Citrus Sinensis ID: 019052

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------
Protein Sequence
MADPNGHSWRDGMSSDNIKGLILALSSSIFIGSSFIVKKKGLKKAGASGVRAGFGGYSYLYEPLWWVGMITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPAEREIESVIEVWNLATEPAFLLYAALVITAVFILIFHYIPQYGQTHIMVYIGVCSLVGSLSVMSVKAIGIALKLTLSGMNQLIYPQTWAFTLIVIVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKTKDLGDGSSLTPSMSLRLSKHADDDDLESEGIPLRRQESLRTP
Secondary Structure (PSIPRED)
cccccccccccccccccHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHcccEEEEEEcccccccccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcccccccHHEEEHHHHHHccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccHHHcccccccEEEHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEEEEccEEEEEEcccccccccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHcHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
madpnghswrdgmssdNIKGLILALSSSIFIGSSFIVKKKglkkagasgvragfggysylyepLWWVGMITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSttivlhapaerEIESVIEVWNLATEPAFLLYAALVITAVFILIFHYIPQYGQTHIMVYIGVCSLVGSLSVMSVKAIGIALKLTLSgmnqliypqtwAFTLIVIVCVLTQMNYLNMALDtfntavvsPIYYVMFTSLTILASVIMfkdwdrqnptQIVTEMCGFVTILAGTFLLhktkdlgdgssltpsmslrlskhaddddlesegiplrrqeslrtp
Flexible Loop (DISEMBL)
madpnghswrdgMSSDNIKGLILALSSSIFIGSSFIVKKKGLKKAGASGVRAGFGGYSYLYEPLWWVGMITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPAEREIESVIEVWNLATEPAFLLYAALVITAVFILIFHYIPQYGQTHIMVYIGVCSLVGSLSVMSVKAIGIALKLTLSGMNQLIYPQTWAFTLIVIVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKTKDLGDGSSLTPSMSLRLSkhaddddlesegiplrrqeslrtp
Low Complexity Region (SEG)
MADPNGHSWRDGMSSDNIKglilalsssifigssfiVkkkglkkagaSGVRAGFGGYSYLYEPLWWVGMITMVVGEIanfaayafapaILVTPlgalsiiisaalahiilRERLHIFGILGCILCVVGSTTIVLHAPAEREIESVIEVWNLATEPAFLLYAALVITAVFILIFHYIPQYGQTHIMVYIGVCSLVGSLSVMSVKAIGIALKLTLSGMNQLIYPQTWAFTLIVIVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKTKDLGDGSSLTPSMSLRLSKHADDDDLESEGIPLRRQESLRTP
Disordered region (IsUnstruct)
*****************IKGLILALSSSIFIGSSFIVKKKGLKKAGASGVRAGFGGYSYLYEPLWWVGMITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPAEREIESVIEVWNLATEPAFLLYAALVITAVFILIFHYIPQYGQTHIMVYIGVCSLVGSLSVMSVKAIGIALKLTLSGMNQLIYPQTWAFTLIVIVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKT******************************************
Disordered Region (DISOPRED)
***************DNIKGLILALSSSIFIGSSFIVKKKGLK***********G*YSYLYEPLWWVGMITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHA**********EVWNLATEPAFLLYAALVITAVFILIFHYIPQYGQTHIMVYIGVCSLVGSLSVMSVKAIGIALKLTLSGMNQLIYPQTWAFTLIVIVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLL*********************************************
Disordered Region (DISEMBL)
**********DGMSSDNIKGLILALSSSIFIGSSFIVKK********SGVRAGFGGYSYLYEPLWWVGMITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPAEREIESVIEVWNLATEPAFLLYAALVITAVFILIFHYIPQYGQTHIMVYIGVCSLVGSLSVMSVKAIGIALKLTLSGMNQLIYPQTWAFTLIVIVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKTKDLGDGSSLTPSMSLRLSK********SEGIPLR********
Disordered Region (DISPRO)
************MSSDNIKGLILALSSSIFIGSSFIVKKKGLKKAGASGVRAGFGGYSYLYEPLWWVGMITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPAEREIESVIEVWNLATEPAFLLYAALVITAVFILIFHYIPQYGQTHIMVYIGVCSLVGSLSVMSVKAIGIALKLTLSGMNQLIYPQTWAFTLIVIVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKTKDL***************************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MADPNGHSWRDGMSSDNIKGLILALSSSIFIGSSFIVKKKGLKKAGASGVRAGFGGYSYLYEPLWWVGMITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPAEREIESVIEVWNLATEPAFLLYAALVITAVFILIFHYIPQYGQTHIMVYIGVCSLVGSLSVMSVKAIGIALKLTLSGMNQLIYPQTWAFTLIVIVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKTKDLGDGSSLTPSMSLRLSKHADDDDLESEGIPLRRQESLRTP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	347	2.2.26 [Sep-21-2011]
Q3SWX0	360	Magnesium transporter NIP	yes	no	0.930	0.897	0.495	9e-83
Q5R7Q3	360	Magnesium transporter NIP	yes	no	0.930	0.897	0.486	4e-82
Q8N8Q9	360	Magnesium transporter NIP	yes	no	0.930	0.897	0.486	4e-82
Q9JJC8	359	Magnesium transporter NIP	yes	no	0.930	0.899	0.476	4e-81
Q0D2K0	466	Magnesium transporter NIP	no	no	0.899	0.669	0.450	8e-74
Q8BZF2	406	Magnesium transporter NIP	no	no	0.832	0.711	0.458	1e-72
Q8BMW7	416	Magnesium transporter NIP	no	no	0.824	0.687	0.515	3e-68
Q5RDB8	410	Magnesium transporter NIP	no	no	0.829	0.702	0.515	5e-61
Q6NVV3	410	Magnesium transporter NIP	no	no	0.829	0.702	0.508	1e-59
Q7RTP0	329	Magnesium transporter NIP	no	no	0.812	0.857	0.381	2e-50

>sp|Q3SWX0|NIPA2_BOVIN Magnesium transporter NIPA2 OS=Bos taurus GN=NIPA2 PE=2 SV=1

 Score =  307 bits (786), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 161/325 (49%), Positives = 220/325 (67%), Gaps = 2/325 (0%)

Query: 20  GLILALSSSIFIGSSFIVKKKGLKKAGASG-VRAGFGGYSYLYEPLWWVGMITMVVGEIA 78
           GL LA+SSSIFIG SFI+KKKGL +    G  RAG GG++YL E LWW G+++M  GE+A
Sbjct: 13  GLGLAMSSSIFIGGSFILKKKGLLRLARKGSTRAGQGGHAYLKEWLWWAGLLSMGAGEVA 72

Query: 79  NFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPA 138
           NFAAYAFAPA LVTPLGALS+++SA L+   L ERL++ G +GC+L ++GST +V+HAP 
Sbjct: 73  NFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAPK 132

Query: 139 EREIESVIEVWNLATEPAFLLYAALVITAVFILIFHYIPQYGQTHIMVYIGVCSLVGSLS 198
           E EIE++ E+ +   +P F+++A LV+    ILIF   P++GQT+I+VYI +CS++G++S
Sbjct: 133 EEEIETLNEMSHKLGDPGFVVFATLVVIVSLILIFVVGPRHGQTNILVYITICSVIGAVS 192

Query: 199 VMSVKAIGIALKLTLSGMNQLIYPQTWAFTLIVIVCVLTQMNYLNMALDTFNTAVVSPIY 258
           V   K +GIA+K   +G   L +P TW   L +IVCV TQ+NYLN ALD FNT++V+PIY
Sbjct: 193 VSCAKGLGIAIKELFAGKPVLQHPLTWILLLSLIVCVSTQINYLNRALDIFNTSIVTPIY 252

Query: 259 YVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKTKDLGDGSSLTPSM 318
           YV FT+  I  S I+FK+W       ++  + GF TI+ G FLLH  KD+    S  P +
Sbjct: 253 YVFFTTSVITCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKDVSFSLSSLP-V 311

Query: 319 SLRLSKHADDDDLESEGIPLRRQES 343
           S R  + A +  L S    L   E 
Sbjct: 312 SFRKDEKAVNGSLSSMYEVLNNNEE 336

Acts as a selective Mg(2+) transporter.
Bos taurus (taxid: 9913)

>sp|Q5R7Q3|NIPA2_PONAB Magnesium transporter NIPA2 OS=Pongo abelii GN=NIPA2 PE=2 SV=1

 Score =  305 bits (780), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 158/325 (48%), Positives = 221/325 (68%), Gaps = 2/325 (0%)

Query: 20  GLILALSSSIFIGSSFIVKKKGLKKAGASG-VRAGFGGYSYLYEPLWWVGMITMVVGEIA 78
           GL LA+SSSIFIG SFI+KKKGL +    G +RAG GG++YL E LWW G+++M  GE+A
Sbjct: 13  GLGLAMSSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLLSMGAGEVA 72

Query: 79  NFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPA 138
           NFAAYAFAPA LVTPLGALS+++SA L+   L ERL++ G +GC+L ++GST +V+HAP 
Sbjct: 73  NFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAPK 132

Query: 139 EREIESVIEVWNLATEPAFLLYAALVITAVFILIFHYIPQYGQTHIMVYIGVCSLVGSLS 198
           E EIE++ E+ +   +P F+++A LV+    ILIF   P++GQT+I+VYI +CS++G+ S
Sbjct: 133 EEEIETLNEMSHKLGDPGFVVFATLVVIVALILIFVVGPRHGQTNILVYITICSVIGAFS 192

Query: 199 VMSVKAIGIALKLTLSGMNQLIYPQTWAFTLIVIVCVLTQMNYLNMALDTFNTAVVSPIY 258
           V  VK +GIA+K   +G   L +P  W   L +IVCV TQ+NYLN ALD FNT++V+PIY
Sbjct: 193 VSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCVSTQINYLNRALDIFNTSIVTPIY 252

Query: 259 YVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKTKDLGDGSSLTPSM 318
           YV FT+  +  S I+FK+W       ++  + GF TI+ G FLLH  KD+    +  P +
Sbjct: 253 YVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKDVSFSLASLP-V 311

Query: 319 SLRLSKHADDDDLESEGIPLRRQES 343
           S R  + A + +L +    L   E 
Sbjct: 312 SFRKDEKAMNGNLSNMYEVLNNNEE 336

Acts as a selective Mg(2+) transporter.

Pongo abelii (taxid: 9601)

>sp|Q8N8Q9|NIPA2_HUMAN Magnesium transporter NIPA2 OS=Homo sapiens GN=NIPA2 PE=2 SV=1

 Score =  305 bits (780), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 158/325 (48%), Positives = 221/325 (68%), Gaps = 2/325 (0%)

Query: 20  GLILALSSSIFIGSSFIVKKKGLKKAGASG-VRAGFGGYSYLYEPLWWVGMITMVVGEIA 78
           GL LA+SSSIFIG SFI+KKKGL +    G +RAG GG++YL E LWW G+++M  GE+A
Sbjct: 13  GLGLAMSSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLLSMGAGEVA 72

Query: 79  NFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPA 138
           NFAAYAFAPA LVTPLGALS+++SA L+   L ERL++ G +GC+L ++GST +V+HAP 
Sbjct: 73  NFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAPK 132

Query: 139 EREIESVIEVWNLATEPAFLLYAALVITAVFILIFHYIPQYGQTHIMVYIGVCSLVGSLS 198
           E EIE++ E+ +   +P F+++A LV+    ILIF   P++GQT+I+VYI +CS++G+ S
Sbjct: 133 EEEIETLNEMSHKLGDPGFVVFATLVVIVALILIFVVGPRHGQTNILVYITICSVIGAFS 192

Query: 199 VMSVKAIGIALKLTLSGMNQLIYPQTWAFTLIVIVCVLTQMNYLNMALDTFNTAVVSPIY 258
           V  VK +GIA+K   +G   L +P  W   L +IVCV TQ+NYLN ALD FNT++V+PIY
Sbjct: 193 VSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCVSTQINYLNRALDIFNTSIVTPIY 252

Query: 259 YVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKTKDLGDGSSLTPSM 318
           YV FT+  +  S I+FK+W       ++  + GF TI+ G FLLH  KD+    +  P +
Sbjct: 253 YVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKDVSFSLASLP-V 311

Query: 319 SLRLSKHADDDDLESEGIPLRRQES 343
           S R  + A + +L +    L   E 
Sbjct: 312 SFRKDEKAMNGNLSNMYEVLNNNEE 336

Acts as a selective Mg(2+) transporter.

Homo sapiens (taxid: 9606)

>sp|Q9JJC8|NIPA2_MOUSE Magnesium transporter NIPA2 OS=Mus musculus GN=Nipa2 PE=1 SV=1

 Score =  301 bits (771), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 155/325 (47%), Positives = 219/325 (67%), Gaps = 2/325 (0%)

Query: 20  GLILALSSSIFIGSSFIVKKKGLKKAGASG-VRAGFGGYSYLYEPLWWVGMITMVVGEIA 78
           GL LA++SSIFIG SFI+KKKGL +    G +RAG GG++YL E LWW G+++M  GE+A
Sbjct: 13  GLGLAMTSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLLSMGAGEVA 72

Query: 79  NFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPA 138
           NFAAYAFAPA LVTPLGALS+++SA L+   L ERL++ G +GC+L ++GST +V+HAP 
Sbjct: 73  NFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAPK 132

Query: 139 EREIESVIEVWNLATEPAFLLYAALVITAVFILIFHYIPQYGQTHIMVYIGVCSLVGSLS 198
           E EIE++ E+ +   +P F+++A  V+    I IF   P++GQT+I+VYI +CS++G+ S
Sbjct: 133 EEEIETLNEMSHKLGDPGFVVFATFVVIVALIFIFVVGPRHGQTNILVYITICSVIGAFS 192

Query: 199 VMSVKAIGIALKLTLSGMNQLIYPQTWAFTLIVIVCVLTQMNYLNMALDTFNTAVVSPIY 258
           V  VK +GIA+K  L+G   L +P  W     ++VCV TQ+NYLN ALD FNT++V+PIY
Sbjct: 193 VSCVKGLGIAIKELLAGKPVLQHPLAWILLFSLVVCVSTQINYLNRALDIFNTSIVTPIY 252

Query: 259 YVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKTKDLGDGSSLTPSM 318
           YV FT+  +  S I+FK+W       ++  + GF TI+ G FLLH  KD+    +  P +
Sbjct: 253 YVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKDVSFSLASLP-V 311

Query: 319 SLRLSKHADDDDLESEGIPLRRQES 343
           S R  + A + +L S    L   E 
Sbjct: 312 SFRKDEKAMNGNLSSMYEVLNNNED 336

Acts as a selective Mg(2+) transporter.

Mus musculus (taxid: 10090)

>sp|Q0D2K0|NIPA4_HUMAN Magnesium transporter NIPA4 OS=Homo sapiens GN=NIPAL4 PE=1 SV=3

 Score =  277 bits (709), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 142/315 (45%), Positives = 213/315 (67%), Gaps = 3/315 (0%)

Query: 7   HSWRDGMSSDN--IKGLILALSSSIFIGSSFIVKKKGLKKAGASG-VRAGFGGYSYLYEP 63
           HSW++ +  +     GL LA  SS  IGSS I+KKKGL +  A+G  RA  GG+ YL + 
Sbjct: 106 HSWQERIRQNYGFYIGLGLAFLSSFLIGSSVILKKKGLLRLVATGATRAVDGGFGYLKDA 165

Query: 64  LWWVGMITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCI 123
           +WW G +TM  GE+ANF AYAFAPA +VTPLGALS++ISA L+   LRE L++ G LGC+
Sbjct: 166 MWWAGFLTMAAGEVANFGAYAFAPATVVTPLGALSVLISAILSSYFLRESLNLLGKLGCV 225

Query: 124 LCVVGSTTIVLHAPAEREIESVIEVWNLATEPAFLLYAALVITAVFILIFHYIPQYGQTH 183
           +CV GST +V+HAP E ++ +++E+ +   +  F+++A L++ +  ILIF   P+YGQ +
Sbjct: 226 ICVAGSTVMVIHAPEEEKVTTIMEMASKMKDTGFIVFAVLLLVSCLILIFVIAPRYGQRN 285

Query: 184 IMVYIGVCSLVGSLSVMSVKAIGIALKLTLSGMNQLIYPQTWAFTLIVIVCVLTQMNYLN 243
           I++YI +CS++G+ SV +VK +GI +K    G+  + +P  +  +LI+ + + TQ+N+LN
Sbjct: 286 ILIYIIICSVIGAFSVAAVKGLGITIKNFFQGLPVVRHPLPYILSLILALSLSTQVNFLN 345

Query: 244 MALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLH 303
            ALD FNT++V PIYYV FT++ + +S+I+FK+W   +   I   + GFVTI+ G F+LH
Sbjct: 346 RALDIFNTSLVFPIYYVFFTTVVVTSSIILFKEWYSMSAVDIAGTLSGFVTIILGVFMLH 405

Query: 304 KTKDLGDGSSLTPSM 318
             KDL    +  P M
Sbjct: 406 AFKDLDISCASLPHM 420

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Ba(2+), Mn(2+), Sr(2+) and Co(2+) but to a much less extent than Mg(2+) (By similarity). May be a receptor for ligands (trioxilins A3 and B3) from the hepoxilin pathway.

Homo sapiens (taxid: 9606)

>sp|Q8BZF2|NIPA4_MOUSE Magnesium transporter NIPA4 OS=Mus musculus GN=Nipal4 PE=1 SV=1

 Score =  273 bits (698), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 133/290 (45%), Positives = 201/290 (69%), Gaps = 1/290 (0%)

Query: 20  GLILALSSSIFIGSSFIVKKKGLKKAGASG-VRAGFGGYSYLYEPLWWVGMITMVVGEIA 78
           G+ LA  S   IG+S I+KKKGL +  A+G  RA  GGY YL +P+WW GM TM  GE+A
Sbjct: 61  GVGLAFLSCFLIGTSVILKKKGLIRLVATGATRAVNGGYGYLKDPMWWAGMATMSAGEVA 120

Query: 79  NFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPA 138
           NF AYAFAPA +VTPLGALS++ISA  +   L E L++ G LGC++C+ GST +V+HAP 
Sbjct: 121 NFGAYAFAPATVVTPLGALSVLISAIFSSYCLGESLNLLGKLGCVICMAGSTVMVIHAPK 180

Query: 139 EREIESVIEVWNLATEPAFLLYAALVITAVFILIFHYIPQYGQTHIMVYIGVCSLVGSLS 198
           E ++ +V E+ +   +  F+++A L++ +  ILIF   P+YGQ +I++YI +CS++GS S
Sbjct: 181 EEKVTTVAEMASKMKDTGFIVFAVLLVVSCLILIFIVAPRYGQRNILIYIIICSVIGSFS 240

Query: 199 VMSVKAIGIALKLTLSGMNQLIYPQTWAFTLIVIVCVLTQMNYLNMALDTFNTAVVSPIY 258
           V +VK +G+ ++    G+  + +P  +  +LI+ + ++ Q+N+LN ALD FNT++V PIY
Sbjct: 241 VTAVKGLGVTIRNFFQGLPVVRHPLPYILSLILGLSIIIQVNFLNRALDIFNTSLVFPIY 300

Query: 259 YVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKTKDL 308
           YV FT++ + +S+++FK+W   +   IV  + GFVTI+ G F+LH  KDL
Sbjct: 301 YVFFTTVVVASSIVLFKEWYTMSAVDIVGTLSGFVTIILGVFMLHAFKDL 350

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Ba(2+), Mn(2+), Sr(2+) and Co(2+) but to a much less extent than Mg(2+). May be a receptor for ligands (trioxilins A3 and B3) from the hepoxilin pathway.

Mus musculus (taxid: 10090)

>sp|Q8BMW7|NIPA3_MOUSE Magnesium transporter NIPA3 OS=Mus musculus GN=Nipal1 PE=1 SV=2

 Score =  259 bits (661), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 150/291 (51%), Positives = 203/291 (69%), Gaps = 5/291 (1%)

Query: 20  GLILALSSSIFIGSSFIVKKKGLKKAGASGV-RAGFGGYSYLYEPLWWVGMITMVVGEIA 78
           GL+LA+SSS+FIGSSFI+KKKGL +    G+ RAG GG+SYL E LWW G+++M  GE A
Sbjct: 71  GLVLAISSSVFIGSSFILKKKGLLQLADKGITRAGQGGHSYLKEWLWWAGLLSMGAGEAA 130

Query: 79  NFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPA 138
           NFAAYAFAPA LVTPLGALS++ISA L+   L ERL+I G +GCIL V+GST +V+HAP 
Sbjct: 131 NFAAYAFAPATLVTPLGALSVLISAILSSYFLNERLNIHGKIGCILSVLGSTVMVIHAPQ 190

Query: 139 EREIESVIEVWNLATEPAFLLYAALVITAVFILIFHYIPQYGQTHIMVYIGVCSLVGSLS 198
           E E+ S+ E+     +P F+ +A ++     +LI    P+ GQT+I+VYI +CSL+G+ S
Sbjct: 191 EGEVTSLHEMEMKLRDPGFVSFAVIISVISLVLILIVAPKKGQTNILVYIAICSLIGAFS 250

Query: 199 VMSVKAIGIALKLTLSGMNQLIYPQTWAFTLIVIVC--VLTQMNYLNMALDTFNTAVVSP 256
           V SVK +GIA+K  L    + +Y     F L+ ++   V TQ+NYLN ALDTFNT++V+P
Sbjct: 251 VSSVKGLGIAIKELLE--RKPVYKDPLFFILLTMLALSVTTQINYLNKALDTFNTSLVTP 308

Query: 257 IYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKTKD 307
           IYYV FTS+ +  S I+F++W       I+  + GF TI+ G FLLH  K+
Sbjct: 309 IYYVFFTSMVVTCSAILFQEWYGMKAGDIIGTLSGFFTIINGIFLLHAFKN 359

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+), Cu(2+) and Co(2+) but to a much less extent than Mg(2+).

Mus musculus (taxid: 10090)

>sp|Q5RDB8|NIPA3_PONAB Magnesium transporter NIPA3 OS=Pongo abelii GN=NIPAL1 PE=2 SV=1

 Score =  234 bits (598), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 149/289 (51%), Positives = 204/289 (70%), Gaps = 1/289 (0%)

Query: 20  GLILALSSSIFIGSSFIVKKKGLKKAGASGV-RAGFGGYSYLYEPLWWVGMITMVVGEIA 78
           GL+LA+SSSIFIGSSFI+KKKGL +  + G+ RAG GG+SYL E LWWVG+++M VGE A
Sbjct: 71  GLVLAVSSSIFIGSSFILKKKGLLQLASKGITRAGQGGHSYLKEWLWWVGLLSMGVGEAA 130

Query: 79  NFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPA 138
           NFAAYAFAPA LVTPLGALS++ISA L+   L E L+I G +GCIL ++GST +V+HAP 
Sbjct: 131 NFAAYAFAPATLVTPLGALSVLISAILSSYFLNEHLNIHGKIGCILSILGSTVMVIHAPQ 190

Query: 139 EREIESVIEVWNLATEPAFLLYAALVITAVFILIFHYIPQYGQTHIMVYIGVCSLVGSLS 198
           E E+ S+ E+     +P F+ +A +V     +LI    P+ GQT+I+VYI +CSL+G+ S
Sbjct: 191 EEEVTSLHEMEMKLRDPGFISFAVIVTVISLVLILIVAPKKGQTNILVYISICSLIGAFS 250

Query: 199 VMSVKAIGIALKLTLSGMNQLIYPQTWAFTLIVIVCVLTQMNYLNMALDTFNTAVVSPIY 258
           V SVK +GIA+K  +       +P  +    ++++ V TQ+NYLN ALDTFNT++V+PIY
Sbjct: 251 VSSVKGLGIAIKELIEWKPVYKHPLVFVLLAVLVLSVTTQINYLNKALDTFNTSIVTPIY 310

Query: 259 YVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKTKD 307
           YV FTS+ +  S I+F++W       I+  + GF TI+ G FLLH  K+
Sbjct: 311 YVFFTSMVVTCSAILFQEWYGMTAGDIIGTLSGFFTIIIGIFLLHAFKN 359

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+), Cu(2+) and Co(2+) but to a much less extent than Mg(2+).

Pongo abelii (taxid: 9601)

>sp|Q6NVV3|NIPA3_HUMAN Magnesium transporter NIPA3 OS=Homo sapiens GN=NIPAL1 PE=2 SV=1

 Score =  230 bits (587), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 147/289 (50%), Positives = 202/289 (69%), Gaps = 1/289 (0%)

Query: 20  GLILALSSSIFIGSSFIVKKKGLKKAGASG-VRAGFGGYSYLYEPLWWVGMITMVVGEIA 78
           GL+LA+SSSIFIGSSFI+KKKGL +  + G  RAG GG+SYL E LWWVG+++M  GE A
Sbjct: 71  GLVLAVSSSIFIGSSFILKKKGLLQLASKGFTRAGQGGHSYLKEWLWWVGLLSMGAGEAA 130

Query: 79  NFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPA 138
           NFAAYAFAPA LVTPLGALS++ISA L+   L E L+I G +GCIL ++GST +V+HAP 
Sbjct: 131 NFAAYAFAPATLVTPLGALSVLISAILSSYFLNEHLNIHGKIGCILSILGSTVMVIHAPQ 190

Query: 139 EREIESVIEVWNLATEPAFLLYAALVITAVFILIFHYIPQYGQTHIMVYIGVCSLVGSLS 198
           E E+ S+ E+     +P F+ +A ++     +LI    P+ GQT+I+VYI +CSL+G+ S
Sbjct: 191 EEEVTSLHEMEMKLRDPGFISFAVIITVISLVLILIVAPKKGQTNILVYISICSLIGAFS 250

Query: 199 VMSVKAIGIALKLTLSGMNQLIYPQTWAFTLIVIVCVLTQMNYLNMALDTFNTAVVSPIY 258
           V SVK +GIA+K  +       +P  +    ++++ V TQ+NYLN ALDTFNT++V+PIY
Sbjct: 251 VSSVKGLGIAIKELIEWKPVYKHPLVFVLLAVLVLSVTTQINYLNKALDTFNTSLVTPIY 310

Query: 259 YVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKTKD 307
           YV FTS+ +  S I+F++W       I+  + GF TI+ G FLLH  K+
Sbjct: 311 YVFFTSMVVTCSAILFQEWYGMTAGDIIGTLSGFFTIIIGIFLLHAFKN 359

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+), Cu(2+) and Co(2+) but to a much less extent than Mg(2+).

Homo sapiens (taxid: 9606)

>sp|Q7RTP0|NIPA1_HUMAN Magnesium transporter NIPA1 OS=Homo sapiens GN=NIPA1 PE=1 SV=1

 Score =  199 bits (506), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 111/291 (38%), Positives = 169/291 (58%), Gaps = 9/291 (3%)

Query: 20  GLILALSSSIFIGSSFIVKKKGLKKAGASGVRAGFGGYSYLYEPLWWVGMITMVVGEIAN 79
           GL +A+ SS+  GS+F+++KKG+       VRA   G SYL + +WW G I M VG+I N
Sbjct: 31  GLGVAVVSSLVNGSTFVLQKKGI-------VRAKRRGTSYLTDIVWWAGTIAMAVGQIGN 83

Query: 80  FAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPAE 139
           F AY   P +LVTPLGAL +   + LA  +L+E+L+I G LGC+L   GS  +++H+P  
Sbjct: 84  FLAYTAVPTVLVTPLGALGVPFGSILASYLLKEKLNILGKLGCLLSCAGSVVLIIHSPKS 143

Query: 140 REIESVIEVWNLATEPAFLLYAALVITAVFILIFHYIPQYGQTHIMVYIGVCSLVGSLSV 199
             + +  E+    T P F+ Y  +V+  + +LIF   P +G T+IMVYI +CSL+GS +V
Sbjct: 144 ESVTTQAELEEKLTNPVFVGYLCIVLLMLLLLIFWIAPAHGPTNIMVYISICSLLGSFTV 203

Query: 200 MSVKAIGIALKLTLSG--MNQLIYPQTWAFTLIVIVCVLTQMNYLNMALDTFNTAVVSPI 257
            S K IG+A +  L     +Q           ++   ++ Q  Y+N AL+ F+++V   I
Sbjct: 204 PSTKGIGLAAQDILHNNPSSQRALCLCLVLLAVLGCSIIVQFRYINKALECFDSSVFGAI 263

Query: 258 YYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKTKDL 308
           YYV+FT+L +LAS I+F++W        +   CGF T+  G  L+   K+ 
Sbjct: 264 YYVVFTTLVLLASAILFREWSNVGLVDFLGMACGFTTVSVGIVLIQVFKEF 314

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+) and Co(2+) but to a much less extent than Mg(2+).

