Citrus Sinensis ID: 019030


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------
MIMGAAGSTVYYNLRLRHPTLDMPLIDYDLALLFQPMLMLGISIGVAFNVMFADWMVTVLLIILFIGTSTKALFKGIDTWKKETMMKKEAAKVLESESKAADVDGQDYKQLPSGPSTVHDEEVPIIKNIYWKELSLLLYVWLGFLAVQLAKEYVVPCSITYWILNALQVPIAVSVALFEAICLYKGTRVIASKGKEITNWKIHQIVFYCFCGIVAGMVGGLLGLGGGFILGPLFLELGIPPQVASATSTFAMTFSSSMSVVQYYLLDRFPVPYAAFFTLVATFAAFAGQHVVRKIIAVLGRASIIVFILALTIFVSAISLGGFGIENMVKKLKNQEYMGFENLCQIS
ccccHHHHHHHHHHHHcccccccccEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHcccccccccccEEEHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccc
cccHHHHHHHHHHHHHHcccccccEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHccccHHccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEccccccccccHHHHEHHHHHHHHHHHHHHHHccccHHHHcHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccc
mimgaagsTVYYNLrlrhptldmpliDYDLALLFQPMLMLGISIGVAFNVMFADWMVTVLLIILFIGTSTKALFKGIDTWKKETMMKKEAAKVLESeskaadvdgqdykqlpsgpstvhdeevpiiKNIYWKELSLLLYVWLGFLAVQLAKEYVVPCSITYWILNALQVPIAVSVALFEAICLYKGtrviaskgkeitnwKIHQIVFYCFCGIVAGMVGGllglgggfilgplflelgippqvasatstfaMTFSSSMSVVQYYLldrfpvpyaAFFTLVATFAAFAGQHVVRKIIAVLGRASIIVFILALTIFVSAISLGGFGIENMVKKLKNQEYMGFENLCQIS
MIMGAAGSTVYYNLRLRHPTLDMPLIDYDLALLFQPMLMLGISIGVAFNVMFADWMVTVLLIILFIGTSTKALFKGIDTWKKETMMKKEAAKVLEseskaadvdgqdykqlpsgpstvhdeevPIIKNIYWKELSLLLYVWLGFLAVQLAKEYVVPCSITYWILNALQVPIAVSVALFEAICLYKGTRVIASKGKEITNWKIHQIVFYCFCGIVAGMVGGLLGLGGGFILGPLFLELGIPPQVASATSTFAMTFSSSMSVVQYYLLDRFPVPYAAFFTLVATFAAFAGQHVVRKIIAVLGRASIIVFILALTIFVSAISLGGFGIENMVKKLKNQEYMGFENLCQIS
MIMGAAGSTVYYNLRLRHPTLDMPLIDYDLALLFQPMLMLGISIGVAFNVMFADWMVTVLLIILFIGTSTKALFKGIDtwkketmmkkeaakVLESESKAADVDGQDYKQLPSGPSTVHDEEVPIIKNIYWKELSLLLYVWLGFLAVQLAKEYVVPCSITYWILNALQVPIAVSVALFEAICLYKGTRVIASKGKEITNWKIHQIVFYCFCGIVAGMVggllglgggfilgplflelgipPQvasatstfamtfsssmsvvQYYLLDRFPVPYaafftlvatfaafaGQHVVRKIIAVLGRASIIVFILALTIFVSAISLGGFGIENMVKKLKNQEYMGFENLCQIS
******GSTVYYNLRLRHPTLDMPLIDYDLALLFQPMLMLGISIGVAFNVMFADWMVTVLLIILFIGTSTKALFKGIDTWKK***************************************EVPIIKNIYWKELSLLLYVWLGFLAVQLAKEYVVPCSITYWILNALQVPIAVSVALFEAICLYKGTRVIASKGKEITNWKIHQIVFYCFCGIVAGMVGGLLGLGGGFILGPLFLELGIPPQVASATSTFAMTFSSSMSVVQYYLLDRFPVPYAAFFTLVATFAAFAGQHVVRKIIAVLGRASIIVFILALTIFVSAISLGGFGIENMVKKLKNQEYMGFENLC***
MIMGAAGSTVYYNLRLRHPTLDMPLIDYDLALLFQPMLMLGISIGVAFNVMFADWMVTVLLIILFIGTSTKALFKGIDTW************************************************IYWKELSLLLYVWLGFLAVQLAKEYVVPCSITYWILNALQVPIAVSVALFEAICLYKGTRVIASKGKEITNWKIHQIVFYCFCGIVAGMVGGLLGLGGGFILGPLFLELGIPPQVASATSTFAMTFSSSMSVVQYYLLDRFPVPYAAFFTLVATFAAFAGQHVVRKIIAVLGRASIIVFILALTIFVSAISLGGFGIENMVKKLKNQEYMGFENLCQ**
