 137 (253)
T ss_dssp -HHHHHHH-SSEE--TTS-TT-SSBSEEEEEETTEEEEEEEE-----E--TT-----S------S-HHHHHHHHHHH---
T ss_pred -HHHHHhcCCCcEECCCCCCCCCcCcEEEEEECCEEEEEEEC-----ccccc-----C---CCCCChHHHHHHHHHhccc
Confidence 2222222 1 1122344445545555554432 12110 0 1111233334555555422
Q ss_pred CCCCCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCccEEEeCccCCCcccCCcceEEEE
Q 018902 183 TPDDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKELAYGNGLRKMIV 262 (349)
Q Consensus 183 ~~~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~~~~~g~~~~~~ 262 (349)
+.+..||=.|.=- ---..++-.++. + ++.+|+-=|||-+.. -.++
T Consensus 138 --~~~~iiVDFHAEa------------------------TSEK~A~g~~lD--G-rvsaV~GTHTHVqTa----DerI-- 182 (253)
T PF13277_consen 138 --ETDIIIVDFHAEA------------------------TSEKQAMGWYLD--G-RVSAVVGTHTHVQTA----DERI-- 182 (253)
T ss_dssp ----SEEEEEEE-S-------------------------HHHHHHHHHHHB--T-TBSEEEEESSSS-BS------EE--
T ss_pred --cCCEEEEEeecCc------------------------HHHHHHHHHHhC--C-cEEEEEeCCCCccCc----hhhc--
Confidence 2345666677510 001145555665 3 799999999999832 2233
Q ss_pred EcCCceEEEee-ccc-ceeeccCCccCCCCCcccc------cccccCCCCCCceeeEEEEEEeC--CeEeEEE
Q 018902 263 VGADSTIYLNG-AIV-PRVKRLIDEQGADSSSVSN------KTSFLRPDSKGTVRAFTVVEILD--GRIDKIA 325 (349)
Q Consensus 263 ~~~~gt~yvn~-g~~-pr~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~f~~v~i~~--~~v~~~~ 325 (349)
=++||.|+.- |+. |+ ++ --|++...+=+ .++.|.++.+...-.-+++++++ |+.+.++
T Consensus 183 -Lp~GTaYiTDvGMtG~~---ds-ViG~~~e~~i~rf~t~~p~~~~~~a~g~~~l~gv~ieid~~tgka~~Ie 250 (253)
T PF13277_consen 183 -LPGGTAYITDVGMTGPY---DS-VIGMDPEEVIERFLTGLPRKRFEVAEGPAQLNGVVIEIDEKTGKATSIE 250 (253)
T ss_dssp --TTS-EEES---EBEES---SS-BTTB-HHHHHHHHHHSS------B--S-EEEEEEEEEE-----------
T ss_pred -cCCCCEEEecCccccCc---cc-ccccCHHHHHHHHHhcCCCcccccCCCCCEEEEEEEEEecccccccccc
Confidence 2478999764 321 11 00 00111111001 12245555444445778888876 5555444
|
|
| >KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=93.29 E-value=0.13 Score=46.19 Aligned_cols=80 Identities=28% Similarity=0.370 Sum_probs=49.6
Q ss_pred EEEEEeCCCCCcCh-HHHHHHhhCCCCCE-EEEcCCCCCCc---HHHHHHHHcC----CCCEEEEcCCCCCCcccccccc
Q 018902 40 RIVIVGDVHDDWDL-QEDSKALQLLKPDL-VLFTGDFGNEN---VEIVQSVAEL----EFPKAVILGNHDSWKTQEFSGK 110 (349)
Q Consensus 40 ril~iSDlH~~~~~-~~~~~~i~~~~pD~-vI~~GDl~~~~---~~~l~~l~~l----~~Pi~~V~GNHD~~~~~~~~~~ 110 (349)
-..+.+|+|++... -+++ .+-...||. .++.||++++. .+.+..|..+ +-.|-.++|||+.....+.-
T Consensus 61 pvtvcGDvHGqf~dl~ELf-kiGG~~pdtnylfmGDyvdrGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvy-- 137 (319)
T KOG0371|consen 61 PVTVCGDVHGQFHDLIELF-KIGGLAPDTNYLFMGDYVDRGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVY-- 137 (319)
T ss_pred ceEEecCcchhHHHHHHHH-HccCCCCCcceeeeeeecccccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHH--
Confidence 38899999999763 2222 344566764 88999999863 3444444333 35588999999975433221
Q ss_pred chhHHHHHHHHhCC
Q 018902 111 KKDGVQLQLECLGE 124 (349)
Q Consensus 111 ~~~~~~~~l~~~~~ 124 (349)
..+.+.++..|+
T Consensus 138 --gfydeclRkyg~ 149 (319)
T KOG0371|consen 138 --GFYDECLRKYGN 149 (319)
T ss_pred --hhHHHHHhhccc
Confidence 124455555554
|
|
| >KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=92.71 E-value=0.22 Score=43.68 Aligned_cols=63 Identities=25% Similarity=0.362 Sum_probs=40.4
Q ss_pred EEEEeCCCCCcCh-HHHHHHhhCCCCC-EEEEcCCCCCCc---HHHHH----HHHcCCCCEEEEcCCCCCCcc
Q 018902 41 IVIVGDVHDDWDL-QEDSKALQLLKPD-LVLFTGDFGNEN---VEIVQ----SVAELEFPKAVILGNHDSWKT 104 (349)
Q Consensus 41 il~iSDlH~~~~~-~~~~~~i~~~~pD-~vI~~GDl~~~~---~~~l~----~l~~l~~Pi~~V~GNHD~~~~ 104 (349)
+-+.+|+|++... .++.+.- ..-|| -.|+.||++|+. .+... ...+.+..|-.+.|||+....
T Consensus 48 VTvCGDIHGQFyDL~eLFrtg-G~vP~tnYiFmGDfVDRGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqi 119 (306)
T KOG0373|consen 48 VTVCGDIHGQFYDLLELFRTG-GQVPDTNYIFMGDFVDRGYYSLETFTLLLLLKARYPAKITLLRGNHESRQI 119 (306)
T ss_pred eeEeeccchhHHHHHHHHHhc-CCCCCcceEEeccccccccccHHHHHHHHHHhhcCCceeEEeeccchhhhh
Confidence 6689999998763 2233221 23345 489999999974 23222 223446778999999997543
|
|
| >KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.49 E-value=0.14 Score=47.95 Aligned_cols=76 Identities=22% Similarity=0.287 Sum_probs=46.8
Q ss_pred CCCCCCCCCccEEEEEeCCCCCcChHHHHHHhh---CCCCCEEEEcCCCCCCc---HHHHHHHHc--C--CCCEEEEcCC
Q 018902 29 RSAPAMSASVVRIVIVGDVHDDWDLQEDSKALQ---LLKPDLVLFTGDFGNEN---VEIVQSVAE--L--EFPKAVILGN 98 (349)
Q Consensus 29 ~~~~~~~~~~mril~iSDlH~~~~~~~~~~~i~---~~~pD~vI~~GDl~~~~---~~~l~~l~~--l--~~Pi~~V~GN 98 (349)
|.++.|..-.--|-+.+|||++++. +.+..+ ...-.-.++.||.+|+. .+.+-.|-. + +...+.+.||
T Consensus 78 r~Eknmi~v~APiTVCGDIHGQf~D--LmKLFEVGG~PA~t~YLFLGDYVDRGyFSiECvlYLwsLKi~yp~tl~lLRGN 155 (517)
T KOG0375|consen 78 RQEKNMIEVEAPITVCGDIHGQFFD--LMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWSLKINYPKTLFLLRGN 155 (517)
T ss_pred hcCCceEeccCCeeEecccchHHHH--HHHHHHccCCcccceeEeeccccccceeeeehHHHHHHHhcCCCCeEEEecCC
Confidence 4455555544458899999998763 333222 11223589999999973 232222222 2 4457899999
Q ss_pred CCCCcccc
Q 018902 99 HDSWKTQE 106 (349)
Q Consensus 99 HD~~~~~~ 106 (349)
|+......
T Consensus 156 HECrHLT~ 163 (517)
T KOG0375|consen 156 HECRHLTE 163 (517)
T ss_pred cchhhhHh
Confidence 99876543
|
|
| >PTZ00235 DNA polymerase epsilon subunit B; Provisional | Back alignment and domain information |
|---|
Probab=90.39 E-value=1.1 Score=41.24 Aligned_cols=67 Identities=18% Similarity=0.117 Sum_probs=43.5
Q ss_pred ccEEEEEeCCCCCcCh-----HHHHHHhh-C----CCCCEEEEcCCCCCCc-----------HHHHHHHHc-----C---
Q 018902 38 VVRIVIVGDVHDDWDL-----QEDSKALQ-L----LKPDLVLFTGDFGNEN-----------VEIVQSVAE-----L--- 88 (349)
Q Consensus 38 ~mril~iSDlH~~~~~-----~~~~~~i~-~----~~pD~vI~~GDl~~~~-----------~~~l~~l~~-----l--- 88 (349)
..+|+++||+|++... +.+..... . ..|-++|++|+++... .+-.+.|+. .
T Consensus 27 ~~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp~L 106 (291)
T PTZ00235 27 RHNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFKLI 106 (291)
T ss_pred ceEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhChHH
Confidence 4689999999998653 22333332 1 2388999999987431 223333332 1
Q ss_pred --CCCEEEEcCCCCCCcc
Q 018902 89 --EFPKAVILGNHDSWKT 104 (349)
Q Consensus 89 --~~Pi~~V~GNHD~~~~ 104 (349)
...+++|||-.|-+..
T Consensus 107 ~~~s~fVFVPGpnDPw~s 124 (291)
T PTZ00235 107 LEHCYLIFIPGINDPCAC 124 (291)
T ss_pred HhcCeEEEECCCCCCCcC
Confidence 3568899999998653
|
|
| >COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion] | Back alignment and domain information |
|---|
Probab=88.60 E-value=0.97 Score=41.35 Aligned_cols=65 Identities=23% Similarity=0.285 Sum_probs=40.6
Q ss_pred CCCCCeEEEEeccCCCCCCCCCCCCCCC--CCCCCCCCC--CCHHHHHHHHHHHHhcCCCccEEEeCccCCC
Q 018902 183 TPDDHLVILLAHNGPSGLGSEPNDICGK--DWGFGGGDH--GDPDLAQAISLLKETTKLCIPLVVFGHMHKE 250 (349)
Q Consensus 183 ~~~~~~~Ilv~H~PP~~~g~~~~~~~~~--d~~~~~~~~--G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~ 250 (349)
....++++|+.|..=....++..++..+ |-+.++..| +.++ +.+|..+++ ++++-..+.||-|..
T Consensus 266 aadgrpv~LfqhyGwdtfsteawdpAsrT~Dd~Gsgaphww~a~e-r~all~~lq--GYNvvg~fhGhkhd~ 334 (392)
T COG5555 266 AADGRPVYLFQHYGWDTFSTEAWDPASRTLDDTGSGAPHWWPAPE-RGALLFFLQ--GYNVVGTFHGHKHDF 334 (392)
T ss_pred ccCCCceeehhhhCccceeccccCchhcccccCCCCCCCCCCCCC-cchHHHhhc--CceeEEecccccccc
Confidence 3457899999998644443444343332 323333333 3333 366777777 789999999999986
|
|
| >COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.42 E-value=16 Score=36.06 Aligned_cols=77 Identities=10% Similarity=0.081 Sum_probs=43.4
Q ss_pred HHHHHHHHHHhCCCCCCeEEEEeccCCCCC-CCCCCCCCCCCCCCCCCCC-CCHHHHHHHHHHHHhcCCCccEEEeCccC
Q 018902 171 ESAKRIYKVALGTPDDHLVILLAHNGPSGL-GSEPNDICGKDWGFGGGDH-GDPDLAQAISLLKETTKLCIPLVVFGHMH 248 (349)
Q Consensus 171 ~~~~~l~~~l~~~~~~~~~Ilv~H~PP~~~-g~~~~~~~~~d~~~~~~~~-G~~~~~~al~~l~~~~~~~~~lvl~GH~H 248 (349)
+|.+||.+.+... +..++|+-.-.| ++. -.... ....++......| |.+.-++.|..+++..+.+=.+||.|.+|
T Consensus 340 ~QeqWLk~~L~~S-katWnVia~q~~-~~~~~~d~~-~a~~~~~a~~D~wdGy~~~RerLl~fi~~~~~~N~V~LtgDvH 416 (522)
T COG3540 340 QQEQWLKRGLGAS-KATWNVIAQQMP-LGLVVFDGS-PATEGQEANADGWDGYPAGRERLLRFIADRKIRNTVVLTGDVH 416 (522)
T ss_pred HHHHHHHhhhhhc-chhhhhhhhhcc-eeEeecCCC-ccccCccccccCcCCCcccHHHHHHHHHhcCCCCcEEEechhH
Confidence 3456776666653 445677666653 222 00000 0001222222234 66666778888888666555799999999
Q ss_pred CC
Q 018902 249 KE 250 (349)
Q Consensus 249 ~~ 250 (349)
..
T Consensus 417 ~~ 418 (522)
T COG3540 417 YS 418 (522)
T ss_pred HH
Confidence 86
|
|
| >PRK01395 V-type ATP synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=80.51 E-value=2.4 Score=33.01 Aligned_cols=64 Identities=20% Similarity=0.310 Sum_probs=43.3
Q ss_pred ccEEEEEeCCCCCc--------------C---hHHHHHHhhCCCCCEEEEcCCCCCCcHHHHHHHHcCCCC-EEEEcCCC
Q 018902 38 VVRIVIVGDVHDDW--------------D---LQEDSKALQLLKPDLVLFTGDFGNENVEIVQSVAELEFP-KAVILGNH 99 (349)
Q Consensus 38 ~mril~iSDlH~~~--------------~---~~~~~~~i~~~~pD~vI~~GDl~~~~~~~l~~l~~l~~P-i~~V~GNH 99 (349)
++|++++|| +... . ..+.++.+...++..|+++=++.+...+.++.+.+...| ++.||++|
T Consensus 3 ~~kIaVIGD-~dtv~GFrLaGi~~~~v~~~ee~~~~i~~l~~~d~gII~Ite~~a~~i~~~i~~~~~~~~P~Il~IP~~~ 81 (104)
T PRK01395 3 MYKIGVVGD-KDSILPFKALGIDVFPVIDEQEAINTLRKLAMEDYGIIYITEQIAADIPETIERYDNQVLPAIILIPSNQ 81 (104)
T ss_pred ceeEEEEEC-HHHHHHHHHcCCeeEEecChHHHHHHHHHHhcCCcEEEEEcHHHHHHhHHHHHHhcCCCCCEEEEeCCCC
Confidence 468999999 4310 1 133455555667778998888887766777777655677 56799988
Q ss_pred CCC
Q 018902 100 DSW 102 (349)
Q Consensus 100 D~~ 102 (349)
=..
T Consensus 82 g~~ 84 (104)
T PRK01395 82 GSL 84 (104)
T ss_pred CCc
Confidence 743
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 Length = 228 | Back alignment and structure |
|---|
Score = 57.8 bits (139), Expect = 6e-10
Identities = 35/223 (15%), Positives = 68/223 (30%), Gaps = 39/223 (17%)
Query: 34 MSASVVRIVIVGDVHDDWDLQED-SKALQLLKPDLVLFTGDF------GNENVEIVQSVA 86
M +V I+ + D + E K D + G+ + + ++
Sbjct: 1 MRRTVRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILS 60
Query: 87 ELEFPKAVILGNHDSWKTQEFSGKKKDGVQLQLECLGEEHVAYRRLDFPTLKLSIVGGRP 146
E P A + G D+ + ++ V+L + H + P ++ VGG
Sbjct: 61 EAHLPTAYVPGPQDAPIWEYL--REAANVELVHPEMRNVHETFTFWRGP-YLVAGVGGEI 117
Query: 147 FSCGGQQIFRKRLLSVRYGVQDMDESAKRIYKVALGTPDDHLVILLAHNGPSGLGSEPND 206
G + ++RY + K +++ D+ I L H P
Sbjct: 118 ADEGEPEEHE----ALRYPAWVAEYRLKALWE-----LKDYPKIFLFHTMPY-------- 160
Query: 207 ICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHK 249
G + G ++A I LV+ +
Sbjct: 161 ------HKGLNEQGSHEVAHLIKTHNP------LLVLVAGKGQ 191
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 Length = 260 | Back alignment and structure |
|---|
Score = 55.5 bits (133), Expect = 5e-09
Identities = 26/250 (10%), Positives = 68/250 (27%), Gaps = 61/250 (24%)
Query: 34 MSASVVRIVIVGDVHDDWD-LQEDSKALQLLKPDLVLFTGDF------------------ 74
M +++ + + + +D L + + +PD+++ G+
Sbjct: 1 MGIMPRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARR 60
Query: 75 ----------GNENVEIVQSV----AELEFPKAVILGNHDSWKTQEFSGKKKDGVQLQLE 120
+ +E + EL V+ G +D+ +
Sbjct: 61 EPNRKVIHENEHYIIETLDKFFREIGELGVKTFVVPGKNDAPLKIFLRAAYEAET----- 115
Query: 121 CLGEEHVAYRRLDFPTLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMDESAKRIYKVA 180
V + + ++G + + ++Y ++ K + ++
Sbjct: 116 AYPNIRVLHEGFAGWRGEFEVIGFGGLLTEHE---FEEDFVLKYPRWYVEYILKFVNEL- 171
Query: 181 LGTPDDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDH-GDPDLAQAISLLKETTKLCI 239
++ + + P G D H G + I L
Sbjct: 172 ----KPRRLVTIFYTPPIGEFV--------DRTPEDPKHHGSAVVNTIIK------SLNP 213
Query: 240 PLVVFGHMHK 249
+ + GH+ K
Sbjct: 214 EVAIVGHVGK 223
|
| >3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* Length = 296 | Back alignment and structure |
|---|
Score = 51.9 bits (123), Expect = 1e-07
Identities = 41/251 (16%), Positives = 69/251 (27%), Gaps = 34/251 (13%)
Query: 32 PAMSASVVRIVIVGDVHDDWDLQEDSKALQLLKPDLVLFTGDFGNEN--VEIVQSVAELE 89
A R V + D + +Q+ D++L TGDF E+ + L
Sbjct: 53 TPKPAGHTRFVCISDTRSR------TDGIQMPYGDILLHTGDFTELGLPSEVKKFNDWLG 106
Query: 90 F----PKAVILGNHDSWKTQEFSGKKKDGVQLQLECLGEEHVAYRRLDFPTLKLSIVGGR 145
K VI GNH+ +EF + + + L SI
Sbjct: 107 NLPYEYKIVIAGNHELTFDKEFMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQD 166
Query: 146 PFSCGGQQIFRKRLLSVRYGVQDMDESAKRIYKVALGTPDDHLVILLAHNGPSGLGSEPN 205
+ + + + + IL+ H P G
Sbjct: 167 SEVTVKGFRIYGAPWTPWFNGWGFNLPRGQSLLDKWNLIPEGTDILMTHGPPLGF----- 221
Query: 206 DICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKELAYGNGLRKMIVVGA 265
G +L + ++ L VFG +H+ YG +
Sbjct: 222 ---RDWVPKELQRVGCVELLNTVQ-----RRVRPKLHVFGGIHE--GYG-------TMTD 264
Query: 266 DSTIYLNGAIV 276
T Y+N +
Sbjct: 265 GYTTYINASTC 275
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} Length = 443 | Back alignment and structure |
|---|
Score = 46.0 bits (108), Expect = 1e-05
Identities = 47/299 (15%), Positives = 82/299 (27%), Gaps = 67/299 (22%)
Query: 1 MLSALSHAQALSFFSHSFLCLSTSPKTARS-APAMSASVVRIVIVGDVH----------- 48
M+ + C S S KT + AP + +V+ DVH
Sbjct: 1 MIRFFKIVTPILLSISLVACSSASGKTEKITAPIEKDRNLSMVVTTDVHYFAPSLTDNGK 60
Query: 49 ---------DDWDLQEDSKALQLL-------KPDLVLFTGDFGN--------ENVEIVQS 84
D L + K D+++ +GD N E + +
Sbjct: 61 AFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNNGEKTSHEELAKKLTQ 120
Query: 85 VAELEFPKAVILGNHDSWKTQEFSGKKKDGVQLQLECLGEEHVAYRRLDFPTLKLSIVGG 144
V + V+ GNHD ++ K + QL + + + DF
Sbjct: 121 VEKNGTQVFVVPGNHDIN--NPWARKFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDE 178
Query: 145 RPFSCGGQQIFRKRLL---SVRYGVQDM-----------DESAKRIYKV-ALGTPDDHLV 189
S + LL + Y + I + AL + +
Sbjct: 179 FSLSYLAAPSSKVWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKNGAKL 238
Query: 190 ILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMH 248
I + H+ + ++ Q I L E + + GH+H
Sbjct: 239 IPVLHHNLTDHNDVIQKGYTINYN-----------QQVIDALTEGA---MDFSLSGHIH 283
|
| >3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* Length = 270 | Back alignment and structure |
|---|
Score = 40.4 bits (94), Expect = 5e-04
Identities = 20/134 (14%), Positives = 37/134 (27%), Gaps = 15/134 (11%)
Query: 32 PAMSASVVRIVIVGDVHDDWD-LQEDSKALQLLKPDLVLFTGDF---GNENVEIVQSVAE 87
+ +I ++ D+H + L+ + L D GD G I+ + +
Sbjct: 5 HHHHMDMTKIALLSDIHGNTTALEAVLADARQLGVDEYWLLGDILMPGTGRRRILDLLDQ 64
Query: 88 LEFPKAVILGNHDSW----------KTQEFSGKKKDGVQLQLECLGEEHVAYRRLDFPTL 137
L A +LGN + T+ Q LE + E + +
Sbjct: 65 LPIT-ARVLGNWEDSLWHGVRKELDSTRPSQRYLLRQCQYVLEEISLEEIEVLHNQPLQI 123
Query: 138 KLSIVGGRPFSCGG 151
Sbjct: 124 HRQFGDLTVGISHH 137
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 349 | |||
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 99.91 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 99.9 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 99.9 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 99.89 | |
| 3rl5_A | 296 | Metallophosphoesterase mpped2; alpha-beta fold, me | 99.87 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 99.85 | |
| 1z2w_A | 192 | Vacuolar protein sorting 29; VPS29, retromer, phos | 99.85 | |
| 2a22_A | 215 | Vacuolar protein sorting 29; alpha-beta-BETA-alpha | 99.84 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 99.82 | |
| 1s3l_A | 190 | Hypothetical protein MJ0936; phosphodiesterase, nu | 99.82 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 99.82 | |
| 3av0_A | 386 | DNA double-strand break repair protein MRE11; DNA | 99.81 | |
| 2q8u_A | 336 | Exonuclease, putative; structural genomics, joint | 99.8 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 99.78 | |
| 4fbk_A | 472 | DNA repair and telomere maintenance protein NBS1, | 99.78 | |
| 3t1i_A | 431 | Double-strand break repair protein MRE11A; DNA rep | 99.77 | |
| 3ck2_A | 176 | Conserved uncharacterized protein (predicted phosp | 99.77 | |
| 3tho_B | 379 | Exonuclease, putative; adenosine triphosphate, bac | 99.77 | |
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 99.76 | |
| 2kkn_A | 178 | Uncharacterized protein; protein phosphatase 2A ho | 99.76 | |
| 1nnw_A | 252 | Hypothetical protein; structural genomics, PSI, pr | 99.76 | |
| 4fbw_A | 417 | DNA repair protein RAD32; DNA double-strand break | 99.76 | |
| 3qfm_A | 270 | SAPH, putative uncharacterized protein; sandwich f | 99.73 | |
| 1ii7_A | 333 | MRE11 nuclease; RAD50, DNA double-strand break rep | 99.73 | |
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 99.72 | |
| 3rqz_A | 246 | Metallophosphoesterase; PSI-biology, midwest cente | 99.71 | |
| 1su1_A | 208 | Hypothetical protein YFCE; structural genomics, ph | 99.69 | |
| 1xm7_A | 195 | Hypothetical protein AQ_1665; structural genomics, | 99.66 | |
| 1hp1_A | 516 | 5'-nucleotidase; metallophosphatase, dinuclear, me | 99.45 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 99.42 | |
| 2wdc_A | 562 | SOXB, sulfur oxidation protein SOXB; sulfur-sulfur | 99.3 | |
| 3qfk_A | 527 | Uncharacterized protein; structural genomics, cent | 99.27 | |
| 2z1a_A | 552 | 5'-nucleotidase; metal-binding, nucleotide-binding | 99.23 | |
| 2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative d | 99.13 | |
| 3ive_A | 509 | Nucleotidase; structural genomics, PSI-2, protein | 99.13 | |
| 3ztv_A | 579 | NAD nucleotidase, NADN; hydrolase, NAD pyrophospha | 99.11 | |
| 2yeq_A | 527 | Apased, PHOD, alkaline phosphatase D; hydrolase, p | 99.11 | |
| 4h2g_A | 546 | 5'-nucleotidase; dimer, hydrolase, phosphatase, ex | 99.0 | |
| 3gve_A | 341 | YFKN protein; alpha-beta-BETA-alpha sandwich, stru | 98.9 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 98.85 | |
| 3jyf_A | 339 | 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- n | 98.84 | |
| 3c9f_A | 557 | 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, p | 98.78 | |
| 2ie4_C | 309 | PP2A-alpha;, serine/threonine-protein phosphatase | 98.69 | |
| 2dfj_A | 280 | Diadenosinetetraphosphatase; helices and strands m | 98.64 | |
| 1t71_A | 281 | Phosphatase, conserved HYPO; crystal, X-RAY crysta | 98.63 | |
| 1t70_A | 255 | Phosphatase; crystal, X-RAY crystallography, struc | 98.54 | |
| 4h1s_A | 530 | 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo | 98.5 | |
| 2z06_A | 252 | Putative uncharacterized protein TTHA0625; metal b | 98.47 | |
| 2z72_A | 342 | Protein-tyrosine-phosphatase; cold-active enzyme, | 98.26 | |
| 1fjm_A | 330 | Protein serine/threonine phosphatase-1 (alpha ISO | 98.23 | |
| 3h63_A | 315 | Serine/threonine-protein phosphatase 5; metalloenz | 98.19 | |
| 3icf_A | 335 | PPT, serine/threonine-protein phosphatase T; IRO m | 98.09 | |
| 3e7a_A | 299 | PP-1A, serine/threonine-protein phosphatase PP1-al | 98.05 | |
| 3ll8_A | 357 | Serine/threonine-protein phosphatase 2B catalytic | 97.98 | |
| 1aui_A | 521 | Calcineurin, serine/threonine phosphatase 2B; hydr | 97.89 | |
| 3e0j_A | 476 | DNA polymerase subunit delta-2; DNA polymerase del | 96.27 | |
| 3flo_A | 460 | DNA polymerase alpha subunit B; protein-protein co | 93.12 | |
| 2lpm_A | 123 | Two-component response regulator; transcription re | 88.73 |
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.91 E-value=3.1e-23 Score=187.74 Aligned_cols=211 Identities=13% Similarity=0.145 Sum_probs=125.8
Q ss_pred CccEEEEEeCCCCCcCh-HHHHHHhhCCCCCEEEEcCCCCCCcH--------------------------------HHHH
Q 018902 37 SVVRIVIVGDVHDDWDL-QEDSKALQLLKPDLVLFTGDFGNENV--------------------------------EIVQ 83 (349)
Q Consensus 37 ~~mril~iSDlH~~~~~-~~~~~~i~~~~pD~vI~~GDl~~~~~--------------------------------~~l~ 83 (349)
.+|||+++||+|++... +++++.++..++|+||++||+++... ++++
T Consensus 4 ~~mri~~iSDlH~~~~~~~~~l~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~ 83 (260)
T 2yvt_A 4 MPRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFFR 83 (260)
T ss_dssp CCCEEEEEECCTTCGGGHHHHHHHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEeecCCChHHHHHHHHHHHhcCCCEEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHHHHHHHHHHHHHH
Confidence 36899999999998764 66777777779999999999998642 2455
Q ss_pred HHHcCCCCEEEEcCCCCCCccccccccchhHHHHHHHHhCC----cceeeEE-eecCCceEEEeCCeeeecCCchhhhhh
Q 018902 84 SVAELEFPKAVILGNHDSWKTQEFSGKKKDGVQLQLECLGE----EHVAYRR-LDFPTLKLSIVGGRPFSCGGQQIFRKR 158 (349)
Q Consensus 84 ~l~~l~~Pi~~V~GNHD~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~-l~~~~~~i~~~g~~~~~~~g~~~~~~~ 158 (349)
.|.+++.|+++|+||||..... .+...+...+. ....... +...++.+.++|+.... .
T Consensus 84 ~l~~~~~pv~~v~GNHD~~~~~--------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~g~~~~~~~-~-------- 146 (260)
T 2yvt_A 84 EIGELGVKTFVVPGKNDAPLKI--------FLRAAYEAETAYPNIRVLHEGFAGWRGEFEVIGFGGLLTE-H-------- 146 (260)
T ss_dssp HHHTTCSEEEEECCTTSCCHHH--------HHHHHHHTTTTCTTEEECSSEEEEETTTEEEEEECSEEES-S--------
T ss_pred HHHhcCCcEEEEcCCCCchhhh--------hHHHHhhhccCCcceEEecCcceEEECCEEEEecCCCcCC-C--------
Confidence 6666678999999999975321 11223332221 1111111 33445555555543211 0
Q ss_pred hhhhccCCcchH----HH-HHHHHHHHhCCCCCCeEEEEeccCCCCCCCCCCCCCCCCCC-CCCCCCCCHHHHHHHHHHH
Q 018902 159 LLSVRYGVQDMD----ES-AKRIYKVALGTPDDHLVILLAHNGPSGLGSEPNDICGKDWG-FGGGDHGDPDLAQAISLLK 232 (349)
Q Consensus 159 ~~~~~~~~~~~~----~~-~~~l~~~l~~~~~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~-~~~~~~G~~~~~~al~~l~ 232 (349)
.+..+++. +. ..++ +.+.+.+ ..++|+++|+||++... |+. ......|+. ++.+++
T Consensus 147 ----~~~~~~~~~~~~~~~~~~l-~~l~~~~-~~~~Il~~H~pp~~~~~--------d~~~~~~~~~~~~----~l~~~~ 208 (260)
T 2yvt_A 147 ----EFEEDFVLKYPRWYVEYIL-KFVNELK-PRRLVTIFYTPPIGEFV--------DRTPEDPKHHGSA----VVNTII 208 (260)
T ss_dssp ----CCBSSSSCEEEHHHHHHHG-GGGGGSC-CCEEEEEESSCCSCSST--------TCBTTBSCCCSCH----HHHHHH
T ss_pred ----CcCHHHHhhcchhhHHHHH-HHHHhcC-CCCEEEEECCCcccccc--------ccCcccccccCcH----HHHHHH
Confidence 01111111 11 1222 3333333 35689999999975411 111 111123664 444555
Q ss_pred HhcCCCccEEEeCccCCCcccCCcceEEEEEcCCceEEEeecccceeeccCCccCCCCCcccccccccCCCCCCceeeEE
Q 018902 233 ETTKLCIPLVVFGHMHKELAYGNGLRKMIVVGADSTIYLNGAIVPRVKRLIDEQGADSSSVSNKTSFLRPDSKGTVRAFT 312 (349)
Q Consensus 233 ~~~~~~~~lvl~GH~H~~~~~~~g~~~~~~~~~~gt~yvn~g~~pr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 312 (349)
++ ++++++++||+| . +..+. +++.++|+|++.. .+|+
T Consensus 209 ~~--~~~~~vl~GH~H-~-----~~~~~-----~~~~~in~Gs~~~------------------------------g~~~ 245 (260)
T 2yvt_A 209 KS--LNPEVAIVGHVG-K-----GHELV-----GNTIVVNPGEFEE------------------------------GRYA 245 (260)
T ss_dssp HH--HCCSEEEECSSC-C-----EEEEE-----TTEEEEECCBGGG------------------------------TEEE
T ss_pred HH--hCCCEEEECCcc-C-----CcEEe-----CCEEEEeCCCCCC------------------------------CceE
Confidence 52 369999999999 4 23344 6889999998621 2799
Q ss_pred EEEEeCCeEeEEE
Q 018902 313 VVEILDGRIDKIA 325 (349)
Q Consensus 313 ~v~i~~~~v~~~~ 325 (349)
+|++++++++..+
T Consensus 246 ii~~~~~~~~~~~ 258 (260)
T 2yvt_A 246 FLDLTQHKIKLEQ 258 (260)
T ss_dssp EEETTTTEEEEEE
T ss_pred EEEEcCCEEEeee
Confidence 9999998876543
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.5e-22 Score=179.21 Aligned_cols=188 Identities=16% Similarity=0.104 Sum_probs=107.4
Q ss_pred CccEEEEEeCCCCCcCh-HHHHHHhhCCCCCEEEEcCCCCCCc------HHHHHHHHcCCCCEEEEcCCCCCCccccccc
Q 018902 37 SVVRIVIVGDVHDDWDL-QEDSKALQLLKPDLVLFTGDFGNEN------VEIVQSVAELEFPKAVILGNHDSWKTQEFSG 109 (349)
Q Consensus 37 ~~mril~iSDlH~~~~~-~~~~~~i~~~~pD~vI~~GDl~~~~------~~~l~~l~~l~~Pi~~V~GNHD~~~~~~~~~ 109 (349)
.+|||+++||+|++... +++++.++..++|+||++||+++.. .++++.|.+++.|+++|+||||....
T Consensus 4 ~~mri~~iSD~H~~~~~~~~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~l~~~~~pv~~v~GNHD~~~~----- 78 (228)
T 1uf3_A 4 TVRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEAHLPTAYVPGPQDAPIW----- 78 (228)
T ss_dssp CCCEEEEEECCTTCHHHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGGCSCEEEECCTTSCSHH-----
T ss_pred ceEEEEEEeeccCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhcCCcEEEECCCCCchhH-----
Confidence 35899999999998653 4566666666899999999999753 24777787778899999999997532
Q ss_pred cchhHHHHHH--HH--hCCcceeeEEeecC-CceEEEeCCeeeecCCchhhhhhhhhhccCCcch----HHHHHHHHHHH
Q 018902 110 KKKDGVQLQL--EC--LGEEHVAYRRLDFP-TLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDM----DESAKRIYKVA 180 (349)
Q Consensus 110 ~~~~~~~~~l--~~--~~~~~~~~~~l~~~-~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~----~~~~~~l~~~l 180 (349)
..+...+ .. .+............ ++.+.++++... ... .+..+++ .+......+.+
T Consensus 79 ---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~g~~~~~~-~~~-----------~~~~~~~~~~~~~~~~~~~~~l 143 (228)
T 1uf3_A 79 ---EYLREAANVELVHPEMRNVHETFTFWRGPYLVAGVGGEIA-DEG-----------EPEEHEALRYPAWVAEYRLKAL 143 (228)
T ss_dssp ---HHHHHHHHHHHHCTTEEECBTSEEEETTTEEEEEECSEEE-SSS-----------CCBSSSSCEEEHHHHHHHHGGG
T ss_pred ---HHHHhhhhhhccCcceEEcccceEeeCCCcEEecCCCCcC-CCC-----------ccChhhcccchhhhHHHHHHHH
Confidence 0111111 00 01100000011112 445555554211 000 0111111 11111222333
Q ss_pred hCCCCCCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCccEEEeCccCCCcccCCcceEE
Q 018902 181 LGTPDDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKELAYGNGLRKM 260 (349)
Q Consensus 181 ~~~~~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~~~~~g~~~~ 260 (349)
.+.+ +.++|+++|+||+... ....|+.. +.+++++ .+++++++||+| . +..+.
