Citrus Sinensis ID: 019056

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340------
Protein Sequence
MSTLCKVSLLTTKSISNSPKFSFSPVIFSIKPITASHKLSTSKNLSLLTSKRRKWVIGSVTEDKEVFPADNKLLKDDKNGLLVNGSEDFEAVSSDDKEVVGDNDKLISRAINATIVLGAGTFAVTRLLTIDHDYWHGWTLYEILRYVPEHNWIAYEQALKANPVLAKMAISGIVYFIGDWIAQCYEGKPLFDFDLQRMFRSGLVGFTLHGSLSHYYYKFCEALFPFQDWWVVPAKVAFDQTVWAAVWNSIYFVVLGFLRFESAANIFSELKSTFWPMLTAGWKLWPFAHLVTYSVIPVEQRLLWVDCVELIWVTILSTYSNEKSEARILEATTEANSDSSSISHEE
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccEEccccccccccccccccHHHHHHccccEEEEcccccccccccccccccccccccEEccccccccccccccccccccHHHHHHHHHHHHHHccccEEEEEEEEEEccccccHHHHHHHHHccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccEEcHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHccccccccEEEEcccccccccccccccccccccccccccEEEEEEEHHHHcccEccccccccccccEEEEEcccccccccccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHEEEcccccccHHHHHHHHHccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccEEccHHEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mstlckvsllttksisnspkfsfspvifsikpitashklstsknlslltskrrkwvigsvtedkevfpadnkllkddkngllvngsedfeavssddkevvgdndKLISRAINATIVLGAGTFAVTRLLTIDHDYWHGWTLYEILRYVPEHNWIAYEQALKANPVLAKMAISGIVYFIGDWIaqcyegkplfdfdlQRMFRSGLVGFTLHGSLSHYYYKFCEAlfpfqdwwvvpakvafDQTVWAAVWNSIYFVVLGFLRFESAANIFSELKStfwpmltagwklwpfahlvtysvipveqrLLWVDCVELIWVTILSTYSNEKSEARILEATteansdsssishee
Flexible Loop (DISEMBL)
mstlckvsllttksisnspkfsfspVIFSIkpitashklstsknlslltskrrkwvigsvtedkevfpadnkllkddkngllVNGSEdfeavssddkevvGDNDKLISRAINATIVLGAGTFAVTRLLTIDHDYWHGWTLYEILRYVPEHNWIAYEQALKANPVLAKMAISGIVYFIGDWIAQCYEGKPLFDFDLQRMFRSGLVGFTLHGSLSHYYYKFCEALFPFQDWWVVPAKVAFDQTVWAAVWNSIYFVVLGFLRFESAANIFSELKSTFWPMLTAGWKLWPFAHLVTYSVIPVEQRLLWVDCVELIWVTILSTYSNEKSEARILEatteansdsssishee
Low Complexity Region (SEG)
MSTLCKVSLLTTKSISNSPKFSFSPVIFSIKPITASHklstsknlslltskrrkWVIGSVTEDKEVFPAdnkllkddkngllvnGSEDFEAVSSDDKEVVGDNDKLISRAINATIVLGAGTFAVTRLLTIDHDYWHGWTLYEILRYVPEHNWIAYEQALKANPVLAKMAISGIVYFIGDWIAQCYEGKPLFDFDLQRMFRSGLVGFTLHGSLSHYYYKFCEALFPFQDWWVVPAKVAFDQTVWAAVWNSIYFVVLGFLRFESAANIFSELKSTFWPMLTAGWKLWPFAHLVTYSVIPVEQRLLWVDCVELIWVTILSTYSNEKSEARILEATTEANSDSSSISHEE
Disordered region (IsUnstruct)
*******SLL*********KFSFSPVIFSIKPITASHKLS**KNLSLLTSKRRKWVIGSVTEDKEVFPA***L*******LL*****************VGDNDKLISRAINATIVLGAGTFAVTRLLTIDHDYWHGWTLYEILRYVPEHNWIAYEQALKANPVLAKMAISGIVYFIGDWIAQCYEGKPLFDFDLQRMFRSGLVGFTLHGSLSHYYYKFCEALFPFQDWWVVPAKVAFDQTVWAAVWNSIYFVVLGFLRFESAANIFSELKSTFWPMLTAGWKLWPFAHLVTYSVIPVEQRLLWVDCVELIWVTILSTY***************************
Disordered Region (DISOPRED)
*****************************************************KWVIGSVT*******************************************KLISRAINATIVLGAGTFAVTRLLTIDHDYWHGWTLYEILRYVPEHNWIAYEQALKANPVLAKMAISGIVYFIGDWIAQCYEGKPLFDFDLQRMFRSGLVGFTLHGSLSHYYYKFCEALFPFQDWWVVPAKVAFDQTVWAAVWNSIYFVVLGFLRFESAANIFSELKSTFWPMLTAGWKLWPFAHLVTYSVIPVEQRLLWVDCVELIWVTILS*****************************
Disordered Region (DISEMBL)
MSTLCKVSLLTTKSISNSPKFSFSPVIFSIKPITASHKLSTSKNLSLLTSKRRKWVIGSVTEDKEVFPADNKLLKDDKNGLLVNGSEDFEAVSSDDKEVVGDNDKLISRAINATIVLGAGTFAVTRLLTIDHDYWHGWTLYEILRYVPEHNWIAYEQALKANPVLAKMAISGIVYFIGDWIAQCYEGKPLFDFDLQRMFRSGLVGFTLHGSLSHYYYKFCEALFPFQDWWVVPAKVAFDQTVWAAVWNSIYFVVLGFLRFESAANIFSELKSTFWPMLTAGWKLWPFAHLVTYSVIPVEQRLLWVDCVELIWVTILSTYSNEKSEARILEA***************
Disordered Region (DISPRO)
**T*CKVSLLTTKSISNSPKFSFSPVIFSI****ASHKLS***NLSLLTSKRRKWVIGSVTEDKEVFPADNKLL*****GLLVNGSEDFE*****D*E*VGDNDKLISRAINATIVLGAGTFAVTRLLTIDHDYWHGWTLYEILRYVPEHNWIAYEQALKANPVLAKMAISGIVYFIGDWIAQCYEGKPLFDFDLQRMFRSGLVGFTLHGSLSHYYYKFCEALFPFQDWWVVPAKVAFDQTVWAAVWNSIYFVVLGFLRFESAANIFSELKSTFWPMLTAGWKLWPFAHLVTYSVIPVEQRLLWVDCVELIWVTILSTYSNE************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSTLCKVSLLTTKSISNSPKFSFSPVIFSIKPITASHKLSTSKNLSLLTSKRRKWVIGSVTEDKEVFPADNKLLKDDKNGLLVNGSEDFEAVSSDDKEVVGDNDKLISRAINATIVLGAGTFAVTRLLTIDHDYWHGWTLYEILRYVPEHNWIAYEQALKANPVLAKMAISGIVYFIGDWIAQCYEGKPLFDFDLQRMFRSGLVGFTLHGSLSHYYYKFCEALFPFQDWWVVPAKVAFDQTVWAAVWNSIYFVVLGFLRFESAANIFSELKSTFWPMLTAGWKLWPFAHLVTYSVIPVEQRLLWVDCVELIWVTILSTYSNEKSEARILEATTEANSDSSSISHEE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	346	2.2.26 [Sep-21-2011]
Q2KIY1	196	Peroxisomal membrane prot	yes	no	0.497	0.877	0.288	3e-17
Q754F0	182	Protein SYM1 OS=Ashbya go	yes	no	0.494	0.939	0.284	1e-15
Q6CIY7	195	Protein SYM1 OS=Kluyverom	yes	no	0.476	0.846	0.292	9e-15
Q07066	194	Peroxisomal membrane prot	yes	no	0.505	0.902	0.269	2e-14
Q68F62	203	Mpv17-like protein OS=Xen	N/A	no	0.5	0.852	0.280	2e-13
Q6CAW5	202	Protein SYM1 OS=Yarrowia	yes	no	0.473	0.811	0.289	2e-13
Q7SCY7	172	Protein sym-1 OS=Neurospo	N/A	no	0.462	0.930	0.271	3e-13
Q9NR77	195	Peroxisomal membrane prot	yes	no	0.497	0.882	0.267	3e-13
Q54FR4	185	PXMP2/4 family protein 4	yes	no	0.471	0.881	0.278	3e-13
Q99MS3	194	Mpv17-like protein OS=Mus	yes	no	0.494	0.881	0.265	4e-12

>sp|Q2KIY1|PXMP2_BOVIN Peroxisomal membrane protein 2 OS=Bos taurus GN=PXMP2 PE=2 SV=3

 Score = 89.7 bits (221), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 89/177 (50%), Gaps = 5/177 (2%)

Query: 147 VPEHNWIAYEQALKANPVLAKMAISGIVYFIGDWIAQCYEGKPLFD-----FDLQRMFRS 201
           +P      Y + L+  PVL K A SGI+  +G+++AQ  E K   +      D+    R 
Sbjct: 17  LPRRALSQYLRLLRLYPVLTKAATSGILSALGNFLAQLIEKKQKKENCSQKLDVSGPLRY 76

Query: 202 GLVGFTLHGSLSHYYYKFCEALFPFQDWWVVPAKVAFDQTVWAAVWNSIYFVVLGFLRFE 261
            + GF   G L H++Y   E   P +       ++  D+ ++A  + S++F+V+ FL  +
Sbjct: 77  AIYGFFFTGPLGHFFYLLMERWIPSEVPLAGIKRLLLDRLLFAPAFLSLFFLVMNFLEGQ 136

Query: 262 SAANIFSELKSTFWPMLTAGWKLWPFAHLVTYSVIPVEQRLLWVDCVELIWVTILST 318
             A   +++KS FWP L   W++W     +  + IPV+ R+L+ + V L W   L++
Sbjct: 137 DTAAFAAKMKSGFWPALRMNWRVWTPVQFININYIPVQFRVLFANLVALFWYAYLAS 193

Seems to be involved in pore-forming activity and may contribute to the unspecific permeability of the peroxisomal membrane.
Bos taurus (taxid: 9913)

