Citrus Sinensis ID: 019093

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340------
Protein Sequence
MELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI
Secondary Structure (PSIPRED)
cEEEEccccccccccccHHHHHHHHHHHHccccEEEEccccccccccHHHHHHHHHHHHHHccccccEEEEEEEEEcccccHHHHHHHHHcccEEEEEEEccccccccccccccHHHHHHHHHHHHHHccccEEEEEccccccccccccHHHHHHHHHHHHHHHccccEEEEEEcccHHHHHHHHHccccEEEEEEEcccHHccHHHHHccccccccEEccccccHHHHHHHHHHHHcccccEEEcccccccccccccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHccccccccccccccccEEEEEcccccccEEEcccccEEEcccccEEEEEEEEc
Secondary Structure Prediction (SSPRO)
cEEEEEcccEEEEccccHHHHHHHHHHHHccccEEEEccccccccccHHHHHHHHHHHHHHcccccccEEEEEEEccccccHHHHHHHHHcccEEEEEEccccccccccccccccHHHHHHHHHHHHHHcccEEEccccccccccHHHHHHHHHHHcHHHHHHHcccccEEEcccccHHHHHHHHcccccEEEEEEcHHHHHccHHHHHcccEcHHHccccccccHHHHHHHHHHHHHccccEEEcccEccccHHHHccccEcccccccccHHHHHHHHHHHcccHHHHHHHHHcHHHHHHcccccccEEEEEcccEEccccEEccccEEcccccccEEccEEEEc
Coil and Loop (DISEMBL)
meltltqpddwhlhlrdgdllkavvphsvshygraivmpnlkppitTTAAAVAYRESILKalpassnftplmtlyltdttspdeikLARKTGVVFAVKlypagattnsqdgvTDLFGKCVHVLEEMVEqnmpllvhgevtdpivdifdrEKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNalfqgglrphnyclpvlkreIHRQAVVSAVTSgsrkfflgtdsaphergrkecacgcagiynaPVALSLYAKVFEEMGALDkleaftsfngpdfyglprntskikltkipwkvpeafsfsfgdiipmfagntlewqpsli
Flexible Loop (DISEMBL)
meltltqpddwhlhlrDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKAlpassnftPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAgattnsqdgvTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSavtsgsrkfflgtdsaphergRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSfngpdfyglpRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI
Low Complexity Region (SEG)
MELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTilqpliqrlpqlKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI
Disordered region (IsUnstruct)
*********DWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDS****RGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEW*****
Disordered Region (DISOPRED)
MELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI
Disordered Region (DISEMBL)
MELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI
Disordered Region (DISPRO)
MELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	346	2.2.26 [Sep-21-2011]
O04904	377	Dihydroorotase, mitochond	yes	no	0.991	0.909	0.822	1e-175
B1XI96	346	Dihydroorotase OS=Synecho	yes	no	0.979	0.979	0.633	1e-126
Q82WF3	349	Dihydroorotase OS=Nitroso	yes	no	0.979	0.971	0.615	1e-124
B2AH54	344	Dihydroorotase OS=Cupriav	yes	no	0.979	0.985	0.607	1e-121
Q1LRD4	344	Dihydroorotase OS=Ralston	yes	no	0.985	0.991	0.609	1e-121
C1D672	345	Dihydroorotase OS=Laribac	yes	no	0.976	0.979	0.633	1e-121
Q8Y249	344	Dihydroorotase OS=Ralston	yes	no	0.976	0.982	0.614	1e-120
B0CF78	345	Dihydroorotase OS=Acaryoc	yes	no	0.979	0.982	0.604	1e-120
Q0AFI1	345	Dihydroorotase OS=Nitroso	yes	no	0.979	0.982	0.600	1e-120
B0JQJ1	344	Dihydroorotase OS=Microcy	yes	no	0.976	0.982	0.611	1e-120

>sp|O04904|PYRC_ARATH Dihydroorotase, mitochondrial OS=Arabidopsis thaliana GN=PYR4 PE=2 SV=1

 Score =  613 bits (1582), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 282/343 (82%), Positives = 319/343 (93%)

Query: 1   MELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILK 60
           MELT+TQPDDWHLHLRDGDLL AVVPHS S++ RAIVMPNLKPP+T+TAAA+ YR+ I+K
Sbjct: 33  MELTITQPDDWHLHLRDGDLLHAVVPHSASNFKRAIVMPNLKPPVTSTAAAIIYRKFIMK 92

Query: 61  ALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCV 120
           ALP+ S+F PLMTLYLTD T P+EI+LAR++GVV+AVKLYPAGATTNSQDGVTDLFGKC+
Sbjct: 93  ALPSESSFDPLMTLYLTDKTLPEEIRLARESGVVYAVKLYPAGATTNSQDGVTDLFGKCL 152

Query: 121 HVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDA 180
            VLEEMV+QNMPLLVHGEVTDP +D+FDREK+FI+T+LQPLIQRLPQLKVVMEHITTMDA
Sbjct: 153 PVLEEMVKQNMPLLVHGEVTDPSIDVFDREKIFIETVLQPLIQRLPQLKVVMEHITTMDA 212

Query: 181 VKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGS 240
           V FVESCKEG V ATVTPQHL+LNRNALFQGGL+PHNYCLPVLKREIHR+A+V AVTSGS
Sbjct: 213 VNFVESCKEGSVGATVTPQHLLLNRNALFQGGLQPHNYCLPVLKREIHREAIVKAVTSGS 272

Query: 241 RKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDF 300
           +KFFLGTDSAPHER RKE +CGCAGIY+AP+ALSLYAKVF+E GALDKLEAFTSFNGPDF
Sbjct: 273 KKFFLGTDSAPHERSRKESSCGCAGIYSAPIALSLYAKVFDEAGALDKLEAFTSFNGPDF 332

Query: 301 YGLPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQP 343
           YGLPRN+SKI L K PWKVP+ F+F FG+I+PMFAG TL+WQP
Sbjct: 333 YGLPRNSSKITLKKSPWKVPDVFNFPFGEIVPMFAGETLQWQP 375

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 5EC: .EC: 2EC: .EC: 3

>sp|B1XI96|PYRC_SYNP2 Dihydroorotase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=pyrC PE=3 SV=1

 Score =  450 bits (1158), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 216/341 (63%), Positives = 262/341 (76%), Gaps = 2/341 (0%)

Query: 2   ELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKA 61
           ++TLT+PDDWHLHLRDG+ LKAV+P +V  + RAIVMPNLKPP+ T A A AY + IL A
Sbjct: 3   KITLTRPDDWHLHLRDGEALKAVLPDTVRQFARAIVMPNLKPPVRTVAEAAAYHDRILAA 62

Query: 62  LPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVH 121
           +P    F PLMTLYLTD TSP EI+ A+++G V AVK YPAGATTNS  GVTD+  KC  
Sbjct: 63  IPPGRTFEPLMTLYLTDNTSPAEIQAAKESGFVKAVKYYPAGATTNSDLGVTDI-RKCDA 121

Query: 122 VLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAV 181
           V E M   ++PLL+HGEVTD  VD+FDREKVFI+T L+PL +R PQL++V+EHITT DAV
Sbjct: 122 VFEAMQTVDLPLLLHGEVTDHRVDVFDREKVFIETYLRPLKERFPQLRIVLEHITTKDAV 181

Query: 182 KFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSR 241
           +FV +  E  VAAT+TPQHL+ NRN++FQGG+RPH YCLP+LKRE HR+A++ A TSG+ 
Sbjct: 182 EFVLASDEK-VAATITPQHLLFNRNSIFQGGIRPHFYCLPILKRETHREALLEAATSGNP 240

Query: 242 KFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFY 301
           KFFLGTDSAPH R RKE  CGCAG Y+A  AL LYA VFE   ALDKLE F SF GPDFY
Sbjct: 241 KFFLGTDSAPHGRDRKESDCGCAGCYSALHALELYATVFEAADALDKLEGFASFYGPDFY 300

Query: 302 GLPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQ 342
            LPRNT KI LTK PW++P+A  F    ++P++AG  L W+
Sbjct: 301 QLPRNTEKITLTKTPWQIPDALPFPESSLVPLWAGQELSWK 341

Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (taxid: 32049)

EC: 3

EC: .

EC: 5

EC: .

EC: 2

EC: .

EC: 3

>sp|Q82WF3|PYRC_NITEU Dihydroorotase OS=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) GN=pyrC PE=3 SV=1

 Score =  446 bits (1147), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 211/343 (61%), Positives = 261/343 (76%), Gaps = 4/343 (1%)

Query: 2   ELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKA 61
           +LT T+PDDWHLHLRDG+ +++V+P +   + RAI+MPNLKPPI TT  A AYR  IL A
Sbjct: 7   KLTFTRPDDWHLHLRDGNAMRSVLPDTARRFARAIIMPNLKPPIVTTEQAAAYRVRILSA 66

Query: 62  LPA--SSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKC 119
           LPA  +  F PLMTLYLTDTTSP+EI  A+ +G+V  +KLYPAGATT+S  GVTD+  +C
Sbjct: 67  LPAELAGRFEPLMTLYLTDTTSPEEITRAQASGIVQGIKLYPAGATTHSDAGVTDI-ARC 125

Query: 120 VHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMD 179
              LE+M E +MPLLVHGEV DP VD+FDREK+FID +L PL+QR P L+VV EHITT +
Sbjct: 126 EATLEKMEELDMPLLVHGEVVDPAVDVFDREKIFIDRVLTPLLQRFPGLRVVFEHITTRE 185

Query: 180 AVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSG 239
           AV+FV++     +AAT+T  HL+LNRNALF GGLRPH+YCLPVLKREIHRQA++ A TSG
Sbjct: 186 AVEFVQTAPNR-IAATITAHHLMLNRNALFTGGLRPHHYCLPVLKREIHRQALLEAATSG 244

Query: 240 SRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPD 299
             +FFLGTDSAPH    KE ACGCAGIY+A  A+  YA+VFE+ G LD+LEAFTSF+GPD
Sbjct: 245 HSRFFLGTDSAPHPVRDKESACGCAGIYSAHAAIEFYAEVFEQAGRLDRLEAFTSFHGPD 304

Query: 300 FYGLPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQ 342
           FYGLPRNT +I L +  W++PE        +IP+ AG    W+
Sbjct: 305 FYGLPRNTDRISLIRESWQIPEQVELGEEKLIPLRAGEHARWK 347

Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) (taxid: 228410)

EC: 3

EC: .

EC: 5

EC: .

EC: 2

EC: .

EC: 3

>sp|B2AH54|PYRC_CUPTR Dihydroorotase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=pyrC PE=3 SV=1

 Score =  434 bits (1116), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 207/341 (60%), Positives = 248/341 (72%), Gaps = 2/341 (0%)

Query: 2   ELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKA 61
           +LT+T+PDDWHLHLRDG  L AV+P +   + RAIVMPNLKPP+TT A A AYR  IL A
Sbjct: 4   KLTITRPDDWHLHLRDGAALAAVLPDTARQFARAIVMPNLKPPVTTVAQAQAYRARILAA 63

Query: 62  LPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVH 121
           LPA   F PLMTLYLTD T P+EI  AR +G V  VKLYPAGATTNS  GVTD+  +C  
Sbjct: 64  LPAGMQFEPLMTLYLTDNTGPEEIAAARASGFVHGVKLYPAGATTNSDAGVTDIR-RCYP 122

Query: 122 VLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAV 181
            LE M    +PLLVHGEVTDP +DIFDRE VFI+ ++ PL + +P+LKVV EHITT DA 
Sbjct: 123 ALEAMQRAGLPLLVHGEVTDPAIDIFDREAVFIERVMTPLRRDMPELKVVFEHITTKDAA 182

Query: 182 KFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSR 241
           ++V     G V AT+T  HL+ NRNA+F GG+RPH YCLPVLKRE HR+A+V+A TSGS 
Sbjct: 183 QYVRDAS-GPVGATITAHHLLYNRNAIFTGGIRPHYYCLPVLKRETHREALVAAATSGSE 241

Query: 242 KFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFY 301
           +FFLGTDSAPH RG KE ACGCAG Y A  A+ LYA+ F+  GALDKLEAF SFNGP FY
Sbjct: 242 RFFLGTDSAPHARGLKEHACGCAGCYTALHAMELYAEAFDAAGALDKLEAFASFNGPAFY 301

Query: 302 GLPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQ 342
           GLPRNT  + L +  W++P    +    ++P+  G TL W+
Sbjct: 302 GLPRNTGTLTLEREDWELPAELPYGDTTLVPLRGGETLRWK 342

Cupriavidus taiwanensis (strain R1 / LMG 19424) (taxid: 164546)

EC: 3

EC: .

EC: 5

EC: .

EC: 2

EC: .

EC: 3

>sp|Q1LRD4|PYRC_RALME Dihydroorotase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=pyrC PE=3 SV=1

 Score =  434 bits (1116), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 209/343 (60%), Positives = 252/343 (73%), Gaps = 2/343 (0%)

Query: 2   ELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKA 61
           +LT+T+PDDWHLHLRDG  L AV+P +   + RAI+MPNLKPP+TT   A AYR  IL A
Sbjct: 4   KLTITRPDDWHLHLRDGAALAAVLPDTARQFARAIIMPNLKPPVTTVDQASAYRARILAA 63

Query: 62  LPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVH 121
           LPA   F PLMTLYLTD T P+EI  AR +G V  VKLYPAGATTNS  GVTD+  +C  
Sbjct: 64  LPAGMAFEPLMTLYLTDNTPPEEIVAARASGFVHGVKLYPAGATTNSDAGVTDI-RRCAA 122

Query: 122 VLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAV 181
            LE M  + +PLLVHGEVTD  +DIFDRE VFID +++PL +  P+LKVV EHITT DA 
Sbjct: 123 TLEAMQREGVPLLVHGEVTDGDIDIFDREAVFIDRVMKPLRRDFPELKVVFEHITTRDAA 182

Query: 182 KFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSR 241
           ++V    EG V AT+T  HL+ NRNA+F GG+RPH YCLPVLKREIHR+A+V A TSGS 
Sbjct: 183 QYVAEA-EGPVGATITAHHLLYNRNAIFTGGIRPHYYCLPVLKREIHREALVKAATSGSP 241

Query: 242 KFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFY 301
           +FFLGTDSAPH RG KE ACGCAG Y A  A+ LYA+ F+  GALDKLEAF+SFNGP FY
Sbjct: 242 RFFLGTDSAPHARGLKEHACGCAGCYTALHAMELYAEAFDAAGALDKLEAFSSFNGPAFY 301

Query: 302 GLPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQPS 344
           GLPRN+  + LT+  W++P    +    ++P+ AG TL W+ S
Sbjct: 302 GLPRNSGTLTLTREDWELPAELPYGDTTLVPLRAGETLRWKAS 344

Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) (taxid: 266264)

EC: 3

EC: .

EC: 5

EC: .

EC: 2

EC: .

EC: 3

>sp|C1D672|PYRC_LARHH Dihydroorotase OS=Laribacter hongkongensis (strain HLHK9) GN=pyrC PE=3 SV=1

 Score =  434 bits (1115), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 216/341 (63%), Positives = 253/341 (74%), Gaps = 3/341 (0%)

Query: 3   LTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKAL 62
           LTLT+PDDWHLHLRDG+ L AV  +S   + RAIVMPNLKPP+TT   A AYRE IL AL
Sbjct: 4   LTLTRPDDWHLHLRDGEALAAVAAYSAREFARAIVMPNLKPPVTTVVQAAAYRERILAAL 63

Query: 63  P-ASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVH 121
           P     F PLMTLYLTD T P EI    ++G V A+KLYPAGATTNS  GVT L G C+ 
Sbjct: 64  PPGGPAFEPLMTLYLTDNTPPAEIDRVAESGFVHALKLYPAGATTNSDAGVTSLSG-CLP 122

Query: 122 VLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAV 181
            L  M E  +PLLVHGEVTDP +D+FDRE VFIDT+LQPL+  LP L+VVMEHITT  A 
Sbjct: 123 TLTRMAELGVPLLVHGEVTDPQIDVFDREAVFIDTVLQPLLAELPTLRVVMEHITTRQAA 182

Query: 182 KFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSR 241
           +FV +  +  +AATVTPQH+++NRNALF GGLRPH+YCLPVLKRE HR A+  AVTSGS 
Sbjct: 183 EFVLAAPDN-IAATVTPQHMLMNRNALFTGGLRPHHYCLPVLKREEHRAAIARAVTSGST 241

Query: 242 KFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFY 301
           +FFLGTDSAPH R  KE ACGCAGI++A  AL LYA+ FE+ GALD+LEAF SFNGPDFY
Sbjct: 242 RFFLGTDSAPHARHAKEAACGCAGIFSAHAALPLYAEAFEDAGALDRLEAFASFNGPDFY 301

Query: 302 GLPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQ 342
            LPRNT  + L +  W VP +  +    ++P+ AG TL WQ
Sbjct: 302 RLPRNTGTVTLKREEWTVPASLPYGNDTLVPLRAGETLRWQ 342

Laribacter hongkongensis (strain HLHK9) (taxid: 557598)

EC: 3

EC: .

EC: 5

EC: .

EC: 2

EC: .

EC: 3

>sp|Q8Y249|PYRC_RALSO Dihydroorotase OS=Ralstonia solanacearum (strain GMI1000) GN=pyrC PE=3 SV=1

 Score =  433 bits (1113), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 209/340 (61%), Positives = 248/340 (72%), Gaps = 2/340 (0%)

Query: 3   LTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKAL 62
           LT+ +PDDWHLHLRDGD L  VV  +   +GRAI+MPNLKPP+TTTA A AYRE IL AL
Sbjct: 5   LTIVRPDDWHLHLRDGDALADVVGDTARQFGRAIIMPNLKPPVTTTAQARAYRERILAAL 64

Query: 63  PASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHV 122
           PA + F PLMTLYLTD T+P+E++ AR +G V  VKLYPAGATTNS  GVTDL  +C   
Sbjct: 65  PAGTRFEPLMTLYLTDNTTPEEVRAARASGFVHGVKLYPAGATTNSDAGVTDLR-RCAKT 123

Query: 123 LEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVK 182
           LE M +  MPLLVHGEVTDP VDIFDRE VFIDT++QPL +  P LKVV EHITT  A +
Sbjct: 124 LEAMQDVGMPLLVHGEVTDPTVDIFDREAVFIDTVMQPLRRDFPALKVVFEHITTKHAAE 183

Query: 183 FVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRK 242
           +V    +G V AT+T  HL+ NRNALF GG+RPH YCLPVLKRE HR A+V+A TSG  +
Sbjct: 184 YVRDA-QGPVGATITAHHLLYNRNALFVGGIRPHYYCLPVLKRETHRLALVAAATSGHPR 242

Query: 243 FFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYG 302
           FFLGTDSAPH +G KE ACGCAG Y A  A+ LYA+ FE+  ALDKLE F S +GPDFYG
Sbjct: 243 FFLGTDSAPHAKGLKEHACGCAGCYTALHAMELYAEAFEDANALDKLEGFASLHGPDFYG 302

Query: 303 LPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQ 342
           LPRN   + LT+  W++P    F    ++P+  G  L W+
Sbjct: 303 LPRNAGTLTLTRSQWQLPAEVPFGEQMLVPLRGGEMLRWK 342

Ralstonia solanacearum (strain GMI1000) (taxid: 267608)

EC: 3

EC: .

EC: 5

EC: .

EC: 2

EC: .

EC: 3

>sp|B0CF78|PYRC_ACAM1 Dihydroorotase OS=Acaryochloris marina (strain MBIC 11017) GN=pyrC PE=3 SV=1

 Score =  432 bits (1110), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 206/341 (60%), Positives = 253/341 (74%), Gaps = 2/341 (0%)

Query: 2   ELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKA 61
           +LTLT+PDDWHLHLRDGD LKAV+PHS   + RAIVMPNLKPP+ T A A  YR  IL A
Sbjct: 3   KLTLTRPDDWHLHLRDGDALKAVLPHSARQFARAIVMPNLKPPVRTVADAADYRNRILAA 62

Query: 62  LPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVH 121
           LP    F PLMTLYLTD TSP+EI  A+ +  V AVK YPAGATTNS  GVTD+  KC  
Sbjct: 63  LPVGQTFEPLMTLYLTDNTSPEEISAAKASKFVKAVKYYPAGATTNSDFGVTDI-RKCDR 121

Query: 122 VLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAV 181
           +   M ++++PLL+HGEVTD  +D+FDREKVFI+T L PL+ R P+L+VV+EHITT +AV
Sbjct: 122 IFAAMEQEDIPLLLHGEVTDTNIDVFDREKVFIETHLIPLVSRFPKLRVVLEHITTSEAV 181

Query: 182 KFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSR 241
            FV +  E  + AT+TPQHL+ +RNA+F+GG+RPH YCLP+LKRE HRQA++ A TSG+ 
Sbjct: 182 TFVLNTNEN-IGATITPQHLLFSRNAIFKGGIRPHYYCLPILKREKHRQALLQAATSGNP 240

Query: 242 KFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFY 301
           KFFLGTDSAPH R  KE +CGCAG Y+A  A+ LYA+ FE   ALDKLEAF SF GPDFY
Sbjct: 241 KFFLGTDSAPHARNSKEQSCGCAGCYSALHAMELYAEAFESANALDKLEAFASFYGPDFY 300

Query: 302 GLPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQ 342
            LPRNT  I L K  W++P+   F    ++P+ AG  + W+
Sbjct: 301 QLPRNTKTITLAKQTWQIPDEVPFPGTGLVPLRAGEEITWK 341

Acaryochloris marina (strain MBIC 11017) (taxid: 329726)

EC: 3

EC: .

EC: 5

EC: .

EC: 2

EC: .

EC: 3

>sp|Q0AFI1|PYRC_NITEC Dihydroorotase OS=Nitrosomonas eutropha (strain C91) GN=pyrC PE=3 SV=1

 Score =  432 bits (1110), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 206/343 (60%), Positives = 257/343 (74%), Gaps = 4/343 (1%)

Query: 2   ELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKA 61
           +LT T+PDDWHLHLRDG  +++V+P +   + RA++MPNLK P+ TT  A AYR  IL A
Sbjct: 4   KLTFTRPDDWHLHLRDGKAMQSVLPDTARRFARAMIMPNLKLPVVTTEQAAAYRARILSA 63

Query: 62  LPAS--SNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKC 119
           LP      F PLMTLYLTDTT+P+EI  A+ +G+V AVKLYPAGATT+S  GVTD+  +C
Sbjct: 64  LPQELVGQFEPLMTLYLTDTTTPEEISRAKASGIVQAVKLYPAGATTHSDAGVTDI-DRC 122

Query: 120 VHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMD 179
              L  M + +MPLLVHGEV DP VDIFDREK+FID +L PL+QR P L+VV EHITT +
Sbjct: 123 KATLAMMEKLDMPLLVHGEVVDPAVDIFDREKIFIDRVLIPLLQRFPGLRVVFEHITTRE 182

Query: 180 AVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSG 239
           AV+FV+S     +AAT+T  HL+LNRNALF GGL+PH+YCLPVLKREIHRQA+V+A TSG
Sbjct: 183 AVEFVQSISNR-IAATITAHHLMLNRNALFTGGLQPHHYCLPVLKREIHRQALVAAATSG 241

Query: 240 SRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPD 299
             +FFLGTDSAPH    KE ACGCAGIY+A  A+  YA++FE+ G LD+LEAF SF GPD
Sbjct: 242 HSRFFLGTDSAPHPLKDKESACGCAGIYSAHAAIEFYAEIFEQAGRLDRLEAFASFYGPD 301

Query: 300 FYGLPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQ 342
           FYGLPRNT +I L+K  W++P    F    ++P+ AG  + W+
Sbjct: 302 FYGLPRNTDQISLSKESWQIPGEVEFGGDRLVPLRAGEQVCWR 344

Nitrosomonas eutropha (strain C91) (taxid: 335283)

EC: 3

EC: .

EC: 5

EC: .

EC: 2

EC: .

EC: 3

>sp|B0JQJ1|PYRC_MICAN Dihydroorotase OS=Microcystis aeruginosa (strain NIES-843) GN=pyrC PE=3 SV=1

 Score =  431 bits (1109), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 208/340 (61%), Positives = 254/340 (74%), Gaps = 2/340 (0%)

Query: 3   LTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKAL 62
           LT+T+PDDWHLHLRDG  +KAV+PH+V  + RAI+MPNLKPP+ + A A +YRE IL A+
Sbjct: 4   LTMTRPDDWHLHLRDGAAMKAVLPHTVRQFARAIIMPNLKPPVRSVADAASYRERILAAV 63

Query: 63  PASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHV 122
           P    F PLMTLYLTD TSP+EI  A+ +  V AVK YPAGATTNS  GVTDL  +C  V
Sbjct: 64  PEGQQFEPLMTLYLTDNTSPEEIVAAKASQFVKAVKYYPAGATTNSDLGVTDL-RRCDGV 122

Query: 123 LEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVK 182
           L  M + +MPLL+HGEVTD  +D+FDREKVFI+  L PLI R P+L+VV EHITT DAVK
Sbjct: 123 LAAMEQVDMPLLLHGEVTDGDIDVFDREKVFIEKHLIPLITRFPKLRVVFEHITTADAVK 182

Query: 183 FVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRK 242
           FV S     VAAT+TPQHL+ +RN LF GG+RPH YCLP+LKRE HR A++ A TSG+ K
Sbjct: 183 FVLSANNN-VAATITPQHLLFSRNILFTGGIRPHFYCLPILKREDHRLALLQAATSGNPK 241

Query: 243 FFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYG 302
           FFLGTDSAPH R  KE +CGCAG Y+A  AL LYA+ FE + A+D+LE F SF+GPDFY 
Sbjct: 242 FFLGTDSAPHSRYSKESSCGCAGCYSALHALELYAEAFESVDAIDQLEGFASFHGPDFYQ 301

Query: 303 LPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQ 342
           LPRNT +I LTK PW++P+   F    ++P+ AG  + WQ
Sbjct: 302 LPRNTEQITLTKSPWRIPDELPFPESGLVPLRAGEEITWQ 341

Microcystis aeruginosa (strain NIES-843) (taxid: 449447)

EC: 3

EC: .

EC: 5

EC: .

EC: 2

EC: .

EC: 3

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	346
255553715	398	Dihydroorotase, mitochondrial precursor,	0.994	0.864	0.872	0.0
359485440	377	PREDICTED: dihydroorotase, mitochondrial	0.994	0.912	0.877	0.0
302143305	346	unnamed protein product [Vitis vinifera]	0.994	0.994	0.877	0.0
224095475	346	predicted protein [Populus trichocarpa]	1.0	1.0	0.869	0.0
363806922	346	uncharacterized protein LOC100815210 [Gl	0.988	0.988	0.850	1e-176
297803826	378	mitochondrial dihydroorotase [Arabidopsi	0.991	0.907	0.839	1e-175
146447410	374	mitochondrial dihydroorotase [Brassica n	0.979	0.906	0.849	1e-175
449494658	377	PREDICTED: dihydroorotase, mitochondrial	0.991	0.909	0.839	1e-174
357474373	346	Dihydroorotase [Medicago truncatula] gi|	1.0	1.0	0.826	1e-174
449437838	377	PREDICTED: dihydroorotase, mitochondrial	0.991	0.909	0.836	1e-174

>gi|255553715|ref|XP_002517898.1| Dihydroorotase, mitochondrial precursor, putative [Ricinus communis] gi|223542880|gb|EEF44416.1| Dihydroorotase, mitochondrial precursor, putative [Ricinus communis]

 Score =  644 bits (1662), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 300/344 (87%), Positives = 327/344 (95%)

Query: 1   MELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILK 60
           MELT+T+PDDWHLHLRDG++L+AVVPHS SH+GRAI+MPNLKPPITT  AA+AYRESILK
Sbjct: 53  MELTITRPDDWHLHLRDGEMLEAVVPHSASHFGRAIIMPNLKPPITTAVAALAYRESILK 112

Query: 61  ALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCV 120
           ALPA+S+F+PLMTLYLTDTTSP+EIKLAR++GVVFAVKLYPAGATTNSQDGVTDLFGKC+
Sbjct: 113 ALPANSDFSPLMTLYLTDTTSPNEIKLARRSGVVFAVKLYPAGATTNSQDGVTDLFGKCL 172

Query: 121 HVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDA 180
            VLEEMVEQNMPLLVHGEVTDP VDIFDREKVFIDT+LQPLIQ+LP+LKVVMEHITTMDA
Sbjct: 173 PVLEEMVEQNMPLLVHGEVTDPSVDIFDREKVFIDTVLQPLIQKLPRLKVVMEHITTMDA 232

Query: 181 VKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGS 240
           V+FV+SC EG VAATVTPQHLVLNRNA+FQGGL+PHNYCLPVLKRE HRQA+VSAVTSGS
Sbjct: 233 VRFVQSCDEGSVAATVTPQHLVLNRNAIFQGGLQPHNYCLPVLKRETHRQAIVSAVTSGS 292

Query: 241 RKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDF 300
           ++FFLGTDSAPHER RKEC+CGCAGIYNAPVALSLYAK+FEE GALDKLEAFTSFNGPDF
Sbjct: 293 KRFFLGTDSAPHERKRKECSCGCAGIYNAPVALSLYAKIFEEAGALDKLEAFTSFNGPDF 352

Query: 301 YGLPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQPS 344
           YGLPRN SKIKL K  WKVPEAFSF FGDIIPM AG TLEWQPS
Sbjct: 353 YGLPRNASKIKLAKNQWKVPEAFSFPFGDIIPMSAGETLEWQPS 396

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359485440|ref|XP_002274917.2| PREDICTED: dihydroorotase, mitochondrial-like [Vitis vinifera]

 Score =  642 bits (1656), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 302/344 (87%), Positives = 326/344 (94%)

Query: 1   MELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILK 60
           MEL+LTQPDDWHLHLRDGDLL+AVV HS SH+GR IVMPNLKPPITTTAAAVAYRESILK
Sbjct: 32  MELSLTQPDDWHLHLRDGDLLEAVVSHSASHFGRGIVMPNLKPPITTTAAAVAYRESILK 91

Query: 61  ALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCV 120
           ALPA+ +FTPLMTLYLTD TSP+EIKLAR +GVVFAVKLYPAGATTNSQDGVTDLFGKC+
Sbjct: 92  ALPANCDFTPLMTLYLTDKTSPNEIKLARNSGVVFAVKLYPAGATTNSQDGVTDLFGKCL 151

Query: 121 HVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDA 180
            VLEEMVEQNMPLLVHGEVT+P VD+FDREKVFI+T+L+PLIQ+ P+LKVVMEHITTMDA
Sbjct: 152 PVLEEMVEQNMPLLVHGEVTNPEVDVFDREKVFIETVLRPLIQKFPRLKVVMEHITTMDA 211

Query: 181 VKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGS 240
           V+FVESC EG VAATVTPQHLVLNRN+LFQGGL+PHNYCLPVLKRE HRQA+VSAVTSGS
Sbjct: 212 VRFVESCNEGSVAATVTPQHLVLNRNSLFQGGLQPHNYCLPVLKRETHRQAIVSAVTSGS 271

Query: 241 RKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDF 300
           RKFFLGTDSAPHER RKEC CGCAGIYNAPVALSLYAKVFEE GALDKLEAFTSFNGPDF
Sbjct: 272 RKFFLGTDSAPHERRRKECPCGCAGIYNAPVALSLYAKVFEEAGALDKLEAFTSFNGPDF 331

Query: 301 YGLPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQPS 344
           YGLPRNTSKIKL+K PWKVPE++SFSFGDI+PMFAG TL+W PS
Sbjct: 332 YGLPRNTSKIKLSKTPWKVPESYSFSFGDIVPMFAGETLDWLPS 375

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302143305|emb|CBI21866.3| unnamed protein product [Vitis vinifera]

 Score =  641 bits (1653), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 302/344 (87%), Positives = 326/344 (94%)

Query: 1   MELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILK 60
           MEL+LTQPDDWHLHLRDGDLL+AVV HS SH+GR IVMPNLKPPITTTAAAVAYRESILK
Sbjct: 1   MELSLTQPDDWHLHLRDGDLLEAVVSHSASHFGRGIVMPNLKPPITTTAAAVAYRESILK 60

Query: 61  ALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCV 120
           ALPA+ +FTPLMTLYLTD TSP+EIKLAR +GVVFAVKLYPAGATTNSQDGVTDLFGKC+
Sbjct: 61  ALPANCDFTPLMTLYLTDKTSPNEIKLARNSGVVFAVKLYPAGATTNSQDGVTDLFGKCL 120

Query: 121 HVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDA 180
            VLEEMVEQNMPLLVHGEVT+P VD+FDREKVFI+T+L+PLIQ+ P+LKVVMEHITTMDA
Sbjct: 121 PVLEEMVEQNMPLLVHGEVTNPEVDVFDREKVFIETVLRPLIQKFPRLKVVMEHITTMDA 180

Query: 181 VKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGS 240
           V+FVESC EG VAATVTPQHLVLNRN+LFQGGL+PHNYCLPVLKRE HRQA+VSAVTSGS
Sbjct: 181 VRFVESCNEGSVAATVTPQHLVLNRNSLFQGGLQPHNYCLPVLKRETHRQAIVSAVTSGS 240

Query: 241 RKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDF 300
           RKFFLGTDSAPHER RKEC CGCAGIYNAPVALSLYAKVFEE GALDKLEAFTSFNGPDF
Sbjct: 241 RKFFLGTDSAPHERRRKECPCGCAGIYNAPVALSLYAKVFEEAGALDKLEAFTSFNGPDF 300

Query: 301 YGLPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQPS 344
           YGLPRNTSKIKL+K PWKVPE++SFSFGDI+PMFAG TL+W PS
Sbjct: 301 YGLPRNTSKIKLSKTPWKVPESYSFSFGDIVPMFAGETLDWLPS 344

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224095475|ref|XP_002310399.1| predicted protein [Populus trichocarpa] gi|222853302|gb|EEE90849.1| predicted protein [Populus trichocarpa]

 Score =  639 bits (1649), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 301/346 (86%), Positives = 326/346 (94%)

Query: 1   MELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILK 60
           MELT+TQPDDWHLHLRDG+LL+AV PHS + +GRAIVMPNLKPPIT+TA A AYRESILK
Sbjct: 1   MELTITQPDDWHLHLRDGELLQAVAPHSANFFGRAIVMPNLKPPITSTAVAAAYRESILK 60

Query: 61  ALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCV 120
           ALPA S+F+PLMTLYLTDTTSP EIKLAR++GVVFAVKLYPAGATTNSQDGVTDLFGKC+
Sbjct: 61  ALPADSDFSPLMTLYLTDTTSPREIKLARESGVVFAVKLYPAGATTNSQDGVTDLFGKCL 120

Query: 121 HVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDA 180
            VLEEM EQNMPLLVHGEVTDP VD+FDREKVFIDTILQPLIQRLPQLKVVMEHITTM+A
Sbjct: 121 PVLEEMAEQNMPLLVHGEVTDPNVDVFDREKVFIDTILQPLIQRLPQLKVVMEHITTMEA 180

Query: 181 VKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGS 240
           V+FVESC  G VAATVTPQHL+LNRNA+FQGGL+PHNYCLPVLKREIHRQA+VSAVTSG+
Sbjct: 181 VRFVESCSYGSVAATVTPQHLLLNRNAIFQGGLQPHNYCLPVLKREIHRQAIVSAVTSGN 240

Query: 241 RKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDF 300
           +KFFLGTDSAPHE+ RKEC CGCAGIYNAPVA+SLYAKVFEE GALDKLEAFTSFNGPDF
Sbjct: 241 KKFFLGTDSAPHEKRRKECPCGCAGIYNAPVAISLYAKVFEEAGALDKLEAFTSFNGPDF 300

Query: 301 YGLPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI 346
           YGLPRNTSKIKLT+ PWKVPE+FSFSFGDI+PM AG TLEWQPS I
Sbjct: 301 YGLPRNTSKIKLTRTPWKVPESFSFSFGDIVPMSAGETLEWQPSSI 346

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363806922|ref|NP_001242305.1| uncharacterized protein LOC100815210 [Glycine max] gi|255636147|gb|ACU18416.1| unknown [Glycine max]

 Score =  623 bits (1607), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 291/342 (85%), Positives = 317/342 (92%)

Query: 1   MELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILK 60
           MELT+TQPDDWHLHLRDG LL+AV+PHS  H+GRAIVMPNLKPPITTT+AAVAYRESILK
Sbjct: 1   MELTITQPDDWHLHLRDGSLLEAVLPHSAKHFGRAIVMPNLKPPITTTSAAVAYRESILK 60

Query: 61  ALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCV 120
           A+P  SNFTPLM+LYLTD T+PDEIKLA+K+G+V+ VKLYPAGATTNSQDGVTDLFG C 
Sbjct: 61  AIPKDSNFTPLMSLYLTDVTTPDEIKLAKKSGLVYGVKLYPAGATTNSQDGVTDLFGNCF 120

Query: 121 HVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDA 180
            VLEEM EQN PLLVHGEVTD  VDIFDREKVFI+TIL PLIQRLPQLKVVMEHITT DA
Sbjct: 121 SVLEEMAEQNSPLLVHGEVTDSNVDIFDREKVFIETILMPLIQRLPQLKVVMEHITTADA 180

Query: 181 VKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGS 240
           VKFVESCKEG+VAATVTPQHL+LNRNALFQGGL+PHNYCLPVLKREIHRQA+VSAVTSGS
Sbjct: 181 VKFVESCKEGYVAATVTPQHLLLNRNALFQGGLQPHNYCLPVLKREIHRQAIVSAVTSGS 240

Query: 241 RKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDF 300
           ++FFLGTDSAPH+R +KEC+CGCAGIYN+PVALSLYAKVFEE GALDKLEAFTSFNGPDF
Sbjct: 241 KRFFLGTDSAPHDRRKKECSCGCAGIYNSPVALSLYAKVFEEAGALDKLEAFTSFNGPDF 300

Query: 301 YGLPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQ 342
           YGLPRN SKIKL K PWKVP+  SF FGDI+PMFAG TLEW+
Sbjct: 301 YGLPRNKSKIKLRKAPWKVPDYLSFPFGDIVPMFAGETLEWE 342

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297803826|ref|XP_002869797.1| mitochondrial dihydroorotase [Arabidopsis lyrata subsp. lyrata] gi|297315633|gb|EFH46056.1| mitochondrial dihydroorotase [Arabidopsis lyrata subsp. lyrata]

 Score =  620 bits (1598), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 288/343 (83%), Positives = 319/343 (93%)

Query: 1   MELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILK 60
           MELT+TQPDDWHLHLRD DLL AVVPHS S + RAIVMPNLKPP+TTTAAAVAYR+SI+K
Sbjct: 34  MELTITQPDDWHLHLRDADLLHAVVPHSASIFKRAIVMPNLKPPVTTTAAAVAYRDSIMK 93

Query: 61  ALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCV 120
           ALP  S+F PLMTLYLTD T PDEIKLAR++GVV+AVKLYPAGATTNSQDGVTDLFGKC+
Sbjct: 94  ALPYGSSFDPLMTLYLTDKTQPDEIKLARESGVVYAVKLYPAGATTNSQDGVTDLFGKCL 153

Query: 121 HVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDA 180
            VLEEMV+QNMPLLVHGEVTDP +D+FDREK+FI+T+LQPLIQRLPQLKVVMEHITTMDA
Sbjct: 154 PVLEEMVKQNMPLLVHGEVTDPSIDVFDREKIFIETVLQPLIQRLPQLKVVMEHITTMDA 213

Query: 181 VKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGS 240
           V FVESCKEG V ATVTPQHL+LNRNALFQGGL+PHNYCLPVLKREIHR+A+V AVTSGS
Sbjct: 214 VNFVESCKEGSVGATVTPQHLLLNRNALFQGGLQPHNYCLPVLKREIHREAIVKAVTSGS 273

Query: 241 RKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDF 300
           +KFFLGTDSAPHER RKE +CGCAGIY+APVALSLYAKVF+E GALDKLEAFTSFNGPDF
Sbjct: 274 KKFFLGTDSAPHERTRKESSCGCAGIYSAPVALSLYAKVFDEAGALDKLEAFTSFNGPDF 333

Query: 301 YGLPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQP 343
           YGLPRN+SK+ L K PWKVP+ F+FSFG+I+PMFAG TL+WQP
Sbjct: 334 YGLPRNSSKVTLKKSPWKVPDVFNFSFGEIVPMFAGETLQWQP 376

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|146447410|gb|ABQ41358.1| mitochondrial dihydroorotase [Brassica napus]

 Score =  619 bits (1595), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 288/339 (84%), Positives = 317/339 (93%)

Query: 1   MELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILK 60
           M LT+TQPDDWHLHLRDGDLL+AVVPHSVSH+ RAIVMPNLKPP+T+TAAA+ YRESI+K
Sbjct: 36  MGLTITQPDDWHLHLRDGDLLQAVVPHSVSHFRRAIVMPNLKPPVTSTAAAITYRESIMK 95

Query: 61  ALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCV 120
           ALP  S+F PLMTLYLTD T PDEIKLAR++GVV+AVKLYPAGATTNSQDGVTDLFGKC+
Sbjct: 96  ALPTGSSFDPLMTLYLTDKTHPDEIKLARESGVVYAVKLYPAGATTNSQDGVTDLFGKCL 155

Query: 121 HVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDA 180
            VLEEMV+QNMPLLVHGEVTDP +D+FDREK+FI+T+LQPLIQRLPQLKVVMEHITTMDA
Sbjct: 156 PVLEEMVKQNMPLLVHGEVTDPSIDVFDREKIFIETVLQPLIQRLPQLKVVMEHITTMDA 215

Query: 181 VKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGS 240
           V FVESCKEGFV ATVTPQHL+LNRNALFQGGL+PHNYCLPVLKREIHR+A+V AVTSGS
Sbjct: 216 VNFVESCKEGFVGATVTPQHLLLNRNALFQGGLQPHNYCLPVLKREIHREAIVKAVTSGS 275

Query: 241 RKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDF 300
           +KFFLGTDSAPHER RKE +CGCAGIY+APVALSLYAKVF+E G+LDKLEAFTSFNGPDF
Sbjct: 276 KKFFLGTDSAPHERRRKESSCGCAGIYSAPVALSLYAKVFDEAGSLDKLEAFTSFNGPDF 335

Query: 301 YGLPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTL 339
           YGLPRN+SKI L K PWKVPE  SFSFG+IIPMFAG TL
Sbjct: 336 YGLPRNSSKITLKKAPWKVPEVLSFSFGEIIPMFAGETL 374

Source: Brassica napus

Species: Brassica napus

Genus: Brassica

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449494658|ref|XP_004159611.1| PREDICTED: dihydroorotase, mitochondrial-like [Cucumis sativus]

 Score =  618 bits (1593), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 288/343 (83%), Positives = 321/343 (93%)

Query: 1   MELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILK 60
           M+LTLTQPDDWHLHLRDGDLLKAV+PHS S +GRAIVMPNLKPP+TTTAAAVAYR+SILK
Sbjct: 32  MQLTLTQPDDWHLHLRDGDLLKAVLPHSASTFGRAIVMPNLKPPVTTTAAAVAYRDSILK 91

Query: 61  ALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCV 120
           ALP++SNF PLMTLYLTDT SP+EIKLARK+G V+AVKLYPAGATTNSQDGVTDLFGKC+
Sbjct: 92  ALPSNSNFVPLMTLYLTDTMSPNEIKLARKSGAVYAVKLYPAGATTNSQDGVTDLFGKCL 151

Query: 121 HVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDA 180
            VLEEMVEQ+MPLLVHGEVT+  VD+FDREKVFI+T+L+PLI+RLP+LKVVMEHITT DA
Sbjct: 152 PVLEEMVEQDMPLLVHGEVTNSDVDMFDREKVFIETVLKPLIERLPKLKVVMEHITTADA 211

Query: 181 VKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGS 240
            KFV SC+   +AATVTPQHL+LNRN+LFQGGL+PHNYCLPVLKRE HRQA+VSAVTSGS
Sbjct: 212 AKFVLSCEHALLAATVTPQHLLLNRNSLFQGGLQPHNYCLPVLKRETHRQAIVSAVTSGS 271

Query: 241 RKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDF 300
           +KFFLGTDSAPHER RKE +CGCAGIY+AP+ALSLYAKVFEE GALDKLEAFTSFNGPDF
Sbjct: 272 KKFFLGTDSAPHERKRKESSCGCAGIYSAPIALSLYAKVFEEAGALDKLEAFTSFNGPDF 331

Query: 301 YGLPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQP 343
           YGLPRNTSKI L K PW+VP++FSFSFGDI+PMFAG TLEWQP
Sbjct: 332 YGLPRNTSKITLQKAPWQVPKSFSFSFGDIVPMFAGETLEWQP 374

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357474373|ref|XP_003607471.1| Dihydroorotase [Medicago truncatula] gi|355508526|gb|AES89668.1| Dihydroorotase [Medicago truncatula]

 Score =  617 bits (1591), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 286/346 (82%), Positives = 320/346 (92%)

Query: 1   MELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILK 60
           MELT+ QPDD+HLHLRDG LL+AV PHS  H+GRAI+MPNLKPPITTT++A++YRESILK
Sbjct: 1   MELTIVQPDDFHLHLRDGALLEAVTPHSAKHFGRAIIMPNLKPPITTTSSAISYRESILK 60

Query: 61  ALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCV 120
           A+P +SNFTPLMTLYLTD T+P+EI+LA+K+G V+ VKLYPAGATTNSQDGVTDLFG C 
Sbjct: 61  AIPKTSNFTPLMTLYLTDATTPNEIQLAKKSGFVYGVKLYPAGATTNSQDGVTDLFGNCY 120

Query: 121 HVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDA 180
            VLEEMVEQ +PLLVHGEVT+P VDIFDREKVFI+TIL+PLIQRLPQLKVVMEHITTMDA
Sbjct: 121 SVLEEMVEQGLPLLVHGEVTNPEVDIFDREKVFIETILEPLIQRLPQLKVVMEHITTMDA 180

Query: 181 VKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGS 240
           VKFVESCKEG+VAATVTPQH++LNRNALFQGGL+PHNYCLPVLKREIHRQA+VSA+TSGS
Sbjct: 181 VKFVESCKEGYVAATVTPQHILLNRNALFQGGLQPHNYCLPVLKREIHRQAIVSAITSGS 240

Query: 241 RKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDF 300
           R+FFLGTDSAPH+R +KE ACGCAGIYN+PVALSLYAKVFEE GALDKLEAFTSFNGPDF
Sbjct: 241 RRFFLGTDSAPHDRRKKESACGCAGIYNSPVALSLYAKVFEEAGALDKLEAFTSFNGPDF 300

Query: 301 YGLPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI 346
           YG+PRN SKIKL K PW+VPE  SF FGDIIPMFAG TLEW+  LI
Sbjct: 301 YGIPRNKSKIKLRKSPWRVPECLSFPFGDIIPMFAGETLEWEALLI 346

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449437838|ref|XP_004136697.1| PREDICTED: dihydroorotase, mitochondrial-like [Cucumis sativus]

 Score =  617 bits (1590), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 287/343 (83%), Positives = 321/343 (93%)

Query: 1   MELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILK 60
           M+LTLTQPDDWHLHLRDGDLLKAV+PHS S +GRAIVMPNLKPP+TTTAAAVAYR+SILK
Sbjct: 32  MQLTLTQPDDWHLHLRDGDLLKAVLPHSASTFGRAIVMPNLKPPVTTTAAAVAYRDSILK 91

Query: 61  ALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCV 120
           ALP++SNF PLMTLYLTDT SP+EIKLARK+G V+AVKLYPAGATTNSQDGVTDLFGKC+
Sbjct: 92  ALPSNSNFVPLMTLYLTDTMSPNEIKLARKSGAVYAVKLYPAGATTNSQDGVTDLFGKCL 151

Query: 121 HVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDA 180
            VLEEMVEQ+MPLLVHGEVT+  VD+FDREKVFI+T+L+PLI+RLP+LKVVMEHITT DA
Sbjct: 152 PVLEEMVEQDMPLLVHGEVTNSDVDMFDREKVFIETVLKPLIERLPKLKVVMEHITTADA 211

Query: 181 VKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGS 240
            KFV SC+   +AATVTPQHL+LNRN+LFQGGL+PHNYCLPVLKRE HRQA+VSAVTSGS
Sbjct: 212 AKFVLSCEHALLAATVTPQHLLLNRNSLFQGGLQPHNYCLPVLKRETHRQAIVSAVTSGS 271

Query: 241 RKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDF 300
           +KFFLGTDSAPHER RKE +CGCAGIY+AP+ALSLYAKVFEE GALDKLE+FTSFNGPDF
Sbjct: 272 KKFFLGTDSAPHERKRKESSCGCAGIYSAPIALSLYAKVFEEAGALDKLESFTSFNGPDF 331

Query: 301 YGLPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQP 343
           YGLPRNTSKI L K PW+VP++FSFSFGDI+PMFAG TLEWQP
Sbjct: 332 YGLPRNTSKITLQKAPWQVPKSFSFSFGDIVPMFAGETLEWQP 374

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	346
TAIR|locus:2127168	377	PYR4 "pyrimidin 4" [Arabidopsi	0.991	0.909	0.790	1.6e-150
UNIPROTKB|Q9KL24	342	pyrC "Dihydroorotase" [Vibrio	0.965	0.976	0.580	4.9e-101
TIGR_CMR|VC_A0925	342	VC_A0925 "dihydroorotase" [Vib	0.965	0.976	0.580	4.9e-101
TIGR_CMR|SO_3695	343	SO_3695 "dihydroorotase, homod	0.971	0.979	0.564	1.9e-99
UNIPROTKB|P05020	348	pyrC "PyrC" [Escherichia coli	0.973	0.968	0.557	3.7e-96
TIGR_CMR|CPS_2613	355	CPS_2613 "dihydroorotase, homo	0.973	0.949	0.541	3.8e-94
TIGR_CMR|SPO_2653	346	SPO_2653 "dihydroorotase, homo	0.976	0.976	0.539	1.5e-92
TIGR_CMR|CBU_1703	351	CBU_1703 "dihydroorotase, homo	0.976	0.962	0.523	5.7e-91
TIGR_CMR|CJE_0309	331	CJE_0309 "dihydroorotase, homo	0.939	0.981	0.376	1.1e-50
POMBASE|SPAC16.03c	337	ura2 "dihydroorotase Ura2 (pre	0.950	0.976	0.394	7.4e-50

TAIR|locus:2127168 PYR4 "pyrimidin 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 1469 (522.2 bits), Expect = 1.6e-150, P = 1.6e-150
 Identities = 271/343 (79%), Positives = 307/343 (89%)

Query:     1 MELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILK 60
             MELT+TQPDDWHLHLRDGDLL AVVPHS S++ RAIVMPNLKPP+T+TAAA+ YR+ I+K
Sbjct:    33 MELTITQPDDWHLHLRDGDLLHAVVPHSASNFKRAIVMPNLKPPVTSTAAAIIYRKFIMK 92

Query:    61 ALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCV 120
             ALP+ S+F PLMTLYLTD T P+EI+LAR++GVV+AVKLYPAGATTNSQDGVTDLFGKC+
Sbjct:    93 ALPSESSFDPLMTLYLTDKTLPEEIRLARESGVVYAVKLYPAGATTNSQDGVTDLFGKCL 152

Query:   121 HVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTXXXXXXXXXXXXKVVMEHITTMDA 180
              VLEEMV+QNMPLLVHGEVTDP +D+FDREK+FI+T            KVVMEHITTMDA
Sbjct:   153 PVLEEMVKQNMPLLVHGEVTDPSIDVFDREKIFIETVLQPLIQRLPQLKVVMEHITTMDA 212

Query:   181 VKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGS 240
             V FVESCKEG V ATVTPQHL+LNRNALFQGGL+PHNYCLPVLKREIHR+A+V AVTSGS
Sbjct:   213 VNFVESCKEGSVGATVTPQHLLLNRNALFQGGLQPHNYCLPVLKREIHREAIVKAVTSGS 272

Query:   241 RKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDF 300
             +KFFLGTDSAPHER RKE +CGCAGIY+AP+ALSLYAKVF+E GALDKLEAFTSFNGPDF
Sbjct:   273 KKFFLGTDSAPHERSRKESSCGCAGIYSAPIALSLYAKVFDEAGALDKLEAFTSFNGPDF 332

Query:   301 YGLPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQP 343
             YGLPRN+SKI L K PWKVP+ F+F FG+I+PMFAG TL+WQP
Sbjct:   333 YGLPRNSSKITLKKSPWKVPDVFNFPFGEIVPMFAGETLQWQP 375

GO:0004151 "dihydroorotase activity" evidence=IEA;IGI;ISS

GO:0016787 "hydrolase activity" evidence=IEA

GO:0016812 "hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides" evidence=IEA

GO:0019856 "pyrimidine nucleobase biosynthetic process" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

UNIPROTKB|Q9KL24 pyrC "Dihydroorotase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 1002 (357.8 bits), Expect = 4.9e-101, P = 4.9e-101
 Identities = 198/341 (58%), Positives = 241/341 (70%)

Query:     3 LTLTQPDDWHLHLRDGDLLKAVVPHSVSHY-GRAIVMPNLKPPITTTAAAVAYRESILKA 61
             LT+T+PDDWH+HLRDGD+L   V   +S Y GRA++MPN  PP+TTT  A+AYRE I+ A
Sbjct:     4 LTITRPDDWHVHLRDGDVLADTV-RDISRYNGRALIMPNTVPPVTTTEMALAYRERIMAA 62

Query:    62 LPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVH 121
              P  ++F PLM LYLTD TSP+EI+ A+ +G V A KLYPAGATTNS  GVT    K ++
Sbjct:    63 QP-QAHFEPLMALYLTDNTSPEEIRKAKASGKVVAAKLYPAGATTNSDSGVTS--AKNIY 119

Query:   122 -VLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTXXXXXXXXXXXXKVVMEHITTMDA 180
              VL+ M E  M LLVHGEVT   VDIFDREK F+DT            K+V+EHITT DA
Sbjct:   120 PVLQAMQEVGMLLLVHGEVTTHEVDIFDREKTFLDTVLAPIVNDFPQLKIVLEHITTADA 179

Query:   181 VKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGS 240
             V FV+   +  VAAT+T  HL+ NRN +  GG+RPH YCLP+LKR  H+ A+V+A TSGS
Sbjct:   180 VTFVQQAGDN-VAATITAHHLLFNRNHMLVGGIRPHFYCLPILKRATHQHALVAAATSGS 238

Query:   241 RKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDF 300
             +KFFLGTDSAPH +GRKE ACGCAG Y A  AL LYA+VFE+ G L+ LEAF SFNGPDF
Sbjct:   239 KKFFLGTDSAPHAKGRKEAACGCAGSYTAHAALELYAEVFEKEGKLENLEAFASFNGPDF 298

Query:   301 YGLPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEW 341
             YGLPRN   + LTK  W V E+  F    ++P+ AG  +EW
Sbjct:   299 YGLPRNQETVTLTKQAWPVAESMPFGSDIVVPIRAGENIEW 339

GO:0004151 "dihydroorotase activity" evidence=ISS

GO:0009220 "pyrimidine ribonucleotide biosynthetic process" evidence=ISS

TIGR_CMR|VC_A0925 VC_A0925 "dihydroorotase" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 1002 (357.8 bits), Expect = 4.9e-101, P = 4.9e-101
 Identities = 198/341 (58%), Positives = 241/341 (70%)

Query:     3 LTLTQPDDWHLHLRDGDLLKAVVPHSVSHY-GRAIVMPNLKPPITTTAAAVAYRESILKA 61
             LT+T+PDDWH+HLRDGD+L   V   +S Y GRA++MPN  PP+TTT  A+AYRE I+ A
Sbjct:     4 LTITRPDDWHVHLRDGDVLADTV-RDISRYNGRALIMPNTVPPVTTTEMALAYRERIMAA 62