T Consensus 144 ~~~~-~~~~il~~H~p~~~~~--------------~~~~~~~~----~~~~~~~--~~~~~~~~GH~H-~-----~~~~~ 196 (228)
T 1uf3_A 144 WELK-DYPKIFLFHTMPYHKG--------------LNEQGSHE----VAHLIKT--HNPLLVLVAGKG-Q-----KHEML 196 (228)
T ss_dssp GGSC-SCCEEEEESSCBCBTT--------------TBTTSBHH----HHHHHHH--HCCSEEEECCSS-C-----EEEEE
T ss_pred HhCC-CCCeEEEEccCcccCC--------------ccccCHHH----HHHHHHH--hCCCEEEEcccc-c-----Ccccc
Confidence 3333 3579999999986530 01124533 4445542 369999999999 4 22334
Q ss_pred EEEcCCceEEEeeccc
Q 018902 261 IVVGADSTIYLNGAIV 276 (349)
Q Consensus 261 ~~~~~~gt~yvn~g~~ 276 (349)
+++.++|+|++
T Consensus 197 -----~~~~~in~Gs~ 207 (228)
T 1uf3_A 197 -----GASWVVVPGDL 207 (228)
T ss_dssp -----TTEEEEECCBG
T ss_pred -----CCceEEEeccc
Confidence 68999999986
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A | Back alignment and structure |
|---|
Probab=99.90 E-value=4.6e-22 Score=181.00 Aligned_cols=225 Identities=18% Similarity=0.169 Sum_probs=130.6
Q ss_pred cEEEEEeCCCCCcC-------------hHHHHHHhhCC--CCCEEEEcCCCCCCc-----HHHHHHHHcCCCCEEEEcCC
Q 018902 39 VRIVIVGDVHDDWD-------------LQEDSKALQLL--KPDLVLFTGDFGNEN-----VEIVQSVAELEFPKAVILGN 98 (349)
Q Consensus 39 mril~iSDlH~~~~-------------~~~~~~~i~~~--~pD~vI~~GDl~~~~-----~~~l~~l~~l~~Pi~~V~GN 98 (349)
|||+++||+|++.. .+++++.+++. ++|+||++||+++.. ..+.+.+.++++|+++|+||
T Consensus 1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~l~~p~~~v~GN 80 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGRPEEYQVARQILGSLNYPLYLIPGN 80 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCCHHHHHHHHHHHTTCSSCEEEECCT
T ss_pred CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 79999999999851 24566667654 689999999999753 24566677778999999999
Q ss_pred CCCCccccccccchhHHHHHHHHh----CCc-ceeeEEeecCCceEEEeCCeeeecCCchhhhhhhhhhccCCcchHHHH
Q 018902 99 HDSWKTQEFSGKKKDGVQLQLECL----GEE-HVAYRRLDFPTLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMDESA 173 (349)
Q Consensus 99 HD~~~~~~~~~~~~~~~~~~l~~~----~~~-~~~~~~l~~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 173 (349)
||.... +.+.+... ... ...+...+..++.+.++++... +. ..... ..+++
T Consensus 81 HD~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ld~~~~---~~-------~~~~~----~~~~~ 136 (274)
T 3d03_A 81 HDDKAL----------FLEYLQPLCPQLGSDANNMRCAVDDFATRLLFIDSSRA---GT-------SKGWL----TDETI 136 (274)
T ss_dssp TSCHHH----------HHHHHGGGSGGGCSCGGGCCEEECSSSSEEEECCCCCT---TC-------SSBCC----CHHHH
T ss_pred CCCHHH----------HHHHhhhhhcCcccCCCceEEEEEeCCEEEEEEeCCCC---CC-------CCCee----CHHHH
Confidence 997421 11222110 110 0112233445566665554311 00 00011 12345
Q ss_pred HHHHHHHhCCCCCCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCccEEEeCccCCCccc
Q 018902 174 KRIYKVALGTPDDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKELAY 253 (349)
Q Consensus 174 ~~l~~~l~~~~~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~~~ 253 (349)
+|+.+.+... +++++|+++|+||+..+....+. ....+. +.+.+++++.. +++++++||+|....
T Consensus 137 ~wl~~~l~~~-~~~~~iv~~H~p~~~~~~~~~~~--------~~~~~~----~~l~~~l~~~~-~v~~vl~GH~H~~~~- 201 (274)
T 3d03_A 137 SWLEAQLFEG-GDKPATIFMHHPPLPLGNAQMDP--------IACENG----HRLLALVERFP-SLTRIFCGHNHSLTM- 201 (274)
T ss_dssp HHHHHHHHHH-TTSCEEEEESSCSSCCSCTTTGG--------GSBTTT----HHHHHHHHHCT-TEEEEEECSSSSCEE-
T ss_pred HHHHHHHHhC-CCCCEEEEECCCCcccCCcccCc--------ccCcCH----HHHHHHHHhCC-CceEEEeCCCCCchh-
Confidence 6666665543 35679999999997653221110 001122 44556666321 699999999999832
Q ss_pred CCcceEEEEEcCCc-eEEEeecccceeeccCCccCCCCCcccccccccCCCCCCceeeEEEEEEeCCeEeEEE
Q 018902 254 GNGLRKMIVVGADS-TIYLNGAIVPRVKRLIDEQGADSSSVSNKTSFLRPDSKGTVRAFTVVEILDGRIDKIA 325 (349)
Q Consensus 254 ~~g~~~~~~~~~~g-t~yvn~g~~pr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~v~i~~~~v~~~~ 325 (349)
... +| +.++|+|+........+. . ..++ .....+|.++++++++++...
T Consensus 202 ----~~~-----~g~~~~~~pg~~~~~~~~~~~--~-------~~~~-----~~~~~gy~i~~i~~~~~~~~~ 251 (274)
T 3d03_A 202 ----TQY-----RQALISTLPGTVHQVPYCHAD--T-------DPYY-----DLSPASCLMHRQVGEQWVSYQ 251 (274)
T ss_dssp ----EEE-----TTEEEEECCCSSCBCCCCSSC--C-------SCEE-----BCCCCEEEEEEEETTEEEEEE
T ss_pred ----heE-----CCEEEEEcCCcceeeccCCCc--c-------cccc-----ccCCCceEEEEEeCCcEEEEE
Confidence 112 34 677899886433222110 0 0000 135689999999999876544
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A | Back alignment and structure |
|---|
Probab=99.89 E-value=3.4e-22 Score=186.86 Aligned_cols=230 Identities=15% Similarity=0.108 Sum_probs=134.3
Q ss_pred CCccEEEEEeCCCCCcC-------------hHHHHHHhhC--CCCCEEEEcCCCCCCc--------HHHHHHH-HcCCCC
Q 018902 36 ASVVRIVIVGDVHDDWD-------------LQEDSKALQL--LKPDLVLFTGDFGNEN--------VEIVQSV-AELEFP 91 (349)
Q Consensus 36 ~~~mril~iSDlH~~~~-------------~~~~~~~i~~--~~pD~vI~~GDl~~~~--------~~~l~~l-~~l~~P 91 (349)
.++|||+++||+|++.. .+++++.+++ .++|+||++||+++.. .++++.+ .++++|
T Consensus 23 ~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~l~~~~~~p 102 (330)
T 3ib7_A 23 RPDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQLGAE 102 (330)
T ss_dssp CCSEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTCCHHHHHHHHHHHHHHHHHHTCE
T ss_pred CCCeEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHhhcCCC
Confidence 55799999999998421 2456677765 7999999999999852 1233333 224789
Q ss_pred EEEEcCCCCCCccccccccchhHHHHHHHHhCC-cceeeEEeecCCceEEEeCCeeeecCCchhhhhhhhhhccCCcchH
Q 018902 92 KAVILGNHDSWKTQEFSGKKKDGVQLQLECLGE-EHVAYRRLDFPTLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMD 170 (349)
Q Consensus 92 i~~V~GNHD~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~l~~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~ 170 (349)
+++|+||||.... +...+..... ....+..++..++.+.++++... +. ....-..
T Consensus 103 v~~v~GNHD~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~---~~-----------~~~~~~~ 158 (330)
T 3ib7_A 103 LVWVMGNHDDRAE----------LRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVP---GH-----------HHGEIRA 158 (330)
T ss_dssp EEECCCTTSCHHH----------HHHHHHCCCCCCSCCCEEEEETTEEEEECCCCCT---TC-----------CSBCCCH
T ss_pred EEEeCCCCCCHHH----------HHHHhcccccccCCcceEEEeCCEEEEEecCCCC---CC-----------CCCccCH
Confidence 9999999997321 2222321111 11112234445566655554311 00 0111123
Q ss_pred HHHHHHHHHHhCCCCCCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCccEEEeCccCCC
Q 018902 171 ESAKRIYKVALGTPDDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKE 250 (349)
Q Consensus 171 ~~~~~l~~~l~~~~~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~ 250 (349)
++++|+.+.+..... ..+|+++||||+..+.. +.......+ .+.+..+++ +++++++++||+|..
T Consensus 159 ~q~~wl~~~l~~~~~-~~~iv~~Hh~p~~~~~~--------~~~~~~~~~----~~~l~~~l~--~~~v~~v~~GH~H~~ 223 (330)
T 3ib7_A 159 SQLGWLAEELATPAP-DGTILALHHPPIPSVLD--------MAVTVELRD----QAALGRVLR--GTDVRAILAGHLHYS 223 (330)
T ss_dssp HHHHHHHHHTTSCCT-TCEEEECSSCSSCCSSG--------GGGGGSBSC----HHHHHHHHT--TSSEEEEEECSSSSC
T ss_pred HHHHHHHHHHHhccc-CCeEEEEECCCCCCCcc--------ccccccccC----HHHHHHHHh--ccCceEEEECCCCCc
Confidence 456788777776654 45899999999765221 111000112 255666776 568999999999998
Q ss_pred cccCCcceEEEEEcCCceEEEeecccceeeccCCccCCCCCcccccccccCCCCCCceeeEEEEEEeCCeEeEEEEE
Q 018902 251 LAYGNGLRKMIVVGADSTIYLNGAIVPRVKRLIDEQGADSSSVSNKTSFLRPDSKGTVRAFTVVEILDGRIDKIAER 327 (349)
Q Consensus 251 ~~~~~g~~~~~~~~~~gt~yvn~g~~pr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~v~i~~~~v~~~~~~ 327 (349)
. .... +|+.|+|+|+.-.........+ ..+. .....+|.+|++++++++.+...
T Consensus 224 ~-----~~~~-----~g~~~~~~gs~~~~~~~~~~~g--------~~~~-----~~~~~gy~iv~i~~~~~~~~~v~ 277 (330)
T 3ib7_A 224 T-----NATF-----VGIPVSVASATCYTQDLTVAAG--------GTRG-----RDGAQGCNLVHVYPDTVVHSVIP 277 (330)
T ss_dssp E-----EEEE-----TTEEEEECCCSSCEECTTSCTT--------CCCE-----ESCSCEEEEEEECSSCEEEEEEE
T ss_pred c-----cceE-----CCEEEEecCcceeccCCCCCCc--------ceec-----cCCCCceEEEEEECCCeEEEEec
Confidence 3 2233 6888888887533221111000 0000 13456899999999988665433
|
| >3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.8e-21 Score=178.65 Aligned_cols=197 Identities=22% Similarity=0.264 Sum_probs=114.5
Q ss_pred CCCccEEEEEeCCCCCcChHHHHHHhhCCCCCEEEEcCCCCCCc-----HHHHHHHHcCC-CCEEEEcCCCCCCcccccc
Q 018902 35 SASVVRIVIVGDVHDDWDLQEDSKALQLLKPDLVLFTGDFGNEN-----VEIVQSVAELE-FPKAVILGNHDSWKTQEFS 108 (349)
Q Consensus 35 ~~~~mril~iSDlH~~~~~~~~~~~i~~~~pD~vI~~GDl~~~~-----~~~l~~l~~l~-~Pi~~V~GNHD~~~~~~~~ 108 (349)
..+.|||+++||+|...... ...++|+||++|||++.. ..+++.|.+++ .++++|+||||.+....+.
T Consensus 56 ~~~~mri~~iSD~H~~~~~l------~i~~~D~vi~aGDl~~~g~~~e~~~~~~~L~~l~~~~v~~V~GNHD~~~d~~~~ 129 (296)
T 3rl5_A 56 PAGHTRFVCISDTRSRTDGI------QMPYGDILLHTGDFTELGLPSEVKKFNDWLGNLPYEYKIVIAGNHELTFDKEFM 129 (296)
T ss_dssp CTTEEEEEEEBCCTTCCTTC------CCCSCSEEEECSCCSSSCCHHHHHHHHHHHHTSCCSEEEECCCTTCGGGCHHHH
T ss_pred CCCCeEEEEEeeCCCCcchh------ccCCCCEEEECCcccCCCCHHHHHHHHHHHHhCCCCeEEEEcCCcccccchhhh
Confidence 35669999999999987531 335899999999999852 35677788776 4589999999986543211
Q ss_pred ccc----hh---HH----HHHH---HH-h-CCcceeeEEeecCCceEEEeCCeeeecCCchhhhhhhhhhccCCcchHHH
Q 018902 109 GKK----KD---GV----QLQL---EC-L-GEEHVAYRRLDFPTLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMDES 172 (349)
Q Consensus 109 ~~~----~~---~~----~~~l---~~-~-~~~~~~~~~l~~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 172 (349)
... .. .+ .... .. + +..++.-......++++.+.+.+|+...+. +......
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~~~~i~Gl~i~Gsp~tP~~~~~~-----------f~~~~~~-- 196 (296)
T 3rl5_A 130 ADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDSEVTVKGFRIYGAPWTPWFNGWG-----------FNLPRGQ-- 196 (296)
T ss_dssp HHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSSEEEEETTEEEEEECCBCC--CCT-----------TBCCTTH--
T ss_pred hhhhcccccccccccccccchhhhHhhhcCCeEEecCCcEEECCEEEEEecCCCCCCCcC-----------CCcchHH--
Confidence 000 00 00 0000 00 0 111222233344555555444455443222 2222221
Q ss_pred HHHHHHHHhCCCCCCeEEEEeccCCCCCCCCCCCCCCCCCCC-CCCCCCCHHHHHHHHHHHHhcCCCccEEEeCccCCCc
Q 018902 173 AKRIYKVALGTPDDHLVILLAHNGPSGLGSEPNDICGKDWGF-GGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKEL 251 (349)
Q Consensus 173 ~~~l~~~l~~~~~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~-~~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~ 251 (349)
++.+....++ ....||++|.||++.. |+.. .+...|+..+.+.+. + +.++++++|||+|..
T Consensus 197 --~~~~~~~~ip-~~~dILvTH~PP~g~~---------D~~~~~~~~~G~~~L~~~i~---~--~~~p~l~v~GH~H~~- 258 (296)
T 3rl5_A 197 --SLLDKWNLIP-EGTDILMTHGPPLGFR---------DWVPKELQRVGCVELLNTVQ---R--RVRPKLHVFGGIHEG- 258 (296)
T ss_dssp --HHHHHHTTSC-TTCSEEEESSCBTTSS---------CEEGGGTEECSBHHHHHHHH---H--TTCCSEEEECSCGGG-
T ss_pred --HHHHHHhhCC-CCCeEEEECCCccccc---------cccccccCcCChHHHHHHHH---H--hcCCCEEEECCccCC-
Confidence 2222333443 4568999999998873 2221 122348855544432 3 356999999999998
Q ss_pred ccCCcceEEEEEcCCceEEEeeccc
Q 018902 252 AYGNGLRKMIVVGADSTIYLNGAIV 276 (349)
Q Consensus 252 ~~~~g~~~~~~~~~~gt~yvn~g~~ 276 (349)
.+..+. ++|.|+|+|++
T Consensus 259 ---~~~~~~-----g~t~vvNpGs~ 275 (296)
T 3rl5_A 259 ---YGTMTD-----GYTTYINASTC 275 (296)
T ss_dssp ---CEEEEC-----SSCEEEECBCS
T ss_pred ---CceEEE-----CCEEEEECCcC
Confidence 444444 78999999997
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 | Back alignment and structure |
|---|
Probab=99.85 E-value=1.7e-20 Score=174.07 Aligned_cols=233 Identities=12% Similarity=0.120 Sum_probs=131.1
Q ss_pred CccEEEEEeCCCCCcC--------------------hHHHHHHhhCCCCCEEEEcCCCCCCcH-----------HHHHHH
Q 018902 37 SVVRIVIVGDVHDDWD--------------------LQEDSKALQLLKPDLVLFTGDFGNENV-----------EIVQSV 85 (349)
Q Consensus 37 ~~mril~iSDlH~~~~--------------------~~~~~~~i~~~~pD~vI~~GDl~~~~~-----------~~l~~l 85 (349)
..|||+++||+|++.. .+++++.+++.+||+||++||+++... .+.+.+
T Consensus 4 ~~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~~~~~~~~~~~~~~~~~~~~l 83 (322)
T 2nxf_A 4 PVFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAEL 83 (322)
T ss_dssp CSEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHHH
T ss_pred CceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccCCCCCcchHHHHHHHHHHHHH
Confidence 5699999999999762 134556666689999999999998632 245566
Q ss_pred HcCCCCEEEEcCCCCCCccccccccchhHHHHHHHH------------hCCcceeeEEeec-CCceEEEeCCeeeecCCc
Q 018902 86 AELEFPKAVILGNHDSWKTQEFSGKKKDGVQLQLEC------------LGEEHVAYRRLDF-PTLKLSIVGGRPFSCGGQ 152 (349)
Q Consensus 86 ~~l~~Pi~~V~GNHD~~~~~~~~~~~~~~~~~~l~~------------~~~~~~~~~~l~~-~~~~i~~~g~~~~~~~g~ 152 (349)
.++++|+++|+||||.+.... ..+...+.. +......+..++. +++.+.++++..+...+.
T Consensus 84 ~~~~~p~~~v~GNHD~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~i~ld~~~~~~~~~ 157 (322)
T 2nxf_A 84 DACSVDVHHVWGNHEFYNFSR------PSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGR 157 (322)
T ss_dssp HTTCSEEEECCCHHHHHHCCH------HHHHTSTTCCCC------CEECGGGTCCCEEEEEETTEEEEECCTTSBCSSSS
T ss_pred HhcCCcEEEecCCCCcccCCH------HHHhhhhCCcccccccccccccCCCCceEEEEecCCCEEEEEEcCceeccccc
Confidence 667889999999999742110 011111100 0000011122232 455566555543321111
Q ss_pred hh----hh--hhhhh-------------------hc---cCCcchHHHHHHHHHHHhCCCC-CCeEEEEeccCCCCCCCC
Q 018902 153 QI----FR--KRLLS-------------------VR---YGVQDMDESAKRIYKVALGTPD-DHLVILLAHNGPSGLGSE 203 (349)
Q Consensus 153 ~~----~~--~~~~~-------------------~~---~~~~~~~~~~~~l~~~l~~~~~-~~~~Ilv~H~PP~~~g~~ 203 (349)
.. +. ..... .+ +...-..++++|+.+.+..... .+++|+++|+||+.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~~~~~~iv~~H~p~~~~~~~ 237 (322)
T 2nxf_A 158 EEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERVLIFSHLPVHPCAAD 237 (322)
T ss_dssp CTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHHTCEEEEEESSCCCTTSSC
T ss_pred CCCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHhcCCcEEEEEccCCCCCCCC
Confidence 00 00 00000 00 0011113556777776665432 457899999999765321
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCC-CccEEEeCccCCCcccCCcceEEEEEcCCceEEEeecccceeecc
Q 018902 204 PNDICGKDWGFGGGDHGDPDLAQAISLLKETTKL-CIPLVVFGHMHKELAYGNGLRKMIVVGADSTIYLNGAIVPRVKRL 282 (349)
Q Consensus 204 ~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~-~~~lvl~GH~H~~~~~~~g~~~~~~~~~~gt~yvn~g~~pr~~~~ 282 (349)
. ....++. +.+..+++ ++ +++++++||+|.... ..+.+|+.|++.+++-.
T Consensus 238 ~----------~~~~~~~----~~~~~ll~--~~~~v~~~~~GH~H~~~~---------~~~~~g~~~i~~~~~~~---- 288 (322)
T 2nxf_A 238 P----------ICLAWNH----EAVLSVLR--SHQSVLCFIAGHDHDGGR---------CTDSSGAQHITLEGVIE---- 288 (322)
T ss_dssp G----------GGSCTTH----HHHHHHHH--TCTTEEEEEECSCTTCEE---------EECTTSCEEEECCCGGG----
T ss_pred c----------cccccCH----HHHHHHHh--cCCCeEEEEcCCcCCCCc---------eeccCCceEEEecchhh----
Confidence 1 0001122 45666776 44 699999999999832 11225777887776511
Q ss_pred CCccCCCCCcccccccccCCCCCCceeeEEEEEEeCCeEeEEE
Q 018902 283 IDEQGADSSSVSNKTSFLRPDSKGTVRAFTVVEILDGRIDKIA 325 (349)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~v~i~~~~v~~~~ 325 (349)
. .....+|.+|++++++++...
T Consensus 289 ~---------------------~~~~~~y~~v~~~~~~~~~~~ 310 (322)
T 2nxf_A 289 T---------------------PPHSHAFATAYLYEDRMVMKG 310 (322)
T ss_dssp C---------------------CTTSCEEEEEEECSSEEEEEE
T ss_pred C---------------------CCCCCcEEEEEEECCeEEEEe
Confidence 0 024478999999999887753
|
| >1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A | Back alignment and structure |
|---|
Probab=99.85 E-value=3.4e-20 Score=160.86 Aligned_cols=164 Identities=18% Similarity=0.238 Sum_probs=106.9
Q ss_pred CCccEEEEEeCCCCCcC----hHHHHHHhhCCCCCEEEEcCCCCCCcHHHHHHHHcCCCCEEEEcCCCCCCccccccccc
Q 018902 36 ASVVRIVIVGDVHDDWD----LQEDSKALQLLKPDLVLFTGDFGNENVEIVQSVAELEFPKAVILGNHDSWKTQEFSGKK 111 (349)
Q Consensus 36 ~~~mril~iSDlH~~~~----~~~~~~~i~~~~pD~vI~~GDl~~~~~~~l~~l~~l~~Pi~~V~GNHD~~~~~~~~~~~ 111 (349)
.++|||+++||+|++.. .+.+.+.++..++|+||++||+++ .+.++.|.++..|+++|+||||....
T Consensus 8 ~~mm~i~~iSD~H~~~~~~~~~~~l~~~~~~~~~d~ii~~GDl~~--~~~~~~l~~~~~~~~~v~GNhD~~~~------- 78 (192)
T 1z2w_A 8 RDRMLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCT--KESYDYLKTLAGDVHIVRGDFDENLN------- 78 (192)
T ss_dssp ---CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBS--HHHHHHHHHHCSEEEECCCTTCCCTT-------
T ss_pred ccceEEEEEecCCCCccchhHHHHHHHHhccCCCCEEEEcCCCCC--HHHHHHHHhcCCCEEEEcCCcCcccc-------
Confidence 34589999999998642 244444445568999999999997 56677777767789999999997530
Q ss_pred hhHHHHHHHHhCCcceeeEEeecCCceEEEeCCeeeecCCchhhhhhhhhhccCCcchHHHHHHHHHHHhCCCCCCeEEE
Q 018902 112 KDGVQLQLECLGEEHVAYRRLDFPTLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMDESAKRIYKVALGTPDDHLVIL 191 (349)
Q Consensus 112 ~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~Il 191 (349)
+ +.... +.. +..+|+
T Consensus 79 ----------l------------p~~~~-------~~~------------------------------------~~~~i~ 93 (192)
T 1z2w_A 79 ----------Y------------PEQKV-------VTV------------------------------------GQFKIG 93 (192)
T ss_dssp ----------S------------CSEEE-------EEE------------------------------------TTEEEE
T ss_pred ----------C------------CcceE-------EEE------------------------------------CCEEEE
Confidence 0 00000 000 134799
Q ss_pred EeccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCccEEEeCccCCCcccCCcceEEEEEcCCceEEE
Q 018902 192 LAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKELAYGNGLRKMIVVGADSTIYL 271 (349)
Q Consensus 192 v~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~~~~~g~~~~~~~~~~gt~yv 271 (349)
++|.+|+.. | .+ + +.+..++++ .+++++++||+|.+. ..+. +++.++
T Consensus 94 l~Hg~~~~~-----------~------~~-~---~~l~~~~~~--~~~d~vi~GHtH~~~-----~~~~-----~~~~~i 140 (192)
T 1z2w_A 94 LIHGHQVIP-----------W------GD-M---ASLALLQRQ--FDVDILISGHTHKFE-----AFEH-----ENKFYI 140 (192)
T ss_dssp EECSCCCCB-----------T------TC-H---HHHHHHHHH--HSSSEEECCSSCCCE-----EEEE-----TTEEEE
T ss_pred EECCCcCCC-----------C------CC-H---HHHHHHHHh--cCCCEEEECCcCcCc-----cEeE-----CCEEEE
Confidence 999876432 0 01 1 334445442 369999999999982 2233 689999
Q ss_pred eeccc--ceeeccCCccCCCCCcccccccccCCCCCCceeeEEEEEEeCCeEeEEEEEe
Q 018902 272 NGAIV--PRVKRLIDEQGADSSSVSNKTSFLRPDSKGTVRAFTVVEILDGRIDKIAERW 328 (349)
Q Consensus 272 n~g~~--pr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~v~i~~~~v~~~~~~~ 328 (349)
|+|++ ||..++ +....+|+++++++++++.+...+
T Consensus 141 npGS~~~~~~~~~----------------------~~~~~~y~il~~~~~~~~~~~~~~ 177 (192)
T 1z2w_A 141 NPGSATGAYNALE----------------------TNIIPSFVLMDIQASTVVTYVYQL 177 (192)
T ss_dssp ECCCTTCCCCSSC----------------------SCCCCEEEEEEEETTEEEEEEEEE
T ss_pred ECCcccccCCCCC----------------------cCCCCcEEEEEEECCEEEEEEEEc
Confidence 99986 221101 133579999999999887765444
|
| >2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.84 E-value=8.9e-20 Score=161.13 Aligned_cols=173 Identities=17% Similarity=0.196 Sum_probs=110.0
Q ss_pred ccEEEEEeCCCCCcCh----HHHHHHhhCCCCCEEEEcCCCCCCcHHHHHHHHcCCCCEEEEcCCCCCCccccccccchh
Q 018902 38 VVRIVIVGDVHDDWDL----QEDSKALQLLKPDLVLFTGDFGNENVEIVQSVAELEFPKAVILGNHDSWKTQEFSGKKKD 113 (349)
Q Consensus 38 ~mril~iSDlH~~~~~----~~~~~~i~~~~pD~vI~~GDl~~~~~~~l~~l~~l~~Pi~~V~GNHD~~~~~~~~~~~~~ 113 (349)
+|||+++||+|++... +.+.+.++..++|+||++||+++ .+.++.|.++..|+++|+||||...... ..
T Consensus 25 ~m~i~~iSD~H~~~~~~~l~~~l~~~~~~~~~D~vi~~GDl~~--~~~l~~l~~~~~~v~~V~GNHD~~~~~~-~~---- 97 (215)
T 2a22_A 25 GDLVLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVCS--QEYVEMLKNITKNVYIVSGDLDSAIFNP-DP---- 97 (215)
T ss_dssp CEEEEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCCC--HHHHHHHHHHCSCEEECCCTTCCSCCBC-CG----
T ss_pred CcEEEEEecCCCCCChHHHHHHHHHHHhcCCCCEEEECCCCCC--HHHHHHHHHcCCCEEEecCCCcCccccc-Ch----
Confidence 4899999999987532 33444445678999999999997 5677777777789999999999764320 00
Q ss_pred HHHHHHHHhCCcceeeEEeecCCceEEEeCCeeeecCCchhhhhhhhhhccCCcchHHHHHHHHHHHhCCCCCCeEEEEe
Q 018902 114 GVQLQLECLGEEHVAYRRLDFPTLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMDESAKRIYKVALGTPDDHLVILLA 193 (349)
Q Consensus 114 ~~~~~l~~~~~~~~~~~~l~~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~Ilv~ 193 (349)
.+ +. ..+.. .. +. .+..+|+++
T Consensus 98 ---~~---~~---------~lp~~-~~------~~------------------------------------~~~~~i~l~ 119 (215)
T 2a22_A 98 ---ES---NG---------VFPEY-VV------VQ------------------------------------IGEFKIGLM 119 (215)
T ss_dssp ---GG---TB---------CCCSE-EE------EE------------------------------------ETTEEEEEE
T ss_pred ---hh---Hh---------hCCce-EE------Ee------------------------------------cCCeEEEEE
Confidence 00 00 00000 00 00 023589999
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCccEEEeCccCCCcccCCcceEEEEEcCCceEEEee
Q 018902 194 HNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKELAYGNGLRKMIVVGADSTIYLNG 273 (349)
Q Consensus 194 H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~~~~~g~~~~~~~~~~gt~yvn~ 273 (349)
|.+|+... .+ + +.+..++++ .+++++++||+|.+. ..+. +++.++|+
T Consensus 120 Hg~~~~~~-----------------~~-~---~~l~~~~~~--~~~d~vl~GHtH~~~-----~~~~-----~~~~~inp 166 (215)
T 2a22_A 120 HGNQVLPW-----------------DD-P---GSLEQWQRR--LDCDILVTGHTHKLR-----VFEK-----NGKLFLNP 166 (215)
T ss_dssp CSTTSSST-----------------TC-H---HHHHHHHHH--HTCSEEEECSSCCCE-----EEEE-----TTEEEEEC
T ss_pred cCCccCCC-----------------CC-H---HHHHHHHhh--cCCCEEEECCcCCCc-----cEee-----CCEEEEEC
Confidence 98764320 11 1 334445442 369999999999982 2233 68999999
Q ss_pred cccceeeccCCccCCCCCcccccccccCCCCCCceeeEEEEEEeCCeEeEEEEEe
Q 018902 274 AIVPRVKRLIDEQGADSSSVSNKTSFLRPDSKGTVRAFTVVEILDGRIDKIAERW 328 (349)
Q Consensus 274 g~~pr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~v~i~~~~v~~~~~~~ 328 (349)
|++-...... .+....+|+++++++++++.+...+
T Consensus 167 GS~~~~~~~~--------------------~~~~~~~y~il~i~~~~i~~~~~~~ 201 (215)
T 2a22_A 167 GTATGAFSAL--------------------TPDAPPSFMLMALQGNKVVLYVYDL 201 (215)
T ss_dssp CCSSCCCCTT--------------------STTCCCEEEEEEEETTEEEEEEEEE
T ss_pred CcccccCCCC--------------------CCCCCCcEEEEEEeCCcEEEEEEEe
Confidence 9862211000 0133579999999999887766555
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=5.3e-19 Score=163.38 Aligned_cols=247 Identities=14% Similarity=0.121 Sum_probs=128.8
Q ss_pred CCccEEEEEeCCCCCcC-------h----HHHHHHhhCCCCCEEEEcCCCCCC-------cHHHHHHHHc------C-CC
Q 018902 36 ASVVRIVIVGDVHDDWD-------L----QEDSKALQLLKPDLVLFTGDFGNE-------NVEIVQSVAE------L-EF 90 (349)
Q Consensus 36 ~~~mril~iSDlH~~~~-------~----~~~~~~i~~~~pD~vI~~GDl~~~-------~~~~l~~l~~------l-~~ 90 (349)
.++|||+++||+|.+.. . +.+.+.++..+||+||++||++.. ..++.+.+.. + ++
T Consensus 4 ~~~~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~ 83 (313)
T 1ute_A 4 TPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNV 83 (313)
T ss_dssp CCCEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTTC
T ss_pred CCceEEEEEcccCCCCCccccCchHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcchHHHHHHHHHHcCchhhcCC
Confidence 46799999999999752 1 222333456799999999998421 2244444432 4 68
Q ss_pred CEEEEcCCCCCCccccccccchhHHHHHHH--H------hCCcceeeEE-eec--CCceEEEeCCeeeecCCchhhhhhh
Q 018902 91 PKAVILGNHDSWKTQEFSGKKKDGVQLQLE--C------LGEEHVAYRR-LDF--PTLKLSIVGGRPFSCGGQQIFRKRL 159 (349)
Q Consensus 91 Pi~~V~GNHD~~~~~~~~~~~~~~~~~~l~--~------~~~~~~~~~~-l~~--~~~~i~~~g~~~~~~~g~~~~~~~~ 159 (349)
|+++|+||||..... ...+. . ....++.+.. +.. ..+.+.++++..+... ...+....
T Consensus 84 p~~~v~GNHD~~~~~----------~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~i~lds~~~~~~-~~~~~~~~ 152 (313)
T 1ute_A 84 PWHVLAGNHDHLGNV----------SAQIAYSKISKRWNFPSPYYRLRFKIPRSNVSVAIFMLDTVTLCGN-SDDFVSQQ 152 (313)
T ss_dssp CEEECCCHHHHHSCH----------HHHHHGGGTSTTEECCSSSEEEEEECTTSSCEEEEEECCHHHHHCC-GGGSTTCS
T ss_pred CEEEECCCCccCCCc----------cccccccccCCCccCcccceEEEEecCCCCceEEEEEEEChHHhCc-Cccccccc
Confidence 999999999975321 11110 0 0111111111 000 1333443433211100 00000000
Q ss_pred hhhccCCcchHHHHHHHHHHHhCCCCCCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCc
Q 018902 160 LSVRYGVQDMDESAKRIYKVALGTPDDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCI 239 (349)
Q Consensus 160 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~ 239 (349)
........-..++++|+.+.+...+ .+++|+++|+||+..+.. .....+.+.+..+++ ++++
T Consensus 153 ~~~~~~~~~~~~q~~wL~~~L~~~~-~~~~iv~~H~p~~~~~~~---------------~~~~~~~~~l~~~l~--~~~v 214 (313)
T 1ute_A 153 PERPRNLALARTQLAWIKKQLAAAK-EDYVLVAGHYPVWSIAEH---------------GPTHCLVKQLLPLLT--THKV 214 (313)
T ss_dssp CCSCSCHHHHHHHHHHHHHHHHHCC-CSEEEEECSSCSSCCSSS---------------CCCHHHHHHTHHHHH--HTTC
T ss_pred cCCccccchHHHHHHHHHHHHHhCC-CCeEEEEECCCCccCCCC---------------CCcHHHHHHHHHHHH--HcCC
Confidence 0000001112456788888877665 478999999998765211 012345567777777 4579
Q ss_pred cEEEeCccCCCcccCCcceEEEEEcCCceEEEeecccceeeccCCccCCCCCccc-ccccccCCCCCCceeeEEEEEEeC
Q 018902 240 PLVVFGHMHKELAYGNGLRKMIVVGADSTIYLNGAIVPRVKRLIDEQGADSSSVS-NKTSFLRPDSKGTVRAFTVVEILD 318 (349)
Q Consensus 240 ~lvl~GH~H~~~~~~~g~~~~~~~~~~gt~yvn~g~~pr~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~f~~v~i~~ 318 (349)
+++++||+|.... ....+|+.|+++|+.......... ...+. +..+|.. .......+|++|++++
T Consensus 215 ~~~l~GH~H~~~~---------~~~~~g~~~i~~gs~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~gy~~l~v~~ 280 (313)
T 1ute_A 215 TAYLCGHDHNLQY---------LQDENGLGFVLSGAGNFMDPSKKH----LRKVPNGYLRFHF-GAENSLGGFAYVEITP 280 (313)
T ss_dssp SEEEECSSSSEEE---------EECTTCCEEEEECBSSCCCCCCTT----GGGSCTTCEEEEE-CCTTSCCEEEEEEECS
T ss_pred cEEEECChhhhhh---------ccCCCCceEEEECCCcCcCccccc----cccCCCcccceec-cCcCCCCceEEEEEEc
Confidence 9999999998621 112267889999875321100000 00000 0011100 0012347999999998
Q ss_pred CeEeEEE
Q 018902 319 GRIDKIA 325 (349)
Q Consensus 319 ~~v~~~~ 325 (349)
++++++-
T Consensus 281 ~~~~~~~ 287 (313)
T 1ute_A 281 KEMSVTY 287 (313)
T ss_dssp SCEEEEE
T ss_pred CEEEEEE
Confidence 8876643
|
| >1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A | Back alignment and structure |
|---|
Probab=99.82 E-value=4.4e-19 Score=153.66 Aligned_cols=64 Identities=20% Similarity=0.287 Sum_probs=52.8
Q ss_pred ccEEEEEeCCCCCcCh-HHHHHHhhCCCCCEEEEcCCCCCCcHHHHHHHHcCCCCEEEEcCCCCCCc
Q 018902 38 VVRIVIVGDVHDDWDL-QEDSKALQLLKPDLVLFTGDFGNENVEIVQSVAELEFPKAVILGNHDSWK 103 (349)
Q Consensus 38 ~mril~iSDlH~~~~~-~~~~~~i~~~~pD~vI~~GDl~~~~~~~l~~l~~l~~Pi~~V~GNHD~~~ 103 (349)
+|||+++||+|++... +++++.++..++|+||++||+++. +.++.|.+++.|+++|+||||...