MIMGAAGSTVYYNLRLRHPTLDMPLIDYDLALLFQPMLMLGISIGVAFNVMFADWMVTVLLIILFIGTSTKALFKGIDTWKKETMMKKEAAKVLESESKAADVDGQDYKQLPSGPSTVHDEEVPIIKNIYWKELSLLLYVWLGFLAVQLAKEYVVPCSITYWILNALQVPIAVSVALFEAICLYKGTRVIASKGKEITNWKIHQIVFYCFCGIVAGMVGGLLGLGGGFILGPLFLELGIPPQVASATSTFAMTFSSSMSVVQYYLLDRFPVPYAAFFTLVATFAAFAGQHVVRKIIAVLGRASIIVFILALTIFVSAISLGGFGIENMVKKLKNQEYMGFENLCQIS
MIMGAAGSTVYYNLRLRHPTLDMPLIDYDLALLFQPMLMLGISIGVAFNVMFADWMVTVLLIILFIGTSTKALFKGIDTWKKETMMKKEAA*****************************EEVPIIKNIYWKELSLLLYVWLGFLAVQLAKEYVVPCSITYWILNALQVPIAVSVALFEAICLYKGTRVIASKGKEITNWKIHQIVFYCFCGIVAGMVGGLLGLGGGFILGPLFLELGIPPQVASATSTFAMTFSSSMSVVQYYLLDRFPVPYAAFFTLVATFAAFAGQHVVRKIIAVLGRASIIVFILALTIFVSAISLGGFGIENMVKKLKNQEYMGFENLCQ**
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii
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MIMGAAGSTVYYNLRLRHPTLDMPLIDYDLALLFQPMLMLGISIGVAFNVMFADWMVTVLLIILFIGTSTKALFKGIDTWKKETMMKKEAAKVLESESKAADVDGQDYKQLPSGPSTVHDEEVPIIKNIYWKELSLLLYVWLGFLAVQLAKEYVVPCSITYWILNALQVPIAVSVALFEAICLYKGTRVIASKGKEITNWKIHQIVFYCFCGIVAGMVGGLLGLGGGFILGPLFLELGIPPQVASATSTFAMTFSSSMSVVQYYLLDRFPVPYAAFFTLVATFAAFAGQHVVRKIIAVLGRASIIVFILALTIFVSAISLGGFGIENMVKKLKNQEYMGFENLCQIS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query347
255561190 478 conserved hypothetical protein [Ricinus 0.991 0.719 0.848 1e-158
224134334 477 predicted protein [Populus trichocarpa] 1.0 0.727 0.821 1e-154
224094753 454 predicted protein [Populus trichocarpa] 0.991 0.757 0.819 1e-153
356518101 491 PREDICTED: uncharacterized protein LOC10 1.0 0.706 0.770 1e-147
356509743 474 PREDICTED: uncharacterized protein LOC10 0.994 0.727 0.777 1e-146
356496755 470 PREDICTED: uncharacterized protein LOC10 0.988 0.729 0.795 1e-146
297735172 481 unnamed protein product [Vitis vinifera] 0.991 0.715 0.791 1e-143
388493882 473 unknown [Medicago truncatula] 0.982 0.720 0.773 1e-142
357518359 480 hypothetical protein MTR_8g077830 [Medic 0.982 0.710 0.764 1e-142
225430784 476 PREDICTED: uncharacterized protein LOC10 0.979 0.714 0.787 1e-141
>gi|255561190|ref|XP_002521607.1| conserved hypothetical protein [Ricinus communis] gi|223539285|gb|EEF40878.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  562 bits (1449), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 292/344 (84%), Positives = 313/344 (90%)

