Citrus Sinensis ID: 019030
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 347 | ||||||
| 255561190 | 478 | conserved hypothetical protein [Ricinus | 0.991 | 0.719 | 0.848 | 1e-158 | |
| 224134334 | 477 | predicted protein [Populus trichocarpa] | 1.0 | 0.727 | 0.821 | 1e-154 | |
| 224094753 | 454 | predicted protein [Populus trichocarpa] | 0.991 | 0.757 | 0.819 | 1e-153 | |
| 356518101 | 491 | PREDICTED: uncharacterized protein LOC10 | 1.0 | 0.706 | 0.770 | 1e-147 | |
| 356509743 | 474 | PREDICTED: uncharacterized protein LOC10 | 0.994 | 0.727 | 0.777 | 1e-146 | |
| 356496755 | 470 | PREDICTED: uncharacterized protein LOC10 | 0.988 | 0.729 | 0.795 | 1e-146 | |
| 297735172 | 481 | unnamed protein product [Vitis vinifera] | 0.991 | 0.715 | 0.791 | 1e-143 | |
| 388493882 | 473 | unknown [Medicago truncatula] | 0.982 | 0.720 | 0.773 | 1e-142 | |
| 357518359 | 480 | hypothetical protein MTR_8g077830 [Medic | 0.982 | 0.710 | 0.764 | 1e-142 | |
| 225430784 | 476 | PREDICTED: uncharacterized protein LOC10 | 0.979 | 0.714 | 0.787 | 1e-141 |
| >gi|255561190|ref|XP_002521607.1| conserved hypothetical protein [Ricinus communis] gi|223539285|gb|EEF40878.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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Score = 562 bits (1449), Expect = e-158, Method: Compositional matrix adjust.
Identities = 292/344 (84%), Positives = 313/344 (90%)
Query: 1 MIMGAAGSTVYYNLRLRHPTLDMPLIDYDLALLFQPMLMLGISIGVAFNVMFADWMVTVL 60
MIMGAAGSTVYYN+RLRHPTLDMPLIDYDLALLFQPMLMLGISIGVAFNVMFADWMVTVL
Sbjct: 134 MIMGAAGSTVYYNMRLRHPTLDMPLIDYDLALLFQPMLMLGISIGVAFNVMFADWMVTVL 193
Query: 61 LIILFIGTSTKALFKGIDTWKKETMMKKEAAKVLESESKAADVDGQDYKQLPSGPSTVHD 120
LIILFIGTSTKALFKGIDTWKKE+MMKKEAA+ LESESK D +GQDYK LPSGP + D
Sbjct: 194 LIILFIGTSTKALFKGIDTWKKESMMKKEAARQLESESKPNDGEGQDYKPLPSGPVALED 253
Query: 121 EEVPIIKNIYWKELSLLLYVWLGFLAVQLAKEYVVPCSITYWILNALQVPIAVSVALFEA 180
EE+ + +NIYWKEL+LL+YVW+GFLAVQ+ K YV CS+ YWILNALQVPIA SV LFEA
Sbjct: 254 EEISLFQNIYWKELALLVYVWVGFLAVQIVKSYVRTCSVAYWILNALQVPIAASVTLFEA 313
Query: 181 ICLYKGTRVIASKGKEITNWKIHQIVFYCFCGIVAGMVGGLLGLGGGFILGPLFLELGIP 240
ICL KGTRVIAS+GKEITNWK HQI+ YC CGI+AGMVGGLLGLGGGFILGPLFLELGIP
Sbjct: 314 ICLRKGTRVIASRGKEITNWKYHQILLYCSCGIIAGMVGGLLGLGGGFILGPLFLELGIP 373
Query: 241 PQVASATSTFAMTFSSSMSVVQYYLLDRFPVPYAAFFTLVATFAAFAGQHVVRKIIAVLG 300
PQVASATSTFAM FSSSMSVVQYYLL RFPVPYA FF LVAT AA GQHVVRKIIA+LG
Sbjct: 374 PQVASATSTFAMVFSSSMSVVQYYLLKRFPVPYATFFVLVATVAALVGQHVVRKIIAILG 433
Query: 301 RASIIVFILALTIFVSAISLGGFGIENMVKKLKNQEYMGFENLC 344
RASII+FILALTIFVSAISLGG GI +MV+KL N+EYMGFENLC
Sbjct: 434 RASIIIFILALTIFVSAISLGGVGIVDMVEKLTNEEYMGFENLC 477
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224134334|ref|XP_002327812.1| predicted protein [Populus trichocarpa] gi|222836897|gb|EEE75290.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|224094753|ref|XP_002310222.1| predicted protein [Populus trichocarpa] gi|222853125|gb|EEE90672.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356518101|ref|XP_003527721.1| PREDICTED: uncharacterized protein LOC100789748 [Glycine max] gi|83853827|gb|ABC47859.1| membrane protein-like protein [Glycine max] | Back alignment and taxonomy information |