Query:    62 LPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVH 121
              P  ++F PLM LYLTD TSP+EI+ A+ +G V A KLYPAGATTNS  GVT    K ++
Sbjct:    63 QP-QAHFEPLMALYLTDNTSPEEIRKAKASGKVVAAKLYPAGATTNSDSGVTS--AKNIY 119

Query:   122 -VLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTXXXXXXXXXXXXKVVMEHITTMDA 180
              VL+ M E  M LLVHGEVT   VDIFDREK F+DT            K+V+EHITT DA
Sbjct:   120 PVLQAMQEVGMLLLVHGEVTTHEVDIFDREKTFLDTVLAPIVNDFPQLKIVLEHITTADA 179

Query:   181 VKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGS 240
             V FV+   +  VAAT+T  HL+ NRN +  GG+RPH YCLP+LKR  H+ A+V+A TSGS
Sbjct:   180 VTFVQQAGDN-VAATITAHHLLFNRNHMLVGGIRPHFYCLPILKRATHQHALVAAATSGS 238

Query:   241 RKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDF 300
             +KFFLGTDSAPH +GRKE ACGCAG Y A  AL LYA+VFE+ G L+ LEAF SFNGPDF
Sbjct:   239 KKFFLGTDSAPHAKGRKEAACGCAGSYTAHAALELYAEVFEKEGKLENLEAFASFNGPDF 298

Query:   301 YGLPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEW 341
             YGLPRN   + LTK  W V E+  F    ++P+ AG  +EW
Sbjct:   299 YGLPRNQETVTLTKQAWPVAESMPFGSDIVVPIRAGENIEW 339

GO:0004151 "dihydroorotase activity" evidence=ISS

GO:0009220 "pyrimidine ribonucleotide biosynthetic process" evidence=ISS

TIGR_CMR|SO_3695 SO_3695 "dihydroorotase, homodimeric type" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 987 (352.5 bits), Expect = 1.9e-99, P = 1.9e-99
 Identities = 193/342 (56%), Positives = 236/342 (69%)

Query:     3 LTLTQPDDWHLHLRDGDLLKAVVPHSVSHY-GRAIVMPNLKPPITTTAAAVAYRESILKA 61
             LT+T+PDDWH+HLRDG  L   V   +S Y GRAIVMPNL PP   T  A+AY + I   
Sbjct:     4 LTITRPDDWHIHLRDGAQLTDTV-RDISRYMGRAIVMPNLVPPAIDTETALAYYDRIKAR 62

Query:    62 LPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVH 121
             +PA S F PLM LYLTD TSPDEI+ A+ +G VFA KLYPAGATTNS  GVTDL  K ++
Sbjct:    63 VPAGSQFEPLMVLYLTDKTSPDEIRKAKASGKVFAAKLYPAGATTNSDSGVTDL--KNIY 120

Query:   122 -VLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTXXXXXXXXXXXXKVVMEHITTMDA 180
               LE M E  M  LVHGEVTD  +DIFDRE+VFI+             K+V+EHITT DA
Sbjct:   121 PALEAMQEVGMLFLVHGEVTDSSIDIFDRERVFIENILSKIVTDFPNLKIVLEHITTKDA 180

Query:   181 VKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGS 240
             V FV    +  VAAT+T  HL+ NRN +  GG+RPH YCLP+LKR  H+QA+++A  SG+
Sbjct:   181 VDFVTQASDN-VAATITAHHLLYNRNHMLAGGIRPHFYCLPILKRNTHQQALLAAAASGN 239

Query:   241 RKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDF 300
             +KFFLGTDSAPH + RKE ACGCAG Y A  A+ LYA+ FE + ALDKLEAF SFNGPDF
Sbjct:   240 KKFFLGTDSAPHAKDRKEAACGCAGSYTAHAAIELYAEAFESVNALDKLEAFASFNGPDF 299

Query:   301 YGLPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQ 342
             Y LPRN+  I L K  W +P ++     +++P+ AG  ++WQ
Sbjct:   300 YNLPRNSDTITLVKKAWDIPASYPLGDTNVVPIRAGEQIDWQ 341

GO:0004151 "dihydroorotase activity" evidence=ISS

GO:0009220 "pyrimidine ribonucleotide biosynthetic process" evidence=ISS

UNIPROTKB|P05020 pyrC "PyrC" [Escherichia coli K-12 (taxid:83333)]

 Score = 956 (341.6 bits), Expect = 3.7e-96, P = 3.7e-96
 Identities = 189/339 (55%), Positives = 230/339 (67%)

Query:     3 LTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKAL 62
             L + +PDDWHLHLRDGD+LK VVP++   YGRAIVMPNL PP+TT  AAVAYR+ IL A+
Sbjct:     8 LKIRRPDDWHLHLRDGDMLKTVVPYTSEIYGRAIVMPNLAPPVTTVEAAVAYRQRILDAV 67

Query:    63 PASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHV 122
             PA  +FTPLMT YLTD+  P+E++     GV  A KLYPA ATTNS  GVT +    + V
Sbjct:    68 PAGHDFTPLMTCYLTDSLDPNELERGFNEGVFTAAKLYPANATTNSSHGVTSI-DAIMPV 126

Query:   123 LEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTXXXXXXXXXXXXKVVMEHITTMDAVK 182
             LE M +  MPLLVHGEVT   +DIFDRE  FI++            KVV EHITT DA  
Sbjct:   127 LERMEKIGMPLLVHGEVTHADIDIFDREARFIESVMEPLRQRLTALKVVFEHITTKDAAD 186

Query:   183 FVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRK 242
             +V    E  +AAT+TPQHL+ NRN +  GG+RPH YCLP+LKR IH+QA+   V SG  +
Sbjct:   187 YVRDGNER-LAATITPQHLMFNRNHMLVGGVRPHLYCLPILKRNIHQQALRELVASGFNR 245

Query:   243 FFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYG 302
              FLGTDSAPH R RKE +CGCAG +NAP AL  YA VFEEM AL   EAF S NGP FYG
Sbjct:   246 VFLGTDSAPHARHRKESSCGCAGCFNAPTALGSYATVFEEMNALQHFEAFCSVNGPQFYG 305

Query:   303 LPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEW 341
             LP N + I+L +   +V E+ + +   ++P  AG T+ W
Sbjct:   306 LPVNDTFIELVREEQQVAESIALTDDTLVPFLAGETVRW 344

GO:0046872 "metal ion binding" evidence=IEA

GO:0044205 "'de novo' UMP biosynthetic process" evidence=IEA

GO:0006207 "'de novo' pyrimidine nucleobase biosynthetic process" evidence=IMP

GO:0008270 "zinc ion binding" evidence=IDA

GO:0004151 "dihydroorotase activity" evidence=IEA;IDA

GO:0006221 "pyrimidine nucleotide biosynthetic process" evidence=IEA

TIGR_CMR|CPS_2613 CPS_2613 "dihydroorotase, homodimeric type" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 937 (334.9 bits), Expect = 3.8e-94, P = 3.8e-94
 Identities = 184/340 (54%), Positives = 233/340 (68%)

Query:     3 LTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKAL 62
             LT+ +PDDWH+HLRDG +LK  V     ++GRAIVMPNL PP+T  A A +Y + I+ A 
Sbjct:    16 LTIARPDDWHVHLRDGAVLKNTVADISRYFGRAIVMPNLVPPVTDAALAESYYQRIMAAA 75

Query:    63 PASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHV 122
             P S++F PLM LYLTD TS  +I  A+++G+V+A KLYPAGATTNS  GVTD+      V
Sbjct:    76 P-SAHFKPLMVLYLTDNTSAQDIIEAKESGLVYAAKLYPAGATTNSSSGVTDV-ANLTDV 133

Query:   123 LEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTXXXXXXXXXXXXKVVMEHITTMDAVK 182
                M    MPLLVHGEVT   +DIFDRE+VF+DT            KVV+EHITT +AV 
Sbjct:   134 FAAMQSVEMPLLVHGEVTAADIDIFDREQVFVDTILKPLVANFPDLKVVLEHITTKNAVD 193

Query:   183 FVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRK 242
             FV++  +  V AT+T  HL+ NRN +  GG+RPH +CLP+LKR  H+QA++ A TSG +K
Sbjct:   194 FVKTAGDN-VGATITVHHLLFNRNHMLVGGIRPHFFCLPILKRNTHQQALIEAATSGDKK 252

Query:   243 FFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYG 302
             FFLGTDSAPH +  KE ACGCAG+Y+A  A+ LYA+VFE+  ALDKLEAF S NG +FY 
Sbjct:   253 FFLGTDSAPHAQHAKESACGCAGVYSAHAAIELYAEVFEQENALDKLEAFASLNGANFYQ 312

Query:   303 LPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQ 342
             LP +T KI L K  WKVP   SF    ++P+ A   + WQ
Sbjct:   313 LPISTDKITLVKKAWKVPATMSFGDDVVVPVRADEEILWQ 352

GO:0004151 "dihydroorotase activity" evidence=ISS

GO:0009220 "pyrimidine ribonucleotide biosynthetic process" evidence=ISS

TIGR_CMR|SPO_2653 SPO_2653 "dihydroorotase, homodimeric type" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 922 (329.6 bits), Expect = 1.5e-92, P = 1.5e-92
 Identities = 184/341 (53%), Positives = 223/341 (65%)

Query:     3 LTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKAL 62
             LT+ +PDDWHLHLRDG +L AV+P +  H+ RAIVMPNL PP+ T A A AYR+ IL  L
Sbjct:     5 LTIRRPDDWHLHLRDGAMLAAVLPETARHFARAIVMPNLVPPVVTGAQAAAYRDRILATL 64

Query:    63 PASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHV 122
             P   NF PLMTLYLT+ T PD++  A  +G++ +VKLYPAGATTNS  GV D F K   V
Sbjct:    65 PKGMNFEPLMTLYLTEQTDPDDLAAAHTSGLITSVKLYPAGATTNSASGVKD-FDKVRPV 123

Query:   123 LEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTXXXXXXXXXXXXKVVMEHITTMDAVK 182
             LE M E   PL VHGEVTD  +DIFDRE VFID             +V+MEHITT D   
Sbjct:   124 LERMAEIGCPLCVHGEVTDREIDIFDREAVFIDRVLDPIRRATPGLRVIMEHITTKDGAD 183

Query:   183 FVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRK 242
             +V +  EG + AT+T QHL+ +RN +  GG+RPH YCLP+LKR  HR+A+V+A TSG  +
Sbjct:   184 YVAANPEG-LGATITVQHLMFDRNDMLVGGMRPHYYCLPILKRRHHREALVAAATSGDAR 242

Query:   243 FFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYG 302
             +FLGTDSAPH    KE  C  AG + AP+ALS  A VFEE GALDKLE FTS NGP FYG
Sbjct:   243 YFLGTDSAPHPTHAKEAECCAAGCFTAPIALSCLAHVFEEAGALDKLEGFTSLNGPAFYG 302

Query:   303 LPRNTSKIKLTKI-PWKVPEAFSFSFGDIIPMFAGNTLEWQ 342
             LP N   I L+K  P  +P+        +     G  L W+
Sbjct:   303 LPVNADTITLSKADPLDIPKTLPAGEHTVTVFDPGVPLHWR 343

GO:0004151 "dihydroorotase activity" evidence=ISS

GO:0009220 "pyrimidine ribonucleotide biosynthetic process" evidence=ISS

TIGR_CMR|CBU_1703 CBU_1703 "dihydroorotase, homodimeric type" [Coxiella burnetii RSA 493 (taxid:227377)]

 Score = 907 (324.3 bits), Expect = 5.7e-91, P = 5.7e-91
 Identities = 179/342 (52%), Positives = 228/342 (66%)

Query:     2 ELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKA 61
             ++TL +PDDWH HLRDG  L   V    + + RAIVMPNL PPITT   A AY + I   
Sbjct:     6 KITLIRPDDWHCHLRDGSYLPRTVADIAAQFNRAIVMPNLVPPITTVQQAKAYYDRIKAH 65

Query:    62 LPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVH 121
             +P SSNF PLMTLYLT++T   EIK A+++G++ A KLYPAGATT+SQ GV DL  K ++
Sbjct:    66 VPKSSNFEPLMTLYLTESTPQQEIKAAQQSGIIVACKLYPAGATTHSQAGVKDL--KAIY 123

Query:   122 -VLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTXXXXXXXXXXXXKVVMEHITTMDA 180
              +LE M   ++PLL+HGEV D  VDIFDRE VFI+             ++V EHI+T  A
Sbjct:   124 TLLETMQSVDLPLLIHGEVVDYAVDIFDREAVFIERELLPLVETFPQLRIVFEHISTKIA 183

Query:   181 VKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGS 240
             V FV       + AT+TP HL+ NRN L  G +RPH YCLP+LK    + A++ A TSG+
Sbjct:   184 VDFVLEAPSK-LGATITPHHLLFNRNDLLSGSIRPHYYCLPILKTSEDQMALIQAATSGN 242

Query:   241 RKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDF 300
              KFFLGTDSAPH + +K+  CG AGIYNAP A++LYA++F    ALDKLE F S  G +F
Sbjct:   243 PKFFLGTDSAPHSQTKKQSICGSAGIYNAPAAIALYAEIFASQNALDKLEGFASRFGAEF 302

Query:   301 YGLPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQ 342
             YGLP N S+I L   PW+V E+  F    ++P+FAG TL+WQ
Sbjct:   303 YGLPLNNSQITLIHQPWQVAESLPFGNELVVPLFAGQTLQWQ 344

GO:0004151 "dihydroorotase activity" evidence=ISS

GO:0009220 "pyrimidine ribonucleotide biosynthetic process" evidence=ISS

TIGR_CMR|CJE_0309 CJE_0309 "dihydroorotase, homodimeric type" [Campylobacter jejuni RM1221 (taxid:195099)]

 Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
 Identities = 129/343 (37%), Positives = 181/343 (52%)

Query:     3 LTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKAL 62
             + L  P D HLHLRD  +L+ V P S   +   ++MPNL  P+T      AY+E ILKA 
Sbjct:     1 MKLKNPLDMHLHLRDESMLELVAPFSAKDFKAGVIMPNLITPLTEIDVLKAYKERILKAC 60

Query:    63 PASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDL-FGKCVH 121
               + +FTPLMTL+  D    DE  L +    +FA+KLYPAG TTNS +G++     K   
Sbjct:    61 K-NEDFTPLMTLFFKDY---DEQFLEKAKDELFAIKLYPAGITTNSDNGISSFDIEKLKP 116

Query:   122 VLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTXXXXXXXXXXXXKVVMEHITTMDAV 181
              L  M E N+PLLVHGE  D ++D   RE  F               K+VMEHITT    
Sbjct:   117 TLITMSELNIPLLVHGETNDFVMD---REANFAKIYEKLAKNFPKL-KIVMEHITTKVLC 172

Query:   182 KFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSR 241
               ++  +  +  AT+T  HL++  + +  G + PH +C P+ KR   + A+     SG  
Sbjct:   173 DLLKDYENLY--ATITLHHLMITLDDVVGGKMDPHLFCKPIAKRYEDKDALCGLAFSGYE 230

Query:   242 KFFLGTDSAPHERGRKECACGCA-GIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDF 300
             K   G+DSAPH    KEC CGCA G+++APV L +  ++FE+      L+ F S N    
Sbjct:   231 KAMFGSDSAPHPLHTKEC-CGCAAGVFSAPVILPVLVELFEKYSNETNLQKFISDNACKI 289

Query:   301 YGLPRNTSKI-KLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQ 342
             + L     KI  L K  W+V +     +GD++P  AG TL ++
Sbjct:   290 HNLKFENDKIITLEKQEWQVAQ----KYGDVVPFMAGKTLNFK 328

GO:0004151 "dihydroorotase activity" evidence=ISS

GO:0009220 "pyrimidine ribonucleotide biosynthetic process" evidence=ISS

POMBASE|SPAC16.03c ura2 "dihydroorotase Ura2 (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
 Identities = 138/350 (39%), Positives = 191/350 (54%)

Query:     1 MELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAI--VMPNLKPPITTTAAAVAYRESI 58
             M L +    D H+HLR  ++LKAVVP +V+  G ++  VMPNL PPITT  A + Y++ I
Sbjct:     1 MSLKIPGLADMHVHLRQDNMLKAVVP-TVAEGGVSVAYVMPNLIPPITTVDACLQYKKEI 59

Query:    59 LKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGK 118
              +     S  T LM+LYL+  T+P+ I  A K G+   VK YP GATTNS+ GV + +  
Sbjct:    60 EQL---DSKTTYLMSLYLSPETTPEVIYEAAKKGIR-GVKSYPKGATTNSESGV-ESYEP 114

Query:   119 CVHVLEEMVEQNMPLLVHGEVTDPIVD--IFDREKVFIDTXXXXXXXXXXXXKVVMEHIT 176
                    M E  M L +HGEV  P  D  +F  E  F+ T            K+V+EH T
Sbjct:   115 FYPTFAAMQETGMILNIHGEVP-PSKDNTVFTAEPKFLPTLLDLHQRFPKL-KIVLEHCT 172

Query:   177 TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAV 236
             T DAV+ V++C E  VA T+T  HL L +   +Q    P+ +C PV K E  R+A++ A 
Sbjct:   173 TADAVEAVKACGES-VAGTITAHHLYLTQKD-WQDD--PYCFCKPVAKTERDRRALIEAA 228

Query:   237 TSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFN 296
             TS + KFF G+DSAPH R  K      AG++  P A S  A+VF++ G LD L+ F    
Sbjct:   229 TSKNPKFFFGSDSAPHPRSSKLKTPPAAGVFTQPFAASYLAEVFDKEGRLDALKDFACIF 288

Query:   297 GPDFYGLPRN--TSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQPS 344
             G  FY +P +   S I L K  ++VPE+ +    D++P      L+W  S
Sbjct:   289 GRKFYCIPLDFKESNIVLKKESFRVPESVA---NDLVPFHPNEVLQWHCS 335

GO:0004151 "dihydroorotase activity" evidence=ISS

GO:0005575 "cellular_component" evidence=ND

GO:0006221 "pyrimidine nucleotide biosynthetic process" evidence=ISS

GO:0019856 "pyrimidine nucleobase biosynthetic process" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
B2AH54	PYRC_CUPTR	3, ., 5, ., 2, ., 3	0.6070	0.9797	0.9854	yes	no
Q9K0D1	PYRC_NEIMB	3, ., 5, ., 2, ., 3	0.5823	0.9710	0.9767	yes	no
Q0AFI1	PYRC_NITEC	3, ., 5, ., 2, ., 3	0.6005	0.9797	0.9826	yes	no
Q0HRV9	PYRC_SHESR	3, ., 5, ., 2, ., 3	0.5689	0.9739	0.9825	yes	no
Q82WF3	PYRC_NITEU	3, ., 5, ., 2, ., 3	0.6151	0.9797	0.9713	yes	no
Q1LRD4	PYRC_RALME	3, ., 5, ., 2, ., 3	0.6093	0.9855	0.9912	yes	no
A1SX20	PYRC_PSYIN	3, ., 5, ., 2, ., 3	0.5663	0.9710	0.9795	yes	no
Q12NL3	PYRC_SHEDO	3, ., 5, ., 2, ., 3	0.5818	0.9826	0.9883	yes	no
P74438	PYRC_SYNY3	3, ., 5, ., 2, ., 3	0.6011	0.9768	0.9883	N/A	no
Q9JVD6	PYRC_NEIMA	3, ., 5, ., 2, ., 3	0.5823	0.9710	0.9767	yes	no
Q2SCE3	PYRC_HAHCH	3, ., 5, ., 2, ., 3	0.5652	0.9913	0.9942	yes	no
A9M2W6	PYRC_NEIM0	3, ., 5, ., 2, ., 3	0.5794	0.9710	0.9767	yes	no
B0JQJ1	PYRC_MICAN	3, ., 5, ., 2, ., 3	0.6117	0.9768	0.9825	yes	no
B4RJT2	PYRC_NEIG2	3, ., 5, ., 2, ., 3	0.5764	0.9710	0.9767	yes	no
B1XWS5	PYRC_LEPCP	3, ., 5, ., 2, ., 3	0.6029	0.9739	0.9796	yes	no
A7N655	PYRC_VIBHB	3, ., 5, ., 2, ., 3	0.5676	0.9739	0.9853	yes	no
B2TTK9	PYRC_SHIB3	3, ., 5, ., 2, ., 3	0.5781	0.9739	0.9683	yes	no
A4Y9S5	PYRC_SHEPC	3, ., 5, ., 2, ., 3	0.5630	0.9739	0.9825	yes	no
O04904	PYRC_ARATH	3, ., 5, ., 2, ., 3	0.8221	0.9913	0.9098	yes	no
A0L0B8	PYRC_SHESA	3, ., 5, ., 2, ., 3	0.5689	0.9739	0.9825	yes	no
Q5F9Y1	PYRC_NEIG1	3, ., 5, ., 2, ., 3	0.5794	0.9710	0.9767	yes	no
B0CF78	PYRC_ACAM1	3, ., 5, ., 2, ., 3	0.6041	0.9797	0.9826	yes	no
B1XI96	PYRC_SYNP2	3, ., 5, ., 2, ., 3	0.6334	0.9797	0.9797	yes	no
A4XS41	PYRC_PSEMY	3, ., 5, ., 2, ., 3	0.5659	0.9797	0.9741	yes	no
A1RGK8	PYRC_SHESW	3, ., 5, ., 2, ., 3	0.5601	0.9739	0.9825	yes	no
Q087W5	PYRC_SHEFN	3, ., 5, ., 2, ., 3	0.5818	0.9768	0.9797	yes	no
B7LT74	PYRC_ESCF3	3, ., 5, ., 2, ., 3	0.5840	0.9739	0.9683	yes	no
Q0AB36	PYRC_ALHEH	3, ., 5, ., 2, ., 3	0.5806	0.9797	0.9883	yes	no
B6I9D9	PYRC_ECOSE	3, ., 5, ., 2, ., 3	0.5781	0.9739	0.9683	yes	no
Q1GYZ0	PYRC_METFK	3, ., 5, ., 2, ., 3	0.6029	0.9768	0.9797	yes	no
Q0KEE2	PYRC_CUPNH	3, ., 5, ., 2, ., 3	0.5982	0.9797	0.9854	yes	no
Q8Y249	PYRC_RALSO	3, ., 5, ., 2, ., 3	0.6147	0.9768	0.9825	yes	no
A7ZKG7	PYRC_ECO24	3, ., 5, ., 2, ., 3	0.5781	0.9739	0.9683	yes	no
C1D672	PYRC_LARHH	3, ., 5, ., 2, ., 3	0.6334	0.9768	0.9797	yes	no
A1K3T5	PYRC_AZOSB	3, ., 5, ., 2, ., 3	0.5894	0.9768	0.9825	yes	no
B7LFZ6	PYRC_ECO55	3, ., 5, ., 2, ., 3	0.5781	0.9739	0.9683	yes	no
Q5P6Y5	PYRC_AROAE	3, ., 5, ., 2, ., 3	0.5865	0.9768	0.9825	yes	no
B2UFJ8	PYRC_RALPJ	3, ., 5, ., 2, ., 3	0.6176	0.9768	0.9825	yes	no
A9BSM4	PYRC_DELAS	3, ., 5, ., 2, ., 3	0.5764	0.9739	0.9739	yes	no
Q7MFB3	PYRC_VIBVY	3, ., 5, ., 2, ., 3	0.5676	0.9739	0.9853	yes	no
Q0HLX7	PYRC_SHESM	3, ., 5, ., 2, ., 3	0.5689	0.9739	0.9825	yes	no
B2VDJ8	PYRC_ERWT9	3, ., 5, ., 2, ., 3	0.5860	0.9797	0.9685	yes	no
Q9KL24	PYRC_VIBCH	3, ., 5, ., 2, ., 3	0.5911	0.9682	0.9795	yes	no
Q87J46	PYRC_VIBPA	3, ., 5, ., 2, ., 3	0.5676	0.9739	0.9853	yes	no
Q475T7	PYRC_CUPPJ	3, ., 5, ., 2, ., 3	0.6011	0.9797	0.9854	yes	no
Q6LPI7	PYRC_PHOPR	3, ., 5, ., 2, ., 3	0.5647	0.9739	0.9853	yes	no
A1KSU5	PYRC_NEIMF	3, ., 5, ., 2, ., 3	0.5823	0.9710	0.9767	yes	no
A1S9L6	PYRC_SHEAM	3, ., 5, ., 2, ., 3	0.5970	0.9710	0.9824	yes	no
Q3J872	PYRC_NITOC	3, ., 5, ., 2, ., 3	0.6088	0.9768	0.9797	yes	no
B7M937	PYRC_ECO8A	3, ., 5, ., 2, ., 3	0.5781	0.9739	0.9683	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.5.2	0.983
3rd Layer	3.5.2.3	0.979

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	fgenesh4_pg.C_LG_VII000071	dihydroorotase (EC-3.5.2.3) (346 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	eugene3.00012554	aspartate carbamoyltransferase (EC-2.1.3.2) (332 aa)				•		•	•		0.989
	estExt_fgenesh4_pg.C_LG_V0296	dihydroorotate dehydrogenase (EC-1.3.5.2) (457 aa)				•		•	•		0.982
	gw1.VII.2403.1	dihydroorotate dehydrogenase (EC-1.3.5.2) (448 aa)				•		•	•		0.981
	fgenesh4_pg.C_scaffold_13902000001	Predicted protein (319 aa)				•		•	•		0.873
	gw1.III.614.1	GMP synthetase (EC-6.3.5.2) (434 aa)				•			•		0.746
	gw1.VI.1832.1	annotation not avaliable (210 aa)				•			•		0.709
	estExt_fgenesh4_pm.C_LG_X0439	aminoimidazolecarboximide ribonucleotide transformylase/inosine monophosphate cyclohydrolase (E [...] (545 aa)				•			•		0.646
	gw1.V.1402.1	SubName- Full=Putative uncharacterized protein; (326 aa)	•						•		0.577
	gw1.X.4384.1	carbamoyl-phosphate synthase (EC-6.3.4.16) (1081 aa)				•			•		0.571
	EPSPS	3-phosphoshikimate 1-carboxyvinyltransferase (EC-2.5.1.19) (519 aa)				•			•		0.565

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	346
PLN02599	364	PLN02599, PLN02599, dihydroorotase	0.0
PRK05451	345	PRK05451, PRK05451, dihydroorotase; Provisional	0.0
COG0418	344	COG0418, PyrC, Dihydroorotase [Nucleotide transpor	0.0
cd01294	335	cd01294, DHOase, Dihydroorotase (DHOase) catalyzes	0.0
TIGR00856	341	TIGR00856, pyrC_dimer, dihydroorotase, homodimeric	1e-167
pfam01979	307	pfam01979, Amidohydro_1, Amidohydrolase family	2e-13
cd01318	361	cd01318, DHOase_IIb, Dihydroorotase (DHOase), subg	3e-13
COG0044	430	COG0044, PyrC, Dihydroorotase and related cyclic a	1e-12
TIGR00857	411	TIGR00857, pyrC_multi, dihydroorotase, multifuncti	3e-07
cd01317	374	cd01317, DHOase_IIa, Dihydroorotase (DHOase), subg	8e-07
PRK02382	443	PRK02382, PRK02382, dihydroorotase; Provisional	5e-06
cd01302	337	cd01302, Cyclic_amidohydrolases, Cyclic amidohydro	7e-06
PRK09357	423	PRK09357, pyrC, dihydroorotase; Validated	3e-05
PRK07575	438	PRK07575, PRK07575, dihydroorotase; Provisional	2e-04
PRK04250	398	PRK04250, PRK04250, dihydroorotase; Provisional	8e-04

>gnl|CDD|178209 PLN02599, PLN02599, dihydroorotase

 Score =  684 bits (1767), Expect = 0.0
 Identities = 271/344 (78%), Positives = 300/344 (87%), Gaps = 1/344 (0%)

Query: 1   MELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILK 60
            ELT+T+PDDWHLHLRDG  L AVVPHS  H+GRAIVMPNLKPP+TTTA A+AYRE I+K
Sbjct: 21  TELTITRPDDWHLHLRDGAKLAAVVPHSARHFGRAIVMPNLKPPVTTTARALAYRERIMK 80

Query: 61  ALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCV 120
           ALP  S+F PLMTLYLTD T+P+EIK A+ +GVVFAVKLYPAGATTNSQ GVTDL GKC+
Sbjct: 81  ALPPGSSFEPLMTLYLTDNTTPEEIKAAKASGVVFAVKLYPAGATTNSQAGVTDL-GKCL 139

Query: 121 HVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDA 180
            VLEEM EQ MPLLVHGEVTDP VDIFDREKVFIDTIL PL+Q+LPQLK+VMEHITTMDA
Sbjct: 140 PVLEEMAEQGMPLLVHGEVTDPSVDIFDREKVFIDTILAPLVQKLPQLKIVMEHITTMDA 199

Query: 181 VKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGS 240
           V+FVESC +G VAATVTPQHL+LNRNALFQGGL+PHNYCLPVLKREIHR+A+V A TSGS
Sbjct: 200 VEFVESCGDGNVAATVTPQHLLLNRNALFQGGLQPHNYCLPVLKREIHREALVKAATSGS 259

Query: 241 RKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDF 300
           +KFFLGTDSAPH +  KE +CGCAGIY+APVALSLYAK FEE GALDKLEAFTSFNGPDF
Sbjct: 260 KKFFLGTDSAPHPKRAKEASCGCAGIYSAPVALSLYAKAFEEAGALDKLEAFTSFNGPDF 319

Query: 301 YGLPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQPS 344
           YGLPRNTS I L K  WKVPEA+SF  G ++PMFAG T+ W   
Sbjct: 320 YGLPRNTSTITLVKSAWKVPEAYSFGGGTVVPMFAGETIPWSVV 363

Length = 364

>gnl|CDD|235474 PRK05451, PRK05451, dihydroorotase; Provisional

 Score =  651 bits (1682), Expect = 0.0
 Identities = 223/342 (65%), Positives = 261/342 (76%), Gaps = 2/342 (0%)

Query: 1   MELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILK 60
             LT+ +PDDWHLHLRDG +LKAVVP++   +GRAIVMPNL PP+TT A A+AYRE IL 
Sbjct: 3   QTLTIRRPDDWHLHLRDGAMLKAVVPYTARQFGRAIVMPNLVPPVTTVAQALAYRERILA 62

Query: 61  ALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCV 120
           ALPA SNF PLMTLYLTD T PDE++ A+ +GVV A KLYPAGATTNS  GVTD+  K  
Sbjct: 63  ALPAGSNFEPLMTLYLTDNTDPDELERAKASGVVTAAKLYPAGATTNSDAGVTDI-EKIY 121

Query: 121 HVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDA 180
            VLE M +  MPLLVHGEVTDP +DIFDRE VFID +L+PL +R P+LK+V EHITT DA
Sbjct: 122 PVLEAMQKLGMPLLVHGEVTDPDIDIFDREAVFIDRVLEPLRRRFPKLKIVFEHITTKDA 181

Query: 181 VKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGS 240
           V +V    +  +AAT+TP HL++NRN +  GG+RPH YCLP+LKRE HRQA+  A TSG+
Sbjct: 182 VDYVREAND-NLAATITPHHLLINRNDMLVGGIRPHLYCLPILKRETHRQALREAATSGN 240

Query: 241 RKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDF 300
            KFFLGTDSAPH R  KE ACGCAGI++AP AL LYA+VFEE GALDKLEAF S NGPDF
Sbjct: 241 PKFFLGTDSAPHARHAKESACGCAGIFSAPAALELYAEVFEEAGALDKLEAFASLNGPDF 300

Query: 301 YGLPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQ 342
           YGLPRNT  I L + PW VPE+  F    ++P  AG TL W 
Sbjct: 301 YGLPRNTDTITLVREPWTVPESIPFGDETVVPFRAGETLRWS 342

Length = 345

>gnl|CDD|223495 COG0418, PyrC, Dihydroorotase [Nucleotide transport and metabolism]

 Score =  558 bits (1439), Expect = 0.0
 Identities = 216/342 (63%), Positives = 261/342 (76%), Gaps = 2/342 (0%)

Query: 1   MELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILK 60
            ELT+ +PDDWHLHLRDG +LKAVVP++   +GRAI+MPNL PP+TT A A+AYRE ILK
Sbjct: 3   QELTIRRPDDWHLHLRDGAMLKAVVPYTSRGFGRAIIMPNLVPPVTTVADALAYRERILK 62

Query: 61  ALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCV 120
           A+PA   FTPLMTLYLTD+T+P+E++ A+  GV+ AVKLYPAGATTNS  GVTD+  K  
Sbjct: 63  AVPAGHRFTPLMTLYLTDSTTPEELEEAKAKGVIRAVKLYPAGATTNSDSGVTDIE-KIY 121

Query: 121 HVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDA 180
            VLE M +  MPLLVHGEVTD  VDIFDRE  FI+++L+PL QR P+LK+V+EHITT DA
Sbjct: 122 PVLEAMQKIGMPLLVHGEVTDAEVDIFDREAAFIESVLEPLRQRFPKLKIVLEHITTKDA 181

Query: 181 VKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGS 240
           V++V+      +AAT+TP HL+LNRN +  GG+RPH +CLP+LKRE HR+A+  A TSG 
Sbjct: 182 VEYVKDA-NNNLAATITPHHLLLNRNDMLVGGIRPHLFCLPILKRETHREALREAATSGH 240

Query: 241 RKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDF 300
            KFFLGTDSAPH R RKE ACGCAGI++AP AL LYA+VFEE  ALD LEAF S NGP F
Sbjct: 241 PKFFLGTDSAPHARSRKESACGCAGIFSAPFALPLYAEVFEEENALDNLEAFASDNGPKF 300

Query: 301 YGLPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQ 342
           YGLPRN   I L K  W+VPE+  F    ++P  AG TL W 
Sbjct: 301 YGLPRNDKTITLVKEEWQVPESIPFGDDIVVPFRAGETLSWS 342

Length = 344

>gnl|CDD|238619 cd01294, DHOase, Dihydroorotase (DHOase) catalyzes the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in the pyrimidine biosynthesis

 Score =  554 bits (1429), Expect = 0.0
 Identities = 205/339 (60%), Positives = 247/339 (72%), Gaps = 4/339 (1%)

Query: 3   LTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKAL 62
           LT+ +PDD HLHLRDG +LK V+P++   + RAIVMPNLKPP+TTTA A+AYRE IL A 
Sbjct: 1   LTIPRPDDMHLHLRDGAMLKLVLPYTARGFSRAIVMPNLKPPVTTTADALAYRERILAAD 60

Query: 63  PASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHV 122
           P   NFTPLMTLYLT+ T+P+E++ A+K G +  VKLYPAGATTNSQ GVTD   K   V
Sbjct: 61  P-GPNFTPLMTLYLTENTTPEELREAKKKGGIRGVKLYPAGATTNSQGGVTD-LEKIYPV 118

Query: 123 LEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVK 182
           LE M +  MPLLVHGEV D  +D+ DRE  FI  +L+PL QR P+LK+V+EHITT DAV+
Sbjct: 119 LEAMQKLGMPLLVHGEVPDFKIDVLDREAKFI-PVLEPLAQRFPKLKIVLEHITTADAVE 177

Query: 183 FVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRK 242
           +V+SC E  VAAT+TP HL+L R+ L  GGL PH YC PV KR   R+A+  A TSG  K
Sbjct: 178 YVKSCNEN-VAATITPHHLLLTRDDLLGGGLNPHLYCKPVAKRPEDREALRKAATSGHPK 236

Query: 243 FFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYG 302
           FFLG+DSAPH +  KE +CGCAGI++AP+AL   A+VFEE  ALDKLEAF S NGP+FYG
Sbjct: 237 FFLGSDSAPHPKSNKESSCGCAGIFSAPIALPYLAEVFEEHNALDKLEAFASDNGPNFYG 296

Query: 303 LPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEW 341
           LP N   I L K PWKVPE   F    ++P  AG TL W
Sbjct: 297 LPPNKKTITLVKEPWKVPEKIPFGNNGVVPFRAGETLRW 335

In contrast to the large polyfunctional CAD proteins of higher organisms, this group of DHOases is monofunctional and mainly dimeric. Length = 335

>gnl|CDD|129935 TIGR00856, pyrC_dimer, dihydroorotase, homodimeric type

 Score =  470 bits (1210), Expect = e-167
 Identities = 203/341 (59%), Positives = 254/341 (74%), Gaps = 2/341 (0%)

Query: 2   ELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKA 61
           ELT+ +PDDWHLHLRDG +LKAV+P++   + RAIVMPNL PP+TT  AAVAYRE IL A
Sbjct: 1   ELTIRRPDDWHLHLRDGAMLKAVLPYTSEIFSRAIVMPNLAPPVTTVEAAVAYRERILDA 60

Query: 62  LPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVH 121
           +PA  +FTPLMTLYLTD+ +P+E++ A+  GVV AVKLYPAGATTNS  GVTD     + 
Sbjct: 61  VPAGHDFTPLMTLYLTDSLTPEELERAKNEGVVRAVKLYPAGATTNSSHGVTD-IDAIMP 119

Query: 122 VLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAV 181
           VLE M +  +PLL+HGEVT   +DIFDRE  FI+++L+PL QR P LKVV+EHITT DA+
Sbjct: 120 VLEAMEKIGLPLLLHGEVTHGDIDIFDREARFIESVLEPLRQRFPALKVVLEHITTKDAI 179

Query: 182 KFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSR 241
            +VE      +AAT+TPQHL+  RN L  GG+ PH YCLP+LKR IH+QA++    SG  
Sbjct: 180 DYVEDGNNR-LAATITPQHLMFTRNDLLGGGVNPHLYCLPILKRNIHQQALLELAASGFP 238

Query: 242 KFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFY 301
           KFFLGTDSAPH R RKE +CGCAG ++AP AL  YA+VFEEM AL+ LEAF S NGP FY
Sbjct: 239 KFFLGTDSAPHARHRKESSCGCAGCFSAPTALPSYAEVFEEMNALENLEAFCSDNGPQFY 298

Query: 302 GLPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQ 342
           GLP N++KI+L K   ++PE+ + +   ++P  AG TL W 
Sbjct: 299 GLPVNSTKIELVKKEQQIPESIALTDDTLVPFRAGETLSWS 339

This homodimeric form of dihydroorotase is less common in microbial genomes than a related dihydroorotase that appears in a complex with aspartyltranscarbamoylase or as a homologous domain in multifunctional proteins of pyrimidine biosynthesis in higher eukaryotes [Purines, pyrimidines, nucleosides, and nucleotides, Pyrimidine ribonucleotide biosynthesis]. Length = 341

>gnl|CDD|216825 pfam01979, Amidohydro_1, Amidohydrolase family

 Score = 69.2 bits (169), Expect = 2e-13
 Identities = 56/347 (16%), Positives = 95/347 (27%), Gaps = 76/347 (21%)

Query: 10  DWHLHLRD----GDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPAS 65
           D H+HL      G+     +        R+     L  P T+   ++  R+ I++ L A+
Sbjct: 8   DAHVHLESPLLRGEDSYEAILTGAKAMLRSGTTTVLDTP-TSANTSIPLRKEIMEGLAAA 66

Query: 66  SNFTPLMTLYLTDTTS---------PDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLF 116
               P + L L  +            D      K G      +   G T  + DGV    
Sbjct: 67  PKLEPNVELLLKGSVGGRAELGEVVIDGAGEEAKAGADLIKVIEDGGKTAKAIDGVLPAL 126

Query: 117 G-----KCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVV 171
                    H  E +              +                             +
Sbjct: 127 APHDPPTVSH--EGLKN------EVELAEETEEAEKLG---------------------L 157

Query: 172 MEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQA 231
           + HI   +A                              GG+    +CL +    I    
Sbjct: 158 LVHIHAAEA----------------------SGEVNAILGGVDLLAHCLHLDDEAI---E 192

Query: 232 VVSAVTSGSRKFFLGTDSAPHERGRKE-CACGCAGIYNAPVALSLYAKVFEEMGALDKLE 290
           ++    SG     L  +S  H  GR    +    GI       +  A++ ++ G +    
Sbjct: 193 LLKEAGSGIAHCPLSNESILHRGGRFSLMSGDAQGIGELGSGGARLARLADKGGVVGLGT 252

Query: 291 AFTSFNGPDFYGLPRNTSKIKLTKIPWKVP-EAFSFSFGDIIPMFAG 336
                NG DFY  P   S I+  ++    P +A       +  +  G
Sbjct: 253 DGAGLNGKDFYLDPDGLSPIEALRMATINPAKALGLD-DRVGSIEVG 298

This family of enzymes are a a large metal dependent hydrolase superfamily. The family includes Adenine deaminase EC:3.5.4.2 that hydrolyses adenine to form hypoxanthine and ammonia. Adenine deaminases reaction is important for adenine utilisation as a purine and also as a nitrogen source. This family also includes dihydroorotase and N-acetylglucosamine-6-phosphate deacetylases, EC:3.5.1.25 These enzymes catalyze the reaction N-acetyl-D-glucosamine 6-phosphate + H2O <=> D-glucosamine 6-phosphate + acetate. This family includes the catalytic domain of urease alpha subunit. Dihydroorotases (EC:3.5.2.3) are also included. Length = 307

>gnl|CDD|238643 cd01318, DHOase_IIb, Dihydroorotase (DHOase), subgroup IIb; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis

 Score = 69.7 bits (171), Expect = 3e-13
 Identities = 74/319 (23%), Positives = 124/319 (38%), Gaps = 43/319 (13%)

Query: 10  DWHLHLRD------GDLLKAVVPHSVSHYGRAIV--MPNLKPPITTTAAAVAYRESILKA 61
           D H+H R+       D +      + +  G   V  MPN KPP TTTA A+  +  +  A
Sbjct: 10  DIHVHFREPGLTYKEDFVSGS--RAAAAGGVTTVMDMPNTKPP-TTTAEALYEKLRLAAA 66

Query: 62  LPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFG---- 117
             +  ++     LY   T S D ++   K       K++   +T +  D    L      
Sbjct: 67  K-SVVDY----GLYFGVTGSED-LEELDKAPPAG-YKIFMGDSTGDLLDDEETLERIFAE 119

Query: 118 ----KCVHV-LEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVM 172
                  H   E+ + +N   L           I D E   + T     + R    ++ +
Sbjct: 120 GSVLVTFHAEDEDRLRENRKELKG---ESAHPRIRDAEAAAVATARALKLARRHGARLHI 176

Query: 173 EHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAV 232
            H++T + +K ++  K G     VTP HL L+        L       P L+    R+A+
Sbjct: 177 CHVSTPEELKLIKKAKPGV-TVEVTPHHLFLDVEDY--DRLGTLGKVNPPLRSREDRKAL 233

Query: 233 VSAVTSGSRKFFLGTDSAPH-----ERGRKECACGCAGIYNA-PVALSLYAKVFEEMGAL 286
           + A+  G R   + +D APH      +G      G  G+  A P+ L+L   V + + +L
Sbjct: 234 LQALADG-RIDVIASDHAPHTLEEKRKGYPAAPSGIPGVETALPLMLTL---VNKGILSL 289

Query: 287 DKLEAFTSFNGPDFYGLPR 305
            ++   TS N    +G+  
Sbjct: 290 SRVVRLTSHNPARIFGIKN 308

This group contains the archeal members of the DHOase family. Length = 361

>gnl|CDD|223122 COG0044, PyrC, Dihydroorotase and related cyclic amidohydrolases [Nucleotide transport and metabolism]

 Score = 68.1 bits (167), Expect = 1e-12
 Identities = 74/300 (24%), Positives = 111/300 (37%), Gaps = 51/300 (17%)

Query: 36  IVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVF 95
           + MPN KPPI T  A     E          ++     L    T          + GV  
Sbjct: 89  VDMPNTKPPIDTAEALEDKLERAKGKSVV--DYAFYGGL----TKGNLGKLELTERGVEA 142

Query: 96  AVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFID 155
             K +   +T    D V +        LE   E    +LVH E  D I      E V  +
Sbjct: 143 GFKGFMDDSTGALDDDVLEE------ALEYAAELGALILVHAEDDDLI-----AEGVMNE 191

Query: 156 TILQP--------------LIQRLPQL------KVVMEHITTMDAVKFVESCKEGFVAAT 195
            +  P               I R  +L      +V + HI+T ++V+ + + K   +  T
Sbjct: 192 GLRAPELGLAGRPPIAEASAIARDLELARATGARVHICHISTKESVELIRAAKAEGIRVT 251

Query: 196 --VTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPH- 252
             VTP HL+L+   +    L       P L+ E  R+A+  A+  G     + +D APH 
Sbjct: 252 AEVTPHHLLLDEEDIE--DLGTLAKVNPPLRDEEDREALWEALKDGV-IDVIASDHAPHT 308

Query: 253 --ERGRK--ECACGCAGIYNA-PVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLPRNT 307
             E+     E   G  G+  A P+ L+L  K      +L++L    S N    +GLP   
Sbjct: 309 LEEKRLPFEEAPSGIPGLETALPLLLTLVKK---GRLSLERLVELLSTNPARIFGLPPKG 365

Length = 430

>gnl|CDD|233153 TIGR00857, pyrC_multi, dihydroorotase, multifunctional complex type

 Score = 51.7 bits (124), Expect = 3e-07
 Identities = 71/298 (23%), Positives = 108/298 (36%), Gaps = 51/298 (17%)

Query: 10  DWHLHLRD------GDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALP 63
           D H+HLRD       D+       +   +     MPN KPPI  T   + ++   LK + 
Sbjct: 43  DLHVHLRDPGEEYKEDIESGSKAAAHGGFTTVADMPNTKPPI-DTPETLEWKLQRLKKV- 100

Query: 64  ASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTN--SQDGVTDL-FGKCV 120
           +  +       Y   T      +L        A +L  AGA     + DG          
Sbjct: 101 SLVDVHL----YGGVTQGNQGKELTE------AYELKEAGAVGRMFTDDGSEVQDILSMR 150

Query: 121 HVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPL-------------IQRLPQ 167
             LE      +P+ +H E  DP  D+     +        L             + RL +
Sbjct: 151 RALEYAAIAGVPIALHAE--DP--DLIYGGVMHEGPSAAQLGLPARPPEAEEVAVARLLE 206

Query: 168 L------KVVMEHITTMDAVKFVESCKEGFVAAT--VTPQHLVLNRNALFQGGLRPHNYC 219
           L       V + HI+T ++++ +   K   +  T  VTP HL+L+   +    L  +   
Sbjct: 207 LAKHAGCPVHICHISTKESLELIVKAKSQGIKITAEVTPHHLLLSEEDV--ARLDGNGKV 264

Query: 220 LPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPH--ERGRKECACGCAGIYNAPVALSL 275
            P L+ +  R A++  +  G       TD APH  E   KE A    GI     AL L
Sbjct: 265 NPPLREKEDRLALIEGLKDGIIDII-ATDHAPHTLEEKTKEFAAAPPGIPGLETALPL 321

In contrast to the homodimeric type of dihydroorotase found in E. coli, this class tends to appear in a large, multifunctional complex with aspartate transcarbamoylase. Homologous domains appear in multifunctional proteins of higher eukaryotes. In some species, including Pseudomonas putida and P. aeruginosa, this protein is inactive but is required as a non-catalytic subunit of aspartate transcarbamoylase (ATCase). In these species, a second, active dihydroorotase is also present. The seed for this model does not include any example of the dihydroorotase domain of eukaryotic multidomain pyrimidine synthesis proteins. All proteins described by This model should represent active and inactive dihydroorotase per se and functionally equivalent domains of multifunctional proteins from higher eukaryotes, but exclude related proteins such as allantoinase [Purines, pyrimidines, nucleosides, and nucleotides, Pyrimidine ribonucleotide biosynthesis]. Length = 411

>gnl|CDD|238642 cd01317, DHOase_IIa, Dihydroorotase (DHOase), subgroup IIa; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis

 Score = 49.9 bits (120), Expect = 8e-07
 Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 9/145 (6%)

Query: 169 KVVMEHITTMDAVKFVESCKEGF--VAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKRE 226
           +V  +H++T  +++ +   K     V A VTP HL+L+  AL       +    P L+ E
Sbjct: 187 RVHFQHLSTARSLELIRKAKAKGLPVTAEVTPHHLLLDDEALE--SYDTNAKVNPPLRSE 244

Query: 227 IHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCA--GIYNAPVALSLYAKVF--EE 282
             R+A++ A+  G+    + +D APH    K+     A  GI     AL L   +     
Sbjct: 245 EDREALIEALKDGTID-AIASDHAPHTDEEKDLPFAEAPPGIIGLETALPLLWTLLVKGG 303

Query: 283 MGALDKLEAFTSFNGPDFYGLPRNT 307
           +  L  L    S N     GLP   
Sbjct: 304 LLTLPDLIRALSTNPAKILGLPPGR 328

This subgroup also contains proteins that lack the active site, like unc-33, a C.elegans protein involved in axon growth. Length = 374

>gnl|CDD|179417 PRK02382, PRK02382, dihydroorotase; Provisional

 Score = 47.7 bits (114), Expect = 5e-06
 Identities = 37/141 (26%), Positives = 61/141 (43%), Gaps = 21/141 (14%)

Query: 174 HITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVV 233
           HI+T + V   ++ +   +   VTP HL L+R       L       P L+ E  R+A+ 
Sbjct: 234 HISTPEGV---DAARREGITCEVTPHHLFLSRRDW--ERLGTFGKMNPPLRSEKRREALW 288

Query: 234 SAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAP---------VALSLYAKVFEEMG 284
             +  G+    + +D APH R  K+     A I++AP         + L L A V +   
Sbjct: 289 ERLNDGTID-VVASDHAPHTREEKD-----ADIWDAPSGVPGVETMLPLLLAA-VRKNRL 341

Query: 285 ALDKLEAFTSFNGPDFYGLPR 305
            L+++   T+ N    +GL  
Sbjct: 342 PLERVRDVTAANPARIFGLDG 362

Length = 443

>gnl|CDD|238627 cd01302, Cyclic_amidohydrolases, Cyclic amidohydrolases, including hydantoinase, dihydropyrimidinase, allantoinase, and dihydroorotase, are involved in the metabolism of pyrimidines and purines, sharing the property of hydrolyzing the cyclic amide bond of each substrate to the corresponding N-carbamyl amino acids

 Score = 47.0 bits (112), Expect = 7e-06
 Identities = 57/267 (21%), Positives = 94/267 (35%), Gaps = 57/267 (21%)

Query: 10  DWHLHLRDGDLL----------KAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESIL 59
           D H+HLRD              +A     V+     I MPN  PP        A    I 
Sbjct: 9   DIHVHLRDPGGTTYKEDFESGSRAAAAGGVTT---VIDMPNTGPPPIDL---PAIELKIK 62

Query: 60  KALPAS-SNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLY-PAGATTNSQDGVTDLFG 117
            A  +S  +F+      +      DE+K     G+  ++K++               L  
Sbjct: 63  LAEESSYVDFS--FHAGIGPGDVTDELKKLFDAGIN-SLKVFMNYYFGELFDVDDGTLMR 119

Query: 118 KCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITT 177
                  E+  +  P++VH E                      L +      V + H+++
Sbjct: 120 T----FLEIASRGGPVMVHAE------------------RAAQLAE-EAGANVHIAHVSS 156

Query: 178 MDAVKFVESCKEGFVAAT--VTPQHLVLNRNALFQGG----LRPHNYCLPVLKREIHRQA 231
            +A++ ++  K   V  T  V P HL L+ + L   G    + P     P+  +E  R+A
Sbjct: 157 GEALELIKFAKNKGVKVTCEVCPHHLFLDESMLRLNGAWGKVNP-----PLRSKE-DREA 210

Query: 232 VVSAVTSGSRKFFLGTDSAPHERGRKE 258
           +   V +G       +D APH +  KE
Sbjct: 211 LWEGVKNGKIDTI-ASDHAPHSKEEKE 236

Allantoinases catalyze the degradation of purines, while dihydropyrimidinases and hydantoinases, a microbial counterpart of dihydropyrimidinase, are involved in pyrimidine degradation. Dihydroorotase participates in the de novo synthesis of pyrimidines. Length = 337

>gnl|CDD|236479 PRK09357, pyrC, dihydroorotase; Validated

 Score = 45.2 bits (108), Expect = 3e-05
 Identities = 75/331 (22%), Positives = 113/331 (34%), Gaps = 95/331 (28%)

Query: 10  DWHLHLRD------GDLLKAVVPHSVSH------YGRAIVMPNLKPPITTTAAAVAYRES 57
           D H+HLR+        +       + S       +   + MPN KP I T    V   E 
Sbjct: 57  DLHVHLREPGQEDKETI------ETGSRAAAAGGFTTVVAMPNTKPVIDT--PEVV--EY 106

Query: 58  ILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDG--VTDL 115
           +L                            A++ G+V    + P GA T    G  +T+ 
Sbjct: 107 VLD--------------------------RAKEAGLV---DVLPVGAITKGLAGEELTEF 137

Query: 116 ----------F---GKCVH---VLEEMVEQ----NMPLLVHGEVTDPIVDIFDREKVFID 155
                     F   G  V    ++   +E     ++ +  H E           E     
Sbjct: 138 GALKEAGVVAFSDDGIPVQDARLMRRALEYAKALDLLIAQHCEDPSLTEGGVMNEGEVSA 197

Query: 156 TI-LQP--------------LIQRLPQLKVVMEHITTMDAVKFVESCKE-GF-VAATVTP 198
            + L                L+      +V + H++T  +V+ +   K  G  V A VTP
Sbjct: 198 RLGLPGIPAVAEEVMIARDVLLAEATGARVHICHVSTAGSVELIRWAKALGIKVTAEVTP 257

Query: 199 QHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKE 258
            HL+L    L      P+    P L+ E  R+A++  +  G+    + TD APH R  KE
Sbjct: 258 HHLLLTDEDLL--TYDPNYKVNPPLRTEEDREALIEGLKDGTIDA-IATDHAPHAREEKE 314

Query: 259 CACGCA--GIYNAPVALSLYAKVFEEMGALD 287
           C    A  GI     ALSL      + G LD
Sbjct: 315 CEFEAAPFGITGLETALSLLYTTLVKTGLLD 345

Length = 423

>gnl|CDD|236055 PRK07575, PRK07575, dihydroorotase; Provisional

 Score = 42.7 bits (101), Expect = 2e-04
 Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 5/80 (6%)

Query: 174 HITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQ-GGLRPHNYCLPVLKREIHRQAV 232
           H++T    + +   K  +V A VTPQHL+LN +A  + G L   N   P L+     +A+
Sbjct: 232 HLSTAIEAELLRQDKPSWVTAEVTPQHLLLNTDAYERIGTLAQMN---PPLRSPEDNEAL 288

Query: 233 VSAVTSGSRKFFLGTDSAPH 252
             A+  G    F+ TD APH
Sbjct: 289 WQALRDGVID-FIATDHAPH 307

Length = 438

>gnl|CDD|235265 PRK04250, PRK04250, dihydroorotase; Provisional

 Score = 40.5 bits (95), Expect = 8e-04
 Identities = 34/106 (32%), Positives = 46/106 (43%), Gaps = 10/106 (9%)

Query: 174 HITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVV 233
           HI+T D +K +      +V+  VTP HL L R    +  L       P L+ E  R+A+ 
Sbjct: 204 HISTKDGLKLILKSNLPWVSFEVTPHHLFLTRKDYERNPLLKVY---PPLRSEEDRKALW 260