>sp|Q754F0|SYM1_ASHGO Protein SYM1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SYM1 PE=3 SV=1

 Score = 84.3 bits (207), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 87/176 (49%), Gaps = 5/176 (2%)

Query: 155 YEQALKANPVLAKMAISGIVYFIGDWIAQCYEGKPLFDFDLQRMFRSGLVGFTLHGSLSH 214
           Y+ +L+++P       +G ++ +GD +AQ    +P   +D  R  R  L G  L   +  
Sbjct: 8   YKASLQSHPKRTNALTTGFLFGLGDIVAQTQFPEPGASYDPMRTLRPFLYGAVLFSLVGD 67

Query: 215 YYYKFCEAL----FPFQDWWVVPAKVAFDQTVWAAVWNSIYFVVLGFLRFESAANIFSEL 270
            +Y+F   +     P   W  V A+VA DQ ++A +   +Y+  +  +   S  ++   L
Sbjct: 68  KWYRFLSTVRLGRLPQAHWANVLARVACDQLIFAPIGVPLYYTAMALMEGGSLEDVRIRL 127

Query: 271 KSTFWPMLTAGWKLWPFAHLVTYSVIPVEQRLLWVDCVELIWVTILSTYSNEKSEA 326
              +W  L A W +WP   L  +S++PV+ RLL V+ + + W T LS YSN  + +
Sbjct: 128 SEKWWSTLLANWIVWPAFQLCNFSLVPVQHRLLTVNVLSIFWNTYLS-YSNSTASS 182

May be involved in cellular response to stress. Required to maintain mitochondrial DNA (mtDNA) integrity and stability.

Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811)

>sp|Q6CIY7|SYM1_KLULA Protein SYM1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SYM1 PE=3 SV=1

 Score = 81.6 bits (200), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 86/171 (50%), Gaps = 6/171 (3%)

Query: 151 NWIAYEQALKANPVLAKMAISGIVYFIGDWIAQC-YEGKPLFDFDLQRMFRSGLVGFTLH 209
           NW  Y  ++K +P L    ++G ++ IGD IAQ  +  K    +DL R  R+ + G  + 
Sbjct: 6   NW--YTASVKRSPRLTNGIMTGSLFGIGDVIAQVGFPEKKGQKYDLARTVRAVVYGSLIF 63

Query: 210 GSLSHYYYKFCEA---LFPFQDWWVVPAKVAFDQTVWAAVWNSIYFVVLGFLRFESAANI 266
             +   +YKF      + P + W    A+V  DQ ++A V   +Y+ V+  L  +S  + 
Sbjct: 64  SIIGDSWYKFLNQKVIVKPGKHWTNTAARVGCDQLLFAPVGIPMYYGVMSILEGKSLVDA 123

Query: 267 FSELKSTFWPMLTAGWKLWPFAHLVTYSVIPVEQRLLWVDCVELIWVTILS 317
             +++  +WP L   W +WP   L+ +S++PV  RL  V+ + + W   LS
Sbjct: 124 KKKIEDNWWPTLVTNWYVWPAFQLINFSLVPVHHRLFSVNIISIFWNAFLS 174

May be involved in cellular response to stress. Required to maintain mitochondrial DNA (mtDNA) integrity and stability.

Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590)

>sp|Q07066|PXMP2_RAT Peroxisomal membrane protein 2 OS=Rattus norvegicus GN=Pxmp2 PE=1 SV=2

 Score = 80.5 bits (197), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 88/178 (49%), Gaps = 3/178 (1%)

Query: 144 LRYVPEHNWIAYEQALKANPVLAKMAISGIVYFIGDWIAQCYEGKPLFD---FDLQRMFR 200
           LR +P+     Y   LK  PV+ K   SGI+  +G+ +AQ  E K   D    ++  + R
Sbjct: 14  LRSLPKRALAQYLLFLKFYPVVTKAVSSGILSALGNLLAQMIEKKQKKDSRSLEVSGLLR 73

Query: 201 SGLVGFTLHGSLSHYYYKFCEALFPFQDWWVVPAKVAFDQTVWAAVWNSIYFVVLGFLRF 260
             + G  + G LSHY Y F E   P +  W    ++  D+  +A  +  ++F V+  L  
Sbjct: 74  YLVYGLFVTGPLSHYLYLFMEYWVPPEVPWARVKRLLLDRLFFAPTFLLLFFFVMNLLEG 133

Query: 261 ESAANIFSELKSTFWPMLTAGWKLWPFAHLVTYSVIPVEQRLLWVDCVELIWVTILST 318
           ++ +   ++++S FWP L   W++W     +  + +P++ R+L+ +   L W   L++
Sbjct: 134 KNISVFVAKMRSGFWPALQMNWRMWTPLQFININYVPLQFRVLFANMAALFWYAYLAS 191

Seems to be involved in pore-forming activity and may contribute to the unspecific permeability of the peroxisomal membrane.

Rattus norvegicus (taxid: 10116)

>sp|Q68F62|MP17L_XENLA Mpv17-like protein OS=Xenopus laevis GN=mpv17l PE=2 SV=1

 Score = 77.0 bits (188), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 77/178 (43%), Gaps = 5/178 (2%)

Query: 157 QALKANPVLAKMAISGIVYFIGDWIAQCYEGKPLFDFDLQRMFRSGLVGFTLHGSLSHYY 216
           Q  K +P L  + I G ++   D + Q     P    D ++  + GLVGF  H + + ++
Sbjct: 6   QFTKRHPWLTNVTIYGSLFASADIVQQKLSKSPTEPIDFKQTAKVGLVGFCFHANFNFFW 65

Query: 217 YKFCEALFPFQDWWVVPAKVAFDQTVWAAVWNSIYFVVLGFLRFESAANIFSELKSTFWP 276
            +F E  FP      V  KVA DQ + A +  S ++  L  L  +   ++F  LK  FWP
Sbjct: 66  LRFIERTFPGSAPLNVIRKVACDQLMAAPITISAFYTGLSLL--DGERDVFKNLKEKFWP 123

Query: 277 MLTAGWKLWPFAHLVTYSVIPVEQRLLWVDCVELIWVTILSTYSNE---KSEARILEA 331
               G   W     + +SVIP   R  ++     +W T L    N    +   R+L A
Sbjct: 124 TYKTGVMCWTVFQTINFSVIPPFVRTAYIGVCAFLWTTFLCYIRNRDINEVTTRLLHA 181

Participates in reactive oxygen species metablism.

Xenopus laevis (taxid: 8355)

>sp|Q6CAW5|SYM1_YARLI Protein SYM1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SYM1 PE=3 SV=1

 Score = 77.0 bits (188), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 12/176 (6%)

Query: 151 NWIAYEQALKANPVLAKMAISGIVYFIGDWIAQCY-EGKPLFDFDLQRMFRSGLVGFTLH 209
           NW  Y + L+  P    +  +  ++ IGD ++Q Y   KP   ++  R  R+G+      
Sbjct: 2   NW--YVRLLQKYPYRMAVTSTSSLFMIGDCVSQRYFSDKP---YEPMRTARAGIYACAFA 56

Query: 210 GSLSHYYYKFCEALFPFQDWWVVPAKVAFDQTVWAAVWNSIYFVVLGFLRFESAANIFSE 269
            +++ ++    +   P      V AKVA DQ V+A      YF V+G L  +S   I+  
Sbjct: 57  PAMTAWFRFLGQQQLP------VIAKVAIDQAVFAPSSIGYYFSVMGLLEGKSPDTIWQS 110

Query: 270 LKSTFWPMLTAGWKLWPFAHLVTYSVIPVEQRLLWVDCVELIWVTILSTYSNEKSE 325
           LK+ +W  L  GW +WP   L  + ++P   R+L  +C  L+W T L+  +  K E
Sbjct: 111 LKNQYWDTLKCGWMIWPAFQLFNFGIVPPNFRVLASNCCGLVWNTFLAYQNANKME 166

May be involved in cellular response to stress. Required to maintain mitochondrial DNA (mtDNA) integrity and stability.

Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591)

>sp|Q7SCY7|SYM1_NEUCR Protein sym-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=sym-1 PE=3 SV=2

 Score = 76.6 bits (187), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 86/166 (51%), Gaps = 6/166 (3%)

Query: 155 YEQALKANPVLAKMAISGIVYFIGDWIAQ-CYEGKPLFDFDLQRMFRSGLVGFTLHGSLS 213
           Y+  L A P+L +   + I++ +GD  AQ   + + L + DL R  R  L G  + G  +
Sbjct: 5   YKAQLAARPLLTQAVTTSILFGVGDVAAQQLVDRRGLSNHDLTRTGRMVLYGGAVFGPAA 64

Query: 214 HYYYKFCE--ALFPFQDWWVVPAKVAFDQTVWAAVWNSIYFVVLGFLRFESAANIFSELK 271
             +++F +   + P      + A+VA DQ ++A  +  I+   LG +      ++  +L+
Sbjct: 65  TTWFRFLQKRVVVPGSTNKTILARVAADQGLFAPTFIGIF---LGSMAVLEGTDVKEKLQ 121

Query: 272 STFWPMLTAGWKLWPFAHLVTYSVIPVEQRLLWVDCVELIWVTILS 317
             +W  L+  W +WPF  +V + V+P++ R+L+V+ + + W   LS
Sbjct: 122 KNYWEALSTNWMVWPFVQMVNFKVVPLDHRVLFVNVISIGWNCYLS 167

May be involved in cellular response to stress. Required to maintain mitochondrial DNA (mtDNA) integrity and stability.

Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110)

>sp|Q9NR77|PXMP2_HUMAN Peroxisomal membrane protein 2 OS=Homo sapiens GN=PXMP2 PE=1 SV=3

 Score = 76.3 bits (186), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 88/176 (50%), Gaps = 4/176 (2%)

Query: 147 VPEHNWIAYEQALKANPVLAKMAISGIVYFIGDWIAQCYEGKPLFD----FDLQRMFRSG 202
           +P      Y   L+  PVL K A SGI+  +G+++AQ  E K   +     D+    R  
Sbjct: 17  LPRRALAQYLLFLRLYPVLTKAATSGILSALGNFLAQMIEKKRKKENSRSLDVGGPLRYA 76

Query: 203 LVGFTLHGSLSHYYYKFCEALFPFQDWWVVPAKVAFDQTVWAAVWNSIYFVVLGFLRFES 262
           + GF   G LSH++Y F E   P +       ++  D+ V+A  +  ++F+++ FL  + 
Sbjct: 77  VYGFFFTGPLSHFFYFFMEHWIPPEVPLAGLRRLLLDRLVFAPAFLMLFFLIMNFLEGKD 136

Query: 263 AANIFSELKSTFWPMLTAGWKLWPFAHLVTYSVIPVEQRLLWVDCVELIWVTILST 318
           A+   ++++  FWP L   W++W     +  + +P++ R+L+ +   L W   L++
Sbjct: 137 ASAFAAKMRGGFWPALRMNWRVWTPLQFININYVPLKFRVLFANLAALFWYAYLAS 192

Seems to be involved in pore-forming activity and may contribute to the unspecific permeability of the peroxisomal membrane.

Homo sapiens (taxid: 9606)

>sp|Q54FR4|PX24D_DICDI PXMP2/4 family protein 4 OS=Dictyostelium discoideum GN=DDB_G0290631 PE=3 SV=1

 Score = 76.3 bits (186), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 79/165 (47%), Gaps = 2/165 (1%)

Query: 155 YEQALKANPVLAKMAISGIVYFIGDWIAQCYEGKPLFD--FDLQRMFRSGLVGFTLHGSL 212
           Y   L   PV  K   SG +Y I D + Q  E     D  +D +R  R  + GF + G L
Sbjct: 15  YLSQLHKYPVATKAVTSGFLYLISDSLVQGIELSRDKDKKYDFKRSMRMAVFGFAVTGPL 74

Query: 213 SHYYYKFCEALFPFQDWWVVPAKVAFDQTVWAAVWNSIYFVVLGFLRFESAANIFSELKS 272
            HY++K+ +  FP + +     K+  DQ V + V+N ++F  +G L  +S  +I  +LK 
Sbjct: 75  FHYWFKYLDKHFPKKSYRHAFIKLTIDQVVCSPVFNFLFFSGMGILEGKSKDDIVEKLKK 134

Query: 273 TFWPMLTAGWKLWPFAHLVTYSVIPVEQRLLWVDCVELIWVTILS 317
            +     +   +WPF + V ++ I    R+ +++   + W   L+
Sbjct: 135 DWLTTYVSDCVVWPFINFVNFAYISSIHRVTFMNVCNIGWGAFLA 179

Dictyostelium discoideum (taxid: 44689)

>sp|Q99MS3|MP17L_MOUSE Mpv17-like protein OS=Mus musculus GN=Mpv17l PE=1 SV=2

 Score = 72.4 bits (176), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 6/177 (3%)

Query: 152 WIAYEQALKANPVLAKMAISGIVYFIGDWIAQCYEGKPLFDFDLQRMFRSGLVGFTLHGS 211
           W A+ QA +  P    + +   ++  GD + Q   G P    D ++  R   +  T HG+
Sbjct: 5   WRAFPQAARRYPWPTNVLLYAGLFSAGDALQQRLRGGPA---DWRQTRRVATLAVTFHGN 61

Query: 212 LSHYYYKFCEALFPFQDWWVVPAKVAFDQTVWAAVWNSIYFVVLGFLRFESAANIFSELK 271
            ++ + +  E   P +    V AKV  DQTV   +  S ++V +  L  +   +IF +LK
Sbjct: 62  FNYVWLRLLERALPGRAPRTVLAKVLCDQTVGGPIALSAFYVGMSVL--QGKDDIFLDLK 119

Query: 272 STFWPMLTAGWKLWPFAHLVTYSVIPVEQRLLWVDCVELIWVTILSTYSNEKSEARI 328
             FW    +G   WPF  L  +S++PV  R  +      +W T L  +S +  +  +
Sbjct: 120 QKFWNTYKSGLMYWPFVQLTNFSLVPVHWRTAYTGLCAFLWATFL-CFSQQSGDGTL 175

Isoform 1 and isoform 3 participate in reactive oxygen species metablism by up- or down-regulation of the genes of antioxidant enzymes.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	346
255553843	344	Peroxisomal membrane protein, putative [	0.933	0.938	0.741	1e-140
297739256	357	unnamed protein product [Vitis vinifera]	0.881	0.854	0.716	1e-126
449438482	353	PREDICTED: uncharacterized protein LOC10	0.916	0.898	0.664	1e-121
225461355	371	PREDICTED: uncharacterized protein LOC10	0.973	0.908	0.580	1e-120
297813963	341	hypothetical protein ARALYDRAFT_490222 [	0.838	0.850	0.669	1e-120
449479176	375	PREDICTED: uncharacterized protein LOC10	0.916	0.845	0.658	1e-120
42572817	361	Peroxisomal membrane 22 kDa (Mpv17/PMP22	0.849	0.814	0.669	1e-120
356549942	322	PREDICTED: peroxisomal membrane protein	0.812	0.872	0.732	1e-119
42566274	317	Peroxisomal membrane 22 kDa (Mpv17/PMP22	0.826	0.902	0.680	1e-119
224127023	238	predicted protein [Populus trichocarpa]	0.684	0.995	0.856	1e-119

>gi|255553843|ref|XP_002517962.1| Peroxisomal membrane protein, putative [Ricinus communis] gi|223542944|gb|EEF44480.1| Peroxisomal membrane protein, putative [Ricinus communis]

 Score =  502 bits (1293), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 244/329 (74%), Positives = 274/329 (83%), Gaps = 6/329 (1%)

Query: 23  FSPVIFSIKPITASHKLSTSKNLSLLTSKRRKWVIGSVTEDKEVFPADNKLLKDDKNGLL 82
            +P+  S +P ++S  LST+K  S      ++W IGSVTED+EV P  +   K   N L 
Sbjct: 13  LTPIRQSHQPNSSSLLLSTAKPKSSKNKYTKRWAIGSVTEDREVAPVKDSTSKYQGNPLF 72

Query: 83  VNGSEDFEAVSSDDKEVVG-----DNDKLISRAINATIVLGAGTFAVTRLLTIDHDYWHG 137
           VNGS+DFEA+ S   E  G     D +KL++RAINA+IVLG GT AV++LLTIDHDYWHG
Sbjct: 73  VNGSKDFEALPSSSVEEKGGGDNNDKEKLMTRAINASIVLGFGTLAVSKLLTIDHDYWHG 132

Query: 138 WTLYEILRYVPEHNWIAYEQALKANPVLAKMAISGIVYFIGDWIAQCYEGKPLFDFDLQR 197
           WTLYE+LRYVPEHNWIAYEQALK+NPVL KMAISGIVY IGDWIAQCYEGKP+F+FD  R
Sbjct: 133 WTLYEVLRYVPEHNWIAYEQALKSNPVLTKMAISGIVYSIGDWIAQCYEGKPIFEFDRTR 192

Query: 198 MFRSGLVGFTLHGSLSHYYYKFCEALFPFQDWWVVPAKVAFDQTVWAAVWNSIYFVVLGF 257
           MFRSGLVGFTLHGSLSHYYY+FCEALFPF+DWWVVPAKVAFDQTVWAA+WNSIYF+VLGF
Sbjct: 193 MFRSGLVGFTLHGSLSHYYYQFCEALFPFEDWWVVPAKVAFDQTVWAAIWNSIYFLVLGF 252

Query: 258 LRFESAANIFSELKSTFWPMLTAGWKLWPFAHLVTYSVIPVEQRLLWVDCVELIWVTILS 317
           LRFES ANIFSEL +TFWPMLTAGWKLWPF+HL+TY VIPVEQRLLWVDCVELIWVTILS
Sbjct: 253 LRFESPANIFSELTATFWPMLTAGWKLWPFSHLITYGVIPVEQRLLWVDCVELIWVTILS 312

Query: 318 TYSNEKSEARILEATTEANSDSSSISHEE 346
           TYSNEKSEAR  EAT EA S SSS +H E
Sbjct: 313 TYSNEKSEARTSEATIEATSKSSS-NHTE 340

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297739256|emb|CBI28907.3| unnamed protein product [Vitis vinifera]

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 225/314 (71%), Positives = 254/314 (80%), Gaps = 9/314 (2%)

Query: 37  HKLSTSKNLSLLTSKRRKWVIGSVTEDKEVFPADNKLLKDDKNGLL----VNGSEDFEAV 92
           +K + S N +    KR  WVI +V ED+++ PA     K  ++  L    ++GSED E +
Sbjct: 40  NKSNPSLNSTFSKKKRLNWVINAVAEDQDLAPAQTSGSKVHQDEDLPRSSLDGSEDSEGL 99

Query: 93  SSDDK--EVVGDN---DKLISRAINATIVLGAGTFAVTRLLTIDHDYWHGWTLYEILRYV 147
           SS     +  GDN   D+L S+ INATIVL  GT A+TRLLTIDHDYWHGWTLYE+LRY 
Sbjct: 100 SSSSVSSQGKGDNYEFDRLRSKTINATIVLAGGTLAITRLLTIDHDYWHGWTLYEVLRYA 159

Query: 148 PEHNWIAYEQALKANPVLAKMAISGIVYFIGDWIAQCYEGKPLFDFDLQRMFRSGLVGFT 207
           PEHNW+AYE+ALK NPVLAKMAISG VY IGDWIAQCYEGKPLF+FDL RM RSGLVGF+
Sbjct: 160 PEHNWVAYEEALKTNPVLAKMAISGAVYSIGDWIAQCYEGKPLFEFDLTRMLRSGLVGFS 219

Query: 208 LHGSLSHYYYKFCEALFPFQDWWVVPAKVAFDQTVWAAVWNSIYFVVLGFLRFESAANIF 267
           LHGSLSHYYY+FCEALFP +DWWVVPAKV  DQTVWAA+WNSIY+V LGFLR ES ANI+
Sbjct: 220 LHGSLSHYYYQFCEALFPSKDWWVVPAKVVVDQTVWAAIWNSIYYVALGFLRRESPANIY 279