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| >gi|356509743|ref|XP_003523605.1| PREDICTED: uncharacterized protein LOC100816633 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356496755|ref|XP_003517231.1| PREDICTED: uncharacterized protein LOC100801441 [Glycine max] | Back alignment and taxonomy information |
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| >gi|297735172|emb|CBI17534.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|388493882|gb|AFK35007.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|357518359|ref|XP_003629468.1| hypothetical protein MTR_8g077830 [Medicago truncatula] gi|355523490|gb|AET03944.1| hypothetical protein MTR_8g077830 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|225430784|ref|XP_002267318.1| PREDICTED: uncharacterized protein LOC100253061 [Vitis vinifera] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 347 | ||||||
| TAIR|locus:504956017 | 476 | AT2G25737 [Arabidopsis thalian | 0.985 | 0.718 | 0.511 | 2.8e-89 | |
| TAIR|locus:2040605 | 459 | AT2G36630 [Arabidopsis thalian | 0.979 | 0.740 | 0.367 | 3.2e-58 | |
| TAIR|locus:2200061 | 367 | AT1G11540 "AT1G11540" [Arabido | 0.953 | 0.901 | 0.256 | 6.8e-24 | |
| TAIR|locus:2195773 | 458 | AT1G61740 [Arabidopsis thalian | 0.495 | 0.375 | 0.287 | 2.7e-22 | |
| TAIR|locus:2127343 | 449 | AT4G21250 "AT4G21250" [Arabido | 0.893 | 0.690 | 0.238 | 9.8e-18 | |
| TAIR|locus:2127348 | 393 | AT4G21260 "AT4G21260" [Arabido | 0.149 | 0.132 | 0.423 | 4.6e-13 | |
| DICTYBASE|DDB_G0269644 | 549 | DDB_G0269644 [Dictyostelium di | 0.224 | 0.142 | 0.358 | 7.6e-09 |
| TAIR|locus:504956017 AT2G25737 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 891 (318.7 bits), Expect = 2.8e-89, P = 2.8e-89
Identities = 179/350 (51%), Positives = 227/350 (64%)
Query: 1 MIMGAAGSTVYYNLRLRHPTLDMPLIDYDLALLFQPMLMLGISIGVAFNVMFADWMVTVL 60
MIMGA+ STVYYNLRLRHPTLDMP+IDYDLALL QPMLMLGISIGVAFNV+F DW+VTVL
Sbjct: 127 MIMGASVSTVYYNLRLRHPTLDMPIIDYDLALLIQPMLMLGISIGVAFNVIFPDWLVTVL 186
Query: 61 LIILFIGTSTKALFKGIDXXXXXXXXXXXXXXVLESES-KAADVDGQDYKQLPSGPST-- 117
LI+LF+GTSTKA KG + LES +V+ Y LP+ PST
Sbjct: 187 LIVLFLGTSTKAFLKGSETWNKETIEKKEAAKRLESNGVSGTEVE---YVPLPAAPSTNP 243
Query: 118 --VHDEEVPIIKNIYWKELSLLLYVWLGFLAVQLAKEYVVPCSITYWILNALQVPIAVSV 175
EEV II+N+YWKEL LL++VW+ FLA+Q++K+ + CS+ YW++N LQ+P+AV V
Sbjct: 244 GNKKKEEVSIIENVYWKELGLLVFVWIVFLALQISKQNLANCSVAYWVINLLQIPVAVGV 303
Query: 176 ALFEAICLYKGTRVIASKGKEITNWKIHQIVFYCFCGIVAGMVXXXXXXXXXXXXXXXXX 235
+ +EA+ LY+G R+IASKG+ +N+ + Q+V YC GI+AG+V
Sbjct: 304 SGYEAVALYQGRRIIASKGQGDSNFTVGQLVMYCTFGIIAGIVGGLLGLGGGFIMGPLFL 363
Query: 236 XXXXXPQXXXXXXXXXXXXXXXXXXXQYYLLDRFPVPYXXXXXXXXXXXXXXGQHVVRKI 295
PQ +YYLL RFPVPY GQHVVR++
Sbjct: 364 ELGVPPQVSSATATFAMTFSSSMSVVEYYLLKRFPVPYALYLVGVATIAAWVGQHVVRRL 423
Query: 296 IAVLGRASIIVFILALTIFVSAISLGGFGIENMVKKLKNQEYMGFENLCQ 345
IA +GRAS+I+FILA IF+SAISLGG GI NM+ K++ EYMGFENLC+
Sbjct: 424 IAAIGRASLIIFILASMIFISAISLGGVGIVNMIGKIQRHEYMGFENLCK 473
|