Query: 234 SAVTSGSRKFFLGTDSAPHERGRKECACGCAGI--YNAPVALSLYA 277
                 S+   + +D APH    KE   G AGI      V L L A
Sbjct: 261 ENF---SKIPIIASDHAPHTLEDKE--AGAAGIPGLETEVPLLLDA 301

Length = 398

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	346
COG0044	430	PyrC Dihydroorotase and related cyclic amidohydrol	100.0
PRK07369	418	dihydroorotase; Provisional	100.0
cd01302	337	Cyclic_amidohydrolases Cyclic amidohydrolases, inc	100.0
cd01316	344	CAD_DHOase The eukaryotic CAD protein is a trifunc	100.0
PRK09059	429	dihydroorotase; Validated	100.0
cd01294	335	DHOase Dihydroorotase (DHOase) catalyzes the rever	100.0
cd01318	361	DHOase_IIb Dihydroorotase (DHOase), subgroup IIb;	100.0
TIGR00856	341	pyrC_dimer dihydroorotase, homodimeric type. This	100.0
PRK01211	409	dihydroorotase; Provisional	100.0
PRK07627	425	dihydroorotase; Provisional	100.0
PRK05451	345	dihydroorotase; Provisional	100.0
PLN02599	364	dihydroorotase	100.0
PRK08417	386	dihydroorotase; Provisional	100.0
PLN02795	505	allantoinase	100.0
PRK08044	449	allantoinase; Provisional	100.0
PRK00369	392	pyrC dihydroorotase; Provisional	100.0
PRK04250	398	dihydroorotase; Provisional	100.0
PRK06189	451	allantoinase; Provisional	100.0
cd01317	374	DHOase_IIa Dihydroorotase (DHOase), subgroup IIa;	100.0
PRK13404	477	dihydropyrimidinase; Provisional	100.0
PRK07575	438	dihydroorotase; Provisional	100.0
PRK09060	444	dihydroorotase; Validated	100.0
TIGR00857	411	pyrC_multi dihydroorotase, multifunctional complex	100.0
PRK02382	443	dihydroorotase; Provisional	100.0
TIGR03178	443	allantoinase allantoinase. This enzyme carries out	100.0
PRK09236	444	dihydroorotase; Reviewed	100.0
PLN02942	486	dihydropyrimidinase	100.0
cd01315	447	L-HYD_ALN L-Hydantoinases (L-HYDs) and Allantoinas	100.0
KOG2584	522	consensus Dihydroorotase and related enzymes [Nucl	100.0
PRK09357	423	pyrC dihydroorotase; Validated	100.0
cd01314	447	D-HYD D-hydantoinases (D-HYD) also called dihydrop	100.0
PRK08323	459	phenylhydantoinase; Validated	100.0
TIGR02033	454	D-hydantoinase D-hydantoinase. This model represen	100.0
COG0418	344	PyrC Dihydroorotase [Nucleotide transport and meta	100.0
KOG2902	344	consensus Dihydroorotase [Nucleotide transport and	100.0
PRK09061	509	D-glutamate deacylase; Validated	100.0
cd01297	415	D-aminoacylase D-aminoacylases (N-acyl-D-Amino aci	100.0
TIGR02318	376	phosphono_phnM phosphonate metabolism protein PhnM	99.97
PRK15446	383	phosphonate metabolism protein PhnM; Provisional	99.96
cd01308	387	Isoaspartyl-dipeptidase Isoaspartyl dipeptidase hy	99.88
PRK10657	388	isoaspartyl dipeptidase; Provisional	99.87
PRK12394	379	putative metallo-dependent hydrolase; Provisional	99.84
cd01307	338	Met_dep_hydrolase_B Metallo-dependent hydrolases,	99.8
PRK13985	568	ureB urease subunit beta; Provisional	99.8
PRK13206	573	ureC urease subunit alpha; Reviewed	99.8
PRK13308	569	ureC urease subunit alpha; Reviewed	99.79
TIGR01178	552	ade adenine deaminase. The family described by thi	99.78
cd00375	567	Urease_alpha Urease alpha-subunit; Urease is a nic	99.78
PRK13207	568	ureC urease subunit alpha; Reviewed	99.77
PRK13309	572	ureC urease subunit alpha; Reviewed	99.77
PF12890	142	DHOase: Dihydro-orotase-like; InterPro: IPR024403	99.73
cd01298	411	ATZ_TRZ_like TRZ/ATZ family contains enzymes from	99.69
cd01295	422	AdeC Adenine deaminase (AdeC) directly deaminates	99.69
PRK09237	380	dihydroorotase; Provisional	99.68
PRK07583	438	cytosine deaminase-like protein; Validated	99.64
TIGR01792	567	urease_alph urease, alpha subunit. This model desc	99.63
PF13147	304	Amidohydro_4: Amidohydrolase; PDB: 3SFW_B 2FTW_A 2	99.63
cd01299	342	Met_dep_hydrolase_A Metallo-dependent hydrolases,	99.62
cd01292	275	metallo-dependent_hydrolases Superfamily of metall	99.62
PLN02303	837	urease	99.59
TIGR01975	389	isoAsp_dipep isoaspartyl dipeptidase IadA. The L-i	99.59
PRK07228	445	N-ethylammeline chlorohydrolase; Provisional	99.59
TIGR03583	365	EF_0837 probable amidohydrolase EF_0837/AHA_3915.	99.56
PF01979	333	Amidohydro_1: Amidohydrolase family; InterPro: IPR	99.4
cd00854	374	NagA N-acetylglucosamine-6-phosphate deacetylase,	99.37
cd01296	371	Imidazolone-5PH Imidazolonepropionase/imidazolone-	99.36
cd01304	541	FMDH_A Formylmethanofuran dehydrogenase (FMDH) sub	99.35
cd01306	325	PhnM PhnM is believed to be a subunit of the membr	99.31
PRK10027	588	cryptic adenine deaminase; Provisional	99.21
TIGR00221	380	nagA N-acetylglucosamine-6-phosphate deacetylase.	99.21
TIGR01224	377	hutI imidazolonepropionase. This enzyme catalyzes	99.17
PRK08203	451	hydroxydechloroatrazine ethylaminohydrolase; Revie	99.08
TIGR03121	556	one_C_dehyd_A formylmethanofuran dehydrogenase sub	99.07
PRK09356	406	imidazolonepropionase; Validated	99.07
PRK11170	382	nagA N-acetylglucosamine-6-phosphate deacetylase;	99.06
PRK14085	382	imidazolonepropionase; Provisional	99.02
COG3964	386	Predicted amidohydrolase [General function predict	99.0
PRK08393	424	N-ethylammeline chlorohydrolase; Provisional	99.0
PRK06687	419	chlorohydrolase; Validated	98.99
PRK07572	426	cytosine deaminase; Validated	98.98
PRK09045	443	N-ethylammeline chlorohydrolase; Provisional	98.98
TIGR02967	401	guan_deamin guanine deaminase. This model describe	98.97
PRK05985	391	cytosine deaminase; Provisional	98.96
PRK09230	426	cytosine deaminase; Provisional	98.96
cd01309	359	Met_dep_hydrolase_C Metallo-dependent hydrolases,	98.95
PRK06151	488	N-ethylammeline chlorohydrolase; Provisional	98.92
PRK08204	449	hypothetical protein; Provisional	98.87
PRK15493	435	5-methylthioadenosine/S-adenosylhomocysteine deami	98.86
cd01293	398	Bact_CD Bacterial cytosine deaminase and related m	98.85
COG1228	406	HutI Imidazolonepropionase and related amidohydrol	98.85
cd01310	251	TatD_DNAse TatD like proteins; E.coli TatD is a cy	98.84
cd01300	479	YtcJ_like YtcJ_like metal dependent amidohydrolase	98.78
PRK07203	442	putative chlorohydrolase/aminohydrolase; Validated	98.77
PRK07213	375	chlorohydrolase; Provisional	98.75
PRK12393	457	amidohydrolase; Provisional	98.75
PRK09228	433	guanine deaminase; Provisional	98.66
cd01313	418	Met_dep_hydrolase_E Metallo-dependent hydrolases,	98.64
PRK06846	410	putative deaminase; Validated	98.63
cd01303	429	GDEase Guanine deaminase (GDEase). Guanine deamina	98.62
TIGR03314	441	Se_ssnA putative selenium metabolism protein SsnA.	98.59
cd01312	381	Met_dep_hydrolase_D Metallo-dependent hydrolases,	98.58
PRK06380	418	metal-dependent hydrolase; Provisional	98.51
PRK09229	456	N-formimino-L-glutamate deiminase; Validated	98.44
PRK06038	430	N-ethylammeline chlorohydrolase; Provisional	98.42
PRK08418	408	chlorohydrolase; Provisional	98.4
TIGR02022	455	hutF formiminoglutamate deiminase. In some species	98.4
PF04909	273	Amidohydro_2: Amidohydrolase; InterPro: IPR006992	98.29
COG1001	584	AdeC Adenine deaminase [Nucleotide transport and m	98.26
TIGR00010	252	hydrolase, TatD family. Several genomes have multi	98.25
cd01311	263	PDC_hydrolase 2-pyrone-4,6-dicarboxylic acid (PDC)	98.25
COG2159	293	Predicted metal-dependent hydrolase of the TIM-bar	98.19
COG1574	535	Predicted metal-dependent hydrolase with the TIM-b	98.17
cd01305	263	archeal_chlorohydrolases Predicted chlorohydrolase	98.13
COG0402	421	SsnA Cytosine deaminase and related metal-dependen	98.08
COG3653	579	N-acyl-D-aspartate/D-glutamate deacylase [Secondar	98.06
COG1820	380	NagA N-acetylglucosamine-6-phosphate deacetylase [	98.04
PF07969	404	Amidohydro_3: Amidohydrolase family; InterPro: IPR	97.95
PF13594	68	Amidohydro_5: Amidohydrolase; PDB: 4F0R_A 4F0S_A 1	97.89
PRK06886	329	hypothetical protein; Validated	97.86
PRK10812	265	putative DNAse; Provisional	97.71
cd00530	293	PTE Phosphotriesterase (PTE) catalyzes the hydroly	97.32
PF01026	255	TatD_DNase: TatD related DNase The Pfam entry find	97.32
COG0084	256	TatD Mg-dependent DNase [DNA replication, recombin	97.25
PRK11449	258	putative deoxyribonuclease YjjV; Provisional	97.19
COG0804	568	UreC Urea amidohydrolase (urease) alpha subunit [A	97.17
COG3454	377	Metal-dependent hydrolase involved in phosphonate	96.85
PRK09875	292	putative hydrolase; Provisional	96.64
COG1099	254	Predicted metal-dependent hydrolases with the TIM-	96.63
PRK10425	258	DNase TatD; Provisional	96.6
KOG3968	439	consensus Atrazine chlorohydrolase/guanine deamina	96.41
cd01308	387	Isoaspartyl-dipeptidase Isoaspartyl dipeptidase hy	94.9
COG1831	285	Predicted metal-dependent hydrolase (urease superf	93.12
PF02126	308	PTE: Phosphotriesterase family; InterPro: IPR00155	92.37
smart00518	273	AP2Ec AP endonuclease family 2. These endonuclease	90.03
cd01320	325	ADA Adenosine deaminase (ADA) is a monomeric zinc	89.51
COG4464	254	CapC Capsular polysaccharide biosynthesis protein	88.58
PF07969	404	Amidohydro_3: Amidohydrolase family; InterPro: IPR	87.65
COG1735	316	Php Predicted metal-dependent hydrolase with the T	87.53
KOG4245	297	consensus Predicted metal-dependent hydrolase of t	86.0
PTZ00372	413	endonuclease 4-like protein; Provisional	84.59
COG1229	575	FwdA Formylmethanofuran dehydrogenase subunit A [E	84.53
KOG3892	407	consensus N-acetyl-glucosamine-6-phosphate deacety	84.33
cd01300	479	YtcJ_like YtcJ_like metal dependent amidohydrolase	84.22
TIGR01430	324	aden_deam adenosine deaminase. This family include	83.9
PRK01060	281	endonuclease IV; Provisional	81.42
COG1574	535	Predicted metal-dependent hydrolase with the TIM-b	80.42
PF03102	241	NeuB: NeuB family; InterPro: IPR013132 NeuB is the	80.37

>COG0044 PyrC Dihydroorotase and related cyclic amidohydrolases [Nucleotide transport and metabolism]

Probab=100.00  E-value=2e-80  Score=606.83  Aligned_cols=323  Identities=26%  Similarity=0.289  Sum_probs=284.4

Q ss_pred             EEecCccccceecCC-CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEe
Q 019093            3 LTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYL   76 (346)
Q Consensus         3 ~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~   76 (346)
                      +|+||+||+|||||+ |.++||||+|+|     ||+|||++||||.|+++++++++.+.+++++.+.  |||++|+++  
T Consensus        50 ~v~PG~ID~HVH~repg~~~ke~~~tgs~AAa~GG~Ttv~dmPnt~P~~~~~~~~~~~~~~a~~~~~--vd~~~~~~i--  125 (430)
T COG0044          50 LVLPGLVDLHVHFREPGFEHKETFETGSRAAAAGGVTTVVDMPNTKPPIDTAEALEDKLERAKGKSV--VDYAFYGGL--  125 (430)
T ss_pred             EEccCeeEEEEecCCCCcchhhhHHHHHHHHHcCCceEEEECCCCCCCCCCHHHHHHHHHHhhccce--eEEEEEEEE--
Confidence            799999999999999 999999999985     9999999999999999999999999988876555  999999998  


Q ss_pred             CCCCCH-HHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC------C----
Q 019093           77 TDTTSP-DEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV------D----  145 (346)
Q Consensus        77 ~~~~~~-~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~------~----  145 (346)
                      +.+... .++.++   +.+.++|+||.+.     .+..+. ..+++.|++++..|.++++||||++++.      +    
T Consensus       126 t~~~~~~~~~~~~---~~~~g~~~F~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~H~Ed~~~~~~~~~~~g~~~~  196 (430)
T COG0044         126 TKGNLGKLELTER---GVEAGFKGFMDDS-----TGALDD-DVLEEALEYAAELGALILVHAEDDDLIAEGVMNEGLRAP  196 (430)
T ss_pred             eccccchhhhhhh---hhccceEEEecCC-----cCcCCH-HHHHHHHHHHHhcCCeEEEecCChhHhhhHHHhcCccch
Confidence            544322 233333   2247889999642     133355 7899999999999999999999997531      1    


Q ss_pred             -------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccCCCCCc
Q 019093          146 -------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQGGLRPH  216 (346)
Q Consensus       146 -------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~~~~~~  216 (346)
                             ...+|..+++|.+  .+|+.+|+|+||+|+||++++++|+++|  |.+||||||||||+||++++..  +++.
T Consensus       197 ~~~~~~~p~~aE~~~iar~~--~la~~~g~~vhi~HiSt~~sv~li~~ak~~g~~vt~EvtphHL~l~~~~~~~--~~~~  272 (430)
T COG0044         197 ELGLAGRPPIAEASAIARDL--ELARATGARVHICHISTKESVELIRAAKAEGIRVTAEVTPHHLLLDEEDIED--LGTL  272 (430)
T ss_pred             hhccCCCChHHHHHHHHHHH--HHHHHhCCcEEEEEcCCHHHHHHHHHHhhcCCceEEeecchheEccHhHhhc--cCcc
Confidence                   1468999999999  8999999999999999999999999999  7999999999999999999875  6799


Q ss_pred             eEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCC--CCCccchhHHHHHHHHHHHhc--CCHHHHHHH
Q 019093          217 NYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACG--CAGIYNAPVALSLYAKVFEEM--GALDKLEAF  292 (346)
Q Consensus       217 ~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~--~~G~~g~e~~lp~l~~~~~~~--~~l~~lv~~  292 (346)
                      +|||||||+++||++||++|++|+||+ |+||||||+.++|..+|.  ++|++|+|+.||++|+ ++++  .+|++++++
T Consensus       273 ~k~nPPLR~~~dr~aL~~~l~~G~ID~-iasDHaPht~eeK~~~f~~ap~G~~glE~~lpl~l~-lv~~g~lsl~~~v~~  350 (430)
T COG0044         273 AKVNPPLRDEEDREALWEALKDGVIDV-IASDHAPHTLEEKRLPFEEAPSGIPGLETALPLLLT-LVKKGRLSLERLVEL  350 (430)
T ss_pred             eEECCCCCCHHHHHHHHHHHhCCCCcE-EEcCCCCCCHHHhccchhhCCCCCccHHHHHHHHHH-HHHcCCcCHHHHHHH
Confidence            999999999999999999999999999 999999999999986654  4699999999999998 4443  489999999


Q ss_pred             HchhhhhhcCCCCC-------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEE
Q 019093          293 TSFNGPDFYGLPRN-------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL  345 (346)
Q Consensus       293 ~s~nPAki~gl~~k-------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~  345 (346)
                      +|.||||+|||+.|       +|||+|||  ++|+|+++.++||++|||| +|++++|+|++
T Consensus       351 ~S~nPA~ifgl~~~g~i~~G~~ADl~lvD~~~~~~i~~~~~~sk~~~sPf-~G~~~~g~v~~  411 (430)
T COG0044         351 LSTNPARIFGLPPKGAIEEGADADLVLVDPDEEWTIRAEELYSKAKNSPF-EGFELKGRVVA  411 (430)
T ss_pred             HhhCHHHHhCCCCCCcccCCCccCEEEEcCCCCeEEchhhhccccCCCCc-CCCEEeeeEEE
Confidence            99999999999533       89999999  8999999999999999999 79999999986

>PRK07369 dihydroorotase; Provisional

Probab=100.00  E-value=3.3e-78  Score=594.14  Aligned_cols=326  Identities=19%  Similarity=0.167  Sum_probs=287.4

Q ss_pred             eEEecCccccceecCC-CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLY   75 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~   75 (346)
                      ++|+||+||+|||+|+ +..++||+.+++     ||||||++|||+.|++++.+.++.+++++++.+.  |||.+|+++.
T Consensus        53 ~~vlPG~ID~H~H~~~~~~~~~e~~~s~~~aa~~GGvTtv~~~pn~~P~~~~~~~~~~~~~~~~~~~~--vd~~~~~~~~  130 (418)
T PRK07369         53 LILGPGLVDLYSHSGEPGFEERETLASLAAAAAAGGFTRVAILPDTFPPLDNPATLARLQQQAQQIPP--VQLHFWGALT  130 (418)
T ss_pred             CEEecCEEecccccCCCCcCCCccHHHHHHHHHhCCceEEEECCCCCCCCCCHHHHHHHHHHhcccCc--eeEEEEEEEe
Confidence            4899999999999999 888999998865     9999999999999999999999998888776554  9999999874


Q ss_pred             eC-CCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC------C---
Q 019093           76 LT-DTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV------D---  145 (346)
Q Consensus        76 ~~-~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~------~---  145 (346)
                      .. .+.+.++|.+|.+.| +++||.+         .++.+. ..++++|++++++|+++++||||++++.      +   
T Consensus       131 ~~~~~~~~~ei~~l~~~G-v~~f~~~---------~~~~~~-~~l~~~~~~~~~~~~~v~~H~Ed~~l~~~~~~~~g~~~  199 (418)
T PRK07369        131 LGGQGKQLTELAELAAAG-VVGFTDG---------QPLENL-ALLRRLLEYLKPLGKPVALWPCDRSLAGNGVMREGLLA  199 (418)
T ss_pred             eCCCCccHhhHHHHHHCC-CEEEECC---------CcCCCH-HHHHHHHHHHHhcCCeEEEecCChhhhhcCcccCChhH
Confidence            21 223577899998888 7899832         233455 7899999999999999999999988731      1   


Q ss_pred             --------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccCCCCC
Q 019093          146 --------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQGGLRP  215 (346)
Q Consensus       146 --------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~~~~~  215 (346)
                              +..+|.+++.|++  .+|+.+|+|+||+|+||++++++|+++|  |.+||||||||||+||++++..  +++
T Consensus       200 ~~~~~~~~p~~aE~~av~r~~--~la~~~~~~~hi~HvSs~~~~~~i~~ak~~g~~vt~Ev~phhL~l~~~~~~~--~~~  275 (418)
T PRK07369        200 LRLGLPGDPASAETTALAALL--ELVAAIGTPVHLMRISTARSVELIAQAKARGLPITASTTWMHLLLDTEALAS--YDP  275 (418)
T ss_pred             HHhCCCCCCHHHHHHHHHHHH--HHHHHHCCcEEEEeCCCHHHHHHHHHHHHcCCCeEEEecHHHHhccHHHHhc--cCC
Confidence                    2468999999999  8999999999999999999999999988  7899999999999999999864  468


Q ss_pred             ceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCC--CCCccchhHHHHHHHHHHHhc--CCHHHHHH
Q 019093          216 HNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACG--CAGIYNAPVALSLYAKVFEEM--GALDKLEA  291 (346)
Q Consensus       216 ~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~--~~G~~g~e~~lp~l~~~~~~~--~~l~~lv~  291 (346)
                      ++|||||||+++||++||++|++|+||+ |+||||||+.++|..+|+  .+|++|+|+.||++++.++++  .+++++++
T Consensus       276 ~~kv~PPLR~~~d~~aL~~~l~~G~Id~-i~SDHaP~~~~~K~~~~~~~~~G~~G~e~~l~~~~~~~v~~~~i~l~~~v~  354 (418)
T PRK07369        276 NLRLDPPLGNPSDRQALIEGVRTGVIDA-IAIDHAPYTYEEKTVAFAEAPPGAIGLELALPLLWQNLVETGELSALQLWQ  354 (418)
T ss_pred             CcEECCCCCCHHHHHHHHHHHhcCCCCE-EEcCCCCCCHHHccCCHhHCCCCceeHHHHHHHHHHHHHHcCCCCHHHHHH
Confidence            8999999999999999999999999999 999999999999976665  359999999999999766643  48999999


Q ss_pred             HHchhhhhhcCCCCC------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093          292 FTSFNGPDFYGLPRN------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI  346 (346)
Q Consensus       292 ~~s~nPAki~gl~~k------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~  346 (346)
                      ++|.||||+|||+.+      +|||+|+|  ++|+|++++++|+++|||| +|++++|||+++
T Consensus       355 ~~s~nPA~~lgl~~G~i~~G~~ADlvi~d~~~~~~v~~~~~~s~~~~sp~-~G~~l~G~v~~t  416 (418)
T PRK07369        355 ALSTNPARCLGQEPPSLAPGQPAELILFDPQKTWTVSAQTLHSLSRNTPW-LGQTLKGRVLQT  416 (418)
T ss_pred             HHHHhHHHHhCCCcCcccCCCcCCEEEEcCCCCEEECcccccCCCCCCCC-CCCEeeeEEEEE
Confidence            999999999999632      89999999  8999999999999999999 799999999863

>cd01302 Cyclic_amidohydrolases Cyclic amidohydrolases, including hydantoinase, dihydropyrimidinase, allantoinase, and dihydroorotase, are involved in the metabolism of pyrimidines and purines, sharing the property of hydrolyzing the cyclic amide bond of each substrate to the corresponding N-carbamyl amino acids

Probab=100.00  E-value=1.1e-74  Score=555.36  Aligned_cols=314  Identities=22%  Similarity=0.260  Sum_probs=276.3

Q ss_pred             eEEecCccccceecCC-Ccc-ccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-GDL-LKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTL   74 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~-~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~   74 (346)
                      ++||||+||+|||+|+ |.+ ++|||+|++     ||||||++|||+.|++++.+.++.+.+++++.+.  |||++|+++
T Consensus         1 ~~vlPG~iD~HvH~r~pg~~~~~e~~~t~t~aA~~GG~Ttv~~mpn~~p~~~~~~~~~~~~~~a~~~~~--~d~~~~~~~   78 (337)
T cd01302           1 LLVLPGFIDIHVHLRDPGGTTYKEDFESGSRAAAAGGVTTVIDMPNTGPPPIDLPAIELKIKLAEESSY--VDFSFHAGI   78 (337)
T ss_pred             CEecCCeeEeeeccCCCCCCCchhHHHHHHHHHHhCCCcEEEECCCCCCCCCcHHHHHHHHHHhCcCcE--eeEEEEEec
Confidence            4899999999999999 777 899999975     9999999999999999999999988888766544  899999887


Q ss_pred             EeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHH
Q 019093           75 YLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFI  154 (346)
Q Consensus        75 ~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av  154 (346)
                        +++.+.+||.++.++| +.|||+|+++.  .+.....++ ..++++|+++++.|+++++|||                
T Consensus        79 --~~~~~~~el~~l~~~G-v~g~K~f~~~~--~~~~~~~~~-~~l~~~~~~~~~~g~~v~~H~E----------------  136 (337)
T cd01302          79 --GPGDVTDELKKLFDAG-INSLKVFMNYY--FGELFDVDD-GTLMRTFLEIASRGGPVMVHAE----------------  136 (337)
T ss_pred             --cCccCHHHHHHHHHcC-CcEEEEEEecc--CCCccccCH-HHHHHHHHHHHhcCCeEEEeHH----------------
Confidence              5544688999998889 78999999642  111212344 7899999999999999999999                


Q ss_pred             HHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHH
Q 019093          155 DTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAV  232 (346)
Q Consensus       155 ~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL  232 (346)
                       +.+  .+++.+|+|+||+|+|+++++++|+++|  |.+||||||||||+|+++++..  +++++|||||||+++||++|
T Consensus       137 -r~~--~la~~~g~~l~i~Hiss~~~le~i~~ak~~g~~vt~ev~ph~L~l~~~~~~~--~~~~~k~~Pplr~~~~~~~L  211 (337)
T cd01302         137 -RAA--QLAEEAGANVHIAHVSSGEALELIKFAKNKGVKVTCEVCPHHLFLDESMLRL--NGAWGKVNPPLRSKEDREAL  211 (337)
T ss_pred             -HHH--HHHHHhCCcEEEEeCCCHHHHHHHHHHHHCCCcEEEEcChhhheeCHHHhhC--CCceEEEeCCCCCHHHHHHH
Confidence             455  6888899999999999999999999987  8999999999999999999864  46899999999999999999


Q ss_pred             HHHHHcCCccEEeecCCCCCCcccccc--CCC--CCCccchhHHHHHHHHHHHhc-CCHHHHHHHHchhhhhhcCC-CCC
Q 019093          233 VSAVTSGSRKFFLGTDSAPHERGRKEC--ACG--CAGIYNAPVALSLYAKVFEEM-GALDKLEAFTSFNGPDFYGL-PRN  306 (346)
Q Consensus       233 ~~al~~G~Id~~i~SDHaP~~~~~K~~--~~~--~~G~~g~e~~lp~l~~~~~~~-~~l~~lv~~~s~nPAki~gl-~~k  306 (346)
                      |++|++|.||+ |+|||+||+.++|..  +|.  .+|++|+|+.+|++++.+++. .+++++++++|.||||+||| +++
T Consensus       212 ~~~l~~G~id~-i~sDh~p~~~~~k~~~~~~~~a~~G~~g~e~~l~~~~~~~~~~~i~~~~~~~~~s~~pA~~~gl~~~g  290 (337)
T cd01302         212 WEGVKNGKIDT-IASDHAPHSKEEKESGKDIWKAPPGFPGLETRLPILLTEGVKRGLSLETLVEILSENPARIFGLYPKG  290 (337)
T ss_pred             HHHHhCCCCCE-EecCCCCCCHHHhccCCCcccCCCCcccHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCCCC
Confidence            99999999999 999999999988864  343  359999999999999766664 48999999999999999999 433


Q ss_pred             ------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093          307 ------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI  346 (346)
Q Consensus       307 ------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~  346 (346)
                            +|||+|||  .+|+|+.++++|+++|||| +|++++|||+++
T Consensus       291 ~i~~G~~ADlvi~d~~~~~~v~~~~~~s~~~~sp~-~G~~l~G~v~~t  337 (337)
T cd01302         291 TIAVGYDADLVIVDPKKEWKVTAEEIESKADWTPF-EGMEVTGKPVST  337 (337)
T ss_pred             ccccCCcCCEEEEeCCCcEEEcHHHhcccCCCCCc-CCcEEEEEEEEC
Confidence                  89999999  8999999999999999999 799999999874

Allantoinases catalyze the degradation of purines, while dihydropyrimidinases and hydantoinases, a microbial counterpart of dihydropyrimidinase, are involved in pyrimidine degradation. Dihydroorotase participates in the de novo synthesis of pyrimidines.

>cd01316 CAD_DHOase The eukaryotic CAD protein is a trifunctional enzyme of carbamoylphosphate synthetase-aspartate transcarbamoylase-dihydroorotase, which catalyzes the first three steps of de novo pyrimidine nucleotide biosynthesis

Probab=100.00  E-value=2.3e-74  Score=552.67  Aligned_cols=312  Identities=17%  Similarity=0.224  Sum_probs=263.9

Q ss_pred             eEEecCccccceecCC-CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLY   75 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~   75 (346)
                      ++||||+||+|||+|+ |.+++|||+|+|     ||||||++||||.|++++.+.++.+.+++++.+.  +||++|+++ 
T Consensus         2 ~~vlPG~ID~HvH~r~pg~~~~ed~~sgs~AAa~GGvTtv~dmPnt~P~~~~~~~~~~~~~~a~~~s~--vd~~~~~~~-   78 (344)
T cd01316           2 TIRLPGLIDVHVHLREPGATHKEDFASGTKAALAGGFTMVRAMPNTNPSIVDVASLKLVQSLAQAKAR--CDYAFSIGA-   78 (344)
T ss_pred             eEEeCCeEEeeeccCCCCcCCcChHHHHHHHHHhCCCeEEEECCCCCCCCCCHHHHHHHHHHhccCcE--EeEEEEeee-
Confidence            6899999999999999 999999999975     9999999999999999999999999888776554  999999776 


Q ss_pred             eCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHH
Q 019093           76 LTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFID  155 (346)
Q Consensus        76 ~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~  155 (346)
                       +.+ +.+++.+|.. + +.|||+|+.+.  .....+++  ...++.+.+....+.++.+|+|+.            .+.
T Consensus        79 -~~~-~~~~~~~l~~-~-~~g~k~f~~~~--~~~~~~~~--~~~~~~~~~~~~~~~p~~~~~e~~------------~~~  138 (344)
T cd01316          79 -TST-NAATVGELAS-E-AVGLKFYLNET--FSTLILDK--ITAWASHFNAWPSTKPIVTHAKSQ------------TLA  138 (344)
T ss_pred             -cCC-CHHHHHHHHh-c-cCeEEEEECCC--CCCCccch--HHHHHHHHHhcccCCCeEEehhhH------------HHH
Confidence             443 4566777754 3 58999998542  11222334  233344444545588999999975            356


Q ss_pred             HHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHH
Q 019093          156 TILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVV  233 (346)
Q Consensus       156 ~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~  233 (346)
                      +++  .+++.+|+|+||+|+||++++++|+++|  |.+||||||||||+||++++..    +.+|||||||+++||++||
T Consensus       139 ~~l--~la~~~g~~lhi~HiSt~~~~~~i~~ak~~g~~vt~ev~phhL~l~~~~~~~----~~~k~~PPLR~~~dr~aL~  212 (344)
T cd01316         139 AVL--LLASLHNRSIHICHVSSKEEINLIRLAKARGLKVTCEVSPHHLFLSQDDLPR----GQYEVRPFLPTREDQEALW  212 (344)
T ss_pred             HHH--HHHHHHCCCEEEEeCCCHHHHHHHHHHHHCCCcEEEEechHHeeccHHHhhc----CCceeCCCCcCHHHHHHHH
Confidence            778  8999999999999999999999999988  7899999999999999999853    5799999999999999999


Q ss_pred             HHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHh-cCCHHHHHHHHchhhhhhcCCCCCCccEEE
Q 019093          234 SAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEE-MGALDKLEAFTSFNGPDFYGLPRNTSKIKL  312 (346)
Q Consensus       234 ~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~-~~~l~~lv~~~s~nPAki~gl~~kdAdlvi  312 (346)
                      ++|.  +||+ |+||||||+.++|..+...+|++|+|++||++|+.+.+ +++|+++++++|.||||+|||+.+++||+|
T Consensus       213 ~~l~--~id~-i~SDHaP~~~~~K~~~~a~~G~~g~e~~lpl~~~~v~~~~i~l~~l~~~~s~nPAk~~gl~~~~~~lvi  289 (344)
T cd01316         213 ENLD--YIDC-FATDHAPHTLAEKTGNKPPPGFPGVETSLPLLLTAVHEGRLTIEDIVDRLHTNPKRIFNLPPQSDTYVE  289 (344)
T ss_pred             HHHh--cCCE-EEcCCCCCCHHHhcCCCCCCCcccHHHHHHHHHHHHHcCCCCHHHHHHHHHHhHHHHhCCCCCCCCEEE
Confidence            9994  6999 99999999999986443346999999999999986444 358999999999999999999544579999


Q ss_pred             Ee--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093          313 TK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI  346 (346)
Q Consensus       313 ~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~  346 (346)
                      ||  ++|+|+++.++|+++|||| +|++++|+|+++
T Consensus       290 ~d~~~~~~v~~~~~~s~~~~sp~-~G~~l~G~v~~t  324 (344)
T cd01316         290 VDLDEEWTIPKNPLQSKKGWTPF-EGKKVKGKVQRV  324 (344)
T ss_pred             EeCCCcEEEChhhccccCCCCCC-CCCEEeeEEEEE
Confidence            99  9999999999999999999 799999999863

Dihydroorotase (DHOase) catalyzes the third step, the reversible interconversion of carbamoyl aspartate to dihydroorotate.

>PRK09059 dihydroorotase; Validated

Probab=100.00  E-value=3.1e-74  Score=567.94  Aligned_cols=326  Identities=18%  Similarity=0.181  Sum_probs=282.7

Q ss_pred             eEEecCccccceecCC-CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLY   75 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~   75 (346)
                      ++|+||+||+|+|+++ +.++++++.+++     |||||+++|||+.|+.++.+.++.+.+.+++.+.  +||.+++++.
T Consensus        56 ~~v~PG~ID~HvH~~~~~~~~~e~~~~~s~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~~~~~~~--vd~~~~~~~~  133 (429)
T PRK09059         56 KAVAPGLVDARVFVGEPGAEHRETIASASRAAAAGGVTSIIMMPDTDPVIDDVALVEFVKRTARDTAI--VNIHPAAAIT  133 (429)
T ss_pred             CEEeccEEecccccCCCCchhhhhHHHHHHHHHhCCcEEEEeccCCCCCCCCHHHHHHHHHHhcccCc--ccEEEEeEEe
Confidence            4799999999999998 777889997754     9999999999999999999988888887765444  8999998873


Q ss_pred             eC-CCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC------C---
Q 019093           76 LT-DTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV------D---  145 (346)
Q Consensus        76 ~~-~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~------~---  145 (346)
                      .+ .+.+.+++.+|.+.| +++||.+        +.++.|. ..++++|++++++|+++++||||.+++.      +   
T Consensus       134 ~~~~~~~l~e~~~l~~~G-v~~f~~~--------~~~~~~~-~~l~~~~~~~~~~~~~v~~H~E~~~l~~~~~~~~~~~~  203 (429)
T PRK09059        134 KGLAGEEMTEFGLLRAAG-AVAFTDG--------RRSVANT-QVMRRALTYARDFDAVIVHETRDPDLGGNGVMNEGLFA  203 (429)
T ss_pred             cCCCCcchHHHHHHHhcC-cEEEecC--------CcccCCH-HHHHHHHHHHHhcCCEEEEecCChhhhcCCCcCCcHHH
Confidence            21 123467888888888 6777622        2334465 6799999999999999999999998742      1   


Q ss_pred             --------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccCCCCC
Q 019093          146 --------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQGGLRP  215 (346)
Q Consensus       146 --------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~~~~~  215 (346)
                              +..+|..+++|++  .+|+.+|+|+||+|+||++++++|+++|  |.+||||||||||+|+++++..  +++
T Consensus       204 ~~~~~~~rP~~aE~~av~r~~--~la~~~~~~~hi~hvs~~~~~~~i~~ak~~g~~vt~ev~phhL~l~~~~~~~--~~~  279 (429)
T PRK09059        204 SWLGLSGIPREAEVIPLERDL--RLAALTRGRYHAAQISCAESAEALRRAKDRGLKVTAGVSINHLSLNENDIGE--YRT  279 (429)
T ss_pred             HHcCCCCCCHHHHHHHHHHHH--HHHHHHCCcEEEEecCCHHHHHHHHHHHHCCCCEEEeecHHHHhccHHHHhc--cCC
Confidence                    2458999999999  8999999999999999999999999987  7899999999999999999864  568


Q ss_pred             ceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCC--CCCccchhHHHHHHHHHHHh-cCCHHHHHHH
Q 019093          216 HNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACG--CAGIYNAPVALSLYAKVFEE-MGALDKLEAF  292 (346)
Q Consensus       216 ~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~--~~G~~g~e~~lp~l~~~~~~-~~~l~~lv~~  292 (346)
                      .+|||||||+++||++||++|++|+||+ |+|||+||+.++|..+|+  .+|++|+|+++|++++...+ ..++++++++
T Consensus       280 ~~kvnPPLR~~~d~~~L~~~l~~g~id~-i~sDh~p~~~~~K~~~~~~~~~G~~gle~~l~~~~~~v~~~~l~l~~~~~~  358 (429)
T PRK09059        280 FFKLSPPLRTEDDRVAMVEAVASGTIDI-IVSSHDPQDVDTKRLPFSEAAAGAIGLETLLAAALRLYHNGEVPLLRLIEA  358 (429)
T ss_pred             ccEEcCCCCCHHHHHHHHHHHHcCCCcE-EEeCCCCCCHHHCcCChhhCCCCcccHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence            9999999999999999999999999999 999999999999976665  35999999999999875444 3589999999


Q ss_pred             HchhhhhhcCCCCC------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEE
Q 019093          293 TSFNGPDFYGLPRN------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL  345 (346)
Q Consensus       293 ~s~nPAki~gl~~k------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~  345 (346)
                      +|.||||+|||+.+      +|||||||  ++|+|+++.++|+++|||| +|++++|||++
T Consensus       359 ~s~nPA~~~gl~~G~l~~G~~ADlvl~d~~~~~~v~~~~~~s~~~~sPf-~G~~l~G~v~~  418 (429)
T PRK09059        359 LSTRPAEIFGLPAGTLKPGAPADIIVIDLDEPWVVDPEDLKSRSKNTPF-EEARFQGRVVR  418 (429)
T ss_pred             HhHHHHHHhCCCcCcccCCCcCCEEEECCCCCEEECcccCccCCCCCCC-CCCEEeeEEEE
Confidence            99999999999642      89999999  9999999999999999999 79999999975

>cd01294 DHOase Dihydroorotase (DHOase) catalyzes the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in the pyrimidine biosynthesis

Probab=100.00  E-value=6.7e-74  Score=549.75  Aligned_cols=323  Identities=60%  Similarity=0.968  Sum_probs=271.6

Q ss_pred             EecCccccceecCCCccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhC-CCCccEEEEEEEEeC
Q 019093            4 TLTQPDDWHLHLRDGDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKAL-PASSNFTPLMTLYLT   77 (346)
Q Consensus         4 vlPG~ID~HvH~r~g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~-~~~vd~~~~~~~~~~   77 (346)
                      -+||+||+|||+|++    |++.+++     || ||+++|||+.|+.++.+.++.++.++.+.+ .  +||.+++++..+
T Consensus         2 ~~Pg~iD~h~h~~~~----~~~~~~~~aa~~gG-Ttvv~mpnt~P~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~   74 (335)
T cd01294           2 TIPRPDDMHLHLRDG----AMLKLVLPYTARGF-SRAIVMPNLKPPVTTTADALAYRERILAADPG--PNFTPLMTLYLT   74 (335)
T ss_pred             cCCCcceeEecCCCc----hHHHHHHHHHHhCC-CEEEECCCCCCCCCCHHHHHHHHHHHHhcCCC--CcEEEEEEEecc
Confidence            589999999999974    7777654     99 999999999999988887888877776544 3  688887776434


Q ss_pred             CCCCHHHHHHHHHc-CCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHH
Q 019093           78 DTTSPDEIKLARKT-GVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDT  156 (346)
Q Consensus        78 ~~~~~~el~~l~~~-G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~  156 (346)
                      ++...+||.++.+. | ++|||+||.+....++.++.|+ ..++++|++++++|++|++||||..+.......|.+.+.+
T Consensus        75 ~~~~~~el~~~~~~~G-~~g~Klf~~~~~~~~~~~~~d~-~~l~~~~e~~~~~g~~V~vHaE~~~l~~~~~~~e~~~~~~  152 (335)
T cd01294          75 ENTTPEELREAKKKGG-IRGVKLYPAGATTNSQGGVTDL-EKIYPVLEAMQKLGMPLLVHGEVPDFKIDVLDREAKFIPV  152 (335)
T ss_pred             CCCCHHHHHHHHHhCC-ceEEEEecCCCccCCCCCcCCH-HHHHHHHHHHHHcCCeEEEecCCCcccccchhhHHHHHHH
Confidence            44357899999876 8 8999999853222223345555 7999999999999999999999987643344566667777


Q ss_pred             HHHHHHHh-CCCCcEEEEccCCHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHH
Q 019093          157 ILQPLIQR-LPQLKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSA  235 (346)
Q Consensus       157 ~l~~~la~-~~g~~lhi~HvSt~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~a  235 (346)
                      ++  .+|+ ++|+|+||+|+||++++++|+++|. +||||||||||+||++++...++|+++|||||||+++||++||++
T Consensus       153 ~~--~lA~~~p~~~v~i~Hvst~~~~~~i~~ak~-~vt~Et~ph~L~l~~~~~~~~~~g~~~k~~PPlR~~~d~~~L~~~  229 (335)
T cd01294         153 LE--PLAQRFPKLKIVLEHITTADAVEYVKSCNE-NVAATITPHHLLLTRDDLLGGGLNPHLYCKPVAKRPEDREALRKA  229 (335)
T ss_pred             HH--HHHHHcCCCeEEEecccHHHHHHHHHhCCC-CcEEEEchhHheeeHHHhcCCCCCCCeEEcCCCCCHHHHHHHHHH
Confidence            77  6777 5799999999999999999999986 899999999999999998642246899999999999999999999


Q ss_pred             HHcCCcc-EEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHchhhhhhcCCCCCCccEEEEe
Q 019093          236 VTSGSRK-FFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLPRNTSKIKLTK  314 (346)
Q Consensus       236 l~~G~Id-~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~~~~l~~lv~~~s~nPAki~gl~~kdAdlvi~d  314 (346)
                      |++|+|| + |+||||||+.++|..+++.+|++++|+++|+++++.++++++++++++||+||||+|||+.++++|+++|
T Consensus       230 l~~G~id~~-i~SDHaP~~~~~K~~~~g~~Gi~~~~~~l~~~~~~~~~~l~l~~~v~~~s~nPA~i~gl~~~kg~i~~~~  308 (335)
T cd01294         230 ATSGHPKFF-LGSDSAPHPKSNKESSCGCAGIFSAPIALPYLAEVFEEHNALDKLEAFASDNGPNFYGLPPNKKTITLVK  308 (335)
T ss_pred             HHcCCCCeE-EECCCCCCCCccccCCCCCccccCHHHHHHHHHHHHhccCCHHHHHHHHHhHHHHHhCCCCCCCeEEEEe
Confidence            9999999 8 8999999999999877777899999999999987666667999999999999999999943369999999


Q ss_pred             cceeecCCccccCCcccccCCCcEE
Q 019093          315 IPWKVPEAFSFSFGDIIPMFAGNTL  339 (346)
Q Consensus       315 ~~~~v~~~~~~s~~~~sp~~~G~~l  339 (346)
                      ++|+|++++++|+++||||..|.++
T Consensus       309 ~~~~v~~~~~~s~~~~sp~~g~~~~  333 (335)
T cd01294         309 EPWKVPEKIPFGNNGVVPFRAGETL  333 (335)
T ss_pred             eceEcCchhccCCCceecccCCccC
Confidence            9999999999999999999433444

In contrast to the large polyfunctional CAD proteins of higher organisms, this group of DHOases is monofunctional and mainly dimeric.

>cd01318 DHOase_IIb Dihydroorotase (DHOase), subgroup IIb; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis

Probab=100.00  E-value=4.5e-74  Score=555.29  Aligned_cols=323  Identities=20%  Similarity=0.244  Sum_probs=281.9

Q ss_pred             eEEecCccccceecCC-CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLY   75 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~   75 (346)
                      ++|+||+||+|||+|+ |.+++|||.|++     ||||||++|||+.|++++.+.++.+.+++++.+.  |||++|+++ 
T Consensus         2 ~~vlPG~iD~HvH~r~pg~~~~ed~~s~t~aA~~GGvTtv~~mPnt~P~~~~~~~~~~~~~~a~~~~~--vd~~~~~~~-   78 (361)
T cd01318           2 LLILPGVIDIHVHFREPGLTYKEDFVSGSRAAAAGGVTTVMDMPNTKPPTTTAEALYEKLRLAAAKSV--VDYGLYFGV-   78 (361)
T ss_pred             CEEecCeeEeeecCCCCCCCccCcHHHHHHHHHcCCCEEEEECCCCCCCCCcHHHHHHHHHHhccCce--eEEEEEEee-
Confidence            5899999999999999 899999999975     9999999999999999999999998888766544  999999886 


Q ss_pred             eCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC-----------
Q 019093           76 LTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV-----------  144 (346)
Q Consensus        76 ~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~-----------  144 (346)
                       +++   +++.++.+.| +.|||+|+++..  .... .++ ..|+++|++++   +++++||||+++..           
T Consensus        79 -~~~---~~l~~~~~~~-~~g~k~f~~~~~--~~~~-~~~-~~l~~~~~~~~---~~v~~H~E~~~l~~~~~~~~~~~~~  146 (361)
T cd01318          79 -TGS---EDLEELDKAP-PAGYKIFMGDST--GDLL-DDE-ETLERIFAEGS---VLVTFHAEDEDRLRENRKELKGESA  146 (361)
T ss_pred             -cCh---hhHHHHHHhh-CcEEEEEEecCC--CCcC-CCH-HHHHHHHHhcC---CeEEEeCCChHHHHHHHhhhhhccC
Confidence             442   4577777778 789999985311  1122 355 89999999985   78999999987631           


Q ss_pred             ----ChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEe
Q 019093          145 ----DIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCL  220 (346)
Q Consensus       145 ----~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~  220 (346)
                          .+..+|..+++|++  .+|+.+|+|+||+|+||++++++|+++| .+||||||||||+|+++++.+  +|+++||+
T Consensus       147 ~~~~~P~~aE~~av~r~~--~la~~~~~~~hi~Hvs~~~~~~~i~~~k-~~vt~ev~ph~L~l~~~~~~~--~~~~~k~~  221 (361)
T cd01318         147 HPRIRDAEAAAVATARAL--KLARRHGARLHICHVSTPEELKLIKKAK-PGVTVEVTPHHLFLDVEDYDR--LGTLGKVN  221 (361)
T ss_pred             CCCcCCHHHHHHHHHHHH--HHHHHHCCCEEEEeCCCHHHHHHHHHhC-CCeEEEeCHHHhhcCHHHHhc--CCCeEEEe
Confidence                12468999999999  8999999999999999999999999998 789999999999999999863  56899999


Q ss_pred             CCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCC--CCCccchhHHHHHHHHHHHhc-CCHHHHHHHHchhh
Q 019093          221 PVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACG--CAGIYNAPVALSLYAKVFEEM-GALDKLEAFTSFNG  297 (346)
Q Consensus       221 PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~--~~G~~g~e~~lp~l~~~~~~~-~~l~~lv~~~s~nP  297 (346)
                      ||||+++||++||++|++|+||+ |+|||+||+.++|..+|.  .+|++|+|+++|++++...+. .+++++++++|.||
T Consensus       222 PPlr~~~d~~aL~~~l~~G~id~-i~SDh~P~~~~~k~~~~~~a~~G~~g~e~~l~~~~~~v~~~~l~l~~a~~~~t~nP  300 (361)
T cd01318         222 PPLRSREDRKALLQALADGRIDV-IASDHAPHTLEEKRKGYPAAPSGIPGVETALPLMLTLVNKGILSLSRVVRLTSHNP  300 (361)
T ss_pred             CCCCCHHHHHHHHHHHhCCCCCE-EeeCCCCCCHHHccCChhhCCCCCccHHHHHHHHHHHHHcCCCCHHHHHHHHhHHH
Confidence            99999999999999999999999 999999999999987654  359999999999998765543 59999999999999


Q ss_pred             hhhcCCCC-C------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093          298 PDFYGLPR-N------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI  346 (346)
Q Consensus       298 Aki~gl~~-k------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~  346 (346)
                      ||+||++. +      +|||+|||  .+|+|++++++|+++|||| +|++++|||+++
T Consensus       301 A~~lgl~~~G~i~~G~~ADlvv~d~~~~~~v~~~~~~s~~~~tp~-~G~~l~G~v~~t  357 (361)
T cd01318         301 ARIFGIKNKGRIAEGYDADLTVVDLKEERTIRAEEFHSKAGWTPF-EGFEVTGFPVMT  357 (361)
T ss_pred             HHHhCCCCCCccCCCCcCCEEEEeCCCCEEECHHHccccCCCCCC-CCCEEeeEEEEE
Confidence            99999964 2      89999999  9999999999999999999 799999999863

This group contains the archeal members of the DHOase family.

>TIGR00856 pyrC_dimer dihydroorotase, homodimeric type

Probab=100.00  E-value=3.3e-72  Score=537.46  Aligned_cols=338  Identities=58%  Similarity=0.972  Sum_probs=281.6

Q ss_pred             eEEecCccccceecCCCccccccccccCCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCC
Q 019093            2 ELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTS   81 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~g~~~ke~~~s~sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~   81 (346)
                      ++.+|-.-|+|+|+|++.+-+-......-|||++++|||+.|+.++.+.++.+.+++++.+...+||.+|+++..+.+..
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vt~vv~mPnt~P~~~~~e~~~~~~~~~~~~s~~~vDf~~~~~v~~~~~~~   80 (341)
T TIGR00856         1 ELTIRRPDDWHLHLRDGAMLKAVLPYTSEIFSRAIVMPNLAPPVTTVEAAVAYRERILDAVPAGHDFTPLMTLYLTDSLT   80 (341)
T ss_pred             CceecCccceeeeccCchHHHHHHHHHHhhcCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcceEEEEEEECCCCCC
Confidence            36789999999999996555554444445599999999999999999999999888877653126999999985433335


Q ss_pred             HHHHHHHHHc-CCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHH
Q 019093           82 PDEIKLARKT-GVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQP  160 (346)
Q Consensus        82 ~~el~~l~~~-G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~  160 (346)
                      .+||.++.++ | +.|||+||++....++.++.|+ +.++++|++++++|+++++||||..........|..++.+.+. 
T Consensus        81 ~~Ei~~l~~~~G-v~g~Klf~~~~~~~~~~~v~dd-~~l~~~~e~~~e~g~~v~vHaEd~~~~i~~~~~e~~a~~~~i~-  157 (341)
T TIGR00856        81 PEELERAKNEGV-VRAVKLYPAGATTNSSHGVTDI-DAIMPVLEAMEKIGLPLLLHGEVTHGDIDIFDREARFIESVLE-  157 (341)
T ss_pred             HHHHHHHHHcCC-eEEEEEccCCcccCCCcCCCCH-HHHHHHHHHHHHcCCeEEEeecCCCCCcccccchhhhhHHHHH-
Confidence            7899999877 8 8999999864322234556676 7999999999999999999999973111223346666665553 


Q ss_pred             HHH-hCCCCcEEEEccCCHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcC
Q 019093          161 LIQ-RLPQLKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSG  239 (346)
Q Consensus       161 ~la-~~~g~~lhi~HvSt~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G  239 (346)
                      .+| +++|+|+||+|+||++++++|+++|+ +||||||||||+||++++...++|+.+|||||||+++||++||++|++|
T Consensus       158 ~lA~~~~~~~~~i~H~st~~~~~~i~~a~~-~vt~E~~ph~L~l~~~~~~~~~~~~~~k~~PPlR~~~d~~aL~~~l~~G  236 (341)
T TIGR00856       158 PLRQRFPALKVVLEHITTKDAIDYVEDGNN-RLAATITPQHLMFTRNDLLGGGVNPHLYCLPILKRNIHQQALLELAASG  236 (341)
T ss_pred             HHHHHccCCeEEEEecCcHHHHHHHHHcCC-CEEEEEcHHHHhccHHHHhccCCCCceEEeCCCCCHHHHHHHHHHHHcC
Confidence            344 68899999999999999999999985 5999999999999999986422568999999999999999999999999


Q ss_pred             Ccc-EEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHchhhhhhcCCCCCCccEEEEeccee
Q 019093          240 SRK-FFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLPRNTSKIKLTKIPWK  318 (346)
Q Consensus       240 ~Id-~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~~~~l~~lv~~~s~nPAki~gl~~kdAdlvi~d~~~~  318 (346)
                      +|| + |+||||||+.++|..+...+|++|+|+++|++++++.+.++++++++++|+||||+|||++|||||+|||++|+
T Consensus       237 ~id~~-i~SDHaP~~~~~K~~~~~~~G~~g~e~~l~~~~~~~~~~~~l~~~v~~~s~nPAk~~gl~~~dAdi~~~~~~~~  315 (341)
T TIGR00856       237 FPKFF-LGTDSAPHARHRKESSCGCAGCFSAPTALPSYAEVFEEMNALENLEAFCSDNGPQFYGLPVNSTKIELVKKEQQ  315 (341)
T ss_pred             CCCEE-EeCCCCCCChhHcCCCCCCCCcccHHHHHHHHHHHHhcCCCHHHHHHHHhHhHHHHhCCCCCCceEEEEeccEE
Confidence            999 8 99999999999997543346999999999999877655569999999999999999999767999999999999


Q ss_pred             ecCCccccCCcccccCCCcEEEEEEE
Q 019093          319 VPEAFSFSFGDIIPMFAGNTLEWQPS  344 (346)
Q Consensus       319 v~~~~~~s~~~~sp~~~G~~l~G~v~  344 (346)
                      |+++.++|+++||||..|++++|+|.
T Consensus       316 i~~~~~~s~~~~sp~~~~~~~~~~v~  341 (341)
T TIGR00856       316 IPESIALTDDTLVPFRAGETLSWSVK  341 (341)
T ss_pred             eCchhccCCCCcccccCCcccceeeC
Confidence            99999999999999977999999984

This homodimeric form of dihydroorotase is less common in microbial genomes than a related dihydroorotase that appears in a complex with aspartyltranscarbamoylase or as a homologous domain in multifunctional proteins of pyrimidine biosynthesis in higher eukaryotes.