Query: 268 SELKSTFWPMLTAGWKLWPFAHLVTYSVIPVEQRLLWVDCVELIWVTILSTYSNEKSEAR 327
            E+KSTFWPMLTAGWKLWPFAHL+TY VIPVEQRLLWVDCVELIWVTILSTYSNEKSEAR
Sbjct: 280 GEVKSTFWPMLTAGWKLWPFAHLITYGVIPVEQRLLWVDCVELIWVTILSTYSNEKSEAR 339

Query: 328 ILEATTEANSDSSS 341
           I EAT EANS SS+
Sbjct: 340 ITEATQEANSRSSN 353

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449438482|ref|XP_004137017.1| PREDICTED: uncharacterized protein LOC101214701 [Cucumis sativus]

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 216/325 (66%), Positives = 254/325 (78%), Gaps = 8/325 (2%)

Query: 25  PVIFSIKPIT-ASHKLSTSKNLSLLTSKRRKWVIGSVTEDKEVFPADNKLLKDDKNGLLV 83
           P + S+   T +S K   S NL L T +RR+W + SV ED+E+   +    +D+++ L +
Sbjct: 21  PHLISVVHFTKSSRKFDPSDNLILSTVRRRRWGVRSVREDQELVGLEENRSEDEEHSLSL 80

Query: 84  NGSEDFEAVSSDDKEVVGDN---DKLI----SRAINATIVLGAGTFAVTRLLTIDHDYWH 136
           +GSE  EA SS       ++   D+++     RA+NATIVLG GT  VT+LLTIDH+ WH
Sbjct: 81  DGSEKIEAYSSSSSSSFSEDNGADEVLKGFSGRAVNATIVLGFGTLLVTKLLTIDHELWH 140

Query: 137 GWTLYEILRYVPEHNWIAYEQALKANPVLAKMAISGIVYFIGDWIAQCYEGKPLFDFDLQ 196
           GWTLYE+LRY PEHNWIAYE+ALK NPVLAKM ISGIVYF+GDWIAQCYEGKPLF+FD  
Sbjct: 141 GWTLYEVLRYAPEHNWIAYEEALKTNPVLAKMMISGIVYFLGDWIAQCYEGKPLFEFDRA 200

Query: 197 RMFRSGLVGFTLHGSLSHYYYKFCEALFPFQDWWVVPAKVAFDQTVWAAVWNSIYFVVLG 256
           RMFRSGLVGF+LHGSLSHYYY+FCE LFPF+DWWVV  KVAFDQTVW+ VWNSIY+VVLG
Sbjct: 201 RMFRSGLVGFSLHGSLSHYYYQFCEILFPFKDWWVVLVKVAFDQTVWSGVWNSIYYVVLG 260

Query: 257 FLRFESAANIFSELKSTFWPMLTAGWKLWPFAHLVTYSVIPVEQRLLWVDCVELIWVTIL 316
            LR ES  +I+ ELKSTFWPMLTAGWKLWPFAHL+TY V+PVEQRLLWVD VELIWVTIL
Sbjct: 261 ILRSESMTDIYGELKSTFWPMLTAGWKLWPFAHLITYGVVPVEQRLLWVDSVELIWVTIL 320

Query: 317 STYSNEKSEARILEATTEANSDSSS 341
           STYSNEKSE RI +A+T  N  S S
Sbjct: 321 STYSNEKSEERISDASTGENEASPS 345

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225461355|ref|XP_002284644.1| PREDICTED: uncharacterized protein LOC100253839 [Vitis vinifera]

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 220/379 (58%), Positives = 267/379 (70%), Gaps = 42/379 (11%)

Query: 1   MSTLCKVSLLTTKSISNSPKFSFSPVIFSIKPITASHKLSTSKNLSLLTSKRRKWVIGSV 60
           M+ + +  L  TK  +  PK    P IF  K +  +  + +  N       R++WV+ +V
Sbjct: 1   MAFVTQRFLPITKPFTE-PKSKPRPTIFLPKGLPQTSGIFSGTN-------RKRWVV-AV 51

Query: 61  TEDKEVFPADNKLLKDDKNGLLVN-------------------------GSEDFEA---- 91
            E+ +V P  +    D ++G+L                           G+ +F+     
Sbjct: 52  AEELDVIPVQSSDSTDQQDGVLARIEVEEEGELVNQVGGFSGEGRFSFEGAGEFQGFSSS 111

Query: 92  ----VSSDDKEVVGDNDKLISRAINATIVLGAGTFAVTRLLTIDHDYWHGWTLYEILRYV 147
                SS+ +    D ++LI R+INATIVL AG+FAVT+LLTID DYWHGWT++EILRY 
Sbjct: 112 SSSSTSSEGQGEAEDVERLIDRSINATIVLAAGSFAVTKLLTIDADYWHGWTIFEILRYA 171

Query: 148 PEHNWIAYEQALKANPVLAKMAISGIVYFIGDWIAQCYEGKPLFDFDLQRMFRSGLVGFT 207
           P+HNW AYE+ALK NPV AKM ISG+VY +GDWIAQCYEGKPLF+FD  RM RSGLVGFT
Sbjct: 172 PQHNWSAYEEALKTNPVFAKMVISGVVYSLGDWIAQCYEGKPLFEFDRARMLRSGLVGFT 231

Query: 208 LHGSLSHYYYKFCEALFPFQDWWVVPAKVAFDQTVWAAVWNSIYFVVLGFLRFESAANIF 267
           LHGSLSHYYY+FCEALFPFQDWWVVPAKVAFDQT+WAAVWNSIY+ V+GFLRF+S AN+F
Sbjct: 232 LHGSLSHYYYQFCEALFPFQDWWVVPAKVAFDQTLWAAVWNSIYYTVVGFLRFDSPANVF 291

Query: 268 SELKSTFWPMLTAGWKLWPFAHLVTYSVIPVEQRLLWVDCVELIWVTILSTYSNEKSEAR 327
            EL++TFWPMLTAGWKLWPFAHL+TY VIPVEQRLLWVDCVELIWVTILSTYSNEKSEAR
Sbjct: 292 GELRATFWPMLTAGWKLWPFAHLITYGVIPVEQRLLWVDCVELIWVTILSTYSNEKSEAR 351

Query: 328 ILEATTEANSDSSSISHEE 346
           + EA+ EA S+S      E
Sbjct: 352 VSEASAEAASNSPPTGSPE 370

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297813963|ref|XP_002874865.1| hypothetical protein ARALYDRAFT_490222 [Arabidopsis lyrata subsp. lyrata] gi|297320702|gb|EFH51124.1| hypothetical protein ARALYDRAFT_490222 [Arabidopsis lyrata subsp. lyrata]

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 209/312 (66%), Positives = 243/312 (77%), Gaps = 22/312 (7%)

Query: 30  IKPITASHKLSTSKNLSLLTSKRRKWVIGSVTEDKEVFPADNKLLKDDKNGLLVNGSEDF 89
           IK      +++  KN   L ++RR  ++ S+ ED+E     N               E+F
Sbjct: 20  IKTACQLPRINPFKNRKRLITERRNLIVKSIIEDREAVDVKN---------------ENF 64

Query: 90  EAVSSDDKEVVGDNDKLISRAINATIVLGAGTFAVTRLLTIDHDYWHGWTLYEILRYVPE 149
           +     ++E   D D+L+SR INA IVL AGT AVT+LLTIDHDYW GWTLYEILRY PE
Sbjct: 65  KP----EEEQTEDTDQLMSRGINAAIVLAAGTVAVTKLLTIDHDYWQGWTLYEILRYAPE 120

Query: 150 HNWIAYEQALKANPVLAKMAISGIVYFIGDWIAQCYEGKPLFDFDLQRMFRSGLVGFTLH 209
           HNW+AYEQ LK NPVLAKMAISGIVY +GDWIAQCYEGKPLF+FD  R+ RSGLVGFTLH
Sbjct: 121 HNWVAYEQILKTNPVLAKMAISGIVYSLGDWIAQCYEGKPLFEFDRARVLRSGLVGFTLH 180

Query: 210 GSLSHYYYKFCEALFPFQDWWVVPAKVAFDQTVWAAVWNSIYFVVLGFLRFESAANIFSE 269
           GSLSHYYY+FCEALFPFQ+WWVVPAKVAFDQT+W+A+WNSIYF VLG LRF+S A+IFSE
Sbjct: 181 GSLSHYYYQFCEALFPFQEWWVVPAKVAFDQTIWSAIWNSIYFTVLGLLRFQSPADIFSE 240

Query: 270 LKSTFWPMLTAGWKLWPFAHLVTYSVIPVEQRLLWVDCVELIWVTILSTYSNEKSEARIL 329
           +K+TFWPMLTAGWKLWP AHLVTY VIPV+QRLLWVDC+ELIWVTILSTYSNEK+EA   
Sbjct: 241 IKTTFWPMLTAGWKLWPLAHLVTYGVIPVDQRLLWVDCIELIWVTILSTYSNEKAEA--- 297

Query: 330 EATTEANSDSSS 341
           +A+ E NS S S
Sbjct: 298 QASGETNSSSHS 309

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449479176|ref|XP_004155526.1| PREDICTED: uncharacterized protein LOC101223761 [Cucumis sativus]

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 214/325 (65%), Positives = 253/325 (77%), Gaps = 8/325 (2%)

Query: 25  PVIFSIKPIT-ASHKLSTSKNLSLLTSKRRKWVIGSVTEDKEVFPADNKLLKDDKNGLLV 83
           P + S+   T +S K   S NL L T +RR+W + SV ED+E+   +    +D+++ L +
Sbjct: 21  PHLISVVHFTKSSRKFDPSDNLILSTVRRRRWGVRSVREDQELVGLEENRSEDEEHSLSL 80

Query: 84  NGSEDFEAVSSDDKEVVGDN---DKLI----SRAINATIVLGAGTFAVTRLLTIDHDYWH 136
           +GSE  EA SS       ++   D+++     RA+NATIVLG GT  VT+LLTIDH+ WH
Sbjct: 81  DGSEKIEAYSSSSSSSFSEDNGADEVLKGFSGRAVNATIVLGFGTLLVTKLLTIDHELWH 140