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| TAIR|locus:2040605 AT2G36630 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2200061 AT1G11540 "AT1G11540" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2195773 AT1G61740 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2127343 AT4G21250 "AT4G21250" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2127348 AT4G21260 "AT4G21260" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0269644 DDB_G0269644 [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 347 | |||
| pfam01925 | 236 | pfam01925, TauE, Sulfite exporter TauE/SafE | 4e-11 | |
| pfam01925 | 236 | pfam01925, TauE, Sulfite exporter TauE/SafE | 2e-09 | |
| COG0730 | 258 | COG0730, COG0730, Predicted permeases [General fun | 6e-09 | |
| COG0730 | 258 | COG0730, COG0730, Predicted permeases [General fun | 3e-07 |
| >gnl|CDD|216790 pfam01925, TauE, Sulfite exporter TauE/SafE | Back alignment and domain information |
|---|
Score = 61.8 bits (151), Expect = 4e-11
Identities = 27/108 (25%), Positives = 42/108 (38%)
Query: 208 YCFCGIVAGMVGGLLGLGGGFILGPLFLELGIPPQVASATSTFAMTFSSSMSVVQYYLLD 267
G++AG + GL G GGG I PL L L PP VA TS A+ +S + +
Sbjct: 1 LLLAGLLAGFLAGLAGFGGGLIAVPLLLLLLGPPHVAVGTSLLAVIATSLSGALAHRRRG 60
Query: 268 RFPVPYAAFFTLVATFAAFAGQHVVRKIIAVLGRASIIVFILALTIFV 315
L A G ++ + + + V +L + +
Sbjct: 61 NVDWRLLLRLLLGGLLGALLGALLLLLLPGAVLKLLFGVLLLLAALLM 108
|
This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81. Length = 236 |
| >gnl|CDD|216790 pfam01925, TauE, Sulfite exporter TauE/SafE | Back alignment and domain information |
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| >gnl|CDD|223802 COG0730, COG0730, Predicted permeases [General function prediction only] | Back alignment and domain information |
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| >gnl|CDD|223802 COG0730, COG0730, Predicted permeases [General function prediction only] | Back alignment and domain information |
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Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 347 | |||
| COG0730 | 258 | Predicted permeases [General function prediction o | 99.82 | |
| PRK10621 | 266 | hypothetical protein; Provisional | 99.81 | |
| PF01925 | 240 | TauE: Sulfite exporter TauE/SafE; InterPro: IPR002 | 99.76 | |
| PRK10621 | 266 | hypothetical protein; Provisional | 99.55 | |
| COG0730 | 258 | Predicted permeases [General function prediction o | 99.51 | |
| PF01925 | 240 | TauE: Sulfite exporter TauE/SafE; InterPro: IPR002 | 99.3 |
| >COG0730 Predicted permeases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.4e-19 Score=163.54 Aligned_cols=199 Identities=22% Similarity=0.318 Sum_probs=161.4
Q ss_pred chhHHHHHHHh-hhcCCCCCCCccchhHHHHHhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 019030 4 GAAGSTVYYNL-RLRHPTLDMPLIDYDLALLFQPMLMLGISIGVAFNVMFADWMVTVLLIILFIGTSTKALFKGIDTWKK 82 (347)
Q Consensus 4 g~sla~~i~~~-~~~hp~~~~plId~~l~l~l~P~~l~G~~iGv~ln~~~P~~ll~~l~~vlL~~~~~~~~~k~~~~~~~ 82 (347)
|+++....++. .....|++|..+||+.+..+.+..++|+.+|+.+...+|+..+...+.+++.+.+.+++++.++ .++
T Consensus 48 ~t~l~~~~~~~~~~~~~~~k~~~v~~~~~~~l~~~~~~G~~lG~~l~~~~~~~~l~~~~~~~ll~~~~~~~~~~~~-~~~ 126 (258)