>PRK01211 dihydroorotase; Provisional

Probab=100.00  E-value=2.1e-73  Score=557.28  Aligned_cols=306  Identities=20%  Similarity=0.255  Sum_probs=257.9

Q ss_pred             EEecCccccceecCC-CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEe
Q 019093            3 LTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYL   76 (346)
Q Consensus         3 ~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~   76 (346)
                      +||||+||+|||+|+ |++++|||.|+|     ||||||++||||.|++++.+.++.+++++++.+.  |||++|+++  
T Consensus        43 ~vlPG~ID~HvH~r~pg~~~ked~~s~s~AAaaGGvTtv~dmPnt~P~~~~~e~~~~~~~~a~~~s~--vd~~~~~~~--  118 (409)
T PRK01211         43 AILPAATDIHVHFRTPGETEKEDFSTGTLSAIFGGTTFIMDMPNNNIPIKDYNAFSDKLGRVAPKAY--VDFSLYSME--  118 (409)
T ss_pred             EEcCCeEEeeeccCCCCCcccCcHHHHHHHHHcCCcEEEEECCCCCCCCChHHHHHHHHHHhccCce--eeEEEEecc--
Confidence            699999999999999 999999999975     9999999999999999999999999888766554  999999875  


Q ss_pred             CCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCC-----------
Q 019093           77 TDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVD-----------  145 (346)
Q Consensus        77 ~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~-----------  145 (346)
                      +++ + .++   .+.| +.|||+||++.....+.      ....+.|++++++|+++++||||++++..           
T Consensus       119 ~~~-~-~~~---~~~g-~~~~k~f~~~~~~~~~~------~~~~~~l~~~~~~g~~v~~H~E~~~l~~~~~~~~~~~~~~  186 (409)
T PRK01211        119 TGN-N-ALI---LDER-SIGLKVYMGGTTNTNGT------DIEGGEIKKINEANIPVFFHAELSECLRKHQFESKNLRDH  186 (409)
T ss_pred             CCc-h-hhH---Hhcc-CcEEEEEcCCCcCCCcc------ccCHHHHHHHHccCCEEEEeccChHHhhhhhhCcchHhhC
Confidence            432 2 233   3347 78999998642111111      12234667888999999999999887421           


Q ss_pred             ----hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeC
Q 019093          146 ----IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLP  221 (346)
Q Consensus       146 ----~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~P  221 (346)
                          +..+|.+++.+++  .++++   ++||+|+||++++        .+||||||||||+||+++ .   +++.+||||
T Consensus       187 ~~~rP~~aE~~ai~~~~--~la~~---~~hi~HvSt~~~~--------~~vt~Ev~phhL~l~~~~-~---~~~~~kvnP  249 (409)
T PRK01211        187 DLARPIECEIKAVKYVK--NLDLK---TKIIAHVSSIDVI--------GRFLREVTPHHLLLNDDM-P---LGSYGKVNP  249 (409)
T ss_pred             CCCCCHHHHHHHHHHHH--HHhCC---CcEEEEecChhhc--------CceEEEecHHHHcccccc-c---cCCceeEcC
Confidence                2468999999999  78887   6999999999998        279999999999999987 2   468999999


Q ss_pred             CCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCC--CCCccchhHHHHHHHHHHHhc-CCHHHHHHHHchhhh
Q 019093          222 VLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACG--CAGIYNAPVALSLYAKVFEEM-GALDKLEAFTSFNGP  298 (346)
Q Consensus       222 PLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~--~~G~~g~e~~lp~l~~~~~~~-~~l~~lv~~~s~nPA  298 (346)
                      |||+++||++||++|++|+||+ |+||||||+.++|. +|.  .+|++|+|++||+||+...++ ++++++++++|.|||
T Consensus       250 PLRs~~d~~aL~~~l~dG~ID~-i~SDHaP~~~~eK~-~~~~a~~G~~gle~~lpl~~~~v~~~~isl~~~v~~~s~nPA  327 (409)
T PRK01211        250 PLRDRWTQERLLEEYISGRFDI-LSSDHAPHTEEDKQ-EFEYAKSGIIGVETRVPLFLALVKKKILPLDVLYKTAIERPA  327 (409)
T ss_pred             CCCCHHHHHHHHHHHhCCCCCE-EeCCCCCCChhHhC-CHhhCCCCCCcHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence            9999999999999999999999 99999999999983 444  469999999999999754443 589999999999999


Q ss_pred             hhcCCCCC------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEE
Q 019093          299 DFYGLPRN------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL  345 (346)
Q Consensus       299 ki~gl~~k------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~  345 (346)
                      |+|||+++      +|||||||  ++|+|+.+.++|+++|||| +|++++ +|.+
T Consensus       328 ki~gl~kG~l~~G~~ADlvi~D~~~~~~v~~~~~~s~~~~spf-~G~~~~-~v~~  380 (409)
T PRK01211        328 SLFGIKKGKIEEGYDADFMAFDFTNIKKINDKRLHSKCPVSPF-NGFDAI-FPSH  380 (409)
T ss_pred             HHhCCCCCcccCCCcCCEEEEcCCCeEEEChHHhhccCCCCCC-CCCEec-cEEE
Confidence            99999532      89999999  8999999999999999999 799987 7765

>PRK07627 dihydroorotase; Provisional

Probab=100.00  E-value=5.2e-72  Score=551.54  Aligned_cols=326  Identities=17%  Similarity=0.151  Sum_probs=280.0

Q ss_pred             eEEecCccccceecCC-CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLY   75 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~   75 (346)
                      ++|+||+||+|||+|+ |..++|++++++     ||||||++|||+.|+.++.+.++.+.++.+..+.  +++.+++.+.
T Consensus        51 ~~vlPG~iD~H~H~~~~g~~~~e~~~t~s~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  128 (425)
T PRK07627         51 LIVCPGLVDLSARLREPGYEYKATLESEMAAAVAGGVTSLVCPPDTDPVLDEPGLVEMLKFRARNLNQ--AHVYPLGALT  128 (425)
T ss_pred             CEEeccEEeccccccCCCccccCcHHHHHHHHHhCCeeEEEeCCCCCCCCCCHHHHHHHHHHhhccCc--eeEEEeCeEE
Confidence            4899999999999999 888899998864     9999999999999999988877776665544333  7766665542


Q ss_pred             eC-CCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC------C---
Q 019093           76 LT-DTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV------D---  145 (346)
Q Consensus        76 ~~-~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~------~---  145 (346)
                      .. .+.+.+++.+|.+.| +++||.|.        ....++ ..++++|++++++|+++++||||..+..      +   
T Consensus       129 ~g~~~~~~~~i~~l~~~G-~~~fk~~~--------~~~~~~-~~l~~~~~~~~~~~~~v~~H~E~~~~~~~~~~~~g~~~  198 (425)
T PRK07627        129 VGLKGEVLTEMVELTEAG-CVGFSQAN--------VPVVDT-QVLLRALQYASTFGFTVWLRPLDAFLGRGGVAASGAVA  198 (425)
T ss_pred             cCCCccCHHHHHHHHhCC-EEEEEcCC--------cccCCH-HHHHHHHHHHHhcCCEEEEecCChhhhhCCCcCCCHhH
Confidence            21 123578899998889 78999652        112344 7899999999999999999999987642      1   


Q ss_pred             --------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccCCCCC
Q 019093          146 --------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQGGLRP  215 (346)
Q Consensus       146 --------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~~~~~  215 (346)
                              +..+|..++.|++  .+|+.+|+|+||+|+||++++++|+++|  |.+||||||||||+|+++++..  +++
T Consensus       199 ~~~~~~~~P~~aE~~av~r~~--~la~~~~~~~hi~HvSs~~~~~~i~~ak~~g~~vt~Ev~ph~L~l~~~~~~~--~~~  274 (425)
T PRK07627        199 SRLGLSGVPVAAETIALHTIF--ELMRVTGARVHLARLSSAAGVALVRAAKAEGLPVTCDVGVNHVHLIDVDIGY--FDS  274 (425)
T ss_pred             HHcCCCCCCHHHHHHHHHHHH--HHHHHHCCcEEEEeCCCHHHHHHHHHHHHCCCCeEEEeccchheEeHhHHhc--cCC
Confidence                    2458999999999  8999999999999999999999999988  7899999999999999999864  468


Q ss_pred             ceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCC--CCCccchhHHHHHHHHHHHhc-CCHHHHHHH
Q 019093          216 HNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACG--CAGIYNAPVALSLYAKVFEEM-GALDKLEAF  292 (346)
Q Consensus       216 ~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~--~~G~~g~e~~lp~l~~~~~~~-~~l~~lv~~  292 (346)
                      .+|||||||+++||++||++|++|+||+ |+||||||+.++|..+|.  .+|++|+|+.+|++++.+.+. .++++++++
T Consensus       275 ~~k~~PPLR~~~d~~~L~~~l~~G~id~-i~SDHaP~~~~~k~~~~~~~~~G~~g~e~~~pl~~~~~~~~~i~~~~~l~~  353 (425)
T PRK07627        275 QFRLDPPLRSQRDREAIRAALADGTIDA-ICSDHTPVDDDEKLLPFAEATPGATGLELLLPLTLKWADEAKVPLARALAR  353 (425)
T ss_pred             ceEEeCCCCCHHHHHHHHHHHhcCCCcE-EEcCCCCCCHHHccCCHhhCCCCceeHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence            9999999999999999999999999999 999999999999976665  359999999999988765553 589999999


Q ss_pred             HchhhhhhcCCCCC------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEE
Q 019093          293 TSFNGPDFYGLPRN------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL  345 (346)
Q Consensus       293 ~s~nPAki~gl~~k------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~  345 (346)
                      +|.|||++||++.+      +|||++||  .+|+++.++++|+++|||| +|++++|+|.+
T Consensus       354 ~t~~pA~~lg~~~G~l~~G~~ADlvv~d~~~~~~v~~~~~~s~~~~sp~-~g~~~~g~v~~  413 (425)
T PRK07627        354 ITSAPARVLGLPAGRLAEGAPADLCVFDPDAHWRVEPRALKSQGKNTPF-LGYELPGRVRA  413 (425)
T ss_pred             HHHHHHHHhCCCCCcccCCCcCCEEEECCCCcEEEChhhccccCCCCCC-cCCEeeeEEEE
Confidence            99999999998432      89999999  6899999999999999999 79999999975

>PRK05451 dihydroorotase; Provisional

Probab=100.00  E-value=3.4e-71  Score=532.17  Aligned_cols=338  Identities=64%  Similarity=1.063  Sum_probs=279.3

Q ss_pred             eEEecCccccceecCCCccccccccccC-CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCC
Q 019093            2 ELTLTQPDDWHLHLRDGDLLKAVVPHSV-SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTT   80 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~g~~~ke~~~s~s-GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~   80 (346)
                      ++.+|-.||+|||+|++.++| ++.+++ .++|++++|||+.|+.++.+.++.+.+++++.+...+||.+++++....+.
T Consensus         4 ~~~~~~~~d~h~hl~~~~~~~-~~~~~~~~~~t~~v~mPnt~P~~~~~~~l~~~~~~a~~~~~~~~d~~~~~~i~~~~~~   82 (345)
T PRK05451          4 TLTIRRPDDWHLHLRDGAMLK-AVVPYTARQFGRAIVMPNLVPPVTTVAQALAYRERILAALPAGSNFEPLMTLYLTDNT   82 (345)
T ss_pred             eEEecCcceEEEecCCchHHH-HHHHHHHHhcCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCCcEEEEEEEEeCCCC
Confidence            468899999999999986677 887776 689999999999999999999999988887654333799988887443323


Q ss_pred             CHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHH
Q 019093           81 SPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQP  160 (346)
Q Consensus        81 ~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~  160 (346)
                      ..+||.++.+.|++.|||+||++.....+.++.|+ ..++++|++++++|+++++||||.++.......|..++.+.+. 
T Consensus        83 ~~~El~~~~~~Gvv~g~Kl~~~~~~~~~~~~~~dd-~~l~~~~e~~~~~g~~V~vHaE~~~~~~~~~~~e~~~~~~~l~-  160 (345)
T PRK05451         83 DPDELERAKASGVVTAAKLYPAGATTNSDAGVTDI-EKIYPVLEAMQKLGMPLLVHGEVTDPDIDIFDREAVFIDRVLE-  160 (345)
T ss_pred             CHHHHHHHHHCCCEEEEEEecccCccCCccCcCCH-HHHHHHHHHHHHcCCEEEEecCCCCcccccccchHHHHHHHHH-
Confidence            47899999888955699999975221222334455 7999999999999999999999966522233446666766653 


Q ss_pred             HHH-hCCCCcEEEEccCCHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcC
Q 019093          161 LIQ-RLPQLKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSG  239 (346)
Q Consensus       161 ~la-~~~g~~lhi~HvSt~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G  239 (346)
                      .+| +++|+|+||+|+||++++++|++++ .+||||||||||+||++++...++++.+|||||||+++||++||++|++|
T Consensus       161 ~lA~~~pg~~lhI~Hlst~~~~e~i~~a~-~~it~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aLw~~l~~G  239 (345)
T PRK05451        161 PLRRRFPKLKIVFEHITTKDAVDYVREAN-DNLAATITPHHLLINRNDMLVGGIRPHLYCLPILKRETHRQALREAATSG  239 (345)
T ss_pred             HHHHhcCCCcEEEEecCcHHHHHHHHhcC-CCEEEEecHHHHhcCHHHHhCCCcCCCeEEeCCCCCHHHHHHHHHHHHcC
Confidence            477 5669999999999999999999884 79999999999999999986434568899999999999999999999999


Q ss_pred             Ccc-EEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHchhhhhhcCCCCCCccEEEEeccee
Q 019093          240 SRK-FFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLPRNTSKIKLTKIPWK  318 (346)
Q Consensus       240 ~Id-~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~~~~l~~lv~~~s~nPAki~gl~~kdAdlvi~d~~~~  318 (346)
                      +|| + |+||||||+.++|+.+++.+|+.+++..+|+++..++++++|+++++++|+||||+|||+.+++.|++.|++|+
T Consensus       240 ~Id~~-i~SDHaP~~~~~K~~~~G~~gi~~~~~g~~~~~~~~~~~~~l~~~v~~~s~nPAkifGl~~~KG~i~~~~~~~~  318 (345)
T PRK05451        240 NPKFF-LGTDSAPHARHAKESACGCAGIFSAPAALELYAEVFEEAGALDKLEAFASLNGPDFYGLPRNTDTITLVREPWT  318 (345)
T ss_pred             CCCEE-EeCCCCCCChHHhCCCCCCCchhhHHHHHHHHHHHHHcCCCHHHHHHHHhHHHHHHhCCCCCCCeEEEEeccee
Confidence            999 8 99999999999997544445555555588888877666679999999999999999999433589999999999


Q ss_pred             ecCCccccCCcccccCCCcEEEEEEE
Q 019093          319 VPEAFSFSFGDIIPMFAGNTLEWQPS  344 (346)
Q Consensus       319 v~~~~~~s~~~~sp~~~G~~l~G~v~  344 (346)
                      |+++.++|+++||||.+|.+|+|+|.
T Consensus       319 v~~~~~~s~~~~sp~~~~~~~~~~~~  344 (345)
T PRK05451        319 VPESIPFGDETVVPFRAGETLRWSVK  344 (345)
T ss_pred             cCcccccCCCceeeecCCceeeeEec
Confidence            99999999999999966999999985

>PLN02599 dihydroorotase

Probab=100.00  E-value=2e-70  Score=526.80  Aligned_cols=339  Identities=78%  Similarity=1.245  Sum_probs=291.1

Q ss_pred             eEEecCccccceecCCCccccccccccCCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCC
Q 019093            2 ELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTS   81 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~g~~~ke~~~s~sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~   81 (346)
                      ++.||-..|+|||+|+|.+-+......+||+|++++|||+.|++++.+.++.+++++++.+...+||.+|++++++++..
T Consensus        22 ~~~~~~~~d~h~hlr~~~~~~~~~~~~~gg~t~~i~MPn~~Ppv~~~~~~~~~~~~~~~~~~~~vdf~~~~~l~lt~~~~  101 (364)
T PLN02599         22 ELTITRPDDWHLHLRDGAKLAAVVPHSARHFGRAIVMPNLKPPVTTTARALAYRERIMKALPPGSSFEPLMTLYLTDNTT  101 (364)
T ss_pred             eEEecCCcceeeEccCcHHHHhhhHHhcCCcCEEEECCCCCCCcCCHHHHHHHHHHHhhhcCCCcceEEEEEEecCCCCC
Confidence            57899999999999998777777777789999999999999999999999999999877522238999999987665445


Q ss_pred             HHHHHHHHHcCCee-EEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHH
Q 019093           82 PDEIKLARKTGVVF-AVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQP  160 (346)
Q Consensus        82 ~~el~~l~~~G~v~-~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~  160 (346)
                      .+||.++.+.| |+ |||+||.+.+++++.++.|+ +.++++|++++++|+++++||||.+...+....|...+.|++..
T Consensus       102 l~Ei~~~~~~G-vv~gfKlyp~~~tt~s~~gv~d~-~~l~~~le~~~e~G~~L~vH~E~~~~~~~~~~~E~~~i~r~l~~  179 (364)
T PLN02599        102 PEEIKAAKASG-VVFAVKLYPAGATTNSQAGVTDL-GKCLPVLEEMAEQGMPLLVHGEVTDPSVDIFDREKVFIDTILAP  179 (364)
T ss_pred             HHHHHHHHHCC-CcEEEEECcccCcCCCccccCCH-HHHHHHHHHHHhcCCEEEEecCCCcccccccccHHHHHHHHHHH
Confidence            78999998889 66 99999976444555667776 89999999999999999999999775444455677777788755


Q ss_pred             HHHhCCCCcEEEEccCCHHHHHHHHccC-CCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcC
Q 019093          161 LIQRLPQLKVVMEHITTMDAVKFVESCK-EGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSG  239 (346)
Q Consensus       161 ~la~~~g~~lhi~HvSt~~~l~~i~~ak-g~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G  239 (346)
                      .+++++|+|+||+|+||++++++|+++| + +|+||||||||+||++++...++++.+|||||||+++||++||++|.+|
T Consensus       180 ~la~~~g~kI~i~HiSt~~~ve~v~~ak~~-~vtae~tpHhL~l~~~~~~~~~~~~~~k~~PPlR~~~dr~aL~~al~~G  258 (364)
T PLN02599        180 LVQKLPQLKIVMEHITTMDAVEFVESCGDG-NVAATVTPQHLLLNRNALFQGGLQPHNYCLPVLKREIHREALVKAATSG  258 (364)
T ss_pred             HHHhccCCeEEEEecChHHHHHHHHhccCC-CEEEEecHHHHhcCHHHHhccCCCCCeEEECCCCCHHHHHHHHHHHHcC
Confidence            6899999999999999999999999998 4 8999999999999999986544678899999999999999999999999


Q ss_pred             Cc-cEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHchhhhhhcCCCCCCccEEEEeccee
Q 019093          240 SR-KFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLPRNTSKIKLTKIPWK  318 (346)
Q Consensus       240 ~I-d~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~~~~l~~lv~~~s~nPAki~gl~~kdAdlvi~d~~~~  318 (346)
                      .| |+ |+||||||+.++|+.+++.+|+.++++.+|++++.+++.++|++|++++|.||||+|||+.++..|+|.+++|+
T Consensus       259 ~i~~~-i~SDHaPh~~~~K~~~~g~~Gi~~~~~~l~~l~~~~~~~g~l~~l~~~~S~npA~~~gL~~~kg~i~l~~~~~~  337 (364)
T PLN02599        259 SKKFF-LGTDSAPHPKRAKEASCGCAGIYSAPVALSLYAKAFEEAGALDKLEAFTSFNGPDFYGLPRNTSTITLVKSAWK  337 (364)
T ss_pred             CCCEE-EecCCCCCChHHhcCCCCCCCcccHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHhCCCCCCCeEEEEECCcc
Confidence            96 88 99999999999998767777888888899998888777679999999999999999999744589999999999


Q ss_pred             ecCCccccCCcccccCCCcEEEEEEE
Q 019093          319 VPEAFSFSFGDIIPMFAGNTLEWQPS  344 (346)
Q Consensus       319 v~~~~~~s~~~~sp~~~G~~l~G~v~  344 (346)
                      |.+.-..+.....||..|.+|.|+|+
T Consensus       338 ~~~~~~~~~~~~~p~~~~~~~~w~~~  363 (364)
T PLN02599        338 VPEAYSFGGGTVVPMFAGETIPWSVV  363 (364)
T ss_pred             CCCEeecCCCeEeeecCCCeeeeeec
Confidence            98654323333789989999999986

>PRK08417 dihydroorotase; Provisional

Probab=100.00  E-value=2.7e-71  Score=540.95  Aligned_cols=315  Identities=16%  Similarity=0.160  Sum_probs=267.8

Q ss_pred             eEEecCccccceecCC-CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLY   75 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~   75 (346)
                      ++|+||+||+|||+|+ +.+ +|+|+|++     ||||||++|||+.|++++.+.++.+.+++++.....+||.   .+.
T Consensus        26 ~~vlPG~ID~HvH~~~~~~~-~e~~~t~s~aA~aGGvTtv~dmpnt~P~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  101 (386)
T PRK08417         26 KTLLPALVDLNVSLKNDSLS-SKNLKSLENECLKGGVGSIVLYPDSTPAIDNEIALELINSAQRELPMQIFPSI---RAL  101 (386)
T ss_pred             CEEccCeeEEeeeeCCCCcC-hhhHHHHHHHHHcCCcEEEEeCCCCCCCCCCHHHHHHHHHHhhccCCcEEEEE---EEE
Confidence            5899999999999998 655 58998875     9999999999999999999988888776654211115553   231


Q ss_pred             eCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC------C----
Q 019093           76 LTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV------D----  145 (346)
Q Consensus        76 ~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~------~----  145 (346)
                       ..+.+.+++.++.+.| +.+||+|.         .. +. ..++++|+++++.|+++++||||.+++.      +    
T Consensus       102 -~~~~~~~~i~~l~~~G-v~~~k~~~---------~~-~~-~~l~~~~~~a~~~g~~V~~HaEd~~~~~~~~~~~g~~~~  168 (386)
T PRK08417        102 -DEDGKLSNIATLLKKG-AKALELSS---------DL-DA-NLLKVIAQYAKMLDVPIFCRCEDSSFDDSGVMNDGELSF  168 (386)
T ss_pred             -CCCccHHHHHHHHHCC-CEEEECCC---------CC-CH-HHHHHHHHHHHHcCCEEEEeCCCHHHhhHHHHhcChhhH
Confidence             2333577899998889 77988652         12 34 7899999999999999999999987632      1    


Q ss_pred             -------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccCCCCCc
Q 019093          146 -------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQGGLRPH  216 (346)
Q Consensus       146 -------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~~~~~~  216 (346)
                             +..+|..++.|++  .+|+.+|+|+||+|+||++++++|+++|  |.+||||||||||+||++++..  +++.
T Consensus       169 ~~~~~~rp~~aE~~~v~~~~--~la~~~~~~lhi~hvS~~~~~~~i~~ak~~g~~vt~ev~ph~L~l~~~~~~~--~~~~  244 (386)
T PRK08417        169 ELGLPGIPSIAETKEVAKMK--ELAKFYKNKVLFDTLALPRSLELLDKFKSEGEKLLKEVSIHHLILDDSACEN--FNTA  244 (386)
T ss_pred             HhCCCCCCHHHHHHHHHHHH--HHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCCEEEEechHHHeeCHHHhcC--cCcc
Confidence                   2468999999999  8999999999999999999999999887  7899999999999999999854  5689


Q ss_pred             eEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCC--CCCccchhHHHHHHHHHHHhc--CCHHHHHHH
Q 019093          217 NYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACG--CAGIYNAPVALSLYAKVFEEM--GALDKLEAF  292 (346)
Q Consensus       217 ~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~--~~G~~g~e~~lp~l~~~~~~~--~~l~~lv~~  292 (346)
                      +|||||||+++||++||++|++|+||+ |+||||||+.++|..+|+  .+|++|+|+++|++|+.++++  .++++++++
T Consensus       245 ~k~~PPlR~~~d~~~L~~~l~~g~Id~-i~SDHaP~~~~~K~~~~~~a~~G~~g~e~~~~~~~~~~v~~~~~~~~~~~~~  323 (386)
T PRK08417        245 AKLNPPLRSKEDRLALLEALKEGKIDF-LTSLHSAKSNSKKDLAFDEAAFGIDSICEYFSLCYTYLVKEGIITWSELSRF  323 (386)
T ss_pred             cEECCCCCCHHHHHHHHHHHhcCCceE-EEcCCCCCCHHHccCCHhHCCCCchHHHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence            999999999999999999999999999 999999999999976654  469999999999999876654  489999999


Q ss_pred             HchhhhhhcCCCCC------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093          293 TSFNGPDFYGLPRN------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI  346 (346)
Q Consensus       293 ~s~nPAki~gl~~k------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~  346 (346)
                      +|.||||+||++.+      +|||++||  .+|+++.       +|+|| +|++++|+|.++
T Consensus       324 ~t~~pA~~lgl~~G~l~~G~~ADlvi~d~~~~~~~~~-------~~~p~-~g~~~~g~v~~t  377 (386)
T PRK08417        324 TSYNPAQFLGLNSGEIEVGKEADLVLFDPNESTIIDD-------NFSLY-SGDELYGKIEAV  377 (386)
T ss_pred             HHHHHHHHhCCCCCccCCCCcCCEEEEcCCCCeEeCC-------CCCCc-cCCEEeccEEEE
Confidence            99999999999533      89999999  7899874       69999 799999998753

>PLN02795 allantoinase

Probab=100.00  E-value=7.1e-71  Score=553.68  Aligned_cols=331  Identities=18%  Similarity=0.207  Sum_probs=280.1

Q ss_pred             eEEecCccccceecCC-CccccccccccC-----CceeEEEeCC-CCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMP-NLKPPITTTAAAVAYRESILKALPASSNFTPLMTL   74 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mP-nt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~   74 (346)
                      ++|+||+||+|+|+++ +..++|++.+++     |||||++||| |+.|+.++.+.++.+.+.++..+.  +||+++.++
T Consensus        95 ~~v~PG~ID~H~H~~~~~~~~~e~~~~~~~aa~~gGvTtv~dmp~~~~P~~~~~~~~~~~~~~~~~~~~--vd~~~~~~~  172 (505)
T PLN02795         95 AVVMPGLIDVHVHLNEPGRTEWEGFPTGTKAAAAGGITTLVDMPLNSFPSTTSVETLELKIEAAKGKLY--VDVGFWGGL  172 (505)
T ss_pred             CEEecCEEecccCcCCCCccchhHHHHHHHHHHcCCcEEEECCCCCCCCCCChHHHHHHHHHHhccCce--eeeeceecc
Confidence            4799999999999998 777888888764     9999999999 578888888888877766544333  899888765


Q ss_pred             EeCCC--CCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC--------
Q 019093           75 YLTDT--TSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV--------  144 (346)
Q Consensus        75 ~~~~~--~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~--------  144 (346)
                        .++  .+.+++.++.+.| +++||+||+.+..+ .....++ ..++++|++++++|+++++||||.+++.        
T Consensus       173 --~~~~~~~~~~l~~~~~~G-~~g~k~f~~~~~~~-~~~~~~~-~~l~~~~~~a~~~g~~v~iH~E~~~l~~~~~~~~~~  247 (505)
T PLN02795        173 --VPENAHNASVLEELLDAG-ALGLKSFMCPSGIN-DFPMTTA-THIKAALPVLAKYGRPLLVHAEVVSPVESDSRLDAD  247 (505)
T ss_pred             --cCcchhHHHHHHHHHHCC-CcEEEEEecccCCC-CcccCCH-HHHHHHHHHHHHhCCEEEEecCChhHhhhhhhhhcC
Confidence              322  1355677777788 78999998643211 2223355 7899999999999999999999988531        


Q ss_pred             --C--------hhhhHHHHHHHHHHHHHHhCC-------CCcEEEEccCCH-HHHHHHHccC--CCeeEEEccchhhccc
Q 019093          145 --D--------IFDREKVFIDTILQPLIQRLP-------QLKVVMEHITTM-DAVKFVESCK--EGFVAATVTPQHLVLN  204 (346)
Q Consensus       145 --~--------~~~~E~~av~~~l~~~la~~~-------g~~lhi~HvSt~-~~l~~i~~ak--g~~vt~Et~ph~L~l~  204 (346)
                        +        +..+|.+++.+++  .+++.+       |+|+||+|+||+ +++++|+++|  |.+||||||||||+||
T Consensus       248 ~~~~~~~~~~rP~~aE~~ai~~~~--~la~~~~~~~~~~g~~lhi~HiSt~~~~~e~i~~ak~~G~~Vt~Ev~ph~L~l~  325 (505)
T PLN02795        248 PRSYSTYLKSRPPSWEQEAIRQLL--EVAKDTRPGGVAEGAHVHIVHLSDAESSLELIKEAKAKGDSVTVETCPHYLAFS  325 (505)
T ss_pred             CcChhHhcccCCHHHHHHHHHHHH--HHHHHhhhcccCCCCCEEEEECCChHHHHHHHHHHHHCCCcEEEEeChhhhccc
Confidence              1        2357999999999  899999       999999999999 9999999988  7899999999999999


Q ss_pred             hhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccC---CC--CCCccchhHHHHHHHHH
Q 019093          205 RNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECA---CG--CAGIYNAPVALSLYAKV  279 (346)
Q Consensus       205 ~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~---~~--~~G~~g~e~~lp~l~~~  279 (346)
                      ++++..  +++++|||||||+++||++||++|++|+||+ |+||||||+.++|..+   |+  .+|++|+|++||++|+.
T Consensus       326 ~~~~~~--~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~-i~sDHap~~~~~K~~~~~~~~~a~~G~~gle~~l~~~~~~  402 (505)
T PLN02795        326 AEEIPD--GDTRYKCAPPIRDAANRELLWKALLDGDIDM-LSSDHSPSPPDLKLLEEGNFLRAWGGISSLQFVLPATWTA  402 (505)
T ss_pred             HHHccC--CCCceEEcCCCCChHHHHHHHHHHhCCCceE-EecCCCCCChHHhccCcCCHhhCCCCceeHHHHHHHHHHH
Confidence            999864  4689999999999999999999999999999 9999999999999643   43  36999999999999976


Q ss_pred             HHhc-CCHHHHHHHHchhhhhhcCCCCC-------CccEEEEe--cceeecCCc-cccCCc-ccccCCCcEEEEEEEE
Q 019093          280 FEEM-GALDKLEAFTSFNGPDFYGLPRN-------TSKIKLTK--IPWKVPEAF-SFSFGD-IIPMFAGNTLEWQPSL  345 (346)
Q Consensus       280 ~~~~-~~l~~lv~~~s~nPAki~gl~~k-------dAdlvi~d--~~~~v~~~~-~~s~~~-~sp~~~G~~l~G~v~~  345 (346)
                      ++++ .+++++++++|.||||+|||+++       +|||+|||  ++|+|+++. ++|+++ |||| +|++++|+|++
T Consensus       403 ~~~~~l~l~~~v~~~s~~pA~~~gl~~~G~l~~G~~ADlvi~d~~~~~~v~~~~~~~s~~~~~sp~-~G~~l~g~v~~  479 (505)
T PLN02795        403 GRAYGLTLEQLARWWSERPAKLAGLDSKGAIAPGKDADIVVWDPEAEFVLDESYPIYHKHKSLSPY-LGTKLSGKVIA  479 (505)
T ss_pred             HHHcCCCHHHHHHHHHHHHHHHhCCCCCCccCCCCccCEEEEcCCcceEECcchhhhhcCCCcCCC-CCeEEEeEEEE
Confidence            6665 49999999999999999999542       89999999  899999885 789997 9999 79999999976

>PRK08044 allantoinase; Provisional

Probab=100.00  E-value=2e-70  Score=544.25  Aligned_cols=332  Identities=16%  Similarity=0.148  Sum_probs=287.4

Q ss_pred             eEEecCccccceecCC-CccccccccccC-----CceeEEEeCC-CCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMP-NLKPPITTTAAAVAYRESILKALPASSNFTPLMTL   74 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mP-nt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~   74 (346)
                      .+|+||+||+|+|++. +..++|++.+++     ||+||+++|| |+.|+.++.+.++.+.+++++.+.  |||.+++++
T Consensus        49 ~~v~Pg~iD~h~h~~~~~~~~~e~~~~~~~aa~~gGvTtv~d~~~~~~p~~~~~~~~~~~~~~~~~~s~--vd~~~~~~~  126 (449)
T PRK08044         49 LVVSPGMVDAHTHISEPGRSHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLT--IDAAQLGGL  126 (449)
T ss_pred             CEEcCCeeccccccCCCCccccccHHHHHHHHHhCCceEEECCccCCCCCCCcHHHHHHHHHHhccCCe--eeEEEEeee
Confidence            3789999999999998 766789998864     9999999999 788999999999988887765554  999998886


Q ss_pred             EeCCCCCHHHHHHHHHcCCeeEEEEeecCCccC---CCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC-------
Q 019093           75 YLTDTTSPDEIKLARKTGVVFAVKLYPAGATTN---SQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV-------  144 (346)
Q Consensus        75 ~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~---~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~-------  144 (346)
                        +.+ +..++.+|.+.| +++||+||.+....   .+....++ ..++++|++++++|.++++||||.+++.       
T Consensus       127 --~~~-~~~ei~~l~~~g-v~~fk~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~v~~H~E~~~l~~~~~~~~~  201 (449)
T PRK08044        127 --VSY-NLDRLHELDEVG-VVGFKCFVATCGDRGIDNDFRDVND-WQFYKGAQKLGELGQPVLVHCENALICDELGEEAK  201 (449)
T ss_pred             --CCC-CHHHHHHHHHcC-ceEEEEEecccCcccccCCccCcCH-HHHHHHHHHHHhcCCEEEEecCCHHHHHHHHHHHH
Confidence              543 688999998889 78999998652111   11122244 7899999999999999999999988621       


Q ss_pred             --C-----------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhc
Q 019093          145 --D-----------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALF  209 (346)
Q Consensus       145 --~-----------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~  209 (346)
                        +           +..+|.+++.+++  .+|+.+|+|+||+|+|+++++++++++|  |.++|||||||||+|+++++.
T Consensus       202 ~~G~~~~~~~~~~~P~~~E~~~v~r~~--~lA~~~g~~vhi~HiSt~~~~~~i~~ak~~G~~it~e~~~h~L~l~~~~~~  279 (449)
T PRK08044        202 REGRVTAHDYVASRPVFTEVEAIRRVL--YLAKVAGCRLHVCHISSPEGVEEVTRARQEGQDVTCESCPHYFVLDTDQFE  279 (449)
T ss_pred             hcCCCChhhccccCCHHHHHHHHHHHH--HHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCCEEEEcChhhhcccHHHhh
Confidence              1           2458999999999  8999999999999999999999999887  789999999999999999986


Q ss_pred             cCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCC--CCCccchhHHHHHHHHHHHhc--CC
Q 019093          210 QGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACG--CAGIYNAPVALSLYAKVFEEM--GA  285 (346)
Q Consensus       210 ~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~--~~G~~g~e~~lp~l~~~~~~~--~~  285 (346)
                      .  +|+.+|||||||+++||++||++|++|+||+ |+|||+||+.++|..++.  .+|++|+|+.||++++.++++  .+
T Consensus       280 ~--~~~~~k~~PPlr~~~d~~aL~~~l~~G~id~-i~sDH~P~~~~~K~~~~~~~~~g~~g~e~~l~~~~~~~v~~~~l~  356 (449)
T PRK08044        280 E--IGTLAKCSPPIRDLENQKGMWEKLFNGEIDC-LVSDHSPCPPEMKAGNIMEAWGGIAGLQNCMDVMFDEAVQKRGMS  356 (449)
T ss_pred             C--CCCcEEEcCCCCChHHHHHHHHHHhCCCceE-EEcCCCCCChHHccCChhhCCCCceEHHHHHHHHHHHHHHcCCCC
Confidence            4  4689999999999999999999999999999 999999999999976654  359999999999998765543  48


Q ss_pred             HHHHHHHHchhhhhhcCCCCC-------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093          286 LDKLEAFTSFNGPDFYGLPRN-------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI  346 (346)
Q Consensus       286 l~~lv~~~s~nPAki~gl~~k-------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~  346 (346)
                      ++++++++|.||||+||++++       +|||+|||  ++|+|+++.++|+++|||| +|++++|||+++
T Consensus       357 ~~~~v~~~s~npA~~lgl~~~G~i~~G~~ADlvi~d~~~~~~v~~~~~~s~~~~sp~-~G~~l~G~v~~t  425 (449)
T PRK08044        357 LPMFGKLMATNAADIFGLQQKGRIAPGKDADFVFIQPNSSYVLKNEDLEYRHKVSPY-VGRTIGARITKT  425 (449)
T ss_pred             HHHHHHHHHHhHHHHhCCCCCCcCCCCCccCEEEECCCCcEEECHHHccccCCCCCC-CCCEEeeeEEEE
Confidence            999999999999999999532       89999999  8999999999999999999 799999999863

>PRK00369 pyrC dihydroorotase; Provisional

Probab=100.00  E-value=2.9e-70  Score=532.49  Aligned_cols=300  Identities=17%  Similarity=0.213  Sum_probs=248.8

Q ss_pred             eEEecCccccceecCC-CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLY   75 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~   75 (346)
                      ++||||+||+|||+|+ |.+++|||+|+|     ||||||++||||.|++++.+.++.+++++++.+.  |||++|+++ 
T Consensus        43 ~~vlPG~ID~HvH~r~pg~~~~ed~~sgs~AAa~GGvTtv~~mPnt~P~~~~~~~l~~~~~~a~~~~~--vd~~~~~~~-  119 (392)
T PRK00369         43 TLILPGAIDLHVHLRGLKLSYKEDVASGTSEAAYGGVTLVADMPNTIPPLNTPEAITEKLAELEYYSR--VDYFVYSGV-  119 (392)
T ss_pred             CEEeCCEEEcccccCCCCCcccccHHHHHHHHHhCCcEEEEECCCCCCCCChHHHHHHHHHHhCcCCe--EEEEEEeec-
Confidence            5899999999999999 999999999976     9999999999999999999999999888776554  999999865 


Q ss_pred             eCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCC------hhhh
Q 019093           76 LTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVD------IFDR  149 (346)
Q Consensus        76 ~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~------~~~~  149 (346)
                       ++  +.+||.++   | +.|||+|+.      +  ..+. .    +|+.+.+.+.++++||||++++..      ...+
T Consensus       120 -~~--~~~el~~~---~-~~g~k~f~~------~--~~~~-~----~~~~~~~~~~~v~~HaE~~~l~~~~~~~~rp~~a  179 (392)
T PRK00369        120 -TK--DPEKVDKL---P-IAGYKIFPE------D--LERE-E----TFRVLLKSRKLKILHPEVPLALKSNRKLRRNCWY  179 (392)
T ss_pred             -cC--CHHHHHHh---h-CceEEEECC------C--CchH-H----HHHHHHHhCCEEEEeCCCHHHhhcchhcccCHHH
Confidence             43  34456554   6 789999952      1  1232 3    333444455899999999886431      2357


Q ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhH
Q 019093          150 EKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHR  229 (346)
Q Consensus       150 E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~  229 (346)
                      |.+++.++.  .+     +|+||+|+||+++++.+++ +|  ||||||||||+||+++      ++.+|||||||+++||
T Consensus       180 E~~ai~~~~--~~-----~~lhi~HvSt~~~v~~ak~-~g--vt~Ev~pHhL~l~~~~------~~~~k~~PPLR~~~dr  243 (392)
T PRK00369        180 EIAALYYVK--DY-----QNVHITHASNPRTVRLAKE-LG--FTVDITPHHLLVNGEK------DCLTKVNPPIRDINER  243 (392)
T ss_pred             HHHHHHHHH--Hh-----CCEEEEECCCHHHHHHHHH-CC--CeEEechhHheeccCC------CCceEEeCCCCCHHHH
Confidence            888876666  34     8999999999999886643 33  8999999999999862      3689999999999999


Q ss_pred             HHHHHHHHcCCccEEeecCCCCCCccccccCCC--CCCccchhHHHHHHHHHHHh-cCCHHHHHHHHchhhhhhcCCCCC
Q 019093          230 QAVVSAVTSGSRKFFLGTDSAPHERGRKECACG--CAGIYNAPVALSLYAKVFEE-MGALDKLEAFTSFNGPDFYGLPRN  306 (346)
Q Consensus       230 ~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~--~~G~~g~e~~lp~l~~~~~~-~~~l~~lv~~~s~nPAki~gl~~k  306 (346)
                      ++||++|++  ||+ |+||||||+.++|..+|.  .+|++|+|+++|++|+...+ ..+++++++++|.|||++|||+.+
T Consensus       244 ~aL~~~l~~--id~-i~SDHaP~~~~~K~~~f~~~~~Gi~GlE~~lpll~~~v~~~~lsl~~~v~~~s~nPA~ilgl~~g  320 (392)
T PRK00369        244 LWLLQALSE--VDA-IASDHAPHSSFEKLQPYEVCPPGIAALSFTPPFIYTLVSKGILSIDRAVELISTNPARILGIPYG  320 (392)
T ss_pred             HHHHHHHHh--CCE-EEeCCCCCCHHHccCCHhhCCCCCeeHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCCCCC
Confidence            999999999  999 999999999999976665  36999999999999975444 358999999999999999999532


Q ss_pred             ------CccEEEEe-cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093          307 ------TSKIKLTK-IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI  346 (346)
Q Consensus       307 ------dAdlvi~d-~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~  346 (346)
                            +|||+||| .+|++  +.++|+++|||| +|++++|+|.++
T Consensus       321 ~i~~G~~ADlvi~d~~~~~~--~~~~sk~~~sp~-~G~~l~G~v~~t  364 (392)
T PRK00369        321 EIKEGYRANFTVIQFEDWRY--STKYSKVIETPL-DGFELKASVYAT  364 (392)
T ss_pred             ccCCCCccCEEEEeCCceeE--ccccccCCCCCC-CCCEeeeEEEEE
Confidence                  89999999 88987  557999999999 799999999863

>PRK04250 dihydroorotase; Provisional

Probab=100.00  E-value=1.6e-68  Score=522.41  Aligned_cols=314  Identities=21%  Similarity=0.239  Sum_probs=262.4

Q ss_pred             eEEecCccccceecCC-CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLY   75 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~   75 (346)
                      ++|+||+||+|||+++ +..++|++.+++     ||+||+++|||+.|++++.+.++.+.+++++.+.  |||++++ + 
T Consensus        43 ~~v~PG~ID~HvH~~~~~~~~~e~~~~~~~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~~~~~~~--vd~~~~~-~-  118 (398)
T PRK04250         43 GIILPGLIDVHVHLRDFEESYKETIESGTKAALHGGITLVFDMPNTKPPIMDEKTYEKRMRIAEKKSY--ADYALNF-L-  118 (398)
T ss_pred             CEEccCEEeccccccCCCCCcHHHHHHHHHHHHhCCeEEEEECCCCCCCCCcHHHHHHHHHHhCcCce--eeEEEEE-e-
Confidence            4799999999999998 777889998764     9999999999999999999999988887766554  9999987 5 


Q ss_pred             eCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCC----hhhhHH
Q 019093           76 LTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVD----IFDREK  151 (346)
Q Consensus        76 ~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~----~~~~E~  151 (346)
                       +++ +.+++.++..    .++|+||.+  +  +..+..  ..+...   .++.+.++++||||.++...    +..+|.
T Consensus       119 -~~~-~~~~l~~l~~----~~~k~f~~~--~--~~~~~~--~~~~~~---~~~~~~~v~~H~E~~~~~~~~~~~p~~aE~  183 (398)
T PRK04250        119 -IAG-NCEKAEEIKA----DFYKIFMGA--S--TGGIFS--ENFEVD---YACAPGIVSVHAEDPELIREFPERPPEAEV  183 (398)
T ss_pred             -cCC-CHHHHHHHHh----hheEEEEec--C--CCchhH--HHHHHH---HHhcCCeEEEEecChhhhhcccCCCHHHHH
Confidence             443 5667887752    258999853  1  111111  112111   33446789999999887432    356899


Q ss_pred             HHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccCCCe-eEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHH
Q 019093          152 VFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKEGF-VAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQ  230 (346)
Q Consensus       152 ~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~akg~~-vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~  230 (346)
                      +++.|++  .||+.+|+|+||+|+||++++++|+++ |.+ ||||||||||+||++++ .  +++.+|||||||+++||+
T Consensus       184 ~av~r~~--~la~~~~~~lhi~HvSt~~~~~~i~~~-g~~~vt~Ev~ph~L~l~~~~~-~--~~~~~k~~PPLR~~~d~~  257 (398)
T PRK04250        184 VAIERAL--EAGKKLKKPLHICHISTKDGLKLILKS-NLPWVSFEVTPHHLFLTRKDY-E--RNPLLKVYPPLRSEEDRK  257 (398)
T ss_pred             HHHHHHH--HHHHHhCCCEEEEeCCCHHHHHHHHHc-CCCcEEEEeCHHHhccCHHHH-C--CCCceEEcCCCCCHHHHH
Confidence            9999999  899999999999999999999999864 776 99999999999999998 3  468999999999999999


Q ss_pred             HHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHh-cCCHHHHHHHHchhhhhhcCCCCC---
Q 019093          231 AVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEE-MGALDKLEAFTSFNGPDFYGLPRN---  306 (346)
Q Consensus       231 aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~-~~~l~~lv~~~s~nPAki~gl~~k---  306 (346)
                      +||++|.  .||+ |+||||||+.++|+.  +.+|++|+|++||++|+...+ .++++++++++|.||||+|||+.+   
T Consensus       258 aL~~~l~--~Id~-i~sDHaP~~~~~k~~--~~~G~~g~e~~lpl~~~~v~~~~lsl~~~v~~~t~npAk~lgl~~~GL~  332 (398)
T PRK04250        258 ALWENFS--KIPI-IASDHAPHTLEDKEA--GAAGIPGLETEVPLLLDAANKGMISLFDIVEKMHDNPARIFGIKNYGIE  332 (398)
T ss_pred             HHHHhhc--cCCE-EEcCCcccCHHHhhc--CCCCcchHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhCCCCcCcc
Confidence            9999995  5999 999999999999863  357999999999999975444 359999999999999999999632   


Q ss_pred             ---CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093          307 ---TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI  346 (346)
Q Consensus       307 ---dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~  346 (346)
                         +|||+|||  ++|+++.++++|+++|||| +|++++|+|.++
T Consensus       333 ~G~~ADlvi~D~~~~~~v~~~~~~s~~~~sp~-~g~~l~g~v~~t  376 (398)
T PRK04250        333 EGNYANFAVFDMKKEWTIKAEELYTKAGWTPY-EGFKLKGKVIMT  376 (398)
T ss_pred             CCCcCCEEEEcCCCcEEEChhhccccCCCCCC-CCCEEeeEEEEE
Confidence               89999999  8899999999999999999 799999998753

>PRK06189 allantoinase; Provisional

Probab=100.00  E-value=8.7e-68  Score=526.20  Aligned_cols=331  Identities=17%  Similarity=0.174  Sum_probs=283.8

Q ss_pred             eEEecCccccceecCC-CccccccccccC-----CceeEEEeCC-CCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMP-NLKPPITTTAAAVAYRESILKALPASSNFTPLMTL   74 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mP-nt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~   74 (346)
                      ++|+||+||+|+|+++ +..++|++.+++     ||+||+++|| |+.|+.++.+.+..+.+.++..+.  +||.+++++
T Consensus        50 ~~vlPG~ID~H~H~~~~~~~~~~~~~~~~~aa~~gGvTt~~~~p~~t~p~~~~~~~~~~~~~~~~~~~~--~d~~~~~~~  127 (451)
T PRK06189         50 LYVFPGMIDVHVHFNEPGRTHWEGFATGSAALAAGGCTTYFDMPLNSIPPTVTREALDAKAELARQKSA--VDFALWGGL  127 (451)
T ss_pred             CEEecCEEEeeeccCCCCCCCcccHHHHHHHHHhCCEEEEEECCCCCCCCCCcHHHHHHHHHHhCcCce--EeEEEEecc
Confidence            4799999999999998 677889998754     9999999999 778999998888888776665444  899998665


Q ss_pred             EeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC---------C
Q 019093           75 YLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV---------D  145 (346)
Q Consensus        75 ~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~---------~  145 (346)
                        +++ +.++|.+|.+.| +++||+||.+. +..+....++ ..++++|++++++|.++++||||++++.         +
T Consensus       128 --~~~-~~~~l~~l~~~G-v~~~k~f~~~~-~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~H~e~~~~~~~~~~~~~~~g  201 (451)
T PRK06189        128 --VPG-NLEHLRELAEAG-VIGFKAFMSNS-GTDEFRSSDD-LTLYEGMKEIAALGKILALHAESDALTRHLTTQARQQG  201 (451)
T ss_pred             --ccc-CHHHHHHHHHcC-CcEEEEEcccc-CCCCcCcCCH-HHHHHHHHHHHhcCCeEEEECCChHHHHHHHHHHHhcC
Confidence              443 578999998889 78999998541 1112334455 7899999999999999999999987531         1


Q ss_pred             -----------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccCC
Q 019093          146 -----------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQGG  212 (346)
Q Consensus       146 -----------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~~  212 (346)
                                 +..+|..++.+++  .+|+++|+|+||+|+||++++++|+++|  |.+||||||||||+|+++++..  
T Consensus       202 ~~~~~~~~~~~P~~~E~~~v~~~l--~la~~~g~~~hi~HiSt~~~~~~i~~~k~~g~~vt~ev~ph~L~l~~~~~~~--  277 (451)
T PRK06189        202 KTDVRDYLESRPVVAELEAVQRAL--LYAQETGCPLHFVHISSGKAVALIAEAKKRGVDVSVETCPHYLLFTEEDFER--  277 (451)
T ss_pred             CCChhHccccCCHHHHHHHHHHHH--HHHHHhCCCEEEEECCCHHHHHHHHHHHHCCCcEEEEeCHHHhhcCHhHhhC--
Confidence                       1357999999999  8999999999999999999999999887  7899999999999999999864  


Q ss_pred             CCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccc-cCCC--CCCccchhHHHHHHHHHHH-h-cCCHH
Q 019093          213 LRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKE-CACG--CAGIYNAPVALSLYAKVFE-E-MGALD  287 (346)
Q Consensus       213 ~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~-~~~~--~~G~~g~e~~lp~l~~~~~-~-~~~l~  287 (346)
                      +++.+||+||||++++|++||++|++|.||+ |+|||+||+.++|. .++.  ++|++|+|+.+|++++..+ + ..+++
T Consensus       278 ~~~~~~~~Pplr~~~~~~~L~~~l~~G~i~~-i~sDh~p~~~~~K~~~~~~~~~~G~~g~e~~l~~~~~~~~~~~~l~~~  356 (451)
T PRK06189        278 IGAVAKCAPPLRSRSQKEELWRGLLAGEIDM-ISSDHSPCPPELKEGDDFFLVWGGISGGQSTLLVMLTEGYIERGIPLE  356 (451)
T ss_pred             cCCceEEeCCCCChhhHHHHHHHHhCCCceE-EECCCCCCCHHHcCcCCcccCCCCceeHHHHHHHHHHHHHhcCCCCHH
Confidence            4689999999999999999999999999999 99999999998886 3443  3599999999999987543 3 34899


Q ss_pred             HHHHHHchhhhhhcCCCCC-------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093          288 KLEAFTSFNGPDFYGLPRN-------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI  346 (346)
Q Consensus       288 ~lv~~~s~nPAki~gl~~k-------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~  346 (346)
                      ++++++|.||||+|||+++       +|||+|||  ++|++++++++|+++|||| +|++++|+|.++
T Consensus       357 ~~~~~~t~npA~~lgl~~~G~l~~G~~ADlvi~d~~~~~~~~~~~~~~~~~~~p~-~g~~~~g~v~~t  423 (451)
T PRK06189        357 TIARLLATNPAKRFGLPQKGRLEVGADADFVLVDLDETYTLTKEDLFYRHKQSPY-EGRTFPGRVVAT  423 (451)
T ss_pred             HHHHHHhhhHHHHhCCCCCCcccCCCcCCEEEEcCCCCEEECHHHhhhcCCCCCc-CCcEEEeEEEEE
Confidence            9999999999999999632       89999999  7999999999999999999 799999999764

>cd01317 DHOase_IIa Dihydroorotase (DHOase), subgroup IIa; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis

Probab=100.00  E-value=6.9e-67  Score=508.25  Aligned_cols=327  Identities=22%  Similarity=0.271  Sum_probs=283.9

Q ss_pred             eEEecCccccceecCC-CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLY   75 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~   75 (346)
                      ++||||+||+|||+|+ +..++||+.+++     ||||||++|||+.|+.++.+.++.+++++++.+.  +||.+++++.
T Consensus        10 ~~vlPG~iD~HvH~~~~~~~~~e~~~s~s~aA~~GGvTtii~~p~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~   87 (374)
T cd01317          10 KILAPGLVDLHVHLREPGFEYKETLESGAKAAAAGGFTTVVCMPNTNPVIDNPAVVELLKNRAKDVGI--VRVLPIGALT   87 (374)
T ss_pred             CEEecCEEeeccccCCCCccccchHHHHHHHHHhCCCcEEEECCCCCCCCCCHHHHHHHHHHhccCCc--eeEEEEEEEe
Confidence            5899999999999999 778899998875     9999999999999999999999888887765443  7888888873


Q ss_pred             eC-CCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC------C---
Q 019093           76 LT-DTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV------D---  145 (346)
Q Consensus        76 ~~-~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~------~---  145 (346)
                      .. ++.+.++|.+|.+.| +++||.|.        ....++ ..++++|++++++|+++++||||.+++.      +   
T Consensus        88 ~~~~~~~~~~i~~l~~~G-~~~~k~~~--------~~~~~~-~~l~~~~~~~~~~g~~v~~H~E~~~~~~~~~~~~g~~~  157 (374)
T cd01317          88 KGLKGEELTEIGELLEAG-AVGFSDDG--------KPIQDA-ELLRRALEYAAMLDLPIIVHPEDPSLAGGGVMNEGKVA  157 (374)
T ss_pred             eCCCcccHHHHHHHHHCC-cEEEEcCC--------cCCCCH-HHHHHHHHHHHhcCCeEEEecCChhhhhccCccCChhh
Confidence            21 111367899998889 78999652        122355 7899999999999999999999988642      1   


Q ss_pred             --------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccCCCCC
Q 019093          146 --------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQGGLRP  215 (346)
Q Consensus       146 --------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~~~~~  215 (346)
                              ...+|..++.+++  .+|+.+|+|+||+|+|+++++++++++|  |..+++|+|||||+||++++..  +++
T Consensus       158 ~~~~~~~~p~~~e~~~v~~~~--~la~~~~~~i~i~h~ss~~~l~~i~~~~~~G~~~~~e~~~h~L~ld~~~~~~--~~~  233 (374)
T cd01317         158 SRLGLPGIPPEAETIMVARDL--ELAEATGARVHFQHLSTARSLELIRKAKAKGLPVTAEVTPHHLLLDDEALES--YDT  233 (374)
T ss_pred             HHhCCCCCCHHHHHHHHHHHH--HHHHHhCCcEEEEeCCCHHHHHHHHHHHHCCCCEEEEecHHHHhcCHHHHhc--cCC
Confidence                    1357888999999  8999999999999999999999999987  8889999999999999999864  468


Q ss_pred             ceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCC--CCCccchhHHHHHHHHHHHhc--CCHHHHHH
Q 019093          216 HNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACG--CAGIYNAPVALSLYAKVFEEM--GALDKLEA  291 (346)
Q Consensus       216 ~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~--~~G~~g~e~~lp~l~~~~~~~--~~l~~lv~  291 (346)
                      ++||+||||+++++++||+++++|.||+ |||||+||+.++|..+|+  .+|++|+|+.||++++.+++.  .+++++++
T Consensus       234 ~~k~~Pplr~~~~~~~l~~~~~~G~i~~-igsDh~p~~~~~k~~~~~~~~~Gi~g~e~~l~~~~~~~~~~~~~~~~~~~~  312 (374)
T cd01317         234 NAKVNPPLRSEEDREALIEALKDGTIDA-IASDHAPHTDEEKDLPFAEAPPGIIGLETALPLLWTLLVKGGLLTLPDLIR  312 (374)
T ss_pred             ceEEcCCCCCHHHHHHHHHHHhcCCceE-EEcCCCCCCHHHccCCHhhCCCcHhHHHHHHHHHHHHHHHcCCCCHHHHHH
Confidence            9999999999999999999999999999 999999999888876554  469999999999998766553  38999999


Q ss_pred             HHchhhhhhcCCCCC------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093          292 FTSFNGPDFYGLPRN------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI  346 (346)
Q Consensus       292 ~~s~nPAki~gl~~k------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~  346 (346)
                      ++|.||||+||++.+      +|||+|||  .+|+++++.++|+++|||| +|++++|+|+++
T Consensus       313 ~~t~npA~~lgl~~G~l~~G~~ADlvi~d~~~~~~~~~~~~~s~~~~sp~-~G~~l~g~~~~t  374 (374)
T cd01317         313 ALSTNPAKILGLPPGRLEVGAPADLVLFDPDAEWIVDEETFRSKSKNTPF-DGQKLKGRVLAT  374 (374)
T ss_pred             HHHHHHHHHhCCCCCcccCCCcCCEEEECCCCCEEEChhhccccCCCCCC-CCCEEeEEEEEC
Confidence            999999999999532      89999999  9999999999999999999 799999999874

This subgroup also contains proteins that lack the active site, like unc-33, a C.elegans protein involved in axon growth.