Query: 137 GWTLYEILRYVPEHNWIAYEQALKANPVLAKMAISGIVYFIGDWIAQCYEGKPLFDFDLQ 196
           GWTLYE+LRY PEHNWIAYE+ALK NPVLAKM ISGIVYF+GDWIAQCYEGKPLF+FD  
Sbjct: 141 GWTLYEVLRYAPEHNWIAYEEALKTNPVLAKMMISGIVYFLGDWIAQCYEGKPLFEFDRA 200

Query: 197 RMFRSGLVGFTLHGSLSHYYYKFCEALFPFQDWWVVPAKVAFDQTVWAAVWNSIYFVVLG 256
           RMFRSGLVGF+LHGSLSHYYY+FCE LFPF+DWWVV  KVAFDQTVW+ VWNSIY+VVLG
Sbjct: 201 RMFRSGLVGFSLHGSLSHYYYQFCEILFPFKDWWVVLVKVAFDQTVWSGVWNSIYYVVLG 260

Query: 257 FLRFESAANIFSELKSTFWPMLTAGWKLWPFAHLVTYSVIPVEQRLLWVDCVELIWVTIL 316
            LR ES  +I+ ELKSTFWPMLTAGWKLWPFAHL+TY V+PVEQRLLWVD VELIWVTIL
Sbjct: 261 ILRSESMTDIYGELKSTFWPMLTAGWKLWPFAHLITYGVVPVEQRLLWVDSVELIWVTIL 320

Query: 317 STYSNEKSEARILEATTEANSDSSS 341
           ST+ NEKSE RI +A+T  N  S S
Sbjct: 321 STFQNEKSEERISDASTGENEASPS 345

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42572817|ref|NP_974505.1| Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein [Arabidopsis thaliana] gi|332656916|gb|AEE82316.1| Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein [Arabidopsis thaliana]

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 209/312 (66%), Positives = 242/312 (77%), Gaps = 18/312 (5%)

Query: 30  IKPITASHKLSTSKNLSLLTSKRRKWVIGSVTEDKEVFPADNKLLKDDKNGLLVNGSEDF 89
           IK      +++  KN   L ++RR  ++ S+ ED+E     N               ++F
Sbjct: 21  IKTAGPLPRINPFKNQKRLITERRNLIVKSIIEDREAIDVKN---------------DNF 65

Query: 90  EAVSSDDKEVVGDNDKLISRAINATIVLGAGTFAVTRLLTIDHDYWHGWTLYEILRYVPE 149
           +A     ++ V D D+L+SR INA IVL AGT AVT+LLTIDHDYW GWTLYEILRY PE
Sbjct: 66  KAEEELSEDKVEDTDRLMSRGINAAIVLAAGTVAVTKLLTIDHDYWQGWTLYEILRYAPE 125

Query: 150 HNWIAYEQALKANPVLAKMAISGIVYFIGDWIAQCYEGKPLFDFDLQRMFRSGLVGFTLH 209
           HNW AYEQ LK NPVLAKMAISGIVY +GDWIAQCYEGKPLF+FD  R+ RSGLVGFTLH
Sbjct: 126 HNWFAYEQILKTNPVLAKMAISGIVYSLGDWIAQCYEGKPLFEFDRTRVLRSGLVGFTLH 185

Query: 210 GSLSHYYYKFCEALFPFQDWWVVPAKVAFDQTVWAAVWNSIYFVVLGFLRFESAANIFSE 269
           GSLSHYYY+FCEALFPFQ+WWVVPAKVAFDQTVW+A+WNSIYF VLG LRF+S A+IFSE
Sbjct: 186 GSLSHYYYQFCEALFPFQEWWVVPAKVAFDQTVWSAIWNSIYFTVLGLLRFQSPADIFSE 245

Query: 270 LKSTFWPMLTAGWKLWPFAHLVTYSVIPVEQRLLWVDCVELIWVTILSTYSNEKSEARIL 329
           +K+TF PMLTAGWKLWP AHLVTY VIPV+QRLLWVDC+ELIWVTILSTYSNEK+EA   
Sbjct: 246 IKTTFLPMLTAGWKLWPLAHLVTYGVIPVDQRLLWVDCIELIWVTILSTYSNEKAEA--- 302

Query: 330 EATTEANSDSSS 341
           +A+ E NS S S
Sbjct: 303 QASEETNSSSHS 314

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356549942|ref|XP_003543349.1| PREDICTED: peroxisomal membrane protein 2-like [Glycine max]

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 211/288 (73%), Positives = 234/288 (81%), Gaps = 7/288 (2%)

Query: 45  LSLLTSKR-RKWVIGSVTEDKEVFPADNKLLKDDKNGLLVNGSEDFEAVSSDDKEVVGDN 103
           LS  T KR R  +I SV ED+E+ P        +  G+ +N  + F+      +  V   
Sbjct: 26  LSCRTQKRSRVSIITSVAEDREIVPVS------EDRGIRLNEVDGFQPSEPHTESDVVVP 79

Query: 104 DKLISRAINATIVLGAGTFAVTRLLTIDHDYWHGWTLYEILRYVPEHNWIAYEQALKANP 163
               S  +NA IVLG GTFAVT+LLTIDHDYWHGWTL+EI+RY+PEHNWIAYEQALKANP
Sbjct: 80  RLTSSSTVNAIIVLGFGTFAVTKLLTIDHDYWHGWTLFEIVRYIPEHNWIAYEQALKANP 139

Query: 164 VLAKMAISGIVYFIGDWIAQCYEGKPLFDFDLQRMFRSGLVGFTLHGSLSHYYYKFCEAL 223
           VLAKMAISGIVY IGDWIAQCYEGKPLF+FD  R+ RSGLVGFTLHGSLSHYYY+ CEAL
Sbjct: 140 VLAKMAISGIVYSIGDWIAQCYEGKPLFEFDRTRVLRSGLVGFTLHGSLSHYYYQLCEAL 199

Query: 224 FPFQDWWVVPAKVAFDQTVWAAVWNSIYFVVLGFLRFESAANIFSELKSTFWPMLTAGWK 283
           FPFQ+WWVVPAKVAFDQTVW+A+WNSIYFVVLG LRFES  NI+ ELKSTF P+LTAGWK
Sbjct: 200 FPFQEWWVVPAKVAFDQTVWSAIWNSIYFVVLGLLRFESLTNIYGELKSTFLPLLTAGWK 259

Query: 284 LWPFAHLVTYSVIPVEQRLLWVDCVELIWVTILSTYSNEKSEARILEA 331
           LWPFAHL+TY VIPVEQRLLWVDCVELIWVTILSTYSNEKSEARI EA
Sbjct: 260 LWPFAHLITYGVIPVEQRLLWVDCVELIWVTILSTYSNEKSEARISEA 307

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42566274|ref|NP_192250.2| Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein [Arabidopsis thaliana] gi|53828633|gb|AAU94426.1| At4g03410 [Arabidopsis thaliana] gi|332656915|gb|AEE82315.1| Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein [Arabidopsis thaliana]

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 207/304 (68%), Positives = 240/304 (78%), Gaps = 18/304 (5%)

Query: 38  KLSTSKNLSLLTSKRRKWVIGSVTEDKEVFPADNKLLKDDKNGLLVNGSEDFEAVSSDDK 97
           +++  KN   L ++RR  ++ S+ ED+E     N               ++F+A     +
Sbjct: 29  RINPFKNQKRLITERRNLIVKSIIEDREAIDVKN---------------DNFKAEEELSE 73

Query: 98  EVVGDNDKLISRAINATIVLGAGTFAVTRLLTIDHDYWHGWTLYEILRYVPEHNWIAYEQ 157
           + V D D+L+SR INA IVL AGT AVT+LLTIDHDYW GWTLYEILRY PEHNW AYEQ
Sbjct: 74  DKVEDTDRLMSRGINAAIVLAAGTVAVTKLLTIDHDYWQGWTLYEILRYAPEHNWFAYEQ 133

Query: 158 ALKANPVLAKMAISGIVYFIGDWIAQCYEGKPLFDFDLQRMFRSGLVGFTLHGSLSHYYY 217
            LK NPVLAKMAISGIVY +GDWIAQCYEGKPLF+FD  R+ RSGLVGFTLHGSLSHYYY
Sbjct: 134 ILKTNPVLAKMAISGIVYSLGDWIAQCYEGKPLFEFDRTRVLRSGLVGFTLHGSLSHYYY 193

Query: 218 KFCEALFPFQDWWVVPAKVAFDQTVWAAVWNSIYFVVLGFLRFESAANIFSELKSTFWPM 277
           +FCEALFPFQ+WWVVPAKVAFDQTVW+A+WNSIYF VLG LRF+S A+IFSE+K+TF PM
Sbjct: 194 QFCEALFPFQEWWVVPAKVAFDQTVWSAIWNSIYFTVLGLLRFQSPADIFSEIKTTFLPM 253

Query: 278 LTAGWKLWPFAHLVTYSVIPVEQRLLWVDCVELIWVTILSTYSNEKSEARILEATTEANS 337
           LTAGWKLWP AHLVTY VIPV+QRLLWVDC+ELIWVTILSTYSNEK+EA   +A+ E NS
Sbjct: 254 LTAGWKLWPLAHLVTYGVIPVDQRLLWVDCIELIWVTILSTYSNEKAEA---QASEETNS 310

Query: 338 DSSS 341
            S S
Sbjct: 311 SSHS 314

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127023|ref|XP_002329364.1| predicted protein [Populus trichocarpa] gi|222870414|gb|EEF07545.1| predicted protein [Populus trichocarpa]

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 203/237 (85%), Positives = 219/237 (92%)

Query: 105 KLISRAINATIVLGAGTFAVTRLLTIDHDYWHGWTLYEILRYVPEHNWIAYEQALKANPV 164
           ++ SRAINATIVLG GT AV+RLLTIDHDYWHGWTLYEILRY+PEHNWIAYEQALKANPV
Sbjct: 1   RMTSRAINATIVLGFGTLAVSRLLTIDHDYWHGWTLYEILRYLPEHNWIAYEQALKANPV 60