T COG0730 48 GTSLLAVLFTSLSSALAYLKRGNVDWKLALILLLGALIGAFLGALLALLLPAELLKLLFGLLLLLLALYMLLGPRL-AKA 126 (258)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhccc-ccc
Confidence 45555555553 4555566777799999999999999999999999999999999999999999999999876221 000
Q ss_pred HHHHHHHHHHhhhhhccccccccccccCCCCCCCCCCCCccchhccchhHHHHHHHHHHHHHHHHHHhhcCCCCcchHHH
Q 019030 83 ETMMKKEAAKVLESESKAADVDGQDYKQLPSGPSTVHDEEVPIIKNIYWKELSLLLYVWLGFLAVQLAKEYVVPCSITYW 162 (347)
Q Consensus 83 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~cs~~yw 162 (347)
|. .+ ++ ..||.
T Consensus 127 ~~------------------~~---------------~~------~~~~~------------------------------ 137 (258)
T COG0730 127 ED------------------RA---------------AR------LRPLL------------------------------ 137 (258)
T ss_pred cc------------------cc---------------cc------cCcch------------------------------
Confidence 00 00 00 11111
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHhhcccccccCccccchhhhHHHHHHHHHHHHHHHHhhccccchhhHHHHHH-hcCCCh
Q 019030 163 ILNALQVPIAVSVALFEAICLYKGTRVIASKGKEITNWKIHQIVFYCFCGIVAGMVGGLLGLGGGFILGPLFL-ELGIPP 241 (347)
Q Consensus 163 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~sgl~GiGGG~i~vP~L~-~~g~~~ 241 (347)
.......|+++|+++|++|+|||...+|.+. ..+.|.
T Consensus 138 ------------------------------------------~~~~~~~g~~~G~~sG~~G~GgG~~~vp~l~~~~~~~~ 175 (258)
T COG0730 138 ------------------------------------------FALALLIGFLAGFLSGLFGVGGGFGIVPALLLLLLLPL 175 (258)
T ss_pred ------------------------------------------hHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhCch
Confidence 0122467889999999999999999999996 568999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-hCCccHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 019030 242 QVASATSTFAMTFSSSMSVVQYYL-LDRFPVPYAAFFTLVATFAAFAGQHVVRKIIAVLGRASIIVFILALTIF 314 (347)
Q Consensus 242 ~~A~ats~~~~~~~s~~~~~~~~~-~g~v~~~~~l~l~~~~~iGa~~Ga~l~~~l~~~~l~~~~~v~ll~~~~~ 314 (347)
+.+++||.+..++++..+...|.. .|++||.....+.+++++|+++|++++++++++.+|..+..+++...+.
T Consensus 176 ~~~~~ts~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~g~~~G~~lG~~l~~~~~~~~lr~~~~~~~~~~~~~ 249 (258)
T COG0730 176 KLAVATSLAIILNTASNGAALYLFALGAVDWPLALLLAVGSILGAYLGARLARRLSPKVLRRLFALVLLAVAIK 249 (258)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998 6999999988999999999999999999999999999998777766654
|
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| >PRK10621 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PF01925 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002781 This family is found in integral membrane proteins of prokaryotes which are uncharacterised | Back alignment and domain information |
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| >PRK10621 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >COG0730 Predicted permeases [General function prediction only] | Back alignment and domain information |
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| >PF01925 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002781 This family is found in integral membrane proteins of prokaryotes which are uncharacterised | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00