>PRK13404 dihydropyrimidinase; Provisional

Probab=100.00  E-value=3.4e-67  Score=524.46  Aligned_cols=332  Identities=17%  Similarity=0.201  Sum_probs=279.4

Q ss_pred             eEEecCccccceecCC----CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD----GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLM   72 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~----g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~   72 (346)
                      ++|+||+||+|+|+++    +..++|++.+++     |||||+++||++.|+.++.+.++.+++..+..+.  +||++|+
T Consensus        50 ~~v~PG~ID~H~H~~~~~~~~~~~~e~~~~~s~aa~~gGvTtv~~~~~~~~~~~~~~~l~~~~~~~~~~~~--vd~~~~~  127 (477)
T PRK13404         50 RLVLPGGVDSHCHIDQPSGDGIMMADDFYTGTVSAAFGGTTTVIPFAAQHRGQSLREAVEDYHRRAAGKAV--IDYAFHL  127 (477)
T ss_pred             CEEecCEEEeEEcCCccccCCccccchHHHHHHHHHcCCccEEEEccCCCCCCCHHHHHHHHHHHhccCcE--EEEEEEE
Confidence            4799999999999986    355688888764     9999999999988888888888887776554443  8999987


Q ss_pred             EEEeCCCCCH-HHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC-------
Q 019093           73 TLYLTDTTSP-DEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV-------  144 (346)
Q Consensus        73 ~~~~~~~~~~-~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~-------  144 (346)
                      ++..+..... +++.++.+.| +.+||+|+.+    +...+ ++ ..+++++++++++|.++++||||.+++.       
T Consensus       128 ~~~~~~~~~~~~~v~~l~~~G-~~~iKi~~~~----~~~~~-~~-~~l~~~~~~a~~~g~~V~~Hae~~~~i~~~~~~~~  200 (477)
T PRK13404        128 IVADPTEEVLTEELPALIAQG-YTSFKVFMTY----DDLKL-DD-RQILDVLAVARRHGAMVMVHAENHDMIAWLTKRLL  200 (477)
T ss_pred             EecCCChhhHHHHHHHHHHcC-CCEEEEEecC----CCCCC-CH-HHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHH
Confidence            7621111123 5788888888 7899999842    12234 34 7899999999999999999999987631       


Q ss_pred             --C-----------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhc
Q 019093          145 --D-----------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALF  209 (346)
Q Consensus       145 --~-----------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~  209 (346)
                        +           ...+|..++.+++  .+|+.+|+|+||+|+||++++++|+++|  |.+||||||||||+||++++.
T Consensus       201 ~~G~~~~~~~~~~rp~~~E~~~v~~~~--~la~~~g~~~hi~Hvs~~~~~~~i~~~k~~g~~vt~e~~ph~L~l~~~~~~  278 (477)
T PRK13404        201 AAGLTAPKYHAISRPMLAEREATHRAI--ALAELVDVPILIVHVSGREAAEQIRRARGRGLKIFAETCPQYLFLTAEDLD  278 (477)
T ss_pred             HCCCcchhhccccCCHHHHHHHHHHHH--HHHHHhCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEChhhhccCHHHhc
Confidence              1           1358999999999  8999999999999999999999999988  789999999999999999986


Q ss_pred             cCC-CCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCcccc--------ccCCC--CCCccchhHHHHHHHH
Q 019093          210 QGG-LRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRK--------ECACG--CAGIYNAPVALSLYAK  278 (346)
Q Consensus       210 ~~~-~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K--------~~~~~--~~G~~g~e~~lp~l~~  278 (346)
                      ..+ +|+.+|||||||+++||++||++|.+|.||+ |+|||+||+.++|        ..+|+  .+|++|+|+.+|++++
T Consensus       279 ~~~~~g~~~k~~Pplr~~~d~~aL~~~l~~G~id~-i~sDHap~~~~eK~~~~~~~~~~~~~~~~~G~~gie~~l~~ll~  357 (477)
T PRK13404        279 RPGMEGAKYICSPPPRDKANQEAIWNGLADGTFEV-FSSDHAPFRFDDTDGKLAAGANPSFKAIANGIPGIETRLPLLFS  357 (477)
T ss_pred             CccccCCceEECCCCCChHHHHHHHHHHhCCCceE-EecCCCCCCcccchhhhhccCCCCHhhCCCCcccHHHHHHHHHH
Confidence            421 4689999999999999999999999999999 9999999998887        22344  3599999999999997


Q ss_pred             HHHh--cCCHHHHHHHHchhhhhhcCC-CCC-------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093          279 VFEE--MGALDKLEAFTSFNGPDFYGL-PRN-------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI  346 (346)
Q Consensus       279 ~~~~--~~~l~~lv~~~s~nPAki~gl-~~k-------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~  346 (346)
                      .+++  ..+++++++++|.||||+||| +++       +|||+|||  .+|+|+++.++++++|||| +|++++|+|.++
T Consensus       358 ~~v~~~~ls~~~~~~~~t~~pA~~lgl~~~~G~i~~G~~ADlvivd~~~~~~v~~~~~~~~~~~sp~-~g~~~~g~v~~t  436 (477)
T PRK13404        358 EGVVKGRISLNRFVALTSTNPAKLYGLYPRKGAIAIGADADIAIWDPDREVTITNADLHHAADYTPY-EGMRVTGWPVTV  436 (477)
T ss_pred             HHHHcCCCCHHHHHHHHHHHHHHHhCCCCCCceecCCCcCCEEEEcCCccEEEchHHhcccCCCCcc-cceEEeeeEEEE
Confidence            5543  358999999999999999999 542       89999999  8999999999999999999 799999999763

>PRK07575 dihydroorotase; Provisional

Probab=100.00  E-value=5.7e-67  Score=518.32  Aligned_cols=324  Identities=21%  Similarity=0.203  Sum_probs=274.4

Q ss_pred             eEEecCccccceecCC-CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLY   75 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~   75 (346)
                      ++|+||+||+|+|+++ +..++|++.+++     ||+||+++|||+.|++++.+.+..+.+++++.+.  +||++++++ 
T Consensus        52 ~~v~PG~ID~H~H~~~~~~~~~e~~~~~~~aa~~gGvTt~~dmp~~~p~~~~~~~~~~~~~~a~~~~~--v~~~~~~~~-  128 (438)
T PRK07575         52 LTLLPGVIDPQVHFREPGLEHKEDLFTASRACAKGGVTSFLEMPNTKPLTTTQAALDDKLARAAEKCV--VNYGFFIGA-  128 (438)
T ss_pred             CEEcccEEEeeeccCCCCCcCcchHHHHHHHHHhCCEEEEEECCCCCCCCCcHHHHHHHHHHhccCcE--EEEEEEccc-
Confidence            4799999999999998 778899998865     9999999999999999999988888777665444  899999776 


Q ss_pred             eCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC-----------
Q 019093           76 LTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV-----------  144 (346)
Q Consensus        76 ~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~-----------  144 (346)
                       +++ +.+++.++.  | +.|||+|+.+  ...+..+.+. ..+++++   ++.|.++++||||.+++.           
T Consensus       129 -~~~-~l~~l~~~~--~-~~g~~~f~~~--~~~~~~~~~~-~~~~~~~---~~~~~~v~~h~e~~~l~~~~~~~~~g~~~  197 (438)
T PRK07575        129 -TPD-NLPELLTAN--P-TCGIKIFMGS--SHGPLLVDEE-AALERIF---AEGTRLIAVHAEDQARIRARRAEFAGISD  197 (438)
T ss_pred             -ccc-CHHHHHHhh--C-CeEEEEEEee--CCCCcccCcH-HHHHHHH---HhCCCEEEEeCcChHHHHhhhHhhccCcC
Confidence             443 566665442  5 6899999842  1112234443 4455544   356999999999987521           


Q ss_pred             -------ChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCce
Q 019093          145 -------DIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHN  217 (346)
Q Consensus       145 -------~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~  217 (346)
                             .+..+|.+++.+++  .+|+.+|+|+||+|+||++++++|+++|+.+||||||||||+||++++.+  +++.+
T Consensus       198 ~~~~~~~~p~~aE~~av~~~~--~la~~~g~~lhi~HiSt~~~v~~i~~~k~~~vt~ev~phhL~l~~~~~~~--~~~~~  273 (438)
T PRK07575        198 PADHSQIQDEEAALLATRLAL--KLSKKYQRRLHILHLSTAIEAELLRQDKPSWVTAEVTPQHLLLNTDAYER--IGTLA  273 (438)
T ss_pred             cccccccCcHHHHHHHHHHHH--HHHHHHCCCEEEEECCCHHHHHHHHHhcCCCEEEEEchhhheeCHHHHhC--CCceE
Confidence                   12358999999999  89999999999999999999999999987789999999999999999864  46899


Q ss_pred             EEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCC--CCccchhHHHHHHHHHHHh-cCCHHHHHHHHc
Q 019093          218 YCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGC--AGIYNAPVALSLYAKVFEE-MGALDKLEAFTS  294 (346)
Q Consensus       218 k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~--~G~~g~e~~lp~l~~~~~~-~~~l~~lv~~~s  294 (346)
                      |||||||+++||++||++|++|+||+ |+|||+||+.++|..+|+.  +|++|+|+.+|++|+.+.+ +.+++++++++|
T Consensus       274 k~~PPLR~~~d~~~L~~~l~~G~id~-i~sDh~p~~~~~k~~~~~~~~~G~~g~e~~l~~l~~~~~~~~lsl~~~~~~~s  352 (438)
T PRK07575        274 QMNPPLRSPEDNEALWQALRDGVIDF-IATDHAPHTLEEKAQPYPNSPSGMPGVETSLPLMLTAAMRGKCTVAQVVRWMS  352 (438)
T ss_pred             EEeCCCCCHHHHHHHHHHHhCCCCCE-EecCCCCCCHHHccCCcccCCCCcccHHHHHHHHHHHHhcCCCCHHHHHHHHh
Confidence            99999999999999999999999999 9999999999999877653  5999999999999876554 358999999999


Q ss_pred             hhhhhhcCCCCC-------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEE
Q 019093          295 FNGPDFYGLPRN-------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL  345 (346)
Q Consensus       295 ~nPAki~gl~~k-------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~  345 (346)
                      .||||+||++++       +|||+|||  .+|+++.+.++|+++|||| +|++++|+|.+
T Consensus       353 ~npAk~lgl~~~G~L~~G~~ADlvi~D~~~~~~v~~~~~~s~~~~sp~-~g~~~~G~v~~  411 (438)
T PRK07575        353 TAVARAYGIPNKGRIAPGYDADLVLVDLNTYRPVRREELLTKCGWSPF-EGWNLTGWPVT  411 (438)
T ss_pred             hhHHHHcCCCCCCccCCCCcCCEEEEcCCCCEEEchHHccccCCCCCC-CCCEEeeEEEE
Confidence            999999999532       89999999  8899999999999999999 79999999975

>PRK09060 dihydroorotase; Validated

Probab=100.00  E-value=1.6e-66  Score=515.77  Aligned_cols=326  Identities=17%  Similarity=0.209  Sum_probs=274.3

Q ss_pred             eEEecCccccceecCC-CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLY   75 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~   75 (346)
                      ++|+||+||+|+|+++ +..++|++.+++     ||+||+++|||+.|+.++.+.+..+.+++++.+.  +||+++++. 
T Consensus        52 ~~v~PG~ID~HvH~~~~~~~~~e~~~t~~~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~a~~~~~--~d~~~~~~~-  128 (444)
T PRK09060         52 LHVLPGVIDSQVHFREPGLEHKEDLETGSRAAVLGGVTAVFEMPNTNPLTTTAEALADKLARARHRMH--CDFAFYVGG-  128 (444)
T ss_pred             CEEccCEEeccccccCCCCCccchHHHHHHHHHhCCcEEEEECCCCCCCCChHHHHHHHHHHhcccce--eeEEEEecc-
Confidence            4799999999999998 778889998864     9999999999999999999988888777665444  899998765 


Q ss_pred             eCCCCCHHHHHHHHH-cCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC----------
Q 019093           76 LTDTTSPDEIKLARK-TGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV----------  144 (346)
Q Consensus        76 ~~~~~~~~el~~l~~-~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~----------  144 (346)
                       .. .+.+++.++.. .| +.|||+||.+  +.....+.|. ..+.++++++   |.++++||||.+++.          
T Consensus       129 -~~-~~~~~l~el~~~~g-v~g~k~fm~~--~~~~~~~~d~-~~l~~~~~~~---~~~v~~H~E~~~l~~~~~~~~~~g~  199 (444)
T PRK09060        129 -TR-DNADELAELERLPG-CAGIKVFMGS--STGDLLVEDD-EGLRRILRNG---RRRAAFHSEDEYRLRERKGLRVEGD  199 (444)
T ss_pred             -CC-CCHHHHHHHHhhcC-ceEEEEEecc--CCCCcccCCH-HHHHHHHHhC---CCeEEEECCCHHHHHHHHHHHhcCC
Confidence             33 24456666643 46 7899999853  1122234565 6677776554   889999999987521          


Q ss_pred             -------ChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccCCCeeEEEccchhhccchhh-hccCCCCCc
Q 019093          145 -------DIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNA-LFQGGLRPH  216 (346)
Q Consensus       145 -------~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~akg~~vt~Et~ph~L~l~~~~-~~~~~~~~~  216 (346)
                             .+..+|..++++++  .+|+.+|+|+||+|+||++++++|+++|. .||||||||||+|++++ +..  ++++
T Consensus       200 ~~~~~~~~p~~aE~~av~~~~--~la~~~~~~lhi~h~st~~~v~~i~~~~~-~vt~ev~ph~l~l~~~~~~~~--~~~~  274 (444)
T PRK09060        200 PSSHPVWRDEEAALLATRRLV--RLARETGRRIHVLHVSTAEEIDFLADHKD-VATVEVTPHHLTLAAPECYER--LGTL  274 (444)
T ss_pred             cccccccCCHHHHHHHHHHHH--HHHHHHCCCEEEEeCCCHHHHHHHHHhCC-CeEEEeChHHhccCchhhccc--CCce
Confidence                   12358889999999  89999999999999999999999999884 59999999999999998 543  5689


Q ss_pred             eEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCC--CCCccchhHHHHHHHHHHHh-cCCHHHHHHHH
Q 019093          217 NYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACG--CAGIYNAPVALSLYAKVFEE-MGALDKLEAFT  293 (346)
Q Consensus       217 ~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~--~~G~~g~e~~lp~l~~~~~~-~~~l~~lv~~~  293 (346)
                      +|||||||+++||++||+++++|+||+ |+|||+||+.++|..+|.  .+|++|+|+++|++++.+.+ +.+++++++++
T Consensus       275 ~k~~PPlr~~~~~~~l~~al~~G~id~-i~sDh~p~~~~~k~~~~~~~~~G~~g~e~~~~l~~~~v~~g~l~~~~~~~~~  353 (444)
T PRK09060        275 AQMNPPIRDARHRDGLWRGVRQGVVDV-LGSDHAPHTLEEKAKPYPASPSGMTGVQTLVPIMLDHVNAGRLSLERFVDLT  353 (444)
T ss_pred             EEEeCCCCCHHHHHHHHHHHhCCCccE-EecCCCCCCHHHhcCCcccCCCCcccHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence            999999999999999999999999999 999999999999976654  35999999999999976433 35899999999


Q ss_pred             chhhhhhcCCCCC-------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093          294 SFNGPDFYGLPRN-------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI  346 (346)
Q Consensus       294 s~nPAki~gl~~k-------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~  346 (346)
                      |.||||+|||+++       +|||||||  ++|+|+.+.++|+++|||| +|++++|+|.++
T Consensus       354 s~~pa~~~gl~~~G~l~~G~~ADlvl~d~~~~~~v~~~~~~s~~~~sp~-~g~~l~g~~~~t  414 (444)
T PRK09060        354 SAGPARIFGIAGKGRIAVGYDADFTIVDLKRRETITNEWIASRCGWTPY-DGKEVTGWPVGT  414 (444)
T ss_pred             hHhHHHHhCCCCCCcccCCCcCCEEEEcCCCCEEEChHHhcccCCCCCC-CCCEEeeeEEEE
Confidence            9999999999543       89999999  8999999999999999999 799999999753

>TIGR00857 pyrC_multi dihydroorotase, multifunctional complex type

Probab=100.00  E-value=6.4e-66  Score=507.17  Aligned_cols=329  Identities=23%  Similarity=0.314  Sum_probs=280.4

Q ss_pred             eEEecCccccceecCC-CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLY   75 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~   75 (346)
                      ++|+||+||+|+|+++ +...++++.+++     |||||+++||++.|+.++.+.++.+++++++.+.  |||.+++++.
T Consensus        35 ~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~t~p~~~~~~~l~~~~~~~~~~~~--vd~~~~~~~~  112 (411)
T TIGR00857        35 LLVLPGFIDLHVHLRDPGEEYKEDIESGSKAAAHGGFTTVADMPNTKPPIDTPETLEWKLQRLKKVSL--VDVHLYGGVT  112 (411)
T ss_pred             CEEecCEEEcccCCCCCCCccHhHHHHHHHHHHhCCeEEEEEecCCCCCCCcHHHHHHHHHHhccCCc--ccEEEEEEEe
Confidence            4799999999999997 666778887653     9999999999999999999988888877665444  9999998873


Q ss_pred             eCC-CCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC----------
Q 019093           76 LTD-TTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV----------  144 (346)
Q Consensus        76 ~~~-~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~----------  144 (346)
                      ... +....++.+|.++| ++| |+|..+     +....+. ..++++|++++++|+++++||||++++.          
T Consensus       113 ~~~~~~~l~e~~~l~~~G-v~g-~~f~~~-----~~~~~~~-~~l~~~~~~a~~~g~~v~iH~E~~~l~~~~~~~~g~~~  184 (411)
T TIGR00857       113 QGNQGKELTEAYELKEAG-AVG-RMFTDD-----GSEVQDI-LSMRRALEYAAIAGVPIALHAEDPDLIYGGVMHEGPSA  184 (411)
T ss_pred             cCCccccHHHHHHHHHCC-cEE-EEEEeC-----CcccCCH-HHHHHHHHHHHHcCCEEEEecCCHHHHhhhhhcCCccc
Confidence            211 11356788888788 778 444321     1122355 8899999999999999999999987632          


Q ss_pred             -------ChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccCCCCC
Q 019093          145 -------DIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQGGLRP  215 (346)
Q Consensus       145 -------~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~~~~~  215 (346)
                             .+..+|..++.+++  .+|+.+|+|+||+|+||++++++|+++|  |.+||||||||||+||++++..  +++
T Consensus       185 ~~~~~~~~p~~aE~~ai~~~~--~la~~~~~~~~i~Hvs~~~~l~~i~~a~~~g~~v~~ev~ph~L~~~~~~~~~--~~~  260 (411)
T TIGR00857       185 AQLGLPARPPEAEEVAVARLL--ELAKHAGCPVHICHISTKESLELIVKAKSQGIKITAEVTPHHLLLSEEDVAR--LDG  260 (411)
T ss_pred             HhhCCCCCCHHHHHHHHHHHH--HHHHHHCCCEEEEeCCCHHHHHHHHHHHHcCCcEEEeechhhheecHHHHhC--CCc
Confidence                   12468999999999  8999999999999999999999999988  7899999999999999999864  468


Q ss_pred             ceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCC--CCCccchhHHHHHHHHHHHhc-CCHHHHHHH
Q 019093          216 HNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACG--CAGIYNAPVALSLYAKVFEEM-GALDKLEAF  292 (346)
Q Consensus       216 ~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~--~~G~~g~e~~lp~l~~~~~~~-~~l~~lv~~  292 (346)
                      ++|||||||+++||++||++|++|.||+ |+|||+||+.++|..++.  .+|++|+|+.+|++++.+++. .++++++++
T Consensus       261 ~~k~~Pplr~~~~~~~L~~~l~~g~i~~-i~sDh~p~~~~~k~~~~~~~~~G~~g~e~~~~~~~~~~~~~~~~~~~~~~~  339 (411)
T TIGR00857       261 NGKVNPPLREKEDRLALIEGLKDGIIDI-IATDHAPHTLEEKTKEFAAAPPGIPGLETALPLLLQLLVKGLISLKDLIRM  339 (411)
T ss_pred             cEEEcCCCCCHHHHHHHHHHHhcCCCcE-EEcCCCCCChHHccCCHhhCCCCceeHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence            9999999999999999999999999999 999999999999876554  469999999999999876654 589999999


Q ss_pred             HchhhhhhcCCCC-C------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093          293 TSFNGPDFYGLPR-N------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI  346 (346)
Q Consensus       293 ~s~nPAki~gl~~-k------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~  346 (346)
                      +|.|||++||++. +      +|||+|||  ..|+++.++++++++|||| +|++++|+|.++
T Consensus       340 ~t~~pa~~~g~~~~G~l~~G~~ADlvi~d~~~~~~~~~~~~~~~~~~sp~-~g~~~~g~v~~t  401 (411)
T TIGR00857       340 LSINPARIFGLPDKGTLEEGNPADITVFDLKKEWTINAETFYSKAKNTPF-EGMSLKGKPIAT  401 (411)
T ss_pred             HhHHHHHHhCCCCCCccCCCCcCCEEEEcCCCCEEEchHHCccCCCCCCc-CCCEEEeEEEEE
Confidence            9999999999964 2      79999999  7899999999999999999 799999998763

All proteins described by this model should represent active and inactive dihydroorotase per se and functionally equivalent domains of multifunctional proteins from higher eukaryotes, but exclude related proteins such as allantoinase.

>PRK02382 dihydroorotase; Provisional

Probab=100.00  E-value=5.8e-65  Score=504.89  Aligned_cols=323  Identities=21%  Similarity=0.254  Sum_probs=275.2

Q ss_pred             eEEecCccccceecCC-CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLY   75 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~   75 (346)
                      ++|+||+||+|+|+++ +..++|++.+++     |||||+++|||+.|+.++.+.++.+.+.+++.+.  +||.++++. 
T Consensus        50 ~~v~PG~ID~H~H~~~~g~~~~e~~~~~~~aa~~gGvTtv~~~~~t~p~~~~~~~~~~~~~~a~~~s~--v~~~~~~~~-  126 (443)
T PRK02382         50 MLLLPGGIDVHVHFREPGYTHKETWYTGSRSAAAGGVTTVVDQPNTDPPTVDGESFDEKAELAARKSI--VDFGINGGV-  126 (443)
T ss_pred             CEEcCCEeeeeeeccCCCCCchhhHHHHHHHHHhCCcEEEEECCCCCCCCChHHHHHHHHHHhCcCce--EEEEEEeee-
Confidence            4799999999999998 777888887754     9999999999999999998888887776655443  899888664 


Q ss_pred             eCCCCCHHHHHHHHHcCCeeEE-EEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC----------
Q 019093           76 LTDTTSPDEIKLARKTGVVFAV-KLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV----------  144 (346)
Q Consensus        76 ~~~~~~~~el~~l~~~G~v~~~-Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~----------  144 (346)
                       ..  +.+++.+|.+.| +.++ |+|+.+.  .+...+ +. ..++++|++++++|+++++||||.++..          
T Consensus       127 -~~--~~~~l~~l~~~g-v~~~gkv~~~~~--~~~~~~-~~-~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~~~g~~  198 (443)
T PRK02382        127 -TG--NWDPLESLWERG-VFALGEIFMADS--TGGMGI-DE-ELFEEALAEAARLGVLATVHAEDEDLFDELAKLLKGDA  198 (443)
T ss_pred             -cc--chhhHHHHHhcC-ccceeEEEEEec--CCCccc-CH-HHHHHHHHHHHhcCCeEEEecCCHHHHHHhhHhhcCCC
Confidence             32  466788888888 7888 9998531  122333 44 7899999999999999999999986521          


Q ss_pred             --------ChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCc
Q 019093          145 --------DIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPH  216 (346)
Q Consensus       145 --------~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~  216 (346)
                              .+..+|..++.+++  .+|+.+|+|+||+|+||++++++|+++|   ||||||||||+||++++..  +++.
T Consensus       199 ~~~~~~~~~p~~~E~~av~~~~--~la~~~g~~~hi~h~ss~~~~~~i~~~~---vt~ev~ph~L~l~~~~~~~--~~~~  271 (443)
T PRK02382        199 DADAWSAYRPAAAEAAAVERAL--EVASETGARIHIAHISTPEGVDAARREG---ITCEVTPHHLFLSRRDWER--LGTF  271 (443)
T ss_pred             CHhhCCCcCCHHHHHHHHHHHH--HHHHHhCCCEEEEECCCHHHHHHHHHCC---cEEEEchhhhhcCHHHHhc--cCce
Confidence                    01358999999999  8999999999999999999999999875   9999999999999999864  4688


Q ss_pred             eEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCC--CCccchhHHHHHHHHHHHh-cCCHHHHHHHH
Q 019093          217 NYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGC--AGIYNAPVALSLYAKVFEE-MGALDKLEAFT  293 (346)
Q Consensus       217 ~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~--~G~~g~e~~lp~l~~~~~~-~~~l~~lv~~~  293 (346)
                      +|||||||+++||++||++|++|+||+ |+|||+||+.++|..+++.  +|++|+|+++|++++.+.+ +.+++++++++
T Consensus       272 ~k~~PPlr~~~d~~aL~~~l~~g~i~~-i~sDh~P~~~~~K~~~~~~~~~G~~g~e~~~~~~~~~~~~~~~~l~~~~~~~  350 (443)
T PRK02382        272 GKMNPPLRSEKRREALWERLNDGTIDV-VASDHAPHTREEKDADIWDAPSGVPGVETMLPLLLAAVRKNRLPLERVRDVT  350 (443)
T ss_pred             EEEcCCCCChHHHHHHHHHHhCCCCCE-EEcCCCCCCHHHhcCChhhCCCCcccHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence            999999999999999999999999999 9999999999999876653  5999999999999876544 35899999999


Q ss_pred             chhhhhhcCCCCC-------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEE
Q 019093          294 SFNGPDFYGLPRN-------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL  345 (346)
Q Consensus       294 s~nPAki~gl~~k-------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~  345 (346)
                      |.|||++||++.+       +|||+|||  ..|+++.+.++|+++|||| +|+++. +|.+
T Consensus       351 t~~pA~~~g~~~~G~l~~G~~AD~vi~d~~~~~~~~~~~~~s~~~~sp~-~g~~~~-~v~~  409 (443)
T PRK02382        351 AANPARIFGLDGKGRIAEGYDADLVLVDPDAAREIRGDDLHSKAGWTPF-EGMEGV-FPEL  409 (443)
T ss_pred             hHHHHHHcCCCCCCccCCCCcCCEEEEcCCCcEEEcHHHhcccCCCCCc-CCCEec-eEEE
Confidence            9999999999542       79999999  8899999999999999999 799866 5543

>TIGR03178 allantoinase allantoinase

Probab=100.00  E-value=5.1e-64  Score=498.26  Aligned_cols=331  Identities=17%  Similarity=0.165  Sum_probs=281.8

Q ss_pred             eEEecCccccceecCC-CccccccccccC-----CceeEEEeCC-CCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMP-NLKPPITTTAAAVAYRESILKALPASSNFTPLMTL   74 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mP-nt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~   74 (346)
                      ++|+||+||+|+|+++ +..++|++.+++     |||||+++|| |+.|+.++.+.+..+.+.+++.+.  +||+++++.
T Consensus        47 ~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~~~gGvTtv~dmp~~~~p~~~~~~~~~~~~~~~~~~~~--~d~~~~~~~  124 (443)
T TIGR03178        47 LVVFPGVVDTHVHINEPGRTEWEGFETGTRAAAAGGITTYIDMPLNSIPATTTRASLEAKFEAAKGKLA--VDVGFWGGL  124 (443)
T ss_pred             CEEeccEeccccccCCCCccccchHHHHHHHHHcCCeEEEEECCCCCCCCCCcHHHHHHHHHHhccCCc--eeEEEEecc
Confidence            4799999999999998 777888888763     9999999999 788988888888887776654333  899988665


Q ss_pred             EeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCC---------
Q 019093           75 YLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVD---------  145 (346)
Q Consensus        75 ~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~---------  145 (346)
                        ++ .+.+++.++.+.| +.+||+||++. +.......+. ..++++|+++++.|+++++|||+.++...         
T Consensus       125 --~~-~~~~~i~~~~~~G-~~~ik~~~~~~-~~~~~~~~~~-~~l~~~~~~a~~~g~~v~~H~E~~~~~~~~~~~~~~~g  198 (443)
T TIGR03178       125 --VP-YNLDDLRELDEAG-VVGFKAFLSPS-GDDEFPHVDD-WQLYKGMRELARLGQLLLVHAENPAITSALGEEAPPQG  198 (443)
T ss_pred             --CC-CCHHHHHHHHHCC-CcEEEEEeccc-CCCCcccCCH-HHHHHHHHHHHhcCCeEEEeccChHHHHHHHHHHHhcC
Confidence              44 3678899998889 78999998642 1112223344 78999999999999999999999875320         


Q ss_pred             -----------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccCC
Q 019093          146 -----------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQGG  212 (346)
Q Consensus       146 -----------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~~  212 (346)
                                 +..+|.+++.+++  .+++.+|+|+|++|+|+.+++++|+++|  |.++++|||||||+|+++++..  
T Consensus       199 ~~~~~~~~~~~p~~ae~~~~~~~~--~la~~~g~~vhi~Hiss~~~~~~i~~~~~~g~~it~e~~ph~l~l~~~~~~~--  274 (443)
T TIGR03178       199 GVGADAYLASRPVFAEVEAIRRTL--ALAKVTGCRVHVVHLSSAEAVELITEAKQEGLDVTVETCPHYLTLTAEEVPD--  274 (443)
T ss_pred             CCChhHhcCcCCHHHHHHHHHHHH--HHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCcEEEEECccceEecHHHhhC--
Confidence                       1357889999999  8999999999999999999999999987  7899999999999999999864  


Q ss_pred             CCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCcccc-ccCCC--CCCccchhHHHHHHHHHHHh--cCCHH
Q 019093          213 LRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRK-ECACG--CAGIYNAPVALSLYAKVFEE--MGALD  287 (346)
Q Consensus       213 ~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K-~~~~~--~~G~~g~e~~lp~l~~~~~~--~~~l~  287 (346)
                      +++.++|+||||++++|++||++|++|.||+ |+|||+||+.++| ..+|.  .+|++|+|+.+|++++..++  +.+++
T Consensus       275 ~~~~~~~~Pplr~~~~~~~l~~~l~~G~i~~-i~SDh~p~~~~~K~~~~~~~~~~G~~g~e~~l~~~~~~~~~~~~l~~~  353 (443)
T TIGR03178       275 GGTLAKCAPPIRDLANQEGLWEALLNGLIDC-VVSDHSPCTPDLKRAGDFFKAWGGIAGLQSTLDVMFDEAVQKRGLPLE  353 (443)
T ss_pred             cCcceEEcCCCCChHHHHHHHHHHHcCCccE-EeCCCCCCChHHcCcCChhhCCCCeeEHHHhHHHHHHHHHHhcCCCHH
Confidence            4689999999999999999999999999999 9999999999888 44443  35999999999999875533  45899


Q ss_pred             HHHHHHchhhhhhcCCCC-C------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093          288 KLEAFTSFNGPDFYGLPR-N------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI  346 (346)
Q Consensus       288 ~lv~~~s~nPAki~gl~~-k------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~  346 (346)
                      ++++++|.|||++||++. +      +|||+|||  ++|+++.+.++|+++|||| +|++++|+|.++
T Consensus       354 ~~~~~~t~~pA~~~g~~~~G~l~~G~~Ad~vi~d~~~~~~~~~~~~~~~~~~~p~-~g~~~~g~v~~t  420 (443)
T TIGR03178       354 DIARLMATNPAKRFGLAQKGRIAPGKDADFVFVDPDESYTLTPDDLYYRHKVSPY-VGRTIGGRVRAT  420 (443)
T ss_pred             HHHHHHhHHHHHHcCCCCCCccCCCCcCCEEEEcCCCcEEEcHHHhhhcCCCCCc-CCcEEeeEEEEE
Confidence            999999999999999943 2      89999999  6899999999999999999 799999999763

This enzyme carries out the first step in the degradation of allantoin, a ring-opening hydrolysis. The seed members of this model are all in the vicinity of other genes involved in the processes of xanthine/urate/allantoin catabolism. Although not included in the seed, many eukaryotic homologs of this family are included above the trusted cutoff. Below the noise cutoff are related hydantoinases.

>PRK09236 dihydroorotase; Reviewed

Probab=100.00  E-value=3.8e-62  Score=484.84  Aligned_cols=327  Identities=20%  Similarity=0.216  Sum_probs=276.2

Q ss_pred             eEEecCccccceecCC-CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLY   75 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~   75 (346)
                      ++|+||+||+|+|+++ +..++|++.+++     |||||+++|||+.|+.++.+.+..+++.+++.+.  +||++++++ 
T Consensus        50 ~~v~PG~ID~HvH~~~~~~~~~e~~~~~~~aa~~~GvTtv~d~p~~~p~~~~~~~~~~~~~~~~~~~~--~d~~~~~~~-  126 (444)
T PRK09236         50 RYLLPGMIDDQVHFREPGLTHKGDIASESRAAVAGGITSFMEMPNTNPPTTTLEALEAKYQIAAQRSL--ANYSFYFGA-  126 (444)
T ss_pred             CEECCCEEEcccccccCcccccccHHHHHHHHHhCCcEEEEeCCCCCCCcCcHHHHHHHHHHhccCeE--EEEEEEecc-
Confidence            4799999999999998 777788887654     9999999999999999999988887776654443  899998764 


Q ss_pred             eCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC----------C
Q 019093           76 LTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV----------D  145 (346)
Q Consensus        76 ~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~----------~  145 (346)
                       .. .+.+++.+|.+.| +.|||+|+.+.  .+..++.+. ..++++++   ..|.++++||||.+++.          +
T Consensus       127 -~~-~~~~e~~~l~~~g-~~g~k~~~~~~--~~~~~~~~~-~~~~~~~~---~~~~~v~~H~e~~~~~~~~~~~~~~~~g  197 (444)
T PRK09236        127 -TN-DNLDEIKRLDPKR-VCGVKVFMGAS--TGNMLVDNP-ETLERIFR---DAPTLIATHCEDTPTIKANLAKYKEKYG  197 (444)
T ss_pred             -Cc-ccHHHHHHHHHcc-CcEEEEEeccC--CCCcccCcH-HHHHHHHH---hcCCEEEEecCCHHHHHHHHHHHHHhcC
Confidence             43 3678898988888 78999998531  122334554 45666654   44899999999875431          1


Q ss_pred             ------------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccC
Q 019093          146 ------------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQG  211 (346)
Q Consensus       146 ------------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~  211 (346)
                                  ...+|..++.+++  .+|+.+|+|+||+|+||++++++++++|  |.+||||||||||+|+++++.. 
T Consensus       198 ~~~~~~~~~~~rp~~ae~~av~~~~--~la~~~~~~~hi~h~st~~~~~~i~~~~~~g~~vt~e~~~H~l~l~~~~~~~-  274 (444)
T PRK09236        198 DDIPAEMHPLIRSAEACYKSSSLAV--SLAKKHGTRLHVLHISTAKELSLFENGPLAEKRITAEVCVHHLWFDDSDYAR-  274 (444)
T ss_pred             CCCChhhccccCCHHHHHHHHHHHH--HHHHHHCCCEEEEeCCCHHHHHHHHHHHHCCCCEEEEEchhhhhcCHHHHhc-
Confidence                        1257888899999  8999999999999999999999999887  7899999999999999999875 


Q ss_pred             CCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCC--CCCccchhHHHHHHHHHHHh-cCCHHH
Q 019093          212 GLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACG--CAGIYNAPVALSLYAKVFEE-MGALDK  288 (346)
Q Consensus       212 ~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~--~~G~~g~e~~lp~l~~~~~~-~~~l~~  288 (346)
                       +++.+++|||||++++|++||+++++|.||+ |+|||+||+.++|..+|.  .+|++|+|+++|++++.+.+ ..++++
T Consensus       275 -~~~~~~~~Pplr~~~~~~~l~~~l~~G~i~~-igtDh~p~~~~~k~~~~~~~~~G~~~~e~~l~~l~~~v~~~~~~~~~  352 (444)
T PRK09236        275 -LGNLIKCNPAIKTASDREALRQALADDRIDV-IATDHAPHTWEEKQGPYFQAPSGLPLVQHALPALLELVHEGKLSLEK  352 (444)
T ss_pred             -cCceEEECCCCCCHHHHHHHHHHHhCCCCcE-EECCCCCCCHHHhcCCcccCCCCcccHHHHHHHHHHHHHhcCCCHHH
Confidence             4689999999999999999999999999999 999999999999976665  35999999999999875444 358999


Q ss_pred             HHHHHchhhhhhcCCCC-C------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093          289 LEAFTSFNGPDFYGLPR-N------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI  346 (346)
Q Consensus       289 lv~~~s~nPAki~gl~~-k------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~  346 (346)
                      +++++|.||||+||++. +      +|||+|||  ++|+++.++++|+++|||| +|++++|+|.++
T Consensus       353 ~~~~~t~~pA~~lgl~~~G~l~~G~~ADlvi~d~~~~~~~~~~~~~s~~~~sp~-~g~~~~g~v~~t  418 (444)
T PRK09236        353 VVEKTSHAPAILFDIKERGFIREGYWADLVLVDLNSPWTVTKENILYKCGWSPF-EGRTFRSRVATT  418 (444)
T ss_pred             HHHHHHHhHHHhcCCCCCCccccCCcCCEEEEcCCCCEEEchHHhcccCCCCCC-CCCEEeeeEEEE
Confidence            99999999999999953 2      89999999  8899999999999999999 799999999764

>PLN02942 dihydropyrimidinase

Probab=100.00  E-value=5.8e-61  Score=481.01  Aligned_cols=329  Identities=16%  Similarity=0.126  Sum_probs=272.1

Q ss_pred             eEEecCccccceecCC---CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD---GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMT   73 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~---g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~   73 (346)
                      ++|+||+||+|+|+++   +..++|++.|++     ||||||+||++.. .....+.++.+++++.+ +.  +||+++++
T Consensus        53 ~~v~PG~ID~H~H~~~~~~~~~~~ed~~s~s~aAl~gGvTTv~D~~~~~-~~~~~~~~~~~~~~~~~-~~--~d~~~~~~  128 (486)
T PLN02942         53 KFVMPGGIDPHTHLAMPFMGTETIDDFFSGQAAALAGGTTMHIDFVIPV-NGNLLAGYEAYEKKAEK-SC--MDYGFHMA  128 (486)
T ss_pred             CEEecCEeeeeeccCcccCCCcccchHHHHHHHHHcCCCeEEEeCCCCC-CCCHHHHHHHHHHHHhh-cC--CCEEEEEE
Confidence            4899999999999997   356789998875     9999999996433 22336777777666653 33  89998876


Q ss_pred             EEeCCCC--CHHHHHHHHH-cCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC------
Q 019093           74 LYLTDTT--SPDEIKLARK-TGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV------  144 (346)
Q Consensus        74 ~~~~~~~--~~~el~~l~~-~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~------  144 (346)
                      .  ++..  ..+++.++.+ .| +.+||+|+++.   ....+ ++ +.+++++++++++|.++++||||.++..      
T Consensus       129 ~--~~~~~~~~~e~~~l~~~~g-v~~~k~~~~~~---~~~~~-~~-~~l~~~~~~a~~~~~~v~~HaE~~~~~~~~~~~~  200 (486)
T PLN02942        129 I--TKWDDTVSRDMETLVKEKG-INSFKFFMAYK---GSLMV-TD-ELLLEGFKRCKSLGALAMVHAENGDAVFEGQKRM  200 (486)
T ss_pred             e--cCCcHhHHHHHHHHHHhCC-CceEEEEEecC---CCCCC-CH-HHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHH
Confidence            5  3321  2457777754 57 78999998642   11223 44 7899999999999999999999976421      


Q ss_pred             --------------ChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhh
Q 019093          145 --------------DIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNAL  208 (346)
Q Consensus       145 --------------~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~  208 (346)
                                    .+..+|..++.+++  .+++++|+|+||+|+|++++++.|+.+|  |.+|+||||||||+|+++++
T Consensus       201 ~~~G~~~~~~~~~~rP~~~E~~av~~~~--~la~~~g~~~~i~H~s~~~~~e~i~~~k~~G~~Vt~e~~ph~L~l~~~~~  278 (486)
T PLN02942        201 IELGITGPEGHALSRPPLLEGEATARAI--RLAKFVNTPLYVVHVMSIDAMEEIARARKSGQRVIGEPVVSGLVLDDSKL  278 (486)
T ss_pred             HHcCCCChhhhhccCCchHHHHHHHHHH--HHHHHhCCCEEEEECCCHHHHHHHHHHHHCCCcEEEEECchhheeCHHHh
Confidence                          12358999999999  8999999999999999999999999887  89999999999999999998


Q ss_pred             ccCC--CCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCcccccc---CCC--CCCccchhHHHHHHHHHHH
Q 019093          209 FQGG--LRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKEC---ACG--CAGIYNAPVALSLYAKVFE  281 (346)
Q Consensus       209 ~~~~--~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~---~~~--~~G~~g~e~~lp~l~~~~~  281 (346)
                      ...+  +++.+|||||||++++|++||+++++|.||+ |||||+||+.++|..   +|.  .+|++|+|+.+|++++.++
T Consensus       279 ~~~~~~~~~~~k~~PPlr~~~~~~~L~~~l~~G~i~~-igTDh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l~~~~~~~~  357 (486)
T PLN02942        279 WDPDFTIASKYVMSPPIRPAGHGKALQAALSSGILQL-VGTDHCPFNSTQKAFGKDDFRKIPNGVNGIEERMHLVWDTMV  357 (486)
T ss_pred             cCcccccCcceEECCCCCCHHHHHHHHHHhcCCceEE-EECCCCCCChHHhhcccCCHhhCCCCcccHHHHHHHHHHHHH
Confidence            5311  4688999999999999999999999999999 999999999988853   343  3599999999999987655


Q ss_pred             hc--CCHHHHHHHHchhhhhhcCC-CCC-------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093          282 EM--GALDKLEAFTSFNGPDFYGL-PRN-------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI  346 (346)
Q Consensus       282 ~~--~~l~~lv~~~s~nPAki~gl-~~k-------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~  346 (346)
                      +.  .+++++++++|.||||+||| +++       +|||+|||  .+|+|+.+.++|+++|||| +|++++|+|.++
T Consensus       358 ~~~~i~~~~~l~~~t~~pA~~lgl~~~~G~l~~G~~ADlv~vd~~~~~~v~~~~~~s~~~~~py-~g~~l~g~v~~t  433 (486)
T PLN02942        358 ESGQISPTDYVRVTSTECAKIFNIYPRKGAILAGSDADIIILNPNSTFTISAKTHHSRIDTNVY-EGRRGKGKVEVT  433 (486)
T ss_pred             HcCCCCHHHHHHHHHHHHHHHhCCCCCCCCcCCCCcCCEEEEcCCccEEEcHHHccccCCCCCc-cCcEeeeeEEEE
Confidence            54  48999999999999999999 432       89999999  8999999999999999999 799999999863

>cd01315 L-HYD_ALN L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in biotechnology)

Probab=100.00  E-value=9.5e-61  Score=475.39  Aligned_cols=331  Identities=17%  Similarity=0.188  Sum_probs=280.6

Q ss_pred             eEEecCccccceecCC-CccccccccccC-----CceeEEEeCC-CCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMP-NLKPPITTTAAAVAYRESILKALPASSNFTPLMTL   74 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mP-nt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~   74 (346)
                      ++|+||+||+|+|+++ +..++|++.+++     ||||||++|| |+.|+.++.+.++.+.+..+..+.  +||++++++
T Consensus        48 ~~v~PG~ID~H~H~~~~~~~~~e~~~~~s~aal~gGvTtv~d~p~~~~p~~~~~~~~~~~~~~~~~~~~--~d~~~~~~~  125 (447)
T cd01315          48 LVVMPGLIDTHVHINEPGRTEWEGFETGTKAAAAGGITTIIDMPLNSIPPTTTVENLEAKLEAAQGKLH--VDVGFWGGL  125 (447)
T ss_pred             CEEeccEeeceeccCCCCccccccHHHHHHHHHhCCceEEEeCCCCCCCCcCCHHHHHHHHHHhccCce--eeEEEEEee
Confidence            4799999999999998 777888887764     9999999999 667888888888877776544333  899888765


Q ss_pred             EeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCC---------
Q 019093           75 YLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVD---------  145 (346)
Q Consensus        75 ~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~---------  145 (346)
                        ++. ..+++.++.+.| +.+||+|+.+.. ..+....+. ..+++++++++++|+++++|+||.+++..         
T Consensus       126 --~~~-~~~ei~~l~~~G-~~giKv~~~~~~-~~~~~~~~~-~~l~~~~~~a~~~g~~v~vH~e~~~~~~~~~~~~~~~g  199 (447)
T cd01315         126 --VPG-NLDQLRPLDEAG-VVGFKCFLCPSG-VDEFPAVDD-EQLEEAMKELAKTGSVLAVHAENPEITEALQEQAKAKG  199 (447)
T ss_pred             --cCC-CHHHHHHHHHcC-CcEEEEEecccC-CCCcccCCH-HHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHhHhhcC
Confidence              443 678899998888 789999986421 122223344 78999999999999999999999875320         


Q ss_pred             -----------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccCC
Q 019093          146 -----------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQGG  212 (346)
Q Consensus       146 -----------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~~  212 (346)
                                 ...+|..++.+++  .+|+.+|+|+||+|+|+++++++++++|  |.+++||||||||+|+++++..  
T Consensus       200 ~~~~~~~~~~~p~~~e~~~~~~~~--~la~~~g~~ihi~h~s~~~~~~~i~~~~~~g~~i~~e~~~h~l~~~~~~~~~--  275 (447)
T cd01315         200 KRDYRDYLASRPVFTEVEAIQRIL--LLAKETGCRLHIVHLSSAEAVPLIREARAEGVDVTVETCPHYLTFTAEDVPD--  275 (447)
T ss_pred             CCChHHhhccCCHHHHHHHHHHHH--HHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCceEEEeccccEEEcHHHccC--
Confidence                       1246888999999  8999999999999999999999999887  7899999999999999999865  


Q ss_pred             CCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccc---cCCC--CCCccchhHHHHHHHHHHHh--cCC
Q 019093          213 LRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKE---CACG--CAGIYNAPVALSLYAKVFEE--MGA  285 (346)
Q Consensus       213 ~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~---~~~~--~~G~~g~e~~lp~l~~~~~~--~~~  285 (346)
                      +++.++|+||||+++||++||++|++|.||+ |+|||+||+.++|.   .++.  ..|++|+|+.+|++++.+++  ..+
T Consensus       276 ~~~~~~~~Pplr~~~~~~~l~~~l~~g~i~~-i~SDh~p~~~~~k~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~  354 (447)
T cd01315         276 GGTEFKCAPPIRDAANQEQLWEALENGDIDM-VVSDHSPCTPELKLLGKGDFFKAWGGISGLQLGLPVMLTEAVNKRGLS  354 (447)
T ss_pred             CCCceEECCCCCChHHHHHHHHHHhCCceeE-EeCCCCCCCHHHhccCCCChhhCCCCeeEHHHhHHHHHHHHHHcCCCC
Confidence            4689999999999999999999999999999 99999999999986   3333  35999999999999876554  358


Q ss_pred             HHHHHHHHchhhhhhcCCC-CC-------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093          286 LDKLEAFTSFNGPDFYGLP-RN-------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI  346 (346)
Q Consensus       286 l~~lv~~~s~nPAki~gl~-~k-------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~  346 (346)
                      ++++++++|.|||++||++ ++       +|||+|+|  .+|+++.+.++++++|+|| +|++++|+|.++
T Consensus       355 ~~~~~~~~t~~pa~~~g~~~~~G~l~~g~~Ad~~v~d~~~~~~~~~~~~~~~~~~~~~-~g~~~~g~v~~t  424 (447)
T cd01315         355 LEDIARLMCENPAKLFGLSHQKGRIAVGYDADFVVWDPEEEFTVDAEDLYYKNKISPY-VGRTLKGRVHAT  424 (447)
T ss_pred             HHHHHHHHhHHHHHHhCCCCCCccccCCCCCCEEEEcCCCCEEEcHHHccccCCCCCc-cCeEEeeeEEEE
Confidence            9999999999999999995 32       89999999  7899999999999999999 799999999763

But L-HYDs differ by having an L-enantio specificity and by lacking activity on possible natural substrates such as dihydropyrimidines. Allantoinase catalyzes the hydrolytic cleavage of the five-member ring of allantoin (5-ureidohydantoin) to form allantoic acid.