Query: 165 LAKMAISGIVYFIGDWIAQCYEGKPLFDFDLQRMFRSGLVGFTLHGSLSHYYYKFCEALF 224
           LAKMAISG+VY IGDWIAQCYEGKP+F+FD  R FRSGLVGF+LHGSLSHYYY+FCEALF
Sbjct: 61  LAKMAISGMVYSIGDWIAQCYEGKPIFEFDRTRTFRSGLVGFSLHGSLSHYYYQFCEALF 120

Query: 225 PFQDWWVVPAKVAFDQTVWAAVWNSIYFVVLGFLRFESAANIFSELKSTFWPMLTAGWKL 284
           PF+DWWVVPAKVAFDQTVWAA+WNSIY+V LG LRFES  NIFSELK+TFW MLTAGWKL
Sbjct: 121 PFEDWWVVPAKVAFDQTVWAALWNSIYYVALGLLRFESPDNIFSELKATFWLMLTAGWKL 180

Query: 285 WPFAHLVTYSVIPVEQRLLWVDCVELIWVTILSTYSNEKSEARILEATTEANSDSSS 341
           WPFAHL+TY VIP+EQRLLWVDCVELIWVTILSTYSNEKSEARI + T EANS SS 
Sbjct: 181 WPFAHLITYGVIPLEQRLLWVDCVELIWVTILSTYSNEKSEARISDTTLEANSSSSG 237

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	346
TAIR|locus:2128731	361	AT4G03410 "AT4G03410" [Arabido	0.731	0.700	0.769	7.8e-110
TAIR|locus:2011496	366	AT1G52870 "AT1G52870" [Arabido	0.713	0.674	0.766	7e-109
UNIPROTKB|Q2KIY1	196	PXMP2 "Peroxisomal membrane pr	0.497	0.877	0.288	4e-19
MGI|MGI:107487	194	Pxmp2 "peroxisomal membrane pr	0.497	0.886	0.268	2.5e-17
RGD|61812	194	Pxmp2 "peroxisomal membrane pr	0.505	0.902	0.269	2.5e-17
UNIPROTKB|Q9NR77	195	PXMP2 "Peroxisomal membrane pr	0.497	0.882	0.267	4.1e-17
UNIPROTKB|G3V9N2	194	Pxmp2 "Peroxisomal membrane pr	0.497	0.886	0.262	1.5e-16
TAIR|locus:505006551	261	AT4G33905 [Arabidopsis thalian	0.505	0.670	0.278	1.5e-16
ZFIN|ZDB-GENE-040912-184	194	zgc:92599 "zgc:92599" [Danio r	0.471	0.840	0.255	2.6e-16
TAIR|locus:2060459	252	AT2G14860 "AT2G14860" [Arabido	0.494	0.678	0.298	3.5e-16

TAIR|locus:2128731 AT4G03410 "AT4G03410" [Arabidopsis thaliana (taxid:3702)]

 Score = 1085 (387.0 bits), Expect = 7.8e-110, P = 7.8e-110
 Identities = 197/256 (76%), Positives = 222/256 (86%)

Query:    86 SEDFEAVSSDDKEVVGDNDKLISRAINATIVLGAGTFAVTRLLTIDHDYWHGWTLYEILR 145
             +++F+A     ++ V D D+L+SR INA IVL AGT AVT+LLTIDHDYW GWTLYEILR
Sbjct:    62 NDNFKAEEELSEDKVEDTDRLMSRGINAAIVLAAGTVAVTKLLTIDHDYWQGWTLYEILR 121

Query:   146 YVPEHNWIAYEQALKANPVLAKMAISGIVYFIGDWIAQCYEGKPLFDFDLQRMFRSGLVG 205
             Y PEHNW AYEQ LK NPVLAKMAISGIVY +GDWIAQCYEGKPLF+FD  R+ RSGLVG
Sbjct:   122 YAPEHNWFAYEQILKTNPVLAKMAISGIVYSLGDWIAQCYEGKPLFEFDRTRVLRSGLVG 181

Query:   206 FTLHGSLSHYYYKFCEALFPFQDWWVVPAKVAFDQTVWAAVWNSIYFVVLGFLRFESAAN 265
             FTLHGSLSHYYY+FCEALFPFQ+WWVVPAKVAFDQTVW+A+WNSIYF VLG LRF+S A+
Sbjct:   182 FTLHGSLSHYYYQFCEALFPFQEWWVVPAKVAFDQTVWSAIWNSIYFTVLGLLRFQSPAD 241

Query:   266 IFSELKSTFWPMLTAGWKLWPFAHLVTYSVIPVEQRLLWVDCVELIWVTILSTYSNEKSE 325
             IFSE+K+TF PMLTAGWKLWP AHLVTY VIPV+QRLLWVDC+ELIWVTILSTYSNEK+E
Sbjct:   242 IFSEIKTTFLPMLTAGWKLWPLAHLVTYGVIPVDQRLLWVDCIELIWVTILSTYSNEKAE 301

Query:   326 ARILEATTEANSDSSS 341
             A   +A+ E NS S S
Sbjct:   302 A---QASEETNSSSHS 314

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2011496 AT1G52870 "AT1G52870" [Arabidopsis thaliana (taxid:3702)]

 Score = 1076 (383.8 bits), Expect = 7.0e-109, P = 7.0e-109
 Identities = 190/248 (76%), Positives = 217/248 (87%)

Query:    95 DDKEVVGDN-DKLISRAINATIVLGAGTFAVTRLLTIDHDYWHGWTLYEILRYVPEHNWI 153
             D+K    +  +K+I R INATIVL AG++A+T+LLTIDHDYWHGWTL+EILRY P+HNWI
Sbjct:   112 DEKRRENEEMEKMIDRTINATIVLAAGSYAITKLLTIDHDYWHGWTLFEILRYAPQHNWI 171

Query:   154 AYEQALKANPVLAKMAISGIVYFIGDWIAQCYEGKPLFDFDLQRMFRSGLVGFTLHGSLS 213
             AYE+ALK NPVLAKM ISG+VY +GDWIAQCYEGKPLF+ D  R  RSGLVGFTLHGSLS
Sbjct:   172 AYEEALKQNPVLAKMVISGVVYSVGDWIAQCYEGKPLFEIDRARTLRSGLVGFTLHGSLS 231

Query:   214 HYYYKFCEALFPFQDWWVVPAKVAFDQTVWAAVWNSIYFVVLGFLRFESAANIFSELKST 273
             H+YY+FCE LFPFQDWWVVP KVAFDQTVW+A+WNSIYF VLGFLRFES  +IF ELK+T
Sbjct:   232 HFYYQFCEELFPFQDWWVVPVKVAFDQTVWSAIWNSIYFTVLGFLRFESPISIFKELKAT 291

Query:   274 FWPMLTAGWKLWPFAHLVTYSVIPVEQRLLWVDCVELIWVTILSTYSNEKSEARILEATT 333
             F PMLTAGWKLWPFAHL+TY ++PVEQRLLWVDCVELIWVTILSTYSNEKSEARI E+  
Sbjct:   292 FLPMLTAGWKLWPFAHLITYGLVPVEQRLLWVDCVELIWVTILSTYSNEKSEARISESVI 351

Query:   334 EANSDSSS 341
             E +S S++
Sbjct:   352 ETSSSSTT 359

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q2KIY1 PXMP2 "Peroxisomal membrane protein 2" [Bos taurus (taxid:9913)]

 Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
 Identities = 51/177 (28%), Positives = 89/177 (50%)

Query:   147 VPEHNWIAYEQALKANPVLAKMAISGIVYFIGDWIAQCYEGKPLFD-----FDLQRMFRS 201
             +P      Y + L+  PVL K A SGI+  +G+++AQ  E K   +      D+    R 
Sbjct:    17 LPRRALSQYLRLLRLYPVLTKAATSGILSALGNFLAQLIEKKQKKENCSQKLDVSGPLRY 76

Query:   202 GLVGFTLHGSLSHYYYKFCEALFPFQDWWVVPAKVAFDQTVWAAVWNSIYFVVLGFLRFE 261
              + GF   G L H++Y   E   P +       ++  D+ ++A  + S++F+V+ FL  +
Sbjct:    77 AIYGFFFTGPLGHFFYLLMERWIPSEVPLAGIKRLLLDRLLFAPAFLSLFFLVMNFLEGQ 136

Query:   262 SAANIFSELKSTFWPMLTAGWKLWPFAHLVTYSVIPVEQRLLWVDCVELIWVTILST 318
               A   +++KS FWP L   W++W     +  + IPV+ R+L+ + V L W   L++
Sbjct:   137 DTAAFAAKMKSGFWPALRMNWRVWTPVQFININYIPVQFRVLFANLVALFWYAYLAS 193

GO:0005778 "peroxisomal membrane" evidence=IEA

GO:0043234 "protein complex" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:107487 Pxmp2 "peroxisomal membrane protein 2" [Mus musculus (taxid:10090)]

 Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
 Identities = 47/175 (26%), Positives = 86/175 (49%)

Query:   147 VPEHNWIAYEQALKANPVLAKMAISGIVYFIGDWIAQCYEGKPLFD---FDLQRMFRSGL 203
             +P+     Y   LK  PVL K   SGI+  +G+ +AQ  E K   D    ++  + R  +
Sbjct:    17 LPKRALAQYLLLLKLYPVLTKAVSSGILSALGNLLAQTIEKKQRKDSRLLEVSGLLRYLV 76

Query:   204 VGFTLHGSLSHYYYKFCEALFPFQDWWVVPAKVAFDQTVWAAVWNSIYFVVLGFLRFESA 263
              G  + G LSHY Y F E   P +  W    ++  D+  +A  +  ++F V+  L  ++ 
Sbjct:    77 YGLFVTGPLSHYLYLFMEYSVPPEVPWASVKRLLLDRLFFAPTFLLLFFFVMNLLEGKNV 136

Query:   264 ANIFSELKSTFWPMLTAGWKLWPFAHLVTYSVIPVEQRLLWVDCVELIWVTILST 318
             +   ++++S FWP L   W++W     +  + +P++ R+L+ +   L W   L++
Sbjct:   137 SVFVAKMRSGFWPALQMNWRMWTPLQFININYVPLQFRVLFANMAALFWYAYLAS 191