Query: 1   MIMGAAGSTVYYNLRLRHPTLDMPLIDYDLALLFQPMLMLGISIGVAFNVMFADWMVTVL 60
           MIMGAAGSTVYYN+RLRHPTLDMPLIDYDLALLFQPMLMLGISIGVAFNVMFADWMVTVL
Sbjct: 134 MIMGAAGSTVYYNMRLRHPTLDMPLIDYDLALLFQPMLMLGISIGVAFNVMFADWMVTVL 193

Query: 61  LIILFIGTSTKALFKGIDTWKKETMMKKEAAKVLESESKAADVDGQDYKQLPSGPSTVHD 120
           LIILFIGTSTKALFKGIDTWKKE+MMKKEAA+ LESESK  D +GQDYK LPSGP  + D
Sbjct: 194 LIILFIGTSTKALFKGIDTWKKESMMKKEAARQLESESKPNDGEGQDYKPLPSGPVALED 253

Query: 121 EEVPIIKNIYWKELSLLLYVWLGFLAVQLAKEYVVPCSITYWILNALQVPIAVSVALFEA 180
           EE+ + +NIYWKEL+LL+YVW+GFLAVQ+ K YV  CS+ YWILNALQVPIA SV LFEA
Sbjct: 254 EEISLFQNIYWKELALLVYVWVGFLAVQIVKSYVRTCSVAYWILNALQVPIAASVTLFEA 313

Query: 181 ICLYKGTRVIASKGKEITNWKIHQIVFYCFCGIVAGMVGGLLGLGGGFILGPLFLELGIP 240
           ICL KGTRVIAS+GKEITNWK HQI+ YC CGI+AGMVGGLLGLGGGFILGPLFLELGIP
Sbjct: 314 ICLRKGTRVIASRGKEITNWKYHQILLYCSCGIIAGMVGGLLGLGGGFILGPLFLELGIP 373

Query: 241 PQVASATSTFAMTFSSSMSVVQYYLLDRFPVPYAAFFTLVATFAAFAGQHVVRKIIAVLG 300
           PQVASATSTFAM FSSSMSVVQYYLL RFPVPYA FF LVAT AA  GQHVVRKIIA+LG
Sbjct: 374 PQVASATSTFAMVFSSSMSVVQYYLLKRFPVPYATFFVLVATVAALVGQHVVRKIIAILG 433

Query: 301 RASIIVFILALTIFVSAISLGGFGIENMVKKLKNQEYMGFENLC 344
           RASII+FILALTIFVSAISLGG GI +MV+KL N+EYMGFENLC
Sbjct: 434 RASIIIFILALTIFVSAISLGGVGIVDMVEKLTNEEYMGFENLC 477