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	347
359486259	347	PREDICTED: magnesium transporter NIPA2 [	0.988	0.988	0.858	1e-166
297739546	333	unnamed protein product [Vitis vinifera]	0.959	1.0	0.880	1e-165
147855843	351	hypothetical protein VITISV_002232 [Viti	0.988	0.977	0.845	1e-163
356543405	350	PREDICTED: magnesium transporter NIPA2-l	0.971	0.962	0.855	1e-163
255576223	345	Non-imprinted in Prader-Willi/Angelman s	0.971	0.976	0.862	1e-163
255571788	340	Non-imprinted in Prader-Willi/Angelman s	0.971	0.991	0.823	1e-162
449495529	346	PREDICTED: magnesium transporter NIPA2-l	0.994	0.997	0.864	1e-162
356560745	347	PREDICTED: magnesium transporter NIPA2-l	0.971	0.971	0.85	1e-162
388492250	349	unknown [Lotus japonicus]	0.988	0.982	0.834	1e-161
357445353	341	Magnesium transporter NIPA2 [Medicago tr	0.979	0.997	0.832	1e-160

>gi|359486259|ref|XP_002264759.2| PREDICTED: magnesium transporter NIPA2 [Vitis vinifera]

 Score =  588 bits (1517), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 297/346 (85%), Positives = 322/346 (93%), Gaps = 3/346 (0%)

Query: 2   ADPNGHSWRDGMSSDNIKGLILALSSSIFIGSSFIVKKKGLKKAGASGVRAGFGGYSYLY 61
            +   +S++ GMS+DNIKGL+LALSSS FIG+SFIVKKKGLKKAGASG+RAG GGYSYLY
Sbjct: 5   GEEGAYSYK-GMSADNIKGLVLALSSSFFIGASFIVKKKGLKKAGASGIRAGVGGYSYLY 63

Query: 62  EPLWWVGMITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILG 121
           EPLWWVGMITM+VGEIANFAAYAFAPAILVTPLGALSIIISA LAHIILRE+LHIFGILG
Sbjct: 64  EPLWWVGMITMIVGEIANFAAYAFAPAILVTPLGALSIIISAVLAHIILREKLHIFGILG 123

Query: 122 CILCVVGSTTIVLHAPAEREIESVIEVWNLATEPAFLLYAALVITAVFILIFHYIPQYGQ 181
           C+LCVVGSTTIVLHAP EREI+SVIEVW+LATEPAFL YAALVITAVF+LI H+IPQYGQ
Sbjct: 124 CVLCVVGSTTIVLHAPQEREIQSVIEVWDLATEPAFLFYAALVITAVFVLIIHFIPQYGQ 183

Query: 182 THIMVYIGVCSLVGSLSVMSVKAIGIALKLTLSGMNQLIYPQTWAFTLIVIVCVLTQMNY 241
           THIMVYIGVCSLVGSLSVMSVKA+GIALKLTLSGMNQL YPQTWAFT++VI CV+TQMNY
Sbjct: 184 THIMVYIGVCSLVGSLSVMSVKALGIALKLTLSGMNQLTYPQTWAFTIVVITCVITQMNY 243

Query: 242 LNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFL 301
           LN ALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTIL+GTFL
Sbjct: 244 LNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILSGTFL 303

Query: 302 LHKTKDLGDGSSLTPSMSLRLSKHADDDDLESEGIPLRRQESLRTP 347
           LHKTKDL DG  L+ S+S+RLSKH ++D    EGIPLRRQESLR P
Sbjct: 304 LHKTKDLSDG--LSTSLSMRLSKHIEEDGFGQEGIPLRRQESLRLP 347

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297739546|emb|CBI29728.3| unnamed protein product [Vitis vinifera]

 Score =  585 bits (1509), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 295/335 (88%), Positives = 316/335 (94%), Gaps = 2/335 (0%)

Query: 13  MSSDNIKGLILALSSSIFIGSSFIVKKKGLKKAGASGVRAGFGGYSYLYEPLWWVGMITM 72
           MS+DNIKGL+LALSSS FIG+SFIVKKKGLKKAGASG+RAG GGYSYLYEPLWWVGMITM
Sbjct: 1   MSADNIKGLVLALSSSFFIGASFIVKKKGLKKAGASGIRAGVGGYSYLYEPLWWVGMITM 60

Query: 73  VVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTI 132
           +VGEIANFAAYAFAPAILVTPLGALSIIISA LAHIILRE+LHIFGILGC+LCVVGSTTI
Sbjct: 61  IVGEIANFAAYAFAPAILVTPLGALSIIISAVLAHIILREKLHIFGILGCVLCVVGSTTI 120

Query: 133 VLHAPAEREIESVIEVWNLATEPAFLLYAALVITAVFILIFHYIPQYGQTHIMVYIGVCS 192
           VLHAP EREI+SVIEVW+LATEPAFL YAALVITAVF+LI H+IPQYGQTHIMVYIGVCS
Sbjct: 121 VLHAPQEREIQSVIEVWDLATEPAFLFYAALVITAVFVLIIHFIPQYGQTHIMVYIGVCS 180

Query: 193 LVGSLSVMSVKAIGIALKLTLSGMNQLIYPQTWAFTLIVIVCVLTQMNYLNMALDTFNTA 252
           LVGSLSVMSVKA+GIALKLTLSGMNQL YPQTWAFT++VI CV+TQMNYLN ALDTFNTA
Sbjct: 181 LVGSLSVMSVKALGIALKLTLSGMNQLTYPQTWAFTIVVITCVITQMNYLNKALDTFNTA 240

Query: 253 VVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKTKDLGDGS 312
           VVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTIL+GTFLLHKTKDL DG 
Sbjct: 241 VVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILSGTFLLHKTKDLSDG- 299

Query: 313 SLTPSMSLRLSKHADDDDLESEGIPLRRQESLRTP 347
            L+ S+S+RLSKH ++D    EGIPLRRQESLR P
Sbjct: 300 -LSTSLSMRLSKHIEEDGFGQEGIPLRRQESLRLP 333

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147855843|emb|CAN81783.1| hypothetical protein VITISV_002232 [Vitis vinifera]

 Score =  581 bits (1498), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 296/350 (84%), Positives = 322/350 (92%), Gaps = 7/350 (2%)

Query: 2   ADPNGHSWRDGMSSDNIKGLILALSSSIFIGSSFIVKKKGLKKAGASGVRAGFGGYSYLY 61
            +   +S++ GMS+DNIKGL+LALSSS FIG+SFIVKKKGLKKAGASG+RAG GGYSYLY
Sbjct: 5   GEEGAYSYK-GMSADNIKGLVLALSSSFFIGASFIVKKKGLKKAGASGIRAGVGGYSYLY 63

Query: 62  EPLWWVGMITMVVGEIANFAAYAFAPAILVTPLGALSIII----SAALAHIILRERLHIF 117
           EPLWWVGMITM+VGEIANFAAYAFAPAILVTPLGALSIII    +A LAHIILRE+LHIF
Sbjct: 64  EPLWWVGMITMIVGEIANFAAYAFAPAILVTPLGALSIIIRHDSNAVLAHIILREKLHIF 123

Query: 118 GILGCILCVVGSTTIVLHAPAEREIESVIEVWNLATEPAFLLYAALVITAVFILIFHYIP 177
           GILGC+LCVVGSTTIVLHAP EREI+SVIEVW+LATEPAFL YAALVITAVF+LI H+IP
Sbjct: 124 GILGCVLCVVGSTTIVLHAPQEREIQSVIEVWDLATEPAFLFYAALVITAVFVLIIHFIP 183

Query: 178 QYGQTHIMVYIGVCSLVGSLSVMSVKAIGIALKLTLSGMNQLIYPQTWAFTLIVIVCVLT 237
           QYGQTHIMVYIGVCSLVGSLSVMSVKA+GIALKLTLSGMNQL YPQTWAFT++VI CV+T
Sbjct: 184 QYGQTHIMVYIGVCSLVGSLSVMSVKALGIALKLTLSGMNQLTYPQTWAFTIVVITCVIT 243

Query: 238 QMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILA 297
           QMNYLN ALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTIL+
Sbjct: 244 QMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILS 303

Query: 298 GTFLLHKTKDLGDGSSLTPSMSLRLSKHADDDDLESEGIPLRRQESLRTP 347
           GTFLLHKTKDL DG  L+ S+S+RLSKH ++D    EGIPLRRQESLR P
Sbjct: 304 GTFLLHKTKDLSDG--LSTSLSMRLSKHIEEDGFGQEGIPLRRQESLRLP 351

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356543405|ref|XP_003540151.1| PREDICTED: magnesium transporter NIPA2-like [Glycine max]

 Score =  580 bits (1495), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 291/340 (85%), Positives = 319/340 (93%), Gaps = 3/340 (0%)

Query: 9   WRDGMSSDNIKGLILALSSSIFIGSSFIVKKKGLKKAGASGVRAGFGGYSYLYEPLWWVG 68
           WR+GMSSDNIKGL LALSSS FIG+SFIVKKKGLKKAGASG+RAG GGYSYLYEPLWWVG
Sbjct: 13  WREGMSSDNIKGLCLALSSSFFIGASFIVKKKGLKKAGASGIRAGSGGYSYLYEPLWWVG 72

Query: 69  MITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVG 128
           MITM+VGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGC+LCVVG
Sbjct: 73  MITMIVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCVLCVVG 132

Query: 129 STTIVLHAPAEREIESVIEVWNLATEPAFLLYAALVITAVFILIFHYIPQYGQTHIMVYI 188
           STTIVLHAP EREIESV EVW+LA EPAFL YAALVITA FILIFH+IP YGQTHIMVYI
Sbjct: 133 STTIVLHAPQEREIESVSEVWDLAMEPAFLFYAALVITATFILIFHFIPLYGQTHIMVYI 192

Query: 189 GVCSLVGSLSVMSVKAIGIALKLTLSGMNQLIYPQTWAFTLIVIVCVLTQMNYLNMALDT 248
           GVCSLVGSL+VMSVKA+GI +KLTLSGMNQLIYPQTWAFTL+VIVCVLTQMNYLN ALDT
Sbjct: 193 GVCSLVGSLTVMSVKALGIVIKLTLSGMNQLIYPQTWAFTLVVIVCVLTQMNYLNKALDT 252

Query: 249 FNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKTKDL 308
           FNTAVVSPIYYVMFT+ TI+ASVIMFKDWDRQ+PTQ++TE+CGFVTIL+GTFLLHKTKD+
Sbjct: 253 FNTAVVSPIYYVMFTTFTIVASVIMFKDWDRQSPTQVITEICGFVTILSGTFLLHKTKDM 312

Query: 309 GDGSSLTPSMSLRLSKHADDDDLE-SEGIPLRRQESLRTP 347
            DG  L PS+S+RL KH+++D  +  EGIPLRRQE++R+P
Sbjct: 313 ADG--LQPSLSVRLPKHSEEDGFDGGEGIPLRRQEAMRSP 350

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255576223|ref|XP_002529005.1| Non-imprinted in Prader-Willi/Angelman syndrome region protein, putative [Ricinus communis] gi|223531545|gb|EEF33375.1| Non-imprinted in Prader-Willi/Angelman syndrome region protein, putative [Ricinus communis]

 Score =  580 bits (1495), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 296/343 (86%), Positives = 317/343 (92%), Gaps = 6/343 (1%)

Query: 7   HSWRD---GMSSDNIKGLILALSSSIFIGSSFIVKKKGLKKAGASGVRAGFGGYSYLYEP 63
            SWRD   GMSSDNIKGL+LALSSS FIG+SFIVKKKGLKKAGASG+RAG GGYSYLYEP
Sbjct: 4   QSWRDSYKGMSSDNIKGLVLALSSSFFIGASFIVKKKGLKKAGASGLRAGSGGYSYLYEP 63

Query: 64  LWWVGMITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCI 123
           LWWVGMITM+VGEIANFAAYAFAPAILVTPLGALSIIISA LAHIIL E+LHIFGILGC+
Sbjct: 64  LWWVGMITMIVGEIANFAAYAFAPAILVTPLGALSIIISAVLAHIILNEKLHIFGILGCV 123

Query: 124 LCVVGSTTIVLHAPAEREIESVIEVWNLATEPAFLLYAALVITAVFILIFHYIPQYGQTH 183
           LCVVGSTTIVLHAP EREIESV EVW+LATEPAFL YAALVITAVFILIFHYIP YGQTH
Sbjct: 124 LCVVGSTTIVLHAPQEREIESVKEVWDLATEPAFLFYAALVITAVFILIFHYIPDYGQTH 183

Query: 184 IMVYIGVCSLVGSLSVMSVKAIGIALKLTLSGMNQLIYPQTWAFTLIVIVCVLTQMNYLN 243
           IMVYIGVCSLVGSLSVMSVKA+GIALKLTLSGMNQLIYPQTWAF L+VI CV+TQMNYLN
Sbjct: 184 IMVYIGVCSLVGSLSVMSVKALGIALKLTLSGMNQLIYPQTWAFALVVITCVVTQMNYLN 243

Query: 244 MALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLH 303
            ALDTFNTAVVSPIYYVMFTSLTI+ASVIMFKDWDRQ+PTQIVTEMCGFVTIL+GTFLLH
Sbjct: 244 KALDTFNTAVVSPIYYVMFTSLTIVASVIMFKDWDRQSPTQIVTEMCGFVTILSGTFLLH 303

Query: 304 KTKDLGDGSSLTPSMSLRLSKHADDDDLESEGIPLRRQESLRT 346
           KTKD+ DG +   S+ +RL KH ++D   +EGIPLRRQESLR+
Sbjct: 304 KTKDMVDGPT---SLPVRLPKHTEEDSFGAEGIPLRRQESLRS 343

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255571788|ref|XP_002526837.1| Non-imprinted in Prader-Willi/Angelman syndrome region protein, putative [Ricinus communis] gi|223533841|gb|EEF35572.1| Non-imprinted in Prader-Willi/Angelman syndrome region protein, putative [Ricinus communis]

 Score =  578 bits (1491), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 280/340 (82%), Positives = 308/340 (90%), Gaps = 3/340 (0%)

Query: 6   GHSWRDGMSSDNIKGLILALSSSIFIGSSFIVKKKGLKKAGASGVRAGFGGYSYLYEPLW 65
           G S++ GMSSDNIKGL+LALSSS FIG+SFIVKKKGLKKA +SG+RAG GGYSYLYEPLW
Sbjct: 2   GDSYK-GMSSDNIKGLVLALSSSFFIGASFIVKKKGLKKAASSGLRAGAGGYSYLYEPLW 60

Query: 66  WVGMITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILC 125
           W+GMITM+VGEIANFAAYAFAPAILVTPLGALSIIIS+ LAH+ILRERLH+FGILGC LC
Sbjct: 61  WIGMITMIVGEIANFAAYAFAPAILVTPLGALSIIISSVLAHVILRERLHMFGILGCALC 120

Query: 126 VVGSTTIVLHAPAEREIESVIEVWNLATEPAFLLYAALVITAVFILIFHYIPQYGQTHIM 185
           VVGST IVLHAP EREIESV EVW LATEPAFLLYAA VI AVFI+I   IPQYGQ+H++
Sbjct: 121 VVGSTAIVLHAPQEREIESVKEVWELATEPAFLLYAAFVIGAVFIIIIRVIPQYGQSHVL 180

Query: 186 VYIGVCSLVGSLSVMSVKAIGIALKLTLSGMNQLIYPQTWAFTLIVIVCVLTQMNYLNMA 245
           VYI VCSLVGSLSVMSVKA+ IALKLT SGMNQL+YPQTW FTL+VI CV+TQMNYLN A
Sbjct: 181 VYIAVCSLVGSLSVMSVKALSIALKLTFSGMNQLVYPQTWVFTLVVITCVITQMNYLNKA 240

Query: 246 LDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKT 305
           LDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTIL+GTFLLHKT
Sbjct: 241 LDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILSGTFLLHKT 300

Query: 306 KDLGDGSSLTPSMSLRLSKHADDDDLESEGIPLRRQESLR 345
           KD+ +GSS  PS+ L + KH+++D  + EGIPLRRQ SLR
Sbjct: 301 KDMVEGSS--PSLPLSIPKHSEEDGFQPEGIPLRRQASLR 338

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449495529|ref|XP_004159868.1| PREDICTED: magnesium transporter NIPA2-like [Cucumis sativus]

 Score =  577 bits (1488), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 301/348 (86%), Positives = 317/348 (91%), Gaps = 3/348 (0%)

Query: 1   MADPNGHSWRDGMSSDNIKGLILALSSSIFIGSSFIVKKKGLKKAGASGVRAGFGGYSYL 60
           MA     SWR+GMSSDNIKGLILALSSS FIG+SFIVKKKGLKKAGASGVRAG GGYSYL
Sbjct: 1   MATSQTPSWREGMSSDNIKGLILALSSSFFIGASFIVKKKGLKKAGASGVRAGVGGYSYL 60

Query: 61  YEPLWWVGMITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGIL 120
           YEPLWWVGMITM+VGEIANFAAYAFAPAILVTPLGALSIIISA LAHIILRERLHIFGIL
Sbjct: 61  YEPLWWVGMITMIVGEIANFAAYAFAPAILVTPLGALSIIISAVLAHIILRERLHIFGIL 120

Query: 121 GCILCVVGSTTIVLHAPAEREIESVIEVWNLATEPAFLLYAALVITAVFILIFHYIPQYG 180
           GC+LCVVGSTTIVLHAP EREIESV EVW +A EPAFLLYAA V+TAVFILIFH+IPQYG
Sbjct: 121 GCVLCVVGSTTIVLHAPQEREIESVTEVWQMAMEPAFLLYAASVMTAVFILIFHFIPQYG 180

Query: 181 QTHIMVYIGVCSLVGSLSVMSVKAIGIALKLTLSGMNQLIYPQTWAFTLIVIVCVLTQMN 240
           QTHIMVYIGVCSLVGSLSVMSVKAIGIALKLTLSGMNQLIYPQTW FTL+VI CVLTQMN
Sbjct: 181 QTHIMVYIGVCSLVGSLSVMSVKAIGIALKLTLSGMNQLIYPQTWIFTLVVITCVLTQMN 240

Query: 241 YLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTF 300
           YLN ALDTFNTAVVSPIYYVMFTS TILASVIMFKDWDRQ+PTQ+VTEMCGFVTIL+GTF
Sbjct: 241 YLNKALDTFNTAVVSPIYYVMFTSFTILASVIMFKDWDRQSPTQVVTEMCGFVTILSGTF 300

Query: 301 LLHKTKDLGDGSSLTPSMSLRLSKHA-DDDDLESEGIPLRRQESLRTP 347
           LLHKTKD+ DG + T  +S+RLSKHA +      EGIPLRRQES R P
Sbjct: 301 LLHKTKDMVDGPATT--LSMRLSKHAEEGGFNGGEGIPLRRQESSRLP 346

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356560745|ref|XP_003548648.1| PREDICTED: magnesium transporter NIPA2-like [Glycine max]

 Score =  575 bits (1483), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 289/340 (85%), Positives = 317/340 (93%), Gaps = 3/340 (0%)

Query: 9   WRDGMSSDNIKGLILALSSSIFIGSSFIVKKKGLKKAGASGVRAGFGGYSYLYEPLWWVG 68
           WR+GMSSDNIKGL LALSSS FIG+SFIVKKKGLKKAGASG+RAG GGYSYLYEPLWWVG
Sbjct: 10  WREGMSSDNIKGLCLALSSSFFIGASFIVKKKGLKKAGASGIRAGSGGYSYLYEPLWWVG 69

Query: 69  MITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVG 128
           MITM+VGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGC+LCVVG
Sbjct: 70  MITMIVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCVLCVVG 129

Query: 129 STTIVLHAPAEREIESVIEVWNLATEPAFLLYAALVITAVFILIFHYIPQYGQTHIMVYI 188
           STTIVLHAP EREIESV EVW+LA EPAFL YAA+VITA FILIFH+IP YGQTHIMVYI
Sbjct: 130 STTIVLHAPQEREIESVSEVWDLAMEPAFLFYAAMVITATFILIFHFIPLYGQTHIMVYI 189

Query: 189 GVCSLVGSLSVMSVKAIGIALKLTLSGMNQLIYPQTWAFTLIVIVCVLTQMNYLNMALDT 248
           GVCSLVGSL+VMSVKA+GI +KLTLSGMNQLIYPQTWAFTL+V+VCVLTQMNYLN ALDT
Sbjct: 190 GVCSLVGSLTVMSVKALGIVIKLTLSGMNQLIYPQTWAFTLVVLVCVLTQMNYLNKALDT 249

Query: 249 FNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKTKDL 308
           FNTAVVSPIYYVMFT+ TI+ASVIMFKDWDRQ+PTQ++TE+CGFVTIL+GTFLLHKTKD+
Sbjct: 250 FNTAVVSPIYYVMFTTFTIVASVIMFKDWDRQSPTQVITEICGFVTILSGTFLLHKTKDM 309

Query: 309 GDGSSLTPSMSLRLSKHADDDDLE-SEGIPLRRQESLRTP 347
            DG  L  S+S+RL KH+++D  +  EGIPLRRQES+R P
Sbjct: 310 ADG--LQTSLSIRLPKHSEEDGFDGGEGIPLRRQESMRLP 347

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388492250|gb|AFK34191.1| unknown [Lotus japonicus]

 Score =  574 bits (1480), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 287/344 (83%), Positives = 316/344 (91%), Gaps = 1/344 (0%)

Query: 5   NGHSWRDGMSSDNIKGLILALSSSIFIGSSFIVKKKGLKKAGASGVRAGFGGYSYLYEPL 64
           N  SWR+GMSSDNIKGL+LALSSS FIG+SFIVKKKGLKKAGASG+RAG GGYSYLYEPL
Sbjct: 6   NPSSWREGMSSDNIKGLVLALSSSFFIGASFIVKKKGLKKAGASGIRAGSGGYSYLYEPL 65

Query: 65  WWVGMITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCIL 124
           WWVGMITM+VGEIANFAAYAFAPA+LVTPLGALSIIISAALAHIILRERLHIFG+LGC L
Sbjct: 66  WWVGMITMIVGEIANFAAYAFAPALLVTPLGALSIIISAALAHIILRERLHIFGVLGCAL 125

Query: 125 CVVGSTTIVLHAPAEREIESVIEVWNLATEPAFLLYAALVITAVFILIFHYIPQYGQTHI 184
           CVVGSTTIVLHAP EREI SV EVW+LA EPAFL YAALVITA F+LIFH+IP YGQTHI
Sbjct: 126 CVVGSTTIVLHAPQEREIGSVTEVWDLAMEPAFLFYAALVITAAFVLIFHFIPLYGQTHI 185

Query: 185 MVYIGVCSLVGSLSVMSVKAIGIALKLTLSGMNQLIYPQTWAFTLIVIVCVLTQMNYLNM 244
           MVYIGVCSLVGSLSVMSVKA+GIA+KLTLSGMNQLIYPQTW FTL+V VCVLTQMNYLN 
Sbjct: 186 MVYIGVCSLVGSLSVMSVKALGIAIKLTLSGMNQLIYPQTWVFTLVVTVCVLTQMNYLNK 245

Query: 245 ALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHK 304
           ALDTFNTAVVSPIYYVMFT+LTI+ASVIMFKDWDRQ+PTQ++TE+CGFV IL+GTFLLH+
Sbjct: 246 ALDTFNTAVVSPIYYVMFTTLTIVASVIMFKDWDRQSPTQVITEICGFVAILSGTFLLHR 305

Query: 305 TKDLGDGSSLTPSMSLRLSKHADDDDLE-SEGIPLRRQESLRTP 347
           TKD+ DG  L  S S+RL KH+++D  +  EGIPLRRQE+ R+P
Sbjct: 306 TKDMTDGHGLQSSSSIRLPKHSEEDGFDGGEGIPLRRQETSRSP 349

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357445353|ref|XP_003592954.1| Magnesium transporter NIPA2 [Medicago truncatula] gi|355482002|gb|AES63205.1| Magnesium transporter NIPA2 [Medicago truncatula]

 Score =  570 bits (1468), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 289/347 (83%), Positives = 319/347 (91%), Gaps = 7/347 (2%)

Query: 1   MADPNGHSWRDGMSSDNIKGLILALSSSIFIGSSFIVKKKGLKKAGASGVRAGFGGYSYL 60
           MA  +  SWR+GMSSDNIKGL+LALSSS FIG+SFIVKKKGLKKAGASG+RAG GGYSYL
Sbjct: 1   MASSSSSSWREGMSSDNIKGLVLALSSSFFIGASFIVKKKGLKKAGASGIRAGSGGYSYL 60

Query: 61  YEPLWWVGMITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGIL 120
           YEPLWWVGMITM+VGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFG+L
Sbjct: 61  YEPLWWVGMITMIVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGVL 120

Query: 121 GCILCVVGSTTIVLHAPAEREIESVIEVWNLATEPAFLLYAALVITAVFILIFHYIPQYG 180
           GC LCVVGSTTIVLHAP EREIESV EVW+LA +PAFL YAALVITA FIL+FH+IP YG
Sbjct: 121 GCALCVVGSTTIVLHAPQEREIESVPEVWDLAMDPAFLFYAALVITATFILVFHFIPLYG 180

Query: 181 QTHIMVYIGVCSLVGSLSVMSVKAIGIALKLTLSGMNQLIYPQTWAFTLIVIVCVLTQMN 240
           QTHIMVYIGVCSLVGSLSVMSVKA+GIA+KLTLSGMNQLIYPQTW F L+V VCVLTQMN
Sbjct: 181 QTHIMVYIGVCSLVGSLSVMSVKALGIAIKLTLSGMNQLIYPQTWVFALVVTVCVLTQMN 240

Query: 241 YLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTF 300
           YLN ALDTFNTAVVSPIYYVMFT+LTI+ASVIMFKDWDRQ+PTQ++TE+CGFVTIL+GTF
Sbjct: 241 YLNKALDTFNTAVVSPIYYVMFTTLTIVASVIMFKDWDRQSPTQVITEICGFVTILSGTF 300

Query: 301 LLHKTKDLGDGSSLTPSMSLRLSKHADDDDLES-EGIPLRRQESLRT 346
           LLHKTKD+ DGS      S+RL+KH+++D  +  EGIPLRRQES+R+
Sbjct: 301 LLHKTKDMADGS------SIRLNKHSEEDGFDDVEGIPLRRQESMRS 341

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	347
TAIR|locus:2016084	343	AT1G71900 "AT1G71900" [Arabido	0.979	0.991	0.654	4.9e-117
TAIR|locus:2009343	368	AT1G34470 "AT1G34470" [Arabido	0.997	0.940	0.651	2.7e-116
TAIR|locus:2136912	386	AT4G09640 "AT4G09640" [Arabido	0.979	0.880	0.609	7.1e-111
TAIR|locus:2119540	336	AT4G13800 [Arabidopsis thalian	0.884	0.913	0.563	2.1e-91
TAIR|locus:2076186	335	AT3G23870 "AT3G23870" [Arabido	0.893	0.925	0.551	7.3e-91
TAIR|locus:2047112	328	AT2G21120 [Arabidopsis thalian	0.746	0.789	0.536	7.6e-80
TAIR|locus:2141742	326	AT4G38730 "AT4G38730" [Arabido	0.749	0.797	0.534	5.5e-77
UNIPROTKB|Q3SWX0	360	NIPA2 "Magnesium transporter N	0.812	0.783	0.420	1.9e-58
CGD|CAL0004327	368	orf19.5352 [Candida albicans (	0.737	0.695	0.417	8.4e-58
UNIPROTKB|Q8N8Q9	360	NIPA2 "Magnesium transporter N	0.815	0.786	0.408	8.4e-58

TAIR|locus:2016084 AT1G71900 "AT1G71900" [Arabidopsis thaliana (taxid:3702)]

 Score = 1153 (410.9 bits), Expect = 4.9e-117, P = 4.9e-117
 Identities = 229/350 (65%), Positives = 260/350 (74%)

Query:     1 MADPNGHSWRD---GMSSDNIKXXXXXXXXXXXXXXXXXVXXXXXXXXXXSGVRAGFGGY 57
             MA+ +G SWRD   GMSSDNIK                 V          +G RAG GGY
Sbjct:     1 MAESSG-SWRDSYKGMSSDNIKGLVLALSSSLFIGASFIVKKKGLKKAASTGTRAGVGGY 59

Query:    58 SYLYEPLWWVGMITMVVGEIXXXXXXXXXXXILVTPXXXXXXXXXXXXXXXXXRERLHIF 117
             SYLYEPLWW+GM TM++GEI           ILVTP                 RE+LHIF
Sbjct:    60 SYLYEPLWWIGMTTMLLGEIANFAAYAFAPAILVTPLGAVSIIISAVLAHIILREKLHIF 119

Query:   118 GILGCILCVVGSTTIVLHAPAEREIESVIEVWNLATEPAFLLYAALVITAVFILIFHYIP 177
             GILGC LCVVGSTTIVLHAP EREI+SVIEVWNLATEPAF+ YA+LVI A   LI  ++P
Sbjct:   120 GILGCALCVVGSTTIVLHAPQEREIDSVIEVWNLATEPAFMFYASLVIGAAVFLIIRFVP 179

Query:   178 QYGQTHIMVYIGVCSLVGSLSVMSVKAIGIALKLTLSGMNQLIYPQTWAFTLIVIVCVLT 237
             QYGQT++MVYIG+CSLVGSLSVMSVKA+GIALKLT SG NQL YPQTW FTL+V+ CV+T
Sbjct:   180 QYGQTNVMVYIGICSLVGSLSVMSVKALGIALKLTFSGTNQLFYPQTWIFTLVVLTCVVT 239

Query:   238 QMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILA 297
             Q+NYLN ALDTFNTA+VSPIYYVMFTSLTILASVIMFKDWDRQN TQIVTE+CGFVTIL+
Sbjct:   240 QLNYLNKALDTFNTAIVSPIYYVMFTSLTILASVIMFKDWDRQNGTQIVTEICGFVTILS 299

Query:   298 GTFLLHKTKDLGDGSSLTPSMSLRLSKHADDDDLESEGIPLRRQESLRTP 347
             GTFLLH+TKD+ +GSS+   + LR+SKH +    E EGIPLRRQESLR+P
Sbjct:   300 GTFLLHRTKDMVEGSSVI--LPLRISKHIN----EEEGIPLRRQESLRSP 343

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2009343 AT1G34470 "AT1G34470" [Arabidopsis thaliana (taxid:3702)]

 Score = 1146 (408.5 bits), Expect = 2.7e-116, P = 2.7e-116
 Identities = 230/353 (65%), Positives = 259/353 (73%)

Query:     1 MADPNGHSWRD---GMSSDNIKXXXXXXXXXXXXXXXXXVXXXXXXXXXXSGVRAGFGGY 57
             MA  +G SWRD   GMSSDNIK                 V          SG+RAG GGY
Sbjct:     1 MASLSG-SWRDAYKGMSSDNIKGLVLALSSSLFIGASFIVKKKGLKRAGASGLRAGSGGY 59

Query:    58 SYLYEPLWWVGMITMVVGEIXXXXXXXXXXXILVTPXXXXXXXXXXXXXXXXXRERLHIF 117
             SYL EPLWWVGMITM+VGEI           ILVTP                  E+LH F
Sbjct:    60 SYLLEPLWWVGMITMIVGEIANFAAYAFAPAILVTPLGALSIIISAALAHVILHEKLHTF 119

Query:   118 GILGCILCVVGSTTIVLHAPAEREIESVIEVWNLATEPAFLLYAALVITAVFILIFHYIP 177
             G+LGC+LCVVGS TIVLHAP E+EI+SV++VWNLATEPAFLLYAA V+ A  ILI  ++P
Sbjct:   120 GLLGCVLCVVGSITIVLHAPQEQEIDSVLQVWNLATEPAFLLYAAAVVGAAIILIVQFVP 179

Query:   178 QYGQTHIMVYIGVCSLVGSLSVMSVKAIGIALKLTLSGMNQLIYPQTWAFTLIVIVCVLT 237
             QYGQ+H+MVYIGVCSLVGSLSVMSVKA+GIALKLT SGMNQLIYPQTW FTLIV+ CV+T
Sbjct:   180 QYGQSHVMVYIGVCSLVGSLSVMSVKALGIALKLTFSGMNQLIYPQTWVFTLIVLTCVIT 239

Query:   238 QMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILA 297
             QMNYLN ALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQ+ TQIVTE+CGFVTIL+
Sbjct:   240 QMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQDGTQIVTELCGFVTILS 299

Query:   298 GTFLLHKTKDLGDGSSLTPSMSLRLSKHADDDD-LESEGIPL--RRQESLRTP 347
             GTFLLHKTKD+ DGSS   +++LRL K  +D +  E EGIPL  RR E  ++P
Sbjct:   300 GTFLLHKTKDMVDGSSSLGNLALRLPKQLEDSNGFEQEGIPLTLRRHECTKSP 352

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2136912 AT4G09640 "AT4G09640" [Arabidopsis thaliana (taxid:3702)]

 Score = 1063 (379.3 bits), Expect = 7.1e-111, Sum P(2) = 7.1e-111
 Identities = 215/353 (60%), Positives = 249/353 (70%)

Query:     8 SWRD---GMSSDNIKXXXXXXXXXXXXXXXXXVXXXXXXXXXXSGVRAGFGGYSYLYEPL 64
             SWRD   GMSSDN+K                 V          SG+RAG GGYSYL EPL
Sbjct:     7 SWRDAYKGMSSDNVKGLVLALSSSIFIGASFIVKKKGLKKAGASGLRAGSGGYSYLLEPL 66

Query:    65 WWVGMITMVVGEIXXXXXXXXXXXILVTPXXXXXXXXXXXXXXXXXRERLHIFGILGCIL 124
             WW+GMITM+VGEI           ILVTP                 +E+LH FGILGC L
Sbjct:    67 WWIGMITMIVGEIANFAAYAFAPAILVTPLGALSIIISASLAHIILQEKLHTFGILGCAL 126