GO:0005737 "cytoplasm" evidence=ISO

GO:0005739 "mitochondrion" evidence=IDA

GO:0005777 "peroxisome" evidence=ISO

GO:0005778 "peroxisomal membrane" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0043234 "protein complex" evidence=ISO

RGD|61812 Pxmp2 "peroxisomal membrane protein 2" [Rattus norvegicus (taxid:10116)]

 Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
 Identities = 48/178 (26%), Positives = 88/178 (49%)

Query:   144 LRYVPEHNWIAYEQALKANPVLAKMAISGIVYFIGDWIAQCYEGKPLFD---FDLQRMFR 200
             LR +P+     Y   LK  PV+ K   SGI+  +G+ +AQ  E K   D    ++  + R
Sbjct:    14 LRSLPKRALAQYLLFLKFYPVVTKAVSSGILSALGNLLAQMIEKKQKKDSRSLEVSGLLR 73

Query:   201 SGLVGFTLHGSLSHYYYKFCEALFPFQDWWVVPAKVAFDQTVWAAVWNSIYFVVLGFLRF 260
               + G  + G LSHY Y F E   P +  W    ++  D+  +A  +  ++F V+  L  
Sbjct:    74 YLVYGLFVTGPLSHYLYLFMEYWVPPEVPWARVKRLLLDRLFFAPTFLLLFFFVMNLLEG 133

Query:   261 ESAANIFSELKSTFWPMLTAGWKLWPFAHLVTYSVIPVEQRLLWVDCVELIWVTILST 318
             ++ +   ++++S FWP L   W++W     +  + +P++ R+L+ +   L W   L++
Sbjct:   134 KNISVFVAKMRSGFWPALQMNWRMWTPLQFININYVPLQFRVLFANMAALFWYAYLAS 191

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=ISO

GO:0005739 "mitochondrion" evidence=ISO

GO:0005777 "peroxisome" evidence=IDA

GO:0005778 "peroxisomal membrane" evidence=ISO;IDA

GO:0005779 "integral to peroxisomal membrane" evidence=TAS

GO:0043234 "protein complex" evidence=ISO

UNIPROTKB|Q9NR77 PXMP2 "Peroxisomal membrane protein 2" [Homo sapiens (taxid:9606)]

 Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
 Identities = 47/176 (26%), Positives = 88/176 (50%)

Query:   147 VPEHNWIAYEQALKANPVLAKMAISGIVYFIGDWIAQCYEGKPLFD----FDLQRMFRSG 202
             +P      Y   L+  PVL K A SGI+  +G+++AQ  E K   +     D+    R  
Sbjct:    17 LPRRALAQYLLFLRLYPVLTKAATSGILSALGNFLAQMIEKKRKKENSRSLDVGGPLRYA 76

Query:   203 LVGFTLHGSLSHYYYKFCEALFPFQDWWVVPAKVAFDQTVWAAVWNSIYFVVLGFLRFES 262
             + GF   G LSH++Y F E   P +       ++  D+ V+A  +  ++F+++ FL  + 
Sbjct:    77 VYGFFFTGPLSHFFYFFMEHWIPPEVPLAGLRRLLLDRLVFAPAFLMLFFLIMNFLEGKD 136

Query:   263 AANIFSELKSTFWPMLTAGWKLWPFAHLVTYSVIPVEQRLLWVDCVELIWVTILST 318
             A+   ++++  FWP L   W++W     +  + +P++ R+L+ +   L W   L++
Sbjct:   137 ASAFAAKMRGGFWPALRMNWRVWTPLQFININYVPLKFRVLFANLAALFWYAYLAS 192

GO:0016021 "integral to membrane" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005778 "peroxisomal membrane" evidence=IDA

GO:0008150 "biological_process" evidence=ND

GO:0043234 "protein complex" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|G3V9N2 Pxmp2 "Peroxisomal membrane protein 2, isoform CRA_b" [Rattus norvegicus (taxid:10116)]

 Score = 205 (77.2 bits), Expect = 1.5e-16, P = 1.5e-16
 Identities = 46/175 (26%), Positives = 86/175 (49%)

Query:   147 VPEHNWIAYEQALKANPVLAKMAISGIVYFIGDWIAQCYEGKPLFD---FDLQRMFRSGL 203
             +P+     Y   LK  PV+ K   SGI+  +G+ +AQ  E K   D    ++  + R  +
Sbjct:    17 LPKRALAQYLLFLKFYPVVTKAVSSGILSALGNLLAQMIEKKQKKDSRSLEVSGLLRYLV 76

Query:   204 VGFTLHGSLSHYYYKFCEALFPFQDWWVVPAKVAFDQTVWAAVWNSIYFVVLGFLRFESA 263
              G  + G LSHY Y F E   P +  W    ++  D+  +A  +  ++F V+  L  ++ 
Sbjct:    77 YGLFVTGPLSHYLYLFMEYWVPPEVPWARVKRLLLDRLFFAPTFLLLFFFVMNLLEGKNI 136

Query:   264 ANIFSELKSTFWPMLTAGWKLWPFAHLVTYSVIPVEQRLLWVDCVELIWVTILST 318
             +   ++++S FWP L   W++W     +  + +P++ R+L+ +   L W   L++
Sbjct:   137 SVFVAKMRSGFWPALQMNWRMWTPLQFININYVPLQFRVLFANMAALFWYAYLAS 191

GO:0005739 "mitochondrion" evidence=IEA

GO:0005778 "peroxisomal membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0043234 "protein complex" evidence=IEA

TAIR|locus:505006551 AT4G33905 [Arabidopsis thaliana (taxid:3702)]

 Score = 205 (77.2 bits), Expect = 1.5e-16, P = 1.5e-16
 Identities = 49/176 (27%), Positives = 79/176 (44%)

Query:   155 YEQALKANPVLAKMAISGIVYFIGDWIAQCYEGKPLFDFDLQRMFRSGLVGFTLHGSLSH 214
             Y   +K+ PVL K   S ++Y   D  +Q      +  +DL R  R G  G  + G   H
Sbjct:    86 YLGMVKSRPVLTKSVTSSLIYIAADLSSQTIPQASVDSYDLVRTARMGGYGLLILGPTLH 145

Query:   215 YYYKFCEALFPFQDWWVVPAKVAFDQTVWAAVWNSIYFVVLGFLRFESAANIFSELKSTF 274
             Y++    +LFP +D      K+A  QTV+    N ++F +   L+ E+ + I + LK   
Sbjct:   146 YWFNLMSSLFPKRDLITTFKKMAMGQTVYGPAMNVVFFSLNAALQGENGSEIVARLKRDL 205

Query:   275 WPMLTAGWKLWPFAHLVTYSVIPVEQRLLWVDCVELIWVTILSTYSNEKSEARILE 330
              P +  G   WP    +T+   PV  + L  +    +W TI  TY   ++    +E
Sbjct:   206 LPTMLNGVMYWPLCDFITFKFCPVYLQPLVSNSFSYLW-TIYITYMASRATPTAIE 260

GO:0005739 "mitochondrion" evidence=ISM

GO:0005778 "peroxisomal membrane" evidence=ISS

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

GO:0009694 "jasmonic acid metabolic process" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

ZFIN|ZDB-GENE-040912-184 zgc:92599 "zgc:92599" [Danio rerio (taxid:7955)]

 Score = 203 (76.5 bits), Expect = 2.6e-16, P = 2.6e-16
 Identities = 44/172 (25%), Positives = 89/172 (51%)

Query:   155 YEQALKANPVLAKMAISGIVYFIGDWIAQC--Y-----EGKPLFDFDLQRMFRSGLVGFT 207
             Y   LK  P++ K   SGI+  +G+ ++Q   Y     E  P     +       + G  
Sbjct:    21 YLSLLKKYPIITKSVTSGILSALGNLLSQVLEYQKNVKENSPKKKISILGPVHFAIYGLF 80

Query:   208 LHGSLSHYYYKFCEALFPFQDWWVVPAKVAFDQTVWAAVWNSIYFVVLGFLRFESAANIF 267
             + G +SHY+Y   E L P    + +  ++  ++ ++A  +  +++VV+  L  ++ A++ 
Sbjct:    81 ITGPVSHYFYHLLEVLLPTTVPYCLIKRLLLERLIFAPAFLLLFYVVMNALEGKTLADVQ 140

Query:   268 SELKSTFWPMLTAGWKLW-PFAHLVTYSVIPVEQRLLWVDCVELIWVTILST 318
             ++LK+++WP +   WK+W PF   +  + +PV+ R+L+ + V L W   L++
Sbjct:   141 NKLKTSYWPAMKMNWKVWTPF-QFININYVPVQFRVLFANMVALFWYAYLAS 191

GO:0016021 "integral to membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

TAIR|locus:2060459 AT2G14860 "AT2G14860" [Arabidopsis thaliana (taxid:3702)]

 Score = 202 (76.2 bits), Expect = 3.5e-16, P = 3.5e-16
 Identities = 52/174 (29%), Positives = 78/174 (44%)

Query:   155 YEQALKANPVLAKMAISGIVYFIGDWIAQCYEGKPLFDFDLQRMFRSGLVGFTLHGSLSH 214
             Y   +K++PV+ K   S ++Y   D  +Q         +DL R  R G  G  + G   H
Sbjct:    77 YLGMVKSHPVVTKSVTSSLIYIAADLSSQTIAKTSSESYDLVRTARMGGYGLFVLGPTLH 136

Query:   215 YYYKFCEALFPFQDWWVVPAKVAFDQTVWAAVWNSIYFVVLGFLRFESAANIFSELKSTF 274
             Y++ F   LFP QD      K+A  QT++  +   I+F +   L+ E  + I + LK   
Sbjct:   137 YWFNFMSRLFPKQDLITTFKKMAMGQTIYGPIMTVIFFSLNASLQGERGSVILARLKRDL 196

Query:   275 WPMLTAGWKLWPFAHLVTYSVIPVEQRLLWVDCVELIWVTILSTY--SNEKSEA 326
              P L  G   WP    +T+   PV  + L  +    +W TI  TY  + EK  A
Sbjct:   197 LPALFNGVMYWPLCDFITFRFFPVHLQPLVSNSFSYVW-TIYMTYMANREKPVA 249