>KOG2584 consensus Dihydroorotase and related enzymes [Nucleotide transport and metabolism]

Probab=100.00  E-value=6.4e-62  Score=456.07  Aligned_cols=333  Identities=16%  Similarity=0.136  Sum_probs=288.5

Q ss_pred             eEEecCccccceecCC---CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD---GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMT   73 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~---g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~   73 (346)
                      ++|+||+||+|+|++.   |.+.+|||.+|+     ||+|+||||+-..++.+..+.++.+++++....  +|||++|++
T Consensus        62 ~~ViPGgID~Hthlq~p~~G~ts~DdF~~GTkAAlaGGtTmiID~vlp~~~~slv~afe~wr~~Ad~k~--cCDyglhv~  139 (522)
T KOG2584|consen   62 KMVIPGGIDPHTHLQMPFMGMTSVDDFFQGTKAALAGGTTMIIDFVLPDKGTSLVEAFEKWREWADPKV--CCDYGLHVG  139 (522)
T ss_pred             cEEecCccCccceeccccCCccchhhhhcccHHHhcCCceEEEEEecCCCCchHHHHHHHHHhhcCCce--eeeeeeeEe
Confidence            5799999999999997   788899999985     999999999866667888999999988776443  399999999


Q ss_pred             EEeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC---------
Q 019093           74 LYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV---------  144 (346)
Q Consensus        74 ~~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~---------  144 (346)
                      ++.+.....+||+-|.+.-+|.|||+||+|.   +-.++.|  .+||++|+.++++|.+.+|||||.+++.         
T Consensus       140 It~W~~~v~eem~~l~~ekGvnsF~~fmayk---~~~~v~d--~~lye~l~~~~~lgala~vHAEngd~iae~q~~~l~~  214 (522)
T KOG2584|consen  140 ITWWSPSVKEEMEILVKEKGVNSFKFFMAYK---DLYMVRD--SELYEALKVCAELGALAMVHAENGDAIAEGQQRLLEL  214 (522)
T ss_pred             eeecCcchHHHHHHHhhhcCcceEEeeeeec---cccccCH--HHHHHHHHHHhhcchhheehhhcchhhhhhhhHHHHc
Confidence            9643334677888887643399999999873   3345666  7999999999999999999999998762         


Q ss_pred             C-----------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccC
Q 019093          145 D-----------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQG  211 (346)
Q Consensus       145 ~-----------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~  211 (346)
                      +           +..-|++|+.|++  .+|+..+||+|++||.|+.+.++|.++|  |.-|+.|+.-..|.++...|...
T Consensus       215 gitgPEgh~lSRPee~EaEA~~rai--~ia~~~ncPlyvvhVmsksaa~~Ia~aRk~g~~v~gepita~l~~dg~hy~~~  292 (522)
T KOG2584|consen  215 GITGPEGHELSRPEELEAEATNRAI--TIARQANCPLYVVHVMSKSAADAIALARKKGRVVFGEPITASLGTDGSHYWSK  292 (522)
T ss_pred             CCcCcccccccCchhhhHHHHHHHH--HHHHhcCCCcceEEEeehhHHHHHHHHHhcCceeecccchhhhcccchhhccC
Confidence            1           2457999999999  8999999999999999999999999998  78899999999999998887654


Q ss_pred             CC--CCceEEeCCCCChh-hHHHHHHHHHcCCccEEeecCCCCCCccccccC---CC-CC-CccchhHHHHHHHHHHHhc
Q 019093          212 GL--RPHNYCLPVLKREI-HRQAVVSAVTSGSRKFFLGTDSAPHERGRKECA---CG-CA-GIYNAPVALSLYAKVFEEM  283 (346)
Q Consensus       212 ~~--~~~~k~~PPLR~~~-d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~---~~-~~-G~~g~e~~lp~l~~~~~~~  283 (346)
                      .+  .++|+|+||||+.. .++.||.+|+.|.+.. ++||||||+.++|..+   |. .+ |+.|+|.+|+++|+-.+..
T Consensus       293 ~w~~Aa~~v~sPPlr~d~~t~~~L~~lLa~g~L~~-tgSdhctf~~~qKalgKddFt~ip~GvnGvedrMsviwekgv~~  371 (522)
T KOG2584|consen  293 DWDHAAAFVTSPPLRPDPTTPDGLMDLLAEGDLQL-TGSDHCTFTTEQKALGKDDFTKIPNGVNGVEDRMSVIWEKGVHS  371 (522)
T ss_pred             ChhhcceeeeCCCCCCCCCCHHHHHHHHhcCccce-eecCCCCCCHHHHhhccCccccCCCccccccccceeeeehhccc
Confidence            43  37899999999976 8999999999999999 9999999999999754   43 24 9999999999999755554


Q ss_pred             C--CHHHHHHHHchhhhhhcCC-CCC-------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEE
Q 019093          284 G--ALDKLEAFTSFNGPDFYGL-PRN-------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL  345 (346)
Q Consensus       284 ~--~l~~lv~~~s~nPAki~gl-~~k-------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~  345 (346)
                      |  +..++|.++|+|.|||||| |+|       ||||||||  ...+|+++..+++++++.| |||+++|.|..
T Consensus       372 G~md~~~fVavtstnaAkifnlYprKGrIavGsDADiVIwdp~at~tIS~~th~~~~d~Nif-EGm~~~G~plv  444 (522)
T KOG2584|consen  372 GKMDENRFVAVTSTNAAKIFNLYPRKGRIAVGSDADIVIWDPNATKTISAKTHHSANDFNIF-EGMTVHGVPLV  444 (522)
T ss_pred             CccCcccEEEEecccchhheeccCcCceecccCCCcEEEECCCcceEeccccccccccceee-cCcEecceeEE
Confidence            4  5779999999999999999 887       99999999  8899999999999999999 89999998863

>PRK09357 pyrC dihydroorotase; Validated

Probab=100.00  E-value=5e-60  Score=467.12  Aligned_cols=326  Identities=24%  Similarity=0.289  Sum_probs=274.2

Q ss_pred             eEEecCccccceecCC-CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLY   75 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~   75 (346)
                      ++|+||+||+|+|+|. +..++|++.+++     |||||+++||++.|+.++.+.++.+.+.+++...  +||.+++.+.
T Consensus        49 ~~v~PG~ID~H~H~~~~~~~~~e~~~~~~~~a~~~GvTt~~d~~~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  126 (423)
T PRK09357         49 LVVAPGLVDLHVHLREPGQEDKETIETGSRAAAAGGFTTVVAMPNTKPVIDTPEVVEYVLDRAKEAGL--VDVLPVGAIT  126 (423)
T ss_pred             CEEeCCEEecccccCCCCccccccHHHHHHHHHhCCCeEEEecCCCCCCCCcHHHHHHHHHHhccCCc--ccEEEEEEEE
Confidence            4799999999999998 667788887654     9999999999999999988888777766554433  7898887652


Q ss_pred             eC-CCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC------C---
Q 019093           76 LT-DTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV------D---  145 (346)
Q Consensus        76 ~~-~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~------~---  145 (346)
                      .. .+...+++.++.+.| +.+||.+.        ....+. +.++++++.++++|.++++|+|+..+..      +   
T Consensus       127 ~~~~~~~~~~~~~l~~~g-v~~~~~~~--------~~~~~~-~~l~~~~~~a~~~g~~v~iH~ee~~~~~~~~~~~g~~~  196 (423)
T PRK09357        127 KGLAGEELTEFGALKEAG-VVAFSDDG--------IPVQDA-RLMRRALEYAKALDLLIAQHCEDPSLTEGGVMNEGEVS  196 (423)
T ss_pred             eCCCCccHHHHHHHHhCC-cEEEECCC--------cccCCH-HHHHHHHHHHHhcCCEEEEeCCCHHHhhcccccCChhh
Confidence            11 112466777777777 66776431        112244 7899999999999999999999876532      1   


Q ss_pred             --------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccCCCCC
Q 019093          146 --------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQGGLRP  215 (346)
Q Consensus       146 --------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~~~~~  215 (346)
                              ...+|..++.+.+  .+|+.+|+|+||+|+|+++++++++.+|  |.+|+||+|||||+||++++..  +++
T Consensus       197 ~~~~~~~~p~~~E~~~i~~~~--~la~~~g~~~hi~H~s~~~~~~~i~~a~~~g~~v~~e~~ph~L~~~~~~~~~--~~~  272 (423)
T PRK09357        197 ARLGLPGIPAVAEEVMIARDV--LLAEATGARVHICHVSTAGSVELIRWAKALGIKVTAEVTPHHLLLTDEDLLT--YDP  272 (423)
T ss_pred             HHhCCCCCCHHHHHHHHHHHH--HHHHHHCCcEEEEeCCCHHHHHHHHHHHHcCCCEEEEechHHheEcHHHHhC--cCC
Confidence                    1357999999999  8999999999999999999999999987  7899999999999999999864  468


Q ss_pred             ceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCC--CCCccchhHHHHHHHHHHHh--cCCHHHHHH
Q 019093          216 HNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACG--CAGIYNAPVALSLYAKVFEE--MGALDKLEA  291 (346)
Q Consensus       216 ~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~--~~G~~g~e~~lp~l~~~~~~--~~~l~~lv~  291 (346)
                      .+||+||||+++++++||++|++|.||+ +||||+||+.++|..+|.  .+|++|+|+.+|++++.++.  ..+++++++
T Consensus       273 ~~k~~Pplr~~~~~~~l~~~l~~G~~~~-i~sDh~p~~~~~k~~~~~~~~~G~~g~e~~~~~~~~~~~~~~~~~~~~~~~  351 (423)
T PRK09357        273 NYKVNPPLRTEEDREALIEGLKDGTIDA-IATDHAPHAREEKECEFEAAPFGITGLETALSLLYTTLVKTGLLDLEQLLE  351 (423)
T ss_pred             ceEECCCCCCHHHHHHHHHHHHcCCCeE-EecCCCCCChHHccCCHhhCCCCceEHHHHHHHHHHHHHHcCCCCHHHHHH
Confidence            8999999999999999999999999999 999999999999875554  36999999999999875443  358999999


Q ss_pred             HHchhhhhhcCCCCC------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEE
Q 019093          292 FTSFNGPDFYGLPRN------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL  345 (346)
Q Consensus       292 ~~s~nPAki~gl~~k------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~  345 (346)
                      ++|.|||++||++.+      +|||+|+|  .+|+++++.++++++|||| +|++++|+|.+
T Consensus       352 ~~t~~~A~~~g~~~G~i~~G~~AD~~i~d~~~~~~v~~~~~~~~~~~~p~-~g~~~~g~v~~  412 (423)
T PRK09357        352 KMTINPARILGLPAGPLAEGEPADLVIFDPEAEWTVDGEDFASKGKNTPF-IGMKLKGKVVY  412 (423)
T ss_pred             HHhHHHHHHhCCCCCccCCCCcCCEEEEcCCCCEEEchhhcccCCCCCCC-cCCEEeeEEEE
Confidence            999999999999532      89999999  7899999999999999999 79999999975

>cd01314 D-HYD D-hydantoinases (D-HYD) also called dihydropyrimidases (DHPase) and related proteins; DHPases are a family of enzymes that catalyze the reversible hydrolytic ring opening of the amide bond in five- or six-membered cyclic diamides, like dihydropyrimidine or hydantoin

Probab=100.00  E-value=1.8e-58  Score=459.03  Aligned_cols=333  Identities=17%  Similarity=0.146  Sum_probs=272.3

Q ss_pred             eEEecCccccceecCC-C--ccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-G--DLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMT   73 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g--~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~   73 (346)
                      .+||||+||+|+|++. .  ...+|++.+++     |||||+++||++.|+....+.++....++.....  +||+++..
T Consensus        47 ~~vlPGlID~H~H~~~~~~~~~~~e~~~~~~~~a~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~~~~~  124 (447)
T cd01314          47 KYVLPGGIDPHTHLELPFMGTVTADDFESGTRAAAAGGTTTIIDFAIPNKGQSLLEAVEKWRGKADGKSV--IDYGFHMI  124 (447)
T ss_pred             CEEecCEEeccccccccccCccCcchHHHHHHHHHhCCCcEEEeCCCCCCCCCHHHHHHHHHHHhcCCCc--ccEEEEEe
Confidence            4799999999999987 3  35678887653     9999999999988877777777776655443332  78888766


Q ss_pred             EEeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC---------
Q 019093           74 LYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV---------  144 (346)
Q Consensus        74 ~~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~---------  144 (346)
                      .........+++.++.+.| +.++|+|+++.    .....+. +.+.++++++++.|.++.+|||+...+.         
T Consensus       125 ~~~~~~~~~~~~~~l~~~g-~~~ik~~~~~~----~~~~~s~-~~l~~~~~~a~~~g~~v~~H~E~~~~~~~~~~~~~~~  198 (447)
T cd01314         125 ITDWTDSVIEELPELVKKG-ISSFKVFMAYK----GLLMVDD-EELLDVLKRAKELGALVMVHAENGDVIAELQKKLLAQ  198 (447)
T ss_pred             ecCCChHHHHHHHHHHHcC-CCEEEEEeccC----CCCCCCH-HHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHHHc
Confidence            4111111345777777778 68999998542    1122244 7899999999999999999999865421         


Q ss_pred             C-----------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccC
Q 019093          145 D-----------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQG  211 (346)
Q Consensus       145 ~-----------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~  211 (346)
                      +           +..+|..++.+++  .+++++|+|+||+|+|+++++++|+.+|  |.+|+||+|||||+|+++++.+.
T Consensus       199 g~~~~~~~~~~~p~~~e~~~v~~~~--~la~~~~~~~~~~H~s~~~~~~~i~~~k~~g~~v~~~~~ph~l~~~~~~~~~~  276 (447)
T cd01314         199 GKTGPEYHALSRPPEVEAEATARAI--RLAELAGAPLYIVHVSSKEAADEIARARKKGLPVYGETCPQYLLLDDSDYWKD  276 (447)
T ss_pred             CCCChHHhhhcCCHHHHHHHHHHHH--HHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCeEEEecCchhheeCHHHhccc
Confidence            1           1347888899988  7999999999999999999999999887  78999999999999999998421


Q ss_pred             -CCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCcccccc---CCC--CCCccchhHHHHHHHHHHHhc--
Q 019093          212 -GLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKEC---ACG--CAGIYNAPVALSLYAKVFEEM--  283 (346)
Q Consensus       212 -~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~---~~~--~~G~~g~e~~lp~l~~~~~~~--  283 (346)
                       .+|+.+|||||||++++|++||+++++|.||+ |||||+||+.++|..   +|.  ++|++|+|+++|++|+..+++  
T Consensus       277 ~~~g~~~~~~pplr~~~~~~~l~~~l~~G~i~~-igsDh~~~~~~~k~~~~~~~~~~~~G~~g~e~~l~~l~~~~~~~~~  355 (447)
T cd01314         277 WFEGAKYVCSPPLRPKEDQEALWDGLSSGTLQT-VGSDHCPFNFAQKARGKDDFTKIPNGVPGVETRMPLLWSEGVAKGR  355 (447)
T ss_pred             cccccceEECCCCCChHHHHHHHHHHhCCCeeE-EECCCCCCCHHHhhcccCCHhhCCCCCchHhhhHHHHHHHHHHcCC
Confidence             24688999999999999999999999999999 999999999888853   343  359999999999999755443  


Q ss_pred             CCHHHHHHHHchhhhhhcCC-CCC-------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093          284 GALDKLEAFTSFNGPDFYGL-PRN-------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI  346 (346)
Q Consensus       284 ~~l~~lv~~~s~nPAki~gl-~~k-------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~  346 (346)
                      .+++++++++|.||||+||| +++       +|||+|||  ++|+++.++++|+++|||| +|++++|+|.++
T Consensus       356 ~~~~~~~~~~t~~pA~~~gl~~~~G~l~~G~~AD~vi~d~~~~~~~~~~~~~~~~~~~~~-~g~~~~g~v~~t  427 (447)
T cd01314         356 ITLEKFVELTSTNPAKIFGLYPRKGTIAVGSDADLVIWDPNAEKTISADTHHHNVDYNIF-EGMKVKGWPVVT  427 (447)
T ss_pred             CCHHHHHHHHhhHHHHHhCCCCCCCccCCCCcCCEEEEeCCcCEEecHHHhhccCCCCcc-cCeEEeeeEEEE
Confidence            58999999999999999999 542       89999999  8999999999999999999 799999999763

The hydrolysis of dihydropyrimidines is the second step of reductive catabolism of pyrimidines in human. The hydrolysis of 5-substituted hydantoins in microorganisms leads to enantiomerically pure N-carbamyl amino acids, which are used for the production of antibiotics, peptide hormones, pyrethroids, and pesticides. HYDs are classified depending on their stereoselectivity. This family also includes collapsin response regulators (CRMPs), cytosolic proteins involved in neuronal differentiation and axonal guidance which have strong homology to DHPases, but lack most of the active site residues.

>PRK08323 phenylhydantoinase; Validated

Probab=100.00  E-value=2.8e-58  Score=459.02  Aligned_cols=333  Identities=17%  Similarity=0.142  Sum_probs=273.2

Q ss_pred             eEEecCccccceecCC---CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD---GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMT   73 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~---g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~   73 (346)
                      ++|+||+||+|+|++.   +..++|++++++     |||||+++||++.|+.+..+.++.+.+.....+.  +||++++.
T Consensus        45 ~~v~PGlID~H~H~~~~~~~~~~~e~~~~~~~~a~~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~~~~~  122 (459)
T PRK08323         45 KYVMPGGIDPHTHMEMPFGGTVSSDDFETGTRAAACGGTTTIIDFALQPKGQSLREALEAWHGKAAGKAV--IDYGFHMI  122 (459)
T ss_pred             CEEeccEEeeeeccccccCCccccCcHHHHHHHHHhCCCCEEEeCcCCCCCCChHHHHHHHHHHhccCce--EEEEEEEE
Confidence            4799999999999986   245678887653     9999999999998877777777777665443333  89988766


Q ss_pred             EEeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC---------
Q 019093           74 LYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV---------  144 (346)
Q Consensus        74 ~~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~---------  144 (346)
                      +...+....+++.++.+.| +.+||+|+++..   .... +. +.+.++++.+++.|.++.+|+|+.+.+.         
T Consensus       123 ~~~~~~~~~~~~~~~~~~g-~~~ik~~~~~~~---~~~~-s~-~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~~~~~  196 (459)
T PRK08323        123 ITDWNEVVLDEMPELVEEG-ITSFKLFMAYKG---ALML-DD-DELLRALQRAAELGALPMVHAENGDAIAYLQAKLLAE  196 (459)
T ss_pred             ecCCcHHHHHHHHHHHHcC-CCEEEEEEecCC---CCCC-CH-HHHHHHHHHHHhcCCEEEEEcCChHHHHHHHHHHHHc
Confidence            5211221245777777888 689999986421   1223 34 7899999999999999999999865421         


Q ss_pred             C-----------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccC
Q 019093          145 D-----------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQG  211 (346)
Q Consensus       145 ~-----------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~  211 (346)
                      +           +..+|..++.+++  .+++.+|+|+||+|+|+++++++|+.+|  |.+||||+|||||+|++++++..
T Consensus       197 g~~~~~~~~~~~p~~~e~~~v~~~~--~~a~~~~~~~~i~H~s~~~~~~~i~~ak~~g~~vt~e~~p~~l~l~~~~~~~~  274 (459)
T PRK08323        197 GKTGPEYHALSRPPEVEGEATNRAI--MLAELAGAPLYIVHVSCKEALEAIRRARARGQRVFGETCPQYLLLDESEYDGP  274 (459)
T ss_pred             CCCChhhhhccCCHHHHHHHHHHHH--HHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCeEEEEcCccceeecHHHhcCC
Confidence            1           2356888999999  8999999999999999999999999887  78999999999999999998643


Q ss_pred             C--CCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCcccccc----CC--CCCCccchhHHHHHHHHHHHh-
Q 019093          212 G--LRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKEC----AC--GCAGIYNAPVALSLYAKVFEE-  282 (346)
Q Consensus       212 ~--~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~----~~--~~~G~~g~e~~lp~l~~~~~~-  282 (346)
                      +  +|..+|+|||||+++|+++||++|++|.||+ |+|||+||+.++|..    +|  .++|++|+|+.+|++++..+. 
T Consensus       275 ~~~~g~~~k~~pPlr~~~~~~~l~~~l~~G~i~~-i~sDh~p~~~~~~~~~~~~~~~~~p~G~~~~e~~~~~l~~~~~~~  353 (459)
T PRK08323        275 DWFEGAKYVMSPPLRDKEHQDALWRGLQDGDLQV-VATDHCPFCFEQKKQLGRGDFTKIPNGTPGVEDRMPLLFSEGVMT  353 (459)
T ss_pred             ccccccceEECCCCCChHHHHHHHHHhhcCCeeE-EECCCCCCChHHhcccccCCHhhCCCCcchHhhhHHHHHHHHHHc
Confidence            2  3688999999999999999999999999999 999999999888753    33  245999999999999854333 


Q ss_pred             -cCCHHHHHHHHchhhhhhcCC-CCC-------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093          283 -MGALDKLEAFTSFNGPDFYGL-PRN-------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI  346 (346)
Q Consensus       283 -~~~l~~lv~~~s~nPAki~gl-~~k-------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~  346 (346)
                       ..+++++++++|.||||+||| +++       +|||+|||  ++|+|+.++++|+++|||| +|++++|+|.++
T Consensus       354 ~~~~~~~~~~~~t~~pA~~lgl~~~~G~l~~G~~ADlvi~d~~~~~~v~~~~~~s~~~~s~~-~g~~~~g~v~~v  427 (459)
T PRK08323        354 GRITLNRFVELTSTNPAKIFGLYPRKGTIAVGADADIVIWDPNATKTISASTLHSNVDYNPY-EGFEVTGWPVTT  427 (459)
T ss_pred             CCCCHHHHHHHHhhHHHHHhCCCCCCcccCCCCcCCEEEEcCCcccccCHHHHhhcCCCCcc-cCcEEeeeEEEE
Confidence             358999999999999999999 442       89999999  8899999999999999999 799999998763

>TIGR02033 D-hydantoinase D-hydantoinase

Probab=100.00  E-value=4.8e-58  Score=456.56  Aligned_cols=333  Identities=19%  Similarity=0.172  Sum_probs=268.8

Q ss_pred             eEEecCccccceecCC---CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD---GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMT   73 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~---g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~   73 (346)
                      ++||||+||+|+|++.   +..++|++.+++     |||||+++||++.|+.+..+.++...+.....+.  +||+++..
T Consensus        47 ~~vlPGlID~H~H~~~~~~~~~~~e~~~~~s~~a~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  124 (454)
T TIGR02033        47 KYVMPGGIDVHTHLEMPFGGTVTADDFFTGTKAAAAGGTTTIIDFALPHKGESLTEALETWHEKAEGKSV--IDYGFHMM  124 (454)
T ss_pred             CEEecCEecceeccCcccCCCCCcchHHHHHHHHHhCCCCEEEeCcCCCCCCCHHHHHHHHHHHhccCce--EEEEEEec
Confidence            4799999999999986   256678886654     9999999999998877778877777665433332  78887765


Q ss_pred             EEeCCCCCHHH-HHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC--------
Q 019093           74 LYLTDTTSPDE-IKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV--------  144 (346)
Q Consensus        74 ~~~~~~~~~~e-l~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~--------  144 (346)
                      .........++ +..+.+.| +.++|+|+++.   ....+ +. +.++++++++++.|.++.+|+|+.....        
T Consensus       125 ~~~~~~~~~~~~~~~~~~~g-~~~ik~~~~~~---~~~~~-~~-~~l~~~~~~a~~~~~~v~~H~E~~~~~~~~~~~~~~  198 (454)
T TIGR02033       125 ITHWNDEVLEEHIPELVEEG-ITSFKVFMAYK---NLLMV-DD-EELFEILKRAKELGALLQVHAENGDVIAELQARLLA  198 (454)
T ss_pred             ccCCcHHHHHHHHHHHHhcC-CcEEEEEeecC---CCCCC-CH-HHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHHHHH
Confidence            31111111334 44555677 68999998542   11223 44 7899999999999999999999865321        


Q ss_pred             -C-----------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhcc
Q 019093          145 -D-----------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQ  210 (346)
Q Consensus       145 -~-----------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~  210 (346)
                       +           +..+|..++.+.+  .+++++|+|+||+|+|++++++.|+.+|  |.+|+||+|||||+||.+++..
T Consensus       199 ~G~~~~~~~~~~~p~~~e~~~v~~~~--~~~~~~~~~~~i~H~s~~~~~~~i~~~~~~g~~vt~e~~p~~l~~~~~~~~~  276 (454)
T TIGR02033       199 QGKTGPEYHALSRPPESEAEAVARAI--ALAALANAPLYVVHVSTASAVDEIAEAREKGQPVYGETCPQYLLLDDTIYDK  276 (454)
T ss_pred             cCCCChhHhhhcCCHHHHHHHHHHHH--HHHHHhCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEcCchheeecHHHhcC
Confidence             1           1346788898888  7999999999999999999999998776  7899999999999999999863


Q ss_pred             CC-CCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCcccc----ccCCC--CCCccchhHHHHHHHHHHHhc
Q 019093          211 GG-LRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRK----ECACG--CAGIYNAPVALSLYAKVFEEM  283 (346)
Q Consensus       211 ~~-~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K----~~~~~--~~G~~g~e~~lp~l~~~~~~~  283 (346)
                      .+ .++.+|||||||+++||++||++|.+|.||+ |||||+||+.++|    ..+|.  .+|++|+|+.+|++|+.++++
T Consensus       277 ~~~~~~~~~~~pPlr~~~~~~~l~~~l~~G~i~~-igtDh~p~~~~~k~~~~~~~~~~~~~G~~g~e~~l~~l~~~~v~~  355 (454)
T TIGR02033       277 PGFEGAKYVCSPPLREKEDQDALWSALSSGALQT-VGSDHCPFNFAQKKAIGKDDFTKIPNGGPGVEERMTLLFDEGVAT  355 (454)
T ss_pred             cccccceeEECCCCCChhhHHHHHHHhhcCCeEE-EECCCCCCCHHHhhhcccCCHhhCCCCCchHHhHHHHHHHHHHHc
Confidence            21 3578999999999999999999999999999 9999999998887    23443  359999999999999765543


Q ss_pred             --CCHHHHHHHHchhhhhhcCC-CCC-------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093          284 --GALDKLEAFTSFNGPDFYGL-PRN-------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI  346 (346)
Q Consensus       284 --~~l~~lv~~~s~nPAki~gl-~~k-------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~  346 (346)
                        .+++++++++|.||||+||| +++       +|||+|||  .+|+++.++++|+++|||| +|++++|+|.++
T Consensus       356 ~~~~~~~~~~~~t~~pa~~~gl~~~~G~l~~G~~AD~~i~d~~~~~~~~~~~~~~~~~~~p~-~g~~~~g~v~~t  429 (454)
T TIGR02033       356 GRITLEKFVELTSTNPAKIFNMYPRKGTIAVGSDADIVIWDPNRTTVISAETHHDNADYNPF-EGFKVQGAVVSV  429 (454)
T ss_pred             CCCCHHHHHHHHhhHHHHHcCCCCCCCccccCCcCCEEEEcCCcCeeechHHhhccCCCCcc-cCeEEeeeEEEE
Confidence              48999999999999999999 442       89999999  8999999999999999999 699999999764

This model represents the D-hydantoinase (dihydropyrimidinase) which primarily converts 5,6-dihydrouracil to 3-ureidopropanoate but also acts on dihydrothymine and hydantoin. The enzyme is a metalloenzyme.

>COG0418 PyrC Dihydroorotase [Nucleotide transport and metabolism]

Probab=100.00  E-value=4.1e-51  Score=369.26  Aligned_cols=342  Identities=63%  Similarity=1.047  Sum_probs=313.7

Q ss_pred             CeEEecCccccceecCCCccccccccccCCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCC
Q 019093            1 MELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTT   80 (346)
Q Consensus         1 ~~~vlPG~ID~HvH~r~g~~~ke~~~s~sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~   80 (346)
                      |++.+....|.|+|+|+|..-+......+.++...+.|||..||+++.+...+|++|+.++.+..-+|.+.|+++++++.
T Consensus         3 ~~l~i~rPdDwHlHLRdg~mL~~V~p~ts~~f~rAiIMPNL~pPvtt~~~a~aYr~rIl~a~p~~~~F~PLMtlYLtd~~   82 (344)
T COG0418           3 QELTIRRPDDWHLHLRDGAMLKAVVPYTSRGFGRAIIMPNLVPPVTTVADALAYRERILKAVPAGHRFTPLMTLYLTDST   82 (344)
T ss_pred             eeeeccCccceeEEecCccHHHHhhhhhhhhcceEEEcCCCCCCcccHHHHHHHHHHHHHhCcCCCCCceeEEEEecCCC
Confidence            57889999999999999888777776667899999999999999999999999999998876644689999999999888


Q ss_pred             CHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHH
Q 019093           81 SPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQP  160 (346)
Q Consensus        81 ~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~  160 (346)
                      .++|+.+..+.|.|.++|+||++.++||+.|+.|. +.++.+|+.+++.|++++||.|-.+...++.++|+..+.+++++
T Consensus        83 ~peel~~a~~~g~i~a~KlYPaGaTTNS~~GV~~~-~~~~pvle~Mq~~gmpLlvHGEvt~~~vDifdrE~~Fi~~vl~p  161 (344)
T COG0418          83 TPEELEEAKAKGVIRAVKLYPAGATTNSDSGVTDI-EKIYPVLEAMQKIGMPLLVHGEVTDAEVDIFDREAAFIESVLEP  161 (344)
T ss_pred             CHHHHHHHHhcCcEEEEEeccCCccccCcCCcCcH-HHHHHHHHHHHHcCCeEEEecccCCccccchhhHHHHHHHHHHH
Confidence            99999999999989999999999999999999987 89999999999999999999998877778889999999999988


Q ss_pred             HHHhCCCCcEEEEccCCHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCC
Q 019093          161 LIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGS  240 (346)
Q Consensus       161 ~la~~~g~~lhi~HvSt~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~  240 (346)
                      ...+++..|+.+.|++|+++++.|+++. .++.+.+|||||++|.+++..+|..+.+.|-|=++.++||+||.++..+|.
T Consensus       162 l~~~fP~LKIV~EHiTT~dav~~v~~~~-~nlaATIT~hHL~~nrnd~l~Ggi~Ph~fClPilKr~~hr~AL~~aa~sg~  240 (344)
T COG0418         162 LRQRFPKLKIVLEHITTKDAVEYVKDAN-NNLAATITPHHLLLNRNDMLVGGIRPHLFCLPILKRETHREALREAATSGH  240 (344)
T ss_pred             HHhhCCcceEEEEEeccHHHHHHHHhcC-cceeeEeehhheeeehhhhhcCCCCcceeeeccccchhhHHHHHHHHhcCC
Confidence            8889999999999999999999999874 569999999999999999987666799999999999999999999999999


Q ss_pred             ccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHchhhhhhcCCCCCCccEEEEecceeec
Q 019093          241 RKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLPRNTSKIKLTKIPWKVP  320 (346)
Q Consensus       241 Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~~~~l~~lv~~~s~nPAki~gl~~kdAdlvi~d~~~~v~  320 (346)
                      -.+|+|||.|||....|+..++.+|+.+....+|++.+++++.+.|+.|-.++|.|..++||||..+.-++++.++|.|.
T Consensus       241 ~kfFlGtDSAPH~~~~Ke~~cgcAG~fsap~al~~~AevFE~~naL~~LeaF~S~nGp~fY~lp~n~~~itL~k~~~~vP  320 (344)
T COG0418         241 PKFFLGTDSAPHARSRKESACGCAGIFSAPFALPLYAEVFEEENALDNLEAFASDNGPKFYGLPRNDKTITLVKEEWQVP  320 (344)
T ss_pred             CcEEecCCCCCCcccccccccccccccccHhHHHHHHHHHHHhcHHHHHHHHHhhcCcceecccCCCceEEEEecccccc
Confidence            99999999999999999887888999999999999999999999999999999999999999987677788999999998


Q ss_pred             CCccccCCcccccCCCcEEEEEEE
Q 019093          321 EAFSFSFGDIIPMFAGNTLEWQPS  344 (346)
Q Consensus       321 ~~~~~s~~~~sp~~~G~~l~G~v~  344 (346)
                      ++--.......||..|.+++|.+.
T Consensus       321 ~~i~~g~~~vvpf~aGe~L~W~v~  344 (344)
T COG0418         321 ESIPFGDDIVVPFRAGETLSWSVK  344 (344)
T ss_pred             ceeccCCCceEEecCCCeeeeeeC
Confidence            876666667899999999999873

>KOG2902 consensus Dihydroorotase [Nucleotide transport and metabolism]

Probab=100.00  E-value=7.7e-43  Score=306.09  Aligned_cols=337  Identities=66%  Similarity=1.059  Sum_probs=292.0

Q ss_pred             CeEEecCccccceecCCCccccccc-cccCCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCC
Q 019093            1 MELTLTQPDDWHLHLRDGDLLKAVV-PHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDT   79 (346)
Q Consensus         1 ~~~vlPG~ID~HvH~r~g~~~ke~~-~s~sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~   79 (346)
                      |++-+|+.-|+|||+|+|.+-+.-. .+.+||+.....|||..||+++.++.-.|++.+.+-..   .-.+.+++++++.
T Consensus         3 mel~i~~~~DmHvHlR~g~ml~aVvP~~a~ggvs~AyvMPNL~PPiTt~da~i~YkK~i~kL~s---kttfLMslYLs~~   79 (344)
T KOG2902|consen    3 MELTITQPDDMHVHLRDGDMLHAVVPHSASGGVSRAYVMPNLKPPITTTDAAIIYKKFIMKLPS---KTTFLMSLYLSDK   79 (344)
T ss_pred             eEEecCCccceeEEeccCCeeeeeccccccCceeEEEEcCCCCCCcchHHHHHHHHHHHHhcCc---cceeEEEEeecCC
Confidence            7899999999999999976665433 34679999999999999999998876667766655332   2344778888887


Q ss_pred             CCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCC-hhhhHHHHHHHHH
Q 019093           80 TSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVD-IFDREKVFIDTIL  158 (346)
Q Consensus        80 ~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~-~~~~E~~av~~~l  158 (346)
                      ..+++|.+..+.|+|.|+|+|+++.++++..|++++++..|.+|+.+++.|+++-+|-|-+..+.+ ...+|...+-.++
T Consensus        80 ttPe~I~eAa~~~~irgVK~YPaGaTTNS~~GV~~~f~~fyPvf~aMqe~nm~LnvHGEvpps~D~~Vf~aE~~Flptll  159 (344)
T KOG2902|consen   80 TTPEEIREAAESGVIRGVKLYPAGATTNSQDGVTDLFGKFYPVFEAMQEQNMPLNVHGEVPPSIDGHVFDAEKIFLPTLL  159 (344)
T ss_pred             CCHHHHHHHHHhCceeeEEeccCcccccccccccccchhhhHHHHHHHHcCceEEecCCCCCccCCceecchhhhHHHHH
Confidence            788999999999889999999999999999999885589999999999999999999997654433 4678888887777


Q ss_pred             HHHHHhCCCCcEEEEccCCHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHc
Q 019093          159 QPLIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTS  238 (346)
Q Consensus       159 ~~~la~~~g~~lhi~HvSt~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~  238 (346)
                      . ...++++.++.+.|++|.++++.++.+++..|-+.+++|||+|+.+++..   ++...|.|-.+.+.||+||.+|..+
T Consensus       160 ~-LhqrfP~LKivlEHcTt~dAv~~ve~a~~~sVaaTvTahHL~Lt~~dwqg---~P~nfCkPVaK~e~dr~AlvkAatS  235 (344)
T KOG2902|consen  160 Q-LHQRFPQLKIVLEHCTTMDAVNFVESAKEGSVAATVTAHHLLLTRNDWQG---QPHNFCKPVAKREIDREALVKAATS  235 (344)
T ss_pred             H-HHHhCccceeHHHhcccHHHHHHHHhhcCCceeeEeehheeEEehhhhcC---CCcccccccccCcccHHHHHHHHhc
Confidence            5 67899999999999999999999999998889999999999999999863   4889999999999999999999999


Q ss_pred             CCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHchhhhhhcCCC--CCCccEEEEecc
Q 019093          239 GSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLP--RNTSKIKLTKIP  316 (346)
Q Consensus       239 G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~~~~l~~lv~~~s~nPAki~gl~--~kdAdlvi~d~~  316 (346)
                      |.--+|+|||.|||.+..|....+.+|+.+..+.+|++.+++.+.+.|+.|-.+.|.+.-++||+|  ++..+|++-+++
T Consensus       236 g~pkFFfGsDSAPHprs~K~~~~~cAGvysqpfA~sy~A~VFde~gaLd~Lk~F~s~fG~~FY~~p~e~~sS~I~lKKe~  315 (344)
T KOG2902|consen  236 GSPKFFFGSDSAPHPRSRKESSCGCAGVYSQPFALSYYAKVFDEAGALDKLKAFTSFFGPDFYGLPDERNSSKITLKKEP  315 (344)
T ss_pred             CCCceeecCCCCCCcccccccCCCcceeecccchHHHHHHHHhhhchHHHHhhhHhhcCcceecccccccccceeeecCc
Confidence            999999999999999999987667789999999999999999999999999999999999999996  445676666699


Q ss_pred             eeecCCccccCCcccccCCCcEEEEEEE
Q 019093          317 WKVPEAFSFSFGDIIPMFAGNTLEWQPS  344 (346)
Q Consensus       317 ~~v~~~~~~s~~~~sp~~~G~~l~G~v~  344 (346)
                      |+|++-.-..+....||..|.+|+|.+.
T Consensus       316 ~~vP~v~~~~~~~ivPf~age~LqW~~~  343 (344)
T KOG2902|consen  316 WKVPDVFNFPFGEIVPFFAGETLQWQPL  343 (344)
T ss_pred             ccCcchhcCCCCceeeecCCCeeeeeeC
Confidence            9998766566778889889999999874

>PRK09061 D-glutamate deacylase; Validated

Probab=100.00  E-value=8.6e-41  Score=336.24  Aligned_cols=305  Identities=10%  Similarity=0.025  Sum_probs=228.9

Q ss_pred             eEEecCccccceecCC-CccccccccccCCceeEEEeC-CCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE----
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSVSHYGRAIVM-PNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLY----   75 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~sGGvTtvv~m-Pnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~----   75 (346)
                      ++|+||+||+|+|+++ +.    .-....|||||+++| +++.|.   .    .+.+...+.. ..+||+++++..    
T Consensus        67 ~~v~PG~ID~H~H~~~~~~----~~~~~~~GvTtvv~~~~~~~p~---~----~~~~~~~~~~-~~vn~~~~~~~~~~R~  134 (509)
T PRK09061         67 LVVAPGFIDLHAHGQSVAA----YRMQAFDGVTTALELEAGVLPV---A----RWYAEQAGEG-RPLNYGASVGWTPARI  134 (509)
T ss_pred             CEEecCeEeeeeCCCCCcc----chhhccCCceeEEeeccCCCCH---H----HHHHHHHhcC-CcceeehhcCcHHHHH
Confidence            4799999999999876 31    223346999999999 444432   1    2222222222 127898877652    


Q ss_pred             -eCCC------------------C-----CHHH---HHHHHH----cCCeeEEEEeecCCccCCCCCccChHHHHHHHHH
Q 019093           76 -LTDT------------------T-----SPDE---IKLARK----TGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLE  124 (346)
Q Consensus        76 -~~~~------------------~-----~~~e---l~~l~~----~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~  124 (346)
                       +..+                  .     ..+|   |.++.+    +| +.+||.++.|.     ... +. +.++++++
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~m~~ll~~al~~G-a~gis~~~~y~-----p~~-~~-~eL~~l~~  206 (509)
T PRK09061        135 AVLTGPQAEGTIADFGKALGDPRWQERAATPAELAEILELLEQGLDEG-ALGIGIGAGYA-----PGT-GH-KEYLELAR  206 (509)
T ss_pred             HHhCCcccccccccccccccccccccCCCCHHHHHHHHHHHHHHHHCC-CCEEecCCccC-----CCC-CH-HHHHHHHH
Confidence             0010                  0     1234   555543    78 68999876431     122 44 78999999


Q ss_pred             HhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCC------HHHHHHHHccC--CCeeEEEc
Q 019093          125 EMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITT------MDAVKFVESCK--EGFVAATV  196 (346)
Q Consensus       125 ~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt------~~~l~~i~~ak--g~~vt~Et  196 (346)
                      .++++|.++.+|+|+.++..  ..+|.+++.+++  .+++.+|+|+||+|+|+      ++++++|+++|  |.+||||+
T Consensus       207 ~A~~~g~~v~~H~e~~~~~~--~~~e~~av~~~i--~lA~~~G~rv~IsHlss~g~~~~~~~le~I~~Ar~~Gi~Vt~e~  282 (509)
T PRK09061        207 LAARAGVPTYTHVRYLSNVD--PRSSVDAYQELI--AAAAETGAHMHICHVNSTSLRDIDRCLALVEKAQAQGLDVTTEA  282 (509)
T ss_pred             HHHHcCCEEEEEecCcccCC--chhHHHHHHHHH--HHHHHhCCCEEEEeeccCCcccHHHHHHHHHHHHHcCCcEEEEe
Confidence            99999999999999976421  246778899999  89999999999999999      99999999998  89999999


Q ss_pred             cchh--------hccchhhhccCCCCCce---EE---eCCCCC-------------------------hhhHHHHHHHHH
Q 019093          197 TPQH--------LVLNRNALFQGGLRPHN---YC---LPVLKR-------------------------EIHRQAVVSAVT  237 (346)
Q Consensus       197 ~ph~--------L~l~~~~~~~~~~~~~~---k~---~PPLR~-------------------------~~d~~aL~~al~  237 (346)
                      ||||        |+|+++...+  ++..+   ++   +||||+                         ++++++||+++.
T Consensus       283 ~P~~~~~t~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~  360 (509)
T PRK09061        283 YPYGAGSTVVGAAFFDPGWLER--MGLGYGSLQWVETGERLLTREELAKLRANDPGGLVLIHFLDEDNPRDRALLDRSVL  360 (509)
T ss_pred             cCcchhhhhhcccccCHHHHHH--hCCCHHHheehhcccccCCHHHHHHHhccCCCCeEEEEeccCCCCccchhHHHHhC
Confidence            9999        9997777654  34555   88   999999                         678999999999


Q ss_pred             cCCccEEeecCCCCCCccccccCCCC--CCccchh------HHHHHHHHHHHh-c--CCHHHHHHHHchhhhhhcC----
Q 019093          238 SGSRKFFLGTDSAPHERGRKECACGC--AGIYNAP------VALSLYAKVFEE-M--GALDKLEAFTSFNGPDFYG----  302 (346)
Q Consensus       238 ~G~Id~~i~SDHaP~~~~~K~~~~~~--~G~~g~e------~~lp~l~~~~~~-~--~~l~~lv~~~s~nPAki~g----  302 (346)
                      +|.| + |+|||+||+.++|...|..  .|+.|.+      ..+|.+++.+++ +  .+++++++++|.|||++||    
T Consensus       361 ~p~~-~-i~sD~~p~~~~~~~~~~~~~~~~~~~~~~h~r~~~~~~~~l~~~v~~~~~isl~~ai~~~T~~pA~~lg~~~~  438 (509)
T PRK09061        361 FPGA-A-IASDAMPWTWSDGTVYEGDAWPLPEDAVSHPRSAGTFARFLREYVRERKALSLLEAIRKCTLMPAQILEDSVP  438 (509)
T ss_pred             CCCc-e-EecCCccccccccccccccccccccCCCCCchhhcchHHHHHHHHhhcccCCHHHHHHHHHHHHHHHhccccc
Confidence            9999 8 9999999999999766654  4777777      788888775444 2  4899999999999999999    


Q ss_pred             -CC-CC------CccEEEEe-cceeecCCccccCCcccccCCCcE
Q 019093          303 -LP-RN------TSKIKLTK-IPWKVPEAFSFSFGDIIPMFAGNT  338 (346)
Q Consensus       303 -l~-~k------dAdlvi~d-~~~~v~~~~~~s~~~~sp~~~G~~  338 (346)
                       ++ ++      +|||+||| .. ..+...+++.  ++|| +|.+
T Consensus       439 ~l~~~G~i~~G~~ADlvv~D~~~-~~~~~~~~~~--~~~~-~gi~  479 (509)
T PRK09061        439 AMRRKGRLQAGADADIVVFDPET-ITDRATFEDP--NRPS-EGVR  479 (509)
T ss_pred             cccCCEeeCCCCCcCEEEEchhh-cccccccccc--CCCC-CCce
Confidence             74 32      89999999 44 4444445443  6788 5743

>cd01297 D-aminoacylase D-aminoacylases (N-acyl-D-Amino acid amidohydrolases) catalyze the hydrolysis of N-acyl-D-amino acids to produce the corresponding D-amino acids, which are used as intermediates in the synthesis of pesticides, bioactive peptides, and antibiotics

Probab=100.00  E-value=8.9e-38  Score=307.88  Aligned_cols=261  Identities=15%  Similarity=0.094  Sum_probs=191.8

Q ss_pred             eEEecCccccceecCC-CccccccccccCCceeEEEeCCC-CCCCCCcH------------------------HHHHHHH
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSVSHYGRAIVMPN-LKPPITTT------------------------AAAVAYR   55 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~sGGvTtvv~mPn-t~p~~~~~------------------------~~~~~~~   55 (346)
                      ++|+||+||+|+|++. +.....+-....||+||+++||+ +.|+.++.                        +.++.++
T Consensus        49 ~~v~PG~iD~H~H~~~~~~~~~~~~~a~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (415)
T cd01297          49 LVVAPGFIDVHTHYDGQVFWDPDLRPSSRQGVTTVVLGNCGVSPAPANPDDLARLIMLMEGLVALGEGLPWGWATFAEYL  128 (415)
T ss_pred             CEEccCEeeeeecCCcccccCcchhhHHhCcEEEEEeccccCccCCCChhhhhhhhhhhhcccccccccCCCCCCHHHHH
Confidence            4899999999999987 43322222234599999999998 55665544                        4556677


Q ss_pred             HHHHhhCCCCccEE---EEEEEEe-C------CC--CCHHHHHHHH----HcCCeeEEEEeecCCccCCCCCccChHHHH
Q 019093           56 ESILKALPASSNFT---PLMTLYL-T------DT--TSPDEIKLAR----KTGVVFAVKLYPAGATTNSQDGVTDLFGKC  119 (346)
Q Consensus        56 ~~~~~~~~~~vd~~---~~~~~~~-~------~~--~~~~el~~l~----~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l  119 (346)
                      +.+++.. ..+||.   +|+++.. .      +.  ...++|.+|.    ++| +.|||.++.|..   .... +. +.+
T Consensus       129 ~~~~~~~-~~~~~~~~~~h~~l~~~~~g~~~~~~~~~~~~~~~~l~~~al~~G-a~g~~~~~~y~~---~~~~-~~-~~l  201 (415)
T cd01297         129 DALEARP-PAVNVAALVGHAALRRAVMGLDAREATEEELAKMRELLREALEAG-ALGISTGLAYAP---RLYA-GT-AEL  201 (415)
T ss_pred             HHHHhcC-CCcCeeeccCcHHHHHHHhCcCCCCCCHHHHHHHHHHHHHHHHCC-CeEEEcccccCC---cccC-CH-HHH
Confidence            7664432 138998   7766521 0      00  1244566664    568 789999885521   1123 44 899


Q ss_pred             HHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHH---------HHHHHccC--
Q 019093          120 VHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDA---------VKFVESCK--  188 (346)
Q Consensus       120 ~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~---------l~~i~~ak--  188 (346)
                      +++|+.+++.|.++.+|||+.+      .+|.+++.+++  .+++.+|+|+||+|+|+.++         +++|+++|  
T Consensus       202 ~~~~~~a~~~g~~v~~H~e~~~------~~e~~av~~~~--~~a~~~g~r~~i~H~ss~~~~~~~~~~~~l~~i~~a~~~  273 (415)
T cd01297         202 VALARVAARYGGVYQTHVRYEG------DSILEALDELL--RLGRETGRPVHISHLKSAGAPNWGKIDRLLALIEAARAE  273 (415)
T ss_pred             HHHHHHHHHcCCEEEEEECccc------ccHHHHHHHHH--HHHHHhCCCEEEEEEecCCCcccchHHHHHHHHHHHHHh
Confidence            9999999999999999999875      47888999999  89999999999999999999         99999988  


Q ss_pred             CCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccc
Q 019093          189 EGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYN  268 (346)
Q Consensus       189 g~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g  268 (346)
                      |.+|++||||||+.+                      .++    |+++.++.+++ |+|||+|+.   |.    .+...|
T Consensus       274 G~~v~~e~~p~~~~~----------------------~~~----~~~l~~~~~~~-i~SDh~~~~---~~----~~~~~~  319 (415)
T cd01297         274 GLQVTADVYPYGAGS----------------------EDD----VRRIMAHPVVM-GGSDGGALG---KP----HPRSYG  319 (415)
T ss_pred             CCcEEEEeCCCCCCc----------------------HHH----HHHHHcCCCce-eeeCCCcCC---CC----CcchhC
Confidence            799999999998876                      233    34444448999 999999985   21    111222


Q ss_pred             hhHHHHHHHHHHH-hc--CCHHHHHHHHchhhhhhcCCC-CC------CccEEEEe
Q 019093          269 APVALSLYAKVFE-EM--GALDKLEAFTSFNGPDFYGLP-RN------TSKIKLTK  314 (346)
Q Consensus       269 ~e~~lp~l~~~~~-~~--~~l~~lv~~~s~nPAki~gl~-~k------dAdlvi~d  314 (346)
                      .   +|+++...+ ++  .+++++++++|.||||+||++ ++      +|||+|||
T Consensus       320 ~---~~~~l~~~~~~~~~~~~~~~~~~~t~~pA~~~gl~~~G~l~~G~~ADlvv~d  372 (415)
T cd01297         320 D---FTRVLGHYVRERKLLSLEEAVRKMTGLPARVFGLADRGRIAPGYRADIVVFD  372 (415)
T ss_pred             C---HHHHHHHHhcccCCCCHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEEc
Confidence            2   777765332 32  589999999999999999995 32      89999999

>TIGR02318 phosphono_phnM phosphonate metabolism protein PhnM

Probab=99.97  E-value=4.1e-30  Score=249.99  Aligned_cols=271  Identities=11%  Similarity=0.007  Sum_probs=187.3

Q ss_pred             eEEecCccccceecCC-Cc-----ccc---cccccc-----CCceeEEEeCC-CC--CCCCCcHHHHHHHH---HHHHhh
Q 019093            2 ELTLTQPDDWHLHLRD-GD-----LLK---AVVPHS-----VSHYGRAIVMP-NL--KPPITTTAAAVAYR---ESILKA   61 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~-----~~k---e~~~s~-----sGGvTtvv~mP-nt--~p~~~~~~~~~~~~---~~~~~~   61 (346)
                      ++|+||+||+|+|+.+ ..     ..+   +.|.++     +|||||+++|| +.  .|+..+.+.++.+.   +.++..
T Consensus        44 ~~v~PGlID~H~h~~e~~~~prp~~~~~~~~~~~~~~~~~aa~GiTT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (376)
T TIGR02318        44 DLLLPGLIDLHTDNLERHMSPRPGVDWPIDAAIVEHDKQLAAAGITTVFDALALGDTESGGRRPDNLRRMIDAISEARDR  123 (376)
T ss_pred             CEEeccEEEcccCccccCcCCCCCCCcchHHHHHHHHHHHhhCCcceEEeeEEecccCCcCccHHHHHHHHHHHHHhhhc
Confidence            5899999999999876 11     123   556554     39999999999 43  57777888888888   433322


Q ss_pred             CCCCccEEEEEEEEe-CCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCC
Q 019093           62 LPASSNFTPLMTLYL-TDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVT  140 (346)
Q Consensus        62 ~~~~vd~~~~~~~~~-~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~  140 (346)
                      ....+||.+|+.+.. .+ .+.+++..+.+.| +.+||.||...  .+.+...+. ..+++.+..  +.|   ++|||+.
T Consensus       124 ~~~~~d~~~h~~~e~~~~-~~~~~l~~~~~~g-~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~--~~g---~~~~e~~  193 (376)
T TIGR02318       124 GLLRADHRLHLRCELPNE-EVLPELEELIDDP-RVDLISLMDHT--PGQRQFRDL-EKYREYYRG--KRG---LSDDEFD  193 (376)
T ss_pred             CchhhhceeEEEEEecCc-cHHHHHHHHhcCC-CcCEEEEeCCC--CCcccccCH-HHHHHHHHh--hcC---CCHHHHH
Confidence            112289999999742 34 3678999998889 88999999752  233334454 566666644  566   7799997


Q ss_pred             CCCCChh----hhHHHHHHHHHHHHHHhCCCCcEEEEcc-CCHHHHHHHHccCCC-----eeEEEccchhhccchhhhcc
Q 019093          141 DPIVDIF----DREKVFIDTILQPLIQRLPQLKVVMEHI-TTMDAVKFVESCKEG-----FVAATVTPQHLVLNRNALFQ  210 (346)
Q Consensus       141 ~~~~~~~----~~E~~av~~~l~~~la~~~g~~lhi~Hv-St~~~l~~i~~akg~-----~vt~Et~ph~L~l~~~~~~~  210 (346)
                      +++....    ....+++.+++  .+|+..|+|+ ..|. .+.+.++..++. |.     +++.|+        .+....
T Consensus       194 ~~~~~~~~~~~~~~~e~i~~~v--~~A~~~G~~v-~sH~~~~~e~i~~a~~~-Gv~~~E~~~t~e~--------a~~~~~  261 (376)
T TIGR02318       194 EIVEERIARRAEYGLANRSEIA--ALARARGIPL-ASHDDDTPEHVAEAHDL-GVTISEFPTTLEA--------AKEARS  261 (376)
T ss_pred             HHHHHHHHHHhhccHHHHHHHH--HHHHHCCCeE-EEecCCCHHHHHHHHHC-CCChhccCCCHHH--------HHHHHH
Confidence            7532110    01135677777  7899999997 7888 466665554443 54     333333        112222


Q ss_pred             CCCCCc-eEEeC-CCCChhh--HHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHh--cC
Q 019093          211 GGLRPH-NYCLP-VLKREIH--RQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEE--MG  284 (346)
Q Consensus       211 ~~~~~~-~k~~P-PLR~~~d--~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~--~~  284 (346)
                        .|.. .++.| |+|...+  +.++|+++.+|.+|+ ++|||.|++                  .++.++.....  ..
T Consensus       262 --~G~~v~~~~p~~~r~~~~~~~~~l~~~~~~G~~~~-l~SD~~p~~------------------~l~~~~~~~~~~~gl  320 (376)
T TIGR02318       262 --LGMQILMGAPNIVRGGSHSGNLSARELAHEGLLDV-LASDYVPAS------------------LLLAAFQLADDVEGI  320 (376)
T ss_pred             --cCCeEEECCccccccccccchHHHHHHHHCCCcEE-EEcCCCcHH------------------HHHHHHHHHHhhcCC
Confidence              2344 66778 8998776  889999999999999 999998841                  24444443332  34


Q ss_pred             CHHHHHHHHchhhhhhcCCCC-C------CccEEEEec
Q 019093          285 ALDKLEAFTSFNGPDFYGLPR-N------TSKIKLTKI  315 (346)
Q Consensus       285 ~l~~lv~~~s~nPAki~gl~~-k------dAdlvi~d~  315 (346)
                      +++++++++|.|||+++|++. +      +|||+++|.
T Consensus       321 ~~~~al~~~T~npA~~lgl~~~G~I~~G~~ADlvvvd~  358 (376)
T TIGR02318       321 PLPQAVKMVTKNPARAVGLSDRGSIAPGKRADLVRVHR  358 (376)
T ss_pred             CHHHHHHHHhHHHHHHcCCCCCCcCCCCCcccEEEEcC
Confidence            899999999999999999953 2      899999994

This family consists of proteins from in the PhnM family. PhnM is a a protein associated with phosphonate utilization in a number of bacterial species. In Pseudomonas stutzeri WM88, a protein that is part of a system for the oxidation of phosphites (another form of reduced phosphorous compound) scores between trusted and noise cutoffs.

>PRK15446 phosphonate metabolism protein PhnM; Provisional

Probab=99.96  E-value=2.4e-29  Score=245.28  Aligned_cols=274  Identities=12%  Similarity=-0.004  Sum_probs=179.2

Q ss_pred             eEEecCccccceecCC-----C-c---cccccccccC-----CceeEEEeCC-CCC-CC-----CCcHHHHHHHHHHHHh
Q 019093            2 ELTLTQPDDWHLHLRD-----G-D---LLKAVVPHSV-----SHYGRAIVMP-NLK-PP-----ITTTAAAVAYRESILK   60 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-----g-~---~~ke~~~s~s-----GGvTtvv~mP-nt~-p~-----~~~~~~~~~~~~~~~~   60 (346)
                      ++||||+||.|+|.-+     + .   ..+++|.+++     ||+||++||+ ++. |+     .+..+.+..+.+....
T Consensus        48 ~~v~PG~ID~H~h~~~~~~~p~~~~~~~~~~~~~~~~~~a~~gG~Tt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (383)
T PRK15446         48 DYLLPGLVDLHTDNLEKHLAPRPGVDWPADAALAAHDAQLAAAGITTVFDALSVGDEEDGGLRSRDLARKLIDAIEEARA  127 (383)
T ss_pred             CEEEeCeEEcccCCcccccCCCCCCccchHHHHHHHHHHHHhCCccEeeeeeEeccCCCCCcccHHHHHHHHHHHHHhhh
Confidence            5899999999995432     1 1   2237787764     9999999985 543 42     2222234445542111


Q ss_pred             hCCCCccEEEEEEEEe-CCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCC
Q 019093           61 ALPASSNFTPLMTLYL-TDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEV  139 (346)
Q Consensus        61 ~~~~~vd~~~~~~~~~-~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~  139 (346)
                      ...+.|||++|+.+.. ++ ...+||.++.+.| +++||+||.......+  ..+. .. ++.+. .++.|   ++|||+
T Consensus       128 ~~~~~vD~~~h~~~~~~~~-~~~~~l~~~~~~g-~~~~k~fm~~~p~~~~--~~~~-~~-~~~~~-~~~~g---~~~~e~  197 (383)
T PRK15446        128 RGLLRADHRLHLRCELTNP-DALELFEALLAHP-RVDLVSLMDHTPGQRQ--FRDL-EK-YREYY-AGKYG---LSDEEF  197 (383)
T ss_pred             cCchhccceeEEEEEecCc-chHHHHHHHhcCC-CcCEEEEeCCCCcccc--ccCH-HH-HHHHH-HhhcC---CCHHHH
Confidence            1222399999999843 33 3578999999889 8999999975211111  2232 33 44454 55777   679999


Q ss_pred             CCCCCC----hhhhHHHHHHHHHHHHHHhCCCCcEEEEcc-CCHHHHHHHHccCCCeeEEEccchhhccchhhh---ccC
Q 019093          140 TDPIVD----IFDREKVFIDTILQPLIQRLPQLKVVMEHI-TTMDAVKFVESCKEGFVAATVTPQHLVLNRNAL---FQG  211 (346)
Q Consensus       140 ~~~~~~----~~~~E~~av~~~l~~~la~~~g~~lhi~Hv-St~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~---~~~  211 (346)
                      .+++..    ....|.+++++++  .+|+..|+++ ..|. .+.+.++..++. |+.++ |   |  ..+.+.+   .+.
T Consensus       198 ~~~~~~~~~~~~~~~~e~i~~~v--~~A~~~g~~v-~sH~~~~~~~i~~a~~~-Gv~~~-e---~--~~~~e~~~~~~~~  267 (383)
T PRK15446        198 DAFVEERIALSARYAPPNRRAIA--ALARARGIPL-ASHDDDTPEHVAEAHAL-GVAIA-E---F--PTTLEAARAARAL  267 (383)
T ss_pred             HHHHHHHHHhHhhcCHHHHHHHH--HHHHHCCCce-eecCCCCHHHHHHHHHc-CCcee-e---C--CCcHHHHHHHHHC
Confidence            876421    1234566788888  7999999998 7888 577766555543 66654 3   1  1222222   111


Q ss_pred             CCCCceEEeC-CCCC--hhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHh-cCCHH
Q 019093          212 GLRPHNYCLP-VLKR--EIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEE-MGALD  287 (346)
Q Consensus       212 ~~~~~~k~~P-PLR~--~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~-~~~l~  287 (346)
                      | ....++.| |+|.  ...+..+|+++..|.+++ ++|||.|++                  .++.++..... ..+++
T Consensus       268 g-~~v~~~~p~~~r~~~~~~~~~~~~~~~~Gv~~~-lgSD~~p~~------------------~~~~~~~~~~~~gls~~  327 (383)
T PRK15446        268 G-MSVLMGAPNVVRGGSHSGNVSALDLAAAGLLDI-LSSDYYPAS------------------LLDAAFRLADDGGLDLP  327 (383)
T ss_pred             C-CEEEeCCcccccCCcccchHhHHHHHHCCCcEE-EEcCCChhh------------------HHHHHHHHHHhcCCCHH
Confidence            2 12333445 5776  567889999999999999 999998753                  23333333333 35899


Q ss_pred             HHHHHHchhhhhhcCCCC-C------CccEEEEec
Q 019093          288 KLEAFTSFNGPDFYGLPR-N------TSKIKLTKI  315 (346)
Q Consensus       288 ~lv~~~s~nPAki~gl~~-k------dAdlvi~d~  315 (346)
                      +++++.+.|||+++|++. +      +|||+|+|.
T Consensus       328 ~al~~~T~npA~~lgl~~~G~I~~G~~ADlvv~d~  362 (383)
T PRK15446        328 QAVALVTANPARAAGLDDRGEIAPGKRADLVRVRR  362 (383)
T ss_pred             HHHHHHhHHHHHHcCCCCCcCcCCCCcCCEEEEcC
Confidence            999999999999999943 2      899999993

>cd01308 Isoaspartyl-dipeptidase Isoaspartyl dipeptidase hydrolyzes the beta-L-isoaspartyl linkages in dipeptides, as part of the degradative pathway to eliminate proteins with beta-L-isoaspartyl peptide bonds, bonds whereby the beta-group of an aspartate forms the peptide link with the amino group of the following amino acid

Probab=99.88  E-value=2.5e-21  Score=189.17  Aligned_cols=165  Identities=13%  Similarity=0.060  Sum_probs=102.1

Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEcc--C-CHHHHHHHHccC---CCeeEEEccchhhccchhhhcc----CCCCC---
Q 019093          149 REKVFIDTILQPLIQRLPQLKVVMEHI--T-TMDAVKFVESCK---EGFVAATVTPQHLVLNRNALFQ----GGLRP---  215 (346)
Q Consensus       149 ~E~~av~~~l~~~la~~~g~~lhi~Hv--S-t~~~l~~i~~ak---g~~vt~Et~ph~L~l~~~~~~~----~~~~~---  215 (346)
                      .|..++.+.+  .+++..+++.|+.|+  + +..+++.+.+.+   |.+++ |+||||+.++.++++.    ...|.   
T Consensus       169 ~~~~~~~~~a--~~~~~~~~~~~~~~vh~~~~~~~~~~i~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~G~~v~  245 (387)
T cd01308         169 EELARIAAEA--RVGGLLGGKAGIVHIHLGDGKRALSPIFELIEETEIPIT-QFLPTHINRTAPLFEQGVEFAKMGGTID  245 (387)
T ss_pred             HHHHHHHHHH--HHHHHhcCCCcEEEEEeCCchHHHHHHHHHHHhcCCCcc-eeECCcccCCHHHHHHHHHHHHcCCcEE
Confidence            3444444444  334434555444443  3 336666664432   56677 7777777777664211    00011   


Q ss_pred             -ceEEeCCCCChh---hHHHHHHHHHcCCc-c--EEeecCCC---CCCccccccCCCCCCccchhHHHHHHHHHHHhc-C
Q 019093          216 -HNYCLPVLKREI---HRQAVVSAVTSGSR-K--FFLGTDSA---PHERGRKECACGCAGIYNAPVALSLYAKVFEEM-G  284 (346)
Q Consensus       216 -~~k~~PPLR~~~---d~~aL~~al~~G~I-d--~~i~SDHa---P~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~~-~  284 (346)
                       ...++||+|+..   +++.||.++++|.. |  + ++|||+   |+..+++.  ....|+++++++++.+....... .
T Consensus       246 i~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~d~i~-l~TD~~~~~p~~~~~g~--~~~~g~~~~~~~~~~~~~~v~~~~i  322 (387)
T cd01308         246 LTSSIDPQFRKEGEVRPSEALKRLLEQGVPLERIT-FSSDGNGSLPKFDENGN--LVGLGVGSVDTLLREVREAVKCGDI  322 (387)
T ss_pred             EECCCCccccccCccChHHHHHHHHHhCCCCCcEE-EEECCCCCcccCccCCe--EEecCcCcHHHHHHHHHHHHHhCCC
Confidence             244556655432   46788899998863 2  6 899996   43322221  12358889999999887554444 5


Q ss_pred             CHHHHHHHHchhhhhhcCCC-CC------CccEEEEecceee
Q 019093          285 ALDKLEAFTSFNGPDFYGLP-RN------TSKIKLTKIPWKV  319 (346)
Q Consensus       285 ~l~~lv~~~s~nPAki~gl~-~k------dAdlvi~d~~~~v  319 (346)
                      ++++++++++.|||++||++ .+      +|||+|||..+.+
T Consensus       323 ~~~~al~~~T~npA~~lg~~~~G~i~~G~~ADlvv~d~~~~~  364 (387)
T cd01308         323 PLEVALRVITSNVARILKLRKKGEIQPGFDADLVILDKDLDI  364 (387)
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCcCCCCcCCEEEEcCCCCE
Confidence            99999999999999999985 22      8999999944433

Formation of this bond is a spontaneous nonenzymatic reaction in nature and can profoundly effect the function of the protein. Isoaspartyl dipeptidase is an octameric enzyme that contains a binuclear zinc center in the active site of each subunit and shows a strong preference of hydrolyzing Asp-Leu dipeptides.