Query:   125 CVVGSTTIVLHAPAEREIESVIEVWNLATEPAFLLYAALVITAVFILIFHYIPQYGQTHI 184
             C+VGS TIVLHAP E++I SV+EVWNLATEPAFL YAA V+ A  +LI  +IP YGQ+H+
Sbjct:   127 CIVGSVTIVLHAPQEQDIVSVLEVWNLATEPAFLFYAAAVVGAAIVLIVQFIPLYGQSHV 186

Query:   185 MVYIGVCSLVGSLSVMSVKAIGIALKLTLSGMNQLIYPQTWAFTLIVIVCVLTQMNYLNM 244
             MVYIGVCSL+GSLSVMSVKA+GIALKLT SG NQL YPQTW FT+IV+ CV+TQMNYLN 
Sbjct:   187 MVYIGVCSLIGSLSVMSVKALGIALKLTFSGTNQLGYPQTWVFTVIVLFCVITQMNYLNK 246

Query:   245 ALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHK 304
             ALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQ+ TQI+TE+CGFVTIL+GTFLLH 
Sbjct:   247 ALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQSGTQIMTELCGFVTILSGTFLLHT 306

Query:   305 TKDLGDGSS---LTPS----MSLRLSKHADDDD-LESEGI--PLRRQESLRTP 347
             T D+ DG S   L+      + LR+ KH++D +    +GI   LRRQES ++P
Sbjct:   307 TTDMVDGESKGNLSSEEDSHLLLRIPKHSEDSNGFVQDGIILSLRRQESAKSP 359

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2119540 AT4G13800 [Arabidopsis thaliana (taxid:3702)]

 Score = 911 (325.7 bits), Expect = 2.1e-91, P = 2.1e-91
 Identities = 173/307 (56%), Positives = 210/307 (68%)

Query:    13 MSSDNIKXXXXXXXXXXXXXXXXXVXXXXXXXXXXSGVRAGFGGYSYLYEPLWWVGMITM 72
             MS DNI                  +          SG RAG GGY YLYEP WW GMITM
Sbjct:     4 MSPDNIHGVILAVSSSIFIGSSFIIKKKGLKKAGVSGARAGEGGYGYLYEPWWWAGMITM 63

Query:    73 VVGEIXXXXXXXXXXXILVTPXXXXXXXXXXXXXXXXXRERLHIFGILGCILCVVGSTTI 132
             +VGEI           ILVTP                  E+LH+FGILGC+LCVVGSTTI
Sbjct:    64 IVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILEEKLHMFGILGCVLCVVGSTTI 123

Query:   133 VLHAPAEREIESVIEVWNLATEPAFLLYAALVITAVFILIFHYIPQYGQTHIMVYIGVCS 192
             VLHAP E+ IESV +VW+LATEP FL Y+A+V+  V  LIF+Y P+YG+TH++VY+G+CS
Sbjct:   124 VLHAPHEQGIESVKQVWHLATEPGFLAYSAVVLVVVLALIFYYEPRYGKTHMIVYVGICS 183

Query:   193 LVGSLSVMSVKAIGIALKLTLSGMNQLIYPQTWAFTLIVIVCVLTQMNYLNMALDTFNTA 252
             L+GSL+VMSVKA+ IA+KLT SGMNQ  Y   W F ++V +C + Q+NYLN ALD FNTA
Sbjct:   184 LMGSLTVMSVKAVAIAIKLTFSGMNQFKYFHAWIFIIVVTICCILQINYLNKALDNFNTA 243

Query:   253 VVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKTKDLGDGS 312
             V+SP+YYVMFT+ TILAS+IMFKDW  Q+  QI TE+CGFVTIL+GTFLLHKTKD+G+ +
Sbjct:   244 VISPVYYVMFTTFTILASMIMFKDWASQSGLQIATELCGFVTILSGTFLLHKTKDMGNST 303

Query:   313 SLTPSMS 319
             SL  S S
Sbjct:   304 SLRGSTS 310

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2076186 AT3G23870 "AT3G23870" [Arabidopsis thaliana (taxid:3702)]

 Score = 906 (324.0 bits), Expect = 7.3e-91, P = 7.3e-91
 Identities = 171/310 (55%), Positives = 214/310 (69%)

Query:    11 DGMSSDNIKXXXXXXXXXXXXXXXXXVXXXXXXXXXXSGVRAGFGGYSYLYEPLWWVGMI 70
             D MS DNI                  +          SGVRAG GGY YL EP WW GMI
Sbjct:     2 DQMSPDNINGVILAVSSSIFIGSSFIIKKKGLKKAGASGVRAGEGGYGYLKEPWWWAGMI 61

Query:    71 TMVVGEIXXXXXXXXXXXILVTPXXXXXXXXXXXXXXXXXRERLHIFGILGCILCVVGST 130
             TM+VGE+           ILVTP                 +E+LH+FGILGCILCVVGST
Sbjct:    62 TMIVGEVANFAAYAFAPAILVTPLGALSIIFSAVLAHFILKEKLHMFGILGCILCVVGST 121

Query:   131 TIVLHAPAEREIESVIEVWNLATEPAFLLYAALVITAVFILIFHYIPQYGQTHIMVYIGV 190
             TIVLHAP E++IESV ++W LA EP FL+Y+A+++  V ILIF+Y P+YG+TH++VY+G+
Sbjct:   122 TIVLHAPHEQKIESVKQIWQLAIEPGFLVYSAVIVIVVAILIFYYEPRYGKTHMIVYVGI 181

Query:   191 CSLVGSLSVMSVKAIGIALKLTLSGMNQLIYPQTWAFTLIVIVCVLTQMNYLNMALDTFN 250
             CSL+GSL+VMSVKA+ IA+KLT SG NQ  Y  TW F L+V  C + Q+NYLN ALDTFN
Sbjct:   182 CSLMGSLTVMSVKAVAIAIKLTFSGTNQFKYFNTWIFILVVATCCILQINYLNKALDTFN 241

Query:   251 TAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKTKDLGD 310
             TAV+SP+YYVMFT+ TI+AS+IMFKDW  Q+  +I TE+CGFVTIL+GTFLLHKTKD+G+
Sbjct:   242 TAVISPVYYVMFTTFTIIASMIMFKDWASQSGLKIATELCGFVTILSGTFLLHKTKDMGN 301

Query:   311 GSSLTPSMSL 320
              +S   S+S+
Sbjct:   302 SASGRGSISM 311

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016036 "cellular response to phosphate starvation" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2047112 AT2G21120 [Arabidopsis thaliana (taxid:3702)]

 Score = 802 (287.4 bits), Expect = 7.6e-80, P = 7.6e-80
 Identities = 139/259 (53%), Positives = 188/259 (72%)

Query:    49 GVRAGFGGYSYLYEPLWWVGMITMVVGEIXXXXXXXXXXXILVTPXXXXXXXXXXXXXXX 108
             G RAG+GGY+YL EPLWW GM+TM+VGE            +LVTP               
Sbjct:    37 GTRAGYGGYTYLLEPLWWAGMVTMIVGEAANFVAYIYAPAVLVTPLGALSIIISAVLAHF 96

Query:   109 XXRERLHIFGILGCILCVVGSTTIVLHAPAEREIESVIEVWNLATEPAFLLYAALVITAV 168
               +E+L   G+LGC+ C+VGS  IV+HAP E+   SV E+WNLAT+PAFL+Y A+ ++ V
Sbjct:    97 LLKEKLKKMGVLGCVSCIVGSVVIVIHAPKEQTPNSVEEIWNLATQPAFLIYVAITMSIV 156

Query:   169 FILIFHYIPQYGQTHIMVYIGVCSLVGSLSVMSVKAIGIALKLTLSGMNQLIYPQTWAFT 228
               LI H+ P  GQT+I+VYIG+CSL+G+L+VMS+KAIGIA+KLT+ G++Q+ YPQTW F 
Sbjct:   157 LALILHFEPLCGQTNILVYIGICSLMGALTVMSIKAIGIAIKLTMEGVSQIGYPQTWLFV 216

Query:   229 LIVIVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTE 288
             ++ + CV+TQ+ YLN ALDTFN A+VSP+YYVMFT+LTI+AS IMFKDW  Q+   + +E
Sbjct:   217 MVAVTCVVTQLIYLNKALDTFNAAIVSPVYYVMFTTLTIVASAIMFKDWSGQDAASVASE 276

Query:   289 MCGFVTILAGTFLLHKTKD 307
             +CGF+T+L GT +LH T++
Sbjct:   277 LCGFITVLTGTMILHGTRE 295

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009625 "response to insect" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

TAIR|locus:2141742 AT4G38730 "AT4G38730" [Arabidopsis thaliana (taxid:3702)]

 Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
 Identities = 139/260 (53%), Positives = 183/260 (70%)

Query:    48 SGVRAGFGGYSYLYEPLWWVGMITMVVGEIXXXXXXXXXXXILVTPXXXXXXXXXXXXXX 107
             +G RAGFGGY+YL EPLWWVG++TM  GEI           +LVTP              
Sbjct:    36 NGTRAGFGGYTYLLEPLWWVGLVTMTFGEIANFVAYVYAPAVLVTPLGALSIIISAVLAH 95

Query:   108 XXXRERLHIFGILGCILCVVGSTTIVLHAPAEREIESVIEVWNLATEPAFLLYAALVITA 167
                 E+L   G+ GC+ C+VGS  IV+HAP E+   SV E+W LA +PAFL+Y A+ ++ 
Sbjct:    96 FLLDEKLRKMGVWGCVCCIVGSVMIVIHAPQEQTPNSVEEIWKLAMQPAFLIYVAISMSI 155

Query:   168 VFILIFHYIPQYGQTHIMVYIGVCSLVGSLSVMSVKAIGIALKLTLSGMNQLIYPQTWAF 227
             V  LI +  P  GQT+I+VYIG+CSL+GSL+VMS+KA+GIA+KLT  G+NQ+ YP+TW F
Sbjct:   156 VLALILYCEPLCGQTNILVYIGICSLMGSLTVMSIKAVGIAIKLTFEGINQIWYPETWFF 215

Query:   228 TLIVIVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVT 287
              ++  +CV+ QM YLN ALDTFN A+VSPIYYVMFT+LTI+AS IMFKDW+ QN   I +
Sbjct:   216 AMVAAICVVMQMIYLNKALDTFNAAIVSPIYYVMFTTLTIVASAIMFKDWNGQNTDSIAS 275

Query:   288 EMCGFVTILAGTFLLHKTKD 307
             E+CGF+T+L GT +LH T++
Sbjct:   276 EICGFITVLTGTVILHSTRE 295

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

UNIPROTKB|Q3SWX0 NIPA2 "Magnesium transporter NIPA2" [Bos taurus (taxid:9913)]

 Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
 Identities = 119/283 (42%), Positives = 171/283 (60%)

Query:    51 RAGFGGYSYLYEPLWWVGMITMVVGEIXXXXXXXXXXXILVTPXXXXXXXXXXXXXXXXX 110
             RAG GG++YL E LWW G+++M  GE+            LVTP                 
Sbjct:    45 RAGQGGHAYLKEWLWWAGLLSMGAGEVANFAAYAFAPATLVTPLGALSVLVSAILSSYFL 104

Query:   111 RERLHIFGILGCILCVVGSTTIVLHAPAEREIESVIEVWNLATEPAFLLYAALVITAVFI 170
              ERL++ G +GC+L ++GST +V+HAP E EIE++ E+ +   +P F+++A LV+    I
Sbjct:   105 NERLNLHGKIGCLLSILGSTVMVIHAPKEEEIETLNEMSHKLGDPGFVVFATLVVIVSLI 164

Query:   171 LIFHYIPQYGQTHIMVYIGVCSLVGSLSVMSVKAIGIALKLTLSGMNQLIYPQTWAFTLI 230
             LIF   P++GQT+I+VYI +CS++G++SV   K +GIA+K   +G   L +P TW   L 
Sbjct:   165 LIFVVGPRHGQTNILVYITICSVIGAVSVSCAKGLGIAIKELFAGKPVLQHPLTWILLLS 224

Query:   231 VIVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMC 290
             +IVCV TQ+NYLN ALD FNT++V+PIYYV FT+  I  S I+FK+W       ++  + 
Sbjct:   225 LIVCVSTQINYLNRALDIFNTSIVTPIYYVFFTTSVITCSAILFKEWQDMPVDDVIGTLS 284

Query:   291 GFVTILAGTFLLHKTKDLGDGSSLTPSMSLRLSKHADDDDLES 333
             GF TI+ G FLLH  KD+    S  P +S R  + A +  L S
Sbjct:   285 GFFTIIVGIFLLHAFKDVSFSLSSLP-VSFRKDEKAVNGSLSS 326

GO:0005886 "plasma membrane" evidence=IEA

GO:0005769 "early endosome" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IEA

CGD|CAL0004327 orf19.5352 [Candida albicans (taxid:5476)]

 Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
 Identities = 107/256 (41%), Positives = 160/256 (62%)

Query:    48 SGVRAGFGGYSYLYEPLWWVGMITMVVGEIXXXXXXXXXXXILVTPXXXXXXXXXXXXXX 107
             +G   G     YL  P+WW GMITM +GEI           ILVTP              
Sbjct:    36 TGGTDGVQASDYLQNPIWWGGMITMAIGEIANFAAYTFAPAILVTPLGALSVIIGAVLAA 95

Query:   108 XXXRERLHIFGILGCILCVVGSTTIVLHAPAEREIESVIEVWNLATEPAFLLYAALVITA 167
                +ERL   G +GC +C++GS  I+LHAP ++E+++V E+   AT+P F+ Y  +V   
Sbjct:    96 IFLKERLGTLGKMGCAICLMGSVIIILHAPPDKEVQTVDEILGYATQPGFMFYCTVVTLY 155

Query:   168 VFILIFHYIPQYGQTHIMVYIGVCSLVGSLSVMSVKAIGIALKLTLSGMNQLIYPQTWAF 227
                +I+  +P+YG T+ M+Y+ +CS VGS+SVMS+KA GIALKLTL G NQ  +  T+ F
Sbjct:   156 SLFMIYKIVPKYGNTNPMIYLSICSSVGSISVMSIKAFGIALKLTLGGNNQFTHVSTYLF 215

Query:   228 TLIVIVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVT 287
              ++V +C++TQMNY N ALD F+T++V+P+YYV FT+ T+ AS I+FK ++  +   I++
Sbjct:   216 LIVVALCIVTQMNYFNKALDQFDTSIVNPLYYVTFTTFTLAASFILFKGFNTSSAVDIIS 275

Query:   288 EMCGFVTILAGTFLLH 303
              + GF+ I +G +LL+
Sbjct:   276 LLIGFLIIFSGVYLLN 291

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q8N8Q9 NIPA2 "Magnesium transporter NIPA2" [Homo sapiens (taxid:9606)]

 Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
 Identities = 116/284 (40%), Positives = 172/284 (60%)

Query:    50 VRAGFGGYSYLYEPLWWVGMITMVVGEIXXXXXXXXXXXILVTPXXXXXXXXXXXXXXXX 109
             +RAG GG++YL E LWW G+++M  GE+            LVTP                
Sbjct:    44 MRAGQGGHAYLKEWLWWAGLLSMGAGEVANFAAYAFAPATLVTPLGALSVLVSAILSSYF 103

Query:   110 XRERLHIFGILGCILCVVGSTTIVLHAPAEREIESVIEVWNLATEPAFLLYAALVITAVF 169
               ERL++ G +GC+L ++GST +V+HAP E EIE++ E+ +   +P F+++A LV+    
Sbjct:   104 LNERLNLHGKIGCLLSILGSTVMVIHAPKEEEIETLNEMSHKLGDPGFVVFATLVVIVAL 163

Query:   170 ILIFHYIPQYGQTHIMVYIGVCSLVGSLSVMSVKAIGIALKLTLSGMNQLIYPQTWAFTL 229
             ILIF   P++GQT+I+VYI +CS++G+ SV  VK +GIA+K   +G   L +P  W   L
Sbjct:   164 ILIFVVGPRHGQTNILVYITICSVIGAFSVSCVKGLGIAIKELFAGKPVLRHPLAWILLL 223

Query:   230 IVIVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEM 289
              +IVCV TQ+NYLN ALD FNT++V+PIYYV FT+  +  S I+FK+W       ++  +
Sbjct:   224 SLIVCVSTQINYLNRALDIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTL 283

Query:   290 CGFVTILAGTFLLHKTKDLGDGSSLTPSMSLRLSKHADDDDLES 333
              GF TI+ G FLLH  KD+    +  P +S R  + A + +L +
Sbjct:   284 SGFFTIIVGIFLLHAFKDVSFSLASLP-VSFRKDEKAMNGNLSN 326

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005769 "early endosome" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q3SWX0	NIPA2_BOVIN	No assigned EC number	0.4953	0.9308	0.8972	yes	no
Q5R7Q3	NIPA2_PONAB	No assigned EC number	0.4861	0.9308	0.8972	yes	no
Q8N8Q9	NIPA2_HUMAN	No assigned EC number	0.4861	0.9308	0.8972	yes	no
Q9JJC8	NIPA2_MOUSE	No assigned EC number	0.4769	0.9308	0.8997	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00035418001 SubName- Full=Chromosome chr12 scaffold_78, whole genome shotgun sequence; (337 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	347
pfam05653	300	pfam05653, Mg_trans_NIPA, Magnesium transporter NI	1e-160

>gnl|CDD|114381 pfam05653, Mg_trans_NIPA, Magnesium transporter NIPA

 Score =  449 bits (1156), Expect = e-160
 Identities = 193/299 (64%), Positives = 239/299 (79%)

Query: 13  MSSDNIKGLILALSSSIFIGSSFIVKKKGLKKAGASGVRAGFGGYSYLYEPLWWVGMITM 72
           M++DN  GLILA+SSSIFIGSSFI+KKKGL +    G+RAG GGY YL E LWW G++TM
Sbjct: 1   MNTDNYIGLILAVSSSIFIGSSFIIKKKGLLRLARGGMRAGEGGYGYLKEWLWWAGLLTM 60

Query: 73  VVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTI 132
           +VGE ANFAAYAFAPA LVTPLGALS+IISA L+   L E+L++FG LGC+LC+VGST I
Sbjct: 61  IVGEAANFAAYAFAPATLVTPLGALSVIISAVLSSFFLNEKLNLFGKLGCVLCIVGSTVI 120

Query: 133 VLHAPAEREIESVIEVWNLATEPAFLLYAALVITAVFILIFHYIPQYGQTHIMVYIGVCS 192
           V+HAP E+EIESV EVWNLAT+P FL+Y  LV+  V ILIF   P++GQT+I+VYI +CS
Sbjct: 121 VIHAPKEQEIESVREVWNLATDPGFLVYVILVVGVVLILIFFVEPRHGQTNILVYITICS 180

Query: 193 LVGSLSVMSVKAIGIALKLTLSGMNQLIYPQTWAFTLIVIVCVLTQMNYLNMALDTFNTA 252
           L+GSL+VMSVKA+GIA+KLT SG NQL YPQ W F ++V+ CV+TQ+NYLN ALD FNT+
Sbjct: 181 LIGSLTVMSVKALGIAIKLTFSGKNQLGYPQFWIFLVVVVTCVVTQINYLNKALDIFNTS 240

Query: 253 VVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKTKDLGDG 311
           +V+P+YYV FT+  I AS I+FK+W  Q+   I  E+CGF TIL GTFLLH T+D+   
Sbjct: 241 IVTPVYYVFFTTSVIAASAILFKEWLGQSFDDIAGELCGFFTILLGTFLLHATRDIEFS 299

NIPA (nonimprinted in Prader-Willi/Angelman syndrome) is a family of integral membrane proteins which function as magnesium transporters. Length = 300

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	347
KOG2922	335	consensus Uncharacterized conserved protein [Funct	100.0
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	100.0
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.34
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	99.18
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.03
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.03
PRK15430	296	putative chloramphenical resistance permease RarD;	99.0
PLN00411	358	nodulin MtN21 family protein; Provisional	98.95
PRK11689	295	aromatic amino acid exporter; Provisional	98.95
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.94
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.91
PRK11272	292	putative DMT superfamily transporter inner membran	98.89
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.86
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	98.73
COG2510	140	Predicted membrane protein [Function unknown]	98.73
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.72
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.69
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.66
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	98.47
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.44
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.42
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.35
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	98.21
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.16
PRK09541	110	emrE multidrug efflux protein; Reviewed	98.1
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.03
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	98.01
KOG4510	346	consensus Permease of the drug/metabolite transpor	97.97
PRK13499	345	rhamnose-proton symporter; Provisional	97.95
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.85
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.81
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	97.78
PLN00411	358	nodulin MtN21 family protein; Provisional	97.73
PRK11689	295	aromatic amino acid exporter; Provisional	97.6
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	97.6
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	97.59
PRK11272	292	putative DMT superfamily transporter inner membran	97.57
PRK11431	105	multidrug efflux system protein; Provisional	97.56
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.45
COG2510	140	Predicted membrane protein [Function unknown]	97.42
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	97.4
COG2076	106	EmrE Membrane transporters of cations and cationic	97.4
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	97.24
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.1
COG0697	292	RhaT Permeases of the drug/metabolite transporter	96.94
KOG2765	416	consensus Predicted membrane protein [Function unk	96.93
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	96.91
COG2962	293	RarD Predicted permeases [General function predict	96.86
PRK11431	105	multidrug efflux system protein; Provisional	96.75
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	96.56
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.48
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	96.37
KOG3912	372	consensus Predicted integral membrane protein [Gen	96.14
PRK15430	296	putative chloramphenical resistance permease RarD;	96.11
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	96.06
PF13536	113	EmrE: Multidrug resistance efflux transporter	95.88
COG2076	106	EmrE Membrane transporters of cations and cationic	95.77
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	95.75
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	95.33
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	95.24
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	94.95
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	94.86
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	94.83
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	94.08
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	93.99
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	93.96
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	93.78
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	93.36
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	92.6
COG1742	109	Uncharacterized conserved protein [Function unknow	91.67
PRK02237	109	hypothetical protein; Provisional	91.42
KOG4831	125	consensus Unnamed protein [Function unknown]	91.35
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	91.23
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	90.96
KOG1580	337	consensus UDP-galactose transporter related protei	90.55
KOG2765	416	consensus Predicted membrane protein [Function unk	88.66
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	88.34
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	84.75
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	82.79
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	81.24

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=2.8e-63  Score=469.25  Aligned_cols=325  Identities=68%  Similarity=1.115  Sum_probs=305.9

Q ss_pred             CCCCCCcccc--CCchhhHHHHHHHHHHHHHHHHHHHHhHhhhhhhccCCcccCCcccccccchhHHHHHHHHHHHHHHH
Q 019052            2 ADPNGHSWRD--GMSSDNIKGLILALSSSIFIGSSFIVKKKGLKKAGASGVRAGFGGYSYLYEPLWWVGMITMVVGEIAN   79 (347)
Q Consensus         2 ~~~~~~~~~~--~~~s~~~iGv~lal~sa~~~a~G~~lqk~~~~~~~~~~~~~~~~~~~~l~~p~W~~G~~l~~~g~~~~   79 (347)
                      +.-||+.|++  .|.+++.+|+++|+.|+++++.++++|||++.|.+..+.|++....+|++.|+||+|++.|++|+++|
T Consensus         2 ~~~sg~~~~~~~~~~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~~~~ra~~gg~~yl~~~~Ww~G~ltm~vGei~N   81 (335)
T KOG2922|consen    2 ASSSGSWRDEMKRMSSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGASGLRAGEGGYGYLKEPLWWAGMLTMIVGEIAN   81 (335)
T ss_pred             CCCCcchHHHHhhhccCceeeeeehhhccEEEeeehhhhHHHHHHHhhhcccccCCCcchhhhHHHHHHHHHHHHHhHhh
Confidence            4556665543  58999999999999999999999999999999987767777777889999999999999999999999


Q ss_pred             HHHHhhcchhhhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhcceeEEeecCCCCcccCHHHHHHHhcchhHHH
Q 019052           80 FAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPAEREIESVIEVWNLATEPAFLL  159 (347)
Q Consensus        80 ~~aL~~ap~slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~liv~~~~~~~~~~t~~el~~~~~~~~fl~  159 (347)
                      ++||+|||+++|+|||++++++++++++++||||++..+.+|+++|++|.++++.++|++++..|++|+++++++|+|++
T Consensus        82 FaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~el~~~~~~~~Fli  161 (335)
T KOG2922|consen   82 FAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEEVWELATEPGFLV  161 (335)
T ss_pred             HHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccccHHHHHHHhcCccHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhccccCcchhHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHH
Q 019052          160 YAALVITAVFILIFHYIPQYGQTHIMVYIGVCSLVGSLSVMSVKAIGIALKLTLSGMNQLIYPQTWAFTLIVIVCVLTQM  239 (347)
Q Consensus       160 y~~~~~~~~~~l~~~~~~r~g~~~~l~y~~~~gllgg~t~l~~K~v~~~l~~~~~g~~~~~~~~~y~ll~~~v~~~l~Q~  239 (347)
                      |+.+.+++.+++++++.||+|+++++.|..+|+++|++|++++|+++++++++++|.+|+.+|.+|.++.+++.|+..|+
T Consensus       162 y~~~iil~~~il~~~~~p~~g~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~~ql~~~~ty~~~l~~~~~~~~Q~  241 (335)
T KOG2922|consen  162 YVIIIILIVLILIFFYAPRYGQTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGNNQLFYPLTWIFLLVVATCVSTQM  241 (335)
T ss_pred             HHHHHHHHHHHHheeecccccccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCCcccccHHHHHHHHHHHHHHHHHH
Confidence            99999988888889999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcccCcceehhhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCcc
Q 019052          240 NYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKTKDLGDGSSLTPSMS  319 (347)
Q Consensus       240 ~~ln~aL~~~da~~vvP~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~lG~~l~i~GVvlLs~~~~~~~~~~~~~~~~  319 (347)
                      .|+||||+.||+++|.|++|++||..++++|.|+|+||++.+..+..++++|+..++.|+++|.+.+|.+..-.-.++|+
T Consensus       242 ~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~flL~~~kd~~~~~~s~~~~~  321 (335)
T KOG2922|consen  242 NYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFLGIFLLHRTKDMEISLASYNSMS  321 (335)
T ss_pred             HHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhheeeEeeeecccccccccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999998876665556665


Q ss_pred             ccccCCCCCCC
Q 019052          320 LRLSKHADDDD  330 (347)
Q Consensus       320 ~~~~~~~~~~~  330 (347)
                          +.+|+.|
T Consensus       322 ----~~~~~~~  328 (335)
T KOG2922|consen  322 ----KIIETSP  328 (335)
T ss_pred             ----cccccCc
Confidence                5555554

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=100.00  E-value=3.5e-62  Score=469.82  Aligned_cols=299  Identities=46%  Similarity=0.818  Sum_probs=283.6

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhHhhhhhhccCCcccCCcccccccchhHHHHHHHHHHHHHHHHHHHhhcchhhhh
Q 019052           13 MSSDNIKGLILALSSSIFIGSSFIVKKKGLKKAGASGVRAGFGGYSYLYEPLWWVGMITMVVGEIANFAAYAFAPAILVT   92 (347)
Q Consensus        13 ~~s~~~iGv~lal~sa~~~a~G~~lqk~~~~~~~~~~~~~~~~~~~~l~~p~W~~G~~l~~~g~~~~~~aL~~ap~slv~   92 (347)
                      |.+++++|+.+|++||+++++|.++|||++.|+++++.|.+...++|+|||+||.|+.++++|++++++||+++|+++||
T Consensus         1 ~~~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~~~~~~~l~~~~W~~G~~~~~~g~~~~~~Al~~ap~slv~   80 (300)
T PF05653_consen    1 MNTDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAGSGGRSYLRRPLWWIGLLLMVLGEILNFVALGFAPASLVA   80 (300)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHhhHHHHHHHHHHhcchHHHHHHHHhhhHHHHH
Confidence            45789999999999999999999999999999887655544456799999999999999999999999999999999999


Q ss_pred             cchhHHHHHHHHHHHHHhccccccchhhHHHHHhhcceeEEeecCCCCcccCHHHHHHHhcchhHHHHHHHHHHHHHHHH
Q 019052           93 PLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPAEREIESVIEVWNLATEPAFLLYAALVITAVFILI  172 (347)
Q Consensus        93 Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~liv~~~~~~~~~~t~~el~~~~~~~~fl~y~~~~~~~~~~l~  172 (347)
                      |++++++++|++++++++|||++++|++|++++++|+++++.++|++++.++.+|+.+++++|.|+.|+.+..++.+.++
T Consensus        81 Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~~~l~~~~~~~~fl~y~~~~~~~~~~L~  160 (300)
T PF05653_consen   81 PLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHTLDELIALLSQPGFLVYFILVLVLILILI  160 (300)
T ss_pred             HHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCCHHHHHHHhcCcceehhHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999988877777777


Q ss_pred             HhhccccCcchhHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCcc
Q 019052          173 FHYIPQYGQTHIMVYIGVCSLVGSLSVMSVKAIGIALKLTLSGMNQLIYPQTWAFTLIVIVCVLTQMNYLNMALDTFNTA  252 (347)
Q Consensus       173 ~~~~~r~g~~~~l~y~~~~gllgg~t~l~~K~v~~~l~~~~~g~~~~~~~~~y~ll~~~v~~~l~Q~~~ln~aL~~~da~  252 (347)
                      +...+|+|+++.+.|..+|+++|+++++++|++++.++++++|++||.+|.+|.++++++.+++.|++|+|+||++||++
T Consensus       161 ~~~~~r~g~~~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~~~f~~~~~y~l~~~~v~~~~~Q~~~LN~aL~~fd~~  240 (300)
T PF05653_consen  161 FFIKPRYGRRNILVYISICSLIGSFTVLSAKAISILIKLTFSGDNQFTYPLTYLLLLVLVVTAVLQLYYLNKALKRFDTS  240 (300)
T ss_pred             HhhcchhcccceEEEEEEeccccchhhhHHHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccce
Confidence            77788889999999999999999999999999999999888899999999999999999999999999999999999999


Q ss_pred             eehhhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHhhhccCCCCCCC
Q 019052          253 VVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKTKDLGDG  311 (347)
Q Consensus       253 ~vvP~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~lG~~l~i~GVvlLs~~~~~~~~  311 (347)
                      .++|++||+||.+++++|+++|||+.+++++++.++.+|+++++.||++|++++|.+..
T Consensus       241 ~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~lL~~~~~~~~~  299 (300)
T PF05653_consen  241 LVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFLLSSSKDKEIS  299 (300)
T ss_pred             EEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhheeeccCchhcc
Confidence            99999999999999999999999999999999999999999999999999999987653

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.34  E-value=3.9e-10  Score=107.31  Aligned_cols=253  Identities=18%  Similarity=0.175  Sum_probs=146.1

Q ss_pred             HHHHHHHHHHHHHHHHHhHhhhhhhccCCc--cc-C-------------CcccccccchhH---HHHHHHHHHHHHHHHH
Q 019052           21 LILALSSSIFIGSSFIVKKKGLKKAGASGV--RA-G-------------FGGYSYLYEPLW---WVGMITMVVGEIANFA   81 (347)
Q Consensus        21 v~lal~sa~~~a~G~~lqk~~~~~~~~~~~--~~-~-------------~~~~~~l~~p~W---~~G~~l~~~g~~~~~~   81 (347)
                      .++.+.++++.|..+.+.|+...++..-..  .. .             ...++..++..|   ..+.........+...
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKEPDFLWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQ   82 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHH
Confidence            567888899999999999976554321000  00 0             000111111122   1223334566678888