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224134334|ref|XP_002327812.1| predicted protein [Populus trichocarpa] gi|222836897|gb|EEE75290.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224094753|ref|XP_002310222.1| predicted protein [Populus trichocarpa] gi|222853125|gb|EEE90672.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356518101|ref|XP_003527721.1| PREDICTED: uncharacterized protein LOC100789748 [Glycine max] gi|83853827|gb|ABC47859.1| membrane protein-like protein [Glycine max] Back     alignment and taxonomy information
>gi|356509743|ref|XP_003523605.1| PREDICTED: uncharacterized protein LOC100816633 [Glycine max] Back     alignment and taxonomy information
>gi|356496755|ref|XP_003517231.1| PREDICTED: uncharacterized protein LOC100801441 [Glycine max] Back     alignment and taxonomy information
>gi|297735172|emb|CBI17534.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|388493882|gb|AFK35007.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|357518359|ref|XP_003629468.1| hypothetical protein MTR_8g077830 [Medicago truncatula] gi|355523490|gb|AET03944.1| hypothetical protein MTR_8g077830 [Medicago truncatula] Back     alignment and taxonomy information
>gi|225430784|ref|XP_002267318.1| PREDICTED: uncharacterized protein LOC100253061 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query347
TAIR|locus:504956017476 AT2G25737 [Arabidopsis thalian 0.985 0.718 0.511 2.8e-89
TAIR|locus:2040605459 AT2G36630 [Arabidopsis thalian 0.979 0.740 0.367 3.2e-58
TAIR|locus:2200061367 AT1G11540 "AT1G11540" [Arabido 0.953 0.901 0.256 6.8e-24
TAIR|locus:2195773458 AT1G61740 [Arabidopsis thalian 0.495 0.375 0.287 2.7e-22
TAIR|locus:2127343449 AT4G21250 "AT4G21250" [Arabido 0.893 0.690 0.238 9.8e-18
TAIR|locus:2127348393 AT4G21260 "AT4G21260" [Arabido 0.149 0.132 0.423 4.6e-13
DICTYBASE|DDB_G0269644549 DDB_G0269644 [Dictyostelium di 0.224 0.142 0.358 7.6e-09
TAIR|locus:504956017 AT2G25737 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 891 (318.7 bits), Expect = 2.8e-89, P = 2.8e-89
 Identities = 179/350 (51%), Positives = 227/350 (64%)

Query:     1 MIMGAAGSTVYYNLRLRHPTLDMPLIDYDLALLFQPMLMLGISIGVAFNVMFADWMVTVL 60
             MIMGA+ STVYYNLRLRHPTLDMP+IDYDLALL QPMLMLGISIGVAFNV+F DW+VTVL
Sbjct:   127 MIMGASVSTVYYNLRLRHPTLDMPIIDYDLALLIQPMLMLGISIGVAFNVIFPDWLVTVL 186

Query:    61 LIILFIGTSTKALFKGIDXXXXXXXXXXXXXXVLESES-KAADVDGQDYKQLPSGPST-- 117
             LI+LF+GTSTKA  KG +               LES      +V+   Y  LP+ PST  
Sbjct:   187 LIVLFLGTSTKAFLKGSETWNKETIEKKEAAKRLESNGVSGTEVE---YVPLPAAPSTNP 243

Query:   118 --VHDEEVPIIKNIYWKELSLLLYVWLGFLAVQLAKEYVVPCSITYWILNALQVPIAVSV 175
                  EEV II+N+YWKEL LL++VW+ FLA+Q++K+ +  CS+ YW++N LQ+P+AV V
Sbjct:   244 GNKKKEEVSIIENVYWKELGLLVFVWIVFLALQISKQNLANCSVAYWVINLLQIPVAVGV 303

Query:   176 ALFEAICLYKGTRVIASKGKEITNWKIHQIVFYCFCGIVAGMVXXXXXXXXXXXXXXXXX 235
             + +EA+ LY+G R+IASKG+  +N+ + Q+V YC  GI+AG+V                 
Sbjct:   304 SGYEAVALYQGRRIIASKGQGDSNFTVGQLVMYCTFGIIAGIVGGLLGLGGGFIMGPLFL 363

Query:   236 XXXXXPQXXXXXXXXXXXXXXXXXXXQYYLLDRFPVPYXXXXXXXXXXXXXXGQHVVRKI 295
                  PQ                   +YYLL RFPVPY              GQHVVR++
Sbjct:   364 ELGVPPQVSSATATFAMTFSSSMSVVEYYLLKRFPVPYALYLVGVATIAAWVGQHVVRRL 423