T Consensus 25 ~m~i~~iSD~Hg~~~~l~~~l~~~~~~~~D~ii~~GDl~~~--~~~~~l~~l~~~~~~V~GNhD~~~ 89 (190)
T 1s3l_A 25 HMKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSL--FVIKEFENLNANIIATYGNNDGER 89 (190)
T ss_dssp -CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCST--HHHHHGGGCSSEEEEECCTTCCCH
T ss_pred CeEEEEEeeCCCCHHHHHHHHHHHhhcCCCEEEECCCCCCH--HHHHHHHhcCCCEEEEeCCCcchH
Confidence 4899999999976543 556677777899999999999975 678888877789999999999753
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.82 E-value=4.6e-19 Score=172.87 Aligned_cols=238 Identities=11% Similarity=0.031 Sum_probs=126.7
Q ss_pred CCCccEEEEEeCCCCCcC---------------------------hHHHHHHhhCCCCCEEEEcCCCCCCc-----H---
Q 018902 35 SASVVRIVIVGDVHDDWD---------------------------LQEDSKALQLLKPDLVLFTGDFGNEN-----V--- 79 (349)
Q Consensus 35 ~~~~mril~iSDlH~~~~---------------------------~~~~~~~i~~~~pD~vI~~GDl~~~~-----~--- 79 (349)
..++|||+++||+|++.. .+++++.++..+||+||++||+++.. .
T Consensus 36 ~~~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~ 115 (443)
T 2xmo_A 36 KDRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNNGEKTSHEELA 115 (443)
T ss_dssp SCCCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBSSCCHHHHHHHH
T ss_pred CCCCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHH
Confidence 356799999999998632 13455566667899999999999742 2
Q ss_pred HHHHHHHcCCCCEEEEcCCCCCCccccc--cc--------cchhHHHHHHHHhCC--------cceeeEEeecCCceEEE
Q 018902 80 EIVQSVAELEFPKAVILGNHDSWKTQEF--SG--------KKKDGVQLQLECLGE--------EHVAYRRLDFPTLKLSI 141 (349)
Q Consensus 80 ~~l~~l~~l~~Pi~~V~GNHD~~~~~~~--~~--------~~~~~~~~~l~~~~~--------~~~~~~~l~~~~~~i~~ 141 (349)
+.++.+...++|+++|+||||....... .. .....+...+...+. ....|.....+++.+.+
T Consensus 116 ~~l~~l~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~i~ 195 (443)
T 2xmo_A 116 KKLTQVEKNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLLM 195 (443)
T ss_dssp HHHHHHHHTTCEEEEECCTTTSSCTTCEEEETTEEEECCCCCHHHHHHHTCCCCCTTCSEECSSSSCEEECSBSSEEEEE
T ss_pred HHHHHHHhCCCeEEEECCcCCCCCccccccCCcccccccccCHHHHHHHhhhcChhhhhccCCCCceEEEecCCCEEEEE
Confidence 2344444448899999999998643110 00 011223332221110 01123333345556665
Q ss_pred eCCeeeecCCchhhhhhhhhhccCCcchHHHHHHHHHHHhCCC-CCCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018902 142 VGGRPFSCGGQQIFRKRLLSVRYGVQDMDESAKRIYKVALGTP-DDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHG 220 (349)
Q Consensus 142 ~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G 220 (349)
+++..+... .+..........+ .++++|+.+.+.... .+.++|+++|+||...+.. |.......+
T Consensus 196 Lds~~~~~~--~~~~~~~~~g~~~----~~ql~wL~~~L~~~~~~~~~~Iv~~H~p~~~~~~~--------~~~~~~~~~ 261 (443)
T 2xmo_A 196 LDTAIYKTN--MQQGNPTTEGGLT----AGTLDWIKESSALAKKNGAKLIPVLHHNLTDHNDV--------IQKGYTINY 261 (443)
T ss_dssp CCCBCCTTH--HHHTSCCCCBCCC----HHHHHHHHHHHHHHHHTTCEEEEECSSBSSCSSCC----------CCSBCTT
T ss_pred eeCCCcCcc--cccCCCCcCCccC----HHHHHHHHHHHHHHHHcCCeEEEEECCCCcccccc--------ccccccccc
Confidence 555321100 0000000001122 234566665555433 2457899999998754221 111000011
Q ss_pred CHHHHHHHHHHHHhcCCCccEEEeCccCCCcccCCcceEEEEEcCCceEEEeecccceeeccCCccCCCCCccccccccc
Q 018902 221 DPDLAQAISLLKETTKLCIPLVVFGHMHKELAYGNGLRKMIVVGADSTIYLNGAIVPRVKRLIDEQGADSSSVSNKTSFL 300 (349)
Q Consensus 221 ~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~~~~~g~~~~~~~~~~gt~yvn~g~~pr~~~~~~~~~~~~~~~~~~~~~~ 300 (349)
.+.+.++++ +++++++++||+|..... ..-..++.+...+++|++-
T Consensus 262 ----~~~l~~ll~--~~~v~lvl~GH~H~~~~~-----~~~~~~g~~~~~i~~gs~~----------------------- 307 (443)
T 2xmo_A 262 ----NQQVIDALT--EGAMDFSLSGHIHTQNIR-----SAKSTDGKEITDIVTNALS----------------------- 307 (443)
T ss_dssp ----HHHHHHHHH--HTTCCEEEECSSCSCEEE-----EEECTTSCEEEEEECCCTT-----------------------
T ss_pred ----HHHHHHHHH--HcCCeEEEECCcccCchh-----hcccCCCCceEEEEcCccc-----------------------
Confidence 245556666 347999999999998321 1100111135667777631
Q ss_pred CCCCCCceeeEEEEEEeCCe--EeEEE
Q 018902 301 RPDSKGTVRAFTVVEILDGR--IDKIA 325 (349)
Q Consensus 301 ~~~~~~~~~~f~~v~i~~~~--v~~~~ 325 (349)
..+.+|.++++++++ ++.+.
T Consensus 308 -----~~p~~y~il~i~~~~~~~~~~~ 329 (443)
T 2xmo_A 308 -----VFPHKYGNITYSAKNKNFTYQS 329 (443)
T ss_dssp -----STTCEEEEEEEETTTTEEEEEE
T ss_pred -----cCCCCeEEEEEeCCCceEEEEE
Confidence 133689999998876 44433
|
| >3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=2.5e-19 Score=171.96 Aligned_cols=69 Identities=25% Similarity=0.366 Sum_probs=52.6
Q ss_pred CCccEEEEEeCCCCCcC--------------hHHHHHHhhCCCCCEEEEcCCCCCCc----------HHHHHHHHcCCCC
Q 018902 36 ASVVRIVIVGDVHDDWD--------------LQEDSKALQLLKPDLVLFTGDFGNEN----------VEIVQSVAELEFP 91 (349)
Q Consensus 36 ~~~mril~iSDlH~~~~--------------~~~~~~~i~~~~pD~vI~~GDl~~~~----------~~~l~~l~~l~~P 91 (349)
.++|||+|+||+|++.. .+++++.++..+||+||++||+++.. .+.++.|...++|
T Consensus 18 ~~~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~~~~p 97 (386)
T 3av0_A 18 GSHMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLHENNIK 97 (386)
T ss_dssp CCCCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHHTTCE
T ss_pred CCCeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHhcCCc
Confidence 45699999999999852 24566777788999999999999753 1234444444789
Q ss_pred EEEEcCCCCCCcc
Q 018902 92 KAVILGNHDSWKT 104 (349)
Q Consensus 92 i~~V~GNHD~~~~ 104 (349)
+++|+||||....
T Consensus 98 v~~v~GNHD~~~~ 110 (386)
T 3av0_A 98 VYIVAGNHEMPRR 110 (386)
T ss_dssp EEECCCGGGSCSS
T ss_pred EEEEcCCCCCCcc
Confidence 9999999998653
|
| >2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A | Back alignment and structure |
|---|
Probab=99.80 E-value=3e-19 Score=168.14 Aligned_cols=226 Identities=15% Similarity=0.095 Sum_probs=112.4
Q ss_pred CCCccEEEEEeCCCCC----cC-------------hHHHHHHhhCCCCCEEEEcCC-CCCCc---H----HHHHHHHcCC
Q 018902 35 SASVVRIVIVGDVHDD----WD-------------LQEDSKALQLLKPDLVLFTGD-FGNEN---V----EIVQSVAELE 89 (349)
Q Consensus 35 ~~~~mril~iSDlH~~----~~-------------~~~~~~~i~~~~pD~vI~~GD-l~~~~---~----~~l~~l~~l~ 89 (349)
..++|||+|+||+|++ .. .+++++.+++.+||+||++|| ++|.. . .+.+.|.++.
T Consensus 15 ~~~~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~~~~~~~~~~~~~~~l~~L~ 94 (336)
T 2q8u_A 15 NLKELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMM 94 (336)
T ss_dssp TCCEEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCSEEEEESCSBSCSSCCCHHHHHHHHHHHHHHH
T ss_pred ecCceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCCEEEECCccccCCCCCCHHHHHHHHHHHHHHH
Confidence 3567999999999977 21 145666777789999999999 98742 1 2344444443
Q ss_pred --CCEEEEcCCCCCCccccccccchhHHHHHHHHhCCcceeeEEeecCCceE-EEeCCeeeecCCchhhhhhhhhhccCC
Q 018902 90 --FPKAVILGNHDSWKTQEFSGKKKDGVQLQLECLGEEHVAYRRLDFPTLKL-SIVGGRPFSCGGQQIFRKRLLSVRYGV 166 (349)
Q Consensus 90 --~Pi~~V~GNHD~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i-~~~g~~~~~~~g~~~~~~~~~~~~~~~ 166 (349)
+|+++|+||||... . ..+...+...+.. +..+....... ..+.+..+.+.|.++.......... .
T Consensus 95 ~~~pv~~i~GNHD~~~-~-------~~~~~~l~~~g~n---v~v~~~~~~~~~~~~~~~~v~i~glp~~~~~~~~~~~-~ 162 (336)
T 2q8u_A 95 RTAPVVVLPGNHDWKG-L-------KLFGNFVTSISSD---ITFVMSFEPVDVEAKRGQKVRILPFPYPDESEALRKN-E 162 (336)
T ss_dssp HHSCEEECCC-------C-------HHHHHHHHHHCSS---EEECCSSSCEEEECTTSCEEEEEEECCC-------CC-S
T ss_pred hcCCEEEECCCCCccc-c-------ccHHHHHHhcCCE---EEEEecccccCceEEeCCCEEEEECCCCCHHHHHHHh-h
Confidence 89999999999864 1 1233444443310 11111111000 0000111222222111110000001 1
Q ss_pred cchHHHHHHHHHHHhCC--CCCCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCccEEEe
Q 018902 167 QDMDESAKRIYKVALGT--PDDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVF 244 (349)
Q Consensus 167 ~~~~~~~~~l~~~l~~~--~~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lvl~ 244 (349)
....+...++.+.+... +++.++|+++|+|+.+..... ..... +. ..+...+. +.++|++++
T Consensus 163 ~~~~~~~~~~~~~l~~~~~~~~~~~Ill~H~~~~~~~~~~-----~~~~~----~~-----~~v~~~l~--~~~~d~v~~ 226 (336)
T 2q8u_A 163 GDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGYA-----GIEQG----RE-----IIINRALI--PSVVDYAAL 226 (336)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCSSEEEEEEESEETTCC-----------------CC-----CEECGGGS--CTTSSEEEE
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCEEEEECccccCCCCCC-----Cccch----hh-----cccCHHHc--cccCCEEEE
Confidence 22223344444444321 346789999999886531100 00000 00 00100111 347999999
Q ss_pred CccCCCcccCCcceEEEEEcCCceEEEeecccceeeccCCccCCCCCcccccccccCCCCCCceeeEEEEEEeCCe
Q 018902 245 GHMHKELAYGNGLRKMIVVGADSTIYLNGAIVPRVKRLIDEQGADSSSVSNKTSFLRPDSKGTVRAFTVVEILDGR 320 (349)
Q Consensus 245 GH~H~~~~~~~g~~~~~~~~~~gt~yvn~g~~pr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~v~i~~~~ 320 (349)
||+|.++. +. +++.++|+|+..+..+.+. +..++|.+|++++++
T Consensus 227 GH~H~~~~--------~~---~~~~i~y~GS~~~~s~~e~---------------------~~~~~~~lv~i~~~~ 270 (336)
T 2q8u_A 227 GHIHSFRE--------IQ---KQPLTIYPGSLIRIDFGEE---------------------ADEKGAVFVELKRGE 270 (336)
T ss_dssp ESCSSCEE--------EE---ETTEEEECCCSSCCSGGGT---------------------TCCCEEEEEEEETTS
T ss_pred ccccCceE--------eC---CCccEEECCCCcCCCcccc---------------------CCCCEEEEEEEeCCC
Confidence 99999832 11 2356789998755544442 335899999999764
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=99.78 E-value=8.9e-19 Score=164.83 Aligned_cols=234 Identities=12% Similarity=0.062 Sum_probs=130.2
Q ss_pred CccEEEEEeCCCCCcCh-----HHHHHHhhCCCCCEEEEcCCCCCCc------HHHHH---HH-----HcCCCCEEEEcC
Q 018902 37 SVVRIVIVGDVHDDWDL-----QEDSKALQLLKPDLVLFTGDFGNEN------VEIVQ---SV-----AELEFPKAVILG 97 (349)
Q Consensus 37 ~~mril~iSDlH~~~~~-----~~~~~~i~~~~pD~vI~~GDl~~~~------~~~l~---~l-----~~l~~Pi~~V~G 97 (349)
..+||+++||+|.+... +.+.+.++..+||+||++||+++.. .++.+ .+ ..+++|+++|+|
T Consensus 2 ~~l~f~~igD~g~g~~~q~~va~~m~~~~~~~~pd~vl~~GD~~y~G~~~~~d~~~~~~f~~~~~~~~~~~~~P~~~vlG 81 (342)
T 3tgh_A 2 CQLRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFIDGVKGLNDPAWKNLYEDVYSEEKGDMYMPFFTVLG 81 (342)
T ss_dssp CCEEEEECCSCBSCCHHHHHHHHHHHHHHHHTTCCEEEECSCSBTTCCCSTTCTHHHHHTTTTSCCGGGTTCSEEEECCC
T ss_pred ceEEEEEEecCCCCCchHHHHHHHHHHHHhhcCCCEEEECCCcccCCCCcCccHHHHHHHHHHhhhhhhhhCCCEEEeCC
Confidence 35899999999987653 3344555678999999999988532 12222 22 234789999999
Q ss_pred CCCCCccccccccchhHHHH----------HHH----HhCC-------cceeeE-EeecC-------------CceEEEe
Q 018902 98 NHDSWKTQEFSGKKKDGVQL----------QLE----CLGE-------EHVAYR-RLDFP-------------TLKLSIV 142 (349)
Q Consensus 98 NHD~~~~~~~~~~~~~~~~~----------~l~----~~~~-------~~~~~~-~l~~~-------------~~~i~~~ 142 (349)
|||+...... ...+.. .++ .... .++.+. .+..+ .+.+.++
T Consensus 82 NHD~~~~~~a----q~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~~yY~~~~~f~~~~~~~~~~~g~~~~~v~fi~L 157 (342)
T 3tgh_A 82 TRDWTGNYNA----QLLKGQGIYIEKNGETSIEKDADATNYPKWIMPNYWYHYFTHFTVSSGPSIVKTGHKDLAAAFIFI 157 (342)
T ss_dssp HHHHTSCHHH----HHHHHHC---------------CCCSSCEEECSSSSEEEEEEEEEC---------CEEEEEEEEEC
T ss_pred CCccCCCchH----hhhhhhcccccccccccccccccccCCCCccCCcceEEEEEEeeccccccccccCCCCceEEEEEE
Confidence 9998754210 000000 000 0011 111110 00100 1233333
Q ss_pred CCeeeecCCchhhhhhhhhhccCCcchHHHHHHHHHHHhCCCCCCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q 018902 143 GGRPFSCGGQQIFRKRLLSVRYGVQDMDESAKRIYKVALGTPDDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDP 222 (349)
Q Consensus 143 g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~ 222 (349)
++..+.. ...+ .........++++||.+.|.. .+++||++|+|++..+.. ....
T Consensus 158 DT~~l~~-~~~~-------~~~~~~~~~~Ql~WLe~~L~~---~~~~IV~~HhP~~~~~~~---------------~~~~ 211 (342)
T 3tgh_A 158 DTWVLSS-NFPY-------KKIHEKAWNDLKSQLSVAKKI---ADFIIVVGDQPIYSSGYS---------------RGSS 211 (342)
T ss_dssp CTTTTST-TCSC-------HHHHHHHHHHHHHHHHHHHHH---CSEEEEECSSCSSCSSTT---------------CCCH
T ss_pred eCccccc-CCcc-------cccchHHHHHHHHHHHHhhcc---CCcEEEEECCCCCCCCCC---------------CCcH
Confidence 3321110 0000 000112345678888888843 468999999998765211 0135
Q ss_pred HHHHHHHHHHHhcCCCccEEEeCccCCCcccCCcceEEEEEcCCceEEEeecccceeeccCCccCCCCCcccccccccCC
Q 018902 223 DLAQAISLLKETTKLCIPLVVFGHMHKELAYGNGLRKMIVVGADSTIYLNGAIVPRVKRLIDEQGADSSSVSNKTSFLRP 302 (349)
Q Consensus 223 ~~~~al~~l~~~~~~~~~lvl~GH~H~~~~~~~g~~~~~~~~~~gt~yvn~g~~pr~~~~~~~~~~~~~~~~~~~~~~~~ 302 (349)
.+++.+..+++ +++++++++||+|.... ... +++.|+.+|+......... .-....+|
T Consensus 212 ~l~~~l~~ll~--~~~VdlvlsGH~H~~~~-----~~~-----~g~~~iv~Ga~g~~~~~~~-------~~~~~s~f--- 269 (342)
T 3tgh_A 212 YLAYYLLPLLK--DAEVDLYISGHDNNMEV-----IED-----NDMAHITCGSGSMSQGKSG-------MKNSKSLF--- 269 (342)
T ss_dssp HHHHHTHHHHH--HTTCCEEEECSSSSEEE-----EEE-----TTEEEEEECCSSCCCCCCS-------SCCTTEEE---
T ss_pred HHHHHHHHHHH--HcCCCEEEECCCcceeE-----Eee-----CCcEEEEeCccccccccCC-------CCCCccee---
Confidence 67788888988 55799999999999832 111 5688888877422111000 00000111
Q ss_pred CCCCceeeEEEEEEeCCeEeEE
Q 018902 303 DSKGTVRAFTVVEILDGRIDKI 324 (349)
Q Consensus 303 ~~~~~~~~f~~v~i~~~~v~~~ 324 (349)
..+..+|.++++++++++++
T Consensus 270 --~~~~~Gf~~l~v~~~~l~~~ 289 (342)
T 3tgh_A 270 --FSSDIGFCVHELSNNGIVTK 289 (342)
T ss_dssp --EECSSEEEEEEEETTEEEEE
T ss_pred --ecCCCcEEEEEEECCEEEEE
Confidence 13457999999998887653
|
| >4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=2.8e-17 Score=158.90 Aligned_cols=237 Identities=18% Similarity=0.156 Sum_probs=126.9
Q ss_pred CCCCCCCccEEEEEeCCCCCcCh-------------HHHHHHhhCCCCCEEEEcCCCCCCc-------HHHHHHHHc---
Q 018902 31 APAMSASVVRIVIVGDVHDDWDL-------------QEDSKALQLLKPDLVLFTGDFGNEN-------VEIVQSVAE--- 87 (349)
Q Consensus 31 ~~~~~~~~mril~iSDlH~~~~~-------------~~~~~~i~~~~pD~vI~~GDl~~~~-------~~~l~~l~~--- 87 (349)
+.+...++|||+|+||+|++... +++++.++..+||+||++|||+|.. ..+++.|.+
T Consensus 69 ~~~~~~~~mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~ps~~a~~~~~~~Lr~~~~ 148 (472)
T 4fbk_A 69 GSAGSENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCL 148 (472)
T ss_dssp ----CTTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHB
T ss_pred cCCCCCCCeEEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcc
Confidence 44455678999999999998531 4567778889999999999999852 123333322
Q ss_pred ---------------------------------CCCCEEEEcCCCCCCccccccccchhHHHHHHHHhCCcceeeEEeec
Q 018902 88 ---------------------------------LEFPKAVILGNHDSWKTQEFSGKKKDGVQLQLECLGEEHVAYRRLDF 134 (349)
Q Consensus 88 ---------------------------------l~~Pi~~V~GNHD~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~ 134 (349)
.++|||+|+||||......+ ......+...+..++-......
T Consensus 149 g~~~~~~e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~~~~~~-----~s~~~LL~~~g~v~l~g~~~~~ 223 (472)
T 4fbk_A 149 GDKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGDGR-----YSALDILQVTGLVNYFGRVPEN 223 (472)
T ss_dssp SSCCCCCEEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSCCC--C-----CCHHHHHHHTTSCEECCCCSCS
T ss_pred cCCcchheecchhhhhcccccccccccccccccCCCcEEEEecCCCCcccccc-----ccHHHHhccCCcEEEeCCcccC
Confidence 27899999999998644221 1133445444432110000000
Q ss_pred CC-----ceEEEeCCeeeecCCchhhhhhhhhhccCCcchHHHHHHHHHHHh--------C--CCCCCeEEEEeccCCCC
Q 018902 135 PT-----LKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMDESAKRIYKVAL--------G--TPDDHLVILLAHNGPSG 199 (349)
Q Consensus 135 ~~-----~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--------~--~~~~~~~Ilv~H~PP~~ 199 (349)
+. +.+. .|+....+.|..+... +++.+.+. . ...+.++|+++|....+
T Consensus 224 d~i~~~pv~l~-kg~~~valyGl~y~~d----------------~rl~r~~~e~~v~~~~p~~~~~~~~nIlvlH~~~~~ 286 (472)
T 4fbk_A 224 DNIVVSPILLQ-KGFTKLALYGISNVRD----------------ERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNHSA 286 (472)
T ss_dssp SSEEECCEEEE-ETTEEEEEEECCCCCH----------------HHHHHHHHTTCEEEEEESTTGGGEEEEEEEESCSCC
T ss_pred CceeEEEEEEE-eCCceEEEEecCCCch----------------hhhhhhhhhhhhhhhCcccccCCceEEEEecCCccC
Confidence 11 1111 2344444433321110 11111110 0 01346799999986433
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCccEEEeCccCCCcccCCcceEEEEEcCCceEEEeeccccee
Q 018902 200 LGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKELAYGNGLRKMIVVGADSTIYLNGAIVPRV 279 (349)
Q Consensus 200 ~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~~~~~g~~~~~~~~~~gt~yvn~g~~pr~ 279 (349)
.+. .++.+ ..++ ..++|+|++||+|.++... . .-..+++.++|||+....
T Consensus 287 ~~~-------~~yip--------------e~ll---~~g~DyValGH~H~~~~~~----~--~~~~~g~~ivyPGS~~~~ 336 (472)
T 4fbk_A 287 HTP-------TSYLP--------------ESFI---QDFYDFVLWGHEHECLIDG----S--YNPTQKFTVVQPGSTIAT 336 (472)
T ss_dssp SST-------TSSCC--------------GGGS---CTTCSEEEEESCCSCEEEE----E--EETTTTEEEEECCCSSCS
T ss_pred CCc-------cccCC--------------hhhh---hcCCCEEEecCcccceeee----c--ccCCCCeEEEECCCcccc
Confidence 211 01111 1122 3469999999999983210 0 001256889999996443
Q ss_pred eccCCccCCCCCcccccccccCCCCCCceeeEEEEEEeCCeEeEEEEEeeeecCCcceeEEEee
Q 018902 280 KRLIDEQGADSSSVSNKTSFLRPDSKGTVRAFTVVEILDGRIDKIAERWIIVVGDTTTLQEEHI 343 (349)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~v~i~~~~v~~~~~~~~~~~~~~~~~~~~~~ 343 (349)
...++ ....++|.+|+++++.++.+...+ .+.+++...++
T Consensus 337 s~~e~--------------------E~~~kg~~lveI~~~~v~ve~I~L----~t~Rpf~~~~i 376 (472)
T 4fbk_A 337 SLSPG--------------------ETAPKHCGILNITGKDFHLEKIRL----RTVRPFIMKDI 376 (472)
T ss_dssp SCCGG--------------------GCSCCEEEEEEEETTEEEEEEEEC----SSSCCEEEEEE
T ss_pred ccCcc--------------------CCCCCEEEEEEEECCEEEEEEEEC----CCcccEEEEEE
Confidence 32211 023689999999998876544332 13344555444
|
| >3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.3e-17 Score=160.76 Aligned_cols=220 Identities=17% Similarity=0.218 Sum_probs=122.1
Q ss_pred CCccEEEEEeCCCCCcCh-------------HHHHHHhhCCCCCEEEEcCCCCCCc----------HHHHHHHH------
Q 018902 36 ASVVRIVIVGDVHDDWDL-------------QEDSKALQLLKPDLVLFTGDFGNEN----------VEIVQSVA------ 86 (349)
Q Consensus 36 ~~~mril~iSDlH~~~~~-------------~~~~~~i~~~~pD~vI~~GDl~~~~----------~~~l~~l~------ 86 (349)
.++|||+|+||+|++... +++++.+++.+||+||++||+++.. .+.++.+.
T Consensus 30 ~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~~~D~VliaGDlfd~~~~~~~~~~~~~~~L~r~~~~~~~~ 109 (431)
T 3t1i_A 30 ENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKPSRKTLHTCLELLRKYCMGDRPV 109 (431)
T ss_dssp GGEEEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBCSSCC
T ss_pred CCCEEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHHhccCCcc
Confidence 567999999999997531 4567777789999999999999852 12333332
Q ss_pred ---------------------------cCCCCEEEEcCCCCCCccccccccchhHHHHHHHHhCCcc-eeeEEeecCCce
Q 018902 87 ---------------------------ELEFPKAVILGNHDSWKTQEFSGKKKDGVQLQLECLGEEH-VAYRRLDFPTLK 138 (349)
Q Consensus 87 ---------------------------~l~~Pi~~V~GNHD~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~l~~~~~~ 138 (349)
+..+|+|+|.||||........ .....+...+... ++- .-+.+.+.
T Consensus 110 ~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~~g~~~l-----~~~~lL~~~glv~~fg~-~~~~e~i~ 183 (431)
T 3t1i_A 110 QFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDPTGADAL-----CALDILSCAGFVNHFGR-SMSVEKID 183 (431)
T ss_dssp CCEECSCC------------------CCBCSCEEECCCSSSCCBTTTTB-----CHHHHHHHHTSEEECCC-CCCSSCEE
T ss_pred cceeccchhhccccccccccccccccccCCCcEEEEccCCCCccccccc-----CHHHHhccCCcEEEECC-cCccccee
Confidence 2368999999999986432111 1234555444321 110 00011111
Q ss_pred ---EEE-eCCeeeecCCchhhhhhhhhhccCCcchHHHHHHHHHHHhC-----C-----CCCCeEEEEeccCCCCCCCCC
Q 018902 139 ---LSI-VGGRPFSCGGQQIFRKRLLSVRYGVQDMDESAKRIYKVALG-----T-----PDDHLVILLAHNGPSGLGSEP 204 (349)
Q Consensus 139 ---i~~-~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----~-----~~~~~~Ilv~H~PP~~~g~~~ 204 (349)
+.+ .|+....+.|..+... +++.+.+.. . .++.++|+++|..-...+.
T Consensus 184 ~~Pv~l~~g~~~valyGl~~~~~----------------~~l~~~~~~~~v~~~~p~~~~~~~~~Ilv~H~~~~~~g~-- 245 (431)
T 3t1i_A 184 ISPVLLQKGSTKIALYGLGSIPD----------------ERLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRSKHGS-- 245 (431)
T ss_dssp ECCEEEEETTEEEEEEEECCCCH----------------HHHHHHHHTTCEEECCCSSCGGGEEEEEEECSCCSCSSS--
T ss_pred eEEEEEecCCEeEEEEeCCCCCH----------------HHHhhhhccccceeecccccCCCceEEEEECCCccCCCc--
Confidence 111 2444444444322111 111111111 0 1346899999985321110
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCccEEEeCccCCCcccCCcceEEEEEc-CCceEEEeecccceeeccC
Q 018902 205 NDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKELAYGNGLRKMIVVG-ADSTIYLNGAIVPRVKRLI 283 (349)
Q Consensus 205 ~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~~~~~g~~~~~~~~-~~gt~yvn~g~~pr~~~~~ 283 (349)
.++.. ..++ ..++|+|++||+|.++.. . ..+ .+++.++|||+..+....+
T Consensus 246 -----~~~ip--------------~~l~---~~~~Dyv~lGH~H~~~~~----~---~~~~~~~~~i~yPGS~~~~s~~e 296 (431)
T 3t1i_A 246 -----TNFIP--------------EQFL---DDFIDLVIWGHEHECKIA----P---TKNEQQLFYISQPGSSVVTSLSP 296 (431)
T ss_dssp -----SSSCC--------------GGGS---CTTCCEEEECSCCSCEEE----E---EECTTTCCEEEECCCSSCCSCCH
T ss_pred -----cccCC--------------HhHh---hCCCCEEEeccccccccc----c---cccCCCCEEEEeCCCCcccCcCc
Confidence 01111 1122 346999999999998321 0 111 1468899999976644332
Q ss_pred CccCCCCCcccccccccCCCCCCceeeEEEEEEeCCeEeEEEEEe
Q 018902 284 DEQGADSSSVSNKTSFLRPDSKGTVRAFTVVEILDGRIDKIAERW 328 (349)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~v~i~~~~v~~~~~~~ 328 (349)
.. ...++|.+|++++++++.+...+
T Consensus 297 ~E--------------------~~~k~~~lvei~~~~~~ve~i~l 321 (431)
T 3t1i_A 297 GE--------------------AVKKHVGLLRIKGRKMNMHKIPL 321 (431)
T ss_dssp HH--------------------HSCCEEEEEEEETTEEEEEEEEC
T ss_pred cc--------------------CCCCEEEEEEEECCEEEEEEEEC
Confidence 10 23579999999998776654333
|
| >3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.77 E-value=3.2e-18 Score=146.26 Aligned_cols=157 Identities=17% Similarity=0.146 Sum_probs=101.1
Q ss_pred CccEEEEEeCCCCCcCh-HHHHHHhhCCCCCEEEEcCCCCCCcHHHHHHHHcCCCCEEEEcCCCCCCccccccccchhHH
Q 018902 37 SVVRIVIVGDVHDDWDL-QEDSKALQLLKPDLVLFTGDFGNENVEIVQSVAELEFPKAVILGNHDSWKTQEFSGKKKDGV 115 (349)
Q Consensus 37 ~~mril~iSDlH~~~~~-~~~~~~i~~~~pD~vI~~GDl~~~~~~~l~~l~~l~~Pi~~V~GNHD~~~~~~~~~~~~~~~ 115 (349)
.+|||+++||+|++... +++++.++. ++|+|+++||+... .++.+. .|+++|+||||.... +
T Consensus 5 ~~m~i~~isD~H~~~~~~~~~~~~~~~-~~d~i~~~GD~~~~---~l~~l~---~~~~~v~GNhD~~~~--~-------- 67 (176)
T 3ck2_A 5 AKQTIIVMSDSHGDSLIVEEVRDRYVG-KVDAVFHNGDSELR---PDSPLW---EGIRVVKGNMDFYAG--Y-------- 67 (176)
T ss_dssp CCEEEEEECCCTTCHHHHHHHHHHHTT-TSSEEEECSCCCSC---TTCGGG---TTEEECCCTTCCSTT--C--------
T ss_pred cCcEEEEEecCCCCHHHHHHHHHHhhc-CCCEEEECCCCchH---HHHhhh---CCeEEecCcccchhc--C--------
Confidence 35899999999986543 456666655 89999999998432 223332 389999999996421 0
Q ss_pred HHHHHHhCCcceeeEEeecCCceEEEeCCeeeecCCchhhhhhhhhhccCCcchHHHHHHHHHHHhCCCCCCeEEEEecc
Q 018902 116 QLQLECLGEEHVAYRRLDFPTLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMDESAKRIYKVALGTPDDHLVILLAHN 195 (349)
Q Consensus 116 ~~~l~~~~~~~~~~~~l~~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~Ilv~H~ 195 (349)
+... . +.+ +..+|+++|+
T Consensus 68 -------------------p~~~-~------~~~------------------------------------~~~~i~~~Hg 85 (176)
T 3ck2_A 68 -------------------PERL-V------TEL------------------------------------GSTKIIQTHG 85 (176)
T ss_dssp -------------------CSEE-E------EEE------------------------------------TTEEEEEECS
T ss_pred -------------------CcEE-E------EEE------------------------------------CCeEEEEECC
Confidence 0000 0 110 1247999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCccEEEeCccCCCcccCCcceEEEEEcCCceEEEeecc
Q 018902 196 GPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKELAYGNGLRKMIVVGADSTIYLNGAI 275 (349)
Q Consensus 196 PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~~~~~g~~~~~~~~~~gt~yvn~g~ 275 (349)
+|+... .+. +.+.++++ +.+++++++||+|.+. ..+. +++.++|+|+
T Consensus 86 ~~~~~~-----------------~~~----~~l~~~~~--~~~~d~vi~GHtH~~~-----~~~~-----~~~~~inpGs 132 (176)
T 3ck2_A 86 HLFDIN-----------------FNF----QKLDYWAQ--EEEAAICLYGHLHVPS-----AWLE-----GKILFLNPGS 132 (176)
T ss_dssp GGGTTT-----------------TCS----HHHHHHHH--HTTCSEEECCSSCCEE-----EEEE-----TTEEEEEECC
T ss_pred CccCCC-----------------CCH----HHHHHHHH--hcCCCEEEECCcCCCC-----cEEE-----CCEEEEECCC
Confidence 885431 123 33444444 3469999999999982 2233 6899999998
Q ss_pred cceeeccCCccCCCCCcccccccccCCCCCCceeeEEEEEEeCCeEeEEEEEe
Q 018902 276 VPRVKRLIDEQGADSSSVSNKTSFLRPDSKGTVRAFTVVEILDGRIDKIAERW 328 (349)
Q Consensus 276 ~pr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~v~i~~~~v~~~~~~~ 328 (349)
+-..+ +. ....+|+++++++++++.+...+
T Consensus 133 ~~~~~-~~----------------------~~~~~y~il~~~~~~~~v~~~~~ 162 (176)
T 3ck2_A 133 ISQPR-GT----------------------IRECLYARVEIDDSYFKVDFLTR 162 (176)
T ss_dssp SSSCC-TT----------------------CCSCCEEEEEECSSEEEEEEECT
T ss_pred CCcCC-CC----------------------CCCCeEEEEEEcCCEEEEEEEEE
Confidence 63211 00 12268999999998876654443
|
| >3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C | Back alignment and structure |
|---|
Probab=99.77 E-value=3.2e-18 Score=163.79 Aligned_cols=63 Identities=24% Similarity=0.325 Sum_probs=49.0
Q ss_pred cEEEEEeCCCCCcC----h-------------HHHHHHhhCCCCCEEEEcCCCC-CCc----------HHHHHHHHcCCC
Q 018902 39 VRIVIVGDVHDDWD----L-------------QEDSKALQLLKPDLVLFTGDFG-NEN----------VEIVQSVAELEF 90 (349)
Q Consensus 39 mril~iSDlH~~~~----~-------------~~~~~~i~~~~pD~vI~~GDl~-~~~----------~~~l~~l~~l~~ 90 (349)
|||+|+||+|++.. . +++++.++..+||+||++||++ +.. .++++.|... +
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l~~~-~ 79 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRT-A 79 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSSCCHHHHHHHHHHHHHHHHH-S
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccCCCCCHHHHHHHHHHHHHHHhC-C
Confidence 89999999999875 1 4455666678999999999999 631 2355556555 8
Q ss_pred CEEEEcCCCCCC
Q 018902 91 PKAVILGNHDSW 102 (349)
Q Consensus 91 Pi~~V~GNHD~~ 102 (349)
|+++|+||||..