Q ss_pred             HHhhcchhhhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhcceeEEeecCCCCcccCHHHHHHHhcchhHHHHH
Q 019052           82 AYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPAEREIESVIEVWNLATEPAFLLYA  161 (347)
Q Consensus        82 aL~~ap~slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~liv~~~~~~~~~~t~~el~~~~~~~~fl~y~  161 (347)
                      ++...|.+.++|+...+.+++.+++.+++|||+++++|.|+.++..|+.++..  ++.+. .+.         ... .+.
T Consensus        83 a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~--~~~~~-~~~---------~g~-~~~  149 (281)
T TIGR03340        83 AYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL--SRFAQ-HRR---------KAY-AWA  149 (281)
T ss_pred             HHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc--ccccc-cch---------hHH-HHH
Confidence            99999999999999999999999999999999999999999999999987643  22111 110         111 111


Q ss_pred             HHHHHHHHHHHHhh-ccccCcc-h----hHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCcccc-hhHHHHHHHHHHHH
Q 019052          162 ALVITAVFILIFHY-IPQYGQT-H----IMVYIGVCSLVGSLSVMSVKAIGIALKLTLSGMNQLI-YPQTWAFTLIVIVC  234 (347)
Q Consensus       162 ~~~~~~~~~l~~~~-~~r~g~~-~----~l~y~~~~gllgg~t~l~~K~v~~~l~~~~~g~~~~~-~~~~y~ll~~~v~~  234 (347)
                      ..  ...+...+.. .|+..++ +    ...+...+.+.++.......     .  ..++..... .+..+.++.....+
T Consensus       150 l~--aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~~~~  220 (281)
T TIGR03340       150 LA--AALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLY-----L--KRHGRSMFPYARQILPSATLGGLM  220 (281)
T ss_pred             HH--HHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHH-----H--HHhccchhhhHHHHHHHHHHHHHH
Confidence            11  1111112222 2322111 1    11121222222211111000     0  001111111 22222233333344


Q ss_pred             HHHHHHHHHHhhcccCcceehhhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHhhh
Q 019052          235 VLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLL  302 (347)
Q Consensus       235 ~l~Q~~~ln~aL~~~da~~vvP~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~lG~~l~i~GVvlL  302 (347)
                      ......+.++++++.+++.+.+..|. .++++++.|.++++|..+      .....|..+++.|++++
T Consensus       221 s~l~~~l~~~al~~~~a~~~~~~~~l-~pv~a~l~g~~~lgE~~~------~~~~iG~~lil~Gv~l~  281 (281)
T TIGR03340       221 IGGAYALVLWAMTRLPVATVVALRNT-SIVFAVVLGIWFLNERWY------LTRLMGVCIIVAGLVVL  281 (281)
T ss_pred             HHHHHHHHHHHHhhCCceEEEeeccc-HHHHHHHHHHHHhCCCcc------HHHHHHHHHHHHhHHhC
Confidence            44445567899999999999998877 489999999999999764      34567888888898875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=99.18  E-value=8e-11  Score=100.39  Aligned_cols=116  Identities=17%  Similarity=0.181  Sum_probs=96.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHhHhhhhhhccCCcccCC-cccccccch--hHHHHHHHHHHHHHHHHHHHhhcchhhhhcch
Q 019052           19 KGLILALSSSIFIGSSFIVKKKGLKKAGASGVRAGF-GGYSYLYEP--LWWVGMITMVVGEIANFAAYAFAPAILVTPLG   95 (347)
Q Consensus        19 iGv~lal~sa~~~a~G~~lqk~~~~~~~~~~~~~~~-~~~~~l~~p--~W~~G~~l~~~g~~~~~~aL~~ap~slv~Pl~   95 (347)
                      +|.++.+.+.++.+.||.+.|+++.+.++.+..... .......+|  .-+.|+.++++++.++..+++..|+++..|+.
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~~~~~~~~~~~p~~~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~   81 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHAWDFIAALLAFGLALRAVLLGLAGYALSMLCWLKALRYLPLSRAYPLL   81 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccchhHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHH
Confidence            467888999999999999999999886543211100 011235567  78899999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHH--HhccccccchhhHHHHHhhcceeEEe
Q 019052           96 ALSIIISAALAHI--ILRERLHIFGILGCILCVVGSTTIVL  134 (347)
Q Consensus        96 ~~~lv~~~~la~~--~l~E~~~~~~~~G~~li~~G~~liv~  134 (347)
                      +..+++..+.+..  ++||+++.++++|+++|++|++++..
T Consensus        82 sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~  122 (129)
T PRK02971         82 SLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINL  122 (129)
T ss_pred             HHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhcc
Confidence            9999888888886  79999999999999999999998743

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.03  E-value=2.2e-07  Score=89.31  Aligned_cols=259  Identities=17%  Similarity=0.227  Sum_probs=141.3

Q ss_pred             HHHHHHHHHHHHHHHHhHhhhhhhccC---CcccC---Ccccccc---cch-hHHH--HHHHHHHHHHHHHHHHhh-cch
Q 019052           22 ILALSSSIFIGSSFIVKKKGLKKAGAS---GVRAG---FGGYSYL---YEP-LWWV--GMITMVVGEIANFAAYAF-APA   88 (347)
Q Consensus        22 ~lal~sa~~~a~G~~lqk~~~~~~~~~---~~~~~---~~~~~~l---~~p-~W~~--G~~l~~~g~~~~~~aL~~-ap~   88 (347)
                      .++++++++.+......|.+..+.+..   ..|-.   .....+.   |++ ..+.  |+........+.+.++.. .|.
T Consensus         7 l~~l~~~~~Wg~~~~~~k~~~~~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a   86 (299)
T PRK11453          7 VLALLVVVVWGLNFVVIKVGLHNMPPLMLAGLRFMLVAFPAIFFVARPKVPLNLLLGYGLTISFGQFAFLFCAINFGMPA   86 (299)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCH
Confidence            456777888888888888766432211   01100   0000000   111 1122  222222333455666766 477


Q ss_pred             hhhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhcceeEEeecCCCCcccCHHHHHHHhcchhHHHHHHHHHHHH
Q 019052           89 ILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPAEREIESVIEVWNLATEPAFLLYAALVITAV  168 (347)
Q Consensus        89 slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~liv~~~~~~~~~~t~~el~~~~~~~~fl~y~~~~~~~~  168 (347)
                      +...-+..+..+++.+++++++|||+++++++|.++..+|+.++... ..++...+.         ... .+. +... +
T Consensus        87 ~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~-~~~~~~~~~---------~G~-~l~-l~aa-l  153 (299)
T PRK11453         87 GLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIED-SLNGQHVAM---------LGF-MLT-LAAA-F  153 (299)
T ss_pred             HHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccc-cCCCcchhH---------HHH-HHH-HHHH-H
Confidence            88888888999999999999999999999999999999999877532 111111100         011 111 1111 1


Q ss_pred             HHHHH-hhccccCcc----hhHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCc------ccchhHHHH-HHHHHHHHHH
Q 019052          169 FILIF-HYIPQYGQT----HIMVYIGVCSLVGSLSVMSVKAIGIALKLTLSGMN------QLIYPQTWA-FTLIVIVCVL  236 (347)
Q Consensus       169 ~~l~~-~~~~r~g~~----~~l~y~~~~gllgg~t~l~~K~v~~~l~~~~~g~~------~~~~~~~y~-ll~~~v~~~l  236 (347)
                      +...+ ...++..++    ....+.....+++......   .+. .   .++.+      ...++..|. ++...+.+..
T Consensus       154 ~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~---~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~  226 (299)
T PRK11453        154 SWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFV---ASL-I---LDGSATMIHSLVTIDMTTILSLMYLAFVATI  226 (299)
T ss_pred             HHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHH---HHH-H---hcCchhhhhhhccCCHHHHHHHHHHHHHHHH
Confidence            11111 112221111    1122222222222211110   000 0   11111      112233333 3344456667


Q ss_pred             HHHHHHHHhhcccCcceehhhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHhhhccCCC
Q 019052          237 TQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKTKD  307 (347)
Q Consensus       237 ~Q~~~ln~aL~~~da~~vvP~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~lG~~l~i~GVvlLs~~~~  307 (347)
                      .+....++++++.++..+.++ ....|+++++.|.+++||...      .....|.+++++|+++....+.
T Consensus       227 ~~~~l~~~~l~~~~a~~~s~~-~~l~Pv~a~~~~~l~lgE~~~------~~~~iG~~lI~~gv~l~~~~~~  290 (299)
T PRK11453        227 VGYGIWGTLLGRYETWRVAPL-SLLVPVVGLASAALLLDERLT------GLQFLGAVLIMAGLYINVFGLR  290 (299)
T ss_pred             HHHHHHHHHHHhCCHHHHHHH-HHHHHHHHHHHHHHHhCCCcc------HHHHHHHHHHHHHHHHHhcchh
Confidence            777788999999998877765 457799999999999999754      3446788888899988765443

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.03  E-value=1.5e-07  Score=92.31  Aligned_cols=233  Identities=16%  Similarity=0.242  Sum_probs=133.2

Q ss_pred             cccchhHHHHH--HHHHHHHHHHHHHHhhcchhhhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhcceeEEeec
Q 019052           59 YLYEPLWWVGM--ITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHA  136 (347)
Q Consensus        59 ~l~~p~W~~G~--~l~~~g~~~~~~aL~~ap~slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~liv~~~  136 (347)
                      .+++++|.-=+  ++.+.++.+...|+.+.+++-+|=+.+.+++|+++++.++||||.+..+++|++++++|+++++...
T Consensus        74 ~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD  153 (334)
T PF06027_consen   74 VLKRPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSD  153 (334)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeec
Confidence            35555554333  2356888999999999999999999999999999999999999999999999999999999887664


Q ss_pred             CCCCccc-CHHHHHHHhcchhHHHHHHHHHHHHHHHHHhh-ccc-cCcchhHHHHHHHHHhhHHHHHHHHHHHHHHHHHh
Q 019052          137 PAEREIE-SVIEVWNLATEPAFLLYAALVITAVFILIFHY-IPQ-YGQTHIMVYIGVCSLVGSLSVMSVKAIGIALKLTL  213 (347)
Q Consensus       137 ~~~~~~~-t~~el~~~~~~~~fl~y~~~~~~~~~~l~~~~-~~r-~g~~~~l~y~~~~gllgg~t~l~~K~v~~~l~~~~  213 (347)
                      ...++.. +.       +++..--.+. +...++-....+ .++ -++.....+.+--|++|.+-.. .....  +.  .
T Consensus       154 ~~~~~~~~~~-------~~~i~GDll~-l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~-iq~~i--le--~  220 (334)
T PF06027_consen  154 VLSGSDSSSG-------SNPILGDLLA-LLGAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISG-IQLAI--LE--R  220 (334)
T ss_pred             ccccccCCCC-------CccchhHHHH-HHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHH-HHHHh--ee--h
Confidence            3222111 00       0111100011 111111111111 111 1222223344444444433211 11111  00  1


Q ss_pred             cCCcccc-hhHHHHHHHHHHHHHHHHHHHHHHhhcccCcceehhhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHH
Q 019052          214 SGMNQLI-YPQTWAFTLIVIVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGF  292 (347)
Q Consensus       214 ~g~~~~~-~~~~y~ll~~~v~~~l~Q~~~ln~aL~~~da~~vvP~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~lG~  292 (347)
                      ++...+. ++....+++....+...=-...+-.++..+|+.+ .+---.-+..+++.|+.+||+..+      ....+|.
T Consensus       221 ~~i~~~~w~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~-nLsLLTsd~~ali~~i~~f~~~~~------~ly~~af  293 (334)
T PF06027_consen  221 SGIESIHWTSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFF-NLSLLTSDFYALIIDIFFFGYKFS------WLYILAF  293 (334)
T ss_pred             hhhhccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhCcccee-ehHHHHhhHHHHHHHHHhcCcccc------HHHHHHH
Confidence            1211121 3333333333333322212233556777777633 333344567789999999999643      3577888


Q ss_pred             HHHHHHHhhhccCCCCCCC
Q 019052          293 VTILAGTFLLHKTKDLGDG  311 (347)
Q Consensus       293 ~l~i~GVvlLs~~~~~~~~  311 (347)
                      ++++.|+++....+++.++
T Consensus       294 ~lIiiG~vvy~~~~~~~~~  312 (334)
T PF06027_consen  294 ALIIIGFVVYNLAESPEEE  312 (334)
T ss_pred             HHHHHHhheEEccCCcccc
Confidence            9999999999876654433

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.00  E-value=8.6e-08  Score=92.01  Aligned_cols=233  Identities=15%  Similarity=0.085  Sum_probs=134.3

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhHhhhhhhccC---Cccc--C--------------CcccccccchhH----HHHHHH
Q 019052           15 SDNIKGLILALSSSIFIGSSFIVKKKGLKKAGAS---GVRA--G--------------FGGYSYLYEPLW----WVGMIT   71 (347)
Q Consensus        15 s~~~iGv~lal~sa~~~a~G~~lqk~~~~~~~~~---~~~~--~--------------~~~~~~l~~p~W----~~G~~l   71 (347)
                      .+...|+.++++++++.+.....-|.. .+.+..   -.|.  +              ...++..+++++    ..|...
T Consensus         4 ~~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (296)
T PRK15430          4 KQTRQGVLLALAAYFIWGIAPAYFKLI-YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVL   82 (296)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHH
Confidence            355678899999999888888888753 221100   0000  0              000001112322    245556


Q ss_pred             HHHHHHHHHHHHhhcchhhhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhcceeEEeecCCCCcccCHHHHHHH
Q 019052           72 MVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPAEREIESVIEVWNL  151 (347)
Q Consensus        72 ~~~g~~~~~~aL~~ap~slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~liv~~~~~~~~~~t~~el~~~  151 (347)
                      ..++..+.+.++...|.+...-+..+..++..+++.+++|||+++++|.|+++..+|++++..  +. ++.         
T Consensus        83 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~--~~-~~~---------  150 (296)
T PRK15430         83 IGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLW--TF-GSL---------  150 (296)
T ss_pred             HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH--Hc-CCc---------
Confidence            677889999999999999999999999999999999999999999999999999999987642  21 110         


Q ss_pred             hcchhHHHHHHHHHHHHHHHHHh-hccccCcch-h-HHHHH-HHHHhhHHHHHHHHHHHHHHHHHhcCCccc-c-hhHHH
Q 019052          152 ATEPAFLLYAALVITAVFILIFH-YIPQYGQTH-I-MVYIG-VCSLVGSLSVMSVKAIGIALKLTLSGMNQL-I-YPQTW  225 (347)
Q Consensus       152 ~~~~~fl~y~~~~~~~~~~l~~~-~~~r~g~~~-~-l~y~~-~~gllgg~t~l~~K~v~~~l~~~~~g~~~~-~-~~~~y  225 (347)
                         +   .+ .+. ...+...+. ..+|...+. . ..... ....++....         +.....+.... . .+..+
T Consensus       151 ---~---~~-~l~-aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~  213 (296)
T PRK15430        151 ---P---II-ALG-LAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYL---------FAIADSSTSHMGQNPMSLN  213 (296)
T ss_pred             ---c---HH-HHH-HHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH---------HHHccCCcccccCCcHHHH
Confidence               0   01 111 111111121 223322111 1 01110 0001111100         00000111111 1 12222


Q ss_pred             HHHHH-HHHHHHHHHHHHHHhhcccCcceehhhHHHHHHHHHHHHHHHHhcccCC
Q 019052          226 AFTLI-VIVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDR  279 (347)
Q Consensus       226 ~ll~~-~v~~~l~Q~~~ln~aL~~~da~~vvP~~~v~~~~~~i~~G~i~f~E~~~  279 (347)
                      .++.. .+.+.+.| .+.|+++++.+++.+.+..|. .++++++.|..++||..+
T Consensus       214 ~~~~~~g~~t~i~~-~~~~~a~~~~~a~~~s~~~~l-~Pv~a~~~g~l~l~E~~~  266 (296)
T PRK15430        214 LLLIAAGIVTTVPL-LCFTAAATRLRLSTLGFFQYI-GPTLMFLLAVTFYGEKPG  266 (296)
T ss_pred             HHHHHHHHHHHHHH-HHHHHHHhcCCHHHHHHHHHH-HHHHHHHHHHHHHcCCCC
Confidence            22222 33445544 478999999999977777665 699999999999999754

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.95  E-value=1.1e-07  Score=94.27  Aligned_cols=220  Identities=12%  Similarity=0.162  Sum_probs=119.8

Q ss_pred             HHHHHHHHHhhcchhhhhcchhHHHHHHHHHHHHH------hccccccchhhHHHHHhhcceeEEeecCCC------Ccc
Q 019052           75 GEIANFAAYAFAPAILVTPLGALSIIISAALAHII------LRERLHIFGILGCILCVVGSTTIVLHAPAE------REI  142 (347)
Q Consensus        75 g~~~~~~aL~~ap~slv~Pl~~~~lv~~~~la~~~------l~E~~~~~~~~G~~li~~G~~liv~~~~~~------~~~  142 (347)
                      .+.+...++.+.|.+...-+..+..+|++++++++      +|||+++++++|+++..+|+.++.......      ++.
T Consensus        91 ~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~  170 (358)
T PLN00411         91 YVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPY  170 (358)
T ss_pred             HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccccccccc
Confidence            33467889999999999999999999999999999      699999999999999999998764322110      000


Q ss_pred             cCHHHHH--HHhcchhHHHHHHHH-HHHHHHHHH-hhccccCcc--hhHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcC-
Q 019052          143 ESVIEVW--NLATEPAFLLYAALV-ITAVFILIF-HYIPQYGQT--HIMVYIGVCSLVGSLSVMSVKAIGIALKLTLSG-  215 (347)
Q Consensus       143 ~t~~el~--~~~~~~~fl~y~~~~-~~~~~~l~~-~~~~r~g~~--~~l~y~~~~gllgg~t~l~~K~v~~~l~~~~~g-  215 (347)
                      .+..+..  ..........-..+. ...++...+ ...+|..++  ....+.....+.++......   + .+   .++ 
T Consensus       171 ~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~---~-l~---~~~~  243 (358)
T PLN00411        171 LNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMI---G-LV---VEKN  243 (358)
T ss_pred             ccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHH---H-HH---HccC
Confidence            0000000  000001111000111 111111111 112221111  11122222222222221110   0 01   111 


Q ss_pred             -Ccc-cchh--HHHHHHHHHHHHHHHHHHHHHHhhcccCcceehhhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHH
Q 019052          216 -MNQ-LIYP--QTWAFTLIVIVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCG  291 (347)
Q Consensus       216 -~~~-~~~~--~~y~ll~~~v~~~l~Q~~~ln~aL~~~da~~vvP~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~lG  291 (347)
                       ... ..+|  ..+.++...+.+.+ -..+.|+++++-+++.+... .-..|+++++.|.++++|...      ...++|
T Consensus       244 ~~~~~~~~~~~~~~~i~y~~i~t~l-ay~lw~~~v~~~ga~~as~~-~~L~PV~a~llg~l~LgE~lt------~~~~iG  315 (358)
T PLN00411        244 NPSVWIIHFDITLITIVTMAIITSV-YYVIHSWTVRHKGPLYLAIF-KPLSILIAVVMGAIFLNDSLY------LGCLIG  315 (358)
T ss_pred             CcccceeccchHHHHHHHHHHHHHH-HHHHHHHHHhccCchHHHHH-HhHHHHHHHHHHHHHhCCCCc------HHHHHH
Confidence             111 1111  22222222233333 33467999999988755444 455699999999999999764      445588


Q ss_pred             HHHHHHHHhhhccCCCCC
Q 019052          292 FVTILAGTFLLHKTKDLG  309 (347)
Q Consensus       292 ~~l~i~GVvlLs~~~~~~  309 (347)
                      .++++.|+.+..+.+.++
T Consensus       316 ~~LIl~Gv~l~~~~~~~~  333 (358)
T PLN00411        316 GILITLGFYAVMWGKANE  333 (358)
T ss_pred             HHHHHHHHHHHHhhhhhh
Confidence            899999999988655544

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.95  E-value=5.9e-07  Score=86.21  Aligned_cols=262  Identities=14%  Similarity=0.117  Sum_probs=133.3

Q ss_pred             HHHHHHHHHHHHHHHHHhHhhhhhhccC---Cccc--CC------cccccccc---hhHHHHHHHHHHHHHHHHHHHhh-
Q 019052           21 LILALSSSIFIGSSFIVKKKGLKKAGAS---GVRA--GF------GGYSYLYE---PLWWVGMITMVVGEIANFAAYAF-   85 (347)
Q Consensus        21 v~lal~sa~~~a~G~~lqk~~~~~~~~~---~~~~--~~------~~~~~l~~---p~W~~G~~l~~~g~~~~~~aL~~-   85 (347)
                      .++++.+.++.+......|.+....+.-   ..|-  +.      ..++-.++   +....|.+.+.....+.+.++.+ 
T Consensus         6 ~l~~l~a~~~Wg~~~~~~k~~~~~~~P~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~~   85 (295)
T PRK11689          6 TLIGLIAILLWSTMVGLIRGVSESLGPVGGAAMIYSVSGLLLLLTVGFPRLRQFPKRYLLAGGLLFVSYEICLALSLGYA   85 (295)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHhHHHHHHHHHHHHHHHHh
Confidence            4556666677777777777655443210   0000  00      00000111   12233333333444455555544 


Q ss_pred             ---cchhhhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhcceeEEeecCCCCcccCHHHHHHHhcchhHHHHHH
Q 019052           86 ---APAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPAEREIESVIEVWNLATEPAFLLYAA  162 (347)
Q Consensus        86 ---ap~slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~liv~~~~~~~~~~t~~el~~~~~~~~fl~y~~  162 (347)
                         .+.....-+..+..++..+++++++|||+++++|.|+++..+|++++...++..    +.++......+.. .-...
T Consensus        86 ~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~----~~~~~~~~~~~~~-~G~~~  160 (295)
T PRK11689         86 NTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGL----SLAELINNIASNP-LSYGL  160 (295)
T ss_pred             hccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccc----hhhhhhhccccCh-HHHHH
Confidence               355555667788899999999999999999999999999999998776432110    1111100000000 00011


Q ss_pred             HHHHHHHHHHH-hhccccCc-chhHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcC-CcccchhHHHHHHHHHHHHHHHHH
Q 019052          163 LVITAVFILIF-HYIPQYGQ-THIMVYIGVCSLVGSLSVMSVKAIGIALKLTLSG-MNQLIYPQTWAFTLIVIVCVLTQM  239 (347)
Q Consensus       163 ~~~~~~~~l~~-~~~~r~g~-~~~l~y~~~~gllgg~t~l~~K~v~~~l~~~~~g-~~~~~~~~~y~ll~~~v~~~l~Q~  239 (347)
                      ......+...+ ...+|..+ .++..+..   ..++.....    ..    ..++ ...-.++..|..++....+...-.
T Consensus       161 ~l~aa~~~A~~~v~~k~~~~~~~~~~~~~---~~~~~~l~~----~~----~~~~~~~~~~~~~~~~~l~~~~~~t~~~~  229 (295)
T PRK11689        161 AFIGAFIWAAYCNVTRKYARGKNGITLFF---ILTALALWI----KY----FLSPQPAMVFSLPAIIKLLLAAAAMGFGY  229 (295)
T ss_pred             HHHHHHHHHHHHHHHhhccCCCCchhHHH---HHHHHHHHH----HH----HHhcCccccCCHHHHHHHHHHHHHHHHHH
Confidence            11111111111 12233322 22222211   111111100    00    0112 111123334433333222333334


Q ss_pred             HHHHHhhcccCcceehhhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHhhhccC
Q 019052          240 NYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKT  305 (347)
Q Consensus       240 ~~ln~aL~~~da~~vvP~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~lG~~l~i~GVvlLs~~  305 (347)
                      .+.|+++++.+++.+.+..+ ..|+++++.|.+++||..+      .....|.++++.|+++.-..
T Consensus       230 ~l~~~al~~~~a~~~s~~~~-l~Pv~a~i~~~~~lgE~~~------~~~~iG~~lI~~gv~~~~~~  288 (295)
T PRK11689        230 AAWNVGILHGNMTLLATASY-FTPVLSAALAALLLSTPLS------FSFWQGVAMVTAGSLLCWLA  288 (295)
T ss_pred             HHHHHHHHccCHHHHHHHHH-hHHHHHHHHHHHHhCCCCc------HHHHHHHHHHHHhHHHHhhh
Confidence            55699999999886666655 4699999999999999764      45567888888888766543

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.94  E-value=2.2e-07  Score=86.48  Aligned_cols=203  Identities=15%  Similarity=0.155  Sum_probs=120.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcchhhhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhcceeEEeecCCCCcccCH
Q 019052           66 WVGMITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPAEREIESV  145 (347)
Q Consensus        66 ~~G~~l~~~g~~~~~~aL~~ap~slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~liv~~~~~~~~~~t~  145 (347)
                      ..|.....+...+.+.++...|.+.+.++..+..+++.+++.+++|||++++++.|+.+.+.|+.++...+  +.+. + 
T Consensus        51 ~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~--~~~~-~-  126 (260)
T TIGR00950        51 LLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDG--NLSI-N-  126 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCC--cccc-c-
Confidence            55666677888899999999999999999999999999999999999999999999999999998875332  1111 0 


Q ss_pred             HHHHHHhcchhHHHHHHHHHHHHHHHHHh-hccccCc-ch---hHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCcccc
Q 019052          146 IEVWNLATEPAFLLYAALVITAVFILIFH-YIPQYGQ-TH---IMVYIGVCSLVGSLSVMSVKAIGIALKLTLSGMNQLI  220 (347)
Q Consensus       146 ~el~~~~~~~~fl~y~~~~~~~~~~l~~~-~~~r~g~-~~---~l~y~~~~gllgg~t~l~~K~v~~~l~~~~~g~~~~~  220 (347)
                        .      ... .+. +. ..++...+. ..++..+ .+   ...+. .....++.... .-.       ...+.....
T Consensus       127 --~------~G~-~~~-l~-a~~~~a~~~~~~k~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~~-------~~~~~~~~~  186 (260)
T TIGR00950       127 --P------AGL-LLG-LG-SGISFALGTVLYKRLVKKEGPELLQFTG-WVLLLGALLLL-PFA-------WFLGPNPQA  186 (260)
T ss_pred             --H------HHH-HHH-HH-HHHHHHHHHHHHhHHhhcCCchHHHHHH-HHHHHHHHHHH-HHH-------HhcCCCCCc
Confidence              0      111 111 11 111111111 1222111 11   12221 11112211111 000       112211122


Q ss_pred             hhHHHHH-HHHHHHHHHHHHHHHHHhhcccCcceehhhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHH
Q 019052          221 YPQTWAF-TLIVIVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGT  299 (347)
Q Consensus       221 ~~~~y~l-l~~~v~~~l~Q~~~ln~aL~~~da~~vvP~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~lG~~l~i~GV  299 (347)
                      ++..|.. +...+.+........++++++.++..+..+.+ ..++.+++.+.+++||..+  +    ....|..+++.|+
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~-~~pv~~~ll~~~~~~E~~~--~----~~~~G~~li~~g~  259 (260)
T TIGR00950       187 LSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILAL-AEPLVALLLGLLILGETLS--L----PQLIGGALIIAAV  259 (260)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHH-HHHHHHHHHHHHHhCCCCC--H----HHHHHHHHHHHhc
Confidence            4444432 22333333344445588999999887777665 5799999999999999653  3    3456666666665

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.91  E-value=7.1e-09  Score=86.13  Aligned_cols=103  Identities=11%  Similarity=0.148  Sum_probs=82.5

Q ss_pred             HHHHHHHHHHHHHHHHhHhhhhhhccCCcccCCcccccccchhHHHHH--HHHHHHHHHHHHHHhhcchhhhhcchhHHH
Q 019052           22 ILALSSSIFIGSSFIVKKKGLKKAGASGVRAGFGGYSYLYEPLWWVGM--ITMVVGEIANFAAYAFAPAILVTPLGALSI   99 (347)
Q Consensus        22 ~lal~sa~~~a~G~~lqk~~~~~~~~~~~~~~~~~~~~l~~p~W~~G~--~l~~~g~~~~~~aL~~ap~slv~Pl~~~~l   99 (347)
                      ++-+++.++...|+.+.|++.+..+..         .-.+++..+.+.  .++.+++.++..++...|+++.+|+.++++
T Consensus         4 ~~l~~ai~~ev~g~~~lK~s~~~~~~~---------~~~~~~l~~~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~   74 (111)
T PRK15051          4 LTLVFASLLSVAGQLCQKQATRPVAIG---------KRRKHIVLWLGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNF   74 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccCCcc---------hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHH
Confidence            445667788899999999985432110         011123345554  567889999999999999999999999999


Q ss_pred             HHHHHHHHHHhccccccchhhHHHHHhhcceeEE
Q 019052          100 IISAALAHIILRERLHIFGILGCILCVVGSTTIV  133 (347)
Q Consensus       100 v~~~~la~~~l~E~~~~~~~~G~~li~~G~~liv  133 (347)
                      +++.+++.+++|||++.++++|+.++++|++++.
T Consensus        75 v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         75 VWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999988653

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.89  E-value=2.3e-07  Score=88.81  Aligned_cols=211  Identities=10%  Similarity=0.046  Sum_probs=123.1

Q ss_pred             HHHHHHHHHHHHHHHHH-hhcchhhhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhcceeEEeecCCCCcccCH
Q 019052           67 VGMITMVVGEIANFAAY-AFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPAEREIESV  145 (347)
Q Consensus        67 ~G~~l~~~g~~~~~~aL-~~ap~slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~liv~~~~~~~~~~t~  145 (347)
                      .|......+..+...+. ...|.....-+..+..+++.+++.+ +|||+++++|.|..+..+|+.++...  ++.+. +.
T Consensus        74 ~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~--~~~~~-~~  149 (292)
T PRK11272         74 IGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSG--GNLSG-NP  149 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcC--ccccc-ch
Confidence            45554455566677777 8888888899999999999999975 79999999999999999998866321  11111 00


Q ss_pred             HHHHHHhcchhHHHHHHHHHHHHHHHHH-hhccccCcchhHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcC-CcccchhH
Q 019052          146 IEVWNLATEPAFLLYAALVITAVFILIF-HYIPQYGQTHIMVYIGVCSLVGSLSVMSVKAIGIALKLTLSG-MNQLIYPQ  223 (347)
Q Consensus       146 ~el~~~~~~~~fl~y~~~~~~~~~~l~~-~~~~r~g~~~~l~y~~~~gllgg~t~l~~K~v~~~l~~~~~g-~~~~~~~~  223 (347)
                               ... .+ .+... .+...+ ...+|..+++........-..++.....   ...    ..++ .....++.
T Consensus       150 ---------~G~-l~-~l~a~-~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~~~~  210 (292)
T PRK11272        150 ---------WGA-IL-ILIAS-ASWAFGSVWSSRLPLPVGMMAGAAEMLAAGVVLLI---ASL----LSGERLTALPTLS  210 (292)
T ss_pred             ---------HHH-HH-HHHHH-HHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHH---HHH----HcCCcccccCCHH
Confidence                     011 11 11111 111111 1233333222111111111122211110   000    0111 11222344