>PRK10657 isoaspartyl dipeptidase; Provisional

Probab=99.87  E-value=1.1e-20  Score=184.71  Aligned_cols=164  Identities=13%  Similarity=0.042  Sum_probs=115.5

Q ss_pred             hHHHHHHHHHHHHHHhCCCCc--EEEEccC-CHHHHHHHHcc-C--CCeeEEEccchhhccchhhh------ccCCCCCc
Q 019093          149 REKVFIDTILQPLIQRLPQLK--VVMEHIT-TMDAVKFVESC-K--EGFVAATVTPQHLVLNRNAL------FQGGLRPH  216 (346)
Q Consensus       149 ~E~~av~~~l~~~la~~~g~~--lhi~HvS-t~~~l~~i~~a-k--g~~vt~Et~ph~L~l~~~~~------~~~~~~~~  216 (346)
                      .|..++.+..  ..++..+++  .+++|++ ++.+++.++++ +  |+.+++ +|+||+.++.+..      .+.|.-..
T Consensus       171 ~~l~~~~~~a--~~~~~~~g~~~~i~vH~~~~~~~l~~v~~~l~~~Gv~~~~-~~~~H~~~~~~~~~~~~~~~~~G~~~~  247 (388)
T PRK10657        171 EELARLAAEA--RVGGLLSGKAGIVHVHMGDGKKGLQPLFELLENTDIPISQ-FLPTHVNRNEPLFEQALEFAKKGGVID  247 (388)
T ss_pred             HHHHHHHHHH--HHHHHhcCCCCEEEEEeCCchHHHHHHHHHHHhcCCCcce-eeCcccCCCHHHHHHHHHHHHcCCeEE
Confidence            4444555555  344455543  8999999 79999998444 2  788885 9999999865541      22121011


Q ss_pred             eE-EeCCCCChhh---HHHHHHHHHcCC-cc--EEeecCCCCCCcc--ccccCCCCCCccchhHHHHHHHHHHHh-cCCH
Q 019093          217 NY-CLPVLKREIH---RQAVVSAVTSGS-RK--FFLGTDSAPHERG--RKECACGCAGIYNAPVALSLYAKVFEE-MGAL  286 (346)
Q Consensus       217 ~k-~~PPLR~~~d---~~aL~~al~~G~-Id--~~i~SDHaP~~~~--~K~~~~~~~G~~g~e~~lp~l~~~~~~-~~~l  286 (346)
                      +. ++||+|.+.+   .+.||+++++|. +|  + ++|||++....  +|. .+...|.++++.+++.+...... ..++
T Consensus       248 v~~~~~~~~~~~~~~~~~~l~~~~~~G~~~d~v~-l~tD~~~~~~~~~~~g-~~~~~g~~~~~~l~~~~~~~~~~~gis~  325 (388)
T PRK10657        248 LTTSDPDFLGEGEVAPAEALKRALEAGVPLSRVT-LSSDGNGSLPKFDEDG-NLVGLGVGSVESLLEEVRELVKDEGLPL  325 (388)
T ss_pred             EecCCCcccccCccCHHHHHHHHHHcCCChhheE-EECCCCCCCceeccCC-CEeccCcCchhhHHHHHHHHHHhcCCCH
Confidence            24 8999998744   489999999997 88  7 89999654321  121 11234888999999988766544 4599


Q ss_pred             HHHHHHHchhhhhhcCCCC-------CCccEEEEecce
Q 019093          287 DKLEAFTSFNGPDFYGLPR-------NTSKIKLTKIPW  317 (346)
Q Consensus       287 ~~lv~~~s~nPAki~gl~~-------kdAdlvi~d~~~  317 (346)
                      ++++++++.||||+||++.       ++||+++||.++
T Consensus       326 ~~~l~~aT~npA~~lg~~~~G~l~~G~~AD~vv~~~~~  363 (388)
T PRK10657        326 EDALKPLTSNVARFLKLNGKGEILPGKDADLLVLDDDL  363 (388)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCccCCCCccCEEEECCCC
Confidence            9999999999999999842       289999999444

>PRK12394 putative metallo-dependent hydrolase; Provisional

Probab=99.84  E-value=2.5e-19  Score=174.78  Aligned_cols=258  Identities=11%  Similarity=0.042  Sum_probs=145.3

Q ss_pred             eEEecCccccceecCC-Ccccc--ccccccCCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCC-CccEEEEEEEEe-
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLK--AVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPA-SSNFTPLMTLYL-   76 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~k--e~~~s~sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~-~vd~~~~~~~~~-   76 (346)
                      .+|+||+||+|+|+.. |....  .+.....+|+||++||++..  ..+.+.+.......++.... .+++.+++.... 
T Consensus        52 ~~v~PGliD~H~H~~~~g~~~~~~~~~~~l~~G~Ttv~d~g~~~--~~~~~~~~~~~~a~~~~gira~l~~~~~~~~~~~  129 (379)
T PRK12394         52 CIVTPGLIDYHAHVFYDGTEGGVRPDMYMPPNGVTTVVDAGSAG--TANFDAFYRTVICASKVRIKAFLTVSPPGQTWSG  129 (379)
T ss_pred             CEEECCEEEeeecCCCCCcccccCHHHHHHhCCccEEEECCCCC--cccHHHHHHHHhhhhcceeeeEEeeecccccccC
Confidence            4799999999999965 42221  11122349999999998543  23444444332212111010 134443321100 


Q ss_pred             -CC-----CCCHHHHHHHHHc--CCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhh
Q 019093           77 -TD-----TTSPDEIKLARKT--GVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFD  148 (346)
Q Consensus        77 -~~-----~~~~~el~~l~~~--G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~  148 (346)
                       .+     ....+++.++.+.  ..+.++|+++....  .. ...+  +.+.+.++.++++|+++.+|+++...      
T Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ki~~~~~~--~~-~~~~--~~l~~~~~~A~~~g~~v~iH~~e~~~------  198 (379)
T PRK12394        130 YQENYDPDNIDENKIHALFRQYRNVLQGLKLRVQTED--IA-EYGL--KPLTETLRIANDLRCPVAVHSTHPVL------  198 (379)
T ss_pred             cccccChhHCCHHHHHHHHHHCcCcEEEEEEEEeccc--cc-ccch--HHHHHHHHHHHHcCCCEEEEeCCCCc------
Confidence             00     0113566677542  33789999863211  01 1223  68999999999999999999998643      


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEc-------cCCHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeC
Q 019093          149 REKVFIDTILQPLIQRLPQLKVVMEH-------ITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLP  221 (346)
Q Consensus       149 ~E~~av~~~l~~~la~~~g~~lhi~H-------vSt~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~P  221 (346)
                       |   ..+++  .+.+....-.|..|       .+..+..+.+++++...++..+                      .+|
T Consensus       199 -~---~~~~~--~~l~~g~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~----------------------~~g  250 (379)
T PRK12394        199 -P---MKELV--SLLRRGDIIAHAFHGKGSTILTEEGAVLAEVRQARERGVIFDA----------------------ANG  250 (379)
T ss_pred             -c---HHHHH--HhcCCCCEEEecCCCCCCCcCCCCCCChHHHHHHHhCCeEEEe----------------------cCC
Confidence             1   12222  12111112233332       3333334444443311121111                      011


Q ss_pred             CCCChhhHHHHHHHHHcCC-ccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHhc-CCHHHHHHHHchhhhh
Q 019093          222 VLKREIHRQAVVSAVTSGS-RKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEM-GALDKLEAFTSFNGPD  299 (346)
Q Consensus       222 PLR~~~d~~aL~~al~~G~-Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~~-~~l~~lv~~~s~nPAk  299 (346)
                        |+..+.+.+|+++.+|. .++ |+|||+|...   ..+    .+    ..|+.++...... .++++++++.+.|||+
T Consensus       251 --~s~~~~~~~~~~l~~G~~~~~-lgTD~~~~~~---~~~----~~----~~l~~~~~~~~~~~~~~~~~~~~at~~~a~  316 (379)
T PRK12394        251 --RSHFDMNVARRAIANGFLPDI-ISSDLSTITK---LAW----PV----YSLPWVLSKYLALGMALEDVINACTHTPAV  316 (379)
T ss_pred             --ccccchHHHHHHHHCCCCceE-EECCCCCCCc---ccC----cc----chHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence              34446788999999996 788 8999999752   110    11    2345554433333 4899999999999999


Q ss_pred             hcCCC-CC-------CccEEEEe
Q 019093          300 FYGLP-RN-------TSKIKLTK  314 (346)
Q Consensus       300 i~gl~-~k-------dAdlvi~d  314 (346)
                      +||++ ++       +|||+++|
T Consensus       317 ~~g~~~~~G~i~~G~~ADl~~~~  339 (379)
T PRK12394        317 LMGMAAEIGTLAPGAFADIAIFK  339 (379)
T ss_pred             HhCCCCCCCccCCCCccCEEEEe
Confidence            99995 32       79999999

>cd01307 Met_dep_hydrolase_B Metallo-dependent hydrolases, subgroup B is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site

Probab=99.80  E-value=7.2e-18  Score=162.04  Aligned_cols=255  Identities=13%  Similarity=0.079  Sum_probs=138.6

Q ss_pred             eEEecCccccceecCC-Ccccccccc--ccCCceeEEEeCCCCCCCCCcHHHHHHHH-HHHHhhCCCCccEEEEEEEEeC
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVP--HSVSHYGRAIVMPNLKPPITTTAAAVAYR-ESILKALPASSNFTPLMTLYLT   77 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~--s~sGGvTtvv~mPnt~p~~~~~~~~~~~~-~~~~~~~~~~vd~~~~~~~~~~   77 (346)
                      ++|+||+||+|+|+++ |.+++++-.  ...||+||+++|||+.+  ++.+.+..+. ++....-.+.+||++++..  .
T Consensus        30 ~~v~PG~iD~H~H~~~~g~~~~~~~~~~a~~~GvTtvvd~~~~~~--~~~~~~~~~~~~~~~~~v~a~~~~~~~g~~--~  105 (338)
T cd01307          30 CYVSPGWIDLHVHVYQGGTRYGDRPDMIGVKSGVTTVVDAGSAGA--DNIDGFRYTVIERSATRVYAFLNISRVGLV--A  105 (338)
T ss_pred             CEEecCeEEeeecCCCCCcccCCCHhHHHHcCceeEEEeCCCCCC--CCHHHHHHHHHHhhhceEEEEEeeeccccc--c
Confidence            4799999999999998 666655421  23499999999997665  5555534333 3333211112788877654  2


Q ss_pred             CCC-------CHHHHHHH---HHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChh
Q 019093           78 DTT-------SPDEIKLA---RKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIF  147 (346)
Q Consensus        78 ~~~-------~~~el~~l---~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~  147 (346)
                      +..       ..+++.++   ...| |.|||+|+....+. ...+    ..+.+.++.++++|+|+++|+++...     
T Consensus       106 ~~~~~~~~~~~~~~l~~~~~e~~~g-i~gik~~~~~~~~~-~~~~----~~l~~~~~~a~~~~~pi~vH~~~~~~-----  174 (338)
T cd01307         106 QDELPDPDNIDEDAVVAAAREYPDV-IVGLKARASKSVVG-EWGI----KPLELAKKIAKEADLPLMVHIGSPPP-----  174 (338)
T ss_pred             ccccCChhHCCHHHHHHHHHHCcCc-EEEEEEEeeccccc-ccCC----cHHHHHHHHHHHcCCCEEEEeCCCCC-----
Confidence            211       12233333   2357 89999998532211 1122    33778899999999999999998642     


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHH-------HHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEe
Q 019093          148 DREKVFIDTILQPLIQRLPQLKVVMEHITTMDA-------VKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCL  220 (346)
Q Consensus       148 ~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~-------l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~  220 (346)
                        +   +..++  .+.+......|..+-+....       .+.++++....++..++.+             . ..+ ..
T Consensus       175 --~---~~~~~--~~l~~g~~~~H~~~g~~~~~~~~~~~~~~~~~~~~~~G~~~d~~~G-------------~-~~~-~~  232 (338)
T cd01307         175 --I---LDEVV--PLLRRGDVLTHCFNGKPNGIVDEEGEVLPLVRRARERGVIFDVGHG-------------T-ASF-SF  232 (338)
T ss_pred             --C---HHHHH--HHhcCCCEEEeccCCCCCCCCCCCCcHHHHHHHHHhCCEEEEeCCC-------------C-Cch-hH
Confidence              1   12222  12222122334433322000       1222222212233332210             0 000 00


Q ss_pred             CCCCChhhHHHHHHHHHcCCc-cEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHh-cCCHHHHHHHHchhhh
Q 019093          221 PVLKREIHRQAVVSAVTSGSR-KFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEE-MGALDKLEAFTSFNGP  298 (346)
Q Consensus       221 PPLR~~~d~~aL~~al~~G~I-d~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~-~~~l~~lv~~~s~nPA  298 (346)
                               ....+++..|.+ ++ ++||..+..   +   .  .| +  ...++.+...+.. ..+++++.++++.|||
T Consensus       233 ---------~~~~~l~~~G~~~~~-lstD~~~~~---~---~--~~-p--~~~l~~~l~~l~~~gi~~ee~~~~~T~NpA  291 (338)
T cd01307         233 ---------RVARAAIAAGLLPDT-ISSDIHGRN---R---T--NG-P--VYALATTLSKLLALGMPLEEVIEAVTANPA  291 (338)
T ss_pred             ---------HHHHHHHHCCCCCee-ecCCccccC---C---C--CC-c--cccHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence                     112334566864 57 899973211   1   0  11 1  1123333222233 3489999999999999


Q ss_pred             hhcCCCC-C------CccEEEEe
Q 019093          299 DFYGLPR-N------TSKIKLTK  314 (346)
Q Consensus       299 ki~gl~~-k------dAdlvi~d  314 (346)
                      |+||+++ +      .|||+++|
T Consensus       292 ~~lgl~~~G~l~~G~~ad~~v~~  314 (338)
T cd01307         292 RMLGLAEIGTLAVGYDADLTVFD  314 (338)
T ss_pred             HHcCCCCCCccCCCCcCCEEEEe
Confidence            9999942 2      79999998

The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.

>PRK13985 ureB urease subunit beta; Provisional

Probab=99.80  E-value=4.3e-19  Score=176.29  Aligned_cols=263  Identities=11%  Similarity=0.060  Sum_probs=161.6

Q ss_pred             eEEecCccccceecCC-CccccccccccCCceeEEEe-----CCCCCCCCCcHHH--HHHHHHHHHhhCCCCccEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSVSHYGRAIV-----MPNLKPPITTTAA--AVAYRESILKALPASSNFTPLMT   73 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~sGGvTtvv~-----mPnt~p~~~~~~~--~~~~~~~~~~~~~~~vd~~~~~~   73 (346)
                      ++|+||+||+|||+++ ++. +   ....|||||+++     |||++|+++++..  ++.+.+.+++ .  .+||++++.
T Consensus       125 ~iV~PG~ID~HvH~~~P~~~-~---~AlagGVTTvI~~G~gP~~~T~p~~~tpg~~~i~~ml~~a~~-~--pvn~gf~gk  197 (568)
T PRK13985        125 LIVTAGGIDTHIHFISPQQI-P---TAFASGVTTMIGGGTGPADGTNATTITPGRRNLKWMLRAAEE-Y--SMNLGFLGK  197 (568)
T ss_pred             CEEEeCEEEeeCCCCCccHH-H---HHhcCceEEEEccCcCCCCCCCCcCCCCcHHHHHHHHHHhhc-c--CccEEEecC
Confidence            4899999999999997 432 1   245699999999     7888888777654  3555554432 2  289988754


Q ss_pred             EEeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHH
Q 019093           74 LYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVF  153 (346)
Q Consensus        74 ~~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~a  153 (346)
                      .  +. .+.++|.++.++| +.|||++..+       +. +. ..++++|++++++|.++++||++-.-        .- 
T Consensus       198 G--~~-~~l~eL~el~~aG-A~GfK~~ed~-------g~-t~-~~I~~aL~vA~~~dv~V~iHtdtlne--------~g-  255 (568)
T PRK13985        198 G--NS-SNDASLADQIEAG-AIGFKIHEDW-------GT-TP-SAINHALDVADKYDVQVAIHTDTLNE--------AG-  255 (568)
T ss_pred             C--cc-CCHHHHHHHHHcC-CEEEEECCcc-------CC-CH-HHHHHHHHHHHHcCCEEEEeCCCCCC--------ch-
Confidence            2  22 3578899999999 6899987532       22 34 78999999999999999999997531        11 


Q ss_pred             HHHHHHHHHHhCCCCcEEEEccCCH---HHHHHHHccC--C---------CeeEEEc---------cchhhccc-hhhhc
Q 019093          154 IDTILQPLIQRLPQLKVVMEHITTM---DAVKFVESCK--E---------GFVAATV---------TPQHLVLN-RNALF  209 (346)
Q Consensus       154 v~~~l~~~la~~~g~~lhi~HvSt~---~~l~~i~~ak--g---------~~vt~Et---------~ph~L~l~-~~~~~  209 (346)
                         .++..++...|..+|++|+...   .+=++|+-+.  .         .+.|.-|         .-|||--+ .||+.
T Consensus       256 ---~~E~t~aa~~gr~iH~~H~egaggghapdi~~~~~~~nvlp~stnpt~p~t~nt~~e~~dm~m~~h~l~~~~~ed~a  332 (568)
T PRK13985        256 ---CVEDTMAAIAGRTMHTFHTEGAGGGHAPDIIKVAGEHNILPASTNPTIPFTVNTEAEHMDMLMVCHHLDKSIKEDVQ  332 (568)
T ss_pred             ---hhHHHHHHhcCCeEEEEeccCCCccchhhHHHHcCCCCcccCCCCCCCCCccCchhhhcCeEEeecCCCCCCcchhh
Confidence               1122567778999999999862   3345555543  1         1112111         12333222 22221


Q ss_pred             cCCCCCceEEeCCCCC----hhhHHHHHHHHHcCCccEEeecCCCCCCcc-----------ccccCCCCCC-ccchhHHH
Q 019093          210 QGGLRPHNYCLPVLKR----EIHRQAVVSAVTSGSRKFFLGTDSAPHERG-----------RKECACGCAG-IYNAPVAL  273 (346)
Q Consensus       210 ~~~~~~~~k~~PPLR~----~~d~~aL~~al~~G~Id~~i~SDHaP~~~~-----------~K~~~~~~~G-~~g~e~~l  273 (346)
                         | +.-    -+|.    .||  -|.+   -|.|.+ ++||.+.--+-           .|..  ...| ++.-    
T Consensus       333 ---f-a~s----rir~~tiaaed--~l~d---~G~~s~-~~SDs~~mgr~ge~~~r~~q~a~k~~--~~~g~l~~~----  392 (568)
T PRK13985        333 ---F-ADS----RIRPQTIAAED--TLHD---MGIFSI-TSSDSQAMGRVGEVITRTWQTADKNK--KEFGRLKEE----  392 (568)
T ss_pred             ---h-hhh----hccccccccCc--hhhh---CCcEEE-EeccchhhCcccceeeehHHHHHHHH--HhcCCCCCc----
Confidence               0 000    1222    122  2333   399999 89998632211           0100  0001 1100    


Q ss_pred             HHHHHHHHhcCCHHHHHHHHchhhhhhcCCCC--------CCccEEEEe-cceeec
Q 019093          274 SLYAKVFEEMGALDKLEAFTSFNGPDFYGLPR--------NTSKIKLTK-IPWKVP  320 (346)
Q Consensus       274 p~l~~~~~~~~~l~~lv~~~s~nPAki~gl~~--------kdAdlvi~d-~~~~v~  320 (346)
                          ..-..+.++++.++..+.|||+.+|+..        |.||||||| ..+.++
T Consensus       393 ----~~~~dnl~v~eAL~~yTin~A~A~G~e~~vGSLe~GK~ADlVv~d~d~f~~~  444 (568)
T PRK13985        393 ----KGDNDNFRIKRYLSKYTINPAIAHGISEYVGSVEVGKVADLVLWSPAFFGVK  444 (568)
T ss_pred             ----cccccccCHHHHHHHHhHHHHHHcCcccCceeECCCCccCEEEEcCccCCCC
Confidence                0001234678999999999999999842        279999998 444343

>PRK13206 ureC urease subunit alpha; Reviewed

Probab=99.80  E-value=2.2e-18  Score=172.40  Aligned_cols=154  Identities=12%  Similarity=0.055  Sum_probs=107.7

Q ss_pred             eEEecCccccceecCC-CccccccccccCCceeEEEeC-----CCCCCCCCcHH--HHHHHHHHHHhhCCCCccEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSVSHYGRAIVM-----PNLKPPITTTA--AAVAYRESILKALPASSNFTPLMT   73 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~sGGvTtvv~m-----Pnt~p~~~~~~--~~~~~~~~~~~~~~~~vd~~~~~~   73 (346)
                      ++|+||+||+|+|+++ ++.    -...+|||||+++|     |++.+..++..  .+..+.+.+. .+.  +||++++.
T Consensus       131 ~iV~PG~ID~HVH~~~Pg~~----~aALagGVTTvi~~G~gP~~~t~~~t~t~g~~~l~~~~~aa~-~~p--vn~g~~g~  203 (573)
T PRK13206        131 RILTAGAIDCHVHFICPQIV----DEALAAGITTLIGGGTGPAEGSKATTVTPGAWHLARMLEALD-GWP--VNVALLGK  203 (573)
T ss_pred             CEEEeCEEeeeeccCCchHH----HHHHcCCeEEEEcCCCCccccCcccccccchhHHHHHHHHhh-cCc--eeEEEecC
Confidence            4799999999999987 432    23456999999996     45555555544  2334444332 233  89998865


Q ss_pred             EEeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHH
Q 019093           74 LYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVF  153 (346)
Q Consensus        74 ~~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~a  153 (346)
                      .  +. ...+++.++.++| +.+||+|..+       +. +. ..++++|++++++|.++++||++-.-        .- 
T Consensus       204 g--~~-~~~~~L~el~~aG-A~GfKi~~d~-------g~-t~-~~i~~aL~~A~~~gv~V~iHadtlne--------~g-  261 (573)
T PRK13206        204 G--NT-VSAEALWEQLRGG-AGGFKLHEDW-------GS-TP-AAIDACLRVADAAGVQVALHSDTLNE--------AG-  261 (573)
T ss_pred             c--Cc-CCHHHHHHHHHCC-CcEEeecCcc-------CC-CH-HHHHHHHHHHHHhCCEEEEECCCccc--------cc-
Confidence            3  22 3567899999999 7899998643       23 33 78999999999999999999997531        11 


Q ss_pred             HHHHHHHHHHhCCCCcEEEEccCCH---HHHHHHHcc
Q 019093          154 IDTILQPLIQRLPQLKVVMEHITTM---DAVKFVESC  187 (346)
Q Consensus       154 v~~~l~~~la~~~g~~lhi~HvSt~---~~l~~i~~a  187 (346)
                         ..+..++...|.++|++|+...   .+=++|+-+
T Consensus       262 ---~~E~t~aa~~gr~iH~~H~egaggghapd~~~~~  295 (573)
T PRK13206        262 ---FVEDTLAAIAGRSIHAYHTEGAGGGHAPDIITVA  295 (573)
T ss_pred             ---hhhHHHHHhcCCeEEEEeccCCCcCcccHHHHhc
Confidence               1111467788999999999863   334555554

>PRK13308 ureC urease subunit alpha; Reviewed

Probab=99.79  E-value=3.7e-18  Score=170.25  Aligned_cols=153  Identities=14%  Similarity=0.087  Sum_probs=111.4

Q ss_pred             eEEecCccccceecCC-CccccccccccCCceeEEEeC---CCCCC-CCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEe
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSVSHYGRAIVM---PNLKP-PITTTAAAVAYRESILKALPASSNFTPLMTLYL   76 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~sGGvTtvv~m---Pnt~p-~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~   76 (346)
                      ++|+||+||+|||+++ ++.    -....|||||+++|   | +.| +.++++.++.+.+.++. ..  +||++++..  
T Consensus       129 ~IVtPG~ID~HVH~~~Pg~~----~aALagGVTTVi~gg~gP-t~p~~t~g~~~i~~~l~aa~~-~p--vN~g~~gkG--  198 (569)
T PRK13308        129 LIATPGAIDVHVHFDSAQLV----DHALASGITTMLGGGLGP-TVGIDSGGPFNTGRMLQAAEA-WP--VNFGFLGRG--  198 (569)
T ss_pred             CEEEeCEEEeeeCCCCccHH----HHHHcCCCcEEecCCcCC-CCCCCCCCHHHHHHHHHHHhc-CC--ccEEEEcCC--
Confidence            4799999999999987 433    23456999999995   6 444 46677777777765543 33  899988653  


Q ss_pred             CCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHH
Q 019093           77 TDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDT  156 (346)
Q Consensus        77 ~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~  156 (346)
                      .. ..+++|.++.++| +.+||+|+.+       +. +. ..++++|++++++|.++++||+.-.-        .    .
T Consensus       199 ~~-s~~aeL~eli~aG-A~GfKi~ed~-------g~-t~-~~i~~aL~~A~~~dv~VaiHadtlne--------~----g  255 (569)
T PRK13308        199 NS-SKPAALIEQVEAG-ACGLKIHEDW-------GA-MP-AAIDTCLEVADEYDFQVQLHTDTLNE--------S----G  255 (569)
T ss_pred             cc-cCHHHHHHHHHCC-CCEEeecCCC-------CC-CH-HHHHHHHHHHHhcCCEEEEeCCCcCc--------c----h
Confidence            32 3578899999999 7899998643       22 33 78999999999999999999997321        1    1


Q ss_pred             HHHHHHHhCCCCcEEEEccCC------HHHHHHHHcc
Q 019093          157 ILQPLIQRLPQLKVVMEHITT------MDAVKFVESC  187 (346)
Q Consensus       157 ~l~~~la~~~g~~lhi~HvSt------~~~l~~i~~a  187 (346)
                      .++..++...|..+|++|+.+      ++-++++.+.
T Consensus       256 ~~E~t~~a~~gr~iH~~H~egaggghapd~l~~~~~~  292 (569)
T PRK13308        256 FVEDTLAAIGGRTIHMYHTEGAGGGHAPDIIRVVGEP  292 (569)
T ss_pred             HHHHHHHHhcCCeEEEEeccCCccCchhHHHHHhCCC
Confidence            222246667799999999987      5555555543

>TIGR01178 ade adenine deaminase

Probab=99.78  E-value=1.7e-17  Score=168.28  Aligned_cols=248  Identities=13%  Similarity=0.072  Sum_probs=151.5

Q ss_pred             eEEecCccccceecCC-Ccccccccccc--CCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE---
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPHS--VSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLY---   75 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~--sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~---   75 (346)
                      ++|+||+||+|+|++. +. ..++|.+.  .||+||+++|||+.|..+..+.++.+.+.+++ +.  +||.+.+...   
T Consensus        46 ~~v~PG~ID~H~Hi~~~~~-~~~~~~~~al~~GvTtvv~~P~~~~~v~g~~~~~~~~~~a~~-~~--~d~~~~~~s~vp~  121 (552)
T TIGR01178        46 EYAVPGFIDAHIHIESSML-TPSEFAKLVLPHGVTTVVSDPHEIANVNGEDGINFMLNNAKK-TP--LNFYFMLPSCVPA  121 (552)
T ss_pred             CEEEeCeEecccccCCCCC-ChhHHHHHHHCCCEEEEEcCCCCCCCCCCHHHHHHHHHHhhc-CC--cEEEEECCCCCCC
Confidence            5899999999999987 44 34556554  49999999999999988899988888776653 34  7874432210   


Q ss_pred             ---eCC--CCCHHHHHHHHHc-CCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhh
Q 019093           76 ---LTD--TTSPDEIKLARKT-GVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDR  149 (346)
Q Consensus        76 ---~~~--~~~~~el~~l~~~-G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~  149 (346)
                         .+.  ....+++.++.+. | |.|+|.||+|.    +....|  ..+++.++.+++.|+++..||+.-.        
T Consensus       122 ~~~e~~g~~~~~~~i~~~~~~~~-V~glke~m~~~----~v~~~d--~~~l~~i~~a~~~g~~I~gHap~l~--------  186 (552)
T TIGR01178       122 LQFETSGAVLTAEDIDELMELDE-VLGLAEVMDYP----GVINAD--IEMLNKINSARKRNKVIDGHCPGLS--------  186 (552)
T ss_pred             CcccCCCCccCHHHHHHHHcCCC-ccEEEEEecch----hhcCCC--HHHHHHHHHHHhCCCEEEecCCCCC--------
Confidence               011  1146688888865 7 89999999752    222234  6677788999999999999999532        


Q ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEccCC--HHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChh
Q 019093          150 EKVFIDTILQPLIQRLPQLKVVMEHITT--MDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREI  227 (346)
Q Consensus       150 E~~av~~~l~~~la~~~g~~lhi~HvSt--~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~  227 (346)
                           ...+..++  ..|..  .+|-++  .++++.++.  |..+..               +.|  ..         ..
T Consensus       187 -----~~eL~~~~--~aGi~--~dHe~~s~~ea~e~~~~--Gm~~~i---------------r~g--s~---------~~  229 (552)
T TIGR01178       187 -----GKLLNKYI--SAGIS--NDHESTSIEEAREKLRL--GMKLMI---------------REG--SA---------AK  229 (552)
T ss_pred             -----HHHHHHHH--HcCCC--CCcCcCCHHHHHHHHHC--CCEEEE---------------eCC--cc---------cc
Confidence                 12221012  23443  567552  344444332  544332               111  11         12


Q ss_pred             hHHHHHHHHH--cCCccEEeecCC-CCCCccccccCCCCCCccchhHHHHHHHHHHHh-cCCHHHHHHHHchhhhhhcCC
Q 019093          228 HRQAVVSAVT--SGSRKFFLGTDS-APHERGRKECACGCAGIYNAPVALSLYAKVFEE-MGALDKLEAFTSFNGPDFYGL  303 (346)
Q Consensus       228 d~~aL~~al~--~G~Id~~i~SDH-aP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~-~~~l~~lv~~~s~nPAki~gl  303 (346)
                      +-+.+..++.  ++.-.+ ++||- -|...-+       .|      .+........+ ..++++++++.|.|||+.+||
T Consensus       230 n~~~~~~~~~~~~~~~~~-l~TD~~~~~~~~~-------~g------~l~~~v~~ai~~g~~~~~Al~maT~npA~~lgl  295 (552)
T TIGR01178       230 NLEALHPLINEKNCRSLM-LCTDDRHVNDILN-------EG------HINHIVRRAIEHGVDPFDALQMASINPAEHFGI  295 (552)
T ss_pred             CHHHHHHHHhhcCCceEE-EEeCCCChhHHHh-------cC------CHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCC
Confidence            2233444333  233455 89992 1211000       01      12222222222 348999999999999999999


Q ss_pred             CC-C------CccEEEEe--cceee
Q 019093          304 PR-N------TSKIKLTK--IPWKV  319 (346)
Q Consensus       304 ~~-k------dAdlvi~d--~~~~v  319 (346)
                      +. +      .|||+++|  +.+.+
T Consensus       296 ~~~G~I~pG~~ADlvvl~~l~~~~v  320 (552)
T TIGR01178       296 DVGGLIAPGDPADFVILKDLRNFKV  320 (552)
T ss_pred             CCCcccCCCCcCCEEEECCCCCceE
Confidence            52 2      89999998  55544

The family described by this model includes an experimentally characterized adenine deaminase of Bacillus subtilis. It also include a member from Methanobacterium thermoautotrophicum, in which adenine deaminase activity has been detected.

>cd00375 Urease_alpha Urease alpha-subunit; Urease is a nickel-dependent metalloenzyme that catalyzes the hydrolysis of urea to form ammonia and carbon dioxide

Probab=99.78  E-value=8.1e-18  Score=167.72  Aligned_cols=144  Identities=16%  Similarity=0.110  Sum_probs=109.5

Q ss_pred             eEEecCccccceecCC-CccccccccccCCceeEEEeC---C----CCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSVSHYGRAIVM---P----NLKPPITTTAAAVAYRESILKALPASSNFTPLMT   73 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~sGGvTtvv~m---P----nt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~   73 (346)
                      ++|+||+||.|+|+++ ++.    -....|||||+++|   |    |+.|...+++.++.+.+.++. ..  +||++++.
T Consensus       125 ~iV~PG~ID~HvH~~~P~~~----~aAlagGVTTvI~~G~gP~~gtnatp~t~g~~~l~~ml~aa~~-~p--in~g~~gk  197 (567)
T cd00375         125 KIVTAGGIDTHVHFICPQQI----EEALASGITTMIGGGTGPAAGTKATTCTPGPWNIKRMLQAADG-LP--VNIGFLGK  197 (567)
T ss_pred             CEEeeceEECccCCCCccHH----HHHHcCCCcEEEcCCcCcccccCCCCCCCCHHHHHHHHHHhhc-CC--ceEEEEec
Confidence            4899999999999987 431    23456999999997   8    666677777888887776653 33  89998864


Q ss_pred             EEeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHH
Q 019093           74 LYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVF  153 (346)
Q Consensus        74 ~~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~a  153 (346)
                      .  + +.+.++|.++.++| +++||+|..+       +. +. ..++++|++++++|.++++||+.-.        |.  
T Consensus       198 g--~-~~~l~eL~e~~~aG-A~GfK~~eD~-------g~-t~-~~i~~aL~~A~~~dv~VaiHadtln--------e~--  254 (567)
T cd00375         198 G--N-GSSPDALAEQIEAG-ACGLKLHEDW-------GA-TP-AAIDTCLSVADEYDVQVAIHTDTLN--------ES--  254 (567)
T ss_pred             C--c-cccHHHHHHHHHcC-CEEEEecCCC-------CC-CH-HHHHHHHHHHHhhCCEEEEECCCCC--------cc--
Confidence            3  2 23578899999999 6899998643       23 34 7899999999999999999999642        11  


Q ss_pred             HHHHHHHHHHhCCCCcEEEEccCC
Q 019093          154 IDTILQPLIQRLPQLKVVMEHITT  177 (346)
Q Consensus       154 v~~~l~~~la~~~g~~lhi~HvSt  177 (346)
                        -.++..++...|..+|++|+..
T Consensus       255 --g~~E~t~aa~~gr~iH~~H~eg  276 (567)
T cd00375         255 --GFVEDTIAAIKGRTIHTYHTEG  276 (567)
T ss_pred             --hHHHHHHHHhcCCeEEEEecCC
Confidence              1222257888899999999986

Nickel-dependent ureases are found in bacteria, fungi and plants. Their primary role is to allow the use of external and internally generated urea as a nitrogen source. The enzyme consists of 3 subunits, alpha, beta and gamma, which can be fused and present on a single protein chain and which in turn forms multimers, mainly trimers. The large alpha subunit is the catalytic domain containing an active site with a bi-nickel center complexed by a carbamylated lysine. The beta and gamma subunits play a role in subunit association to form the higher order trimers.

>PRK13207 ureC urease subunit alpha; Reviewed

Probab=99.77  E-value=1.6e-17  Score=166.66  Aligned_cols=153  Identities=14%  Similarity=0.112  Sum_probs=107.1

Q ss_pred             eEEecCccccceecCC-CccccccccccCCceeEEEeC---CCC--CCCCCcH--HHHHHHHHHHHhhCCCCccEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSVSHYGRAIVM---PNL--KPPITTT--AAAVAYRESILKALPASSNFTPLMT   73 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~sGGvTtvv~m---Pnt--~p~~~~~--~~~~~~~~~~~~~~~~~vd~~~~~~   73 (346)
                      ++|+||+||+|+|+++ ++    .-....|||||+++|   |++  .|..+++  ..+..+.+..+. ..  +||++++.
T Consensus       125 ~iV~PG~ID~HvH~~~P~~----~~aALagGVTTVi~mg~gP~~gt~~~t~tpG~~~l~~~l~~a~~-~p--in~g~~g~  197 (568)
T PRK13207        125 LIVTAGGIDTHIHFICPQQ----IEEALASGVTTMIGGGTGPATGTNATTCTPGPWHIHRMLQAADA-FP--MNIGFLGK  197 (568)
T ss_pred             CEEEeCeEECccCCccccH----HHHHHcCCCCEEEcCCcCCccCCcccccccchHHHHHHHHHhhc-CC--ceEEEEcC
Confidence            4799999999999987 42    123456999999999   654  4444343  335555443332 22  78988764


Q ss_pred             EEeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHH
Q 019093           74 LYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVF  153 (346)
Q Consensus        74 ~~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~a  153 (346)
                      .  + ....+++.++.++| +.+||+|..+       +. +. ..++++|++++++|.++++||+...-        .  
T Consensus       198 g--~-~~~~~~L~e~i~aG-A~gfKi~~d~-------g~-t~-~~l~~aL~~A~~~gv~V~iHa~tlne--------~--  254 (568)
T PRK13207        198 G--N-ASLPEALEEQIEAG-AIGLKLHEDW-------GA-TP-AAIDNCLSVADEYDVQVAIHTDTLNE--------S--  254 (568)
T ss_pred             C--C-cccHHHHHHHHHcC-CCEEeecCCC-------CC-CH-HHHHHHHHHHHHhCCEEEEeCCCccc--------c--
Confidence            2  2 23577899999999 6899999643       23 33 78999999999999999999986431        1  


Q ss_pred             HHHHHHHHHHhCCCCcEEEEccC------CHHHHHHHHc
Q 019093          154 IDTILQPLIQRLPQLKVVMEHIT------TMDAVKFVES  186 (346)
Q Consensus       154 v~~~l~~~la~~~g~~lhi~HvS------t~~~l~~i~~  186 (346)
                        -..+..++...|..+|++|+.      .++-++++.+
T Consensus       255 --G~~e~t~~a~~g~~iH~~H~egaggghapdii~~~~~  291 (568)
T PRK13207        255 --GFVEDTIAAFKGRTIHTFHTEGAGGGHAPDIIKVAGE  291 (568)
T ss_pred             --hHHHHHHHhcCCCEEEEEeecCCCcCCchHHHHHhhc
Confidence              111114777889999999987      3555666665

>PRK13309 ureC urease subunit alpha; Reviewed

Probab=99.77  E-value=2.6e-17  Score=165.39  Aligned_cols=269  Identities=14%  Similarity=0.052  Sum_probs=160.5

Q ss_pred             eEEecCccccceecCC-CccccccccccCCceeEEEe-------CCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSVSHYGRAIV-------MPNLKPPITTTAAAVAYRESILKALPASSNFTPLMT   73 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~sGGvTtvv~-------mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~   73 (346)
                      ++|+||+||+|||+++ ++.    .....|||||+++       |||+.+.......++.+.+.+++ ..  +||++++.
T Consensus       129 ~iVtPG~ID~HvH~~~P~~~----~aAl~gGVTTvi~~G~gp~~~~n~~~~t~g~~~i~~~l~~a~~-~p--vn~g~~gk  201 (572)
T PRK13309        129 LILTAAGIDTHIHLISPQQA----YHALSNGVTTFFGGGIGPTDGTNGTTVTPGPWNIRQMLRSIEG-LP--VNVGILGK  201 (572)
T ss_pred             CEEEeCEEEeecccCCcchH----HHHHcCceEEEEecCCCCccCCCCCCCCCCHHHHHHHHHHhcc-CC--cCEEEEcC
Confidence            4899999999999998 532    2455699999995       45666666666677777666553 23  89988754


Q ss_pred             EEeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHH
Q 019093           74 LYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVF  153 (346)
Q Consensus        74 ~~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~a  153 (346)
                      .  +. ....+|.++.++| +.+||++..+       +. +. ..++++|++++++|.++++||++-.        |...
T Consensus       202 g--~~-~~~~~l~el~~aG-a~gfk~~~d~-------g~-t~-~~L~~aLe~A~~~gv~VaiH~d~ln--------E~g~  260 (572)
T PRK13309        202 G--NS-YGRGPLLEQAIAG-VAGYKVHEDW-------GA-TA-AALRHALRVADEVDIQVAVHTDSLN--------ECGY  260 (572)
T ss_pred             C--CC-CCHHHHHHHHhcC-cEEEEecCcC-------Cc-CH-HHHHHHHHHHHhcCCEEEEeCCccc--------cchh
Confidence            2  22 2467888888899 6899998643       22 44 7899999999999999999999753        1111


Q ss_pred             HHHHHHHHHHhCCCCcEEEEccCCH---HHHHHHHccCCCe-eEEEccc-------------------hhhccc-hhhhc
Q 019093          154 IDTILQPLIQRLPQLKVVMEHITTM---DAVKFVESCKEGF-VAATVTP-------------------QHLVLN-RNALF  209 (346)
Q Consensus       154 v~~~l~~~la~~~g~~lhi~HvSt~---~~l~~i~~akg~~-vt~Et~p-------------------h~L~l~-~~~~~  209 (346)
                      + ..   .++++.+.++|++|....   .+=++|+-+..-+ +-..|.|                   |||--+ .||..
T Consensus       261 v-E~---~~aa~~grpih~~H~~Gaggghapd~~~~~~~~~~~~~st~pt~p~~~~~~~e~~~m~m~~h~l~~~~~~D~~  336 (572)
T PRK13309        261 V-ED---TIDAFEGRTIHTFHTEGAGGGHAPDIIKVASQTNVLPSSTNPTLPYGVNSQAELFDMIMVCHNLNPNVPADVA  336 (572)
T ss_pred             H-HH---HHHHhCCCceeeeeccCcccCCchhHHHhcCCCCcccCCCCCCCCCcccchHhhhchhhhhccCCCCCCCChh
Confidence            2 12   478889999999999752   2334444432111 1122222                   233211 11110


Q ss_pred             cCCCCCceEEeCCCCChhhHHHHH-HHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHH--------HH
Q 019093          210 QGGLRPHNYCLPVLKREIHRQAVV-SAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAK--------VF  280 (346)
Q Consensus       210 ~~~~~~~~k~~PPLR~~~d~~aL~-~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~--------~~  280 (346)
                         + +.-    =||.  +|-+-| ..+..|.+-+ ++||+.--.+ ....+     +.++++..-.-..        ..
T Consensus       337 ---~-a~s----rig~--e~~~a~~~l~daGa~~~-~gSD~pv~gr-~~~~p-----~~~iq~Av~rk~~~g~l~~~~~~  399 (572)
T PRK13309        337 ---F-AES----RVRP--ETIAAENVLHDMGVISM-FSSDSQAMGR-VGENW-----LRAIQTADAMKAARGKLPEDAAG  399 (572)
T ss_pred             ---H-HHH----hhCc--hhhcchhHHHhCCCEEE-EcCCCCcccC-CcccH-----HHHHHHHHHHHhccCCCCccCCC
Confidence               0 000    0222  222333 3455688888 8999732111 00000     0111111111000        00


Q ss_pred             HhcCCHHHHHHHHchhhhhhcCCC-CC-------CccEEEEe-cceee
Q 019093          281 EEMGALDKLEAFTSFNGPDFYGLP-RN-------TSKIKLTK-IPWKV  319 (346)
Q Consensus       281 ~~~~~l~~lv~~~s~nPAki~gl~-~k-------dAdlvi~d-~~~~v  319 (346)
                      .+..++.+.++..+.|||+++|+. ++       .|||+||| ..+.+
T Consensus       400 ~~~~~v~~aL~~yT~n~A~a~g~e~~~GsLe~Gk~ADlvvld~d~f~~  447 (572)
T PRK13309        400 NDNFRVLRYVAKITINPAITQGVSHVIGSVEVGKMADLVLWEPRFFGA  447 (572)
T ss_pred             cccccHHHHHHHHhHHHHHHcCcccCccccCCCCcCCEEEEchhhcCC
Confidence            123467788999999999999983 32       79999998 44433

>PF12890 DHOase: Dihydro-orotase-like; InterPro: IPR024403 This entry represents a small family of dihydro-orotase-like proteins from bacteria

Probab=99.73  E-value=1.5e-18  Score=140.19  Aligned_cols=124  Identities=20%  Similarity=0.205  Sum_probs=97.6

Q ss_pred             eEEecCccccceecCC-CccccccccccCCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCC
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTT   80 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~   80 (346)
                      ++++||+||+|||+|+ |.++||++.+      |+..|||+.|..               +.   +..          +.
T Consensus         2 kli~~g~vd~hVhlrepg~~~keti~t------T~~ampnt~paP---------------a~---itv----------~~   47 (142)
T PF12890_consen    2 KLILPGLVDVHVHLREPGFEAKETIET------TWCAMPNTFPAP---------------AG---ITV----------ED   47 (142)
T ss_pred             ceeehhhhhhhhhhhcccchhhhhhhc------eeeecCccCCCC---------------cc---eee----------ee
Confidence            6899999999999999 9999999987      899999999865               11   111          11


Q ss_pred             CHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCC-------------h-
Q 019093           81 SPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVD-------------I-  146 (346)
Q Consensus        81 ~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~-------------~-  146 (346)
                      ..+|       + +         ++++++.++... ..+++.|+. ++++.++..||||++++.+             . 
T Consensus        48 ~~~e-------~-~---------afsddg~giq~~-~lm~eamk~-a~l~~~i~ahceDd~l~~~g~v~~ge~~q~~g~~  108 (142)
T PF12890_consen   48 DGEE-------A-F---------AFSDDGYGIQIQ-LLMYEAMKK-AELDQEIVAHCEDDELTNGGVVHDGELPQFLGVY  108 (142)
T ss_pred             cCcc-------e-E---------EEecCCceeeeH-HHHHHHHHH-HHcccHHHHhhcccccccccccccchhhHHhCCc
Confidence            2222       2 1         124556667665 788999999 8999999999999987631             1 


Q ss_pred             --hhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHH
Q 019093          147 --FDREKVFIDTILQPLIQRLPQLKVVMEHITTMDA  180 (346)
Q Consensus       147 --~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~  180 (346)
                        -.+|...+.|.+  .|++.+||..||||+||+++
T Consensus       109 L~G~cEs~~~~rd~--lLak~~g~~yhVchvstkes  142 (142)
T PF12890_consen  109 LKGNCESVQCARDV--LLAKATGCHYHVCHVSTKES  142 (142)
T ss_pred             CCCcchHHHHHHHH--HhhhccCCcEEEEEEeccCC
Confidence              258999999999  89999999999999999863

>cd01298 ATZ_TRZ_like TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases

Probab=99.69  E-value=1.3e-15  Score=149.47  Aligned_cols=197  Identities=17%  Similarity=0.118  Sum_probs=118.5

Q ss_pred             eeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEec-CCCCCCCChh-hhHHHHHHHHHHHHHHhCCCCcEE
Q 019093           94 VFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHG-EVTDPIVDIF-DREKVFIDTILQPLIQRLPQLKVV  171 (346)
Q Consensus        94 v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHa-E~~~~~~~~~-~~E~~av~~~l~~~la~~~g~~lh  171 (346)
                      ...+|++++...   ...+ +. +.+.++++.+++.|+++.+|+ |+........ ......+.. +  .-....+.++.
T Consensus       176 ~~~~k~~~~~~~---~~~~-~~-~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~  247 (411)
T cd01298         176 DGRIRVALAPHA---PYTC-SD-ELLREVAELAREYGVPLHIHLAETEDEVEESLEKYGKRPVEY-L--EELGLLGPDVV  247 (411)
T ss_pred             CCceEEEEeCCC---CccC-CH-HHHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHhCCCHHHH-H--HHcCCCCCCeE
Confidence            456899875321   1223 34 789999999999999999996 4432100000 000001111 1  11223467766


Q ss_pred             EEccC--CHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCC
Q 019093          172 MEHIT--TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDS  249 (346)
Q Consensus       172 i~HvS--t~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDH  249 (346)
                      |.|.+  +.+.++.+++.   .+++++||++-.      .   ++.   ..||         +++.++.|..-+ +|||+
T Consensus       248 i~H~~~l~~~~~~~l~~~---gi~~~~~p~~~~------~---~~~---~~~~---------~~~~~~~Gv~~~-~GsD~  302 (411)
T cd01298         248 LAHCVWLTDEEIELLAET---GTGVAHNPASNM------K---LAS---GIAP---------VPEMLEAGVNVG-LGTDG  302 (411)
T ss_pred             EEEecCCCHHHHHHHHHc---CCeEEEChHHhh------h---hhh---CCCC---------HHHHHHCCCcEE-EeCCC
Confidence            77766  56777777753   478899997521      1   111   1244         445677788877 89998


Q ss_pred             CCCCccccccCCCCCCccch-hHHHHHHHHHHH----hcCCHHHHHHHHchhhhhhcCCC-CC------CccEEEEe--c
Q 019093          250 APHERGRKECACGCAGIYNA-PVALSLYAKVFE----EMGALDKLEAFTSFNGPDFYGLP-RN------TSKIKLTK--I  315 (346)
Q Consensus       250 aP~~~~~K~~~~~~~G~~g~-e~~lp~l~~~~~----~~~~l~~lv~~~s~nPAki~gl~-~k------dAdlvi~d--~  315 (346)
                      .+...          ...-+ |..+++++....    ...++++++++.+.|||+++|++ .+      +|||+|+|  .
T Consensus       303 ~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~T~~~A~~lg~~~~G~i~~G~~ADlvv~d~~~  372 (411)
T cd01298         303 AASNN----------NLDMFEEMRLAALLQKLAHGDPTALPAEEALEMATIGGAKALGLDEIGSLEVGKKADLILIDLDG  372 (411)
T ss_pred             CccCC----------CcCHHHHHHHHHHHhccccCCCCcCCHHHHHHHHHhhHHHHhCCccCCCcCCCccCCEEEEeCCC
Confidence            65321          01111 344444332111    13589999999999999999985 22      79999999  5


Q ss_pred             ceeecCCccccCCccccc
Q 019093          316 PWKVPEAFSFSFGDIIPM  333 (346)
Q Consensus       316 ~~~v~~~~~~s~~~~sp~  333 (346)
                      .|.++.+++.++..|+++
T Consensus       373 ~~~~~~~~~~~~~~~~~~  390 (411)
T cd01298         373 PHLLPVHDPISHLVYSAN  390 (411)
T ss_pred             CccCCccchhhHheEecC
Confidence            777777777777666555

Atrazine, a chlorinated herbizide, can be catabolized by a variety of different bacteria. The first three steps of the atrazine dehalogenation pathway are catalyzed by atrazine chlorohydrolase (AtzA), hydroxyatrazine ethylaminohydrolase (AtzB), and N-isopropylammelide N-isopropylaminohydrolase (AtzC). All three enzymes belong to the superfamily of metal dependent hydrolases. AtzA and AtzB, beside other related enzymes are represented in this CD.