T Consensus 80 ~v~~i~GNHD~~ 91 (379)
T 3tho_B 80 PVVVLPGNQDWK 91 (379)
T ss_dssp CEEECCCTTSCT
T ss_pred CEEEEcCCCccc
Confidence 999999999954
|
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 | Back alignment and structure |
|---|
Probab=99.76 E-value=2.5e-17 Score=159.91 Aligned_cols=205 Identities=12% Similarity=0.069 Sum_probs=120.2
Q ss_pred CCccEEEEEeCCCCCcChHHHHHHhhCC--CCCEEEEcCCCCCCc-------------HHHHHHHHcCCCCEEEEcCCCC
Q 018902 36 ASVVRIVIVGDVHDDWDLQEDSKALQLL--KPDLVLFTGDFGNEN-------------VEIVQSVAELEFPKAVILGNHD 100 (349)
Q Consensus 36 ~~~mril~iSDlH~~~~~~~~~~~i~~~--~pD~vI~~GDl~~~~-------------~~~l~~l~~l~~Pi~~V~GNHD 100 (349)
..++||+++||+|.+......++.+.+. +||+||++||++... .+.++.+.. .+|+++++||||
T Consensus 124 ~~~~~f~~~gD~~~~~~~~~~l~~i~~~~~~~D~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~l~~-~~P~~~v~GNHD 202 (426)
T 1xzw_A 124 DVPYVFGLIGDIGQTHDSNTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVA-YQPWIWTAGNHE 202 (426)
T ss_dssp TCCEEEEEECSCTTBHHHHHHHHHHHHCTTCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHT-TSCEECCCCGGG
T ss_pred CCCeEEEEEEeCCCCCchHHHHHHHHhCCCCCCEEEeCCChhhcccCCcccchHHHHHHHHHHHHHh-cCCEEEeccccc
Confidence 5679999999999875445566666654 999999999998531 223444443 789999999999
Q ss_pred CCcccccc-ccchhHHHHHHHHhCC----cceeeEEeecCCceEEEeCCeeeecCCchhhhhhhhhhccCCcchHHHHHH
Q 018902 101 SWKTQEFS-GKKKDGVQLQLECLGE----EHVAYRRLDFPTLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMDESAKR 175 (349)
Q Consensus 101 ~~~~~~~~-~~~~~~~~~~l~~~~~----~~~~~~~l~~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 175 (349)
........ ......++..+..... ..-.+..++...+.+.++++... ++. ..++.+|
T Consensus 203 ~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~----------------~~~--~~~Q~~W 264 (426)
T 1xzw_A 203 IDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIVLSSYSG----------------FVK--YSPQYKW 264 (426)
T ss_dssp CCCBGGGTBCSTTHHHHHHSCCCCGGGTCSSTTSEEEEETTEEEEECCTTSC----------------CST--TSHHHHH
T ss_pred cccCCccccccCChhheEEEeCCcccCCCCCCCeEEEEECCEEEEEeeCccc----------------CCC--CHHHHHH
Confidence 87532110 0011122222211000 00012222334444544443210 111 2345678
Q ss_pred HHHHHhCCC--CCCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCccEEEeCccCCCccc
Q 018902 176 IYKVALGTP--DDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKELAY 253 (349)
Q Consensus 176 l~~~l~~~~--~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~~~ 253 (349)
|.+.+++.+ ..+++||++|+|++..+.. .+. ....+++.+..+++ +++++++|+||+|..++.
T Consensus 265 L~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~-------~~~------~~~~~r~~l~~ll~--~~~VdlvlsGH~H~~~r~ 329 (426)
T 1xzw_A 265 FTSELEKVNRSETPWLIVLVHAPLYNSYEA-------HYM------EGEAMRAIFEPYFV--YYKVDIVFSGHVHSYERS 329 (426)
T ss_dssp HHHHHHHCCTTTCCEEEEECSSCSSCCBST-------TTT------TTHHHHHHHHHHHH--HTTCSEEEECSSSSEEEE
T ss_pred HHHHHHhhhhcCCCEEEEEeccCceeCCCc-------ccC------CCHHHHHHHHHHHH--HhCCCEEEEcChhhheee
Confidence 888887764 3456999999998654211 000 12456788888888 457999999999998543
Q ss_pred CC----------cceEEEEEcCCceEEEeecc
Q 018902 254 GN----------GLRKMIVVGADSTIYLNGAI 275 (349)
Q Consensus 254 ~~----------g~~~~~~~~~~gt~yvn~g~ 275 (349)
.. |... ...++++++||..|.
T Consensus 330 ~p~~~~~~~~~~g~~~-~~~~~~g~~yi~~G~ 360 (426)
T 1xzw_A 330 ERVSNVAYNIVNAKCT-PVSDESAPVYITIGD 360 (426)
T ss_dssp CSEECCCCCSTTCCCC-CEECTTSCEEEEECC
T ss_pred eeecCccccccCCccc-cccCCCccEEEEeCC
Confidence 20 1000 012356899998876
|
| >2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.1e-17 Score=141.57 Aligned_cols=63 Identities=21% Similarity=0.177 Sum_probs=48.1
Q ss_pred CccEEEEEeCCCC--CcC-hHHHHHHhhCCCCCEEEEcCCCCCCcHHHHHHHHcCCCCEEEEcCCCCCC
Q 018902 37 SVVRIVIVGDVHD--DWD-LQEDSKALQLLKPDLVLFTGDFGNENVEIVQSVAELEFPKAVILGNHDSW 102 (349)
Q Consensus 37 ~~mril~iSDlH~--~~~-~~~~~~~i~~~~pD~vI~~GDl~~~~~~~l~~l~~l~~Pi~~V~GNHD~~ 102 (349)
.+|||+++||+|+ +.. .++.++.+. .++|+||++||+++. +.++.|.++..|+++|+||||..
T Consensus 21 ~mmri~~iSD~Hg~~~~~~l~~~l~~~~-~~~D~ii~~GD~~~~--~~~~~l~~~~~~v~~V~GNhD~~ 86 (178)
T 2kkn_A 21 GVKRFLLISDSHVPVRMASLPDEILNSL-KEYDGVIGLGDYVDL--DTVILLEKFSKEFYGVHGNMDYP 86 (178)
T ss_dssp -CEEEEEECCCCBTTTTCCCCHHHHHGG-GGCSEEEESSCBSCH--HHHHHHHHHTSSEEECCCSSSCG
T ss_pred cceEEEEEecccCCCCHHHHHHHHHHHh-cCCCEEEECCCCCCH--HHHHHHHhcCCCEEEEECCCCcH
Confidence 4589999999995 222 245555554 789999999999983 66677766667999999999964
|
| >1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A | Back alignment and structure |
|---|
Probab=99.76 E-value=4.2e-18 Score=153.55 Aligned_cols=65 Identities=11% Similarity=0.194 Sum_probs=49.5
Q ss_pred ccEEEEEeCCCCCcCh-HHHHHHhh---CC--CCCEEEEcCCCCCC---cHHHHHHHHcCC--CCEEEEcCCCCCC
Q 018902 38 VVRIVIVGDVHDDWDL-QEDSKALQ---LL--KPDLVLFTGDFGNE---NVEIVQSVAELE--FPKAVILGNHDSW 102 (349)
Q Consensus 38 ~mril~iSDlH~~~~~-~~~~~~i~---~~--~pD~vI~~GDl~~~---~~~~l~~l~~l~--~Pi~~V~GNHD~~ 102 (349)
+|||+++||+|++... +++++.++ .. ++|+||++||+++. ..++++.|.++. .|+++|+||||..
T Consensus 1 mm~i~~isD~H~~~~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g~~~~~~~~~l~~l~~~~~~~~v~GNhD~~ 76 (252)
T 1nnw_A 1 MVYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYPKEVIEVIKDLTKKENVKIIRGKYDQI 76 (252)
T ss_dssp -CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSCHHHHHHHHHHHHHHSCEEEECCHHHHH
T ss_pred CcEEEEEeecCCCHHHHHHHHHHHHhhhhccCCCCEEEEeCccCCCCCCHHHHHHHHHhhHhhcCeeEEecchHHH
Confidence 4899999999997653 55666666 55 89999999999974 245556665543 6899999999964
|
| >4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B* | Back alignment and structure |
|---|
Probab=99.76 E-value=5.5e-17 Score=155.66 Aligned_cols=218 Identities=18% Similarity=0.165 Sum_probs=118.0
Q ss_pred CCccEEEEEeCCCCCcCh-------------HHHHHHhhCCCCCEEEEcCCCCCCc-------HHHHHHHHc--------
Q 018902 36 ASVVRIVIVGDVHDDWDL-------------QEDSKALQLLKPDLVLFTGDFGNEN-------VEIVQSVAE-------- 87 (349)
Q Consensus 36 ~~~mril~iSDlH~~~~~-------------~~~~~~i~~~~pD~vI~~GDl~~~~-------~~~l~~l~~-------- 87 (349)
.++|||+|+||+|++... +++++.+++.+||+||++|||++.. ..+++.|.+
T Consensus 11 ~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~p~~~~~~~~~~~lr~~~~g~~~~ 90 (417)
T 4fbw_A 11 ENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGDKPC 90 (417)
T ss_dssp TTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBSSCCC
T ss_pred CCCeEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccCCcc
Confidence 467999999999998531 4567777789999999999999852 123333222
Q ss_pred ----------------------------CCCCEEEEcCCCCCCccccccccchhHHHHHHHHhCCcceeeEEeecC----
Q 018902 88 ----------------------------LEFPKAVILGNHDSWKTQEFSGKKKDGVQLQLECLGEEHVAYRRLDFP---- 135 (349)
Q Consensus 88 ----------------------------l~~Pi~~V~GNHD~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~---- 135 (349)
.++|||+|.||||......+. .....+...+...+-......+
T Consensus 91 ~~e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~~~~~~~-----s~~~lL~~~g~v~l~g~~~~~~~i~~ 165 (417)
T 4fbw_A 91 ELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGDGRY-----SALDILQVTGLVNYFGRVPENDNIVV 165 (417)
T ss_dssp CCEECC------------CCGGGCTTBCBSSCEEECCCGGGC-----CC-----CHHHHHHHTTSCEECCCCC---CEEE
T ss_pred cceeccchhhhcccccccccccccccccCCCeEEEEecCCCCccccccc-----cHHHHhccCCeEEEeCCcccCCceeE
Confidence 378999999999986432210 1233444444321100000000
Q ss_pred -CceEEEeCCeeeecCCchhhhhhhhhhccCCcchHHHHHHHHHHHh--------C--CCCCCeEEEEeccCCCCCCCCC
Q 018902 136 -TLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMDESAKRIYKVAL--------G--TPDDHLVILLAHNGPSGLGSEP 204 (349)
Q Consensus 136 -~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--------~--~~~~~~~Ilv~H~PP~~~g~~~ 204 (349)
.+.+. .|+....+.|..+... +++.+.+. . ...+.++|++.|....+.+.
T Consensus 166 ~pv~l~-~g~~~valyG~~~~~d----------------~rl~r~~~~~~v~~~~p~~~~~~~~nIlvlH~~~~~~~~-- 226 (417)
T 4fbw_A 166 SPILLQ-KGFTKLALYGISNVRD----------------ERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNHSAHTP-- 226 (417)
T ss_dssp CCEEEE-ETTEEEEEEEECCCCH----------------HHHHHHHHTTCEEEEEESTTTTTSEEEEEEESCSSCSSS--
T ss_pred EeEEEE-ecCceEEEEeccCCch----------------hhhhhhhhhhhhhhcCcccccCCceEEEEecCCccCCCC--
Confidence 11111 2333343333321100 11111110 0 12457899999985432210
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCccEEEeCccCCCcccCCcceEEEEEcCCceEEEeecccceeeccCC
Q 018902 205 NDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKELAYGNGLRKMIVVGADSTIYLNGAIVPRVKRLID 284 (349)
Q Consensus 205 ~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~~~~~g~~~~~~~~~~gt~yvn~g~~pr~~~~~~ 284 (349)
.++.+ ..++ ..++|+|++||+|.++... . .-..+++.++|||+..+....++
T Consensus 227 -----~~yip--------------~~l~---~~~~DyvalGH~H~~~~~~----~--~~~~~g~~i~~PGS~~~~s~~e~ 278 (417)
T 4fbw_A 227 -----TSYLP--------------ESFI---QDFYDFVLWGHEHECLIDG----S--YNPTQKFTVVQPGSTIATSLSPG 278 (417)
T ss_dssp -----SSSCC--------------GGGS---CTTCSEEEEESCCSCEEEE----E--EETTTTEEEEECCCSSCSSCCHH
T ss_pred -----cccCc--------------hhHh---hcCCCEEEecCccccceec----c--ccCCCCEEEEECCCCCcCCCccc
Confidence 01111 1122 3579999999999983210 0 00125789999999654332210
Q ss_pred ccCCCCCcccccccccCCCCCCceeeEEEEEEeCCeEeEEE
Q 018902 285 EQGADSSSVSNKTSFLRPDSKGTVRAFTVVEILDGRIDKIA 325 (349)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~v~i~~~~v~~~~ 325 (349)
. ...++|++|+++++++..+.
T Consensus 279 E--------------------~~~kg~~lvei~~~~~~~e~ 299 (417)
T 4fbw_A 279 E--------------------TAPKHCGILNITGKDFHLEK 299 (417)
T ss_dssp H--------------------HSCCEEEEEEEETTEEEEEE
T ss_pred c--------------------CCCCEEEEEEEECCEEEEEE
Confidence 0 13589999999998876544
|
| >3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=5.5e-17 Score=148.12 Aligned_cols=67 Identities=19% Similarity=0.254 Sum_probs=53.7
Q ss_pred CCCccEEEEEeCCCCCcCh-HHHHHHhhCCCCCEEEEcCCCCCC---cHHHHHHHHcCCCCEEEEcCCCCCC
Q 018902 35 SASVVRIVIVGDVHDDWDL-QEDSKALQLLKPDLVLFTGDFGNE---NVEIVQSVAELEFPKAVILGNHDSW 102 (349)
Q Consensus 35 ~~~~mril~iSDlH~~~~~-~~~~~~i~~~~pD~vI~~GDl~~~---~~~~l~~l~~l~~Pi~~V~GNHD~~ 102 (349)
.+++.||+++||+|++... +++++.++..++|.||++||+++. ..++++.|.++. |+++|+||||..
T Consensus 8 ~~~~~~i~~iSDiHg~~~~l~~vl~~~~~~~~D~ii~~GDlv~~g~~~~~~~~~l~~~~-~~~~v~GNhD~~ 78 (270)
T 3qfm_A 8 HMDMTKIALLSDIHGNTTALEAVLADARQLGVDEYWLLGDILMPGTGRRRILDLLDQLP-ITARVLGNWEDS 78 (270)
T ss_dssp ---CEEEEEECCCTTCHHHHHHHHHHHHHTTCCEEEECSCCSSSSSCSHHHHHHHHTSC-EEEECCCHHHHH
T ss_pred cccccEEEEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHccC-CEEEEcCChHHH
Confidence 3567899999999998754 667778877899999999999974 467888888753 789999999964
|
| >1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A | Back alignment and structure |
|---|
Probab=99.73 E-value=1.2e-16 Score=150.19 Aligned_cols=65 Identities=22% Similarity=0.370 Sum_probs=50.4
Q ss_pred cEEEEEeCCCCCcCh--------------HHHHHHhhCCCCCEEEEcCCCCCCc----------HHHHHHHHcCCCCEEE
Q 018902 39 VRIVIVGDVHDDWDL--------------QEDSKALQLLKPDLVLFTGDFGNEN----------VEIVQSVAELEFPKAV 94 (349)
Q Consensus 39 mril~iSDlH~~~~~--------------~~~~~~i~~~~pD~vI~~GDl~~~~----------~~~l~~l~~l~~Pi~~ 94 (349)
|||+|+||+|++... +++++.+++.+||+||++||+++.. .+.++.|...++|+++
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~~~~~v~~ 80 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVFA 80 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCEEE
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHCCCcEEE
Confidence 799999999998631 3456666778999999999999742 1245555555789999
Q ss_pred EcCCCCCCc
Q 018902 95 ILGNHDSWK 103 (349)
Q Consensus 95 V~GNHD~~~ 103 (349)
|+||||...
T Consensus 81 v~GNHD~~~ 89 (333)
T 1ii7_A 81 IEGNHDRTQ 89 (333)
T ss_dssp ECCTTTCCS
T ss_pred eCCcCCCcc
Confidence 999999863
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=8.7e-17 Score=156.01 Aligned_cols=204 Identities=14% Similarity=0.123 Sum_probs=118.2
Q ss_pred CCccEEEEEeCCCCCcChHHHHHHhhCC--CCCEEEEcCCCCCCc-------------HHHHHHHHcCCCCEEEEcCCCC
Q 018902 36 ASVVRIVIVGDVHDDWDLQEDSKALQLL--KPDLVLFTGDFGNEN-------------VEIVQSVAELEFPKAVILGNHD 100 (349)
Q Consensus 36 ~~~mril~iSDlH~~~~~~~~~~~i~~~--~pD~vI~~GDl~~~~-------------~~~l~~l~~l~~Pi~~V~GNHD 100 (349)
..+|||+++||+|.+......++.+.+. +||+||++||+++.. .++++.+.. .+|+++++||||
T Consensus 117 ~~~~~f~~igD~~~~~~~~~~l~~~~~~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~~~-~~P~~~v~GNHD 195 (424)
T 2qfp_A 117 DVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVA-YQPWIWTAGNHE 195 (424)
T ss_dssp TCCEEEEEECSCTTBHHHHHHHHHHHTCSSCCCEEEECSCCSCGGGSGGGCTHHHHHHHHHHHHHHT-TSCEEECCCHHH
T ss_pred CCCeEEEEEEeCCCCCChHHHHHHHHhCCCCCCEEEEcCccccccccccccchHHHHHHHHHHHHHh-cCCeEeecCCcc
Confidence 4679999999999976544456666654 899999999999642 234444444 689999999999
Q ss_pred CCccccccccchhHHHHHHHHhCCc-------ceeeEEeecCCceEEEeCCeeeecCCchhhhhhhhhhccCCcchHHHH
Q 018902 101 SWKTQEFSGKKKDGVQLQLECLGEE-------HVAYRRLDFPTLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMDESA 173 (349)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~~~l~~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 173 (349)
.......... ..+......+... .-.+..++...+.+.+++... .++. ..++.
T Consensus 196 ~~~~~~~~~~--~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~~i~Ldt~~----------------~~~~--~~~Q~ 255 (424)
T 2qfp_A 196 IEFAPEINET--EPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYS----------------AYGR--GTPQY 255 (424)
T ss_dssp HCCBGGGTBC--STTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTS----------------CCST--TSHHH
T ss_pred cccCCccccc--ccchhhhhhccCCccccCCCCCcEEEEEECCEEEEEecCCc----------------cCCC--cHHHH
Confidence 8643211100 0111122222110 001222233444444443321 0111 12457
Q ss_pred HHHHHHHhCCCC--CCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCccEEEeCccCCCc
Q 018902 174 KRIYKVALGTPD--DHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKEL 251 (349)
Q Consensus 174 ~~l~~~l~~~~~--~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~ 251 (349)
+||.+.+++.++ .+++|+++|+|++..+.. .|. ....+++.+..+++ +++++++|+||+|...
T Consensus 256 ~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~-------~~~------~~~~~r~~l~~ll~--~~~VdlvlsGH~H~y~ 320 (424)
T 2qfp_A 256 TWLKKELRKVKRSETPWLIVLMHSPLYNSYNH-------HFM------EGEAMRTKFEAWFV--KYKVDVVFAGHVHAYE 320 (424)
T ss_dssp HHHHHHHHHCCTTTCCEEEEECSSCSSCCBST-------TTT------TTHHHHHHHHHHHH--HTTCSEEEECSSSSEE
T ss_pred HHHHHHHhhhcccCCCEEEEEeCcCceecCcc-------ccc------ccHHHHHHHHHHHH--HhCCcEEEECChhhhh
Confidence 788888877643 457899999988654211 111 12456677888888 4579999999999964
Q ss_pred ccC--CcceEE-------EEEcCCceEEEeecc
Q 018902 252 AYG--NGLRKM-------IVVGADSTIYLNGAI 275 (349)
Q Consensus 252 ~~~--~g~~~~-------~~~~~~gt~yvn~g~ 275 (349)
+.. .+.... ...++++++||..|.
T Consensus 321 r~~~~~~~~~~~~~g~~~~~~~~~~~vyi~~G~ 353 (424)
T 2qfp_A 321 RSERVSNIAYKITNGLCTPVKDQSAPVYITIGD 353 (424)
T ss_dssp EECSEECCCCCSSSCCCSCEECTTSCEEEEECC
T ss_pred eeccccCcceeccCCccccccCCCCcEEEEecC
Confidence 321 110000 012346788888775
|
| >3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0 | Back alignment and structure |
|---|
Probab=99.71 E-value=8.6e-18 Score=151.30 Aligned_cols=63 Identities=27% Similarity=0.295 Sum_probs=49.5
Q ss_pred CccEEEEEeCCCCCcCh-HHHHHHhhCCCCCEEEEcCCCCCC---cHHHHHHHHcCCCCEEEEcCCCCCC
Q 018902 37 SVVRIVIVGDVHDDWDL-QEDSKALQLLKPDLVLFTGDFGNE---NVEIVQSVAELEFPKAVILGNHDSW 102 (349)
Q Consensus 37 ~~mril~iSDlH~~~~~-~~~~~~i~~~~pD~vI~~GDl~~~---~~~~l~~l~~l~~Pi~~V~GNHD~~ 102 (349)
++|||+++||+|++... +++++.+. ++|.|+++||+++. ..++++.+.++.. +++|+||||..
T Consensus 2 ~~mri~~isDiHg~~~~l~~~l~~~~--~~d~ii~~GDl~~~g~~~~~~~~~l~~~~~-~~~v~GNhD~~ 68 (246)
T 3rqz_A 2 NAMRILIISDVHANLVALEAVLSDAG--RVDDIWSLGDIVGYGPRPRECVELVRVLAP-NISVIGNHDWA 68 (246)
T ss_dssp CCCCEEEECCCTTCHHHHHHHHHHHC--SCSEEEECSCCSSSSSCHHHHHHHHHHHCS-SEECCCHHHHH
T ss_pred CCcEEEEEeecCCCHHHHHHHHHhcc--CCCEEEECCCcCCCCCCHHHHHHHHHhcCC-CEEEeCchHHH
Confidence 56999999999987653 55666665 99999999999974 3567777766543 69999999964
|
| >1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.69 E-value=3.7e-16 Score=137.12 Aligned_cols=65 Identities=17% Similarity=0.297 Sum_probs=53.1
Q ss_pred ccEEEEEeCCCCCcCh-HHHHHHhhCCCCCEEEEcCCCCCC-----------cHHHHHHHHcCCCCEEEEcCCCCCC
Q 018902 38 VVRIVIVGDVHDDWDL-QEDSKALQLLKPDLVLFTGDFGNE-----------NVEIVQSVAELEFPKAVILGNHDSW 102 (349)
Q Consensus 38 ~mril~iSDlH~~~~~-~~~~~~i~~~~pD~vI~~GDl~~~-----------~~~~l~~l~~l~~Pi~~V~GNHD~~ 102 (349)
+|||+++||+|++... +++++.++..++|+||++||+++. ..++++.|.++..|+++|+||||..
T Consensus 25 mmki~~iSD~H~~~~~l~~~l~~~~~~~~d~vi~~GDl~~~g~~~~~~~~~~~~~~~~~l~~~~~~v~~V~GNHD~~ 101 (208)
T 1su1_A 25 MMKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEVAHKVIAVRGNCDSE 101 (208)
T ss_dssp CCEEEEECCCTTBHHHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTTGGGEEECCCTTCCH
T ss_pred cEEEEEEEcCCCCHHHHHHHHHHHHhcCCCEEEECCCccccCcccccccccCHHHHHHHHHhcCCceEEEECCCchH
Confidence 4899999999987643 556677766789999999999863 2567888888777999999999963
|
| >1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8 | Back alignment and structure |
|---|
Probab=99.66 E-value=1.2e-15 Score=132.38 Aligned_cols=65 Identities=22% Similarity=0.171 Sum_probs=49.9
Q ss_pred ccEEEEEeCCCCCcCh--------------HHHHHHhhC--CCCCEEEEcCCCCCC---cHHHHHHHHcCCCCEEEEcCC
Q 018902 38 VVRIVIVGDVHDDWDL--------------QEDSKALQL--LKPDLVLFTGDFGNE---NVEIVQSVAELEFPKAVILGN 98 (349)
Q Consensus 38 ~mril~iSDlH~~~~~--------------~~~~~~i~~--~~pD~vI~~GDl~~~---~~~~l~~l~~l~~Pi~~V~GN 98 (349)
.|||+++||+|++... +.+++.++. .++|+||++||+++. ..++++.|.+++.|+++|+||
T Consensus 1 ~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~l~~l~~~~~~v~GN 80 (195)
T 1xm7_A 1 NAMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHFNDKNEYLRIWKALPGRKILVMGN 80 (195)
T ss_dssp CCCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCSCCTTSHHHHHHHSSSEEEEECCT
T ss_pred CcEEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCCEEEECCCCCCCchhHHHHHHHHHHCCCCEEEEeCC
Confidence 4899999999986542 234555555 489999999999874 335666777777789999999
Q ss_pred CCCC
Q 018902 99 HDSW 102 (349)
Q Consensus 99 HD~~ 102 (349)
||..
T Consensus 81 hD~~ 84 (195)
T 1xm7_A 81 HDKD 84 (195)
T ss_dssp TCCC
T ss_pred CCCc
Confidence 9974
|
| >1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A | Back alignment and structure |
|---|
Probab=99.45 E-value=6.8e-12 Score=124.55 Aligned_cols=66 Identities=15% Similarity=0.175 Sum_probs=47.2
Q ss_pred CCccEEEEEeCCCCCcC-----------hHHHHHHhhCC----CC-CEEEEcCCCCCCc--------HHHHHHHHcCCCC
Q 018902 36 ASVVRIVIVGDVHDDWD-----------LQEDSKALQLL----KP-DLVLFTGDFGNEN--------VEIVQSVAELEFP 91 (349)
Q Consensus 36 ~~~mril~iSDlH~~~~-----------~~~~~~~i~~~----~p-D~vI~~GDl~~~~--------~~~l~~l~~l~~P 91 (349)
...|||+++||+|.... ...+++.+++. ++ +++|.+||+++.. ...++.|+.++.
T Consensus 6 ~~~l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~~~~~~~~~~~~~ln~lg~- 84 (516)
T 1hp1_A 6 TYKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGY- 84 (516)
T ss_dssp CEEEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHHTC-
T ss_pred ceEEEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcchhhhcCCcHHHHHHhccCC-
Confidence 35699999999999643 13455555533 35 7999999998742 345666777664
Q ss_pred EEEEcCCCCCC
Q 018902 92 KAVILGNHDSW 102 (349)
Q Consensus 92 i~~V~GNHD~~ 102 (349)
-++++||||+.
T Consensus 85 d~~~~GNHEfd 95 (516)
T 1hp1_A 85 DAMAIGNHEFD 95 (516)
T ss_dssp CEEECCGGGGS
T ss_pred CEEeecccccc
Confidence 47899999975
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=99.42 E-value=1.2e-12 Score=115.58 Aligned_cols=65 Identities=23% Similarity=0.327 Sum_probs=49.4
Q ss_pred CCccEEEEEeCCCCCcCh-HHHHHHhhC-CCCCEEEEcCCCCCCc---HHHHHHHHcCCCCEEEEcCCCCCC
Q 018902 36 ASVVRIVIVGDVHDDWDL-QEDSKALQL-LKPDLVLFTGDFGNEN---VEIVQSVAELEFPKAVILGNHDSW 102 (349)
Q Consensus 36 ~~~mril~iSDlH~~~~~-~~~~~~i~~-~~pD~vI~~GDl~~~~---~~~l~~l~~l~~Pi~~V~GNHD~~ 102 (349)
++.|||+++||+|++... +++++.+.. .++|.||++||++++. .++++.+.+ .++++|+||||..
T Consensus 10 ~~~~~i~visDiHg~~~~l~~~l~~~~~~~~~d~~i~~GD~~~~g~~~~~~~~~l~~--~~~~~v~GNhd~~ 79 (221)
T 1g5b_A 10 SKYRNIWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENVECLELITF--PWFRAVRGNHEQM 79 (221)
T ss_dssp GGCSCEEEECCCTTCHHHHHHHHHHHTCCTTTCEEEECSCCSSSSSCHHHHHGGGGS--TTEEECCCHHHHH
T ss_pred CCCceEEEEEcCCCCHHHHHHHHHHccCCCCCCEEEEeCCccCCCCChHHHHHHHhc--CCEEEEccCcHHH
Confidence 345899999999987653 556666654 3789999999999864 455555543 5899999999954
|
| >2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A | Back alignment and structure |
|---|
Probab=99.30 E-value=2.4e-10 Score=114.36 Aligned_cols=192 Identities=18% Similarity=0.191 Sum_probs=101.1
Q ss_pred HHHHhhCC--C--CC-EEEEcCCCCCCc--------HHHHHHHHcCCCCEEEEcCCCCCCccccccccchhHHHHHHHHh
Q 018902 56 DSKALQLL--K--PD-LVLFTGDFGNEN--------VEIVQSVAELEFPKAVILGNHDSWKTQEFSGKKKDGVQLQLECL 122 (349)
Q Consensus 56 ~~~~i~~~--~--pD-~vI~~GDl~~~~--------~~~l~~l~~l~~Pi~~V~GNHD~~~~~~~~~~~~~~~~~~l~~~ 122 (349)
+++.+++. + || ++|.+||+++.. ...++.++.++.+++ + ||||+... .+.+.+.+...
T Consensus 110 ~v~~~r~~~~~~gpd~Lll~~GD~~~gs~~~~~~~g~~~~~~ln~lg~d~~-~-GNHEfd~G-------~~~l~~~l~~~ 180 (562)
T 2wdc_A 110 LIRDQKARVEAEGGKALVLDGGDTWTNSGLSLLTRGEAVVRWQNLVGVDHM-V-SHWEWTLG-------RERVEELLGLF 180 (562)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCCSSSSHHHHHHTTHHHHHHHHHHTCCEE-C-CSGGGGGC-------HHHHHHHHHHC
T ss_pred HHHHHHhhhhcCCCCEEEEeCCCCCCcchhhhhhCCHHHHHHHHhhCCcEE-e-cchhcccC-------HHHHHHHHHhC
Confidence 45555544 4 88 899999999853 345677777788865 6 99996422 23355555543
Q ss_pred CCcce---------------eeEEeecCCceEEEeCCeeeecCCchhhhhhhhhhccCCcchHHHHHHHHHHHhCCCCCC
Q 018902 123 GEEHV---------------AYRRLDFPTLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMDESAKRIYKVALGTPDDH 187 (349)
Q Consensus 123 ~~~~~---------------~~~~l~~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 187 (349)
+-..+ .+..++..+.++.++|-. ...................+..+.+.+..+.+++. ..+
T Consensus 181 ~~p~L~aNv~~~~~~~~~~~py~i~e~~G~kIgiiG~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~d 256 (562)
T 2wdc_A 181 RGEFLSYNIVDDLFGDPLFPAYRIHRVGPYALAVVGAS---YPYVKVSHPESFTEGLSFALDERRLQEAVDKARAE-GAN 256 (562)
T ss_dssp CSEECCSSCEETTTCCBSSCSEEEEEETTEEEEEEEEC---CTTHHHHSCGGGGTTEECCCCHHHHHHHHHHHHHT-TCS
T ss_pred CCCEEEEEEEecCCCCcccCCeEEEEECCeEEEEEeec---cCcccccccccccCCcEEeCHHHHHHHHHHHHHHC-CCC
Confidence 32111 122223334444444421 10000000000000011122223344444555432 346
Q ss_pred eEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCccEEEeCccCCCcccCCcceEEEEEcCCc
Q 018902 188 LVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKELAYGNGLRKMIVVGADS 267 (349)
Q Consensus 188 ~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~~~~~g~~~~~~~~~~g 267 (349)
..|+++|.|. +.. .+++++. .++|++++||+|....+. ... ++
T Consensus 257 ~iIvLsH~g~-------------------------~~d---~~la~~~-~giDlIlgGHtH~~~~~~---~~~-----~~ 299 (562)
T 2wdc_A 257 AVVLLSHNGM-------------------------QLD---AALAERI-RGIDLILSGHTHDLTPRP---WRV-----GK 299 (562)
T ss_dssp EEEEEECSCH-------------------------HHH---HHHHTTS-SSCCEEEECSSCCCCSSC---EEE-----TT
T ss_pred EEEEEeCCCC-------------------------cch---HHHHhcC-CCCcEEEeCCCCCCCccC---EEE-----CC
Confidence 7999999852 110 1233322 379999999999974211 122 57
Q ss_pred eEEEeecccceeeccCCccCCCCCcccccccccCCCCCCceeeEEEEEEeCCeEeEEEE
Q 018902 268 TIYLNGAIVPRVKRLIDEQGADSSSVSNKTSFLRPDSKGTVRAFTVVEILDGRIDKIAE 326 (349)
Q Consensus 268 t~yvn~g~~pr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~v~i~~~~v~~~~~ 326 (349)
++++.+|+. ++.-+..-+++++++++....
T Consensus 300 t~vvqag~~-----------------------------g~~lg~i~l~~~~g~v~~~~~ 329 (562)
T 2wdc_A 300 TWIVAGSAA-----------------------------GKALMRVDLKLWKGGIANLRV 329 (562)
T ss_dssp EEEEECCST-----------------------------TCEEEEEEEEEETTEEEEEEE
T ss_pred EEEEecCcc-----------------------------ccEEEEEEEEEeCCcEEEEee
Confidence 888888863 444566667778887754443
|
| >3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.27 E-value=4.9e-10 Score=111.44 Aligned_cols=206 Identities=14% Similarity=0.104 Sum_probs=106.1
Q ss_pred CCccEEEEEeCCCCCcC-----------------hHHHHHHhhCCCCC-EEEEcCCCCCCc-------------HHHHHH
Q 018902 36 ASVVRIVIVGDVHDDWD-----------------LQEDSKALQLLKPD-LVLFTGDFGNEN-------------VEIVQS 84 (349)
Q Consensus 36 ~~~mril~iSDlH~~~~-----------------~~~~~~~i~~~~pD-~vI~~GDl~~~~-------------~~~l~~ 84 (349)
...++|++++|+|+... ...+++.+++..++ ++|.+||+++.. ...++.
T Consensus 17 ~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~~~~~~ 96 (527)
T 3qfk_A 17 GSNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSPFCNYLIAHSGSSQPLVDF 96 (527)
T ss_dssp -CEEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSSSHHHHHHHHTTCSSHHHHHH
T ss_pred CCcEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCCcHHHHHHhhcccCcchHHHH
Confidence 46799999999998642 14567777777777 677799998753 346667
Q ss_pred HHcCCCCEEEEcCCCCCCccccccccchhHHHHHHHHhCCcce--------------eeEEeecCCceEEEeCCeeeecC
Q 018902 85 VAELEFPKAVILGNHDSWKTQEFSGKKKDGVQLQLECLGEEHV--------------AYRRLDFPTLKLSIVGGRPFSCG 150 (349)
Q Consensus 85 l~~l~~Pi~~V~GNHD~~~~~~~~~~~~~~~~~~l~~~~~~~~--------------~~~~l~~~~~~i~~~g~~~~~~~ 150 (349)
|+.++.. ++++||||+.... +.+.+.+...+-..+ .+..++..+.++.++|... .