Q ss_pred             HHHHH-HHHHHHHHHHHHHHHHhhcccCcceehhhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHhhh
Q 019052          224 TWAFT-LIVIVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLL  302 (347)
Q Consensus       224 ~y~ll-~~~v~~~l~Q~~~ln~aL~~~da~~vvP~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~lG~~l~i~GVvlL  302 (347)
                      .|..+ ...+.+......+.++++++.+++.+... ....++.+++.|.++++|...      .....|.++++.|++++
T Consensus       211 ~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~-~~l~Pi~a~i~~~~~l~E~~t------~~~iiG~~lIi~gv~~~  283 (292)
T PRK11272        211 GFLALGYLAVFGSIIAISAYMYLLRNVRPALATSY-AYVNPVVAVLLGTGLGGETLS------PIEWLALGVIVFAVVLV  283 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHH-HHHHHHHHHHHHHHHcCCCCc------HHHHHHHHHHHHHHHHH
Confidence            44433 33344445556677889999988766655 556799999999999999753      34567888899999998


Q ss_pred             ccCCC
Q 019052          303 HKTKD  307 (347)
Q Consensus       303 s~~~~  307 (347)
                      ++++.
T Consensus       284 ~~~~~  288 (292)
T PRK11272        284 TLGKY  288 (292)
T ss_pred             HHHHh
Confidence            87654

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.86  E-value=2e-07  Score=89.52  Aligned_cols=223  Identities=11%  Similarity=0.127  Sum_probs=136.6

Q ss_pred             chhHHHHHHH---HHHHHHHHHHHHhhcchhhhhcchh-HHHHHHHHHHHHHhccccccch----hhHHHHHhhcceeEE
Q 019052           62 EPLWWVGMIT---MVVGEIANFAAYAFAPAILVTPLGA-LSIIISAALAHIILRERLHIFG----ILGCILCVVGSTTIV  133 (347)
Q Consensus        62 ~p~W~~G~~l---~~~g~~~~~~aL~~ap~slv~Pl~~-~~lv~~~~la~~~l~E~~~~~~----~~G~~li~~G~~liv  133 (347)
                      ...|..|++.   ...|++..+.|.....+++-.|+.. ++++++.+.+.+++||+.++++    +.|++++++|++++.
T Consensus        56 ~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~  135 (290)
T TIGR00776        56 LSIFLVGLLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTS  135 (290)
T ss_pred             cHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEE
Confidence            3455557766   7899999999999999999999999 9999999999999999999999    999999999988875


Q ss_pred             eecCCCCcccCHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhccccCcchhHH--HHHHHH-HhhHHHHHHHHHHHHHHH
Q 019052          134 LHAPAEREIESVIEVWNLATEPAFLLYAALVITAVFILIFHYIPQYGQTHIMV--YIGVCS-LVGSLSVMSVKAIGIALK  210 (347)
Q Consensus       134 ~~~~~~~~~~t~~el~~~~~~~~fl~y~~~~~~~~~~l~~~~~~r~g~~~~l~--y~~~~g-llgg~t~l~~K~v~~~l~  210 (347)
                      ...+++.+   .++..   ..+.=+.+..+. .+ ....+...+|+-..++..  +.-..| ++++....... .    +
T Consensus       136 ~~~~~~~~---~~~~~---~~~~Gi~~~l~s-g~-~y~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~----~  202 (290)
T TIGR00776       136 RSKDKSAG---IKSEF---NFKKGILLLLMS-TI-GYLVYVVVAKAFGVDGLSVLLPQAIGMVIGGIIFNLGH-I----L  202 (290)
T ss_pred             eccccccc---ccccc---chhhHHHHHHHH-HH-HHHHHHHHHHHcCCCcceehhHHHHHHHHHHHHHHHHH-h----c
Confidence            54322111   00000   001111121111 11 111122222211111111  112222 23333222111 0    0


Q ss_pred             HHhcCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCcceehhhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHH
Q 019052          211 LTLSGMNQLIYPQTWAFTLIVIVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMC  290 (347)
Q Consensus       211 ~~~~g~~~~~~~~~y~ll~~~v~~~l~Q~~~ln~aL~~~da~~vvP~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~l  290 (347)
                         .  ..+.....|..++..+.. ..+..+...+++++......++.....++++.+.|+.+++|..  ++.++..+.+
T Consensus       203 ---~--~~~~~~~~~~~~~~Gi~~-~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~--~~~~~~~~~i  274 (290)
T TIGR00776       203 ---A--KPLKKYAILLNILPGLMW-GIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKK--TKREMIAISV  274 (290)
T ss_pred             ---c--cchHHHHHHHHHHHHHHH-HHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCC--CcceeehhHH
Confidence               1  112222333333344443 5555556677774444445566666679999999999999976  5788999999


Q ss_pred             HHHHHHHHHhhhccC
Q 019052          291 GFVTILAGTFLLHKT  305 (347)
Q Consensus       291 G~~l~i~GVvlLs~~  305 (347)
                      |+++++.|+.+++-.
T Consensus       275 G~~lIi~~~~l~~~~  289 (290)
T TIGR00776       275 GIILIIIAANILGIG  289 (290)
T ss_pred             HHHHHHHHHHHHhcc
Confidence            999999999998754

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=98.73  E-value=1.9e-08  Score=83.66  Aligned_cols=105  Identities=17%  Similarity=0.170  Sum_probs=87.1

Q ss_pred             HHHHHHHHHHhHhhhhhhccCCcc--cCCcccccccchhHHHHHHHHHHHHHHHHHHHhhcchhhhhcch-hHHHHHHHH
Q 019052           28 SIFIGSSFIVKKKGLKKAGASGVR--AGFGGYSYLYEPLWWVGMITMVVGEIANFAAYAFAPAILVTPLG-ALSIIISAA  104 (347)
Q Consensus        28 a~~~a~G~~lqk~~~~~~~~~~~~--~~~~~~~~l~~p~W~~G~~l~~~g~~~~~~aL~~ap~slv~Pl~-~~~lv~~~~  104 (347)
                      +++.+..+.+.||+....++....  .-.+.+.+++||..++++++.-.|++..+..++-+|+|+..|+. +++++|+++
T Consensus         5 g~~WG~Tnpfik~g~~~~~~~~~~~~~~~~~~~Ll~n~~y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l   84 (113)
T PF10639_consen    5 GILWGCTNPFIKRGSSGLEKVKASLQLLQEIKFLLLNPKYIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTAL   84 (113)
T ss_pred             hHHhcCchHHHHHHHhhcCCccchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHH
Confidence            467788889999988765443111  11234568999999999999999999999999999999999995 999999999


Q ss_pred             HHHHHhccccccchhhHHHHHhhcceeE
Q 019052          105 LAHIILRERLHIFGILGCILCVVGSTTI  132 (347)
Q Consensus       105 la~~~l~E~~~~~~~~G~~li~~G~~li  132 (347)
                      .++++-+|..+++.++|+.+++.|+.+.
T Consensus        85 ~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   85 TGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            9977766677788899999999999875

Many members are annotated as potential transmembrane proteins.

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.73  E-value=9.8e-08  Score=80.62  Aligned_cols=109  Identities=27%  Similarity=0.380  Sum_probs=84.2

Q ss_pred             HHHHHHHHHHHHHHHHHhHhhhhhhcc---------------------CCcccCCcccccccchhH----HHHHHHHHHH
Q 019052           21 LILALSSSIFIGSSFIVKKKGLKKAGA---------------------SGVRAGFGGYSYLYEPLW----WVGMITMVVG   75 (347)
Q Consensus        21 v~lal~sa~~~a~G~~lqk~~~~~~~~---------------------~~~~~~~~~~~~l~~p~W----~~G~~l~~~g   75 (347)
                      .+.|+.+|++.+++.++-|-+.+..+.                     .++...   ..-...+.|    ..| +.-.++
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~---~~~~~~k~~lflilSG-la~gls   80 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQA---GGEIGPKSWLFLILSG-LAGGLS   80 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceec---ccccCcceehhhhHHH-HHHHHH
Confidence            478999999999999999988774321                     011100   000111122    233 445678


Q ss_pred             HHHHHHHHhhcchhhhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhcceeEE
Q 019052           76 EIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIV  133 (347)
Q Consensus        76 ~~~~~~aL~~ap~slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~liv  133 (347)
                      .++.+.|+..++.|.|.|+..++.++..+++..+||||++..+|+|+.+|++|++++.
T Consensus        81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            8899999999999999999999999999999999999999999999999999998774

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.72  E-value=4.9e-06  Score=77.50  Aligned_cols=212  Identities=18%  Similarity=0.246  Sum_probs=124.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcchhhhhcchhHHHHHHHHHHH-HHhccccccchhhHHHHHhhcceeEEeecCCCCcccC
Q 019052           66 WVGMITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAH-IILRERLHIFGILGCILCVVGSTTIVLHAPAEREIES  144 (347)
Q Consensus        66 ~~G~~l~~~g~~~~~~aL~~ap~slv~Pl~~~~lv~~~~la~-~~l~E~~~~~~~~G~~li~~G~~liv~~~~~~~~~~t  144 (347)
                      ..|......+..+.+.++...+.+..+++.....+++.+++. +++|||+++++|.|..+...|+.++...+..+.....
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~  153 (292)
T COG0697          74 LLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSL  153 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHH
Confidence            344455667888999999999999999999999999999997 7779999999999999999999977554433332100


Q ss_pred             HHHHHHHhcchhHHHHHHHHHHHHHHHHHhhccccCcchhHHHHH-HHHHhhHHHHHHHHHHHHHHHHHhcCCcccchhH
Q 019052          145 VIEVWNLATEPAFLLYAALVITAVFILIFHYIPQYGQTHIMVYIG-VCSLVGSLSVMSVKAIGIALKLTLSGMNQLIYPQ  223 (347)
Q Consensus       145 ~~el~~~~~~~~fl~y~~~~~~~~~~l~~~~~~r~g~~~~l~y~~-~~gllgg~t~l~~K~v~~~l~~~~~g~~~~~~~~  223 (347)
                                ... . ..+...+...+.....++..+........ .... +...      ...  .......+....+.
T Consensus       154 ----------~g~-~-~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------~~~--~~~~~~~~~~~~~~  212 (292)
T COG0697         154 ----------LGL-L-LALAAALLWALYTALVKRLSRLGPVTLALLLQLL-LALL------LLL--LFFLSGFGAPILSR  212 (292)
T ss_pred             ----------HHH-H-HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH-HHHH------HHH--HHHhccccccCCHH
Confidence                      011 1 11111111111111122211111111111 1111 0000      000  00011111222333


Q ss_pred             HHHHHHH-HHHHHHHHHHHHHHhhcccCcceehhhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHhhh
Q 019052          224 TWAFTLI-VIVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLL  302 (347)
Q Consensus       224 ~y~ll~~-~v~~~l~Q~~~ln~aL~~~da~~vvP~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~lG~~l~i~GVvlL  302 (347)
                      .|..+.. .+.+......+.++++++.++..+.+.. ...++.+++.+..+++|..+      .....|.++++.|+.+.
T Consensus       213 ~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~l~~~e~~~------~~~~~G~~li~~g~~l~  285 (292)
T COG0697         213 AWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLS-LLEPVFAALLGVLLLGEPLS------PAQLLGAALVVLGVLLA  285 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHH-HHHHHHHHHHHHHHhCCCCc------HHHHHHHHHHHHHHHHH
Confidence            3333322 2333334456667899999988777776 55688888899999999754      34556668888899888


Q ss_pred             ccC
Q 019052          303 HKT  305 (347)
Q Consensus       303 s~~  305 (347)
                      ..+
T Consensus       286 ~~~  288 (292)
T COG0697         286 SLR  288 (292)
T ss_pred             hcc
Confidence            866

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.69  E-value=1.2e-05  Score=77.12  Aligned_cols=255  Identities=14%  Similarity=0.100  Sum_probs=141.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhHhhhhhhccC---Cccc--CC--------cccccccchhH----HHHHHHHHHHHHH
Q 019052           16 DNIKGLILALSSSIFIGSSFIVKKKGLKKAGAS---GVRA--GF--------GGYSYLYEPLW----WVGMITMVVGEIA   78 (347)
Q Consensus        16 ~~~iGv~lal~sa~~~a~G~~lqk~~~~~~~~~---~~~~--~~--------~~~~~l~~p~W----~~G~~l~~~g~~~   78 (347)
                      +...|+.+.+++.++.+.+...-|.+....+..   ..|-  +.        ..+...++..|    +.|.. +.....+
T Consensus         9 ~~~~~~~~~~la~~~~~~~~~~~K~~~~~~~~~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~   87 (293)
T PRK10532          9 PVWLPILLLLIAMASIQSGASLAKSLFPLVGAPGVTALRLALGTLILIAIFKPWRLRFAKEQRLPLLFYGVS-LGGMNYL   87 (293)
T ss_pred             ccchHHHHHHHHHHHHHhhHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhHHhccCCHHHHHHHHHHHHH-HHHHHHH
Confidence            346788999999999999999999876543210   0000  00        00011122222    45543 4566677


Q ss_pred             HHHHHhhcchhhhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhcceeEEeecCCCCcccCHHHHHHHhcchhHH
Q 019052           79 NFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPAEREIESVIEVWNLATEPAFL  158 (347)
Q Consensus        79 ~~~aL~~ap~slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~liv~~~~~~~~~~t~~el~~~~~~~~fl  158 (347)
                      .+.++...|.+...-+..+..++..++++    |+.+  ++.+..+.++|+.++...+...+.. +.         ...+
T Consensus        88 ~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~--~~~~~~i~~~Gv~li~~~~~~~~~~-~~---------~G~l  151 (293)
T PRK10532         88 FYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPV--DFVWVVLAVLGLWFLLPLGQDVSHV-DL---------TGAA  151 (293)
T ss_pred             HHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChH--HHHHHHHHHHHHheeeecCCCcccC-Ch---------HHHH
Confidence            88899999999888777777788777763    5443  4566777888988765322211111 10         0110


Q ss_pred             HHHHHHHHHHHHHHHhh-ccccCcc-hhHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCcccchhHHHHH-HHHHHHHH
Q 019052          159 LYAALVITAVFILIFHY-IPQYGQT-HIMVYIGVCSLVGSLSVMSVKAIGIALKLTLSGMNQLIYPQTWAF-TLIVIVCV  235 (347)
Q Consensus       159 ~y~~~~~~~~~~l~~~~-~~r~g~~-~~l~y~~~~gllgg~t~l~~K~v~~~l~~~~~g~~~~~~~~~y~l-l~~~v~~~  235 (347)
                        + .....++...+.. .++..++ .+... ....++++.....   +.     ...+.....++..|.. +...+.+.
T Consensus       152 --l-~l~aa~~~a~~~v~~r~~~~~~~~~~~-~~~~~~~~~~l~~---~~-----~~~~~~~~~~~~~~~~~l~lgv~~t  219 (293)
T PRK10532        152 --L-ALGAGACWAIYILSGQRAGAEHGPATV-AIGSLIAALIFVP---IG-----ALQAGEALWHWSILPLGLAVAILST  219 (293)
T ss_pred             --H-HHHHHHHHHHHHHHHHHHhccCCchHH-HHHHHHHHHHHHH---HH-----HHccCcccCCHHHHHHHHHHHHHHH
Confidence              1 1111111111211 2222111 11111 1222222211110   01     0111112234455443 34456667


Q ss_pred             HHHHHHHHHhhcccCcceehhhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHhhhccCC
Q 019052          236 LTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKTK  306 (347)
Q Consensus       236 l~Q~~~ln~aL~~~da~~vvP~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~lG~~l~i~GVvlLs~~~  306 (347)
                      ..+....|.++++.+++.+.+.. ...|+++.+.|.++|||..+      ....+|.+++++|+...++.+
T Consensus       220 ~~~~~l~~~~~~~~~a~~as~~~-~l~Pv~a~l~~~l~lgE~~~------~~~~iG~~lIl~~~~~~~~~~  283 (293)
T PRK10532        220 ALPYSLEMIALTRLPTRTFGTLM-SMEPALAAVSGMIFLGETLT------LIQWLALGAIIAASMGSTLTI  283 (293)
T ss_pred             HHHHHHHHHHHHhcChhHHHHHH-HhHHHHHHHHHHHHhCCCCc------HHHHHHHHHHHHHHHHHHhcC
Confidence            77778889999999987666654 55799999999999999754      445577777778887776554

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.66  E-value=1.9e-06  Score=82.62  Aligned_cols=220  Identities=15%  Similarity=0.150  Sum_probs=122.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcchhhhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhcceeEEeecCCCCcccCH
Q 019052           66 WVGMITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPAEREIESV  145 (347)
Q Consensus        66 ~~G~~l~~~g~~~~~~aL~~ap~slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~liv~~~~~~~~~~t~  145 (347)
                      ..|+. ..+...++..++.+.+.+..+-+.++..+++++++++++|||++++++.|.+++++|+.+..   ..+.+ .+.
T Consensus        70 ~~g~~-~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~---~~~~~-~~~  144 (302)
T TIGR00817        70 PVAIV-HTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS---DTELS-FNW  144 (302)
T ss_pred             HHHHH-HHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc---CCccc-ccH
Confidence            44555 46777899999999999999999999999999999999999999999999999999997542   12211 111


Q ss_pred             HHHHHHhcchhHHHHHHHHHHHHHHHHH-hhccc------cCcchhHHHHHHHHHhhHHHH-HHHHHHHHHHHHHhcCCc
Q 019052          146 IEVWNLATEPAFLLYAALVITAVFILIF-HYIPQ------YGQTHIMVYIGVCSLVGSLSV-MSVKAIGIALKLTLSGMN  217 (347)
Q Consensus       146 ~el~~~~~~~~fl~y~~~~~~~~~~l~~-~~~~r------~g~~~~l~y~~~~gllgg~t~-l~~K~v~~~l~~~~~g~~  217 (347)
                               .+.+  +. ....++...+ ...+|      .+......|....+.+.-.-. ...........+......
T Consensus       145 ---------~G~~--~~-l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~  212 (302)
T TIGR00817       145 ---------AGFL--SA-MISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAIS  212 (302)
T ss_pred             ---------HHHH--HH-HHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhc
Confidence                     1111  01 1111111111 11222      122223344333222111110 000000000000000000


Q ss_pred             ccchhHHHHHH-HHHHHHHHHHHHHHHHhhcccCcceehhhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHH
Q 019052          218 QLIYPQTWAFT-LIVIVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTIL  296 (347)
Q Consensus       218 ~~~~~~~y~ll-~~~v~~~l~Q~~~ln~aL~~~da~~vvP~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~lG~~l~i  296 (347)
                      .......|... .....+........+.++++.+++...- +....++++++.|.+++||...      ....+|.++++
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv-~~~l~pv~~~~~~~~~lge~lt------~~~~~G~~lil  285 (302)
T TIGR00817       213 GVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSV-GNCMKRVVVIVVSILFFGTKIS------PQQVFGTGIAI  285 (302)
T ss_pred             ccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHH-HhhhhhhheeeeehhhcCCCCc------hhHHHHHHHHH
Confidence            00111123212 2222222222233346888888764444 3677889999999999999654      34557888899


Q ss_pred             HHHhhhccCCCCC
Q 019052          297 AGTFLLHKTKDLG  309 (347)
Q Consensus       297 ~GVvlLs~~~~~~  309 (347)
                      .|+.+-++.|.++
T Consensus       286 ~Gv~l~~~~k~~~  298 (302)
T TIGR00817       286 AGVFLYSRVKAQK  298 (302)
T ss_pred             HHHHHHHHHhccC
Confidence            9999988766544

specificities overlap.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=98.47  E-value=0.00014  Score=70.19  Aligned_cols=228  Identities=18%  Similarity=0.231  Sum_probs=131.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhcchhhhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhcceeEEeecCCCCccc
Q 019052           64 LWWVGMITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPAEREIE  143 (347)
Q Consensus        64 ~W~~G~~l~~~g~~~~~~aL~~ap~slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~liv~~~~~~~~~~  143 (347)
                      .+..+ .++.++..++-.||.+.|...-+-+-+..++++++++.+++|+|.+++|+.+++++++|+++......++.+..
T Consensus        67 ~~~~~-~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~  145 (303)
T PF08449_consen   67 YAILS-FLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSS  145 (303)
T ss_pred             HHHHH-HHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccccc
Confidence            34444 55567888888999999999999999999999999999999999999999999999999999887765444322


Q ss_pred             CHHHHHHHhcchhHHHHHHHHHHHHHH-HHH--hhccccCc--chhHHHHHHHHHhh-HHHHHHHHHHHHHHHHHhcCCc
Q 019052          144 SVIEVWNLATEPAFLLYAALVITAVFI-LIF--HYIPQYGQ--THIMVYIGVCSLVG-SLSVMSVKAIGIALKLTLSGMN  217 (347)
Q Consensus       144 t~~el~~~~~~~~fl~y~~~~~~~~~~-l~~--~~~~r~g~--~~~l~y~~~~gllg-g~t~l~~K~v~~~l~~~~~g~~  217 (347)
                      +.++...   .-+....+. ..+.-.. -.+  +..++++.  ...+.|-..-++.. .......+ ..+ .....  ..
T Consensus       146 ~~~~~~~---~~G~~ll~~-sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~-~~~-~~~~~--~f  217 (303)
T PF08449_consen  146 NSSSFSS---ALGIILLLL-SLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLP-TGE-FRSAI--RF  217 (303)
T ss_pred             ccccccc---hhHHHHHHH-HHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHH-hhH-hhHHH--HH
Confidence            2110000   001111000 0000000 001  11123322  22344544444322 22211111 111 11000  11


Q ss_pred             ccchhHHHHHHHHHHH-HHHHHHHHHHHhhcccCcceehhhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHH
Q 019052          218 QLIYPQTWAFTLIVIV-CVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTIL  296 (347)
Q Consensus       218 ~~~~~~~y~ll~~~v~-~~l~Q~~~ln~aL~~~da~~vvP~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~lG~~l~i  296 (347)
                      ...||..+..++.... .++.|. +.+.-.+++++... -+....--..+++.++++|++.  .++.++    .|.++++
T Consensus       218 ~~~~p~~~~~l~~~s~~~~~g~~-~i~~~~~~~~al~~-t~v~t~Rk~~sillS~~~f~~~--~~~~~~----~G~~lv~  289 (303)
T PF08449_consen  218 ISAHPSVLLYLLLFSLTGALGQF-FIFYLIKKFSALTT-TIVTTLRKFLSILLSVIIFGHP--LSPLQW----IGIVLVF  289 (303)
T ss_pred             HHHhHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCchhh-hhHHHHHHHHHHHHHHHhcCCc--CChHHH----HHHHHhH
Confidence            2467777666555544 455554 44556777776533 3444455778899999999974  455555    5566677


Q ss_pred             HHHhhhccCCCC
Q 019052          297 AGTFLLHKTKDL  308 (347)
Q Consensus       297 ~GVvlLs~~~~~  308 (347)
                      .|+.+=+..+.+
T Consensus       290 ~g~~~~~~~~~k  301 (303)
T PF08449_consen  290 AGIFLYSYAKKK  301 (303)
T ss_pred             HHHHHHHHhhcc
Confidence            777765554443

; GO: 0055085 transmembrane transport

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.44  E-value=7.2e-07  Score=73.75  Aligned_cols=67  Identities=30%  Similarity=0.435  Sum_probs=60.1

Q ss_pred             HHHHHHHHHHHHHHHHhhcchhhhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhcceeEEee
Q 019052           68 GMITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLH  135 (347)
Q Consensus        68 G~~l~~~g~~~~~~aL~~ap~slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~liv~~  135 (347)
                      |......+..+...|+.++| ..+.++.+++.+++.+++.+++|||+++++|.|++++.+|++++...
T Consensus        41 g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~  107 (113)
T PF13536_consen   41 GLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWS  107 (113)
T ss_pred             HHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhh
Confidence            44445578899999999999 68999999999999999999999999999999999999999977553

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.42  E-value=3.7e-05  Score=75.90  Aligned_cols=59  Identities=15%  Similarity=0.215  Sum_probs=54.9

Q ss_pred             HHHHHHHHHhhcchhhhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhcceeEE
Q 019052           75 GEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIV  133 (347)
Q Consensus        75 g~~~~~~aL~~ap~slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~liv  133 (347)
                      +..+...++++.+.+..+=+-+++.+++++++++++|||++++++.|++++++|+.+..
T Consensus       127 ~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~  185 (350)
T PTZ00343        127 VHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALAS  185 (350)
T ss_pred             HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhee
Confidence            45556689999999999999999999999999999999999999999999999999875

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.35  E-value=4.1e-05  Score=72.98  Aligned_cols=214  Identities=13%  Similarity=0.242  Sum_probs=127.2

Q ss_pred             hhHHHHHHH---HHHHHHHHHHHHhhcchhhhhcch-hHHHHHHHHHHHHHhccccccchhh----HHHHHhhcceeEEe
Q 019052           63 PLWWVGMIT---MVVGEIANFAAYAFAPAILVTPLG-ALSIIISAALAHIILRERLHIFGIL----GCILCVVGSTTIVL  134 (347)
Q Consensus        63 p~W~~G~~l---~~~g~~~~~~aL~~ap~slv~Pl~-~~~lv~~~~la~~~l~E~~~~~~~~----G~~li~~G~~liv~  134 (347)
                      ..|+.+++.   -.+|+++|+.++....+|...|+. +.+++.|.+.+.+++||--+..+++    +.+++++|+.+...
T Consensus        43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~  122 (269)
T PF06800_consen   43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY  122 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence            456666654   468999999999999999999998 8999999999999999988877754    78899999987766


Q ss_pred             ecCCCCcccCHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhccccCcchhHH--HHHHHH-HhhHHHHHHHHHHHHHHHH
Q 019052          135 HAPAEREIESVIEVWNLATEPAFLLYAALVITAVFILIFHYIPQYGQTHIMV--YIGVCS-LVGSLSVMSVKAIGIALKL  211 (347)
Q Consensus       135 ~~~~~~~~~t~~el~~~~~~~~fl~y~~~~~~~~~~l~~~~~~r~g~~~~l~--y~~~~g-llgg~t~l~~K~v~~~l~~  211 (347)
                      ...++++..+..+..+     ..+ ..  +..-+....|...+|..+.++.-  +--.-| +++++--..          
T Consensus       123 ~~~~~~~~~~~~~~~k-----gi~-~L--l~stigy~~Y~~~~~~~~~~~~~~~lPqaiGm~i~a~i~~~----------  184 (269)
T PF06800_consen  123 QDKKSDKSSSKSNMKK-----GIL-AL--LISTIGYWIYSVIPKAFHVSGWSAFLPQAIGMLIGAFIFNL----------  184 (269)
T ss_pred             ccccccccccccchhh-----HHH-HH--HHHHHHHHHHHHHHHhcCCChhHhHHHHHHHHHHHHHHHhh----------
Confidence            5544443222222221     111 11  11112223344455653332211  111111 222221111          


Q ss_pred             HhcCCcccchhHHHHHHHHHHHHHHHHH-HHHHHhhcccCcceehhhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHH
Q 019052          212 TLSGMNQLIYPQTWAFTLIVIVCVLTQM-NYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMC  290 (347)
Q Consensus       212 ~~~g~~~~~~~~~y~ll~~~v~~~l~Q~-~~ln~aL~~~da~~vvP~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~l  290 (347)
                       +. .+.+.+...|.=++..+.-.+.-+ +++...  .--...-+|+-|.. .+.+.++|+.+|+|.+  +..++....+
T Consensus       185 -~~-~~~~~~k~~~~nil~G~~w~ignl~~~is~~--~~G~a~af~lSQ~~-vvIStlgGI~il~E~K--t~ke~~~~~~  257 (269)
T PF06800_consen  185 -FS-KKPFFEKKSWKNILTGLIWGIGNLFYLISAQ--KNGVATAFTLSQLG-VVISTLGGIFILKEKK--TKKEMIYTLI  257 (269)
T ss_pred             -cc-cccccccchHHhhHHHHHHHHHHHHHHHhHH--hccchhhhhHHhHH-HHHHHhhhheEEEecC--chhhHHHHHH
Confidence             01 122333333332222222111111 222221  22234567787777 7788999999999987  5778899999


Q ss_pred             HHHHHHHHHhh
Q 019052          291 GFVTILAGTFL  301 (347)
Q Consensus       291 G~~l~i~GVvl  301 (347)
                      |+++++.|.++
T Consensus       258 G~~Liv~G~il  268 (269)
T PF06800_consen  258 GLILIVIGAIL  268 (269)
T ss_pred             HHHHHHHhhhc
Confidence            99999998875

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=98.21  E-value=1.3e-05  Score=67.68  Aligned_cols=98  Identities=12%  Similarity=0.024  Sum_probs=78.5

Q ss_pred             HHHHHHHHHHHHHhHhhhhhhccCCcccCCcccccccchhHHHHHHHHHHHHHHHHHHHhhcchhhhhcc-hhHHHHHHH
Q 019052           25 LSSSIFIGSSFIVKKKGLKKAGASGVRAGFGGYSYLYEPLWWVGMITMVVGEIANFAAYAFAPAILVTPL-GALSIIISA  103 (347)
Q Consensus        25 l~sa~~~a~G~~lqk~~~~~~~~~~~~~~~~~~~~l~~p~W~~G~~l~~~g~~~~~~aL~~ap~slv~Pl-~~~~lv~~~  103 (347)
                      +++.++--.|....|++....               +...|+..+.++++++.+...++...|+++.+|+ .+++.+.+.
T Consensus         8 ~~Ai~~Ev~~t~~LK~s~g~~---------------~~~~~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~   72 (120)
T PRK10452          8 ALAIATEITGTLSMKWASVSE---------------GNGGFILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFIT   72 (120)
T ss_pred             HHHHHHHHHHHHHHHhhccCC---------------CcHHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHH
Confidence            344566667777777652110               1233567777788999999999999999999999 479999999


Q ss_pred             HHHHHHhccccccchhhHHHHHhhcceeEEeecC
Q 019052          104 ALAHIILRERLHIFGILGCILCVVGSTTIVLHAP  137 (347)
Q Consensus       104 ~la~~~l~E~~~~~~~~G~~li~~G~~liv~~~~  137 (347)
                      +.+.+++||+++..+++|+.+++.|++.+-..++
T Consensus        73 ~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~  106 (120)
T PRK10452         73 LFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTR  106 (120)
T ss_pred             HHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCC
Confidence            9999999999999999999999999988755443

>TIGR00688 rarD rarD protein

Probab=98.16  E-value=0.0001  Score=69.01  Aligned_cols=62  Identities=16%  Similarity=0.208  Sum_probs=57.5

Q ss_pred             HHHHHHHHHHHHhhcchhhhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhcceeEE
Q 019052           72 MVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIV  133 (347)
Q Consensus        72 ~~~g~~~~~~aL~~ap~slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~liv  133 (347)
                      ...+..+.+.++...|.+...-+..+..+|+++++++++|||+++++|.|+.+..+|++++.
T Consensus        80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence            55677899999999999999999999999999999999999999999999999999998654

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=98.10  E-value=2.9e-05  Score=64.54  Aligned_cols=96  Identities=15%  Similarity=0.087  Sum_probs=76.9