Query:   296 IAVLGRASIIVFILALTIFVSAISLGGFGIENMVKKLKNQEYMGFENLCQ 345
             IA +GRAS+I+FILA  IF+SAISLGG GI NM+ K++  EYMGFENLC+
Sbjct:   424 IAAIGRASLIIFILASMIFISAISLGGVGIVNMIGKIQRHEYMGFENLCK 473




GO:0009507 "chloroplast" evidence=ISM
GO:0016021 "integral to membrane" evidence=IEA
TAIR|locus:2040605 AT2G36630 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2200061 AT1G11540 "AT1G11540" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2195773 AT1G61740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127343 AT4G21250 "AT4G21250" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127348 AT4G21260 "AT4G21260" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0269644 DDB_G0269644 [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query347
pfam01925236 pfam01925, TauE, Sulfite exporter TauE/SafE 4e-11
pfam01925236 pfam01925, TauE, Sulfite exporter TauE/SafE 2e-09
COG0730 258 COG0730, COG0730, Predicted permeases [General fun 6e-09
COG0730258 COG0730, COG0730, Predicted permeases [General fun 3e-07
>gnl|CDD|216790 pfam01925, TauE, Sulfite exporter TauE/SafE Back     alignment and domain information
 Score = 61.8 bits (151), Expect = 4e-11
 Identities = 27/108 (25%), Positives = 42/108 (38%)

Query: 208 YCFCGIVAGMVGGLLGLGGGFILGPLFLELGIPPQVASATSTFAMTFSSSMSVVQYYLLD 267
               G++AG + GL G GGG I  PL L L  PP VA  TS  A+  +S    + +    
Sbjct: 1   LLLAGLLAGFLAGLAGFGGGLIAVPLLLLLLGPPHVAVGTSLLAVIATSLSGALAHRRRG 60

Query: 268 RFPVPYAAFFTLVATFAAFAGQHVVRKIIAVLGRASIIVFILALTIFV 315
                      L     A  G  ++  +   + +    V +L   + +
Sbjct: 61  NVDWRLLLRLLLGGLLGALLGALLLLLLPGAVLKLLFGVLLLLAALLM 108


This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81. Length = 236

>gnl|CDD|216790 pfam01925, TauE, Sulfite exporter TauE/SafE Back     alignment and domain information
>gnl|CDD|223802 COG0730, COG0730, Predicted permeases [General function prediction only] Back     alignment and domain information
>gnl|CDD|223802 COG0730, COG0730, Predicted permeases [General function prediction only] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 347
COG0730258 Predicted permeases [General function prediction o 99.82
PRK10621266 hypothetical protein; Provisional 99.81
PF01925240 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002 99.76
PRK10621 266 hypothetical protein; Provisional 99.55
COG0730 258 Predicted permeases [General function prediction o 99.51
PF01925 240 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002 99.3
>COG0730 Predicted permeases [General function prediction only] Back     alignment and domain information
Probab=99.82  E-value=8.4e-19  Score=163.54  Aligned_cols=199  Identities=22%  Similarity=0.318  Sum_probs=161.4

Q ss_pred             chhHHHHHHHh-hhcCCCCCCCccchhHHHHHhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 019030            4 GAAGSTVYYNL-RLRHPTLDMPLIDYDLALLFQPMLMLGISIGVAFNVMFADWMVTVLLIILFIGTSTKALFKGIDTWKK   82 (347)
Q Consensus         4 g~sla~~i~~~-~~~hp~~~~plId~~l~l~l~P~~l~G~~iGv~ln~~~P~~ll~~l~~vlL~~~~~~~~~k~~~~~~~   82 (347)
                      |+++....++. .....|++|..+||+.+..+.+..++|+.+|+.+...+|+..+...+.+++.+.+.+++++.++ .++
T Consensus        48 ~t~l~~~~~~~~~~~~~~~k~~~v~~~~~~~l~~~~~~G~~lG~~l~~~~~~~~l~~~~~~~ll~~~~~~~~~~~~-~~~  126 (258)
T COG0730          48 GTSLLAVLFTSLSSALAYLKRGNVDWKLALILLLGALIGAFLGALLALLLPAELLKLLFGLLLLLLALYMLLGPRL-AKA  126 (258)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhccc-ccc
Confidence            45555555553 4555566777799999999999999999999999999999999999999999999999876221 000