T Consensus 97 ln~lg~D-~~t~GNHefd~G~-------~~l~~~~~~~~~p~l~aNv~~~g~p~~~~py~i~e~~G~kIgviG~~~---~ 165 (527)
T 3qfk_A 97 YNRMAFD-FGTLGNHEFNYGL-------PYLKDTLRRLNYPVLCANIYENDSTLTDNGVKYFQVGDQTVGVIGLTT---Q 165 (527)
T ss_dssp HHHTCCC-EECCCGGGGTTCH-------HHHHHHHHHCSSCBCCSSEEETTEESSSCSEEEEEETTEEEEEEEEEC---T
T ss_pred HHhcCCc-EEeccccccccCH-------HHHHHHHHhCCCCEEEeEeeeCCCCccCCCEEEEEECCEEEEEEEecc---C
Confidence 7777655 5679999965321 234444444331111 1333344455555554321 1
Q ss_pred CchhhhhhhhhhccCCcchHHHHHHHHHHHhCCCCCCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 018902 151 GQQIFRKRLLSVRYGVQDMDESAKRIYKVALGTPDDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISL 230 (349)
Q Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~ 230 (349)
....+............+..+.+.+..+.++ ...+..|+++|.+...... .+..... ..+.. ...+
T Consensus 166 ~~~~~~~~~~~~g~~~~d~~~~~~~~v~~l~--~~~D~iIvl~H~G~~~d~~-----~~~~~~~---~~~e~----~~~~ 231 (527)
T 3qfk_A 166 FIPHWEQPEHIQSLTFHSAFEILQQYLPEMK--RHADIIVVCYHGGFEKDLE-----SGTPTEV---LTGEN----EGYA 231 (527)
T ss_dssp TGGGTSCHHHHTTEEECCHHHHHHHHHHHHH--HHCSEEEEEEECCCSBCTT-----TCCBSSC---CSSSC----CHHH
T ss_pred CcccccCccccCCcEEcCHHHHHHHHHHHHH--hCCCEEEEEeCcCcccccc-----cCccccc---cccch----HHHH
Confidence 1000000000001112233344444555554 2245789999975311100 0000000 00110 0112
Q ss_pred HHHhcCCCccEEEeCccCCCcccCCcceEEEEEcCCceEEEeeccc
Q 018902 231 LKETTKLCIPLVVFGHMHKELAYGNGLRKMIVVGADSTIYLNGAIV 276 (349)
Q Consensus 231 l~~~~~~~~~lvl~GH~H~~~~~~~g~~~~~~~~~~gt~yvn~g~~ 276 (349)
++++...++|++++||+|.... ..+ ++++++++|+.
T Consensus 232 la~~~~~giDlIlgGHtH~~~~-----~~v-----~~~~ivqag~~ 267 (527)
T 3qfk_A 232 MLEAFSKDIDIFITGHQHRQIA-----ERF-----KQTAVIQPGTR 267 (527)
T ss_dssp HHHHHGGGCSEEECCSSCCEEE-----EEE-----TTEEEEEECST
T ss_pred HHHhcCCCCcEEEECCCCcccc-----eEE-----CCEEEeccChh
Confidence 2221112699999999999832 233 68999999873
|
| >2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=99.23 E-value=1.2e-09 Score=109.31 Aligned_cols=67 Identities=19% Similarity=0.157 Sum_probs=49.5
Q ss_pred CCccEEEEEeCCCCCcC------------------hHHHHHHhhCCCCC-EEEEcCCCCCCc--------HHHHHHHHcC
Q 018902 36 ASVVRIVIVGDVHDDWD------------------LQEDSKALQLLKPD-LVLFTGDFGNEN--------VEIVQSVAEL 88 (349)
Q Consensus 36 ~~~mril~iSDlH~~~~------------------~~~~~~~i~~~~pD-~vI~~GDl~~~~--------~~~l~~l~~l 88 (349)
...+||+|+||+|.... ...+++.+++..|| +++.+||+++.. ...++.|+.+
T Consensus 27 ~~~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~ln~l 106 (552)
T 2z1a_A 27 GFTLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLYFNQYRGLADRYFMHRL 106 (552)
T ss_dssp -CEEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHHHHHHTTHHHHHHHHHT
T ss_pred CeeEEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcHHHHHhCCcHHHHHHHhc
Confidence 45699999999997521 24466777777788 889999998753 3466777776
Q ss_pred CCCEEEEcCCCCCCc
Q 018902 89 EFPKAVILGNHDSWK 103 (349)
Q Consensus 89 ~~Pi~~V~GNHD~~~ 103 (349)
+.. ++++||||+..
T Consensus 107 g~d-~~~lGNHEfd~ 120 (552)
T 2z1a_A 107 RYR-AMALGNHEFDL 120 (552)
T ss_dssp TCC-EEECCGGGGTT
T ss_pred CCC-ccccccccccC
Confidence 554 78899999753
|
| >2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.13 E-value=5.8e-11 Score=107.62 Aligned_cols=62 Identities=27% Similarity=0.451 Sum_probs=47.7
Q ss_pred cEEEEEeCCCCCcCh-HHHHHHhhCCCC-CEEEEcCCCCCCc---HHHHHHHHcCCCCEEEEcCCCCCC
Q 018902 39 VRIVIVGDVHDDWDL-QEDSKALQLLKP-DLVLFTGDFGNEN---VEIVQSVAELEFPKAVILGNHDSW 102 (349)
Q Consensus 39 mril~iSDlH~~~~~-~~~~~~i~~~~p-D~vI~~GDl~~~~---~~~l~~l~~l~~Pi~~V~GNHD~~ 102 (349)
+||+++||+|++... +++++.+...++ |.+|++||++++. .++++.+.+ .++++|+||||..
T Consensus 19 ~~i~visDiHg~~~~l~~~l~~~~~~~~~d~ii~~GD~vd~g~~~~~~l~~l~~--~~~~~v~GNHd~~ 85 (262)
T 2qjc_A 19 GRVIIVGDIHGCRAQLEDLLRAVSFKQGSDTLVAVGDLVNKGPDSFGVVRLLKR--LGAYSVLGNHDAK 85 (262)
T ss_dssp SCEEEECCCTTCHHHHHHHHHHHTCCTTTSEEEECSCCSSSSSCHHHHHHHHHH--HTCEECCCHHHHH
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHhccCCCCEEEEecCCCCCCCCHHHHHHHHHH--CCCEEEeCcChHH
Confidence 499999999987543 556666666555 9999999999853 456666654 3799999999953
|
| >3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=4.1e-09 Score=104.28 Aligned_cols=67 Identities=24% Similarity=0.322 Sum_probs=48.6
Q ss_pred CCccEEEEEeCCCCCcC----------------h---HHHHHHhhCCCCCEEEE-cCCCCCCc--------HHHHHHHHc
Q 018902 36 ASVVRIVIVGDVHDDWD----------------L---QEDSKALQLLKPDLVLF-TGDFGNEN--------VEIVQSVAE 87 (349)
Q Consensus 36 ~~~mril~iSDlH~~~~----------------~---~~~~~~i~~~~pD~vI~-~GDl~~~~--------~~~l~~l~~ 87 (349)
...++|++++|+|+... . ..+++.+++..+|.+++ +||+++.. ...++.|+.
T Consensus 4 ~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~g~~~~~~~~g~~~~~~ln~ 83 (509)
T 3ive_A 4 AKDVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGPYISSLTKGKAIIDIMNT 83 (509)
T ss_dssp CEEEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHTTTTHHHHHHHTT
T ss_pred ceEEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCCCchhhhhcCChHHHHHHHh
Confidence 35689999999997532 1 44567777778888777 99998753 456777777
Q ss_pred CCCCEEEEcCCCCCCc
Q 018902 88 LEFPKAVILGNHDSWK 103 (349)
Q Consensus 88 l~~Pi~~V~GNHD~~~ 103 (349)
++.. ++++||||+..
T Consensus 84 lg~D-~~tlGNHEfd~ 98 (509)
T 3ive_A 84 MPFD-AVTIGNHEFDH 98 (509)
T ss_dssp SCCS-EECCCGGGGTT
T ss_pred cCCc-EEeeccccccc
Confidence 6554 56789999653
|
| >3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A* | Back alignment and structure |
|---|
Probab=99.11 E-value=6.6e-09 Score=104.35 Aligned_cols=65 Identities=22% Similarity=0.202 Sum_probs=47.0
Q ss_pred CccEEEEEeCCCCCcCh----------------------HHHHHHhhCCCCC-EEEEcCCCCCCc--------HHHHHHH
Q 018902 37 SVVRIVIVGDVHDDWDL----------------------QEDSKALQLLKPD-LVLFTGDFGNEN--------VEIVQSV 85 (349)
Q Consensus 37 ~~mril~iSDlH~~~~~----------------------~~~~~~i~~~~pD-~vI~~GDl~~~~--------~~~l~~l 85 (349)
-.++|+|++|+|+.... ..+++.+++..++ ++|.+||+++.. ...++.|
T Consensus 11 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l 90 (579)
T 3ztv_A 11 VELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYFTLFGGSADAAVM 90 (579)
T ss_dssp EEEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHHHTTTTHHHHHHH
T ss_pred eEEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceeeeecCCHHHHHHH
Confidence 45899999999975321 3456666666666 889999998753 4467777
Q ss_pred HcCCCCEEEEcCCCCCC
Q 018902 86 AELEFPKAVILGNHDSW 102 (349)
Q Consensus 86 ~~l~~Pi~~V~GNHD~~ 102 (349)
+.++.- ++++||||+.
T Consensus 91 n~lg~D-~~tlGNHEfd 106 (579)
T 3ztv_A 91 NAGNFH-YFTLGNHEFD 106 (579)
T ss_dssp HHHTCS-EEECCSGGGT
T ss_pred HhcCcC-eeeccccccc
Confidence 776654 5789999964
|
| >2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.11 E-value=2e-09 Score=106.76 Aligned_cols=203 Identities=13% Similarity=0.142 Sum_probs=112.1
Q ss_pred CccEEEEEeCCCCCcChHHHHHHhhCCCCCEEEEcCCCCCC--c--------------------H-H------------H
Q 018902 37 SVVRIVIVGDVHDDWDLQEDSKALQLLKPDLVLFTGDFGNE--N--------------------V-E------------I 81 (349)
Q Consensus 37 ~~mril~iSDlH~~~~~~~~~~~i~~~~pD~vI~~GDl~~~--~--------------------~-~------------~ 81 (349)
.++||+++||.+...........+.+.+||+||++||++-+ . . + .
T Consensus 115 ~~~rfa~~sc~~~~~g~~~~~~~ia~~~~D~vlhlGD~iY~d~~~~~~~~~~~~R~~~~~e~~tl~~yr~~y~~~~~dp~ 194 (527)
T 2yeq_A 115 PQMTFAFASCQQYEHGYYTAYKHMAKEKLDLVFHLGDYIYEYGPNEYVSKTGNVRTHNSAEIITLQDYRNRHAQYRSDAN 194 (527)
T ss_dssp CCEEEEEECCCCGGGCCCHHHHHHTTSCCSEEEECSCSSCCCCTTSSCCTTCCCSCCSSSSCCSHHHHHHHHHHHHTCHH
T ss_pred CCeEEEEEecCCCCCCccHHHHHHHhcCCCEEEecCCcccCCCCCcccccccccccCCcccccCHHHHHHHHHHHhCCHH
Confidence 67999999999874222235566666899999999998721 1 0 1 1
Q ss_pred HHHHHcCCCCEEEEcCCCCCCcccccc-cc---c--------hhHHHHHHHHhCC---------cceeeEEeecCC-ceE
Q 018902 82 VQSVAELEFPKAVILGNHDSWKTQEFS-GK---K--------KDGVQLQLECLGE---------EHVAYRRLDFPT-LKL 139 (349)
Q Consensus 82 l~~l~~l~~Pi~~V~GNHD~~~~~~~~-~~---~--------~~~~~~~l~~~~~---------~~~~~~~l~~~~-~~i 139 (349)
++.+.. .+|++++.||||+.....-. .. . ...++.+++.... ....|..+.... +.+
T Consensus 195 lq~~~a-~~P~i~~wDDHE~~nn~~~~~~~~~~~~~~f~~rr~~A~~ay~e~~P~~~~~~p~~~~~~~y~sf~~G~lv~~ 273 (527)
T 2yeq_A 195 LKAAHA-AFPWVVTWDDHEVENNYANKIPEKGQSVEAFVLRRAAAYQAYYEHMPLRISSLPNGPDMQLYRHFTYGNLASF 273 (527)
T ss_dssp HHHHHH-HSEEEECCCSTTTSTTCBTTBCSTTCCHHHHHHHHHHHHHHHHHHSCCCGGGCCBTTBCCCCEEEEETTTEEE
T ss_pred HHHHHh-cCCEEEecccccccCCCCCCcccccCCcccHHHHHHHHHHHHHHhCCCCcccCCCCCCceEEEEEEcCCcceE
Confidence 222222 58999999999997542110 00 0 0123333322111 111233444455 577
Q ss_pred EEeCCeeeecCCch-h----hhhhh---hhhccCCcchHHHHHHHHHHHhCCCCCCeEEEEeccCCCCCCCCCCCCCCCC
Q 018902 140 SIVGGRPFSCGGQQ-I----FRKRL---LSVRYGVQDMDESAKRIYKVALGTPDDHLVILLAHNGPSGLGSEPNDICGKD 211 (349)
Q Consensus 140 ~~~g~~~~~~~g~~-~----~~~~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~Ilv~H~PP~~~g~~~~~~~~~d 211 (349)
.+++++.+...... . .+... .+...| .+|.+||.+.|.+. +.+++||++|.|.+...... +..
T Consensus 274 i~LDtR~yr~~~~~~~~~~~~~~~~~~~~~~~lG----~~Q~~WL~~~L~~s-~a~W~Iv~s~~p~~~~~~~~----g~~ 344 (527)
T 2yeq_A 274 NVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLG----KEQEQWLFNNLGSS-TAHWNVLAQQIFFAKWNFGT----SAS 344 (527)
T ss_dssp EECCSSSSCCCCGGGSSEECCCHHHHCTTCCSSC----HHHHHHHHHHHHHC-CSSEEEEECSSCCSCCCSSC----SSS
T ss_pred EEEeccccccccccccccccccccccCCcccccC----HHHHHHHHHHHhcC-CCCeEEEEeCCcccccccCC----Ccc
Confidence 77776543211100 0 00000 001112 35677888887764 35789999999765542110 110
Q ss_pred CCCCCCCC-CCHHHHHHHHHHHHhcCCCc--cEEEeCccCCCc
Q 018902 212 WGFGGGDH-GDPDLAQAISLLKETTKLCI--PLVVFGHMHKEL 251 (349)
Q Consensus 212 ~~~~~~~~-G~~~~~~al~~l~~~~~~~~--~lvl~GH~H~~~ 251 (349)
.......| |.+..++.|..++++. ++ .++|+||+|...
T Consensus 345 ~~~~~D~W~g~~~~R~~Ll~~l~~~--~v~n~vvLsGDvH~~~ 385 (527)
T 2yeq_A 345 PIYSMDSWDGYPAQRERVINFIKSK--NLNNVVVLTGDVHASW 385 (527)
T ss_dssp CCEETTSGGGSHHHHHHHHHHHHHT--TCCCEEEEECSSSSEE
T ss_pred cccCccchhccHHHHHHHHHHHHHh--CCCCEEEEEcchHHHh
Confidence 00011234 6677778888888854 46 599999999984
|
| >4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=7.9e-09 Score=103.10 Aligned_cols=67 Identities=25% Similarity=0.357 Sum_probs=48.6
Q ss_pred CCccEEEEEeCCCCCcC---------------------hHHHHHHhhCCCC-CEEEEcCCCCCCc--------HHHHHHH
Q 018902 36 ASVVRIVIVGDVHDDWD---------------------LQEDSKALQLLKP-DLVLFTGDFGNEN--------VEIVQSV 85 (349)
Q Consensus 36 ~~~mril~iSDlH~~~~---------------------~~~~~~~i~~~~p-D~vI~~GDl~~~~--------~~~l~~l 85 (349)
...++|++++|+|.... ...+++.+++..+ +++|.+||+++.. ...++.|
T Consensus 23 ~~~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l 102 (546)
T 4h2g_A 23 PWELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFM 102 (546)
T ss_dssp CEEEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHHHTTHHHHHHH
T ss_pred ceEEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCchhhhhhCChHHHHHH
Confidence 45699999999997432 1345666666566 5999999999853 3467777
Q ss_pred HcCCCCEEEEcCCCCCCc
Q 018902 86 AELEFPKAVILGNHDSWK 103 (349)
Q Consensus 86 ~~l~~Pi~~V~GNHD~~~ 103 (349)
+.++.. ++++||||+..
T Consensus 103 n~lg~d-~~~~GNHEfd~ 119 (546)
T 4h2g_A 103 NALRYD-AMALGNHEFDN 119 (546)
T ss_dssp HHHTCS-EEECCGGGGTT
T ss_pred HhcCCc-EEeccCccccc
Confidence 776655 67899999743
|
| >3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.90 E-value=1.8e-07 Score=87.68 Aligned_cols=66 Identities=23% Similarity=0.289 Sum_probs=45.4
Q ss_pred CccEEEEEeCCCCCcCh-----------------HHHHHHhhCCCCC-EEEEcCCCCCCcH-------------------
Q 018902 37 SVVRIVIVGDVHDDWDL-----------------QEDSKALQLLKPD-LVLFTGDFGNENV------------------- 79 (349)
Q Consensus 37 ~~mril~iSDlH~~~~~-----------------~~~~~~i~~~~pD-~vI~~GDl~~~~~------------------- 79 (349)
-.++|++++|+|+.... ..+++.+++..++ ++|.+||+++...
T Consensus 10 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~~~llld~GD~~qGs~~~~~~~~~~~~~g~~~g~~ 89 (341)
T 3gve_A 10 VHLSILATTDIHANMMDYDYYSDKETADFGLARTAQLIQKHREQNPNTLLVDNGDLIQGNPLGEYAVKYQKDDIISGTKT 89 (341)
T ss_dssp EEEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHHHHHHHHHHHHHHHHTSSC
T ss_pred eEEEEEEEeccCCCccCccccCCCccccCCHHHHHHHHHHHHhcCCCEEEEecCccCCCcHHHHHhhhcccccccccccc
Confidence 45899999999986421 3456666655565 6678999987531
Q ss_pred -HHHHHHHcCCCCEEEEcCCCCCCc
Q 018902 80 -EIVQSVAELEFPKAVILGNHDSWK 103 (349)
Q Consensus 80 -~~l~~l~~l~~Pi~~V~GNHD~~~ 103 (349)
..++.++.++.- ++++||||+..
T Consensus 90 ~~~~~~ln~lg~D-a~tlGNHEfd~ 113 (341)
T 3gve_A 90 HPIISVMNALKYD-AGTLGNHEFNY 113 (341)
T ss_dssp CHHHHHHHHTTCC-BEECCGGGGTT
T ss_pred cHHHHHHHhhCCC-eeeccchhhcc
Confidence 245566666654 46789999764
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=98.85 E-value=1.1e-08 Score=100.34 Aligned_cols=66 Identities=21% Similarity=0.316 Sum_probs=47.7
Q ss_pred CccEEEEEeCCCCCcCh-HHHHHHhhCCC-CCEEEEcCCCCCCc---HHHHHHHHcC----CCCEEEEcCCCCCC
Q 018902 37 SVVRIVIVGDVHDDWDL-QEDSKALQLLK-PDLVLFTGDFGNEN---VEIVQSVAEL----EFPKAVILGNHDSW 102 (349)
Q Consensus 37 ~~mril~iSDlH~~~~~-~~~~~~i~~~~-pD~vI~~GDl~~~~---~~~l~~l~~l----~~Pi~~V~GNHD~~ 102 (349)
..||++++||+|++... .++++.+.... .|.+|++||++|+. .+++..|..+ +..+++|.||||..
T Consensus 211 ~~~~~~vigDiHG~~~~l~~~l~~~~~~~~~~~~v~lGD~vdrG~~s~e~~~~l~~l~~~~~~~~~~lrGNHE~~ 285 (477)
T 1wao_1 211 ETEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETD 285 (477)
T ss_dssp SSCEEEEECBCTTCHHHHHHHHHHHCCCBTTBCEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSH
T ss_pred CCcceEEEeCCCCCHHHHHHHHHHcCCCCCcCeEEEeccccCCCcchHHHHHHHHHHHhhCCCceEeecCCccHH
Confidence 46899999999998653 45555554333 35699999999964 4555544332 66799999999964
|
| >3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.84 E-value=5.5e-07 Score=84.27 Aligned_cols=66 Identities=17% Similarity=0.176 Sum_probs=46.4
Q ss_pred CccEEEEEeCCCCCcCh-----------------HHHHHHhhCCCCC-EEEEcCCCCCCcH----------------HHH
Q 018902 37 SVVRIVIVGDVHDDWDL-----------------QEDSKALQLLKPD-LVLFTGDFGNENV----------------EIV 82 (349)
Q Consensus 37 ~~mril~iSDlH~~~~~-----------------~~~~~~i~~~~pD-~vI~~GDl~~~~~----------------~~l 82 (349)
-.++|++++|+|+.... ..+++.+++..++ ++|.+||+++... ..+
T Consensus 7 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~n~llld~GD~~qGs~~~~~~~~~~~~~g~~~p~~ 86 (339)
T 3jyf_A 7 VDLRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEVKNSVLVDNGDVIQGSPLGDYMAAKGLKEGDVHPVY 86 (339)
T ss_dssp EEEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHTCSCEEEEECSCCSSSSHHHHHHHHHCCCTTCCCHHH
T ss_pred eeEEEEEEeeCCCCcccccccCCCccccCCHHHHHHHHHHHHhhCCCEEEEECCCCCCCchhHHhhhhcccccccchHHH
Confidence 45899999999985421 3466777766666 7789999987531 345
Q ss_pred HHHHcCCCCEEEEcCCCCCCc
Q 018902 83 QSVAELEFPKAVILGNHDSWK 103 (349)
Q Consensus 83 ~~l~~l~~Pi~~V~GNHD~~~ 103 (349)
+.++.++.- ++++||||+..
T Consensus 87 ~~mn~lg~D-~~t~GNHEfd~ 106 (339)
T 3jyf_A 87 KAMNTLNYA-VGNLGNHEFNY 106 (339)
T ss_dssp HHHTTSCCS-EEECCGGGGTT
T ss_pred HHHHhcCCC-EEecchhhhhc
Confidence 666666654 55789999753
|
| >3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.78 E-value=2.3e-07 Score=92.52 Aligned_cols=67 Identities=16% Similarity=0.278 Sum_probs=45.8
Q ss_pred CCccEEEEEeCCCCCcC--------------hHHHHHHhh----CCCCC-EEEEcCCCCCCc----------HHHHHHHH
Q 018902 36 ASVVRIVIVGDVHDDWD--------------LQEDSKALQ----LLKPD-LVLFTGDFGNEN----------VEIVQSVA 86 (349)
Q Consensus 36 ~~~mril~iSDlH~~~~--------------~~~~~~~i~----~~~pD-~vI~~GDl~~~~----------~~~l~~l~ 86 (349)
...++|++++|+|+... ..++...++ +..+| ++|.+||+++.. ...++.|+
T Consensus 13 ~~~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~~~~~~g~~~~~~ln 92 (557)
T 3c9f_A 13 WNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIFI 92 (557)
T ss_dssp CCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHHT
T ss_pred ceEEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchhhcccCCHHHHHHHH
Confidence 35699999999999632 123333333 35788 579999998752 23566777
Q ss_pred cCCCCEEEEcCCCCCCc
Q 018902 87 ELEFPKAVILGNHDSWK 103 (349)
Q Consensus 87 ~l~~Pi~~V~GNHD~~~ 103 (349)
.++.- ++++||||+..
T Consensus 93 ~lg~D-a~tlGNHEfD~ 108 (557)
T 3c9f_A 93 KQDYD-LLTIGNHELYL 108 (557)
T ss_dssp TSCCS-EECCCGGGSSS
T ss_pred hcCCC-EEeecchhccc
Confidence 76655 56789999864
|
| >2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* | Back alignment and structure |
|---|
Probab=98.69 E-value=9e-08 Score=88.32 Aligned_cols=69 Identities=25% Similarity=0.316 Sum_probs=50.7
Q ss_pred CCccEEEEEeCCCCCcCh-HHHHHHhhCCCCCEEEEcCCCCCCc---HHHHHHHHcC----CCCEEEEcCCCCCCcc
Q 018902 36 ASVVRIVIVGDVHDDWDL-QEDSKALQLLKPDLVLFTGDFGNEN---VEIVQSVAEL----EFPKAVILGNHDSWKT 104 (349)
Q Consensus 36 ~~~mril~iSDlH~~~~~-~~~~~~i~~~~pD~vI~~GDl~~~~---~~~l~~l~~l----~~Pi~~V~GNHD~~~~ 104 (349)
.-.++++++||+|++... .++++.+.....|.+|++||++|+. .+.++.|..+ +..++++.||||....
T Consensus 47 ~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l 123 (309)
T 2ie4_C 47 EVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQI 123 (309)
T ss_dssp EECSSEEEECCCTTCHHHHHHHHHHHCCTTTSCEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSTTG
T ss_pred eccCCEEEEecCCCCHHHHHHHHHHcCCCCCCEEEEeCCccCCCCChHHHHHHHHHHHhhCCCcEEEEeCCCCHHHH
Confidence 344789999999998754 5566666556678899999999963 4455544433 4569999999998654
|
| >2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=98.64 E-value=1.2e-08 Score=93.15 Aligned_cols=64 Identities=25% Similarity=0.411 Sum_probs=50.4
Q ss_pred cEEEEEeCCCCCcCh-HHHHHHhhC-CCCCEEEEcCCCCCC---cHHHHHHHHcCCCCEEEEcCCCCCC
Q 018902 39 VRIVIVGDVHDDWDL-QEDSKALQL-LKPDLVLFTGDFGNE---NVEIVQSVAELEFPKAVILGNHDSW 102 (349)
Q Consensus 39 mril~iSDlH~~~~~-~~~~~~i~~-~~pD~vI~~GDl~~~---~~~~l~~l~~l~~Pi~~V~GNHD~~ 102 (349)
||++++||+|++... .++++.+.. .++|.+|++||++|+ ..++++.+.+++.++++|.||||..
T Consensus 1 M~i~vigDiHG~~~~l~~ll~~~~~~~~~d~~v~lGD~vdrG~~s~~~l~~l~~l~~~~~~v~GNHe~~ 69 (280)
T 2dfj_A 1 MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPGSLDVLRYVKSLGDSVRLVLGNHDLH 69 (280)
T ss_dssp -CEEEECCCCSCHHHHHHHHHHTTCCTTTCEEEECSCCSSSSSCHHHHHHHHHHTGGGEEECCCHHHHH
T ss_pred CeEEEEecCCCCHHHHHHHHHHhCCCCCCCEEEEeCCcCCCCCccHHHHHHHHhCCCceEEEECCCcHH
Confidence 789999999998653 556666654 478999999999985 3567777777666899999999964
|
| >1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=98.63 E-value=1.1e-06 Score=79.63 Aligned_cols=67 Identities=16% Similarity=0.311 Sum_probs=45.8
Q ss_pred CccEEEEEeCCCCCcCh---HHHHHHhhCC-CCCEEEEcCCCCC-C---cHHHHHHHHcCCCCEEEEcCCCCCCcc
Q 018902 37 SVVRIVIVGDVHDDWDL---QEDSKALQLL-KPDLVLFTGDFGN-E---NVEIVQSVAELEFPKAVILGNHDSWKT 104 (349)
Q Consensus 37 ~~mril~iSDlH~~~~~---~~~~~~i~~~-~pD~vI~~GDl~~-~---~~~~l~~l~~l~~Pi~~V~GNHD~~~~ 104 (349)
..|||+++||+|+..-. ...++.+++. ++|++|.-||-.. . .....+.|..++.- .+..|||++...
T Consensus 3 ~~m~ilf~GDv~G~~G~~~l~~~l~~lr~~~~~d~vi~Ngen~~gG~g~~~~~~~~ln~~G~D-a~TlGNHefD~g 77 (281)
T 1t71_A 3 NSIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGKGLSLKHYEFLKEAGVN-YITMGNHTWFQK 77 (281)
T ss_dssp CCCEEEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTTTSSCCHHHHHHHHHHTCC-EEECCTTTTCCG
T ss_pred ceEEEEEECCcCChHHHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCcCHHHHHHHHhcCCC-EEEEccCcccCC
Confidence 45999999999975322 2234555433 6899999888653 2 35677777776665 455699998654
|
| >1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=98.54 E-value=1e-05 Score=72.34 Aligned_cols=226 Identities=15% Similarity=0.101 Sum_probs=115.6
Q ss_pred cEEEEEeCCCCCcCh---HHHHHHhhCCCCCEEEEcCCCC-CC---cHHHHHHHHcCCCCEEEEcCCCCCCccccccccc
Q 018902 39 VRIVIVGDVHDDWDL---QEDSKALQLLKPDLVLFTGDFG-NE---NVEIVQSVAELEFPKAVILGNHDSWKTQEFSGKK 111 (349)
Q Consensus 39 mril~iSDlH~~~~~---~~~~~~i~~~~pD~vI~~GDl~-~~---~~~~l~~l~~l~~Pi~~V~GNHD~~~~~~~~~~~ 111 (349)
|||++++|+=+..-. ...++.+++.. |++|.-|+-. .. .....+.|..++.-++ ..|||++...
T Consensus 1 m~ilf~GDv~g~~G~~~~~~~l~~lr~~~-d~vi~nge~~~~G~g~~~~~~~~l~~~G~Da~-TlGNHefD~~------- 71 (255)
T 1t70_A 1 MRVLFIGDVFGQPGRRVLQNHLPTIRPQF-DFVIVNMENSAGGFGMHRDAARGALEAGAGCL-TLGNHAWHHK------- 71 (255)
T ss_dssp CEEEEECCBBHHHHHHHHHHHHHHHGGGC-SEEEEECTBTTTTSSCCHHHHHHHHHHTCSEE-ECCTTTTSST-------
T ss_pred CEEEEEeccCChHHHHHHHHHHHHHHhhC-CEEEECCCCccCCcCCCHHHHHHHHhCCCCEE-EeccccccCc-------
Confidence 799999999643222 44566666555 9888777754 32 3567777877776644 5599998632
Q ss_pred hhHHHHHHHHhC-------------CcceeeEEeecCCceEEEeCCeeeecCCchhhhhhhhhhccCCcchHHHHHHHHH
Q 018902 112 KDGVQLQLECLG-------------EEHVAYRRLDFPTLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMDESAKRIYK 178 (349)
Q Consensus 112 ~~~~~~~l~~~~-------------~~~~~~~~l~~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~ 178 (349)
.+...++... ....++..++..+.++.++|-.. .. + + ...++..+.++++.
T Consensus 72 --~l~~~l~~~~~~~~~~aN~~~~~~pg~g~~I~~~~G~kIgVigl~g-----~~-~----~---~~~~~p~~~~~~~v- 135 (255)
T 1t70_A 72 --DIYPMLSEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLG-----RV-F----M---EAVDNPFRTMDALL- 135 (255)
T ss_dssp --THHHHHHTTCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEEC-----CT-T----S---CCCSCHHHHHHHHT-
T ss_pred --hHHHHHhhCCCcEEEEeccCCCCCCCCCeEEEEECCEEEEEEEeec-----Cc-C----c---ccccCHHHHHHHHH-
Confidence 1223332221 00113344455555555554321 10 0 0 01222222233333
Q ss_pred HHhCCCCCCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCccEEEeCccCCCcccCCcce
Q 018902 179 VALGTPDDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKELAYGNGLR 258 (349)
Q Consensus 179 ~l~~~~~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~~~~~g~~ 258 (349)
+++ ..+..|+.+|... ..+- +++...+ .-++|+|+.||+|.... ..
T Consensus 136 --~~l-~~d~IIv~~H~e~-----------------------t~Ek-~~la~~~---dg~vd~VvGgHTHv~~~----d~ 181 (255)
T 1t70_A 136 --ERD-DLGTVFVDFHAEA-----------------------TSEK-EAMGWHL---AGRVAAVIGTHTHVPTA----DT 181 (255)
T ss_dssp --TCS-SCCEEEEEEECSC-----------------------HHHH-HHHHHHH---TTSSSEEEEESSCSCBS----CC
T ss_pred --HHh-CCCEEEEEeCCCC-----------------------hHHH-HHHHHhC---CCCeEEEEeCCCCcCCC----ce
Confidence 333 4467899999632 0121 2334333 22599999999999842 22
Q ss_pred EEEEEcCCceEEEe----ecccceeeccCCccCCCCCccccc-ccccCCCCCCceeeEEEEEEeCCeEeEEEEEe
Q 018902 259 KMIVVGADSTIYLN----GAIVPRVKRLIDEQGADSSSVSNK-TSFLRPDSKGTVRAFTVVEILDGRIDKIAERW 328 (349)
Q Consensus 259 ~~~~~~~~gt~yvn----~g~~pr~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~f~~v~i~~~~v~~~~~~~ 328 (349)
++ -++||.|++ +|+.+.+--.....-+..+ +++. .||.+. .+...-+-++|+++.|+.+.+++.-
T Consensus 182 ~i---l~~gt~~i~d~G~~G~y~sviG~~~~~~~~k~-l~~~~~~f~~~-~~~~~~~g~~~~~d~g~~~~i~~i~ 251 (255)
T 1t70_A 182 RI---LKGGTAYQTDAGFTGPHDSIIGSAIEGPLQRF-LTERPHRYGVA-EGRAELNGVALHFEGGKATAAERYR 251 (255)
T ss_dssp EE---ETTTEEEESCCCCBEESSSBTTBCSHHHHHHH-HHCSCCCCCBC-CSCEEEEEEEEEEETTEEEEEEEEE
T ss_pred EE---cCCCeEEEEcCcccccCcceecCcchHHHHHH-HhCCCcceecC-CCceEEEEEEEEecCCcEEEEEEEe
Confidence 22 126788876 3443322110000000001 1111 344333 2333347788899988877666553
|
| >4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.50 E-value=3.4e-06 Score=83.73 Aligned_cols=65 Identities=26% Similarity=0.409 Sum_probs=45.1
Q ss_pred ccEEEEEeCCCCCcC---------------------hHHHHHHhhCCCCC-EEEEcCCCCCCc--------HHHHHHHHc
Q 018902 38 VVRIVIVGDVHDDWD---------------------LQEDSKALQLLKPD-LVLFTGDFGNEN--------VEIVQSVAE 87 (349)
Q Consensus 38 ~mril~iSDlH~~~~---------------------~~~~~~~i~~~~pD-~vI~~GDl~~~~--------~~~l~~l~~ 87 (349)
.++|+|++|+|+... ....++.+++..++ ++|.+||+++.. ...++.++.
T Consensus 3 ~LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~n~llldaGD~~qGs~~~~~~~g~~~i~~mN~ 82 (530)
T 4h1s_A 3 ELTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFMNA 82 (530)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHHHHHHTTHHHHHHHHH
T ss_pred EEEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCcCeEEEEeCCcccchHHHHHhCChHHHHHHhc
Confidence 378999999997431 12345666655666 677899999753 346666776
Q ss_pred CCCCEEEEcCCCCCCc
Q 018902 88 LEFPKAVILGNHDSWK 103 (349)
Q Consensus 88 l~~Pi~~V~GNHD~~~ 103 (349)
++.- ++++||||+..
T Consensus 83 lgyD-a~~lGNHEFd~ 97 (530)
T 4h1s_A 83 LRYD-AMALGNHEFDN 97 (530)
T ss_dssp TTCC-EEECCGGGGTT
T ss_pred cCCC-EEEEchhhhcc
Confidence 6543 68999999754
|
| >2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A | Back alignment and structure |
|---|
Probab=98.47 E-value=1.9e-05 Score=70.39 Aligned_cols=226 Identities=17% Similarity=0.107 Sum_probs=116.5
Q ss_pred cEEEEEeCCCCCc--Ch-HHHHHHhhCCCCCEEEEcC-CCCCC---cHHHHHHHHcCCCCEEEEcCCCCCCccccccccc
Q 018902 39 VRIVIVGDVHDDW--DL-QEDSKALQLLKPDLVLFTG-DFGNE---NVEIVQSVAELEFPKAVILGNHDSWKTQEFSGKK 111 (349)
Q Consensus 39 mril~iSDlH~~~--~~-~~~~~~i~~~~pD~vI~~G-Dl~~~---~~~~l~~l~~l~~Pi~~V~GNHD~~~~~~~~~~~ 111 (349)
|||++++|+=+.. .. ...++.+++.. |++|+-| |.+.. .....+.|.+++.-++ ..|||++....