Q ss_pred             HHHHHHHHHHHHHhHhhhhhhccCCcccCCcccccccchhH-HHHHHHHHHHHHHHHHHHhhcchhhhhcc-hhHHHHHH
Q 019052           25 LSSSIFIGSSFIVKKKGLKKAGASGVRAGFGGYSYLYEPLW-WVGMITMVVGEIANFAAYAFAPAILVTPL-GALSIIIS  102 (347)
Q Consensus        25 l~sa~~~a~G~~lqk~~~~~~~~~~~~~~~~~~~~l~~p~W-~~G~~l~~~g~~~~~~aL~~ap~slv~Pl-~~~~lv~~  102 (347)
                      +++.++-..|....|++.                -++++.| +..+.++++++.+...|+...|+++..|+ .+++.+.+
T Consensus         8 ~~a~~~Ev~~~~~lK~s~----------------gf~~~~~~i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~   71 (110)
T PRK09541          8 GGAILAEVIGTTLMKFSE----------------GFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLI   71 (110)
T ss_pred             HHHHHHHHHHHHHHHHhc----------------CCCchhHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHH
Confidence            344566677777777651                1234444 44556678888889999999999999999 67999999


Q ss_pred             HHHHHHHhccccccchhhHHHHHhhcceeEEeec
Q 019052          103 AALAHIILRERLHIFGILGCILCVVGSTTIVLHA  136 (347)
Q Consensus       103 ~~la~~~l~E~~~~~~~~G~~li~~G~~liv~~~  136 (347)
                      .+.+.+++||+++..+++|..+++.|++++-..+
T Consensus        72 ~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         72 SLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            9999999999999999999999999999874443

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.03  E-value=1.9e-05  Score=75.77  Aligned_cols=124  Identities=16%  Similarity=0.114  Sum_probs=93.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhHhhhhhhccCCc-c--c-CC---------cccccccch-----hHHHHHHHHHHHHHHH
Q 019052           18 IKGLILALSSSIFIGSSFIVKKKGLKKAGASGV-R--A-GF---------GGYSYLYEP-----LWWVGMITMVVGEIAN   79 (347)
Q Consensus        18 ~iGv~lal~sa~~~a~G~~lqk~~~~~~~~~~~-~--~-~~---------~~~~~l~~p-----~W~~G~~l~~~g~~~~   79 (347)
                      ..|.+++++++++.+...++.||..++.+.... .  . +.         .......++     .++.|++..++++.++
T Consensus       147 ~~G~ll~l~aa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~lgv~~t~~~~~l~  226 (293)
T PRK10532        147 LTGAALALGAGACWAIYILSGQRAGAEHGPATVAIGSLIAALIFVPIGALQAGEALWHWSILPLGLAVAILSTALPYSLE  226 (293)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHccCcccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            579999999999999999998886543221000 0  0 00         000011121     2466677778888999


Q ss_pred             HHHHhhcchhhhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhcceeEEeecCCCCc
Q 019052           80 FAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPAERE  141 (347)
Q Consensus        80 ~~aL~~ap~slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~liv~~~~~~~~  141 (347)
                      ..++...|.+.+.++..+..+++.+++.+++||+++..+++|.+++++|+.......+++++
T Consensus       227 ~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~~~~  288 (293)
T PRK10532        227 MIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRREPK  288 (293)
T ss_pred             HHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence            99999999999999999999999999999999999999999999999999877555444433

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=98.01  E-value=0.00024  Score=66.86  Aligned_cols=70  Identities=19%  Similarity=0.274  Sum_probs=64.7

Q ss_pred             HHHHHHHHHHHHHHHhhcchhhhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhcceeEEeecCC
Q 019052           69 MITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPA  138 (347)
Q Consensus        69 ~~l~~~g~~~~~~aL~~ap~slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~liv~~~~~  138 (347)
                      -++|.+.+.+.++++...+.+.-|-+...-++++++++.++||+|+++++|++..+.++|++++-.....
T Consensus        24 A~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~   93 (244)
T PF04142_consen   24 ALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ   93 (244)
T ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence            3678999999999999999999999999999999999999999999999999999999999988665443

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=97.97  E-value=2.2e-05  Score=74.26  Aligned_cols=282  Identities=20%  Similarity=0.250  Sum_probs=157.8

Q ss_pred             CCCCCCccccCCch----hhHHHHHHHHHHHHHHHHHHHHhHhhhhhhccC--Cccc-CCcc-----cccccch------
Q 019052            2 ADPNGHSWRDGMSS----DNIKGLILALSSSIFIGSSFIVKKKGLKKAGAS--GVRA-GFGG-----YSYLYEP------   63 (347)
Q Consensus         2 ~~~~~~~~~~~~~s----~~~iGv~lal~sa~~~a~G~~lqk~~~~~~~~~--~~~~-~~~~-----~~~l~~p------   63 (347)
                      +|||+.-||...+.    ...+|+.+.-+| ++.+...++-++...-.++.  ..|. +...     .-|.+.|      
T Consensus        17 ~d~~~r~~e~~~qri~~d~p~~gl~l~~vs-~ff~~~~vv~t~~~e~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g   95 (346)
T KOG4510|consen   17 PDPAPRWLERTLQRISKDKPNLGLLLLTVS-YFFNSCMVVSTKVLENDPMELASFRLLVRMLITYPCLIYYMQPVIGPEG   95 (346)
T ss_pred             cCCCccHHHHHhhHhhcCCCccCceehhhH-HHHhhHHHhhhhhhccChhHhhhhhhhhehhhhheEEEEEeeeeecCCC
Confidence            58888877732221    456799999998 88888888888765543322  1110 0000     0111111      


Q ss_pred             --hH--HHHHHHHHHHHHHHHHHHhhcchhhhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhcceeEEe----e
Q 019052           64 --LW--WVGMITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVL----H  135 (347)
Q Consensus        64 --~W--~~G~~l~~~g~~~~~~aL~~ap~slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~liv~----~  135 (347)
                        .|  +-|+.-+ .|..+...||...|++=..-+.-.+.+|+.++++.+||||.|+.|.+|..+...|+++++-    |
T Consensus        96 ~R~~LiLRg~mG~-tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlF  174 (346)
T KOG4510|consen   96 KRKWLILRGFMGF-TGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLF  174 (346)
T ss_pred             cEEEEEeehhhhh-hHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCccc
Confidence              11  2233222 4557778888888888777788889999999999999999999999999999999998853    3


Q ss_pred             cCCCCcccCHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhccccCcc-h---hHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q 019052          136 APAEREIESVIEVWNLATEPAFLLYAALVITAVFILIFHYIPQYGQT-H---IMVYIGVCSLVGSLSVMSVKAIGIALKL  211 (347)
Q Consensus       136 ~~~~~~~~t~~el~~~~~~~~fl~y~~~~~~~~~~l~~~~~~r~g~~-~---~l~y~~~~gllgg~t~l~~K~v~~~l~~  211 (347)
                      +.+.....+. +  .-+..|...+  .+..++.....|.+.+..|++ |   .+-|.+.-++..++-.+.          
T Consensus       175 G~~t~g~~~s-~--~~~~~~gt~a--ai~s~lf~asvyIilR~iGk~~h~~msvsyf~~i~lV~s~I~~~----------  239 (346)
T KOG4510|consen  175 GDTTEGEDSS-Q--VEYDIPGTVA--AISSVLFGASVYIILRYIGKNAHAIMSVSYFSLITLVVSLIGCA----------  239 (346)
T ss_pred             CCCccccccc-c--ccccCCchHH--HHHhHhhhhhHHHHHHHhhccccEEEEehHHHHHHHHHHHHHHh----------
Confidence            3322211111 1  1122344221  111111111112222222332 2   223333222221111110          


Q ss_pred             HhcCCccc-chhHHHH-HHHHHHHHHHHHHHHHHHhhcccCcceehhhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHH
Q 019052          212 TLSGMNQL-IYPQTWA-FTLIVIVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEM  289 (347)
Q Consensus       212 ~~~g~~~~-~~~~~y~-ll~~~v~~~l~Q~~~ln~aL~~~da~~vvP~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~  289 (347)
                      ++ |.-|+ +.+.=|. ++...+.+.+.|+ ++.+++|+-.+-- +.++.+...+++++--+++|+|+-.  .    +-.
T Consensus       240 ~i-g~~~lP~cgkdr~l~~~lGvfgfigQI-llTm~lQiErAGp-vaim~~~dvvfAf~wqv~ff~~~Pt--~----ws~  310 (346)
T KOG4510|consen  240 SI-GAVQLPHCGKDRWLFVNLGVFGFIGQI-LLTMGLQIERAGP-VAIMTYTDVVFAFFWQVLFFGHWPT--I----WSW  310 (346)
T ss_pred             hc-cceecCccccceEEEEEehhhhhHHHH-HHHHHhhhhccCC-eehhhHHHHHHHHHHHHHHhcCCCh--H----HHh
Confidence            11 21122 2233333 3344566666664 7899999766543 3466777888999999999999753  3    344


Q ss_pred             HHHHHHHHHHhhhccCCCCC
Q 019052          290 CGFVTILAGTFLLHKTKDLG  309 (347)
Q Consensus       290 lG~~l~i~GVvlLs~~~~~~  309 (347)
                      +|.+.++..++..+++|-..
T Consensus       311 ~Ga~~vvsS~v~~a~~kwa~  330 (346)
T KOG4510|consen  311 VGAVMVVSSTVWVALKKWAG  330 (346)
T ss_pred             hceeeeehhHHHHHHHHHhc
Confidence            56666666666666666554

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.95  E-value=0.00043  Score=68.30  Aligned_cols=289  Identities=13%  Similarity=0.091  Sum_probs=146.9

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhHhhhhhhccC-----C-------c-----ccCCccccccc---chhHHHHHHH--
Q 019052           14 SSDNIKGLILALSSSIFIGSSFIVKKKGLKKAGAS-----G-------V-----RAGFGGYSYLY---EPLWWVGMIT--   71 (347)
Q Consensus        14 ~s~~~iGv~lal~sa~~~a~G~~lqk~~~~~~~~~-----~-------~-----~~~~~~~~~l~---~p~W~~G~~l--   71 (347)
                      .++..+|++..+++.++.+.=.+-|||...-.-|.     +       +     -......++++   ...|..+++.  
T Consensus         2 ~~~~~~G~~~~~i~~~~~GS~~~p~K~~k~w~wE~~W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G~   81 (345)
T PRK13499          2 SNAIILGIIWHLIGGASSGSFYAPFKKVKKWSWETMWSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFGA   81 (345)
T ss_pred             CchhHHHHHHHHHHHHHhhcccccccccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHHH
Confidence            34556677777777777666666666621111000     0       0     00001112222   3455555533  


Q ss_pred             -HHHHHHHHHHHHhhcchhhhhcch-hHHHHHHHHHHHHHhcccc---ccc----hhhHHHHHhhcceeEEeecCCCCcc
Q 019052           72 -MVVGEIANFAAYAFAPAILVTPLG-ALSIIISAALAHIILRERL---HIF----GILGCILCVVGSTTIVLHAPAEREI  142 (347)
Q Consensus        72 -~~~g~~~~~~aL~~ap~slv~Pl~-~~~lv~~~~la~~~l~E~~---~~~----~~~G~~li~~G~~liv~~~~~~~~~  142 (347)
                       -.+|++.++.+..+..+|+-.|+. +++++++.++..++++|=-   +..    ..+|++++++|+++....+...++.
T Consensus        82 ~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~~~  161 (345)
T PRK13499         82 LWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKERK  161 (345)
T ss_pred             HHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhcccc
Confidence             468999999999999999999996 6788999999999998633   333    3569999999999886644332222


Q ss_pred             cCHHHHHHHhcchhHHHHHHHHHHHHHHHHHhh-------ccc----cCcchh-HHHHHHHH-HhhHHHHHHHHHHHHHH
Q 019052          143 ESVIEVWNLATEPAFLLYAALVITAVFILIFHY-------IPQ----YGQTHI-MVYIGVCS-LVGSLSVMSVKAIGIAL  209 (347)
Q Consensus       143 ~t~~el~~~~~~~~fl~y~~~~~~~~~~l~~~~-------~~r----~g~~~~-l~y~~~~g-llgg~t~l~~K~v~~~l  209 (347)
                      .+.||-.+.-..... +.+.+..+....  |.+       .++    .|.... ......++ ++|++..-+.=+.-.+-
T Consensus       162 ~~~~~~~~~~~~KGi-~ialisgi~~~~--f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~  238 (345)
T PRK13499        162 MGIKKAEEFNLKKGL-ILAVMSGIFSAC--FSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLA  238 (345)
T ss_pred             cccccccccchHhHH-HHHHHHHHHHHH--HHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            111100000001122 122222221111  110       011    122111 11112222 23443211100000000


Q ss_pred             H-HHhcCCcccch-----hHHHHHHHHHHHHHHHHHHHHHHhhccc-C--cceehhhHHHHHHHHHHHHHHHHhcccCCC
Q 019052          210 K-LTLSGMNQLIY-----PQTWAFTLIVIVCVLTQMNYLNMALDTF-N--TAVVSPIYYVMFTSLTILASVIMFKDWDRQ  280 (347)
Q Consensus       210 ~-~~~~g~~~~~~-----~~~y~ll~~~v~~~l~Q~~~ln~aL~~~-d--a~~vvP~~~v~~~~~~i~~G~i~f~E~~~~  280 (347)
                      + ...+....+..     +..|++....-+.=..|..+.-.+-+.- +  +....++-+-...+++.+.|+ +++|++..
T Consensus       239 k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a  317 (345)
T PRK13499        239 KNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGA  317 (345)
T ss_pred             hCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCC
Confidence            1 00000111222     3444444443333445543332222211 1  222344555555678888888 59999998


Q ss_pred             ChHHHHHHHHHHHHHHHHHhhhccCC
Q 019052          281 NPTQIVTEMCGFVTILAGTFLLHKTK  306 (347)
Q Consensus       281 ~~~~~~~~~lG~~l~i~GVvlLs~~~  306 (347)
                      +..+.....+|+++++.|.+++....
T Consensus       318 ~~k~~~~l~~G~vliI~g~~lig~~~  343 (345)
T PRK13499        318 SRRPVRVLSLGCVVIILAANIVGLGN  343 (345)
T ss_pred             CccchhHHHHHHHHHHHHHHHHhhcc
Confidence            89999999999999999999987543

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.85  E-value=0.0001  Score=59.18  Aligned_cols=85  Identities=15%  Similarity=0.009  Sum_probs=46.4

Q ss_pred             HHHHHHHHHHHHHhHhhhhhhccCCcccCCcccccccchhHHHHHH-HHHHHHHHHHHHHhhcchhhhhcch-hHHHHHH
Q 019052           25 LSSSIFIGSSFIVKKKGLKKAGASGVRAGFGGYSYLYEPLWWVGMI-TMVVGEIANFAAYAFAPAILVTPLG-ALSIIIS  102 (347)
Q Consensus        25 l~sa~~~a~G~~lqk~~~~~~~~~~~~~~~~~~~~l~~p~W~~G~~-l~~~g~~~~~~aL~~ap~slv~Pl~-~~~lv~~  102 (347)
                      +++.++...++...|++.                -++++.|..+.+ ++.++..+...|+...|+++..|+- +++.+..
T Consensus         7 ~~a~~~ev~~~~~lK~s~----------------g~~~~~~~~~~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~   70 (93)
T PF00893_consen    7 LLAILFEVVGTIALKASH----------------GFTQLIPTILAVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGV   70 (93)
T ss_dssp             HHHHHHHHHHHHH------------------------------HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHH----------------hhcchhhHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHH
Confidence            445567777888888732                223444555554 5788889999999999999999975 6999999


Q ss_pred             HHHHHHHhccccccchhhHHHHH
Q 019052          103 AALAHIILRERLHIFGILGCILC  125 (347)
Q Consensus       103 ~~la~~~l~E~~~~~~~~G~~li  125 (347)
                      .+.+.+++||+++..++.|+.+|
T Consensus        71 ~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   71 TLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHhCCCCCHHHHhheeeC
Confidence            99999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.81  E-value=0.00025  Score=58.86  Aligned_cols=98  Identities=15%  Similarity=0.059  Sum_probs=75.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHhHhhhhhhccCCcccCCcccccccchhHHHHHHH-HHHHHHHHHHHHhhcchhhhhcch-h
Q 019052           19 KGLILALSSSIFIGSSFIVKKKGLKKAGASGVRAGFGGYSYLYEPLWWVGMIT-MVVGEIANFAAYAFAPAILVTPLG-A   96 (347)
Q Consensus        19 iGv~lal~sa~~~a~G~~lqk~~~~~~~~~~~~~~~~~~~~l~~p~W~~G~~l-~~~g~~~~~~aL~~ap~slv~Pl~-~   96 (347)
                      .....-+++.++--.|....|++.                -+++|.|...+.. +++++.+-..|+...|+++..++- +
T Consensus         7 ~~~~~L~~Ai~~Ev~~t~~Lk~s~----------------gf~~~~~~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~G   70 (109)
T PRK10650          7 IHAAWLALAIVLEIVANIFLKFSD----------------GFRRKIYGILSLAAVLAAFSALSQAVKGIDLSVAYALWGG   70 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhc----------------CCcchHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHH
Confidence            333444555666777777777641                2345666555544 567777888889999999999975 4


Q ss_pred             HHHHHHHHHHHHHhccccccchhhHHHHHhhcceeE
Q 019052           97 LSIIISAALAHIILRERLHIFGILGCILCVVGSTTI  132 (347)
Q Consensus        97 ~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~li  132 (347)
                      ++.+.+.+.+.+++||+++..++.|+.+++.|++.+
T Consensus        71 iG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         71 FGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            899999999999999999999999999999998864

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=97.78  E-value=0.0002  Score=66.54  Aligned_cols=113  Identities=20%  Similarity=0.274  Sum_probs=85.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhHhhhhhhccCC--cc----c-----------CCcccccccchhH----HHHHHHHHHH
Q 019052           17 NIKGLILALSSSIFIGSSFIVKKKGLKKAGASG--VR----A-----------GFGGYSYLYEPLW----WVGMITMVVG   75 (347)
Q Consensus        17 ~~iGv~lal~sa~~~a~G~~lqk~~~~~~~~~~--~~----~-----------~~~~~~~l~~p~W----~~G~~l~~~g   75 (347)
                      ...|..++++++++.+....+.|+...+.+...  ..    .           ..+.........|    +.|.+..+++
T Consensus       126 ~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (260)
T TIGR00950       126 NPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQALSLQWGALLYLGLIGTALA  205 (260)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHH
Confidence            467999999999999999999999765432100  00    0           0000011112223    2344445678


Q ss_pred             HHHHHHHHhhcchhhhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhcc
Q 019052           76 EIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGS  129 (347)
Q Consensus        76 ~~~~~~aL~~ap~slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~  129 (347)
                      ..+++.++...|.+.+..+..+..+++.+++.+++||+++..++.|+.+++.|+
T Consensus       206 ~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       206 YFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            899999999999999999999999999999999999999999999999999986

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=97.73  E-value=0.00013  Score=72.44  Aligned_cols=124  Identities=19%  Similarity=0.238  Sum_probs=88.3

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhHhhhhhhccCCc---c----------------cCCcccccc--cchhHHHHHHH--
Q 019052           15 SDNIKGLILALSSSIFIGSSFIVKKKGLKKAGASGV---R----------------AGFGGYSYL--YEPLWWVGMIT--   71 (347)
Q Consensus        15 s~~~iGv~lal~sa~~~a~G~~lqk~~~~~~~~~~~---~----------------~~~~~~~~l--~~p~W~~G~~l--   71 (347)
                      .++.+|.++++.++++.++..++||+..++-+....   .                .+.......  .+. +...++.  
T Consensus       185 ~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~i~y~~  263 (358)
T PLN00411        185 SDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDI-TLITIVTMA  263 (358)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccch-HHHHHHHHH
Confidence            356789999999999999999999986554321100   0                000000000  011 1112221  


Q ss_pred             --HHHHHHHHHHHHhhcchhhhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhcceeEEeecCCC
Q 019052           72 --MVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPAE  139 (347)
Q Consensus        72 --~~~g~~~~~~aL~~ap~slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~liv~~~~~~  139 (347)
                        ..+++.+|..++...+.+.+..+.-+..+++++++..+++|+++..+++|.++|+.|+.+......+|
T Consensus       264 i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~~~  333 (358)
T PLN00411        264 IITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKANE  333 (358)
T ss_pred             HHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhhhh
Confidence              23467788889999999999999999999999999999999999999999999999998775443333

>PRK11689 aromatic amino acid exporter; Provisional

Probab=97.60  E-value=0.00032  Score=67.28  Aligned_cols=114  Identities=16%  Similarity=0.071  Sum_probs=84.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhHhhhhhhccCCccc--C----------Ccccccccch-hH----HHHHHHHHHHHHHHH
Q 019052           18 IKGLILALSSSIFIGSSFIVKKKGLKKAGASGVRA--G----------FGGYSYLYEP-LW----WVGMITMVVGEIANF   80 (347)
Q Consensus        18 ~iGv~lal~sa~~~a~G~~lqk~~~~~~~~~~~~~--~----------~~~~~~l~~p-~W----~~G~~l~~~g~~~~~   80 (347)
                      ..|..++++++++.|.+.++.||-.++.+......  +          .+....-.++ .|    +.| +..++++.++.
T Consensus       155 ~~G~~~~l~aa~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~-~~t~~~~~l~~  233 (295)
T PRK11689        155 PLSYGLAFIGAFIWAAYCNVTRKYARGKNGITLFFILTALALWIKYFLSPQPAMVFSLPAIIKLLLAA-AAMGFGYAAWN  233 (295)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHhcCccccCCHHHHHHHHHHH-HHHHHHHHHHH
Confidence            46999999999999999999999643321100000  0          0000001112 22    122 22456788899


Q ss_pred             HHHhhcchhhhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhcceeE
Q 019052           81 AAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTI  132 (347)
Q Consensus        81 ~aL~~ap~slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~li  132 (347)
                      .++...|.+.+.++..+..+++.+++.+++||+++..+++|.++|+.|+.+.
T Consensus       234 ~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~  285 (295)
T PRK11689        234 VGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLC  285 (295)
T ss_pred             HHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHH
Confidence            9999999999999999999999999999999999999999999999998765

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=97.60  E-value=0.00016  Score=68.75  Aligned_cols=113  Identities=19%  Similarity=0.145  Sum_probs=81.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHhHhhhhhhccCC-c-c--c-----C-C---------ccccc-ccchhH----HHHHHHHHH
Q 019052           19 KGLILALSSSIFIGSSFIVKKKGLKKAGASG-V-R--A-----G-F---------GGYSY-LYEPLW----WVGMITMVV   74 (347)
Q Consensus        19 iGv~lal~sa~~~a~G~~lqk~~~~~~~~~~-~-~--~-----~-~---------~~~~~-l~~p~W----~~G~~l~~~   74 (347)
                      .|+.++++++++.+.+.++.|+...+.+... . .  .     + .         +.... ...+.|    +.+.+..++
T Consensus       144 ~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l  223 (281)
T TIGR03340       144 KAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSMFPYARQILPSATLGGLMIGG  223 (281)
T ss_pred             hHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHHH
Confidence            5777899999999999998887543221110 0 0  0     0 0         00000 011112    233344567


Q ss_pred             HHHHHHHHHhhcchhhhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhccee
Q 019052           75 GEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTT  131 (347)
Q Consensus        75 g~~~~~~aL~~ap~slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~l  131 (347)
                      ++.+++.++...|.+.+.++.-++.+++.+++.+++||+++..+++|.+++++|+.+
T Consensus       224 ~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       224 AYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            888999999999999999999999999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=97.59  E-value=5.8e-05  Score=61.41  Aligned_cols=68  Identities=28%  Similarity=0.430  Sum_probs=61.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcchhhhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhcceeE
Q 019052           65 WWVGMITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTI  132 (347)
Q Consensus        65 W~~G~~l~~~g~~~~~~aL~~ap~slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~li  132 (347)
                      ...|.+...++..+...++...|.+.++++..++.+++.+++..++||+++++++.|+.+++.|++++
T Consensus        57 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~  124 (126)
T PF00892_consen   57 LFLGLLGTALAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI  124 (126)
T ss_pred             hHhhccceehHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence            34555556788899999999999999999999999999999999999999999999999999998754

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=97.57  E-value=0.00042  Score=66.33  Aligned_cols=116  Identities=14%  Similarity=0.045  Sum_probs=85.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhHhhhhhhccCC-cc--------------cCCcccccccc-hhH----HHHHHHHHHHH
Q 019052           17 NIKGLILALSSSIFIGSSFIVKKKGLKKAGASG-VR--------------AGFGGYSYLYE-PLW----WVGMITMVVGE   76 (347)
Q Consensus        17 ~~iGv~lal~sa~~~a~G~~lqk~~~~~~~~~~-~~--------------~~~~~~~~l~~-p~W----~~G~~l~~~g~   76 (347)
                      ...|..+++++++++|.+.+.+||..++.+... ..              ..........+ ..|    +.|+...+++.
T Consensus       148 ~~~G~l~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~  227 (292)
T PRK11272        148 NPWGAILILIASASWAFGSVWSSRLPLPVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAI  227 (292)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHH
Confidence            357999999999999999999998543221000 00              00000000011 123    23444456778


Q ss_pred             HHHHHHHhhcchhhhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhcceeE
Q 019052           77 IANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTI  132 (347)
Q Consensus        77 ~~~~~aL~~ap~slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~li  132 (347)
                      .++..++...+.+.+..+..+..+++++++.+++||+++..+++|.++++.|+.+.
T Consensus       228 ~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~  283 (292)
T PRK11272        228 SAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLV  283 (292)
T ss_pred             HHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHH
Confidence            89999999999999999999999999999999999999999999999999999765

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.56  E-value=0.00077  Score=55.57  Aligned_cols=91  Identities=13%  Similarity=-0.041  Sum_probs=71.5

Q ss_pred             HHHHHHHHHHHHhHhhhhhhccCCcccCCcccccccchhHHHHH-HHHHHHHHHHHHHHhhcchhhhhcchh-HHHHHHH
Q 019052           26 SSSIFIGSSFIVKKKGLKKAGASGVRAGFGGYSYLYEPLWWVGM-ITMVVGEIANFAAYAFAPAILVTPLGA-LSIIISA  103 (347)
Q Consensus        26 ~sa~~~a~G~~lqk~~~~~~~~~~~~~~~~~~~~l~~p~W~~G~-~l~~~g~~~~~~aL~~ap~slv~Pl~~-~~lv~~~  103 (347)
                      ++.++--.|....|++.                -++++.|.... .++.+++.+-..|+...|+++..++-+ ++.+.+.
T Consensus         8 ~Ai~~Ev~~t~~Lk~s~----------------gf~~~~~~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~   71 (105)
T PRK11431          8 IAGLLEVVWAVGLKYTH----------------GFSRLTPSIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAA   71 (105)
T ss_pred             HHHHHHHHHHHHHHhhh----------------CCccHHHHHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHH
Confidence            34556666666677631                12345554444 456778888888999999999998765 9999999


Q ss_pred             HHHHHHhccccccchhhHHHHHhhcceeE
Q 019052          104 ALAHIILRERLHIFGILGCILCVVGSTTI  132 (347)
Q Consensus       104 ~la~~~l~E~~~~~~~~G~~li~~G~~li  132 (347)
                      +.+.++.||+++..+++|+.+++.|++.+
T Consensus        72 lig~~~f~e~~~~~~~~gi~lIi~GVv~l  100 (105)
T PRK11431         72 ITGIVLLGESASPARLLSLALIVAGIIGL  100 (105)
T ss_pred             HHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence            99999999999999999999999999876

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.45  E-value=0.0034  Score=52.08  Aligned_cols=80  Identities=16%  Similarity=0.241  Sum_probs=61.8

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHhhcccCcceehhhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHH
Q 019052          219 LIYPQTWAFTLIVIVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAG  298 (347)
Q Consensus       219 ~~~~~~y~ll~~~v~~~l~Q~~~ln~aL~~~da~~vvP~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~lG~~l~i~G  298 (347)
                      +++|.........+.+...-.+++..++++-|....+|+.+ .-.+.+.+.|..+|||..+      ....+|+.++++|
T Consensus        31 ~~~~~~l~~~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~-l~~v~~~~~~~l~f~E~ls------~~~~~Gi~lii~G  103 (111)
T PRK15051         31 KRRKHIVLWLGLALACLGLAMVLWLLVLQNVPVGIAYPMLS-LNFVWVTLAAVKLWHEPVS------PRHWCGVAFIIGG  103 (111)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHH-HHHHHHHHHHHHHhCCCCC------HHHHHHHHHHHHH
Confidence            45554444444444555556778889999999999999998 7788889999999999765      4556788899999


Q ss_pred             HhhhccC
Q 019052          299 TFLLHKT  305 (347)
Q Consensus       299 VvlLs~~  305 (347)
                      +++++++
T Consensus       104 v~~i~~~  110 (111)
T PRK15051        104 IVILGST  110 (111)
T ss_pred             HHHHhcc
Confidence            9998864

>COG2510 Predicted membrane protein [Function unknown]

Probab=97.42  E-value=0.0014  Score=55.72  Aligned_cols=64  Identities=19%  Similarity=0.232  Sum_probs=49.9

Q ss_pred             HHHHHHHHHHHHhhcccCcceehhhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHhhhccC
Q 019052          233 VCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKT  305 (347)
Q Consensus       233 ~~~l~Q~~~ln~aL~~~da~~vvP~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~lG~~l~i~GVvlLs~~  305 (347)
                      .+...+.||  +||+.++++.|+|+- -..+..+++.+..+++|..+      .-...|+.++.+|+++++++
T Consensus        77 ~glswl~Yf--~ALk~G~as~VvPld-k~svvl~~lls~lfL~E~ls------~~~~iG~~LI~~Gailvs~~  140 (140)
T COG2510          77 GGLSWLLYF--RALKKGKASRVVPLD-KTSVVLAVLLSILFLGERLS------LPTWIGIVLIVIGAILVSLR  140 (140)
T ss_pred             HHHHHHHHH--HHHhcCCcceEEEcc-cccHHHHHHHHHHHhcCCCC------HHHHHHHHHHHhCeeeEecC
Confidence            334444555  799999999999984 34577888999999999765      33457899999999998863

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=97.40  E-value=0.0013  Score=63.14  Aligned_cols=115  Identities=20%  Similarity=0.247  Sum_probs=84.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhHhhhhhhccCC-cc--------------------cCCc----ccccccchh-H----H
Q 019052           17 NIKGLILALSSSIFIGSSFIVKKKGLKKAGASG-VR--------------------AGFG----GYSYLYEPL-W----W   66 (347)
Q Consensus        17 ~~iGv~lal~sa~~~a~G~~lqk~~~~~~~~~~-~~--------------------~~~~----~~~~l~~p~-W----~   66 (347)
                      ...|+.++++++++.+...+++||..++.+... ..                    .+..    .... .++. |    +
T Consensus       141 ~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~  219 (299)
T PRK11453        141 AMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVT-IDMTTILSLMY  219 (299)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhcc-CCHHHHHHHHH
Confidence            357999999999999999999998543221100 00                    0000    0000 1222 2    2


Q ss_pred             HHHHHHHHHHHHHHHHHhhcchhhhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhcceeE
Q 019052           67 VGMITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTI  132 (347)
Q Consensus        67 ~G~~l~~~g~~~~~~aL~~ap~slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~li  132 (347)
                      .|++..++++.++..++...+...+.++..+..+++.+++.+++||+++..+++|.+++++|+.+.
T Consensus       220 l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~  285 (299)
T PRK11453        220 LAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYIN  285 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHH
Confidence            244445677788888888899999999999999999999999999999999999999999998755

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.40  E-value=0.0013  Score=54.18  Aligned_cols=92  Identities=13%  Similarity=0.061  Sum_probs=72.1