GO:0005778 "peroxisomal membrane" evidence=ISS

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00025998001 SubName- Full=Chromosome chr12 scaffold_36, whole genome shotgun sequence; (378 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	346
pfam04117	68	pfam04117, Mpv17_PMP22, Mpv17 / PMP22 family	1e-16

>gnl|CDD|202894 pfam04117, Mpv17_PMP22, Mpv17 / PMP22 family

 Score = 73.0 bits (180), Expect = 1e-16
 Identities = 26/67 (38%), Positives = 39/67 (58%)

Query: 255 LGFLRFESAANIFSELKSTFWPMLTAGWKLWPFAHLVTYSVIPVEQRLLWVDCVELIWVT 314
           +G L  +S   I  +LK  FWP L A WK+WP    + ++ +PV  R+L+V+ V + W T
Sbjct: 1   MGLLEGKSLEEIKEKLKEKFWPTLKANWKVWPPVQFINFAFVPVHYRVLFVNLVGIGWNT 60

Query: 315 ILSTYSN 321
            LS  +N
Sbjct: 61  YLSYVNN 67

The 22-kDa peroxisomal membrane protein (PMP22) is a major component of peroxisomal membranes. PMP22 seems to be involved in pore forming activity and may contribute to the unspecific permeability of the organelle membrane. PMP22 is synthesised on free cytosolic ribosomes and then directed to the peroxisome membrane by specific targeting information. Mpv17 is a closely related peroxisomal protein. In mouse, the Mpv17 protein is involved in the development of early-onset glomerulosclerosis. More recently a homolog of Mpv17 in S. cerevisiae has been been found to be an integral membrane protein of the inner mitochondrial membrane where it has been proposed to have a role in ethanol metabolism and tolerance during heat-shock. Defects in MPV17 is associated with mitochondrial DNA depletion syndrome (MDDS) and Navajo neurohepatopathy (NNH). MDDS is a clinically heterogeneous group of disorders characterized by a reduction in mitochondrial DNA (mtDNA) copy number. Primary mtDNA depletion is inherited as an autosomal recessive trait and may affect single organs, typically muscle or liver, or multiple tissues. Individuals with the hepatocerebral form of mitochondrial DNA depletion syndrome have early progressive liver failure and neurologic abnormalities, hypoglycemia, and increased lactate in body fluids. NNH is an autosomal recessive disease that is prevalent among Navajo children in the South Western states of America. The major clinical features are hepatopathy, peripheral neuropathy, corneal anesthesia and scarring, acral mutilation, cerebral leukoencephalopathy, failure to thrive, and recurrent metabolic acidosis with intercurrent infections. Infantile, childhood, and classic forms of NNH have been described. Mitochondrial DNA depletion was detected in the livers of patients, suggesting a primary defect in mtDNA maintenance. Length = 68

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	346
KOG1944	222	consensus Peroxisomal membrane protein MPV17 and r	100.0
PF04117	68	Mpv17_PMP22: Mpv17 / PMP22 family ; InterPro: IPR0	99.85

>KOG1944 consensus Peroxisomal membrane protein MPV17 and related proteins [General function prediction only]

Probab=100.00  E-value=1.7e-38  Score=295.42  Aligned_cols=171  Identities=32%  Similarity=0.660  Sum_probs=162.2

Q ss_pred             HHhCChhHHHHHHHHHH-HHHHHHHhhhcCCC---CCCCcHHHHHHHHHHhhhhhchhhhHHHHHhhhhcCCCCcccchh
Q 019056          159 LKANPVLAKMAISGIVY-FIGDWIAQCYEGKP---LFDFDLQRMFRSGLVGFTLHGSLSHYYYKFCEALFPFQDWWVVPA  234 (346)
Q Consensus       159 L~~~PLlTKavTSGvL~-~lGD~iAQ~ie~k~---~~~~D~~Rtlrfal~G~l~~GPl~H~WY~~LdrlfP~~~~~~vl~  234 (346)
                      ...+|+++++++++.+. ..||+++|.++++.   ...+|+.|++||+++|+++.||.+|+||++||+++|.+...++++
T Consensus        46 ~~~~~~l~~~i~~~~~~~~~~d~~~q~~~~~~~~~~~~~d~~rtlr~~~~G~~f~gp~~~~Wy~~L~~~~p~~~~~~~~~  125 (222)
T KOG1944|consen   46 FSLYPLLTKAITTSLLLAAAGDVISQSLEGRSKKLFQTLDLTRTLRMGIFGFLFVGPTLHYWYRLLSKLFPKKTLITVVK  125 (222)
T ss_pred             hhhhhHHHHHHHHHHHHHHhchhhhhhhhhhcccccccccHHHHHHHHhhhhheeccchhHHHHHHHHHccCccHHHHHH
Confidence            56799999999999999 99999999998765   578999999999999999999999999999999999999999999


Q ss_pred             hhhhhhHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhhHHHHhhccchhhHHHhhhheeccCCchhhhhhHHHHHHHH
Q 019056          235 KVAFDQTVWAAVWNSIYFVVLGFLRFESAANIFSELKSTFWPMLTAGWKLWPFAHLVTYSVIPVEQRLLWVDCVELIWVT  314 (346)
Q Consensus       235 KVllDQlV~aPi~~~~Ff~~~~lLeG~s~~~i~~klk~~~~ptl~asw~vWPpaq~INF~fVP~~~RvLfvn~V~l~Wnt  314 (346)
                      |+++||++++|+++.+||.+|++++|++.++++++++++++|+++++|++||++|++||+|||+++|++|+|+++++|++
T Consensus       126 kvl~dql~~~P~~~~~ff~~~~~legk~~~~~~~~~~~~~~p~l~~~~~~WP~~q~inF~~VP~~~rvl~~~~vsl~W~~  205 (222)
T KOG1944|consen  126 KVLLDQLVFAPLFIVVFFLLMGLLEGKTNEEAKAKLKRKFWPTLKANWMVWPLVQFINFRLVPLQYRVLFVNIVSLVWNT  205 (222)
T ss_pred             HHHHhhhhhchHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhhhheecchhheeeeEEccccceehhhhhHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhccCcchhhhhh
Q 019056          315 ILSTYSNEKSEARIL  329 (346)
Q Consensus       315 yLS~~~n~~~e~r~~  329 (346)
                      |||++++++.+.+.+
T Consensus       206 ~Ls~~~~~~~~~~~~  220 (222)
T KOG1944|consen  206 YLSYKNASLVELAGA  220 (222)
T ss_pred             HHHHHhhcccccccc
Confidence            999999887544433

>PF04117 Mpv17_PMP22: Mpv17 / PMP22 family ; InterPro: IPR007248 The 22 kDa peroxisomal membrane protein (PMP22) is a major component of peroxisomal membranes

Probab=99.85  E-value=5.1e-22  Score=152.65  Aligned_cols=68  Identities=38%  Similarity=0.792  Sum_probs=66.1

Q ss_pred             HHHhcCCCHHHHHHHHHhhhHHHHhhccchhhHHHhhhheeccCCchhhhhhHHHHHHHHHHhhccCc
Q 019056          255 LGFLRFESAANIFSELKSTFWPMLTAGWKLWPFAHLVTYSVIPVEQRLLWVDCVELIWVTILSTYSNE  322 (346)
Q Consensus       255 ~~lLeG~s~~~i~~klk~~~~ptl~asw~vWPpaq~INF~fVP~~~RvLfvn~V~l~WntyLS~~~n~  322 (346)
                      |+++||++++++++++|++|+++++++|++|||+|++||.|||+++|++|+|+|+++||+|||+++|+
T Consensus         1 Mg~l~g~s~~~~~~~l~~~~~~~~~~~~~~Wp~~~~vnF~~vP~~~Rv~~~~~v~~~W~~~LS~~~~r   68 (68)
T PF04117_consen    1 MGLLEGKSWEEIKEKLKRDYWPTLKASWKFWPPAQIVNFRYVPPHYRVLFVNVVSFFWNTYLSYIANR   68 (68)
T ss_pred             CCcccCCCHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHhcccChhhhhhhhhhHHHHHHHHHHHHhcC
Confidence            57899999999999999999999999999999999999999999999999999999999999999875

PMP22 seems to be involved in pore-forming activity and may contribute to the unspecific permeability of the organelle membrane. PMP22 is synthesised on free cytosolic ribosomes and then directed to the peroxisome membrane by specific targeting information []. Mpv17 is a closely related peroxisomal protein involved in the development of early-onset glomerulosclerosis []. A member of this family found in Saccharomyces cerevisiae (Baker's yeast) is an integral membrane protein of the inner mitochondrial membrane and has been suggested to play a role in mitochondrial function during heat shock [].; GO: 0016021 integral to membrane

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	346
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.2 bits (111), Expect = 6e-06
 Identities = 37/207 (17%), Positives = 72/207 (34%), Gaps = 40/207 (19%)

Query: 65  EVFPADNKLL--KDDKNGLL----VNGSEDFEAVSSDDKEVVGDNDKLISRAINATIVLG 118
            +     +LL  K  +N LL    V  ++ + A +   K ++       +R    T  L 
Sbjct: 229 SIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILL------TTRFKQVTDFLS 282

Query: 119 AGTFAVTRLLTIDHDYWHGWTLYEILRYVPEHNWIAY------EQALKANPVLAKMAISG 172
           A T   T  +++DH      T  E+   +    ++         + L  NP      +S 
Sbjct: 283 AAT---TTHISLDHHSM-TLTPDEVKSLLL--KYLDCRPQDLPREVLTTNP----RRLSI 332

Query: 173 IVYFIGDWIAQCYEGKPLFDFD-LQRMFRSGLVGFTLHGSLSHYYYKFCEALFPFQDWWV 231
           I   I D +A  ++     + D L  +  S L            + +   ++FP      
Sbjct: 333 IAESIRDGLAT-WDNWKHVNCDKLTTIIESSLNVLE-PAEYRKMFDRL--SVFP-PSAH- 386

Query: 232 VPAKVAFDQTVWAAVWNSIYFVVLGFL 258
           +P  +     +W   ++ I   V+  +
Sbjct: 387 IPTILL--SLIW---FDVIKSDVMVVV 408

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00