T Consensus 1 m~ilfiGDi~g~~G~~~v~~~l~~lr~~~-d~vi~ngen~~~G~g~~~~~~~~l~~~G~D~~-T~GNHefD~~~------ 72 (252)
T 2z06_A 1 MRVLFIGDVMAEPGLRAVGLHLPDIRDRY-DLVIANGENAARGKGLDRRSYRLLREAGVDLV-SLGNHAWDHKE------ 72 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHGGGC-SEEEEECTTTTTTSSCCHHHHHHHHHHTCCEE-ECCTTTTSCTT------
T ss_pred CEEEEEEecCCcccHHHHHHHHHHHHhhC-CEEEEeCCCccCCCCcCHHHHHHHHhCCCCEE-EeccEeeECch------
Confidence 7999999995533 22 55667776666 8766554 55443 3677777887777765 77999986421
Q ss_pred hhHHHHHHHHhC---C-------cceeeEEeecCCceEEEeCCeeeecCCchhhhhhhhhhccCCcchHHHHHHHHHHHh
Q 018902 112 KDGVQLQLECLG---E-------EHVAYRRLDFPTLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMDESAKRIYKVAL 181 (349)
Q Consensus 112 ~~~~~~~l~~~~---~-------~~~~~~~l~~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 181 (349)
+...++... . ....+..++..+.++.++|.. |.. + + ...++..+.++++.+.++
T Consensus 73 ---l~~~l~~~~~vrpaN~~~~~pg~~~~i~~~~G~kIgVi~l~-----g~~-~----~---~~~~~pf~~~~~~v~~lk 136 (252)
T 2z06_A 73 ---VYALLESEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVM-----GRI-F----M---DPLDDPFRALDRLLEEEK 136 (252)
T ss_dssp ---HHHHHHHSSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEE-----CCT-T----S---CCCCCHHHHHHHHHHHCC
T ss_pred ---HHHHhccCCceEeecCCCCCCCCCeEEEEECCEEEEEEEcc-----ccc-C----c---cccCCHHHHHHHHHHHhC
Confidence 222332210 0 011333344444554444321 110 0 0 012333333455555544
Q ss_pred CCCCCCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCccEEEeCccCCCcccCCcceEEE
Q 018902 182 GTPDDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKELAYGNGLRKMI 261 (349)
Q Consensus 182 ~~~~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~~~~~g~~~~~ 261 (349)
.+..|+++|... ..+ .+++...+. -++|+|+-||+|..... .++
T Consensus 137 ----~d~IIv~~H~g~-----------------------tse-k~~la~~~d---g~Vd~VvGgHTHv~t~d----~~i- 180 (252)
T 2z06_A 137 ----ADYVLVEVHAEA-----------------------TSE-KMALAHYLD---GRASAVLGTHTHVPTLD----ATR- 180 (252)
T ss_dssp ----CSEEEEEEECSC-----------------------HHH-HHHHHHHHB---TTBSEEEEESSCSCBSC----CEE-
T ss_pred ----CCEEEEEeCCCc-----------------------HHH-HHHHHHhCC---CCeEEEEcCCCCcCCCc----cEE-
Confidence 457899999731 011 123444332 25999999999998432 222
Q ss_pred EEcCCceEEEe----ecccceeeccCCccCCCCCcccc-cccccCCCCCCceeeEEEEEEeCCeEeEEEEEe
Q 018902 262 VVGADSTIYLN----GAIVPRVKRLIDEQGADSSSVSN-KTSFLRPDSKGTVRAFTVVEILDGRIDKIAERW 328 (349)
Q Consensus 262 ~~~~~gt~yvn----~g~~pr~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~f~~v~i~~~~v~~~~~~~ 328 (349)
-++||.|+. +|+.+.+--.....-+..+ +++ ..||.+. .+...-.-++|+++.|+.+.+++.-
T Consensus 181 --l~~gt~~itd~G~~G~y~sviG~~~~~~~~k~-l~~l~~~f~~~-~~~~~~~g~~~~~d~g~~~~i~~i~ 248 (252)
T 2z06_A 181 --LPKGTLYQTDVGMTGTYHSIIGGEVETFLARF-LTGRPQPFRAA-QGKARFHATELVFEGGRPVAISPYV 248 (252)
T ss_dssp --CTTSCEEESCCCCBEESSSBTTBCHHHHHHHH-HHCSCCCCCBC-CSCEEEEEEEEEEETTEEEEEEEEE
T ss_pred --cCCCcEeecCCcccccCceEEcCCCcchHHHh-hcCCceeEECC-CCceEEEEEEEEecCCcEEEEEEEE
Confidence 226778876 3443322110000000001 111 1344333 2333347788899988877666553
|
| >2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A | Back alignment and structure |
|---|
Probab=98.26 E-value=5.8e-07 Score=84.32 Aligned_cols=72 Identities=19% Similarity=0.323 Sum_probs=50.2
Q ss_pred CCCCCCccEEEEEeCCCCCcCh-HHHHHHhhC--------CCCCEEEEcCCCCCCc---HHHHHHHHc-------CCCCE
Q 018902 32 PAMSASVVRIVIVGDVHDDWDL-QEDSKALQL--------LKPDLVLFTGDFGNEN---VEIVQSVAE-------LEFPK 92 (349)
Q Consensus 32 ~~~~~~~mril~iSDlH~~~~~-~~~~~~i~~--------~~pD~vI~~GDl~~~~---~~~l~~l~~-------l~~Pi 92 (349)
+......||++++||+|++... .++++.+.. .++|.+|++||++|+. .++++.|.. .+.++
T Consensus 64 ~~~~~~~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~evl~~l~~l~~~~~~~~~~v 143 (342)
T 2z72_A 64 PDTYLGIKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNEVLWFMYQLDQQARDAGGMV 143 (342)
T ss_dssp CSEECCCCEEEEECCCTTCHHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred cceecCCCCEEEEECCCCCHHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHHHHHHHHHHHHHHHhhCCCeE
Confidence 4445567899999999998653 444554432 1579999999999853 344444433 34569
Q ss_pred EEEcCCCCCCc
Q 018902 93 AVILGNHDSWK 103 (349)
Q Consensus 93 ~~V~GNHD~~~ 103 (349)
++|.||||...
T Consensus 144 ~~v~GNHE~~~ 154 (342)
T 2z72_A 144 HLLMGNHEQMV 154 (342)
T ss_dssp EECCCHHHHHH
T ss_pred EEEecCCcHHH
Confidence 99999999743
|
| >1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=98.23 E-value=1e-06 Score=81.90 Aligned_cols=67 Identities=18% Similarity=0.184 Sum_probs=49.6
Q ss_pred CccEEEEEeCCCCCcCh-HHHHHHhhCCCCCEEEEcCCCCCCc---HHHHHHHHcC----CCCEEEEcCCCCCCc
Q 018902 37 SVVRIVIVGDVHDDWDL-QEDSKALQLLKPDLVLFTGDFGNEN---VEIVQSVAEL----EFPKAVILGNHDSWK 103 (349)
Q Consensus 37 ~~mril~iSDlH~~~~~-~~~~~~i~~~~pD~vI~~GDl~~~~---~~~l~~l~~l----~~Pi~~V~GNHD~~~ 103 (349)
-.+++.++||+|++... .++++.+.....|.+|++||++|+. .+.++.|..+ +..+++|.||||...
T Consensus 55 ~~~~i~viGDIHG~~~~L~~ll~~~g~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~ 129 (330)
T 1fjm_A 55 LEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECAS 129 (330)
T ss_dssp ECSSEEEECBCTTCHHHHHHHHHHHCSTTSSCEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHH
T ss_pred ecCceEEecCCCCCHHHHHHHHHHhCCCCcceEEeCCCcCCCCCChHHHHHHHHHhhhhcCCceEEecCCchHhh
Confidence 34689999999999754 5566666555678899999999963 4555544432 456999999999754
|
| >3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A | Back alignment and structure |
|---|
Probab=98.19 E-value=2.2e-06 Score=79.03 Aligned_cols=67 Identities=21% Similarity=0.312 Sum_probs=47.3
Q ss_pred CccEEEEEeCCCCCcCh-HHHHHHhhCCCC-CEEEEcCCCCCCc---HHHHHHHHcC----CCCEEEEcCCCCCCc
Q 018902 37 SVVRIVIVGDVHDDWDL-QEDSKALQLLKP-DLVLFTGDFGNEN---VEIVQSVAEL----EFPKAVILGNHDSWK 103 (349)
Q Consensus 37 ~~mril~iSDlH~~~~~-~~~~~~i~~~~p-D~vI~~GDl~~~~---~~~l~~l~~l----~~Pi~~V~GNHD~~~ 103 (349)
..+|++++||+|++... .++++.+..... +.+|++||++|+. .+.+..|..+ +..++.+.||||...
T Consensus 58 ~~~ri~viGDIHG~~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~ 133 (315)
T 3h63_A 58 ETEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDN 133 (315)
T ss_dssp TTCEEEEECCCTTCHHHHHHHHHHHCCCBTTBCEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHH
T ss_pred CCceEEEEecCCCCHHHHHHHHHHhCCCCCCCEEEEeCCccCCCcChHHHHHHHHHhhhhcCCcEEEEecCccccc
Confidence 46899999999999753 455555443333 4699999999963 4555444432 456999999999754
|
| >3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.09 E-value=4.2e-06 Score=77.73 Aligned_cols=67 Identities=25% Similarity=0.300 Sum_probs=47.9
Q ss_pred CccEEEEEeCCCCCcCh-HHHHHHhhCCCC-CEEEEcCCCCCCc---HHHHHHHHcC----CCCEEEEcCCCCCCc
Q 018902 37 SVVRIVIVGDVHDDWDL-QEDSKALQLLKP-DLVLFTGDFGNEN---VEIVQSVAEL----EFPKAVILGNHDSWK 103 (349)
Q Consensus 37 ~~mril~iSDlH~~~~~-~~~~~~i~~~~p-D~vI~~GDl~~~~---~~~l~~l~~l----~~Pi~~V~GNHD~~~ 103 (349)
+.||++++||+|++... .++++.+..... +.+|++||++|+. .+.+..|..+ +..++.+.||||...
T Consensus 62 ~~~ri~viGDIHG~~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~ 137 (335)
T 3icf_A 62 PDVKISVCGDTHGQFYDVLNLFRKFGKVGPKHTYLFNGDFVDRGSWSCEVALLFYCLKILHPNNFFLNRGNHESDN 137 (335)
T ss_dssp TTCEEEEECCCTTCHHHHHHHHHHHCCCBTTEEEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSHH
T ss_pred cCceEEEEecCCCCHHHHHHHHHHcCCCCCCcEEEEeCCccCCCcChHHHHHHHHHHhhhCCCcEEEecCchhhhh
Confidence 56899999999999764 556665544433 4699999999963 4444444332 456999999999643
|
| >3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* | Back alignment and structure |
|---|
Probab=98.05 E-value=3.1e-06 Score=77.45 Aligned_cols=66 Identities=18% Similarity=0.197 Sum_probs=48.4
Q ss_pred ccEEEEEeCCCCCcCh-HHHHHHhhCCCCCEEEEcCCCCCCc---HHHHHHHHc----CCCCEEEEcCCCCCCc
Q 018902 38 VVRIVIVGDVHDDWDL-QEDSKALQLLKPDLVLFTGDFGNEN---VEIVQSVAE----LEFPKAVILGNHDSWK 103 (349)
Q Consensus 38 ~mril~iSDlH~~~~~-~~~~~~i~~~~pD~vI~~GDl~~~~---~~~l~~l~~----l~~Pi~~V~GNHD~~~ 103 (349)
.++++++||+|++... .++++.+.....|.+|+.||++|+. .+.+..|.. .+..++.+.||||...
T Consensus 55 ~~~i~viGDIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDrG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~ 128 (299)
T 3e7a_A 55 EAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECAS 128 (299)
T ss_dssp CSSEEEECBCTTCHHHHHHHHHHHCSTTSSCEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHH
T ss_pred CCCEEEEecCCCCHHHHHHHHHHhCCCCCccEEeCCcccCCCCCcHHHHHHHHHHHhhCCCcEEEEecCchhhh
Confidence 4579999999999764 5566666555678899999999963 444444432 2556999999999753
|
| >3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A | Back alignment and structure |
|---|
Probab=97.98 E-value=5.2e-06 Score=77.51 Aligned_cols=66 Identities=20% Similarity=0.231 Sum_probs=48.3
Q ss_pred ccEEEEEeCCCCCcCh-HHHHHHhhCCCCCEEEEcCCCCCCc---HHHHHHHHcC----CCCEEEEcCCCCCCc
Q 018902 38 VVRIVIVGDVHDDWDL-QEDSKALQLLKPDLVLFTGDFGNEN---VEIVQSVAEL----EFPKAVILGNHDSWK 103 (349)
Q Consensus 38 ~mril~iSDlH~~~~~-~~~~~~i~~~~pD~vI~~GDl~~~~---~~~l~~l~~l----~~Pi~~V~GNHD~~~ 103 (349)
.++++++||+|++... .++++.......|.+|++||++|+. .+.+..|..+ +..++.+.||||...
T Consensus 69 ~~pi~ViGDIHG~~~dL~~ll~~~g~~~~~~~vfLGD~VDRG~~s~Evl~lL~~lk~~~p~~v~llrGNHE~~~ 142 (357)
T 3ll8_A 69 DAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRH 142 (357)
T ss_dssp CSSEEEECCCTTCHHHHHHHHHHHCCTTTCCEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSHH
T ss_pred cccceeeccCCCCHHHHHHHHHhcCCCCCcEEEECCCccCCCcChHHHHHHHHHhhhhcCCcEEEEeCchhhhh
Confidence 4579999999999753 5566655556678899999999963 4444444322 456999999999753
|
| >1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=97.89 E-value=8.7e-06 Score=79.19 Aligned_cols=68 Identities=19% Similarity=0.214 Sum_probs=47.9
Q ss_pred CCccEEEEEeCCCCCcCh-HHHHHHhhCCCCCEEEEcCCCCCCc---HHHHHHHHcC----CCCEEEEcCCCCCCc
Q 018902 36 ASVVRIVIVGDVHDDWDL-QEDSKALQLLKPDLVLFTGDFGNEN---VEIVQSVAEL----EFPKAVILGNHDSWK 103 (349)
Q Consensus 36 ~~~mril~iSDlH~~~~~-~~~~~~i~~~~pD~vI~~GDl~~~~---~~~l~~l~~l----~~Pi~~V~GNHD~~~ 103 (349)
.-.++++++||+|++... .++++.......|.+|++||++|+. .+++..|..+ +..++.|.||||...
T Consensus 80 ~l~~pI~VIGDIHGq~~dL~~LL~~~g~p~~d~yVFLGDyVDRGp~S~Evl~lL~aLk~~~P~~v~lLRGNHE~~~ 155 (521)
T 1aui_A 80 DIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRH 155 (521)
T ss_dssp EECSSEEEECCCTTCHHHHHHHHHHHCCTTTCCEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHH
T ss_pred eeccceeeccCCCCCHHHHHHHHHhcCCCCcceEEEcCCcCCCCCCHHHHHHHHHHHhhhCCCeEEEecCCccHHH
Confidence 334789999999999764 4455533334568899999999963 4444444332 456999999999753
|
| >3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.27 E-value=0.01 Score=57.24 Aligned_cols=67 Identities=15% Similarity=0.164 Sum_probs=45.2
Q ss_pred CCccEEEEEeCCCCCcCh-------HHHHHHhh-----------CCCCCEEEEcCCCCCCcH------------------
Q 018902 36 ASVVRIVIVGDVHDDWDL-------QEDSKALQ-----------LLKPDLVLFTGDFGNENV------------------ 79 (349)
Q Consensus 36 ~~~mril~iSDlH~~~~~-------~~~~~~i~-----------~~~pD~vI~~GDl~~~~~------------------ 79 (349)
.+.-+++++||+|.+... +.+++.+. ..++..+|++||+++...
T Consensus 198 ~~~~~ialVSGL~igs~~~~~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e~~~~~~y~~~~~~~ 277 (476)
T 3e0j_A 198 DTDRFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYLTKKTQA 277 (476)
T ss_dssp SSCCEEEEECCCCBTSSCHHHHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-------------CHHHHHH
T ss_pred CCCCEEEEECCcccCCCcccchHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccchhhhhhhccccccch
Confidence 455799999999998752 22344443 246889999999886310
Q ss_pred ---H-------HHHHHHcCCCCEEEEcCCCCCCc
Q 018902 80 ---E-------IVQSVAELEFPKAVILGNHDSWK 103 (349)
Q Consensus 80 ---~-------~l~~l~~l~~Pi~~V~GNHD~~~ 103 (349)
+ ++..|.. .+||.++|||||...
T Consensus 278 ~~~~~~~~ld~~L~~l~~-~i~V~lmPG~~DP~~ 310 (476)
T 3e0j_A 278 ASVEAVKMLDEILLQLSA-SVPVDVMPGEFDPTN 310 (476)
T ss_dssp HHHHHHHHHHHHHHHHHT-TSCEEEECCTTSSSC
T ss_pred hhHHHHHHHHHHHHhccc-CceEEecCCCCCccc
Confidence 1 2222222 689999999999754
|
| >3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=93.12 E-value=0.15 Score=49.00 Aligned_cols=68 Identities=16% Similarity=0.210 Sum_probs=49.0
Q ss_pred CCccEEEEEeCCCCCcCh------HHHHHHhhCC-CCCEEEEcCCCCCCc----------------------HHHHH---
Q 018902 36 ASVVRIVIVGDVHDDWDL------QEDSKALQLL-KPDLVLFTGDFGNEN----------------------VEIVQ--- 83 (349)
Q Consensus 36 ~~~mril~iSDlH~~~~~------~~~~~~i~~~-~pD~vI~~GDl~~~~----------------------~~~l~--- 83 (349)
..++++++.|..+..... .++++.++.. +||++|++|.++|.. .++.+
T Consensus 145 ~~~l~ivvAsGPyT~sdnl~yepL~~Ll~~v~~~~kPdvLIL~GPFvD~~hp~i~~G~~p~~~~~~~~~~t~~~lF~~~i 224 (460)
T 3flo_A 145 GSSLKVIVTCGPYFANDNFSLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQFKTQPKTLDELFLKLF 224 (460)
T ss_dssp SSCEEEEEEESCCSCSSCCCCHHHHHHHHHCCCCCCCSEEEEESCSSBTTCHHHHHTCCCCCTTCSSCCSSHHHHHHHHT
T ss_pred CCCcEEEEEeCCccCCCccChHHHHHHHHHHHhccCCCEEEEecCcccccCcccccCcccccccccccccCHHHHHHHHH
Confidence 367999999999986542 6678888775 899999999987521 12222
Q ss_pred --HHHcC--CCCEEEEcCCCCCCc
Q 018902 84 --SVAEL--EFPKAVILGNHDSWK 103 (349)
Q Consensus 84 --~l~~l--~~Pi~~V~GNHD~~~ 103 (349)
.+.++ .+.+++||||||...
T Consensus 225 ~~il~~l~~~t~VVlVPS~rD~~~ 248 (460)
T 3flo_A 225 TPILKTISPHIQTVLIPSTKDAIS 248 (460)
T ss_dssp HHHHTTSCTTSEEEEECCTTBTTC
T ss_pred HHHHHhccCCCEEEEeCCcccccC
Confidence 22333 356899999999863
|
| >2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=88.73 E-value=0.97 Score=35.11 Aligned_cols=68 Identities=18% Similarity=0.188 Sum_probs=51.1
Q ss_pred CCCCCCccEEEEEeCCCCCcC-------------------hHHHHHHhhCCCCCEEEEcCCCC--C-CcHHHHHHHHcCC
Q 018902 32 PAMSASVVRIVIVGDVHDDWD-------------------LQEDSKALQLLKPDLVLFTGDFG--N-ENVEIVQSVAELE 89 (349)
Q Consensus 32 ~~~~~~~mril~iSDlH~~~~-------------------~~~~~~~i~~~~pD~vI~~GDl~--~-~~~~~l~~l~~l~ 89 (349)
..|..+.|||+++=|-..... .++.++.++..+||+||. |+. + ...++++.+.+..
T Consensus 2 s~m~~r~~rILiVdD~~~~~~~l~~~L~~~G~~v~~~a~~g~eAl~~~~~~~~Dlvll--Di~mP~~~G~el~~~lr~~~ 79 (123)
T 2lpm_A 2 SHMTERRLRVLVVEDESMIAMLIEDTLCELGHEVAATASRMQEALDIARKGQFDIAII--DVNLDGEPSYPVADILAERN 79 (123)
T ss_dssp CCCCCCCCCEEEESSSTTTSHHHHHHHHHHCCCCCBCSCCHHHHHHHHHHCCSSEEEE--CSSSSSCCSHHHHHHHHHTC
T ss_pred CCCCCCCCEEEEEeCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCCCEEEE--ecCCCCCCHHHHHHHHHcCC
Confidence 467788899999999776321 255667777789999888 653 2 3578888888878
Q ss_pred CCEEEEcCCCCC
Q 018902 90 FPKAVILGNHDS 101 (349)
Q Consensus 90 ~Pi~~V~GNHD~ 101 (349)
+|++++-|+-|.
T Consensus 80 ipvI~lTa~~~~ 91 (123)
T 2lpm_A 80 VPFIFATGYGSK 91 (123)
T ss_dssp CSSCCBCTTCTT
T ss_pred CCEEEEecCccH
Confidence 999999997664
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 349 | ||||
| d1uf3a_ | 228 | d.159.1.6 (A:) Hypothetical protein TT1561 {Thermu | 2e-06 | |
| d1nnwa_ | 251 | d.159.1.5 (A:) Hypothetical protein PF1291 {Archae | 6e-05 | |
| d2yvta1 | 257 | d.159.1.6 (A:4-260) Uncharacterized protein Aq_195 | 0.002 | |
| d1su1a_ | 184 | d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia | 0.002 |
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} Length = 228 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Score = 46.2 bits (108), Expect = 2e-06
Identities = 11/76 (14%), Positives = 23/76 (30%), Gaps = 7/76 (9%)
Query: 34 MSASVVRIVIVGDVHDDWD-LQEDSKALQLLKPDLVLFTGDFGNENVEIVQSVAELEFPK 92
M +V I+ + D + L++ K D + G+ + + A
Sbjct: 1 MRRTVRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILS 60
Query: 93 A------VILGNHDSW 102
+ G D+
Sbjct: 61 EAHLPTAYVPGPQDAP 76
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Score = 41.6 bits (96), Expect = 6e-05
Identities = 28/215 (13%), Positives = 60/215 (27%), Gaps = 32/215 (14%)
Query: 39 VRIVIVGDVHDDWDLQE------DSKALQLLKPDLVLFTGDF---GNENVEIVQSVAELE 89
V + ++ ++ + + + + + G+ E+++ + +L
Sbjct: 1 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYPKEVIEVIKDLT 60
Query: 90 FPKAV--ILGNHDSW--------------KTQEFSGKKKDGVQLQLECLGEEHVAYRRLD 133
+ V I G +D E G K ++ E LG E Y R
Sbjct: 61 KKENVKIIRGKYDQIIAMSDPHATDPGYIDKLELPGHVKKALKFTWEKLGHEGREYLRDL 120
Query: 134 FPTLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMDESAKRIYKVALGTPDDHLVILLA 193
L I G F G + + + E Y+ + D+ ++++A
Sbjct: 121 PIYLVDKIGGNEVFGVYG-------SPINPFDGEVLAEQPTSYYEAIMRPVKDYEMLIVA 173
Query: 194 HNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAI 228
G + A+
Sbjct: 174 SPMYPVDAMTRYGRVVCPGSVGFPPGKEHKATFAL 208
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Score = 37.4 bits (85), Expect = 0.002
Identities = 23/244 (9%), Positives = 57/244 (23%), Gaps = 59/244 (24%)
Query: 39 VRIVIVGDVHDDWD-LQEDSKALQLLKPDLVLFTGDFGNENV------------------ 79
+++ + + + +D L + + +PD+++ G+
Sbjct: 3 RKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRK 62
Query: 80 --------------EIVQSVAELEFPKAVILGNHDSWKTQEFSGKKKDGVQLQLECLGEE 125
+ + + EL V+ G +D+ + E
Sbjct: 63 VIHENEHYIIETLDKFFREIGELGVKTFVVPGKNDAPLKIFL------RAAYEAETAYPN 116
Query: 126 HVAYRRLDFPTLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMDESAKRIYKVALGTPD 185
V G + +L + K
Sbjct: 117 IRVLHEGFAGWRGEFEVIGFGGLLTEHEFEEDFVLKYPRWYVEYILKFVNELKPR----- 171
Query: 186 DHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFG 245
++ + + P G + DP + + L + + G
Sbjct: 172 --RLVTIFYTPPIGEFVDRTP-------------EDPKHHGSAVVNTIIKSLNPEVAIVG 216
Query: 246 HMHK 249
H+ K
Sbjct: 217 HVGK 220
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} Length = 184 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Score = 36.5 bits (83), Expect = 0.002
Identities = 12/79 (15%), Positives = 26/79 (32%), Gaps = 12/79 (15%)
Query: 40 RIVIVGDVHDDWD-LQEDSKALQLLKPDLVLFTGDF-----------GNENVEIVQSVAE 87
+++ D+H + + ++ GD G ++V+ + E
Sbjct: 3 KLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNE 62
Query: 88 LEFPKAVILGNHDSWKTQE 106
+ + GN DS Q
Sbjct: 63 VAHKVIAVRGNCDSEVDQM 81
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 349 | |||
| d2yvta1 | 257 | Uncharacterized protein Aq_1956 {Aquifex aeolicus | 99.93 | |
| d1uf3a_ | 228 | Hypothetical protein TT1561 {Thermus thermophilus | 99.91 | |
| d3d03a1 | 271 | Glycerophosphodiesterase GpdQ {Enterobacter aeroge | 99.88 | |
| d2hy1a1 | 256 | Rv0805 cyclic nucleotide phosphodiesterase {Mycoba | 99.87 | |
| d1z2wa1 | 182 | Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus | 99.85 | |
| d1s3la_ | 165 | Putative phosphodiesterase MJ0936 {Methanococcus j | 99.83 | |
| d2nxfa1 | 320 | Uncharacterized C17orf48 homolog zgc:64213 {Zebraf | 99.8 | |
| d2a22a1 | 193 | Vacuolar protein sorting 29, VPS29 {Cryptosporidiu | 99.79 | |
| d2qfra2 | 312 | Plant purple acid phosphatase, catalytic domain {K | 99.78 | |
| d1utea_ | 302 | Mammalian purple acid phosphatase {Pig (Sus scrofa | 99.75 | |
| d1ii7a_ | 333 | Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 99.75 | |
| d3ck2a1 | 173 | Uncharacterized protein SP1879 {Streptococcus pneu | 99.73 | |
| d1su1a_ | 184 | Phosphodiesterase yfcE {Escherichia coli [TaxId: 5 | 99.71 | |
| d1nnwa_ | 251 | Hypothetical protein PF1291 {Archaeon Pyrococcus f | 99.69 | |
| d1xm7a_ | 188 | Hypothetical protein aq_1666 {Aquifex aeolicus [Ta | 99.37 | |
| d1usha2 | 337 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 99.22 | |
| d1g5ba_ | 219 | lambda ser/thr protein phosphatase {Bacteriophage | 99.08 | |
| d3c9fa2 | 322 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.75 | |
| d2z1aa2 | 302 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.64 | |
| d1s95a_ | 324 | Serine/threonine protein phosphatase 5, PP5 {Human | 97.1 | |
| d3c5wc1 | 288 | Protein phosphatase 2A catalytic subunit alpha iso | 96.98 | |
| d1jk7a_ | 294 | Protein phosphatase-1 (PP-1) {Human (Homo sapiens) | 96.94 | |
| d1auia_ | 473 | Protein phosphatase-2B (PP-2B, calcineurin A subun | 96.88 | |
| d2z06a1 | 252 | Hypothetical protein TTHA0625 {Thermus thermophilu | 96.58 | |
| d1t70a_ | 255 | Putative phosphatase DR1281 {Deinococcus radiodura | 96.51 | |
| d1t71a_ | 281 | Hypothetical protein MPN349 {Mycoplasma pneumoniae | 94.55 |
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Probab=99.93 E-value=1.2e-24 Score=193.04 Aligned_cols=214 Identities=13% Similarity=0.137 Sum_probs=128.8
Q ss_pred ccEEEEEeCCCCCcCh-HHHHHHhhCCCCCEEEEcCCCCCCc--------------------------------HHHHHH
Q 018902 38 VVRIVIVGDVHDDWDL-QEDSKALQLLKPDLVLFTGDFGNEN--------------------------------VEIVQS 84 (349)
Q Consensus 38 ~mril~iSDlH~~~~~-~~~~~~i~~~~pD~vI~~GDl~~~~--------------------------------~~~l~~ 84 (349)
+.||+++||+|..... +++++.+++.+||+||++|||++.. ..+++.
T Consensus 2 ~~ri~~isD~h~~~~~l~~l~~~~~~~~~D~vli~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~d~~~~~~~~~~ 81 (257)
T d2yvta1 2 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFFRE 81 (257)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHhhcCCCEEEEecccCCCCCCCHHHHHHHHhhhhhceeeeccccccchhhHHHHHHH
Confidence 4699999999988764 7788888889999999999999742 235667
Q ss_pred HHcCCCCEEEEcCCCCCCccccccccchhHHHHHHHHhCCc------ceeeEEeecCCceEEEeCCeeeecCCchhhhhh
Q 018902 85 VAELEFPKAVILGNHDSWKTQEFSGKKKDGVQLQLECLGEE------HVAYRRLDFPTLKLSIVGGRPFSCGGQQIFRKR 158 (349)
Q Consensus 85 l~~l~~Pi~~V~GNHD~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~~~l~~~~~~i~~~g~~~~~~~g~~~~~~~ 158 (349)
|.++++|+++|+||||...... ....+...... ...+. .......+.++++........
T Consensus 82 L~~~~~pv~~i~GNHD~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~------ 146 (257)
T d2yvta1 82 IGELGVKTFVVPGKNDAPLKIF--------LRAAYEAETAYPNIRVLHEGFA-GWRGEFEVIGFGGLLTEHEFE------ 146 (257)
T ss_dssp HHTTCSEEEEECCTTSCCHHHH--------HHHHHHTTTTCTTEEECSSEEE-EETTTEEEEEECSEEESSCCB------
T ss_pred HHhcCCcEEEEeCCCcchhhHH--------HHHhccccccccccccccceeE-EecCCeEEEEeccccCCcccc------
Confidence 7788999999999999753211 11111111100 01111 112334444444421110000
Q ss_pred hhhhccCCcchHHHHHHHHHHHhCCCCCCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCC-CCHHHHHHHHHHHHhcCC
Q 018902 159 LLSVRYGVQDMDESAKRIYKVALGTPDDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDH-GDPDLAQAISLLKETTKL 237 (349)
Q Consensus 159 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~-G~~~~~~al~~l~~~~~~ 237 (349)
........+...+.........+..++|+++|+||.+... ++....... |+ ..+.++++ ++
T Consensus 147 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~~H~pp~~~~~--------~~~~~~~~~~g~----~~l~~~l~--~~ 208 (257)
T d2yvta1 147 ----EDFVLKYPRWYVEYILKFVNELKPRRLVTIFYTPPIGEFV--------DRTPEDPKHHGS----AVVNTIIK--SL 208 (257)
T ss_dssp ----SSSSCEEEHHHHHHHGGGGGGSCCCEEEEEESSCCSCSST--------TCBTTBSCCCSC----HHHHHHHH--HH
T ss_pred ----chhhhhhhhhHHHHHHHHhhhcccccEEEEEccccccccc--------cccccchhhhhh----HHHHHhhh--hc
Confidence 0111111111222223333334567899999999976522 222212223 66 44555555 34
Q ss_pred CccEEEeCccCCCcccCCcceEEEEEcCCceEEEeecccceeeccCCccCCCCCcccccccccCCCCCCceeeEEEEEEe
Q 018902 238 CIPLVVFGHMHKELAYGNGLRKMIVVGADSTIYLNGAIVPRVKRLIDEQGADSSSVSNKTSFLRPDSKGTVRAFTVVEIL 317 (349)
Q Consensus 238 ~~~lvl~GH~H~~~~~~~g~~~~~~~~~~gt~yvn~g~~pr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~v~i~ 317 (349)
++++++|||+|.+. .+. +++.++|+|+..+ .+|+++++.
T Consensus 209 ~~~~~~~GHiH~~~------~~~-----g~~~~~~pGs~~~------------------------------g~y~~id~~ 247 (257)
T d2yvta1 209 NPEVAIVGHVGKGH------ELV-----GNTIVVNPGEFEE------------------------------GRYAFLDLT 247 (257)
T ss_dssp CCSEEEECSSCCEE------EEE-----TTEEEEECCBGGG------------------------------TEEEEEETT
T ss_pred CCcEEEEEeecCCe------Eec-----CCeEEEECCcccc------------------------------CEEEEEEEe
Confidence 69999999999862 244 7899999997522 469999999
Q ss_pred CCeEeEEE
Q 018902 318 DGRIDKIA 325 (349)
Q Consensus 318 ~~~v~~~~ 325 (349)
+++++..+
T Consensus 248 ~~~i~~~~ 255 (257)
T d2yvta1 248 QHKIKLEQ 255 (257)
T ss_dssp TTEEEEEE
T ss_pred CCEEEEEE
Confidence 99998754
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Probab=99.91 E-value=5.2e-24 Score=185.76 Aligned_cols=214 Identities=14% Similarity=0.145 Sum_probs=130.0
Q ss_pred CccEEEEEeCCCCCcCh-HHHHHHhhCCCCCEEEEcCCCCCCc------HHHHHHHHcCCCCEEEEcCCCCCCccccccc
Q 018902 37 SVVRIVIVGDVHDDWDL-QEDSKALQLLKPDLVLFTGDFGNEN------VEIVQSVAELEFPKAVILGNHDSWKTQEFSG 109 (349)
Q Consensus 37 ~~mril~iSDlH~~~~~-~~~~~~i~~~~pD~vI~~GDl~~~~------~~~l~~l~~l~~Pi~~V~GNHD~~~~~~~~~ 109 (349)
.+.+|+++||+|++... +++++.++..++|+||++|||++.. ..+++.|.++++|+++|+||||.+......
T Consensus 4 ~~~~i~~~sd~hg~~eale~~~~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~~~L~~~~~pv~~i~GNHD~~~~~~~~- 82 (228)
T d1uf3a_ 4 TVRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEAHLPTAYVPGPQDAPIWEYLR- 82 (228)
T ss_dssp CCCEEEEEECCTTCHHHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGGCSCEEEECCTTSCSHHHHHH-
T ss_pred cccEEEEEeCCCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCccchHHHHhhhhhccccceEEEEecCCCchhhhhhh-
Confidence 45789999999999876 7788888888999999999999742 346677888899999999999975432110
Q ss_pred cchhHHHHHHHHh--CCcceeeEEeecCCceEEEeCCeeeecCCchhhhhhhhhhccCCcchHHHHHHHHHHHhCCCCCC
Q 018902 110 KKKDGVQLQLECL--GEEHVAYRRLDFPTLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMDESAKRIYKVALGTPDDH 187 (349)
Q Consensus 110 ~~~~~~~~~l~~~--~~~~~~~~~l~~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 187 (349)
.......... ......+ ........+..+++......... .........++..++.+.+... ...