Q ss_pred             HHHHHHHHHHhhhhhccccccccccccCCCCCCCCCCCCccchhccchhHHHHHHHHHHHHHHHHHHhhcCCCCcchHHH
Q 019030           83 ETMMKKEAAKVLESESKAADVDGQDYKQLPSGPSTVHDEEVPIIKNIYWKELSLLLYVWLGFLAVQLAKEYVVPCSITYW  162 (347)
Q Consensus        83 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~cs~~yw  162 (347)
                      |.                  .+               ++      ..||.                              
T Consensus       127 ~~------------------~~---------------~~------~~~~~------------------------------  137 (258)
T COG0730         127 ED------------------RA---------------AR------LRPLL------------------------------  137 (258)
T ss_pred             cc------------------cc---------------cc------cCcch------------------------------
Confidence            00                  00               00      11111                              


Q ss_pred             HHHHhhHHHHHHHHHHHHHHHHhhcccccccCccccchhhhHHHHHHHHHHHHHHHHhhccccchhhHHHHHH-hcCCCh
Q 019030          163 ILNALQVPIAVSVALFEAICLYKGTRVIASKGKEITNWKIHQIVFYCFCGIVAGMVGGLLGLGGGFILGPLFL-ELGIPP  241 (347)
Q Consensus       163 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~sgl~GiGGG~i~vP~L~-~~g~~~  241 (347)
                                                                .......|+++|+++|++|+|||...+|.+. ..+.|.
T Consensus       138 ------------------------------------------~~~~~~~g~~~G~~sG~~G~GgG~~~vp~l~~~~~~~~  175 (258)
T COG0730         138 ------------------------------------------FALALLIGFLAGFLSGLFGVGGGFGIVPALLLLLLLPL  175 (258)
T ss_pred             ------------------------------------------hHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhCch
Confidence                                                      0122467889999999999999999999996 568999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-hCCccHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 019030          242 QVASATSTFAMTFSSSMSVVQYYL-LDRFPVPYAAFFTLVATFAAFAGQHVVRKIIAVLGRASIIVFILALTIF  314 (347)
Q Consensus       242 ~~A~ats~~~~~~~s~~~~~~~~~-~g~v~~~~~l~l~~~~~iGa~~Ga~l~~~l~~~~l~~~~~v~ll~~~~~  314 (347)
                      +.+++||.+..++++..+...|.. .|++||.....+.+++++|+++|++++++++++.+|..+..+++...+.
T Consensus       176 ~~~~~ts~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~g~~~G~~lG~~l~~~~~~~~lr~~~~~~~~~~~~~  249 (258)
T COG0730         176 KLAVATSLAIILNTASNGAALYLFALGAVDWPLALLLAVGSILGAYLGARLARRLSPKVLRRLFALVLLAVAIK  249 (258)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999998 6999999988999999999999999999999999999998777766654



>PRK10621 hypothetical protein; Provisional Back     alignment and domain information
>PF01925 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002781 This family is found in integral membrane proteins of prokaryotes which are uncharacterised Back     alignment and domain information
>PRK10621 hypothetical protein; Provisional Back     alignment and domain information
>COG0730 Predicted permeases [General function prediction only] Back     alignment and domain information
>PF01925 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002781 This family is found in integral membrane proteins of prokaryotes which are uncharacterised Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00