Q ss_pred             HHHHHHHHHHHHHhHhhhhhhccCCcccCCcccccccchhHHHHH-HHHHHHHHHHHHHHhhcchhhhhcc-hhHHHHHH
Q 019052           25 LSSSIFIGSSFIVKKKGLKKAGASGVRAGFGGYSYLYEPLWWVGM-ITMVVGEIANFAAYAFAPAILVTPL-GALSIIIS  102 (347)
Q Consensus        25 l~sa~~~a~G~~lqk~~~~~~~~~~~~~~~~~~~~l~~p~W~~G~-~l~~~g~~~~~~aL~~ap~slv~Pl-~~~~lv~~  102 (347)
                      +++.++--.|....|++.                -++|+.|.+.+ .++++++.+-..|+...|+.+..++ .+++.+.+
T Consensus         8 ~lAi~~EV~~~~~lK~s~----------------gf~~~~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~   71 (106)
T COG2076           8 LLAILLEVVGTTLLKYSD----------------GFTRLWPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGT   71 (106)
T ss_pred             HHHHHHHHHHHHHHHHHh----------------cccccchHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHH
Confidence            344455556666677652                22345555544 4467788888889999999999886 78999999


Q ss_pred             HHHHHHHhccccccchhhHHHHHhhcceeE
Q 019052          103 AALAHIILRERLHIFGILGCILCVVGSTTI  132 (347)
Q Consensus       103 ~~la~~~l~E~~~~~~~~G~~li~~G~~li  132 (347)
                      .+.+.+++||+++..+++|..++++|++.+
T Consensus        72 ~l~g~~~f~E~l~~~~~~gl~LiiaGvi~L  101 (106)
T COG2076          72 ALVGVLLFGESLSLIKLLGLALILAGVIGL  101 (106)
T ss_pred             HHHHHHhcCCcCCHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999865

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=97.24  E-value=0.026  Score=55.47  Aligned_cols=69  Identities=17%  Similarity=0.191  Sum_probs=63.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcchhhhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhcceeEE
Q 019052           65 WWVGMITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIV  133 (347)
Q Consensus        65 W~~G~~l~~~g~~~~~~aL~~ap~slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~liv  133 (347)
                      |-+=-++|.+-+-++.++++-.|.+.-|....+-++.+++++..+|++|+++++|....+...|+.++-
T Consensus        95 ~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ  163 (345)
T KOG2234|consen   95 VSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQ  163 (345)
T ss_pred             HHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence            344456788887899999999999999999999999999999999999999999999999999999875

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.10  E-value=0.017  Score=47.93  Aligned_cols=80  Identities=19%  Similarity=0.168  Sum_probs=63.0

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCcceehhhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHH
Q 019052          218 QLIYPQTWAFTLIVIVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILA  297 (347)
Q Consensus       218 ~~~~~~~y~ll~~~v~~~l~Q~~~ln~aL~~~da~~vvP~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~lG~~l~i~  297 (347)
                      .|+++.+....   +++...-.+++.+++++-|..+.+|+-...-++...+.|.++|+|..+      ..-.+|+.+++.
T Consensus        26 gf~~~~~~i~~---~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~------~~~~~gi~lIi~   96 (110)
T PRK09541         26 GFTRLWPSVGT---IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLD------LPAIIGMMLICA   96 (110)
T ss_pred             CCCchhHHHHH---HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCC------HHHHHHHHHHHH
Confidence            46777776643   334444567789999999999999988877788889999999999775      456688899999


Q ss_pred             HHhhhccCC
Q 019052          298 GTFLLHKTK  306 (347)
Q Consensus       298 GVvlLs~~~  306 (347)
                      ||+++...+
T Consensus        97 GVi~l~l~~  105 (110)
T PRK09541         97 GVLVINLLS  105 (110)
T ss_pred             HHHHHhcCC
Confidence            999996544

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=96.94  E-value=0.0042  Score=57.68  Aligned_cols=116  Identities=23%  Similarity=0.240  Sum_probs=85.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhHhhhhhhccCC-cc------cC--------Ccc-c-ccccchhH--HHHHHHHHHHHH
Q 019052           17 NIKGLILALSSSIFIGSSFIVKKKGLKKAGASG-VR------AG--------FGG-Y-SYLYEPLW--WVGMITMVVGEI   77 (347)
Q Consensus        17 ~~iGv~lal~sa~~~a~G~~lqk~~~~~~~~~~-~~------~~--------~~~-~-~~l~~p~W--~~G~~l~~~g~~   77 (347)
                      ...|+.+++.++++.++..+++|+-. +..... ..      ..        ... . ...+....  ..|+...+++..
T Consensus       152 ~~~g~~~~l~a~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~  230 (292)
T COG0697         152 SLLGLLLALAAALLWALYTALVKRLS-RLGPVTLALLLQLLLALLLLLLFFLSGFGAPILSRAWLLLLYLGVFSTGLAYL  230 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence            57899999999999999999999755 211100 00      00        000 0 01111111  233333445788


Q ss_pred             HHHHHHhhcchhhhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhcceeEE
Q 019052           78 ANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIV  133 (347)
Q Consensus        78 ~~~~aL~~ap~slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~liv  133 (347)
                      ++..++...+...+.++..+..+++.+++.++++|+++.+++.|+++++.|+.+..
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~  286 (292)
T COG0697         231 LWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLAS  286 (292)
T ss_pred             HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHh
Confidence            88999999999999999999999999999999999999999999999999988653

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=96.93  E-value=0.12  Score=51.38  Aligned_cols=66  Identities=21%  Similarity=0.298  Sum_probs=57.6

Q ss_pred             HHHHHHHHHhhcchhhhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhcceeEEeecCCCC
Q 019052           75 GEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPAER  140 (347)
Q Consensus        75 g~~~~~~aL~~ap~slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~liv~~~~~~~  140 (347)
                      .+...=.||++-.++-..=+.+.+=+|++.++.++.+||+|..+.+++++.+.|++++.....++.
T Consensus       172 anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~  237 (416)
T KOG2765|consen  172 ANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQN  237 (416)
T ss_pred             HHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEecccccc
Confidence            333444589999999999999999999999999999999999999999999999999988766544

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=96.91  E-value=0.013  Score=50.04  Aligned_cols=75  Identities=15%  Similarity=0.182  Sum_probs=55.6

Q ss_pred             HHHHHHHHHHHHHHHHHhhcccCcceehhhHHHHHHHHHHHHHH-HHhcccCCCChHHHHHHHHHHHHHHHHHhhhccCC
Q 019052          228 TLIVIVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASV-IMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKTK  306 (347)
Q Consensus       228 l~~~v~~~l~Q~~~ln~aL~~~da~~vvP~~~v~~~~~~i~~G~-i~f~E~~~~~~~~~~~~~lG~~l~i~GVvlLs~~~  306 (347)
                      +...+++......+.+.++++.|.+..+|+....+....+.+-. ++|+|..+      ....+|.+++++||+++++++
T Consensus        51 i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls------~~~~iGi~lIi~GV~lv~~~~  124 (129)
T PRK02971         51 VLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFS------LKKTLGVACIMLGVWLINLPT  124 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCC------HHHHHHHHHHHHHHHHhccCC
Confidence            33444555666777889999999999999988776444444333 48999765      566789999999999999765


Q ss_pred             CC
Q 019052          307 DL  308 (347)
Q Consensus       307 ~~  308 (347)
                      +.
T Consensus       125 ~~  126 (129)
T PRK02971        125 TK  126 (129)
T ss_pred             CC
Confidence            53

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=96.86  E-value=0.23  Score=47.89  Aligned_cols=115  Identities=20%  Similarity=0.149  Sum_probs=72.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhHh----hhhhhcc--------------CCcccCCcccccccchhHHHHHHHHHHHHHHH
Q 019052           18 IKGLILALSSSIFIGSSFIVKKK----GLKKAGA--------------SGVRAGFGGYSYLYEPLWWVGMITMVVGEIAN   79 (347)
Q Consensus        18 ~iGv~lal~sa~~~a~G~~lqk~----~~~~~~~--------------~~~~~~~~~~~~l~~p~W~~G~~l~~~g~~~~   79 (347)
                      --|+++++.+.++.+.--...|.    +..+.-.              .-.+...+.++..|+|+=+....+..+=...|
T Consensus         6 ~~Gil~~l~Ay~lwG~lp~y~kll~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~~n   85 (293)
T COG2962           6 RKGILLALLAYLLWGLLPLYFKLLEPLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIGLN   85 (293)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence            34888888888877665555443    1111000              00011112345677887777776665555666


Q ss_pred             HHHHhhcchh---hhhcchh-HHHHHHHHHHHHHhccccccchhhHHHHHhhcceeE
Q 019052           80 FAAYAFAPAI---LVTPLGA-LSIIISAALAHIILRERLHIFGILGCILCVVGSTTI  132 (347)
Q Consensus        80 ~~aL~~ap~s---lv~Pl~~-~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~li  132 (347)
                      ..-+-++|-.   +=+.+|= +..++|.++++.++|||+++.||+.+.+..+|+...
T Consensus        86 W~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~  142 (293)
T COG2962          86 WWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQ  142 (293)
T ss_pred             HHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence            6666666544   2222221 234578899999999999999999999999998754

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.75  E-value=0.038  Score=45.56  Aligned_cols=78  Identities=10%  Similarity=0.159  Sum_probs=61.3

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCcceehhhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHH
Q 019052          218 QLIYPQTWAFTLIVIVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILA  297 (347)
Q Consensus       218 ~~~~~~~y~ll~~~v~~~l~Q~~~ln~aL~~~da~~vvP~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~lG~~l~i~  297 (347)
                      .|+++.++++.++   +...-.+++.+++|.-|..+.+++-...-++...+.|..+|+|..+      ....+|+.+++.
T Consensus        25 gf~~~~~~~~~i~---~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~------~~~~~gi~lIi~   95 (105)
T PRK11431         25 GFSRLTPSIITVT---AMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESAS------PARLLSLALIVA   95 (105)
T ss_pred             CCccHHHHHHHHH---HHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCC------HHHHHHHHHHHH
Confidence            4778887775533   3344467899999999988888888888888888999999999765      445678889999


Q ss_pred             HHhhhcc
Q 019052          298 GTFLLHK  304 (347)
Q Consensus       298 GVvlLs~  304 (347)
                      ||+.+..
T Consensus        96 GVv~l~l  102 (105)
T PRK11431         96 GIIGLKL  102 (105)
T ss_pred             HHHhhhc
Confidence            9999853

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=96.56  E-value=0.069  Score=45.09  Aligned_cols=70  Identities=19%  Similarity=0.326  Sum_probs=56.5

Q ss_pred             HHHHHHHHHHHHHhhcccCcceehhhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHhhhccCCC
Q 019052          232 IVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKTKD  307 (347)
Q Consensus       232 v~~~l~Q~~~ln~aL~~~da~~vvP~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~lG~~l~i~GVvlLs~~~~  307 (347)
                      +++...-.+++.++++.-|..+.+|+..-.-++...+.|..+|+|..+      ..-.+|+.+++.|++++....+
T Consensus        37 i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s------~~~~~gi~lIi~GVi~l~l~~~  106 (120)
T PRK10452         37 LVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLS------LMKIAGLTTLVAGIVLIKSGTR  106 (120)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCC------HHHHHHHHHHHHHHHHhhcCCC
Confidence            334444567889999999999999998877888889999999999775      5566888999999999865443

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.48  E-value=0.068  Score=44.36  Aligned_cols=77  Identities=19%  Similarity=0.221  Sum_probs=60.3

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCcceehhhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHH
Q 019052          218 QLIYPQTWAFTLIVIVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILA  297 (347)
Q Consensus       218 ~~~~~~~y~ll~~~v~~~l~Q~~~ln~aL~~~da~~vvP~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~lG~~l~i~  297 (347)
                      .|++|.+....++   +...-.+++.+++|+-|..+.+++-.-.-++...+.|.++|+|..+      ..-.+|+.+++.
T Consensus        31 gf~~~~~~~~~~~---~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~------~~~~~gi~lIi~  101 (109)
T PRK10650         31 GFRRKIYGILSLA---AVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLN------RKGWIGLVLLLA  101 (109)
T ss_pred             CCcchHHHHHHHH---HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCC------HHHHHHHHHHHH
Confidence            4788887655433   3334467899999999988888888888888889999999999765      455678888999


Q ss_pred             HHhhhc
Q 019052          298 GTFLLH  303 (347)
Q Consensus       298 GVvlLs  303 (347)
                      ||+++-
T Consensus       102 GVi~lk  107 (109)
T PRK10650        102 GMVMIK  107 (109)
T ss_pred             HHHHhc
Confidence            998873

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=96.37  E-value=0.039  Score=54.45  Aligned_cols=126  Identities=24%  Similarity=0.270  Sum_probs=79.6

Q ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHhHhhhhhhccC--------------Cccc----CCcccccccchhHHHHHHHHH
Q 019052           12 GMSSDNIKGLILALSSSIFIGSSFIVKKKGLKKAGAS--------------GVRA----GFGGYSYLYEPLWWVGMITMV   73 (347)
Q Consensus        12 ~~~s~~~iGv~lal~sa~~~a~G~~lqk~~~~~~~~~--------------~~~~----~~~~~~~l~~p~W~~G~~l~~   73 (347)
                      ...++..+|-+++++||+++|+..++|++-.++.+..              ..-.    ..+..+.-.+  |-.  ....
T Consensus       161 ~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~--~~~--~~~~  236 (334)
T PF06027_consen  161 SSGSNPILGDLLALLGAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISGIQLAILERSGIESIHWT--SQV--IGLL  236 (334)
T ss_pred             CCCCccchhHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCC--hhh--HHHH
Confidence            5678899999999999999999999999977654310              0000    0011111111  111  1122


Q ss_pred             HH-HHHHHHHHhhcch-------hhhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhcceeEEeecCCCCc
Q 019052           74 VG-EIANFAAYAFAPA-------ILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPAERE  141 (347)
Q Consensus        74 ~g-~~~~~~aL~~ap~-------slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~liv~~~~~~~~  141 (347)
                      +| .++.+.-+...|.       ..+.-=..++-++++++..++.|++++..-++|.++|+.|.++.....+++.+
T Consensus       237 v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~~~  312 (334)
T PF06027_consen  237 VGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPEEE  312 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCcccc
Confidence            22 2333333444443       32333234567889999999999999999999999999999987665554433

Some of the sequences in this family are annotated as putative membrane proteins.

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=96.14  E-value=0.17  Score=48.70  Aligned_cols=121  Identities=11%  Similarity=0.107  Sum_probs=85.5

Q ss_pred             hhHHHHHHHHHHH-HHHHHHHHHhHhhhhhhccCCccc-CCcccccccchhHHHHHHHHHHHHHHHHHHHhhcchhhhhc
Q 019052           16 DNIKGLILALSSS-IFIGSSFIVKKKGLKKAGASGVRA-GFGGYSYLYEPLWWVGMITMVVGEIANFAAYAFAPAILVTP   93 (347)
Q Consensus        16 ~~~iGv~lal~sa-~~~a~G~~lqk~~~~~~~~~~~~~-~~~~~~~l~~p~W~~G~~l~~~g~~~~~~aL~~ap~slv~P   93 (347)
                      ..++=.++..++- .|.++=..++.++..+...++... ..+..+-++-.....=.+|.+.|..+..++|.+...+--|-
T Consensus        38 hpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lfl~Pal~Di~gsslm~vgL~lTsASsfQM  117 (372)
T KOG3912|consen   38 HPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLFLPPALCDIAGSSLMYVGLNLTSASSFQM  117 (372)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcceecChHHHHHhhhHHHHHHHHHhhHHHHHH
Confidence            3444445555555 455555555555555433321110 01111223333334456788999999999999999999999


Q ss_pred             chhHHHHHHHHHHHHHhccccccchhhHHHHHhhcceeEEeec
Q 019052           94 LGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHA  136 (347)
Q Consensus        94 l~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~liv~~~  136 (347)
                      +-+.-++|.-+++.-+|+++++.++|.|+..+.+|.+.+....
T Consensus       118 lRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d  160 (372)
T KOG3912|consen  118 LRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLD  160 (372)
T ss_pred             hhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeee
Confidence            9999999999999999999999999999999999999887653

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=96.11  E-value=0.011  Score=56.66  Aligned_cols=62  Identities=13%  Similarity=-0.034  Sum_probs=57.2

Q ss_pred             HHHHHHHHHHHhhcchhhhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhcceeEEe
Q 019052           73 VVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVL  134 (347)
Q Consensus        73 ~~g~~~~~~aL~~ap~slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~liv~  134 (347)
                      .+++.++..+++..|.+.++++.-++.+++.+++.++++|+++..++.|.++++.|+.++..
T Consensus       224 ~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~  285 (296)
T PRK15430        224 TVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVM  285 (296)
T ss_pred             HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            36788999999999999999999999999999999999999999999999999888776543

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=96.06  E-value=0.058  Score=51.08  Aligned_cols=124  Identities=19%  Similarity=0.164  Sum_probs=90.1

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhHhhhhhhcc-CC--------------cccCCcccccccchhHHHHHHHHHH----H
Q 019052           15 SDNIKGLILALSSSIFIGSSFIVKKKGLKKAGA-SG--------------VRAGFGGYSYLYEPLWWVGMITMVV----G   75 (347)
Q Consensus        15 s~~~iGv~lal~sa~~~a~G~~lqk~~~~~~~~-~~--------------~~~~~~~~~~l~~p~W~~G~~l~~~----g   75 (347)
                      +....|+.+|+.+..|.+.=.+.-||..+..+. .+              ....+....++.-+.-..++..-++    =
T Consensus       144 ~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~~g~a~gm~vAaviv~Pig~~~ag~~l~~p~ll~laLgvavlSSalP  223 (292)
T COG5006         144 SLDPVGVALALGAGACWALYIVLGQRAGRAEHGTAGVAVGMLVAALIVLPIGAAQAGPALFSPSLLPLALGVAVLSSALP  223 (292)
T ss_pred             cCCHHHHHHHHHHhHHHHHHHHHcchhcccCCCchHHHHHHHHHHHHHhhhhhhhcchhhcChHHHHHHHHHHHHhcccc
Confidence            456789999999999999888888886642210 00              0000011223333333444444443    4


Q ss_pred             HHHHHHHHhhcchhhhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhcceeEEeecCC
Q 019052           76 EIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPA  138 (347)
Q Consensus        76 ~~~~~~aL~~ap~slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~liv~~~~~  138 (347)
                      +.+..+||...|...-.-+.++...+..+.+..+|||++|..||.|+.+++.++........+
T Consensus       224 YsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~  286 (292)
T COG5006         224 YSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARK  286 (292)
T ss_pred             hHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCC
Confidence            568999999999999999999999999999999999999999999999999998866444333

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=95.88  E-value=0.17  Score=41.45  Aligned_cols=66  Identities=24%  Similarity=0.293  Sum_probs=48.6

Q ss_pred             HHHHHHHHhhcccCcceehhhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHhhhccCCCCCC
Q 019052          237 TQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKTKDLGD  310 (347)
Q Consensus       237 ~Q~~~ln~aL~~~da~~vvP~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~lG~~l~i~GVvlLs~~~~~~~  310 (347)
                      .+......|+++.+ ..+.++. ...++++.+.|.++|+|..+  ..    ...|.+++.+|++++..++.+.+
T Consensus        47 ~~~~~~~~a~~~~~-~~v~~i~-~~~pi~~~ll~~~~~~er~~--~~----~~~a~~l~~~Gv~li~~~~~~~~  112 (113)
T PF13536_consen   47 VAYLLFFYALSYAP-ALVAAIF-SLSPIFTALLSWLFFKERLS--PR----RWLAILLILIGVILIAWSDLTGA  112 (113)
T ss_pred             HHHHHHHHHHHhCc-HHHHHHH-HHHHHHHHHHHHHHhcCCCC--HH----HHHHHHHHHHHHHHHhhhhcccC
Confidence            44555567888888 4555554 56899999999999999654  33    45677888999999987765543

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=95.77  E-value=0.066  Score=44.20  Aligned_cols=78  Identities=22%  Similarity=0.205  Sum_probs=59.6

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHhhcccCcceehhhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHH
Q 019052          219 LIYPQTWAFTLIVIVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAG  298 (347)
Q Consensus       219 ~~~~~~y~ll~~~v~~~l~Q~~~ln~aL~~~da~~vvP~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~lG~~l~i~G  298 (347)
                      |+.+.+++..++   +...-.+++.+|+|.-|..+.+++-.-.-++...+.|.++|+|..+      ..-..|+.++++|
T Consensus        27 f~~~~~~il~~v---~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~------~~~~~gl~LiiaG   97 (106)
T COG2076          27 FTRLWPSILTIV---GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLS------LIKLLGLALILAG   97 (106)
T ss_pred             ccccchHHHHHH---HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCC------HHHHHHHHHHHHH
Confidence            566665554333   3334467889999999988888888888888888899999999876      4566788899999


Q ss_pred             HhhhccC
Q 019052          299 TFLLHKT  305 (347)
Q Consensus       299 VvlLs~~  305 (347)
                      ++.|-..
T Consensus        98 vi~Lk~~  104 (106)
T COG2076          98 VIGLKLG  104 (106)
T ss_pred             HHHhhhc
Confidence            9988543

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=95.75  E-value=0.019  Score=54.98  Aligned_cols=118  Identities=14%  Similarity=0.182  Sum_probs=79.1

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhHhhhhhhccCCccc-------CC----------ccccccc----------c--hhH
Q 019052           15 SDNIKGLILALSSSIFIGSSFIVKKKGLKKAGASGVRA-------GF----------GGYSYLY----------E--PLW   65 (347)
Q Consensus        15 s~~~iGv~lal~sa~~~a~G~~lqk~~~~~~~~~~~~~-------~~----------~~~~~l~----------~--p~W   65 (347)
                      +....|.+++++++++.++..++.||...+.+.+....       +.          +..+...          .  ..|
T Consensus       141 ~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (302)
T TIGR00817       141 SFNWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIY  220 (302)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHH
Confidence            34567999999999999999999998654211100000       00          0000000          0  112


Q ss_pred             HHHHH----HHHHHHHHHHHHHhhcchhhhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhcceeE
Q 019052           66 WVGMI----TMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTI  132 (347)
Q Consensus        66 ~~G~~----l~~~g~~~~~~aL~~ap~slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~li  132 (347)
                      ..++.    ++...+..++.++...+.+...-.+.+..+++.+++.+++||+++..+++|.++++.|+.+.
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~  291 (302)
T TIGR00817       221 TVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLY  291 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHH
Confidence            11211    12222245556788888888999999999999999999999999999999999999998754

specificities overlap.

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=95.33  E-value=0.1  Score=44.30  Aligned_cols=112  Identities=23%  Similarity=0.291  Sum_probs=75.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhHhhhhhh----ccC-------------------------CcccCCccccccc-----c--h
Q 019052           20 GLILALSSSIFIGSSFIVKKKGLKKA----GAS-------------------------GVRAGFGGYSYLY-----E--P   63 (347)
Q Consensus        20 Gv~lal~sa~~~a~G~~lqk~~~~~~----~~~-------------------------~~~~~~~~~~~l~-----~--p   63 (347)
                      |.++++.|+++.++=.+++|+..++.    .+.                         +.+......+..+     .  .
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            67889999999999999988877663    100                         0000000000110     1  1


Q ss_pred             hHHHHHHH--HHHHHHHHHHHHhhcchhhhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhccee
Q 019052           64 LWWVGMIT--MVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTT  131 (347)
Q Consensus        64 ~W~~G~~l--~~~g~~~~~~aL~~ap~slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~l  131 (347)
                      .+++....  ..+-+..++..+...+...-+=++.+--+.+.+++..+++|+++.+++.|+.++++|...
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~  150 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence            22221111  123445666677777777788888899999999999999999999999999999999864

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=95.24  E-value=0.031  Score=53.69  Aligned_cols=114  Identities=23%  Similarity=0.180  Sum_probs=83.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhHhhhhhhccCC-c-cc-----CCc----c----cccccchhHH----HHHHHHHHHHH
Q 019052           17 NIKGLILALSSSIFIGSSFIVKKKGLKKAGASG-V-RA-----GFG----G----YSYLYEPLWW----VGMITMVVGEI   77 (347)
Q Consensus        17 ~~iGv~lal~sa~~~a~G~~lqk~~~~~~~~~~-~-~~-----~~~----~----~~~l~~p~W~----~G~~l~~~g~~   77 (347)
                      ...|+..+++++++++.-...=|+.. ..+... . ..     +..    .    ++. .+..+|    .|+. ..+++.
T Consensus       150 ~~~Gi~~~l~sg~~y~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Gi~-~~ia~~  226 (290)
T TIGR00776       150 FKKGILLLLMSTIGYLVYVVVAKAFG-VDGLSVLLPQAIGMVIGGIIFNLGHILAKPL-KKYAILLNILPGLM-WGIGNF  226 (290)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHcC-CCcceehhHHHHHHHHHHHHHHHHHhcccch-HHHHHHHHHHHHHH-HHHHHH
Confidence            46699999999999999888888642 111100 0 00     000    0    111 122333    4444 467888


Q ss_pred             HHHHHHh-hcchhhhhcchhHHHHHHHHHHHHHhccccccchh----hHHHHHhhcceeEE
Q 019052           78 ANFAAYA-FAPAILVTPLGALSIIISAALAHIILRERLHIFGI----LGCILCVVGSTTIV  133 (347)
Q Consensus        78 ~~~~aL~-~ap~slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~----~G~~li~~G~~liv  133 (347)
                      +.+.++. ..+.+...++..+..+.+.+.+.+++||+.+++++    +|.++++.|+.++.
T Consensus       227 ~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~  287 (290)
T TIGR00776       227 FYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG  287 (290)
T ss_pred             HHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence            8888889 99999999999999999999999999999999999    99999999988764

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=94.95  E-value=0.22  Score=39.78  Aligned_cols=65  Identities=12%  Similarity=0.093  Sum_probs=31.9

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCcceehhhHHHHHHHHHHHHHHHHhcccCCCChHHHHH
Q 019052          218 QLIYPQTWAFTLIVIVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVT  287 (347)
Q Consensus       218 ~~~~~~~y~ll~~~v~~~l~Q~~~ln~aL~~~da~~vvP~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~  287 (347)
                      .++++.++...   +.+-..-.+++.+++++-|..+.+|+....-++...+.|..+|+|..+  ..++..
T Consensus        25 g~~~~~~~~~~---~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s--~~~~~g   89 (93)
T PF00893_consen   25 GFTQLIPTILA---VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLS--LSKWLG   89 (93)
T ss_dssp             ---------HH---HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH----------HHH
T ss_pred             hhcchhhHHHH---HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCC--HHHHhh
Confidence            35566555433   224445568899999999999999999988889999999999999654  444433

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=94.86  E-value=0.087  Score=42.42  Aligned_cols=66  Identities=14%  Similarity=0.247  Sum_probs=50.1

Q ss_pred             HHHHHHHHHHHHHHhhcccCcceehhhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHhhhc
Q 019052          231 VIVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLH  303 (347)
Q Consensus       231 ~v~~~l~Q~~~ln~aL~~~da~~vvP~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~lG~~l~i~GVvlLs  303 (347)
                      .+.+......+.+.|+++.+++.+.++.+ ..++.+.+.|.++++|..+      .....|+.+++.|+++++
T Consensus        60 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~-~~pv~~~i~~~~~~~e~~~------~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   60 GLLGTALAYLLYFYALKYISASIVSILQY-LSPVFAAILGWLFLGERPS------WRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             hccceehHHHHHHHHHHhcchhHHHHHHH-HHHHHHHHHHHHHcCCCCC------HHHHHHHHHHHHHHHHHH
Confidence            33333444566788999999998888877 6899999999999999764      345677777888887764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=94.83  E-value=3.8  Score=39.08  Aligned_cols=201  Identities=13%  Similarity=0.111  Sum_probs=101.8

Q ss_pred             HHHHHHHhhcchhhhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhcceeEEeecCCCCcccCHHHHHHHhcchh
Q 019052           77 IANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPAEREIESVIEVWNLATEPA  156 (347)
Q Consensus        77 ~~~~~aL~~ap~slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~liv~~~~~~~~~~t~~el~~~~~~~~  156 (347)
                      ++--.++...|+-+...+--.+.+....++.+      +.+|.+.+.+.+.|..++.-.++..++. +          |-
T Consensus        86 l~FY~si~riPlGiAVAiEF~GPL~vA~~~sR------r~~d~vwvaLAvlGi~lL~p~~~~~~~l-D----------p~  148 (292)
T COG5006          86 LLFYLSIERIPLGIAVAIEFTGPLAVALLSSR------RLRDFVWVALAVLGIWLLLPLGQSVWSL-D----------PV  148 (292)
T ss_pred             HHHHHHHHhccchhhhhhhhccHHHHHHHhcc------chhhHHHHHHHHHHHHhheeccCCcCcC-C----------HH
Confidence            44456788889888877776666655554443      4567788888899988886655443332 1          21


Q ss_pred             HHHHHHHHHHHHHHHHHhh-ccccCc-chhHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCcccchhHHHHHHHH-HHH
Q 019052          157 FLLYAALVITAVFILIFHY-IPQYGQ-THIMVYIGVCSLVGSLSVMSVKAIGIALKLTLSGMNQLIYPQTWAFTLI-VIV  233 (347)
Q Consensus       157 fl~y~~~~~~~~~~l~~~~-~~r~g~-~~~l~y~~~~gllgg~t~l~~K~v~~~l~~~~~g~~~~~~~~~y~ll~~-~v~  233 (347)
                      =..|....  -.+...|.+ .+|.|+ .+.-.-.+++-+++++-++- -+++       +....+.+|..-..-+. .+.
T Consensus       149 Gv~~Al~A--G~~Wa~YIv~G~r~g~~~~g~~g~a~gm~vAaviv~P-ig~~-------~ag~~l~~p~ll~laLgvavl  218 (292)
T COG5006         149 GVALALGA--GACWALYIVLGQRAGRAEHGTAGVAVGMLVAALIVLP-IGAA-------QAGPALFSPSLLPLALGVAVL  218 (292)
T ss_pred             HHHHHHHH--hHHHHHHHHHcchhcccCCCchHHHHHHHHHHHHHhh-hhhh-------hcchhhcChHHHHHHHHHHHH
Confidence            11121111  112222322 344442 11111111111222222211 0101       12234555553332222 222


Q ss_pred             HHHHHHHHHHHhhcccCcceehhhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHhhhccCCCC
Q 019052          234 CVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKTKDL  308 (347)
Q Consensus       234 ~~l~Q~~~ln~aL~~~da~~vvP~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~lG~~l~i~GVvlLs~~~~~  308 (347)
                      +...--..-.-+|++-++. ..-+..+.++..+-+.|.+++||..  +..||+...+= .....|+.+=.+++..
T Consensus       219 SSalPYsLEmiAL~rlp~~-~F~~LlSLePa~aAl~G~i~L~e~l--s~~qwlaI~~V-iaAsaG~~lt~~~~~~  289 (292)
T COG5006         219 SSALPYSLEMIALRRLPAR-TFGTLLSLEPALAALSGLIFLGETL--TLIQWLAIAAV-IAASAGSTLTARKPAV  289 (292)
T ss_pred             hcccchHHHHHHHhhCChh-HHHHHHHhhHHHHHHHHHHHhcCCC--CHHHHHHHHHH-HHHHhccccccCCCCC
Confidence            2222222234488877654 5667788899999999999999975  56676655433 2344555554444443