T Consensus 83 ---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l~~~l~~~-~~~ 149 (228)
T d1uf3a_ 83 ---EAANVELVHPEMRNVHETF-TFWRGPYLVAGVGGEIADEGEPE--------EHEALRYPAWVAEYRLKALWEL-KDY 149 (228)
T ss_dssp ---HHHHHHHHCTTEEECBTSE-EEETTTEEEEEECSEEESSSCCB--------SSSSCEEEHHHHHHHHGGGGGS-CSC
T ss_pred ---hhcccccccccccccceee-eeccCCEEEEecCCccccCcCcc--------hhhhhhhhHHHHHHHHHHHhhc-cCC
Confidence 0011111000 0011111 12223344444444322111110 0111222333445555544443 345
Q ss_pred eEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCccEEEeCccCCCcccCCcceEEEEEcCCc
Q 018902 188 LVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKELAYGNGLRKMIVVGADS 267 (349)
Q Consensus 188 ~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~~~~~g~~~~~~~~~~g 267 (349)
+.|+++|+||.+.... ..|+ ..+.++++ +.++++++|||+|... ... ++
T Consensus 150 ~~il~~H~p~~~~~~~--------------~~~~----~~~~~~~~--~~~~~lvl~GH~H~~~------~~~-----g~ 198 (228)
T d1uf3a_ 150 PKIFLFHTMPYHKGLN--------------EQGS----HEVAHLIK--THNPLLVLVAGKGQKH------EML-----GA 198 (228)
T ss_dssp CEEEEESSCBCBTTTB--------------TTSB----HHHHHHHH--HHCCSEEEECCSSCEE------EEE-----TT
T ss_pred ceEEEEeeeccCcccc--------------cccc----HHHHHHHH--hcCCcEEEEcccccch------hcc-----CC
Confidence 7899999998654111 1245 34455555 3469999999999761 234 78
Q ss_pred eEEEeecccceeeccCCccCCCCCcccccccccCCCCCCceeeEEEEEEeCCeEeEEE
Q 018902 268 TIYLNGAIVPRVKRLIDEQGADSSSVSNKTSFLRPDSKGTVRAFTVVEILDGRIDKIA 325 (349)
Q Consensus 268 t~yvn~g~~pr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~v~i~~~~v~~~~ 325 (349)
+.++|+|++.+ ..|++|+++++++....
T Consensus 199 ~~~v~pG~~~~------------------------------g~y~~i~~~~~~ie~~~ 226 (228)
T d1uf3a_ 199 SWVVVPGDLSE------------------------------GEYSLLDLRARKLETGN 226 (228)
T ss_dssp EEEEECCBGGG------------------------------TEEEEEETTTTEEEEEE
T ss_pred EEEEECCcccc------------------------------ceEEEEEccCCEEEEEe
Confidence 89999998632 35999999999887643
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Probab=99.88 E-value=1.2e-21 Score=176.77 Aligned_cols=224 Identities=17% Similarity=0.143 Sum_probs=126.9
Q ss_pred cEEEEEeCCCCCcC-------------hHHHHHHhhC--CCCCEEEEcCCCCCCc-----HHHHHHHHcCCCCEEEEcCC
Q 018902 39 VRIVIVGDVHDDWD-------------LQEDSKALQL--LKPDLVLFTGDFGNEN-----VEIVQSVAELEFPKAVILGN 98 (349)
Q Consensus 39 mril~iSDlH~~~~-------------~~~~~~~i~~--~~pD~vI~~GDl~~~~-----~~~l~~l~~l~~Pi~~V~GN 98 (349)
|||+||||+|++.. .++.++.++. .+||+||++|||++.. ..+.+.|.++++|+++|+||
T Consensus 1 M~i~hiSD~Hl~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~D~vv~~GDl~~~~~~~~y~~~~~~l~~l~~p~~~i~GN 80 (271)
T d3d03a1 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGRPEEYQVARQILGSLNYPLYLIPGN 80 (271)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCCHHHHHHHHHHHTTCSSCEEEECCT
T ss_pred CEEEEEecCcCCCCccccccCcCHHHHHHHHHHHHHhcCCCCCEEEECcccCcCCcchhHHHHHHHHhccCCCEEEEecC
Confidence 89999999997432 1445666664 4899999999999852 23566777889999999999
Q ss_pred CCCCccccccccchhHHHHHHHHh----CC-cceeeEEeecCCceEEEeCCeeeecCCchhhhhhhhhhccCCcchHHHH
Q 018902 99 HDSWKTQEFSGKKKDGVQLQLECL----GE-EHVAYRRLDFPTLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMDESA 173 (349)
Q Consensus 99 HD~~~~~~~~~~~~~~~~~~l~~~----~~-~~~~~~~l~~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 173 (349)
||.... +.+.+... .. ........+.....+..+++....... ... -.+++
T Consensus 81 HD~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ldt~~~~~~~----------~~l----~~~ql 136 (271)
T d3d03a1 81 HDDKAL----------FLEYLQPLCPQLGSDANNMRCAVDDFATRLLFIDSSRAGTSK----------GWL----TDETI 136 (271)
T ss_dssp TSCHHH----------HHHHHGGGSGGGCSCGGGCCEEECSSSSEEEECCCCCTTCSS----------BCC----CHHHH
T ss_pred ccchHH----------HHHHhhhhhhccccccCcceEEEecCCeEEEecccccCCCCc----------cee----cHHHH
Confidence 996321 22222211 11 111111223344455444432110000 011 12445
Q ss_pred HHHHHHHhCCCCCCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCccEEEeCccCCCccc
Q 018902 174 KRIYKVALGTPDDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKELAY 253 (349)
Q Consensus 174 ~~l~~~l~~~~~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~~~ 253 (349)
+|+.+.+++.+ +++.||++||||+..+....+. ....+. +.+.++++++ .++++++|||+|....
T Consensus 137 ~wL~~~L~~~~-~~~~iv~~Hh~p~~~~~~~~d~--------~~~~~~----~~l~~~l~~~-~~v~~vl~GH~H~~~~- 201 (271)
T d3d03a1 137 SWLEAQLFEGG-DKPATIFMHHPPLPLGNAQMDP--------IACENG----HRLLALVERF-PSLTRIFCGHNHSLTM- 201 (271)
T ss_dssp HHHHHHHHHHT-TSCEEEEESSCSSCCSCTTTGG--------GSBTTT----HHHHHHHHHC-TTEEEEEECSSSSCEE-
T ss_pred HHHHHHHhhhc-cceeEEEeccCccccCcccccc--------ccccch----HHHHHHHHhc-CCeEEEEeCCcchhhc-
Confidence 67777776543 4678999999997664332111 111122 3455566643 2699999999998732
Q ss_pred CCcceEEEEEcCCceEE-EeecccceeeccCCccCCCCCcccccccccCCCCCCceeeEEEEEEeCCeEeEE
Q 018902 254 GNGLRKMIVVGADSTIY-LNGAIVPRVKRLIDEQGADSSSVSNKTSFLRPDSKGTVRAFTVVEILDGRIDKI 324 (349)
Q Consensus 254 ~~g~~~~~~~~~~gt~y-vn~g~~pr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~v~i~~~~v~~~ 324 (349)
.+. +|+.+ +.++...++....... .|.-..++.+|.+....+++++..
T Consensus 202 ----~~~-----~g~~~~~~pst~~~~~~~~~~~--------------~~~~~~~p~~~~~~~~~~~~~~~~ 250 (271)
T d3d03a1 202 ----TQY-----RQALISTLPGTVHQVPYCHADT--------------DPYYDLSPASCLMHRQVGEQWVSY 250 (271)
T ss_dssp ----EEE-----TTEEEEECCCSSCBCCCCSSCC--------------SCEEBCCCCEEEEEEEETTEEEEE
T ss_pred ----eEE-----CCEEEEEcCCceeecccCCCCC--------------CcccccCCCEEEEEEEeCCCEEEE
Confidence 122 45554 4445544433222110 000013567899999988887554
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.87 E-value=1.1e-21 Score=175.29 Aligned_cols=222 Identities=16% Similarity=0.141 Sum_probs=117.7
Q ss_pred CccEEEEEeCCCCCcC-------------hHHHHHHhhC--CCCCEEEEcCCCCCCc--------HHHHHHH-HcCCCCE
Q 018902 37 SVVRIVIVGDVHDDWD-------------LQEDSKALQL--LKPDLVLFTGDFGNEN--------VEIVQSV-AELEFPK 92 (349)
Q Consensus 37 ~~mril~iSDlH~~~~-------------~~~~~~~i~~--~~pD~vI~~GDl~~~~--------~~~l~~l-~~l~~Pi 92 (349)
..|||+||||+|+... .+++++.+++ .+||+||++|||++.. .++++.+ .++++|+
T Consensus 3 ~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~pD~vl~~GDl~~~g~~~~~~~~~~~l~~~~~~~~~p~ 82 (256)
T d2hy1a1 3 PDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQLGAEL 82 (256)
T ss_dssp CSEEEEEECCCCBC----------CHHHHHHHHHHHHHHHTCCCSEEEECSCCBSSCCHHHHHHHHHHHHHHHHHHTCEE
T ss_pred CCEEEEEEeeCccCCCCcccccCcCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCChhHHHHHHHHhhhhhhhcCCCE
Confidence 3699999999998432 1345566553 5899999999999752 1223322 3458999
Q ss_pred EEEcCCCCCCccccccccchhHHHHHHHHhCCcc-eeeEEeecCCceEEEeCCeeeecCCchhhhhhhhhhccCCcchHH
Q 018902 93 AVILGNHDSWKTQEFSGKKKDGVQLQLECLGEEH-VAYRRLDFPTLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMDE 171 (349)
Q Consensus 93 ~~V~GNHD~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~l~~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 171 (349)
++|+||||... .+.+.+....... .........+..+..++.... +. ..+. .-.+
T Consensus 83 ~~v~GNHD~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ldt~~~---~~----------~~g~-~~~~ 138 (256)
T d2hy1a1 83 VWVMGNHDDRA----------ELRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVP---GH----------HHGE-IRAS 138 (256)
T ss_dssp EECCCTTSCHH----------HHHHHTTCCCCCCSCCCEEEEETTEEEEECCCBCT---TC----------SSBC-CCHH
T ss_pred EEEcccccchh----------hhhhhhccccccccccceEEEecccceeeeeeeec---CC----------cCCc-ccHH
Confidence 99999999421 1222221111110 011122233444443332110 00 0111 1134
Q ss_pred HHHHHHHHHhCCCCCCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCccEEEeCccCCCc
Q 018902 172 SAKRIYKVALGTPDDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKEL 251 (349)
Q Consensus 172 ~~~~l~~~l~~~~~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~ 251 (349)
+++|+.+.+.+.+ ++++||++|+||+..+....+.+ ...+ .+.+.++++ ++++++++|||+|...
T Consensus 139 ~~~wl~~~L~~~~-~~~~iv~~Hhpp~~~~~~~~~~~---------~~~~---~~~~~~i~~--~~~v~~~~~GH~H~~~ 203 (256)
T d2hy1a1 139 QLGWLAEELATPA-PDGTILALHHPPIPSVLDMAVTV---------ELRD---QAALGRVLR--GTDVRAILAGHLHYST 203 (256)
T ss_dssp HHHHHHHHHTSCC-TTCEEEECSSCSSCCSSHHHHTT---------SBCC---HHHHHHHHT--TSSEEEEEECSSSSCE
T ss_pred HHHHHHHHHHhhh-ccCceeeeecCCccccccccccc---------cccc---HHHHHHHHh--ccCceEEEccccchhh
Confidence 5677878776654 56789999999976532211110 0111 255677777 5679999999999873
Q ss_pred ccCCcceEEEEEcCCceEEEeeccc-ceee--ccCCccCCCCCcccccccccCCCCCCceeeEEEEEEeCCeEeE
Q 018902 252 AYGNGLRKMIVVGADSTIYLNGAIV-PRVK--RLIDEQGADSSSVSNKTSFLRPDSKGTVRAFTVVEILDGRIDK 323 (349)
Q Consensus 252 ~~~~g~~~~~~~~~~gt~yvn~g~~-pr~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~v~i~~~~v~~ 323 (349)
. ... +|+.|+++++. .... ...++ .+ ......+|.+|++.++.++.
T Consensus 204 ~-----~~~-----~gi~~~~~~s~~~~~~~~~~~~~-----------~~-----~~~~~~g~~lv~v~~d~~~~ 252 (256)
T d2hy1a1 204 N-----ATF-----VGIPVSVASATCYTQDLTVAAGG-----------TR-----GRDGAQGCNLVHVYPDTVVH 252 (256)
T ss_dssp E-----EEE-----TTEEEEECCCCC-----------------------------------CEEEEEECSSCEEE
T ss_pred c-----eEE-----CCEEEEEcCCccccccccCCCCC-----------cc-----cccCCCCEEEEEEECCCEEE
Confidence 1 122 46666655442 1111 01100 00 01345789999998777655
|
| >d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.85 E-value=1.7e-20 Score=159.26 Aligned_cols=174 Identities=20% Similarity=0.253 Sum_probs=114.3
Q ss_pred cEEEEEeCCCCCcCh----HHHHHHhhCCCCCEEEEcCCCCCCcHHHHHHHHcCCCCEEEEcCCCCCCccccccccchhH
Q 018902 39 VRIVIVGDVHDDWDL----QEDSKALQLLKPDLVLFTGDFGNENVEIVQSVAELEFPKAVILGNHDSWKTQEFSGKKKDG 114 (349)
Q Consensus 39 mril~iSDlH~~~~~----~~~~~~i~~~~pD~vI~~GDl~~~~~~~l~~l~~l~~Pi~~V~GNHD~~~~~~~~~~~~~~ 114 (349)
|||+++||+|++... ..+.+.++..++|.||++||++. .+.++.|.++..|+++|.||||.....
T Consensus 1 MkI~viSD~H~~~~~~~l~~~~~~~~~~~~~D~Ii~~GDi~~--~e~l~~l~~~~~~v~~V~GN~D~~~~~--------- 69 (182)
T d1z2wa1 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCT--KESYDYLKTLAGDVHIVRGDFDENLNY--------- 69 (182)
T ss_dssp CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBS--HHHHHHHHHHCSEEEECCCTTCCCTTS---------
T ss_pred CEEEEEeecCCCCcchhhHHHHHHHhcccCCCEEEEccCccc--hhhHHHHHhhCCceEEEeCCcCccccc---------
Confidence 899999999986542 33444455668999999999986 567777777677899999999964210
Q ss_pred HHHHHHHhCCcceeeEEeecCCceEEEeCCeeeecCCchhhhhhhhhhccCCcchHHHHHHHHHHHhCCCCCCeEEEEec
Q 018902 115 VQLQLECLGEEHVAYRRLDFPTLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMDESAKRIYKVALGTPDDHLVILLAH 194 (349)
Q Consensus 115 ~~~~l~~~~~~~~~~~~l~~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~Ilv~H 194 (349)
+.... +.. ...+|+++|
T Consensus 70 --------------------p~~~~-------~~~------------------------------------~g~~i~~~H 86 (182)
T d1z2wa1 70 --------------------PEQKV-------VTV------------------------------------GQFKIGLIH 86 (182)
T ss_dssp --------------------CSEEE-------EEE------------------------------------TTEEEEEEC
T ss_pred --------------------ceEEE-------EEE------------------------------------cCcEEEEEe
Confidence 00000 111 124789999
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCccEEEeCccCCCcccCCcceEEEEEcCCceEEEeec
Q 018902 195 NGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKELAYGNGLRKMIVVGADSTIYLNGA 274 (349)
Q Consensus 195 ~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~~~~~g~~~~~~~~~~gt~yvn~g 274 (349)
..++.. ++.+ +.+..+.+. .++|++++||+|.+ ...+. ++++++|||
T Consensus 87 g~~~~~------------------~~~~---~~l~~~~~~--~~~divi~GHTH~p-----~~~~~-----~~~~~iNPG 133 (182)
T d1z2wa1 87 GHQVIP------------------WGDM---ASLALLQRQ--FDVDILISGHTHKF-----EAFEH-----ENKFYINPG 133 (182)
T ss_dssp SCCCCB------------------TTCH---HHHHHHHHH--HSSSEEECCSSCCC-----EEEEE-----TTEEEEECC
T ss_pred CCCCCC------------------CCCH---HHHHHHHhc--cCCCEEEECCcCcc-----eEEEE-----CCEEEEeCC
Confidence 865332 1122 334445443 35999999999998 33344 799999999
Q ss_pred cc--ceeeccCCccCCCCCcccccccccCCCCCCceeeEEEEEEeCCeEeEEEEEeeeecCCcceeEEEeeecc
Q 018902 275 IV--PRVKRLIDEQGADSSSVSNKTSFLRPDSKGTVRAFTVVEILDGRIDKIAERWIIVVGDTTTLQEEHILFK 346 (349)
Q Consensus 275 ~~--pr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~v~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (349)
++ ||-.... ....+|+++++++++++........ .++..+.+-|+
T Consensus 134 Sv~~pr~~~~~----------------------~~~~syaild~~~~~v~~~~~~l~~-----~~v~~~~~~~~ 180 (182)
T d1z2wa1 134 SATGAYNALET----------------------NIIPSFVLMDIQASTVVTYVYQLIG-----DDVKVERIEYK 180 (182)
T ss_dssp CTTCCCCSSCS----------------------CCCCEEEEEEEETTEEEEEEEEEET-----TEEEEEEEEEE
T ss_pred CCCCCCCCCCC----------------------CCCCEEEEEEEeCCEEEEEEEEecC-----CcEEEEEEEEE
Confidence 96 4432111 2346899999999999886544422 34445554454
|
| >d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Putative phosphodiesterase MJ0936 species: Methanococcus jannaschii [TaxId: 2190]
Probab=99.83 E-value=5.3e-20 Score=153.78 Aligned_cols=62 Identities=21% Similarity=0.292 Sum_probs=53.9
Q ss_pred cEEEEEeCCCCCcCh-HHHHHHhhCCCCCEEEEcCCCCCCcHHHHHHHHcCCCCEEEEcCCCCCC
Q 018902 39 VRIVIVGDVHDDWDL-QEDSKALQLLKPDLVLFTGDFGNENVEIVQSVAELEFPKAVILGNHDSW 102 (349)
Q Consensus 39 mril~iSDlH~~~~~-~~~~~~i~~~~pD~vI~~GDl~~~~~~~l~~l~~l~~Pi~~V~GNHD~~ 102 (349)
|||+++||+|++... ++.++.++..++|.|+++||++.. ..++.+.++..|+++|.||||..
T Consensus 1 MkI~iiSDiHgn~~al~~vl~~~~~~~~D~ii~~GD~~~~--~~~~~l~~~~~~~~~v~GN~D~~ 63 (165)
T d1s3la_ 1 MKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSL--FVIKEFENLNANIIATYGNNDGE 63 (165)
T ss_dssp CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCST--HHHHHGGGCSSEEEEECCTTCCC
T ss_pred CEEEEEEeCCCCHHHHHHHHHHHHhcCCCEEEECCCccCH--HHHHHHhhcCccEEEEccccccc
Confidence 899999999998664 677888888899999999999974 55777888888999999999975
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Probab=99.80 E-value=2.1e-19 Score=162.45 Aligned_cols=239 Identities=12% Similarity=0.116 Sum_probs=127.2
Q ss_pred cEEEEEeCCCCCcC--------------------hHHHHHHhhCCCCCEEEEcCCCCCCc-----------HHHHHHHHc
Q 018902 39 VRIVIVGDVHDDWD--------------------LQEDSKALQLLKPDLVLFTGDFGNEN-----------VEIVQSVAE 87 (349)
Q Consensus 39 mril~iSDlH~~~~--------------------~~~~~~~i~~~~pD~vI~~GDl~~~~-----------~~~l~~l~~ 87 (349)
|||+++||+|.+.. .++.++.++..+||+||++||+++.. ..+.+.+..
T Consensus 4 f~f~~isD~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~i~~~~~DfVv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~ 83 (320)
T d2nxfa1 4 FTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAELDA 83 (320)
T ss_dssp EEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHHHHT
T ss_pred EEEEEEecCCCCCCCCccccccccchhhHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCcchhHHHHHHHHHHHHHHH
Confidence 89999999997521 14456777789999999999999742 235666777
Q ss_pred CCCCEEEEcCCCCCCcccccc--c---cchhHHH-HHH-HHhCCcceeeEEeecCCceEEEeCCeeeecCCch----hhh
Q 018902 88 LEFPKAVILGNHDSWKTQEFS--G---KKKDGVQ-LQL-ECLGEEHVAYRRLDFPTLKLSIVGGRPFSCGGQQ----IFR 156 (349)
Q Consensus 88 l~~Pi~~V~GNHD~~~~~~~~--~---~~~~~~~-~~l-~~~~~~~~~~~~l~~~~~~i~~~g~~~~~~~g~~----~~~ 156 (349)
+++|+++++||||........ . ....... ... ...+...............+..+.+..+...+.. ...
T Consensus 84 ~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (320)
T d2nxfa1 84 CSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEKHT 163 (320)
T ss_dssp TCSEEEECCCHHHHHHCCHHHHHTSTTCCCC------CEECGGGTCCCEEEEEETTEEEEECCTTSBCSSSSCTTSHHHH
T ss_pred cCCCEEEecccCccccccchhcccccccchhhhcccccccccCCCCccceeecCCCeEEEEecCcccccccccccccccc
Confidence 899999999999974321000 0 0000000 000 0001111111122223333332222111111100 000
Q ss_pred hh------------------------hhhhccCCcchHHHHHHHHHHHhCC-CCCCeEEEEeccCCCCCCCCCCCCCCCC
Q 018902 157 KR------------------------LLSVRYGVQDMDESAKRIYKVALGT-PDDHLVILLAHNGPSGLGSEPNDICGKD 211 (349)
Q Consensus 157 ~~------------------------~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~Ilv~H~PP~~~g~~~~~~~~~d 211 (349)
.. .........-..++++|+.+.+++. ...++.|+++|+|+.........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~~viv~~H~p~~~~~~~~~~----- 238 (320)
T d2nxfa1 164 HSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERVLIFSHLPVHPCAADPIC----- 238 (320)
T ss_dssp HHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHHTCEEEEEESSCCCTTSSCGGG-----
T ss_pred cccceeeecccccceecccccccccccccccccccccHHHHHHHHHHHHhhhhcCCceEEEECCCCccCCCCCcc-----
Confidence 00 0000001111245677777777653 23467899999987544221100
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCCccEEEeCccCCCcccCCcceEEEEEcCCceEEEeecccceeeccCCccCCCCC
Q 018902 212 WGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKELAYGNGLRKMIVVGADSTIYLNGAIVPRVKRLIDEQGADSS 291 (349)
Q Consensus 212 ~~~~~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~~~~~g~~~~~~~~~~gt~yvn~g~~pr~~~~~~~~~~~~~ 291 (349)
.. .+ .+++.+++++.+ +++++++||+|... .....+|..|++.++.-..
T Consensus 239 ------~~--~~-~~~~~~~l~~~~-~V~~v~~GH~H~~~---------~~~~~~g~~~i~~~~~~~~------------ 287 (320)
T d2nxfa1 239 ------LA--WN-HEAVLSVLRSHQ-SVLCFIAGHDHDGG---------RCTDSSGAQHITLEGVIET------------ 287 (320)
T ss_dssp ------SC--TT-HHHHHHHHHTCT-TEEEEEECSCTTCE---------EEECTTSCEEEECCCGGGC------------
T ss_pred ------ch--hh-HHHHHHHHHhCC-CeeEEEeCCcCCcC---------eeeccCCCEEEECCeeecC------------
Confidence 00 01 245666776332 59999999999872 1223367888887653111
Q ss_pred cccccccccCCCCCCceeeEEEEEEeCCeEeEEEE
Q 018902 292 SVSNKTSFLRPDSKGTVRAFTVVEILDGRIDKIAE 326 (349)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~f~~v~i~~~~v~~~~~ 326 (349)
..+..+|.+|+|.++++++...
T Consensus 288 -------------~~~~~~~~~~~v~~d~~~~~~~ 309 (320)
T d2nxfa1 288 -------------PPHSHAFATAYLYEDRMVMKGR 309 (320)
T ss_dssp -------------CTTSCEEEEEEECSSEEEEEEE
T ss_pred -------------CCCCCCEEEEEEECCEEEEEEe
Confidence 1345789999999999877543
|
| >d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Cryptosporidium parvum [TaxId: 5807]
Probab=99.79 E-value=1.7e-18 Score=148.24 Aligned_cols=165 Identities=18% Similarity=0.230 Sum_probs=107.0
Q ss_pred EEEEeCCCCCcCh----HHHHHHhhCCCCCEEEEcCCCCCCcHHHHHHHHcCCCCEEEEcCCCCCCccccccccchhHHH
Q 018902 41 IVIVGDVHDDWDL----QEDSKALQLLKPDLVLFTGDFGNENVEIVQSVAELEFPKAVILGNHDSWKTQEFSGKKKDGVQ 116 (349)
Q Consensus 41 il~iSDlH~~~~~----~~~~~~i~~~~pD~vI~~GDl~~~~~~~l~~l~~l~~Pi~~V~GNHD~~~~~~~~~~~~~~~~ 116 (349)
|++|||+|+.... +.+.+.+...++|.||++||+++ .+.++.|.++..++++|+||||......... +
T Consensus 6 IlviSD~H~~~~~~~l~~~~~~~~~~~~vD~ii~~GDi~~--~~~l~~l~~l~~~v~~V~GN~D~~~~~~~~~-----~- 77 (193)
T d2a22a1 6 VLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVCS--QEYVEMLKNITKNVYIVSGDLDSAIFNPDPE-----S- 77 (193)
T ss_dssp EEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCCC--HHHHHHHHHHCSCEEECCCTTCCSCCBCCGG-----G-
T ss_pred EEEEeCCCCCcccchhhHHHHHHhccCCCCEEEECCCCCC--HHHHHHHHhhCCCEEEEcCCCCcchhhhhHH-----H-
Confidence 8999999985433 34555566789999999999987 4677777776778999999999754321000 0
Q ss_pred HHHHHhCCcceeeEEeecCCceEEEeCCeeeecCCchhhhhhhhhhccCCcchHHHHHHHHHHHhCCCCCCeEEEEeccC
Q 018902 117 LQLECLGEEHVAYRRLDFPTLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMDESAKRIYKVALGTPDDHLVILLAHNG 196 (349)
Q Consensus 117 ~~l~~~~~~~~~~~~l~~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~Ilv~H~P 196 (349)
.. ..+.... +.+ +..+|+++|..
T Consensus 78 -----~~---------~lp~~~~-------~~~------------------------------------~~~~i~l~H~~ 100 (193)
T d2a22a1 78 -----NG---------VFPEYVV-------VQI------------------------------------GEFKIGLMHGN 100 (193)
T ss_dssp -----TB---------CCCSEEE-------EEE------------------------------------TTEEEEEECST
T ss_pred -----Hh---------hCCccEE-------EEE------------------------------------CCEEEEEEecc
Confidence 00 0000000 111 13478999865
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCccEEEeCccCCCcccCCcceEEEEEcCCceEEEeeccc
Q 018902 197 PSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKELAYGNGLRKMIVVGADSTIYLNGAIV 276 (349)
Q Consensus 197 P~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~~~~~~g~~~~~~~~~~gt~yvn~g~~ 276 (349)
+... ++++ +.+.+++++ .++|++++||+|.+ ...+. ++++++|||++
T Consensus 101 ~~~~------------------~~~~---~~l~~~~~~--~~~dvvi~GHTH~~-----~~~~~-----~g~~~iNPGSv 147 (193)
T d2a22a1 101 QVLP------------------WDDP---GSLEQWQRR--LDCDILVTGHTHKL-----RVFEK-----NGKLFLNPGTA 147 (193)
T ss_dssp TSSS------------------TTCH---HHHHHHHHH--HTCSEEEECSSCCC-----EEEEE-----TTEEEEECCCS
T ss_pred CCCC------------------CCCH---HHHHHHHhh--cCCCEEEEcCccCc-----eEEEE-----CCEEEEECCCC
Confidence 3221 1123 344555553 35999999999998 33344 79999999996
Q ss_pred --ceeeccCCccCCCCCcccccccccCCCCCCceeeEEEEEEeCCeEeEEE
Q 018902 277 --PRVKRLIDEQGADSSSVSNKTSFLRPDSKGTVRAFTVVEILDGRIDKIA 325 (349)
Q Consensus 277 --pr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~v~i~~~~v~~~~ 325 (349)
||-.... ....+|+++++++++++.+.
T Consensus 148 g~pr~~~~~----------------------~~~~syaild~~~~~v~v~~ 176 (193)
T d2a22a1 148 TGAFSALTP----------------------DAPPSFMLMALQGNKVVLYV 176 (193)
T ss_dssp SCCCCTTST----------------------TCCCEEEEEEEETTEEEEEE
T ss_pred CcCcCCCCC----------------------CCCCEEEEEEEECCEEEEEE
Confidence 4422111 33469999999999998865
|
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.78 E-value=4.4e-18 Score=156.35 Aligned_cols=207 Identities=14% Similarity=0.074 Sum_probs=117.2
Q ss_pred CCCCccEEEEEeCCCCCcChHHHHHH--hhCCCCCEEEEcCCCCC--C-----c---HHHHHHHHc--CCCCEEEEcCCC
Q 018902 34 MSASVVRIVIVGDVHDDWDLQEDSKA--LQLLKPDLVLFTGDFGN--E-----N---VEIVQSVAE--LEFPKAVILGNH 99 (349)
Q Consensus 34 ~~~~~mril~iSDlH~~~~~~~~~~~--i~~~~pD~vI~~GDl~~--~-----~---~~~l~~l~~--l~~Pi~~V~GNH 99 (349)
.+..++||+++||++......+.+.. +...+||+||++||++- . . .++.+.+.. ..+|+++++|||
T Consensus 3 g~~~p~~F~v~GD~g~~~~~~~~~~~~~~~~~~pdfvl~~GDl~Y~~~~~~~~~~~wd~~~~~~~~~~~~~P~~~~~GNH 82 (312)
T d2qfra2 3 GLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNH 82 (312)
T ss_dssp CSSCCEEEEEECSCCSBHHHHHHHHHHHHCSSCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSCEEECCCGG
T ss_pred CCCCCEEEEEEeeCCCCCchHHHHHHHHHcCCCCCEEEECCCCCcCCCCcccchHHHHHHHHHHHHHhhcceEEEecccc
Confidence 34568999999999876554444433 34678999999999962 1 1 123333332 268999999999
Q ss_pred CCCccccccccchhHHHHHHHHhCCcc-------eeeEEeecCCceEEEeCCeeeecCCchhhhhhhhhhccCCcchHHH
Q 018902 100 DSWKTQEFSGKKKDGVQLQLECLGEEH-------VAYRRLDFPTLKLSIVGGRPFSCGGQQIFRKRLLSVRYGVQDMDES 172 (349)
Q Consensus 100 D~~~~~~~~~~~~~~~~~~l~~~~~~~-------~~~~~l~~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 172 (349)
|......... ...+......+.... -.+..++...+.+.+++.. .......++
T Consensus 83 D~~~~~~~~~--~~~~~~~~~~f~~P~~~~~~~~~~~Ysf~~g~v~fi~Lds~------------------~~~~~~~~Q 142 (312)
T d2qfra2 83 EIEFAPEINE--TEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSY------------------SAYGRGTPQ 142 (312)
T ss_dssp GTCCBGGGTB--CSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTT------------------SCCSTTSHH
T ss_pred cccccccccc--cccccchhhhccCCccccCCCCCceEEEEECCEEEEEeecc------------------ccccchHHH
Confidence 9754321111 011122222211100 0011223344444433321 001112245
Q ss_pred HHHHHHHHhCCCC--CCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCccEEEeCccCCC
Q 018902 173 AKRIYKVALGTPD--DHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLVVFGHMHKE 250 (349)
Q Consensus 173 ~~~l~~~l~~~~~--~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lvl~GH~H~~ 250 (349)
.+||.+.|+..++ .+++|++.|+|++..+... ......+++++..+++ ++++|++|+||.|..
T Consensus 143 ~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~-------------~~~~~~~r~~l~~l~~--~~~Vdlv~~GH~H~Y 207 (312)
T d2qfra2 143 YTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHH-------------FMEGEAMRTKFEAWFV--KYKVDVVFAGHVHAY 207 (312)
T ss_dssp HHHHHHHHHTCCTTTCCEEEEECSSCSSCCBSTT-------------TTTTHHHHHHHHHHHH--HTTCSEEEECSSSSE
T ss_pred HHHHHHHHHHHhhcCCCEEEEEccccccccCCCC-------------cccchhHHHHHHHHHH--HcCcEEEEEccCcce
Confidence 6888888887643 3358999999987652211 1112456788888988 567999999999998
Q ss_pred cccC----------CcceEEEEEcCCceEEEeeccc
Q 018902 251 LAYG----------NGLRKMIVVGADSTIYLNGAIV 276 (349)
Q Consensus 251 ~~~~----------~g~~~~~~~~~~gt~yvn~g~~ 276 (349)
.+.. .+... ...++.|++||..|..
T Consensus 208 eRt~p~~~~~~~~~~~~~~-~~~~~~g~vyiv~G~g 242 (312)
T d2qfra2 208 ERSERVSNIAYKITNGLCT-PVKDQSAPVYITIGDA 242 (312)
T ss_dssp EEECSEECCCCCSSSCCCS-CEECTTSCEEEEECCS
T ss_pred EEEeeccCCcccccCCccc-cccCCCcCEEEEECcC
Confidence 5421 01000 0224568888888764
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.75 E-value=2.4e-18 Score=155.87 Aligned_cols=266 Identities=13% Similarity=0.092 Sum_probs=136.0
Q ss_pred CccEEEEEeCCCCCcCh-----------HHHHHHhhCCCCCEEEEcCCCCCC-------cHHHHHHH-------HcCCCC
Q 018902 37 SVVRIVIVGDVHDDWDL-----------QEDSKALQLLKPDLVLFTGDFGNE-------NVEIVQSV-------AELEFP 91 (349)
Q Consensus 37 ~~mril~iSDlH~~~~~-----------~~~~~~i~~~~pD~vI~~GDl~~~-------~~~~l~~l-------~~l~~P 91 (349)
.++||+++||+|..... ..+.+.+++.+||+||++||++.. ..++.+.+ ....+|
T Consensus 3 ~~~~F~vigD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfvl~~GD~vy~~g~~~~~~~~~~~~~~~~~~~~~~~~~P 82 (302)
T d1utea_ 3 PILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNVP 82 (302)
T ss_dssp CCEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTTCC
T ss_pred CCeEEEEEecCCCCCCcccccHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCCCcccHHHHHHHHHHHhhhhhhcCCc
Confidence 46899999999986432 234555566799999999998721 12233322 233789
Q ss_pred EEEEcCCCCCCccccccccchhHHHHHHHHhC------CcceeeEEe---ecCCceEEEeCCeeeecCCchhhhhhhhhh
Q 018902 92 KAVILGNHDSWKTQEFSGKKKDGVQLQLECLG------EEHVAYRRL---DFPTLKLSIVGGRPFSCGGQQIFRKRLLSV 162 (349)
Q Consensus 92 i~~V~GNHD~~~~~~~~~~~~~~~~~~l~~~~------~~~~~~~~l---~~~~~~i~~~g~~~~~~~g~~~~~~~~~~~ 162 (349)
+++++||||+..... ....+.... ......... ....+.+..++...+... ...+.......
T Consensus 83 ~~~~~GNHD~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ldt~~~~~~-~~~~~~~~~~~ 153 (302)
T d1utea_ 83 WHVLAGNHDHLGNVS--------AQIAYSKISKRWNFPSPYYRLRFKIPRSNVSVAIFMLDTVTLCGN-SDDFVSQQPER 153 (302)
T ss_dssp EEECCCHHHHHSCHH--------HHHHGGGTSTTEECCSSSEEEEEECTTSSCEEEEEECCHHHHHCC-GGGSTTCSCCS
T ss_pred eEEeecccccccccc--------cccchhhccccccCCCcccceeecccCCCCcEEEEEccceeEeec-ccccccccccc
Confidence 999999999653311 000011110 111111100 001122222221100000 00000000000
Q ss_pred ccCCcchHHHHHHHHHHHhCCCCCCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCccEE
Q 018902 163 RYGVQDMDESAKRIYKVALGTPDDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKETTKLCIPLV 242 (349)
Q Consensus 163 ~~~~~~~~~~~~~l~~~l~~~~~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~~~~~~~~lv 242 (349)
........++++|+.+.|++.. .+++|+++|+|++..... .........+..+++ +++++++
T Consensus 154 ~~~~~~~~~Q~~WL~~~L~~~~-~~~~iv~~h~~~~~~~~~---------------~~~~~~~~~~~~ll~--~~~v~~~ 215 (302)
T d1utea_ 154 PRNLALARTQLAWIKKQLAAAK-EDYVLVAGHYPVWSIAEH---------------GPTHCLVKQLLPLLT--THKVTAY 215 (302)
T ss_dssp CSCHHHHHHHHHHHHHHHHHCC-CSEEEEECSSCSSCCSSS---------------CCCHHHHHHTHHHHH--HTTCSEE
T ss_pred cccchhHHHHHHHHHHHHHhhc-cCceEEEEeccccccCCC---------------CCchhhhhhhhHHHH--hcCceEE
Confidence 0111123467788888888754 567899999998654211 123566778888888 4579999
Q ss_pred EeCccCCCcccCCcceEEEEEcCCceEEEeecccceeeccCCccCCCCCcccccccccCCCCCCceeeEEEEEEeCCeEe
Q 018902 243 VFGHMHKELAYGNGLRKMIVVGADSTIYLNGAIVPRVKRLIDEQGADSSSVSNKTSFLRPDSKGTVRAFTVVEILDGRID 322 (349)
Q Consensus 243 l~GH~H~~~~~~~g~~~~~~~~~~gt~yvn~g~~pr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~v~i~~~~v~ 322 (349)
++||.|...+. ...+++.|+.+|+.-........ . ...-....++.. .......+|.+|+|++++++
T Consensus 216 ~~GH~H~~~r~---------~~~~~~~~i~~g~g~~~~~~~~~--~-~~~~~~~~~~~~-~~~~~~~gf~~~~v~~~~l~ 282 (302)
T d1utea_ 216 LCGHDHNLQYL---------QDENGLGFVLSGAGNFMDPSKKH--L-RKVPNGYLRFHF-GAENSLGGFAYVEITPKEMS 282 (302)
T ss_dssp EECSSSSEEEE---------ECTTCCEEEEECBSSCCCCCCTT--G-GGSCTTCEEEEE-CCTTSCCEEEEEEECSSCEE
T ss_pred EeCCCcceEEE---------ecCCccEEEEeCCCCCCCCCccc--c-ccCCCcccceee-cccCCcceEEEEEEECCEEE
Confidence 99999987321 12356667665543111000000 0 000000001100 00123458999999998887
Q ss_pred EEEEEeeeecCCcceeEEEeeeccCC
Q 018902 323 KIAERWIIVVGDTTTLQEEHILFKYS 348 (349)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (349)
. .+.+.+ ++...+-.|-+|+
T Consensus 283 ~---~~~~~~---G~~~~~~~~~~~~ 302 (302)
T d1utea_ 283 V---TYIEAS---GKSLFKTKLPRRA 302 (302)
T ss_dssp E---EEEETT---SCEEEEEEECCCC
T ss_pred E---EEEeCC---CCEEEEEEecCCC
Confidence 5 456533 4566666666664
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.75 E-value=1.3e-18 Score=159.57 Aligned_cols=66 Identities=21% Similarity=0.363 Sum_probs=51.4
Q ss_pred cEEEEEeCCCCCcCh--------------HHHHHHhhCCCCCEEEEcCCCCCCc----------HHHHHHHHcCCCCEEE
Q 018902 39 VRIVIVGDVHDDWDL--------------QEDSKALQLLKPDLVLFTGDFGNEN----------VEIVQSVAELEFPKAV 94 (349)
Q Consensus 39 mril~iSDlH~~~~~--------------~~~~~~i~~~~pD~vI~~GDl~~~~----------~~~l~~l~~l~~Pi~~ 94 (349)
|||+|+||+|++... +++++.+++.+||+||++||++|.. .+.++.+...++|+++
T Consensus 1 Mkilh~SDlHlG~~~~~~~~~~~~~~~~l~~iv~~a~~~~~D~vli~GDlfd~~~~~~~~~~~~~~~~~~l~~~~i~v~~ 80 (333)
T d1ii7a_ 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVFA 80 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCEEE
T ss_pred CEEEEEecCcCCCCCcCchhHHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHhhHHhcCCcEEE
Confidence 899999999987431 3445666678999999999999742 2355566666899999
Q ss_pred EcCCCCCCcc
Q 018902 95 ILGNHDSWKT 104 (349)
Q Consensus 95 V~GNHD~~~~ 104 (349)
|+||||....
T Consensus 81 i~GNHD~~~~ 90 (333)
T d1ii7a_ 81 IEGNHDRTQR 90 (333)
T ss_dssp ECCTTTCCSS
T ss_pred eCCCCccccc
Confidence 9999998643
|
| >d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Uncharacterized protein SP1879 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.73 E-value=3.8e-17 Score=137.27 Aligned_cols=59 Identities=25% Similarity=0.245 Sum_probs=43.0
Q ss_pred CccEEEEEeCCCCCcCh-HHHHHHhhCCCCCEEEEcCCCCCCcHHHHHHHHcCCCCEEEEcCCCCCC
Q 018902 37 SVVRIVIVGDVHDDWDL-QEDSKALQLLKPDLVLFTGDFGNENVEIVQSVAELEFPKAVILGNHDSW 102 (349)
Q Consensus 37 ~~mril~iSDlH~~~~~-~~~~~~i~~~~pD~vI~~GDl~~~~~~~l~~l~~l~~Pi~~V~GNHD~~ 102 (349)
..+||+++||+|++... ++.++.+ ..++|.|+++||+..... .....++.+|.||||..
T Consensus 2 ~~~kI~viSD~Hgn~~al~~vl~~~-~~~~D~iih~GD~~~~~~------~~~~~~~~~V~GN~D~~ 61 (173)
T d3ck2a1 2 AKQTIIVMSDSHGDSLIVEEVRDRY-VGKVDAVFHNGDSELRPD------SPLWEGIRVVKGNMDFY 61 (173)
T ss_dssp CCEEEEEECCCTTCHHHHHHHHHHH-TTTSSEEEECSCCCSCTT------CGGGTTEEECCCTTCCS
T ss_pred CCCEEEEEeccCCCHHHHHHHHHHh-hcCCCEEEECCcccCccc------chhhcCCeEEecCcccc
Confidence 35799999999998654 4455544 347999999999875421 11234789999999964
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Probab=99.71 E-value=7.5e-17 Score=136.27 Aligned_cols=65 Identities=17% Similarity=0.297 Sum_probs=54.3
Q ss_pred ccEEEEEeCCCCCcCh-HHHHHHhhCCCCCEEEEcCCCCCC-----------cHHHHHHHHcCCCCEEEEcCCCCCC
Q 018902 38 VVRIVIVGDVHDDWDL-QEDSKALQLLKPDLVLFTGDFGNE-----------NVEIVQSVAELEFPKAVILGNHDSW 102 (349)
Q Consensus 38 ~mril~iSDlH~~~~~-~~~~~~i~~~~pD~vI~~GDl~~~-----------~~~~l~~l~~l~~Pi~~V~GNHD~~ 102 (349)
+|||+++||+|++... +++++.++..++|.||++||+++. ..++++.+.++..++++|.||||..
T Consensus 1 mMki~iiSDiHg~~~al~~vl~~~~~~~~D~iv~~GDiv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNhD~~ 77 (184)
T d1su1a_ 1 MMKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEVAHKVIAVRGNCDSE 77 (184)
T ss_dssp CCEEEEECCCTTBHHHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTTGGGEEECCCTTCCH
T ss_pred CcEEEEEeecCCCHHHHHHHHHHHhhcCCCEEEEcCcccccCccchhhhccCcHHHHHHHHhcCCcEEEecCCCCch
Confidence 5899999999987654 667777777899999999999863 2467888888888999999999963
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.69 E-value=3.1e-17 Score=144.50 Aligned_cols=64 Identities=11% Similarity=0.201 Sum_probs=47.3
Q ss_pred cEEEEEeCCCCCcCh-HHHHHHhh-----CCCCCEEEEcCCCCCC---cHHHHHHHHcC--CCCEEEEcCCCCCC
Q 018902 39 VRIVIVGDVHDDWDL-QEDSKALQ-----LLKPDLVLFTGDFGNE---NVEIVQSVAEL--EFPKAVILGNHDSW 102 (349)
Q Consensus 39 mril~iSDlH~~~~~-~~~~~~i~-----~~~pD~vI~~GDl~~~---~~~~l~~l~~l--~~Pi~~V~GNHD~~ 102 (349)
++|++|||+|++... +++++.+. ..++|.||++||+++. ..++++.|.++ ..++++|+||||..
T Consensus 1 v~I~visDiHg~~~~l~~~l~~i~~~~~~~~~~D~ii~~GDlvd~G~~~~evi~~l~~l~~~~~v~~v~GNHD~~ 75 (251)
T d1nnwa_ 1 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYPKEVIEVIKDLTKKENVKIIRGKYDQI 75 (251)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSCHHHHHHHHHHHHHHSCEEEECCHHHHH
T ss_pred CEEEEEEccccCHHHHHHHHHHHHHhhccCCCCcEEEEecCcCCCCCCcHHHHHHHHHHhhcCCEEEEeccHHHH
Confidence 489999999988754 55555553 2467999999999985 34555555443 35799999999953
|
| >d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Hypothetical protein aq 1666 domain: Hypothetical protein aq 1666 species: Aquifex aeolicus [TaxId: 63363]
Probab=99.37 E-value=4.3e-12 Score=107.22 Aligned_cols=62 Identities=23% Similarity=0.199 Sum_probs=47.2
Q ss_pred EEEEeCCCCCcCh--------------HHHHHHhhC--CCCCEEEEcCCCCCC---cHHHHHHHHcCCCCEEEEcCCCCC
Q 018902 41 IVIVGDVHDDWDL--------------QEDSKALQL--LKPDLVLFTGDFGNE---NVEIVQSVAELEFPKAVILGNHDS 101 (349)
Q Consensus 41 il~iSDlH~~~~~--------------~~~~~~i~~--~~pD~vI~~GDl~~~---~~~~l~~l~~l~~Pi~~V~GNHD~ 101 (349)
+.++||+|++... +.+++.+++ .+.|.|+++||++-. ..++++.|.+++..++.|.||||.
T Consensus 4 i~fiSD~Hfgh~~i~~~r~f~~~~~~~~~ii~~wn~~V~~~D~v~~LGD~~~~~~~~~~~~~~l~~L~g~~~lI~GNHD~ 83 (188)
T d1xm7a_ 4 MYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHFNDKNEYLRIWKALPGRKILVMGNHDK 83 (188)
T ss_dssp EEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCSCCTTSHHHHHHHSSSEEEEECCTTCC
T ss_pred EEEEeCcCCCCcchhhcCCCCCHHHHHHHHHHHHHhhcCCCCEEEEeCCccccCCCHHHHHHHHHHCCCceEEEecCCCc
Confidence 4579999987432 456677765 477999999999742 345677788888889999999996
Q ss_pred C
Q 018902 102 W 102 (349)
Q Consensus 102 ~ 102 (349)
.
T Consensus 84 ~ 84 (188)
T d1xm7a_ 84 D 84 (188)
T ss_dssp C
T ss_pred h
Confidence 4
|
| >d1usha2 d.159.1.2 (A:26-362) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=99.22 E-value=8.1e-10 Score=101.44 Aligned_cols=229 Identities=14% Similarity=0.174 Sum_probs=117.8
Q ss_pred ccEEEEEeCCCCCcCh-----------HHHHHH----hhCCCCCE-EEEcCCCCCC--------cHHHHHHHHcCCCCEE
Q 018902 38 VVRIVIVGDVHDDWDL-----------QEDSKA----LQLLKPDL-VLFTGDFGNE--------NVEIVQSVAELEFPKA 93 (349)
Q Consensus 38 ~mril~iSDlH~~~~~-----------~~~~~~----i~~~~pD~-vI~~GDl~~~--------~~~~l~~l~~l~~Pi~ 93 (349)
.++|+|++|+|+.... ..+++. +++..++. +|.+||++.. ....++.++.++.- .
T Consensus 8 ~ltILhtnD~Hg~l~~~~~~~~g~a~~~~~i~~~r~~~~~~~~~~l~ldaGD~~~gs~~s~~~~g~~~~~~mn~~g~D-a 86 (337)
T d1usha2 8 KITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGYD-A 86 (337)
T ss_dssp EEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHHTCC-E
T ss_pred EEEEEEEeecccCCcCCCCCCcCHHHHHHHHHHHHHHHHhcCCCEEEEECCCCcccCHHHHHhCChHHHHHHHhcCCe-E
Confidence 4789999999975421 223333 33456664 5559999864 34567777766654 4
Q ss_pred EEcCCCCCCccccccccchhHHHHHHHHhCCc---------------ceeeEEeecCCceEEEeCCeeeecCCchhhhhh
Q 018902 94 VILGNHDSWKTQEFSGKKKDGVQLQLECLGEE---------------HVAYRRLDFPTLKLSIVGGRPFSCGGQQIFRKR 158 (349)
Q Consensus 94 ~V~GNHD~~~~~~~~~~~~~~~~~~l~~~~~~---------------~~~~~~l~~~~~~i~~~g~~~~~~~g~~~~~~~ 158 (349)
.++||||+.... +.+.+.+....-. ...|..++..++++.++|...-.+.. +....
T Consensus 87 ~~~GNHEfd~G~-------~~l~~~~~~~~~p~l~aN~~~~~~~~~~~~py~I~~~~g~kVgviG~~~~~~~~--~~~~~ 157 (337)
T d1usha2 87 MAIGNHEFDNPL-------TVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAK--IGNPE 157 (337)
T ss_dssp EECCGGGGSSCH-------HHHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTT--SSSCC
T ss_pred EEechhhhccch-------HHHHHHHHhcCceEeeccccccccccccccceeeeecCCeEEEeeccccccccc--ccCcc
Confidence 668999975322 2244444333221 11233445566666666542111000 00000
Q ss_pred hhhhccCCcchHHHHHHHHHHHhCCCCCCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCC-CCHHHHHHHHHHHHhcCC
Q 018902 159 LLSVRYGVQDMDESAKRIYKVALGTPDDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDH-GDPDLAQAISLLKETTKL 237 (349)
Q Consensus 159 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~-G~~~~~~al~~l~~~~~~ 237 (349)
. .......+..+...+..+.+++....+..|+++|.+....... .... ++.+++. ... ..
T Consensus 158 ~-~~~~~~~d~~~~~~~~~~~l~~~~~~D~iI~lsH~G~~~d~~~------------~~~~~~~~~la~----~~~--~~ 218 (337)
T d1usha2 158 Y-FTDIEFRKPADEAKLVIQELQQTEKPDIIIAATHMGHYDNGEH------------GSNAPGDVEMAR----ALP--AG 218 (337)
T ss_dssp C-CTTEEECCHHHHHHHHHHHHHHHTCCSEEEEEEESCCCGGGCC------------TTSCCCHHHHHH----HSC--TT
T ss_pred c-ccCcccccHHHHHHHHHHHHhhccCCCEEEEecccCccccccc------------ccccchhHHHHH----hCc--cc
Confidence 0 0001122334445555555554334467999999864221000 0011 2222211 111 23
Q ss_pred CccEEEeCccCCCcccCC----------c----ceEEEEEcCCceEEEeecccceeeccCCccCCCCCcccccccccCCC
Q 018902 238 CIPLVVFGHMHKELAYGN----------G----LRKMIVVGADSTIYLNGAIVPRVKRLIDEQGADSSSVSNKTSFLRPD 303 (349)
Q Consensus 238 ~~~lvl~GH~H~~~~~~~----------g----~~~~~~~~~~gt~yvn~g~~pr~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (349)
++|+++.||+|....... + .... ++++++.+|..
T Consensus 219 ~vD~IvgGHsH~~~~~~~~~~~~~~~~~~~~~~~~~~-----n~~~vvqag~~--------------------------- 266 (337)
T d1usha2 219 SLAMIVGGHSQDPVCMAAENKKQVDYVPGTPCKPDQQ-----NGIWIVQAHEW--------------------------- 266 (337)
T ss_dssp SSSEEECCSSCCBCCEEETTEECSSCCTTSCCCCEEE-----TTEEEECBCST---------------------------
T ss_pred CceEEecCccCccccccccCccccccCCCccccccCc-----CCEEEEeCChH---------------------------
Confidence 699999999998632110 0 0122 56777777653
Q ss_pred CCCceeeEEEEEEeCCeEeEEEEEee
Q 018902 304 SKGTVRAFTVVEILDGRIDKIAERWI 329 (349)
Q Consensus 304 ~~~~~~~f~~v~i~~~~v~~~~~~~~ 329 (349)
+..-+..-|+++++++........
T Consensus 267 --g~~lG~i~l~~~~~~~~~~~~~~~ 290 (337)
T d1usha2 267 --GKYVGRADFEFRNGEMKMVNYQLI 290 (337)
T ss_dssp --TSEEEEEEEEEETTEEEEEEEEEE
T ss_pred --HcEEEEEEEEEECCeEEEEEeEEE
Confidence 334455667778888877776654
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Probab=99.08 E-value=8.8e-11 Score=101.04 Aligned_cols=61 Identities=25% Similarity=0.358 Sum_probs=47.8
Q ss_pred EEEEEeCCCCCcCh-HHHHHHhhC-CCCCEEEEcCCCCCCc---HHHHHHHHcCCCCEEEEcCCCCCC
Q 018902 40 RIVIVGDVHDDWDL-QEDSKALQL-LKPDLVLFTGDFGNEN---VEIVQSVAELEFPKAVILGNHDSW 102 (349)
Q Consensus 40 ril~iSDlH~~~~~-~~~~~~i~~-~~pD~vI~~GDl~~~~---~~~l~~l~~l~~Pi~~V~GNHD~~ 102 (349)
||++|||+|++... +++++.+.. .+.|.+|++||++|+. .++++.+. ...+.+|.||||..
T Consensus 14 rI~vIgDIHG~~~~L~~lL~~i~~~~~~d~lv~lGD~vDrGp~s~~vl~~l~--~~~~~~i~GNHE~~ 79 (219)
T d1g5ba_ 14 NIWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENVECLELIT--FPWFRAVRGNHEQM 79 (219)
T ss_dssp CEEEECCCTTCHHHHHHHHHHHTCCTTTCEEEECSCCSSSSSCHHHHHGGGG--STTEEECCCHHHHH
T ss_pred eEEEEEecccCHHHHHHHHHHcCCCCCCCEEEEeCCccccCccHHHHHHHhh--ccccccccCcHHHH
Confidence 79999999999775 667777763 5678999999999974 45555554 34589999999953
|
| >d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Candida albicans [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Candida albicans [TaxId: 5476]
Probab=98.75 E-value=1.3e-07 Score=85.68 Aligned_cols=67 Identities=16% Similarity=0.269 Sum_probs=42.8
Q ss_pred CCccEEEEEeCCCCCcC--------------hHHHH----HHhhCCCCC-EEEEcCCCCCCc----------HHHHHHHH
Q 018902 36 ASVVRIVIVGDVHDDWD--------------LQEDS----KALQLLKPD-LVLFTGDFGNEN----------VEIVQSVA 86 (349)
Q Consensus 36 ~~~mril~iSDlH~~~~--------------~~~~~----~~i~~~~pD-~vI~~GDl~~~~----------~~~l~~l~ 86 (349)
...++|+|++|+|+... ..++. +..++..++ ++|.+||+++.. ...++.++
T Consensus 9 ~~~l~iLhtnD~Hg~l~~~~~~~~~~~~~gg~a~~~~~~~~~~~~~~~~~llldaGD~~~Gt~~~~~~~~~G~~~~~~mn 88 (322)
T d3c9fa2 9 WNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIFI 88 (322)
T ss_dssp CCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHHT
T ss_pred cCEEEEEEEeccccCCCCccccccccCccccHHHHHHHHHHHHHhcCCCEEEEECCccCCCCchhhhcccCChHHHHHHh
Confidence 45699999999998432 01222 223345677 455799998742 23566666
Q ss_pred cCCCCEEEEcCCCCCCc
Q 018902 87 ELEFPKAVILGNHDSWK 103 (349)
Q Consensus 87 ~l~~Pi~~V~GNHD~~~ 103 (349)
.++.- ++++||||+..
T Consensus 89 ~lgyD-a~t~GNHEfd~ 104 (322)
T d3c9fa2 89 KQDYD-LLTIGNHELYL 104 (322)
T ss_dssp TSCCS-EECCCGGGSSS
T ss_pred ccCCc-EEeecceeccc
Confidence 55443 67789999853
|
| >d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=98.64 E-value=2.3e-06 Score=76.62 Aligned_cols=171 Identities=18% Similarity=0.146 Sum_probs=92.2
Q ss_pred ccEEEEEeCCCCCcC------------------hHHHHHHhhCCCC-CEEEEcCCCCCCc--------HHHHHHHHcCCC
Q 018902 38 VVRIVIVGDVHDDWD------------------LQEDSKALQLLKP-DLVLFTGDFGNEN--------VEIVQSVAELEF 90 (349)
Q Consensus 38 ~mril~iSDlH~~~~------------------~~~~~~~i~~~~p-D~vI~~GDl~~~~--------~~~l~~l~~l~~ 90 (349)
+++|+|++|+|+... ...+++.+++..+ -+++-+||++... ...++.++.++.
T Consensus 2 tl~IlhtnD~Hg~l~~~~~~~~~~~~~~gG~ar~~t~i~~~r~~~~~~l~ldaGD~~~Gs~~~~~~~g~~~~~~~n~~gy 81 (302)
T d2z1aa2 2 TLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLYFNQYRGLADRYFMHRLRY 81 (302)
T ss_dssp EEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHHHHHHTTHHHHHHHHHTTC
T ss_pred EEEEEEEcccccCcccccccccCCccccCcHHHHHHHHHHHHHhCCCeEEEEcCCCCCCCHhHhhhcchhHHHHHHhccc
Confidence 368999999998542 1335566654444 4788999998753 345566666544
Q ss_pred CEEEEcCCCCCCccccccccchhHHHHHHHHhC-----------------CcceeeEEeecCCceEEEeCCeeeecCCch
Q 018902 91 PKAVILGNHDSWKTQEFSGKKKDGVQLQLECLG-----------------EEHVAYRRLDFPTLKLSIVGGRPFSCGGQQ 153 (349)
Q Consensus 91 Pi~~V~GNHD~~~~~~~~~~~~~~~~~~l~~~~-----------------~~~~~~~~l~~~~~~i~~~g~~~~~~~g~~ 153 (349)
=..++||||+.... ..+...+.... .....|..++..++++.++|... ....
T Consensus 82 -Da~~~GNHEfd~G~-------~~l~~~~~~~~~p~l~aNi~~~~~~~~~~~~~~y~i~~~~g~kIgiiG~~t---~~~~ 150 (302)
T d2z1aa2 82 -RAMALGNHEFDLGP-------GPLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTT---PDTR 150 (302)
T ss_dssp -CEEECCGGGGTTCH-------HHHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEEC---TTHH
T ss_pred -ccccccchhhhcCh-------hHHHHHhhhcccceeEeeeeccccccccCccceeEEEEECCeEEEEEeccc---cccc
Confidence 37899999975432 11222221110 11123444555666666666421 1110
Q ss_pred hhhhhhhhhccCCcchHHHHHHHHHHHhCCCCCCeEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 018902 154 IFRKRLLSVRYGVQDMDESAKRIYKVALGTPDDHLVILLAHNGPSGLGSEPNDICGKDWGFGGGDHGDPDLAQAISLLKE 233 (349)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~Ilv~H~PP~~~g~~~~~~~~~d~~~~~~~~G~~~~~~al~~l~~ 233 (349)
..... .......+..+..+++.+.+++.. .+..|+++|.+- + .-..+.+
T Consensus 151 ~~~~~--~~~~~~~d~~~~~~~~~~~l~~~~-~DiiV~l~H~g~-------------------------~---~d~~la~ 199 (302)
T d2z1aa2 151 EISNP--GPTVAFLDPYESAQKAVYELLAKG-VNKIVVLSHLGY-------------------------G---EDLKLAR 199 (302)
T ss_dssp HHSCC--CTTCEECCHHHHHHHHHHHHHHTT-CCCEEEEEESCH-------------------------H---HHHHHHT
T ss_pred ccccc--cCcccccCHHHHHHHHHHHhhccC-CCEEEEeeccCc-------------------------c---hhhHHHh
Confidence 00000 001112233444555556655322 356899999841 1 1122334
Q ss_pred hcCCCccEEEeCccCCCc
Q 018902 234 TTKLCIPLVVFGHMHKEL 251 (349)
Q Consensus 234 ~~~~~~~lvl~GH~H~~~ 251 (349)
+. .++|+++.||.|...
T Consensus 200 ~~-~giD~ii~gh~h~~~ 216 (302)
T d2z1aa2 200 RL-VGVQVIVGGHSHTLL 216 (302)
T ss_dssp TC-SSCCEEEECSSCCCB
T ss_pred cC-CCeeeeecCccceee
Confidence 33 379999999999864
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.10 E-value=0.00027 Score=62.96 Aligned_cols=63 Identities=22% Similarity=0.367 Sum_probs=41.8
Q ss_pred EEEEEeCCCCCcChHHHHHHhh--CCCCC--EEEEcCCCCCCc---HHHHHHHHc----CCCCEEEEcCCCCCCcc
Q 018902 40 RIVIVGDVHDDWDLQEDSKALQ--LLKPD--LVLFTGDFGNEN---VEIVQSVAE----LEFPKAVILGNHDSWKT 104 (349)
Q Consensus 40 ril~iSDlH~~~~~~~~~~~i~--~~~pD--~vI~~GDl~~~~---~~~l~~l~~----l~~Pi~~V~GNHD~~~~ 104 (349)
.+.++||+|++... +++.++ ...++ -.|+.||++|+. .+.+-.|-. .+-.++.+.||||....
T Consensus 61 pv~VvGDiHGq~~D--L~~if~~~g~p~~~~~ylFLGDYVDRG~~slEvi~lL~~lKi~yP~~v~LLRGNHE~~~~ 134 (324)
T d1s95a_ 61 KITVCGDTHGQFYD--LLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNM 134 (324)
T ss_dssp EEEEECCCTTCHHH--HHHHHHHHCCCBTTBCEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHH
T ss_pred CEEEEEECCCCHHH--HHHHHHHCCCCCCCCeEEEecccccCcCcceeehHHHHHHHHhCCCcEEeccCCcccccc
Confidence 68999999999753 333322 23332 489999999974 333322221 26679999999997543
|
| >d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.98 E-value=0.0003 Score=61.74 Aligned_cols=64 Identities=25% Similarity=0.339 Sum_probs=42.7
Q ss_pred EEEEEeCCCCCcCh-HHHHHHhhCCCCCEEEEcCCCCCCc---HHHHHHHHc----CCCCEEEEcCCCCCCc
Q 018902 40 RIVIVGDVHDDWDL-QEDSKALQLLKPDLVLFTGDFGNEN---VEIVQSVAE----LEFPKAVILGNHDSWK 103 (349)
Q Consensus 40 ril~iSDlH~~~~~-~~~~~~i~~~~pD~vI~~GDl~~~~---~~~l~~l~~----l~~Pi~~V~GNHD~~~ 103 (349)
.+.++||+|++... .++++......-.-+|+.||++|+. .+.+-.|.. .|..++.+.||||...
T Consensus 46 pv~VvGDlHG~~~DL~~if~~~g~p~~~~ylFLGDYVDRG~~slEvl~lL~alKi~~P~~v~lLRGNHE~~~ 117 (288)
T d3c5wc1 46 PVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQ 117 (288)
T ss_dssp SEEEECBCTTCHHHHHHHHHHHCCTTTSCEEECSCCCCSSSSHHHHHHHHHHHHHHCTTTEEECCCTTSSHH
T ss_pred CeEEEeeCCCCHHHHHHHHHhcCCCccceEEecCcccCCCCcceeHHHHHHHHHhhCCCeEEEeccCCcccc
Confidence 39999999999763 3333333222234599999999974 343333322 2667999999999754
|
| >d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-1 (PP-1) species: Human (Homo sapiens), beta isoform [TaxId: 9606]
Probab=96.94 E-value=0.00031 Score=61.74 Aligned_cols=65 Identities=18% Similarity=0.206 Sum_probs=42.9
Q ss_pred EEEEEeCCCCCcCh-HHHHHHhhCCCCCEEEEcCCCCCCc---HHHHHHHHc----CCCCEEEEcCCCCCCcc
Q 018902 40 RIVIVGDVHDDWDL-QEDSKALQLLKPDLVLFTGDFGNEN---VEIVQSVAE----LEFPKAVILGNHDSWKT 104 (349)
Q Consensus 40 ril~iSDlH~~~~~-~~~~~~i~~~~pD~vI~~GDl~~~~---~~~l~~l~~----l~~Pi~~V~GNHD~~~~ 104 (349)
.+.++||+|++... .++.+..-...-.-.|+.||++|+. .+.+-.|-. .|..++.+.||||....
T Consensus 53 pv~VvGDiHG~~~DL~~if~~~g~p~~~~ylFLGDYVDRG~~slE~i~lL~aLKi~~P~~v~lLRGNHE~~~~ 125 (294)
T d1jk7a_ 53 PLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASI 125 (294)
T ss_dssp SEEEECBCTTCHHHHHHHHHHHCCTTSSCEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHH
T ss_pred CeEEEEECCCChHhHHHHHhhcCCCccceEEeeccccCCCccchHHHHHHHHHHhhCCCeEEEecCCcccccc
Confidence 38999999999763 3333332222334589999999974 343333322 26779999999997543
|
| >d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-2B (PP-2B, calcineurin A subunit) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.88 E-value=0.00052 Score=63.75 Aligned_cols=63 Identities=19% Similarity=0.240 Sum_probs=41.7
Q ss_pred EEEEeCCCCCcCh-HHHHHHhhCCCCCEEEEcCCCCCCc---HHHHHHHHc----CCCCEEEEcCCCCCCc
Q 018902 41 IVIVGDVHDDWDL-QEDSKALQLLKPDLVLFTGDFGNEN---VEIVQSVAE----LEFPKAVILGNHDSWK 103 (349)
Q Consensus 41 il~iSDlH~~~~~-~~~~~~i~~~~pD~vI~~GDl~~~~---~~~l~~l~~----l~~Pi~~V~GNHD~~~ 103 (349)
+.++||+|++... .++++..-...-.-.|+.||++|+. .+++-.|-. .+..++.+.||||...
T Consensus 72 v~VvGDIHGq~~DLl~If~~~G~P~~~~yLFLGDYVDRG~~SlEvlllL~aLKi~yP~~V~LLRGNHE~~~ 142 (473)
T d1auia_ 72 VTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRH 142 (473)
T ss_dssp EEEECCCTTCHHHHHHHHHHHCCTTTCCEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHH
T ss_pred EEEEEeCCCCHHHHHHHHHHcCCCCcceEEecCccccCCcccHHHHHHHHHHHHhCCCeEEEeCCCCccHh
Confidence 8999999999763 3333332222233588999999974 443333322 2667999999999654
|
| >d2z06a1 d.159.1.10 (A:1-252) Hypothetical protein TTHA0625 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TTHA0625-like domain: Hypothetical protein TTHA0625 species: Thermus thermophilus [TaxId: 274]
Probab=96.58 E-value=0.068 Score=44.79 Aligned_cols=62 Identities=24% Similarity=0.297 Sum_probs=44.7
Q ss_pred cEEEEEeCCCCCcCh---HHHHHHhhCCCCCEEEEcCCCCCC----cHHHHHHHHcCCCCEEEEcCCCCCC
Q 018902 39 VRIVIVGDVHDDWDL---QEDSKALQLLKPDLVLFTGDFGNE----NVEIVQSVAELEFPKAVILGNHDSW 102 (349)
Q Consensus 39 mril~iSDlH~~~~~---~~~~~~i~~~~pD~vI~~GDl~~~----~~~~l~~l~~l~~Pi~~V~GNHD~~ 102 (349)
|||++++|+=+..-. +..+..+++ +.|+||.-|.-... ..+..+.|.+.++- +...|||=+.
T Consensus 1 MkiLfiGDIvG~~Gr~~v~~~Lp~Lk~-~~DfVIaNgENaa~G~Git~k~~~~L~~~GVD-vIT~GNH~wd 69 (252)
T d2z06a1 1 MRVLFIGDVMAEPGLRAVGLHLPDIRD-RYDLVIANGENAARGKGLDRRSYRLLREAGVD-LVSLGNHAWD 69 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHGG-GCSEEEEECTTTTTTSSCCHHHHHHHHHHTCC-EEECCTTTTS
T ss_pred CeEEEEeccCCHHHHHHHHHHhHHHHh-hCCEEEEeeeccCCCcCCCHHHHHHHHHhCCC-EEEcCccccc
Confidence 899999999876543 334444543 67999999987643 35677777766665 6789999864
|
| >d1t70a_ d.159.1.9 (A:) Putative phosphatase DR1281 {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Putative phosphatase DR1281 species: Deinococcus radiodurans [TaxId: 1299]
Probab=96.51 E-value=0.12 Score=43.36 Aligned_cols=62 Identities=19% Similarity=0.280 Sum_probs=45.0
Q ss_pred cEEEEEeCCCCCcCh---HHHHHHhhCCCCCEEEEcCCCCCC----cHHHHHHHHcCCCCEEEEcCCCCCC
Q 018902 39 VRIVIVGDVHDDWDL---QEDSKALQLLKPDLVLFTGDFGNE----NVEIVQSVAELEFPKAVILGNHDSW 102 (349)
Q Consensus 39 mril~iSDlH~~~~~---~~~~~~i~~~~pD~vI~~GDl~~~----~~~~l~~l~~l~~Pi~~V~GNHD~~ 102 (349)
|||++++|+=+..-. ++.+..+++ +.|+||.-|.-... ..+..+.|.++++- +...|||=+.
T Consensus 1 MkILfiGDIvG~~Gr~~v~~~Lp~lk~-~~DfVIaNgENaa~G~Git~~~~~~l~~~GvD-viT~GNH~wd 69 (255)
T d1t70a_ 1 MRVLFIGDVFGQPGRRVLQNHLPTIRP-QFDFVIVNMENSAGGFGMHRDAARGALEAGAG-CLTLGNHAWH 69 (255)
T ss_dssp CEEEEECCBBHHHHHHHHHHHHHHHGG-GCSEEEEECTBTTTTSSCCHHHHHHHHHHTCS-EEECCTTTTS
T ss_pred CeEEEEecCCCHHHHHHHHHHhHHHHh-hCCEEEECCccCCCCcCCCHHHHHHHHHcCCc-EEEcCchhhc
Confidence 899999999876443 344555543 58999999997653 35677777766665 6789999864
|
| >d1t71a_ d.159.1.9 (A:) Hypothetical protein MPN349 {Mycoplasma pneumoniae [TaxId: 2104]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Hypothetical protein MPN349 species: Mycoplasma pneumoniae [TaxId: 2104]
Probab=94.55 E-value=0.45 Score=40.31 Aligned_cols=67 Identities=16% Similarity=0.288 Sum_probs=47.2
Q ss_pred CCCccEEEEEeCCCCCcChHH---HHHHhh-CCCCCEEEEcCCCCCC----cHHHHHHHHcCCCCEEEEcCCCCCC
Q 018902 35 SASVVRIVIVGDVHDDWDLQE---DSKALQ-LLKPDLVLFTGDFGNE----NVEIVQSVAELEFPKAVILGNHDSW 102 (349)
Q Consensus 35 ~~~~mril~iSDlH~~~~~~~---~~~~i~-~~~pD~vI~~GDl~~~----~~~~l~~l~~l~~Pi~~V~GNHD~~ 102 (349)
|.+.|||++++|+=+..-.+. .+..++ +.++|+||.-|.-... ..+..+.|.+.++- +...|||=+.
T Consensus 1 m~~~MkILfiGDIvG~~GR~~v~~~Lp~Lr~~~~iDfVIaNgENaa~G~Git~k~~~eL~~~GvD-vIT~GNH~wd 75 (281)
T d1t71a_ 1 MMNSIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGKGLSLKHYEFLKEAGVN-YITMGNHTWF 75 (281)
T ss_dssp CCCCCEEEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTTTSSCCHHHHHHHHHHTCC-EEECCTTTTC
T ss_pred CCccceEEEEEccCCHHHHHHHHHHhHHHHHHhCCCEEEECCccCCCCcCCCHHHHHHHHHhCCc-EEEcCchhhh
Confidence 356799999999987644322 233333 4699999999997653 35677777766665 6789999754
|