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=94.08  E-value=1  Score=41.50  Aligned_cols=62  Identities=24%  Similarity=0.210  Sum_probs=56.0

Q ss_pred             HHHHHHHHHhhcchhhhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhcceeEEeec
Q 019052           75 GEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHA  136 (347)
Q Consensus        75 g~~~~~~aL~~ap~slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~liv~~~  136 (347)
                      .+.....||.....+.+..+.+..--|..+++...||+|+...+++.+.+.+.|++++.+..
T Consensus        66 aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~D  127 (290)
T KOG4314|consen   66 ANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYAD  127 (290)
T ss_pred             CCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEecc
Confidence            44667888999999999999999999999999999999999999999999999999886643

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=93.99  E-value=0.39  Score=46.02  Aligned_cols=66  Identities=21%  Similarity=0.309  Sum_probs=53.2

Q ss_pred             HhhcccCcceehhhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHhhhccCCCCCCC
Q 019052          244 MALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKTKDLGDG  311 (347)
Q Consensus       244 ~aL~~~da~~vvP~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~lG~~l~i~GVvlLs~~~~~~~~  311 (347)
                      ++.++-.-+...|+-+..--+.+.+.|+++|+||..  ..+...=.++++++++|+++-+.+++.++.
T Consensus        64 ~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~--~~~~~~G~~Al~liiiGv~lts~~~~~~~~  129 (269)
T PF06800_consen   64 KSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTT--TTQKIIGFLALVLIIIGVILTSYQDKKSDK  129 (269)
T ss_pred             HHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCC--cchHHHHHHHHHHHHHHHHHhccccccccc
Confidence            455666667889999998889999999999999985  445566667889999999999887776654

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=93.96  E-value=0.47  Score=45.66  Aligned_cols=79  Identities=15%  Similarity=0.218  Sum_probs=62.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhc-chhhhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhcceeEEeecCCCCc
Q 019052           63 PLWWVGMITMVVGEIANFAAYAFA-PAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPAERE  141 (347)
Q Consensus        63 p~W~~G~~l~~~g~~~~~~aL~~a-p~slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~liv~~~~~~~~  141 (347)
                      ..|..=+.++..-+..|=.|+.|. |.-+=-=+=+.+++.|+.+++.++|+|-+.+++..++++.+|+++...+..++..
T Consensus        65 k~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~  144 (330)
T KOG1583|consen   65 KDYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGR  144 (330)
T ss_pred             hhhheehheeeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchh
Confidence            355666666667777887788775 3333334668899999999999999999999999999999999998887766553

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=93.78  E-value=0.68  Score=45.42  Aligned_cols=62  Identities=13%  Similarity=0.229  Sum_probs=56.4

Q ss_pred             HHHHHHHHHHHhhcchhhhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhcceeEEe
Q 019052           73 VVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVL  134 (347)
Q Consensus        73 ~~g~~~~~~aL~~ap~slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~liv~  134 (347)
                      .+|-.+.-.++..-|++.+|-+-++..++++++++++.+|+.+...+.-...++.|+.+...
T Consensus        94 ~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~  155 (316)
T KOG1441|consen   94 CISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASV  155 (316)
T ss_pred             HHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeee
Confidence            46777788899999999999999999999999999999999999999999999999886644

>TIGR00803 nst UDP-galactose transporter

Probab=93.36  E-value=0.51  Score=43.13  Aligned_cols=117  Identities=21%  Similarity=0.244  Sum_probs=80.4

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhHhhhhhhccC------C--------------cccCC--cccc-cc-cchhHHHHHH
Q 019052           15 SDNIKGLILALSSSIFIGSSFIVKKKGLKKAGAS------G--------------VRAGF--GGYS-YL-YEPLWWVGMI   70 (347)
Q Consensus        15 s~~~iGv~lal~sa~~~a~G~~lqk~~~~~~~~~------~--------------~~~~~--~~~~-~l-~~p~W~~G~~   70 (347)
                      .+...|+...+.+.++-++..+.|++..++.+..      .              ..++.  .... .. ..+.+|.-.+
T Consensus        81 g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (222)
T TIGR00803        81 GNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIVGL  160 (222)
T ss_pred             ccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHHHH
Confidence            3567787777777788888889998875543200      0              00000  0011 01 1222333334


Q ss_pred             HHHHHHHHHHHHHhhcchhhhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhccee
Q 019052           71 TMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTT  131 (347)
Q Consensus        71 l~~~g~~~~~~aL~~ap~slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~l  131 (347)
                      +...|.++-...+.+++.....=...+..+++.+++.++++|+++...|.|+.++..|+.+
T Consensus       161 ~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       161 LNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            4456666666778888888999999999999999999999999999999999999998753

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=92.60  E-value=0.78  Score=45.29  Aligned_cols=51  Identities=14%  Similarity=0.272  Sum_probs=43.2

Q ss_pred             HHHhhcchhhhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhccee
Q 019052           81 AAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTT  131 (347)
Q Consensus        81 ~aL~~ap~slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~l  131 (347)
                      .++...+.....=.+.+.-++..+++.+++||+++..+++|.++++.|+.+
T Consensus       295 ~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~l  345 (350)
T PTZ00343        295 YCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALL  345 (350)
T ss_pred             HHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHH
Confidence            456666666666677778889999999999999999999999999999865

>COG1742 Uncharacterized conserved protein [Function unknown]

Probab=91.67  E-value=1  Score=36.95  Aligned_cols=49  Identities=22%  Similarity=0.415  Sum_probs=40.1

Q ss_pred             hhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhcceeEEeecCCC
Q 019052           90 LVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPAE  139 (347)
Q Consensus        90 lv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~liv~~~~~~  139 (347)
                      +-+.-|.+-++.+++-....-|.+.++.||.|.++|.+|+.++ .++|..
T Consensus        60 vYAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vi-l~~pR~  108 (109)
T COG1742          60 VYAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVI-LFGPRG  108 (109)
T ss_pred             HHHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeee-EeCCCC
Confidence            4456678888888999999999999999999999999996655 556643

>PRK02237 hypothetical protein; Provisional

Probab=91.42  E-value=0.77  Score=37.97  Aligned_cols=48  Identities=21%  Similarity=0.373  Sum_probs=39.9

Q ss_pred             hhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhcceeEEeecCC
Q 019052           90 LVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPA  138 (347)
Q Consensus        90 lv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~liv~~~~~  138 (347)
                      +-+.-|.+-++.+++-.+..-|+|.++.|++|.++|.+|+.++ .++|+
T Consensus        61 vYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI-~~~pR  108 (109)
T PRK02237         61 VYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVI-MYAPR  108 (109)
T ss_pred             HHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHh-eecCC
Confidence            3455677778888899999999999999999999999998866 45554

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=91.35  E-value=0.29  Score=40.41  Aligned_cols=104  Identities=17%  Similarity=0.174  Sum_probs=76.5

Q ss_pred             HHHHHHHHHhHhhhhhhccC-Cc-c----cCCcccccccchhHHHHHHHHHHHHHHHHHHHhhcchhhhhcch-hHHHHH
Q 019052           29 IFIGSSFIVKKKGLKKAGAS-GV-R----AGFGGYSYLYEPLWWVGMITMVVGEIANFAAYAFAPAILVTPLG-ALSIII  101 (347)
Q Consensus        29 ~~~a~G~~lqk~~~~~~~~~-~~-~----~~~~~~~~l~~p~W~~G~~l~~~g~~~~~~aL~~ap~slv~Pl~-~~~lv~  101 (347)
                      ++.+.-+.+-||+...-++. ++ +    .-.+.+.++.|+..++=+++---|+.+.+.-|+-+|.++..|+. ++++.|
T Consensus        13 llWG~Tnplirrgs~g~~~v~~~~~k~~~~lqe~~tl~l~w~Y~iPFllNqcgSaly~~tLa~a~islavpv~nsltfaf   92 (125)
T KOG4831|consen   13 LLWGATNPLIRRGSLGWDKVKSSSRKIMIALQEMKTLFLNWEYLIPFLLNQCGSALYYLTLASAPISLAVPVTNSLTFAF   92 (125)
T ss_pred             HHHccccHHHHHHHhhHhhccCchHHHHHHHHHHHHHHHhHHHHHHHHHHHhhHHHHHHHHhcCCceeeeeecchhHHHH
Confidence            55666667777765443221 11 0    01134566778888999999888999999999999999999985 678899


Q ss_pred             HHHHHHHHhccccccch-hhHHHHHhhcceeEE
Q 019052          102 SAALAHIILRERLHIFG-ILGCILCVVGSTTIV  133 (347)
Q Consensus       102 ~~~la~~~l~E~~~~~~-~~G~~li~~G~~liv  133 (347)
                      +.+++..+ +|+...+. ..|+.++++|+.+.+
T Consensus        93 ta~~G~~L-GE~~~g~~a~lGt~liv~Gi~Lci  124 (125)
T KOG4831|consen   93 TAIFGKAL-GEETQGGLALLGTSLIVFGIWLCI  124 (125)
T ss_pred             HHHHHHHh-ccccccceeehhhhHHhhhhhhee
Confidence            99988765 77766555 679999999987653

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=91.23  E-value=1.3  Score=42.51  Aligned_cols=117  Identities=21%  Similarity=0.168  Sum_probs=72.6

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhHhhhhhhccCCccc-------C-------------Cc----ccccccchhHHHHHH
Q 019052           15 SDNIKGLILALSSSIFIGSSFIVKKKGLKKAGASGVRA-------G-------------FG----GYSYLYEPLWWVGMI   70 (347)
Q Consensus        15 s~~~iGv~lal~sa~~~a~G~~lqk~~~~~~~~~~~~~-------~-------------~~----~~~~l~~p~W~~G~~   70 (347)
                      .++..|+++.+++-++.++-.+.|+|-.++.+.+..+.       +             .+    ..-..+.|..+.-++
T Consensus       150 ~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~  229 (303)
T PF08449_consen  150 FSSALGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLL  229 (303)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHH
Confidence            33445999999999999999999999876644321000       0             00    001122233333333


Q ss_pred             HH-HHHHHHHHHH---HhhcchhhhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhccee
Q 019052           71 TM-VVGEIANFAA---YAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTT  131 (347)
Q Consensus        71 l~-~~g~~~~~~a---L~~ap~slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~l  131 (347)
                      +. ..+.+++...   ...-......-+..+--+++.+++..+.+++++..+|.|+.++..|..+
T Consensus       230 ~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~  294 (303)
T PF08449_consen  230 LFSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFL  294 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHH
Confidence            32 2333433222   2223333344455566678899999999999999999999999999764

; GO: 0055085 transmembrane transport

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=90.96  E-value=0.19  Score=47.53  Aligned_cols=219  Identities=16%  Similarity=0.228  Sum_probs=124.6

Q ss_pred             chhHHHHHHH---HHHHHHHHHHHHhhcchhhhhcch-hHHHHHHHHHHHHHhccccccchh----hHHHHHhhcceeEE
Q 019052           62 EPLWWVGMIT---MVVGEIANFAAYAFAPAILVTPLG-ALSIIISAALAHIILRERLHIFGI----LGCILCVVGSTTIV  133 (347)
Q Consensus        62 ~p~W~~G~~l---~~~g~~~~~~aL~~ap~slv~Pl~-~~~lv~~~~la~~~l~E~~~~~~~----~G~~li~~G~~liv  133 (347)
                      -..|..|++-   -.+|...|+-|......|...|+. +.+++-+.+++-+.+||=-+..+.    ++.++++.|+.+-.
T Consensus        56 ~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs  135 (288)
T COG4975          56 LTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTS  135 (288)
T ss_pred             hhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEee
Confidence            3467777754   247888999999999999999996 578999999999999997777663    46788899988776


Q ss_pred             eecCCCCcccCHHHHHHHhcchhHHHHHHHHHHHHH--HHHHhhccccCcchhHHHHHHHHHhhHHHHHHHHHHHHHHH-
Q 019052          134 LHAPAEREIESVIEVWNLATEPAFLLYAALVITAVF--ILIFHYIPQYGQTHIMVYIGVCSLVGSLSVMSVKAIGIALK-  210 (347)
Q Consensus       134 ~~~~~~~~~~t~~el~~~~~~~~fl~y~~~~~~~~~--~l~~~~~~r~g~~~~l~y~~~~gllgg~t~l~~K~v~~~l~-  210 (347)
                      .-.+.+.+..+.+++.+-.          +.....-  ...|.+..|.=.            +.+.++++-++++-.+. 
T Consensus       136 ~~~~~nk~~~~~~n~kkgi----------~~L~iSt~GYv~yvvl~~~f~------------v~g~saiLPqAiGMv~~a  193 (288)
T COG4975         136 KQDRNNKEEENPSNLKKGI----------VILLISTLGYVGYVVLFQLFD------------VDGLSAILPQAIGMVIGA  193 (288)
T ss_pred             eeccccccccChHhhhhhe----------eeeeeeccceeeeEeeecccc------------ccchhhhhHHHHHHHHHH
Confidence            6555444444544443311          0000000  001111222100            23333333333322111 


Q ss_pred             --HHhcCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCcceehhhHHHHHHHHHHHHHHHHhcccCCCChHHHHHH
Q 019052          211 --LTLSGMNQLIYPQTWAFTLIVIVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTE  288 (347)
Q Consensus       211 --~~~~g~~~~~~~~~y~ll~~~v~~~l~Q~~~ln~aL~~~da~~vvP~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~  288 (347)
                        ....+.+-..+-.+|.-+...+.-+..-+.++-.+=+..-++ ...+-|.. .+.+.++|+.+++|.+  +..++...
T Consensus       194 li~~~~~~~~~~~K~t~~nii~G~~Wa~GNl~ml~a~~~~GvAt-~FSlSQlg-ViisTiGGIl~L~ekK--tkkEm~~v  269 (288)
T COG4975         194 LILGFFKMEKRFNKYTWLNIIPGLIWAIGNLFMLLAAQKVGVAT-SFSLSQLG-VIISTIGGILFLGEKK--TKKEMVYV  269 (288)
T ss_pred             HHHhhcccccchHHHHHHHHhhHHHHHhhHHHHHHhhhhhceee-eeeHhhhe-eeeeecceEEEEeccC--chhhhhhh
Confidence              011222334445555544444333333322221111222111 11122221 2356789999999987  58899999


Q ss_pred             HHHHHHHHHHHhhhccCC
Q 019052          289 MCGFVTILAGTFLLHKTK  306 (347)
Q Consensus       289 ~lG~~l~i~GVvlLs~~~  306 (347)
                      ..|+.++++|.+++.--|
T Consensus       270 ~iGiilivvgai~lg~~K  287 (288)
T COG4975         270 IIGIILIVVGAILLGIAK  287 (288)
T ss_pred             hhhHHHHHHHhhhhheec
Confidence            999999999999987554

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=90.55  E-value=16  Score=34.72  Aligned_cols=211  Identities=16%  Similarity=0.115  Sum_probs=104.3

Q ss_pred             HHHHHHHHHHHHHHhhcchhhhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhcceeEEeecCC----CCcccCH
Q 019052           70 ITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPA----EREIESV  145 (347)
Q Consensus        70 ~l~~~g~~~~~~aL~~ap~slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~liv~~~~~----~~~~~t~  145 (347)
                      .-|.+..+..=.|+.+.|.-.---=-+.-.+=.++++-.+.|.+-++++...+++|++|+.++..--++    +++..-.
T Consensus        93 ~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~  172 (337)
T KOG1580|consen   93 ASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGF  172 (337)
T ss_pred             HHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccch
Confidence            334455555555666665432110112223455778888999999999999999999999988765333    2222233


Q ss_pred             HHHHHHhcchhHHHHHHHHH-HHHHHHHHhhcc--ccCcchhHHHHH-HHHHhhHHHHHHHHHHHHHHHHHhcCCcccch
Q 019052          146 IEVWNLATEPAFLLYAALVI-TAVFILIFHYIP--QYGQTHIMVYIG-VCSLVGSLSVMSVKAIGIALKLTLSGMNQLIY  221 (347)
Q Consensus       146 ~el~~~~~~~~fl~y~~~~~-~~~~~l~~~~~~--r~g~~~~l~y~~-~~gllgg~t~l~~K~v~~~l~~~~~g~~~~~~  221 (347)
                      .|+.-.++         +.. ......-=+++.  +.+..+.+.|.- .+.+.=|...+++-    .+.+.+.  ..-+|
T Consensus       173 GElLL~lS---------L~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTG----ElweF~y--F~~Rh  237 (337)
T KOG1580|consen  173 GELLLILS---------LAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTG----ELWEFFY--FVQRH  237 (337)
T ss_pred             HHHHHHHH---------HHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehh----hHHHHHH--HHHhc
Confidence            34322110         000 000000001111  112223333322 33332222222211    1111100  12357


Q ss_pred             hHHHH-HHHHHHHHHHHHHHHHHHhhcccCcceehhhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHh
Q 019052          222 PQTWA-FTLIVIVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTF  300 (347)
Q Consensus       222 ~~~y~-ll~~~v~~~l~Q~~~ln~aL~~~da~~vvP~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~lG~~l~i~GVv  300 (347)
                      |..|. +....+.+++.|. |.=+-...|.|.. ..+.+..--++++++++++|+...  ++.||    +|..+++.|..
T Consensus       238 P~~~~~l~l~ai~s~LGQ~-fIF~tv~~FgPLt-CSivTTTRKfFTil~SVllf~npl--s~rQw----lgtvlVF~aL~  309 (337)
T KOG1580|consen  238 PYVFWDLTLLAIASCLGQW-FIFKTVEEFGPLT-CSIVTTTRKFFTILISVLLFNNPL--SGRQW----LGTVLVFSALT  309 (337)
T ss_pred             cHHHHHHHHHHHHHHhhhH-HHHHHHHHhCCee-EEEEeehHHHHHHHHHHHHhcCcC--cHHHH----HHHHHHHHHhh
Confidence            76654 4555566667763 4444455565432 223333455688999999999854  56555    55666666554


Q ss_pred             hhc
Q 019052          301 LLH  303 (347)
Q Consensus       301 lLs  303 (347)
                      .-.
T Consensus       310 ~D~  312 (337)
T KOG1580|consen  310 ADV  312 (337)
T ss_pred             hHh
Confidence            433

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=88.66  E-value=1.3  Score=44.18  Aligned_cols=131  Identities=20%  Similarity=0.246  Sum_probs=89.9

Q ss_pred             CccccCCc--hhhHHHHHHHHHHHHHHHHHHHHhHhhhhhhccC-Cccc--C---Ccccccccch---------------
Q 019052            7 HSWRDGMS--SDNIKGLILALSSSIFIGSSFIVKKKGLKKAGAS-GVRA--G---FGGYSYLYEP---------------   63 (347)
Q Consensus         7 ~~~~~~~~--s~~~iGv~lal~sa~~~a~G~~lqk~~~~~~~~~-~~~~--~---~~~~~~l~~p---------------   63 (347)
                      ++|..+..  +...+|-++|+.||+++|+=.++-||...+++++ +...  |   --..-++.-|               
T Consensus       233 ~s~~~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP  312 (416)
T KOG2765|consen  233 DSKQNSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELP  312 (416)
T ss_pred             cccccccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCC
Confidence            34444443  4459999999999999999999999977666321 1110  0   0000001111               


Q ss_pred             -------hHHHHHHHHHHHHHHHHHHHhhcchhhhhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhcceeEEeec
Q 019052           64 -------LWWVGMITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHA  136 (347)
Q Consensus        64 -------~W~~G~~l~~~g~~~~~~aL~~ap~slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~liv~~~  136 (347)
                             ....|.+..+++-.+|..|.-.-...++.-=.++++..+++.=..+-+.+.+...++|.+.|.+|-+++-...
T Consensus       313 ~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~  392 (416)
T KOG2765|consen  313 SSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISS  392 (416)
T ss_pred             CCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccc
Confidence                   1245655667777888888887777777777778888888777777788999999999999999988775544


Q ss_pred             C
Q 019052          137 P  137 (347)
Q Consensus       137 ~  137 (347)
                      .
T Consensus       393 ~  393 (416)
T KOG2765|consen  393 E  393 (416)
T ss_pred             c
Confidence            3

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=88.34  E-value=2.2  Score=35.66  Aligned_cols=73  Identities=19%  Similarity=0.185  Sum_probs=49.6

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHhhcccCcceehhhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHH
Q 019052          219 LIYPQTWAFTLIVIVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAG  298 (347)
Q Consensus       219 ~~~~~~y~ll~~~v~~~l~Q~~~ln~aL~~~da~~vvP~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~lG~~l~i~G  298 (347)
                      +.+|...+-+++-..+.+.    ..-.|++.|-+..+|+.+..--+++.+.|..+.+|...  .    --.+|+.++++|
T Consensus        39 l~n~~y~ipf~lNq~GSv~----f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~--~----~~~~G~~Li~~G  108 (113)
T PF10639_consen   39 LLNPKYIIPFLLNQSGSVL----FFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVIS--R----RTWLGMALILAG  108 (113)
T ss_pred             HHhHHHHHHHHHHHHHHHH----HHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccc--h----hHHHHHHHHHcC
Confidence            4555544433333333222    23467889999999999999899999999777777543  2    235788888888


Q ss_pred             Hhh
Q 019052          299 TFL  301 (347)
Q Consensus       299 Vvl  301 (347)
                      +.+
T Consensus       109 v~L  111 (113)
T PF10639_consen  109 VAL  111 (113)
T ss_pred             eee
Confidence            865

Many members are annotated as potential transmembrane proteins.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=84.75  E-value=11  Score=35.57  Aligned_cols=112  Identities=19%  Similarity=0.260  Sum_probs=73.1

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhHhhhhhhccC--------------------CcccCC--ccccccc--chhHHHH
Q 019052           13 MSSDNIKGLILALSSSIFIGSSFIVKKKGLKKAGAS--------------------GVRAGF--GGYSYLY--EPLWWVG   68 (347)
Q Consensus        13 ~~s~~~iGv~lal~sa~~~a~G~~lqk~~~~~~~~~--------------------~~~~~~--~~~~~l~--~p~W~~G   68 (347)
                      ......+|+++.++++++.+++-+...|-.++.+.+                    ..+++.  .....+.  ++.-|.=
T Consensus       108 ~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~f~G~~~~~~~~  187 (244)
T PF04142_consen  108 SNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISESGFFHGYSWWVWIV  187 (244)
T ss_pred             ccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccccCCchhhcchHHHHH
Confidence            345678999999999999999999888877664310                    000000  0011222  1222222


Q ss_pred             HHHHHHHHHHHHHHHhhcchhhhhcchhHHHHHHHHHHHHHhccccccchhhHHHH
Q 019052           69 MITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCIL  124 (347)
Q Consensus        69 ~~l~~~g~~~~~~aL~~ap~slv~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~l  124 (347)
                      +++..+|-+.-...+.+++-.+=.=-.+++++.+.+++..+++.+++..-.+|+.+
T Consensus       188 i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~  243 (244)
T PF04142_consen  188 IFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAAL  243 (244)
T ss_pred             HHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheec
Confidence            33345555666666777776666666788999999999999999999887777654

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=82.79  E-value=1.5  Score=36.20  Aligned_cols=47  Identities=26%  Similarity=0.453  Sum_probs=39.3

Q ss_pred             hhcchhHHHHHHHHHHHHHhccccccchhhHHHHHhhcceeEEeecCC
Q 019052           91 VTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPA  138 (347)
Q Consensus        91 v~Pl~~~~lv~~~~la~~~l~E~~~~~~~~G~~li~~G~~liv~~~~~  138 (347)
                      -+.-|.+-++.+++-.+..-|+|.++.|++|..+|.+|+.++ .++|.
T Consensus        60 YAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI-~~~PR  106 (107)
T PF02694_consen   60 YAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAII-LFAPR  106 (107)
T ss_pred             HHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHhe-EecCC
Confidence            345577778888999999999999999999999999998876 44553

; GO: 0016020 membrane

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=81.24  E-value=11  Score=36.64  Aligned_cols=60  Identities=13%  Similarity=0.199  Sum_probs=44.2

Q ss_pred             HhhcccCcceehhhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHhhhccCCCCCC
Q 019052          244 MALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKTKDLGD  310 (347)
Q Consensus       244 ~aL~~~da~~vvP~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~lG~~l~i~GVvlLs~~~~~~~  310 (347)
                      -|+...+++++-|+- +.-.+++.+.+-.+++|..+      ..-..|+++++.|+.++....++++
T Consensus        69 ~Al~~ap~slv~Plg-~~~lv~~~~~a~~~l~e~~~------~~~~~G~~l~i~G~~liv~~~~~~~  128 (300)
T PF05653_consen   69 VALGFAPASLVAPLG-ALSLVFNAVLARFFLGEKLT------RRDIVGCALIILGSVLIVIFAPKEE  128 (300)
T ss_pred             HHHHhhhHHHHHHHH-hhhhhhHHHHhHHHhcccch------HhHHhhHHHHHhhheeeEEeCCCCC
Confidence            477778889999986 44566778888889999765      2335788888999988776555443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	347
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.0 bits (108), Expect = 2e-05
 Identities = 33/209 (15%), Positives = 70/209 (33%), Gaps = 44/209 (21%)

Query: 147 EVWNLATEPAFLLYAALVITAVFILIFHYIPQYGQTHIMVYIGVCSLVG--SLSVMSVKA 204
            V N     AF L   +++T  F  +  ++     THI +     +L      S++  K 
Sbjct: 252 NVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLL-KY 310

Query: 205 IGI--------ALK---LTLSGMNQLI--YPQTWAFTLIVIVCVLTQMNY--LNMALDTF 249
           +           L      LS + + I     TW             +N   L   +++ 
Sbjct: 311 LDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWK--------HVNCDKLTTIIESS 362

Query: 250 NTAVVSPIYYVMFTSLTIL-------ASV--IMFKDWDRQNPTQIVTEMCGFVTILAGTF 300
              +    Y  MF  L++          +  +++ D  + +   +V ++  +        
Sbjct: 363 LNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKY-------S 415

Query: 301 LLHKTKDLGDGSSLTPSMSLRLSKHADDD 329
           L+   K   + +   PS+ L L    +++
Sbjct: 416 LVE--KQPKESTISIPSIYLELKVKLENE 442

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	347
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	99.0
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.86
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	97.62
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	97.59

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=99.00  E-value=1.6e-09  Score=88.57  Aligned_cols=99  Identities=15%  Similarity=0.085  Sum_probs=85.5

Q ss_pred             HHHHHHHHHHHHHHHHhHhhhhhhccCCcccCCcccccccchhHHHHHHHHHHHHHHHHHHHhhcchhhhhcc-hhHHHH
Q 019052           22 ILALSSSIFIGSSFIVKKKGLKKAGASGVRAGFGGYSYLYEPLWWVGMITMVVGEIANFAAYAFAPAILVTPL-GALSII  100 (347)
Q Consensus        22 ~lal~sa~~~a~G~~lqk~~~~~~~~~~~~~~~~~~~~l~~p~W~~G~~l~~~g~~~~~~aL~~ap~slv~Pl-~~~~lv  100 (347)
                      ++-+++.++.+.|+.+.|++..               ..+.+.++.+..++.+++.+...++...|++.+.|+ .+++.+
T Consensus         5 l~l~~a~~~e~~~~~~lK~s~~---------------~~~~~~~~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v   69 (110)
T 3b5d_A            5 IYLGGAILAEVIGTTLMKFSEG---------------FTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIV   69 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhccC---------------cchHHHHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHH
Confidence            4566788899999999998621               112455678888899999999999999999999999 899999


Q ss_pred             HHHHHHHHHhccccccchhhHHHHHhhcceeEEee
Q 019052          101 ISAALAHIILRERLHIFGILGCILCVVGSTTIVLH  135 (347)
Q Consensus       101 ~~~~la~~~l~E~~~~~~~~G~~li~~G~~liv~~  135 (347)
                      ++.+++.+++||+++..+++|+.+++.|++++...
T Consensus        70 ~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           70 LISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999999977543

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.86  E-value=1.8e-09  Score=91.81  Aligned_cols=99  Identities=15%  Similarity=0.085  Sum_probs=69.5

Q ss_pred             HHHHHHHHHHHHHHHHhHhhhhhhccCCcccCCcccccccchhHHHHHHHHHHHHHHHHHHHhhcchhhhhcc-hhHHHH
Q 019052           22 ILALSSSIFIGSSFIVKKKGLKKAGASGVRAGFGGYSYLYEPLWWVGMITMVVGEIANFAAYAFAPAILVTPL-GALSII  100 (347)
Q Consensus        22 ~lal~sa~~~a~G~~lqk~~~~~~~~~~~~~~~~~~~~l~~p~W~~G~~l~~~g~~~~~~aL~~ap~slv~Pl-~~~~lv  100 (347)
                      ++-+++.++.+.|+.+.|++..               ..+.+.++.|++++++++.++..++...|++.+.|+ .+++.+
T Consensus         5 l~Ll~ail~ev~~~~~lK~s~g---------------~~~~~~~~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv   69 (137)
T 2i68_A            5 IYLGGAILAEVIGTTLMKFSEG---------------FTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIV   69 (137)
T ss_dssp             HHHHHHHHHHHHHHHHC---------------------------CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcc---------------cchHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHH
Confidence            4556778899999999998621               112355678899999999999999999999999999 899999


Q ss_pred             HHHHHHHHHhccccccchhhHHHHHhhcceeEEee
Q 019052          101 ISAALAHIILRERLHIFGILGCILCVVGSTTIVLH  135 (347)
Q Consensus       101 ~~~~la~~~l~E~~~~~~~~G~~li~~G~~liv~~  135 (347)
                      ++.+++.+++||+++..+++|+++|++|++++...
T Consensus        70 ~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           70 LISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (137)
T ss_dssp             HHHHHHHHHHC------CHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999999987543

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=97.62  E-value=0.00015  Score=61.36  Aligned_cols=69  Identities=20%  Similarity=0.258  Sum_probs=47.8

Q ss_pred             HHHHHHHHHHHHHhhcccCcceehhhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHhhhccCC
Q 019052          232 IVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKTK  306 (347)
Q Consensus       232 v~~~l~Q~~~ln~aL~~~da~~vvP~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~lG~~l~i~GVvlLs~~~  306 (347)
                      +.+...-.+++++++++.|.+..+|+....-++.+.+.|.++|+|..+      ....+|++++++||+++.+.+
T Consensus        37 i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls------~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLD------LPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCC------HHHHHHHHHHHHHHHHHhcCC
Confidence            334444567789999999999999997788899999999999999764      334688899999999998654

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=97.59  E-value=0.0012  Score=53.30  Aligned_cols=68  Identities=19%  Similarity=0.242  Sum_probs=56.5

Q ss_pred             HHHHHHHHHHHHhhcccCcceehhhHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHhhhccCC
Q 019052          233 VCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKTK  306 (347)
Q Consensus       233 ~~~l~Q~~~ln~aL~~~da~~vvP~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~lG~~l~i~GVvlLs~~~  306 (347)
                      .+...-.+++++++++.|.+..+|+....-++...+.|.++|+|..+      ....+|+.+++.||+++...+
T Consensus        38 ~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s------~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLD------LPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCC------HHHHHHHHHHHHHHHHHhcCC
Confidence            33344456788899999999999998888899999999999999764      345788999999999998754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00