>cd01295 AdeC Adenine deaminase (AdeC) directly deaminates adenine to form hypoxanthine

Probab=99.69  E-value=3.9e-15  Score=147.26  Aligned_cols=244  Identities=14%  Similarity=0.081  Sum_probs=149.2

Q ss_pred             eEEecCccccceecCC-Cccccccccc--cCCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEe--
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPH--SVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYL--   76 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s--~sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~--   76 (346)
                      ++|+||+||+|+|++. +... +++..  ..||||||+++|++.|.....+.++.+.+..++ ..  +++.+.+....  
T Consensus         5 ~~v~PG~ID~H~Hi~~~~~~~-~~~~~~a~~~GvTtvv~~p~~~~~v~g~~~~~~~~~~a~~-~p--~~~~~~~p~~vp~   80 (422)
T cd01295           5 KYIVPGFIDAHLHIESSMLTP-SEFAKAVLPHGTTTVIADPHEIANVAGVDGIEFMLEDAKK-TP--LDIFWMLPSCVPA   80 (422)
T ss_pred             CEEccCEEEccCCcCCCCCCh-HHHHHHHHCCCcEEEEeCCCCCCcCCCHHHHHHHHHHHhC-CC--ceEEEeCCCcCCC
Confidence            5899999999999987 4333 33432  349999999999999999999988877775432 33  67744332100  


Q ss_pred             CC------CCCHHHHHHHHHc-CCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhh
Q 019093           77 TD------TTSPDEIKLARKT-GVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDR  149 (346)
Q Consensus        77 ~~------~~~~~el~~l~~~-G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~  149 (346)
                      ++      ....+++.++.+. | |.++|-+|.|.    .... ++ ..+.+.++.+++.|+++.+||-...        
T Consensus        81 t~~e~~g~~~~~~~i~~l~~~~~-vvglgE~md~~----~v~~-~~-~~l~~~i~~A~~~g~~v~~Ha~g~~--------  145 (422)
T cd01295          81 TPFETSGAELTAEDIKELLEHPE-VVGLGEVMDFP----GVIE-GD-DEMLAKIQAAKKAGKPVDGHAPGLS--------  145 (422)
T ss_pred             CCCCCCCCcCCHHHHHHHhcCCC-CcEEEEeccCc----cccC-Cc-HHHHHHHHHHHhCCCEEEEeCCCCC--------
Confidence            11      1136678888764 6 89999988652    1112 33 7899999999999999999996532        


Q ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEccC--CHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChh
Q 019093          150 EKVFIDTILQPLIQRLPQLKVVMEHIT--TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREI  227 (346)
Q Consensus       150 E~~av~~~l~~~la~~~g~~lhi~HvS--t~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~  227 (346)
                       ...+...    ++  .|..  -+|-+  ..+.++.++  +|..+.  +.+-.                        ...
T Consensus       146 -~~~L~a~----l~--aGi~--~dH~~~~~eea~e~l~--~G~~i~--i~~g~------------------------~~~  188 (422)
T cd01295         146 -GEELNAY----MA--AGIS--TDHEAMTGEEALEKLR--LGMYVM--LREGS------------------------IAK  188 (422)
T ss_pred             -HHHHHHH----HH--cCCC--CCcCCCcHHHHHHHHH--CCCEEE--EECcc------------------------cHh
Confidence             1122222    22  2332  13544  455666553  244332  22110                        023


Q ss_pred             hHHHHHHHHH--cCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHh-cCCHHHHHHHHchhhhhhcCCC
Q 019093          228 HRQAVVSAVT--SGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEE-MGALDKLEAFTSFNGPDFYGLP  304 (346)
Q Consensus       228 d~~aL~~al~--~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~-~~~l~~lv~~~s~nPAki~gl~  304 (346)
                      +.+.+.+.+.  .+.--+ ++||. |+...-.     ..|      .+..+...... ..+++++++..+.|||++||++
T Consensus       189 ~~~~~~~~l~~~~~~~i~-l~TD~-~~~~~~~-----~~g------~~~~v~r~a~~~g~s~~eal~~aT~n~A~~~gl~  255 (422)
T cd01295         189 NLEALLPAITEKNFRRFM-FCTDD-VHPDDLL-----SEG------HLDYIVRRAIEAGIPPEDAIQMATINPAECYGLH  255 (422)
T ss_pred             hHHHHHHhhhhccCCeEE-EEcCC-CCchhhh-----hcc------hHHHHHHHHHHcCCCHHHHHHHHhHHHHHHcCCC
Confidence            3444555554  255556 89997 4321000     012      12222222223 3489999999999999999983


Q ss_pred             C-C------CccEEEEe
Q 019093          305 R-N------TSKIKLTK  314 (346)
Q Consensus       305 ~-k------dAdlvi~d  314 (346)
                      . +      .|||+++|
T Consensus       256 ~~G~i~~G~~AD~vv~~  272 (422)
T cd01295         256 DLGAIAPGRIADIVILD  272 (422)
T ss_pred             CCcccCCCCcCCEEEEC
Confidence            2 2      79999998

This reaction is part of one of the adenine salvage pathways, as well as the degradation pathway. It is important for adenine utilization as a purine, as well as a nitrogen source in bacteria and archea.

>PRK09237 dihydroorotase; Provisional

Probab=99.68  E-value=7.1e-15  Score=143.45  Aligned_cols=251  Identities=17%  Similarity=0.121  Sum_probs=130.7

Q ss_pred             eEEecCccccceecCCCcccccc-c--cccCCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhC-CCCccEEEEEEEEeC
Q 019093            2 ELTLTQPDDWHLHLRDGDLLKAV-V--PHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKAL-PASSNFTPLMTLYLT   77 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~g~~~ke~-~--~s~sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~-~~~vd~~~~~~~~~~   77 (346)
                      ++|+||+||.|+|+..+...+++ .  ....||+||+++||++.|  ++.+.+..+.++..+.. ...+++.+++..  +
T Consensus        49 ~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~G~Ttv~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~--~  124 (380)
T PRK09237         49 LYVSPGWIDLHVHVYPGSTPYGDEPDEVGVRSGVTTVVDAGSAGA--DNFDDFRKLTIEASKTRVLAFLNISRIGLL--A  124 (380)
T ss_pred             CEEecCEEEeeecCCCCCCccCCCHHHHHHhCCcCEEEECCCCCC--CCHHHHHHHHHhhhCcEEEEEEeeeccccc--c
Confidence            48999999999999863222222 1  123499999999997554  56665554444321110 111344443322  1


Q ss_pred             CC-------CCHHHHHHHHH---cCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChh
Q 019093           78 DT-------TSPDEIKLARK---TGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIF  147 (346)
Q Consensus        78 ~~-------~~~~el~~l~~---~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~  147 (346)
                      ++       ...+++.++.+   .| +.|||.+|.+... ...++++  ..+...+  +++.|+++.+|+++...     
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~-v~glk~~~~~~v~-~~~~~~~--~~~~~~~--a~~~g~~v~~H~~~~~~-----  193 (380)
T PRK09237        125 QDELADLEDIDADAVAEAVKRNPDF-IVGIKARMSSSVV-GDNGIEP--LELAKAI--AAEANLPLMVHIGNPPP-----  193 (380)
T ss_pred             cchhcCHhHCCHHHHHHHHHhCcCc-EEEEEEEEecccc-cccCCch--HHHHHHH--HHhcCCCEEEEcCCCCC-----
Confidence            11       12345666654   45 8999999865311 1222333  3343333  44889999999998642     


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEccCC-----------HHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCc
Q 019093          148 DREKVFIDTILQPLIQRLPQLKVVMEHITT-----------MDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPH  216 (346)
Q Consensus       148 ~~E~~av~~~l~~~la~~~g~~lhi~HvSt-----------~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~  216 (346)
                        +   ..+++  .+.+.-..-.|..+.+.           ..+.+.++    ..++.+.+.+               ..
T Consensus       194 --~---~~~l~--~~l~~g~~~~H~~~~~~~~~~~~~~~~~~~a~~~l~----~G~~~~ig~g---------------~~  247 (380)
T PRK09237        194 --S---LEEIL--ELLRPGDILTHCFNGKPNRILDEDGELRPSVLEALE----RGVRLDVGHG---------------TA  247 (380)
T ss_pred             --C---HHHHH--hhccCCCEEEecCCCCCCCccCCCCcchHHHHHHHH----CCEEEEecCC---------------CC
Confidence              1   12222  12222122233333332           12222222    1233333211               00


Q ss_pred             eEEeCCCCChhhHHHHHHHHHcCC-ccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHh-cCCHHHHHHHHc
Q 019093          217 NYCLPVLKREIHRQAVVSAVTSGS-RKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEE-MGALDKLEAFTS  294 (346)
Q Consensus       217 ~k~~PPLR~~~d~~aL~~al~~G~-Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~-~~~l~~lv~~~s  294 (346)
                      ..         +.+.+.+.+..|. .+. ++||..|-..  +      .+ +.  ..++.....+.+ ..+++++.++++
T Consensus       248 ~~---------~~~~~~~l~~~g~~~~~-l~tD~~~~~~--~------~~-~~--~~l~~~~~~~~~~g~~~~~al~~aT  306 (380)
T PRK09237        248 SF---------SFKVAEAAIAAGILPDT-ISTDIYCRNR--I------NG-PV--YSLATVMSKFLALGMPLEEVIAAVT  306 (380)
T ss_pred             cc---------cHHHHHHHHHCCCCceE-EECCCCCCCc--c------cc-hH--hHHHHHHHHHHHhCCCHHHHHHHHH
Confidence            00         1111223445674 468 8999755221  0      01 11  112222222223 348999999999


Q ss_pred             hhhhhhcCCCC-C------CccEEEEe
Q 019093          295 FNGPDFYGLPR-N------TSKIKLTK  314 (346)
Q Consensus       295 ~nPAki~gl~~-k------dAdlvi~d  314 (346)
                      .|||++||++. +      .|||+++|
T Consensus       307 ~n~A~~lgl~~~G~l~~G~~ADlvv~~  333 (380)
T PRK09237        307 KNAADALRLPELGRLQVGSDADLTLFT  333 (380)
T ss_pred             HHHHHHcCCCCCCcCCCCCcCCEEEEe
Confidence            99999999842 2      79999998

>PRK07583 cytosine deaminase-like protein; Validated

Probab=99.64  E-value=8e-15  Score=145.77  Aligned_cols=193  Identities=14%  Similarity=0.114  Sum_probs=114.3

Q ss_pred             HHHHHHHH-HcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEec-CCCCCCCChhhhHHHHHHHHHH
Q 019093           82 PDEIKLAR-KTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHG-EVTDPIVDIFDREKVFIDTILQ  159 (346)
Q Consensus        82 ~~el~~l~-~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHa-E~~~~~~~~~~~E~~av~~~l~  159 (346)
                      .+++.+++ +.|.+.|+|.|+.+    .     ++ +.++++++.+++.|.++.+|+ |+.+.      .+ ..+....+
T Consensus       186 ~~eL~~~v~~~~gv~g~~~~~~~----~-----~d-~~l~~i~~lA~~~G~~v~vH~~E~~~~------~~-~~l~~~~~  248 (438)
T PRK07583        186 GERLADLVAEAGGLLGGVTYMNP----D-----LD-AQLDRLFRLARERGLDLDLHVDETGDP------AS-RTLKAVAE  248 (438)
T ss_pred             HHHHHHHHHHcCCEEeCCCCCCC----C-----HH-HHHHHHHHHHHHhCCCcEEeECCCCCc------hH-HHHHHHHH
Confidence            36777665 34347888876531    1     23 789999999999999999999 55432      01 11222221


Q ss_pred             HHHHhCCCCcEEEEccCCH---------HHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHH
Q 019093          160 PLIQRLPQLKVVMEHITTM---------DAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQ  230 (346)
Q Consensus       160 ~~la~~~g~~lhi~HvSt~---------~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~  230 (346)
                      .........++++.|..+.         +.++++++   ..++.-+||...+.....        .....|+.|......
T Consensus       249 ~~~~~G~~~~v~i~H~~~l~~~~~~~~~~~i~~la~---~gv~vv~~P~~~~~l~~~--------~~~~~p~~~~~~~v~  317 (438)
T PRK07583        249 AALRNGFEGKVTCGHCCSLAVQPEEQAQATIALVAE---AGIAIVSLPMCNLYLQDR--------QPGRTPRWRGVTLVH  317 (438)
T ss_pred             HHHHhCCCCCEEEEeccchhcCCHHHHHHHHHHHHH---cCCeEEECcchhhhhcCC--------CcCCCCCCCCcchHH
Confidence            1122223457999998752         45666655   345667889754322111        111245555544444


Q ss_pred             HHHHHHHcCCccEEeecCCCCCCccccccCCCCCC-ccchhHHHHHHHHHHHhcCCHHHHHHHHchhhhhhcCCCC----
Q 019093          231 AVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAG-IYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLPR----  305 (346)
Q Consensus       231 aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G-~~g~e~~lp~l~~~~~~~~~l~~lv~~~s~nPAki~gl~~----  305 (346)
                      .|++   .|.-.+ +|||+.+-       +|.+.| ...++.+..+.. ......+++++.++.+.|||+++|++.    
T Consensus       318 ~l~~---aGV~va-lGtD~~~d-------~~~p~g~~~~~~~~~~a~~-~~~~~~~~~~al~~~T~~~A~~lg~~~~G~i  385 (438)
T PRK07583        318 ELKA---AGIPVA-VASDNCRD-------PFYAYGDHDMLEVFREAVR-ILHLDHPYDDWPAAVTTTPADIMGLPDLGRI  385 (438)
T ss_pred             HHHH---CCCeEE-EEeCCCCC-------CCCCCCCcCHHHHHHHHHH-HHhcCCcHHHHHHHHhHHHHHHcCCCCCCCc
Confidence            4544   487777 99999641       222223 233344333322 111134788999999999999999853    


Q ss_pred             ---CCccEEEEe
Q 019093          306 ---NTSKIKLTK  314 (346)
Q Consensus       306 ---kdAdlvi~d  314 (346)
                         +.|||+|+|
T Consensus       386 ~~G~~ADlvv~d  397 (438)
T PRK07583        386 AVGAPADLVLFK  397 (438)
T ss_pred             CCCCCCCEEEEc
Confidence               279999998

>TIGR01792 urease_alph urease, alpha subunit

Probab=99.63  E-value=6e-15  Score=148.35  Aligned_cols=155  Identities=14%  Similarity=0.087  Sum_probs=103.1

Q ss_pred             eEEecCccccceecCCCccccccccccCCceeEEEe-----CCCCCCCCCcHHHHHH--HHHHHHhhCCCCccEEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIV-----MPNLKPPITTTAAAVA--YRESILKALPASSNFTPLMTL   74 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~g~~~ke~~~s~sGGvTtvv~-----mPnt~p~~~~~~~~~~--~~~~~~~~~~~~vd~~~~~~~   74 (346)
                      ++|+||+||+|||+++..   .......||+||+++     |||+.|...+...+..  +.+.+. ..  .++|++++..
T Consensus       124 kIV~PGlIDtHvH~~~P~---~~~aAl~gGVTTmI~~Gtgp~~~t~pTt~t~~~~~~~~~l~aa~-~~--~in~g~~g~g  197 (567)
T TIGR01792       124 KIVTAGGIDTHVHYISPQ---QVQAALDNGITTLIGGGTGPADGTNATTCTPGPWYLHRMLQAAD-GL--PINFGFTGKG  197 (567)
T ss_pred             CEEEECeEEeecCCCCcc---HHHHHHhCceEEEecCCCccccCCCCcccccchhhHHHHHHHhc-cC--CccEEEEeCC
Confidence            489999999999998621   122345699999999     6788876665443322  223222 22  2888876432


Q ss_pred             EeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHH
Q 019093           75 YLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFI  154 (346)
Q Consensus        75 ~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av  154 (346)
                        . ....+++.++.++| +.+||+|..|       .. +. +.|+++++.++++|.++++|+|...        |.-.+
T Consensus       198 --~-~~~~~~L~e~i~aG-a~gfK~h~~y-------~~-s~-e~L~~al~~A~e~gv~V~iH~ET~~--------E~g~v  256 (567)
T TIGR01792       198 --S-GSGPAALIEQIEAG-ACGLKVHEDW-------GA-TP-AAIDNALSVADEYDVQVAVHTDTLN--------ESGFV  256 (567)
T ss_pred             --c-cchHHHHHHHHHcC-CcEEEeCCCC-------CC-CH-HHHHHHHHHHHHcCCEEEEeCCCcc--------cchHH
Confidence              2 22466788888888 6899998643       22 33 7899999999999999999997542        21112


Q ss_pred             HHHHHHHHHhCCCCcEEEEccCC---HHHHHHHHcc
Q 019093          155 DTILQPLIQRLPQLKVVMEHITT---MDAVKFVESC  187 (346)
Q Consensus       155 ~~~l~~~la~~~g~~lhi~HvSt---~~~l~~i~~a  187 (346)
                      ..    .++++.+.++|++|.-.   ..+=++|+-+
T Consensus       257 e~----t~~a~g~rpIh~~H~~G~g~ghapdi~~~~  288 (567)
T TIGR01792       257 ED----TIAAFKGRTIHTYHTEGAGGGHAPDIIVVV  288 (567)
T ss_pred             HH----HHHHHCCCcchhHhhcCCCCCcHHHHHHHc
Confidence            11    35667789999999874   3334455544

This model describes the urease alpha subunit UreC (designated beta or B chain, UreB in Helicobacter species). Accessory proteins for incorporation of the nickel cofactor are usually found in addition to the urease alpha, beta, and gamma subunits. The trusted cutoff is set above the scores of many reported fragments and of a putative second urease alpha chain in Streptomyces coelicolor.

>PF13147 Amidohydro_4: Amidohydrolase; PDB: 3SFW_B 2FTW_A 2PUZ_B 2GOK_B 3HM7_E 3D6N_A 1XRT_A 1XRF_A 1YNY_B 1K1D_F

Probab=99.63  E-value=1.4e-15  Score=140.74  Aligned_cols=262  Identities=14%  Similarity=0.068  Sum_probs=142.1

Q ss_pred             eEEecCcccccee--cCC---Cccccccccc-----cCCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEE
Q 019093            2 ELTLTQPDDWHLH--LRD---GDLLKAVVPH-----SVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPL   71 (346)
Q Consensus         2 ~~vlPG~ID~HvH--~r~---g~~~ke~~~s-----~sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~   71 (346)
                      ++|+||+||+|+|  +..   +....+...+     ..+|+|++++++++.+     ..+......   .    ..+...
T Consensus         5 ~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~G~tt~~~~~~~~~-----~~~~~~~~~---~----~~~~~~   72 (304)
T PF13147_consen    5 KYVLPGLIDLHVHGPLGRSEDGAPWAEQAAAASAAALAGGVTTVVDMPGTNP-----EELNRARRR---G----AGYPGS   72 (304)
T ss_dssp             SEEEE-EEEEEEECCSSCETTTEEHSSHHHHHHHHHHHTTEEEEEESSSSSH-----HHHHHHHHH---E----SEEEEE
T ss_pred             CEEccceeeeeeCCCcCCCCCCccchhhHHHHHHHHHhCCEeEEecCCCCCc-----hhhHHHHhh---c----cccccc
Confidence            4899999999999  433   2222333222     2499999999876543     211111111   1    222222


Q ss_pred             EEEEeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcC-CcEEEecCCCCCCCCh----
Q 019093           72 MTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQN-MPLLVHGEVTDPIVDI----  146 (346)
Q Consensus        72 ~~~~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g-~~v~vHaE~~~~~~~~----  146 (346)
                      ...  .......++..+.+.....+.++.+.+.      .. +. ..+.+.++.+.+.| ..++.|++.. .....    
T Consensus        73 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  141 (304)
T PF13147_consen   73 GAG--PRGTTIEELEALVDLIAAEGVGFVAAYN------GI-EG-PGLQAAIRAAHRAGVIKVVGHSPAD-GIEGAIAEG  141 (304)
T ss_dssp             CES--CCHHHHHHHHHHHHHHHHTEEEEESSST------HH-HH-HHHHHHHHHHHHHTHEEEEEECHHH-HHHHHHHHH
T ss_pred             ccc--ccccchHHHHHHHHHHhhcCcceeeccc------cC-CH-HHHHHHHHHHHhcCCeeeecccchh-hHHHHHHhc
Confidence            111  1111122333333221122334333210      11 22 56778888888888 4444444433 11000    


Q ss_pred             ----------hhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHcc--CCCeeEEEccchhhccchhhhccCCCC
Q 019093          147 ----------FDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESC--KEGFVAATVTPQHLVLNRNALFQGGLR  214 (346)
Q Consensus       147 ----------~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~a--kg~~vt~Et~ph~L~l~~~~~~~~~~~  214 (346)
                                ...+...+..    .+....+..+++...+.....+.+...  ++...+...    ++.+....    .+
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~----~~  209 (304)
T PF13147_consen  142 LDAMEHILPHEVAEALHLAE----ALAQGAGPGLHCHVASDDATAEGVAIAHGFGLPPTPLH----LLARDAAA----AG  209 (304)
T ss_dssp             HHTTHHSTHHHHHHHHHHHH----HHHHHHTHCEEEEETSSHHHHHHHHHHHHTTHEEEEEE----HHHHHHHH----HG
T ss_pred             ccchhhhhhhhHHHHHHHHH----HhhhccccchhhhhhhhhhhhHHHHHHHhhccccchHH----hhHHHHHh----cC
Confidence                      0112222221    344445677777777766654322222  233333322    22222111    13


Q ss_pred             CceEEeCCCC--ChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHh-cCCHHHHHH
Q 019093          215 PHNYCLPVLK--REIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEE-MGALDKLEA  291 (346)
Q Consensus       215 ~~~k~~PPLR--~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~-~~~l~~lv~  291 (346)
                      ..++++||++  ...++..++++++.|...+ ++|||.|++.+            +-...+..+...++. ..+++++++
T Consensus       210 ~~~~~~p~~~~~~~~~~~~~~~l~~~Gv~~~-l~sD~~~~~~~------------~~~~~~~~~~~~~~~~gl~~~~al~  276 (304)
T PF13147_consen  210 IRFKVLPPLRLDLREDRAALRELLEAGVPVA-LGSDHAPSSTE------------GSGDLLHEAMRLAVRAGLSPEEALR  276 (304)
T ss_dssp             GGGEESSCHHHHTHHHHHHHHHHHHTTSSEE-EEE-BBTTTTT------------CTTTHHHHHHHHHHHTSSTHHHHHH
T ss_pred             ceeeeCCCccccchhhhHHHHHHHhCCCeEE-EEcCCcccccc------------cccccchhhhhHHhhcCCCHHHHHH
Confidence            7899999999  9999999999999999999 99999998644            122344444443444 458999999


Q ss_pred             HHchhhhhhcCC-CCC-------CccEE
Q 019093          292 FTSFNGPDFYGL-PRN-------TSKIK  311 (346)
Q Consensus       292 ~~s~nPAki~gl-~~k-------dAdlv  311 (346)
                      .+|.|||++||| +++       +||||
T Consensus       277 ~~T~~pA~~lgl~~~~G~i~~G~~ADlv  304 (304)
T PF13147_consen  277 AATSNPARILGLDDDKGSIAPGKDADLV  304 (304)
T ss_dssp             HHTHHHHHHTTBTTTSSSTSTTSB-EEE
T ss_pred             HHHHHHHHHhCCCCCCccCCCCCCCCcC
Confidence            999999999998 432       88986

...

>cd01299 Met_dep_hydrolase_A Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site

Probab=99.62  E-value=1.2e-14  Score=139.55  Aligned_cols=187  Identities=16%  Similarity=0.166  Sum_probs=105.0

Q ss_pred             HHHHHHHHcCCeeEEEEeecCCccCCC-----CCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHH
Q 019093           83 DEIKLARKTGVVFAVKLYPAGATTNSQ-----DGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTI  157 (346)
Q Consensus        83 ~el~~l~~~G~v~~~Kif~~~~~~~~~-----~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~  157 (346)
                      .++.++.+.| +..+|+|+.+......     ..+ +. +.+.++++.+++.|.++.+||+...           .+...
T Consensus       124 ~~v~~~~~~G-~~~iK~~~~g~~~~~~~~~~~~~~-~~-e~l~~~~~~A~~~g~~v~~H~~~~~-----------~i~~~  189 (342)
T cd01299         124 AAVREQLRRG-ADQIKIMATGGVLSPGDPPPDTQF-SE-EELRAIVDEAHKAGLYVAAHAYGAE-----------AIRRA  189 (342)
T ss_pred             HHHHHHHHhC-CCEEEEeccCCcCCCCCCCcccCc-CH-HHHHHHHHHHHHcCCEEEEEeCCHH-----------HHHHH
Confidence            3567777888 7999999864211110     123 34 7899999999999999999998631           22222


Q ss_pred             HHHHHHhCCCCcEEEEccC--CHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCC-------hhh
Q 019093          158 LQPLIQRLPQLKVVMEHIT--TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKR-------EIH  228 (346)
Q Consensus       158 l~~~la~~~g~~lhi~HvS--t~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~-------~~d  228 (346)
                      +      ..|.. -|.|..  +.+.++.+++.   .++...||.............+       .|+-..       ...
T Consensus       190 l------~~G~~-~i~H~~~~~~~~~~~l~~~---g~~~~~t~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~  252 (342)
T cd01299         190 I------RAGVD-TIEHGFLIDDETIELMKEK---GIFLVPTLATYEALAAEGAAPG-------LPADSAEKVALVLEAG  252 (342)
T ss_pred             H------HcCCC-EEeecCCCCHHHHHHHHHC---CcEEeCcHHHHHHHHhhccccC-------CCHHHHHHHHHHHHHH
Confidence            2      12443 367765  66777777653   4556677754321100000000       111000       011


Q ss_pred             HHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHchhhhhhcCCC-C--
Q 019093          229 RQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLP-R--  305 (346)
Q Consensus       229 ~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~~~~l~~lv~~~s~nPAki~gl~-~--  305 (346)
                      ...+.+....|. .+.++||.....         .+|..-.+. +.+   ......+..++++..+.|||+++|+. +  
T Consensus       253 ~~~~~~l~~~Gv-~v~~GTD~~~~~---------~~~~~~~~e-~~~---~~~~~~~~~~al~~~T~~~a~~~g~~~~~G  318 (342)
T cd01299         253 RDALRRAHKAGV-KIAFGTDAGFPV---------PPHGWNARE-LEL---LVKAGGTPAEALRAATANAAELLGLSDELG  318 (342)
T ss_pred             HHHHHHHHHcCC-eEEEecCCCCCC---------CchhHHHHH-HHH---HHHhCCCHHHHHHHHHHHHHHHhCccCCcc
Confidence            223334455564 444899964200         011110110 111   11223588999999999999999983 2  


Q ss_pred             -----CCccEEEEe
Q 019093          306 -----NTSKIKLTK  314 (346)
Q Consensus       306 -----kdAdlvi~d  314 (346)
                           |.|||+|+|
T Consensus       319 ~i~~G~~ADlvvl~  332 (342)
T cd01299         319 VIEAGKLADLLVVD  332 (342)
T ss_pred             eECCCCcCCEEEEC
Confidence                 279999998

The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.

>cd01292 metallo-dependent_hydrolases Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site

Probab=99.62  E-value=2.5e-14  Score=130.91  Aligned_cols=218  Identities=20%  Similarity=0.231  Sum_probs=131.3

Q ss_pred             CCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCC------HH----HHHHHHHcCCeeEEE
Q 019093           29 VSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTS------PD----EIKLARKTGVVFAVK   98 (346)
Q Consensus        29 sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~------~~----el~~l~~~G~v~~~K   98 (346)
                      .+|+||++++++..+.....+.++...+.+.+...  +.+.+..++  .+...      .+    ++.++.+.| +.++|
T Consensus        46 ~~Gvttv~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~-~~gi~  120 (275)
T cd01292          46 AGGVTTVVDMGSTPPPTTTKAAIEAVAEAARASAG--IRVVLGLGI--PGVPAAVDEDAEALLLELLRRGLELG-AVGLK  120 (275)
T ss_pred             hcCceEEEeeEeecCccccchHHHHHHHHHHHhcC--eeeEEeccC--CCCccccchhHHHHHHHHHHHHHhcC-CeeEe
Confidence            39999999998776655444444555554443211  344333333  22111      22    233332336 78999


Q ss_pred             EeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCC-
Q 019093           99 LYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITT-  177 (346)
Q Consensus        99 if~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt-  177 (346)
                      ++..+.    .....+  +.++++++.+++.|.++.+|+.+....       ...+.+++  .+... +.++++.|.+. 
T Consensus       121 ~~~~~~----~~~~~~--~~~~~~~~~a~~~~~~i~~H~~~~~~~-------~~~~~~~~--~~~~~-~~~~~~~H~~~~  184 (275)
T cd01292         121 LAGPYT----ATGLSD--ESLRRVLEEARKLGLPVVIHAGELPDP-------TRALEDLV--ALLRL-GGRVVIGHVSHL  184 (275)
T ss_pred             eCCCCC----CCCCCc--HHHHHHHHHHHHcCCeEEEeeCCcccC-------ccCHHHHH--HHHhc-CCCEEEECCccC
Confidence            875321    111223  789999999999999999999876420       01123333  22322 78999999997 


Q ss_pred             -HHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccc
Q 019093          178 -MDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGR  256 (346)
Q Consensus       178 -~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~  256 (346)
                       .+.++.+++.   .+++++||+++.++.                  +....+..+.+.+..|...+ ++||+.+...  
T Consensus       185 ~~~~~~~~~~~---g~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~g~~~~-lgTD~~~~~~--  240 (275)
T cd01292         185 DPELLELLKEA---GVSLEVCPLSNYLLG------------------RDGEGAEALRRLLELGIRVT-LGTDGPPHPL--  240 (275)
T ss_pred             CHHHHHHHHHc---CCeEEECCccccccc------------------CCcCCcccHHHHHHCCCcEE-EecCCCCCCC--
Confidence             7888888763   688999998776543                  11223445677788898888 9999966530  


Q ss_pred             cccCCCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHchhhhhh
Q 019093          257 KECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDF  300 (346)
Q Consensus       257 K~~~~~~~G~~g~e~~lp~l~~~~~~~~~l~~lv~~~s~nPAki  300 (346)
                             +  ..+-..+-.+........+++++.++++.||||.
T Consensus       241 -------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~t~n~a~~  275 (275)
T cd01292         241 -------G--TDLLALLRLLLKVLRLGLSLEEALRLATINPARA  275 (275)
T ss_pred             -------C--CCHHHHHHHHHHHHhcCCCHHHHHHHHhccccCC
Confidence                   0  1111111111111111248999999999999984

The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The family includes urease alpha, adenosine deaminase, phosphotriesterase dihydroorotases, allantoinases, hydantoinases, AMP-, adenine and cytosine deaminases, imidazolonepropionase, aryldialkylphosphatase, chlorohydrolases, formylmethanofuran dehydrogenases and others.

>PLN02303 urease

Probab=99.59  E-value=7.6e-15  Score=151.22  Aligned_cols=119  Identities=18%  Similarity=0.181  Sum_probs=88.6

Q ss_pred             eEEecCccccceecCCCccccccccccC-----CceeEEEeCCCCCCCCC--cHHHHHHHHHHHHhhCCCCccEEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRDGDLLKAVVPHSV-----SHYGRAIVMPNLKPPIT--TTAAAVAYRESILKALPASSNFTPLMTL   74 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~--~~~~~~~~~~~~~~~~~~~vd~~~~~~~   74 (346)
                      ++|+||+||+|||++++...++++.+|+     ||+|++   |||.|.+.  +++.++.+.+..+. ..  +||++++..
T Consensus       394 lIVtPG~ID~HVHf~~Pg~~~eaLasGVTTai~GGtgp~---pnT~ptt~t~g~e~I~~~L~aa~~-~p--vn~Gf~gkG  467 (837)
T PLN02303        394 MIVTAGGIDCHVHFICPQLATEAIASGITTLVGGGTGPA---HGTCATTCTPAPSHMKLMLQSTDD-LP--LNFGFTGKG  467 (837)
T ss_pred             CEEEeCEEEeecCCCCCcHHHHHHHHhHHHHHhcCCCCC---CcccCcCCCCCHHHHHHHHHhccc-CC--CcEEEEccC
Confidence            4899999999999998322367777764     677663   88888764  57777766653322 23  899987643


Q ss_pred             EeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCC
Q 019093           75 YLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEV  139 (346)
Q Consensus        75 ~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~  139 (346)
                        +. .+++++.++.++| +.+||.+..+       +++ . ..+.+++++++++|.++++||||
T Consensus       468 --~~-s~l~eL~elieaG-a~GfK~h~d~-------gvT-p-elL~raLe~AkelGVpVaIHAEd  519 (837)
T PLN02303        468 --NT-AKPEGLHEIIKAG-AMGLKLHEDW-------GTT-P-AAIDNCLDVAEEYDIQVTIHTDT  519 (837)
T ss_pred             --cc-cCHHHHHHHHHcC-cEEEEECCCC-------CCC-H-HHHHHHHHHHHHcCCEEEEecCc
Confidence              22 3678899998889 7899987422       232 3 78999999999999999999998

>TIGR01975 isoAsp_dipep isoaspartyl dipeptidase IadA

Probab=99.59  E-value=1.6e-13  Score=134.09  Aligned_cols=271  Identities=11%  Similarity=0.061  Sum_probs=147.8

Q ss_pred             eEEecCccccceecCC-Cccc-----cccccc----cCCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-GDLL-----KAVVPH----SVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPL   71 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~-----ke~~~s----~sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~   71 (346)
                      .+|+||+||.|+|+-. +.+.     .+.+ +    ...|+|||++|-.+..-....+.+.++.+.+....   +.-..+
T Consensus        52 ~~v~PGlID~HvH~~~gg~~~~~~~~~~e~-~~~e~l~~GvTTv~d~~g~~~~~~~~~~~~a~~~al~~~G---ir~~~~  127 (389)
T TIGR01975        52 MIAVPGFIDQHVHIIGGGGEGGPTTRTPEL-TLSDITKGGVTTVVGLLGTDGITRHMESLLAKARALEEEG---ISCYML  127 (389)
T ss_pred             CEEccCEeehhhccccccccCCCccCCHHH-HHHHHHhCCcEEEecCcccCccccChhhHHHHHHHHHHhC---CEEEEE
Confidence            4799999999999854 2111     1111 1    23899999999644333333332333333222211   222111


Q ss_pred             EEEE-e-CCCCCHHHHHHHHHcCCeeEEE-EeecCCccCCCCCccChHHHHHHHHHHhHHcC----Cc--EEEecCCCCC
Q 019093           72 MTLY-L-TDTTSPDEIKLARKTGVVFAVK-LYPAGATTNSQDGVTDLFGKCVHVLEEMVEQN----MP--LLVHGEVTDP  142 (346)
Q Consensus        72 ~~~~-~-~~~~~~~el~~l~~~G~v~~~K-if~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g----~~--v~vHaE~~~~  142 (346)
                      -+.+ + .+....++..++..--.|.|+| +=+..+.+ +.   ... ..|.++-+.++..|    ++  +++|..|...
T Consensus       128 ~g~~~~p~~t~t~~~~~d~~~~d~iiG~~~ia~sd~r~-~~---~~~-~~l~~~~~~~~~~g~~~~~~g~~~vH~g~~~~  202 (389)
T TIGR01975       128 TGAYHVPSRTITGSVESDLLLIDKVIGVGEIAISDHRS-AQ---PTV-EHLTNMAAEARVGGLLGGKPGIVNFHVGDSKR  202 (389)
T ss_pred             cccccCCCcccccchhhheeeehhhcccceEEEccCcC-CC---CCH-HHHHHHHHHHHHHHHhcCCCcEEEEEeCCchh
Confidence            1111 0 0111112222222111267885 76643222 11   233 67888888888887    78  9999998642


Q ss_pred             CCChhhhHHHHHHHHHHHHHHhCCCCcEEEE---ccC-C----HHHHHHHHccCCCeeEEEccchhhccchhhhccCCCC
Q 019093          143 IVDIFDREKVFIDTILQPLIQRLPQLKVVME---HIT-T----MDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLR  214 (346)
Q Consensus       143 ~~~~~~~E~~av~~~l~~~la~~~g~~lhi~---HvS-t----~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~  214 (346)
                                .+..++  .+.+..+.|+|.-   |+. +    .++++.+++.--.++++..+|.+|-            
T Consensus       203 ----------~l~~l~--~~~~~~di~~~~f~pth~~r~~~l~~~~i~~~~~gg~iDv~~~~~~~~l~------------  258 (389)
T TIGR01975       203 ----------ALQPIY--ELVENTDVPITQFLPTHINRNVPLFEAGLEFAKKGGTIDLTSSIDPQFRK------------  258 (389)
T ss_pred             ----------hHHHHH--HHHHhcCCChhheecCccCCCHHHHHHHHHHHHhCCcEEEeCCCCccchh------------
Confidence                      233444  4566666665554   444 3    2344443321114455333332111            


Q ss_pred             CceEEeCCCCChhhHHHHHHHHHcCC-cc--EEeecCCC---CCCccccccCCCCCCccchhHHHHHHHHHHHh-cCCHH
Q 019093          215 PHNYCLPVLKREIHRQAVVSAVTSGS-RK--FFLGTDSA---PHERGRKECACGCAGIYNAPVALSLYAKVFEE-MGALD  287 (346)
Q Consensus       215 ~~~k~~PPLR~~~d~~aL~~al~~G~-Id--~~i~SDHa---P~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~-~~~l~  287 (346)
                           .+.   ....+++-.++..|. +|  + ++||..   |+..++.  ..-..|+.+++.++..+...... ..+++
T Consensus       259 -----~~~---~~~~~~~~~~~~~Gv~~~~i~-isSD~~gs~p~~~~~g--~~~~~g~g~~~sl~~~~~~lv~~g~ls~~  327 (389)
T TIGR01975       259 -----EGE---VAPAEGIKKALEAGVPLEKVT-FSSDGNGSQPFFDENG--ELTGLGVGSFETLFEEVREAVKDGDVPLE  327 (389)
T ss_pred             -----ccc---cChHHHHHHHHHcCCCcceEE-EEeCCCCCCCcccccc--ccccCCcCcHHHHHHHHHHHHHhCCCCHH
Confidence                 010   122345666777784 55  6 899974   3322211  11235888888888777654444 36899


Q ss_pred             HHHHHHchhhhhhcCCCCC-------CccEEEEecc
Q 019093          288 KLEAFTSFNGPDFYGLPRN-------TSKIKLTKIP  316 (346)
Q Consensus       288 ~lv~~~s~nPAki~gl~~k-------dAdlvi~d~~  316 (346)
                      ++++.++.|||+++|++++       +|||+|+|..
T Consensus       328 eal~~~T~npA~~Lgl~~~G~I~~G~~ADlvild~~  363 (389)
T TIGR01975       328 KALRVITSNVAGVLNLTGKGEISPGNDADLVVLDPD  363 (389)
T ss_pred             HHHHHHHHHHHHHhCCCCCCeECCCCcCCEEEEcCC
Confidence            9999999999999999532       8999999833

The L-isoaspartyl derivative of Asp arises non-enzymatically over time as a form of protein damage. In this isomerization, the connectivity of the polypeptide changes to pass through the beta-carboxyl of the side chain. Much but not all of this damage can be repaired by protein-L-isoaspartate (D-aspartate) O-methyltransferase. This model describes the isoaspartyl dipeptidase IadA, apparently one of two such enzymes in E. coli, an enzyme that degrades isoaspartyl dipeptides and may unblock degradation of proteins that cannot be repaired. This model also describes closely related proteins from other species (e.g. Clostridium perfringens, Thermoanaerobacter tengcongensis) that we assume to be equivalent in function. This family shows homology to dihydroorotases.

>PRK07228 N-ethylammeline chlorohydrolase; Provisional

Probab=99.59  E-value=2e-14  Score=143.13  Aligned_cols=158  Identities=12%  Similarity=0.123  Sum_probs=103.3

Q ss_pred             HHHHHHHHHhHHcCCcEEEec-CCCCCCCChhhhHHHHHHH-----HHHHHHH--hCCCCcEEEEccC--CHHHHHHHHc
Q 019093          117 GKCVHVLEEMVEQNMPLLVHG-EVTDPIVDIFDREKVFIDT-----ILQPLIQ--RLPQLKVVMEHIT--TMDAVKFVES  186 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHa-E~~~~~~~~~~~E~~av~~-----~l~~~la--~~~g~~lhi~HvS--t~~~l~~i~~  186 (346)
                      +.+.++++.+++.|+++.+|+ |+..        |..++.+     .++ .+.  ...+.++++.|.+  +.+.++++++
T Consensus       199 ~~l~~~~~~a~~~g~~v~~H~~e~~~--------~~~~~~~~~g~~~~~-~l~~~g~~~~~~~l~H~~~~~~~~~~~~~~  269 (445)
T PRK07228        199 ELLRGVRDLADEYGVRIHTHASENRG--------EIETVEEETGMRNIH-YLDEVGLTGEDLILAHCVWLDEEEREILAE  269 (445)
T ss_pred             HHHHHHHHHHHHcCCcEEEEeCCCHH--------HHHHHHHHhCCCHHH-HHHHCCCCCCCcEEEEEecCCHHHHHHHHH
Confidence            788999999999999999999 4431        1111111     111 222  2457799999999  8889999876


Q ss_pred             cCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCc
Q 019093          187 CKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGI  266 (346)
Q Consensus       187 akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~  266 (346)
                      . |  +..-+||+.      ++..   +            .....+++.+..|.... +||||.|+.... +        
T Consensus       270 ~-g--~~v~~~P~~------~~~~---~------------~~~~p~~~~~~~Gv~v~-lGtD~~~~~~~~-~--------  315 (445)
T PRK07228        270 T-G--THVTHCPSS------NLKL---A------------SGIAPVPDLLERGINVA-LGADGAPCNNTL-D--------  315 (445)
T ss_pred             c-C--CeEEEChHH------hhhc---c------------cccCcHHHHHHCCCeEE-EcCCCCccCCCc-c--------
Confidence            4 3  445589962      1110   0            11234788899999999 999997763211 0        


Q ss_pred             cchhHHHHHHHHHHH----hcCCHHHHHHHHchhhhhhcCC-CC-C------CccEEEEe-cce
Q 019093          267 YNAPVALSLYAKVFE----EMGALDKLEAFTSFNGPDFYGL-PR-N------TSKIKLTK-IPW  317 (346)
Q Consensus       267 ~g~e~~lp~l~~~~~----~~~~l~~lv~~~s~nPAki~gl-~~-k------dAdlvi~d-~~~  317 (346)
                      +-.+..+.+++....    ...++++++++++.|||+++|+ +. +      .|||+|+| ...
T Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~s~~~al~~~T~~~A~~lg~~~~~G~l~~G~~ADlvvld~~~~  379 (445)
T PRK07228        316 PFTEMRQAALIQKVDRLGPTAMPARTVFEMATLGGAKAAGFEDEIGSLEEGKKADLAILDLDGL  379 (445)
T ss_pred             HHHHHHHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHhCCCCCccccCCCCccCEEEEcCCCc
Confidence            001334444433221    1347899999999999999999 33 2      89999999 443

>TIGR03583 EF_0837 probable amidohydrolase EF_0837/AHA_3915

Probab=99.56  E-value=5.7e-13  Score=129.39  Aligned_cols=132  Identities=11%  Similarity=0.055  Sum_probs=72.0

Q ss_pred             eEEecCccccceecCC-Cccccccccc--cCCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCC
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPH--SVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTD   78 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s--~sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~   78 (346)
                      ++|+||+||.|+|+++ +...++++..  ..+|+|++++||++.+  ++.+.+....++........+++..++..  .+
T Consensus        46 ~~l~PG~ID~H~H~~~~~~~~~~~~~~~a~~~GvTt~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~G~~--~~  121 (365)
T TIGR03583        46 TYVSAGWIDDHTHCFPKSALYYDEPDEIGVKTGVTTVVDAGSTGA--DDIDDFYRLAQQAKTNVFALLNISRIGLV--AQ  121 (365)
T ss_pred             eEEecCEEEeeeccCCCcccccCCHhHhhhcCceeEEEeCCCCCC--CCHHHHHHHHHhhCCcEEEEeeehhcccc--Ch
Confidence            5899999999999986 4444555433  3489999999997654  44444443332211000000222222211  11


Q ss_pred             CC-------CHHHHHHHHH--cCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCC
Q 019093           79 TT-------SPDEIKLARK--TGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTD  141 (346)
Q Consensus        79 ~~-------~~~el~~l~~--~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~  141 (346)
                      ..       ..+++.++.+  .+.+++||.+|+.. .....++++  ..+.+.+... +.|+++++|+++..
T Consensus       122 ~~~~~~~~~~~~~l~~~~~~~~~~vv~~~~~~t~~-~i~E~gl~~--~~~~~~l~~~-~~~~pv~vH~~~a~  189 (365)
T TIGR03583       122 DELADLSNLDASAVKQAVERYPDFIVGLKARMSKS-VVGDNGIEP--LEIAKQIQQE-NLELPLMVHIGSAP  189 (365)
T ss_pred             hhhhChHHhHHHHHHHHHHhCcCcEEEEEEeeccc-ccccCCcCH--HHHHHHHHHh-cCCCcEEEEeCCCc
Confidence            10       1123443333  22388999998621 112234434  3444445444 68999999999864

Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. These proteins resemble aminohydrolases (see pfam01979), including dihydroorotases. The function is unknown.

>PF01979 Amidohydro_1: Amidohydrolase family; InterPro: IPR006680 This group of enzymes represents a large metal dependent hydrolase superfamily []

Probab=99.40  E-value=1.7e-13  Score=130.14  Aligned_cols=111  Identities=13%  Similarity=0.124  Sum_probs=67.5

Q ss_pred             chhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCC-C-CCCccchhHHHHH
Q 019093          198 PQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECAC-G-CAGIYNAPVALSL  275 (346)
Q Consensus       198 ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~-~-~~G~~g~e~~lp~  275 (346)
                      .|+.++ ++.+...  ...+..+++++ .++.+.| .....+.+.+ ..+++.+.....|.... + ..|+.++....+-
T Consensus       193 ~~~~~~-~~~~~~~--~~~~~h~~~~~-~~~~~~l-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  266 (333)
T PF01979_consen  193 DHLGLL-EEAIDDG--VDLIAHGTHLS-DEEIELL-KETGIGIIHC-PISNDSAPHKPGKAIMMDGTAEGIYGLGSGGAP  266 (333)
T ss_dssp             HHHHSC-HHHHHHH--CEEEEEHTTSE-HHHHHHH-HHHTHEEEEE-HHHHHHHHHHTTHHSETTBSBTSBSCTTHHHHH
T ss_pred             ccchhh-hhhcccc--cceeeccccCC-HHHhhhh-hccCCccccc-cchhhhhccccccccccchhccccccccccccc
Confidence            666777 5554432  35677788888 3355545 5566677777 56666533333332111 2 2355556555554


Q ss_pred             HHHHHHhc--------------------CCHHHHHHHHchhhhhhcCC-CCC-------CccEEEEe
Q 019093          276 YAKVFEEM--------------------GALDKLEAFTSFNGPDFYGL-PRN-------TSKIKLTK  314 (346)
Q Consensus       276 l~~~~~~~--------------------~~l~~lv~~~s~nPAki~gl-~~k-------dAdlvi~d  314 (346)
                      ++..+.+.                    .+++++++++|.||||+||+ +++       +|||||||
T Consensus       267 ~~~~~~~~g~~lgtDg~~~~l~~~~~~~~~~~~~l~~aT~n~Ak~lg~~~~~G~i~~G~~ADlvv~D  333 (333)
T PF01979_consen  267 LFRMLDKMGVNLGTDGVAEELKLFVRLGISPEEALKMATINPAKILGLDDDKGSIEPGKDADLVVLD  333 (333)
T ss_dssp             HHHHHHCTTHEETTCTTCHHHHHHHHHHSHHHHHHHHHTHHHHHHTTSTTTSSSSSTTSB--EEEEE
T ss_pred             hhhhhhhcccccccccccccccccccccccccccccccchhHHHHcCCCCCEEEeCcCCCcCEEEeC
Confidence            44433331                    67899999999999999999 442       89999998

The family includes adenine deaminase (3.5.4.2 from EC) that hydrolyses adenine to form hypoxanthine and ammonia. The adenine deaminase reaction is important for adenine utilization as a purine and also as a nitrogen source []. This family also includes dihydroorotase and N-acetylglucosamine-6-phosphate deacetylases (3.5.1.25 from EC). These enzymes catalyse the reaction: N-acetyl-D-glucosamine 6-phosphate + H2O = D-glucosamine 6-phosphate + acetateThis family includes dihydroorotase and urease which belong to MEROPS peptidase family M38 (beta-aspartyl dipeptidase, clan MJ), where they are classified as non-peptidase homologs. ; GO: 0016787 hydrolase activity; PDB: 1O12_A 2KAU_C 1FWD_C 1A5M_C 1FWC_C 1FWI_C 1EJV_C 1FWH_C 1A5L_C 1KRA_C ....

>cd00854 NagA N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate

Probab=99.37  E-value=8.9e-12  Score=121.49  Aligned_cols=266  Identities=14%  Similarity=0.115  Sum_probs=144.2

Q ss_pred             eEEecCccccceecCCC--cc--cccccccc-----CCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEE
Q 019093            2 ELTLTQPDDWHLHLRDG--DL--LKAVVPHS-----VSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLM   72 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~g--~~--~ke~~~s~-----sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~   72 (346)
                      ++|+||+||+|+|.++|  ..  .+|++.+.     .+||||+++|+++.++....+.+..+++..++.. ....+++|.
T Consensus        47 ~~l~PG~iD~H~H~~~g~~~~~~~~e~~~~~~~~~~~~GvTtv~~t~~t~~~~~~~~~l~~~~~~~~~~~-g~~~~g~hl  125 (374)
T cd00854          47 QYLVPGFIDIHIHGGGGADFMDGTAEALKTIAEALAKHGTTSFLPTTVTAPPEEIAKALAAIAEAIAEGQ-GAEILGIHL  125 (374)
T ss_pred             CEecccEEEeeecccCCCCCCCCCHHHHHHHHHHHHccCcceeeccccCCCHHHHHHHHHHHHHHhhcCC-CCeeEEEee
Confidence            47999999999999762  22  35676654     3999999999998887766676776666554321 013454443


Q ss_pred             EE-EeCCC---C---------CHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEE-EecC
Q 019093           73 TL-YLTDT---T---------SPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLL-VHGE  138 (346)
Q Consensus        73 ~~-~~~~~---~---------~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~-vHaE  138 (346)
                      .- ++++.   .         ..+++.++.+.+ .-.+|+++-   ..      +. ..-.++++++++.|+++. -|..
T Consensus       126 eGP~~~~~~~g~h~~~~~~~~~~~~~~~~~~~~-~~~ik~~tl---aP------E~-~~~~~~i~~~~~~gi~v~~GH~~  194 (374)
T cd00854         126 EGPFISPEKKGAHPPEYLRAPDPEELKKWLEAA-GGLIKLVTL---AP------EL-DGALELIRYLVERGIIVSIGHSD  194 (374)
T ss_pred             ecCccCcccCCCCCHHHcCCcCHHHHHHHHHhc-CCCEEEEEE---CC------CC-CChHHHHHHHHHCCeEEEeeCCc
Confidence            32 22211   1         234677777655 245788742   11      11 112578888999999984 7765


Q ss_pred             CCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccCC--------CeeEEEccchhhccchhhhcc
Q 019093          139 VTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKE--------GFVAATVTPQHLVLNRNALFQ  210 (346)
Q Consensus       139 ~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~akg--------~~vt~Et~ph~L~l~~~~~~~  210 (346)
                      .. .         ..+.      -|...|.+. +.|+.....-.. .+..|        ..++||...|-          
T Consensus       195 a~-~---------~~~~------~a~~~G~~~-~tH~~n~m~~~~-~r~~~~~~a~l~~~~~~~~li~dg----------  246 (374)
T cd00854         195 AT-Y---------EQAV------AAFEAGATH-VTHLFNAMSPLH-HREPGVVGAALSDDDVYAELIADG----------  246 (374)
T ss_pred             CC-H---------HHHH------HHHHcCCCe-eeECCCCCCCcC-CCCCcHHHHhhcCCCCeEEEEcCC----------
Confidence            22 1         1111      222346653 788754222110 11111        12444433321          


Q ss_pred             CCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCc--------ccc-----ccCCC-CCC-ccchhHHHHH
Q 019093          211 GGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHER--------GRK-----ECACG-CAG-IYNAPVALSL  275 (346)
Q Consensus       211 ~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~--------~~K-----~~~~~-~~G-~~g~e~~lp~  275 (346)
                            ..+.     .++...+++..  |.=.+++.||.....-        ..+     +.... ..| +.|-.+.|.-
T Consensus       247 ------~Hv~-----~~~~~~~~r~~--g~~~~~lvtD~~~~~G~~~g~y~~~~~~~~~~~~~~~~~~g~laG~~~~l~~  313 (374)
T cd00854         247 ------IHVH-----PAAVRLAYRAK--GADKIVLVTDAMAAAGLPDGEYELGGQTVTVKDGVARLADGTLAGSTLTMDQ  313 (374)
T ss_pred             ------CcCC-----HHHHHHHHHhc--CCCcEEEEeccccccCCCCCeEEECCEEEEEECCEEEcCCCCeeehHhhHHH
Confidence                  1122     25555666654  3223335688522211        110     00000 012 3333333333


Q ss_pred             HHHHHHh--cCCHHHHHHHHchhhhhhcCCCC--C------CccEEEEecceeec
Q 019093          276 YAKVFEE--MGALDKLEAFTSFNGPDFYGLPR--N------TSKIKLTKIPWKVP  320 (346)
Q Consensus       276 l~~~~~~--~~~l~~lv~~~s~nPAki~gl~~--k------dAdlvi~d~~~~v~  320 (346)
                      ....+++  ..++++++++.+.|||+++|++.  +      .|||+++|..+.|.
T Consensus       314 ~~~~l~~~~~l~~~~al~~aT~npA~~lg~~~~~G~i~~G~~ADlvv~d~~~~v~  368 (374)
T cd00854         314 AVRNMVKWGGCPLEEAVRMASLNPAKLLGLDDRKGSLKPGKDADLVVLDDDLNVK  368 (374)
T ss_pred             HHHHHHHhhCCCHHHHHHHHhHHHHHHcCCCCCcCCcCCCCcCCEEEECCCCcEE
Confidence            3332333  24899999999999999999952  2      79999999655553

This is the first committed step in the biosynthetic pathway to amino-sugar-nucleotides, which is needed for cell wall peptidoglycan and teichoic acid biosynthesis. Deacetylation of N-acetylglucosamine is also important in lipopolysaccharide synthesis and cell wall recycling.

>cd01296 Imidazolone-5PH Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third step in the histidine degradation pathway, the hydrolysis of (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to N-formimidoyl-L-glutamate

Probab=99.36  E-value=9.3e-11  Score=113.86  Aligned_cols=159  Identities=14%  Similarity=0.135  Sum_probs=99.4

Q ss_pred             eeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCc--EE
Q 019093           94 VFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLK--VV  171 (346)
Q Consensus        94 v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~--lh  171 (346)
                      +.++|++...       +..+. +.+.++++.+++.|.++.+|+.......        .+....      ..|..  .|
T Consensus       178 ~~~~~~~~~~-------~~~~~-~~~~~~~~~A~~~g~~v~~H~~e~~~~~--------~~~~~~------~~g~~~i~H  235 (371)
T cd01296         178 ADFCDVFCEK-------GAFSL-EQSRRILEAAKEAGLPVKIHADELSNIG--------GAELAA------ELGALSADH  235 (371)
T ss_pred             CCEEEEeecC-------CccCH-HHHHHHHHHHHHCCCeEEEEEcCcCCCC--------HHHHHH------HcCCCeeHH
Confidence            6788887431       11234 7889999999999999999997543100        111111      12322  24


Q ss_pred             EEccCCHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCC
Q 019093          172 MEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAP  251 (346)
Q Consensus       172 i~HvSt~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP  251 (346)
                      ..|+ +.+.++.+++.   .+.+.+||...+..       +.+     .||+         .+.+..|.... ++|||.|
T Consensus       236 ~~~~-~~~~i~~la~~---g~~v~~~P~~~~~l-------~~~-----~~~~---------~~l~~~Gv~v~-lgsD~~p  289 (371)
T cd01296         236 LEHT-SDEGIAALAEA---GTVAVLLPGTAFSL-------RET-----YPPA---------RKLIDAGVPVA-LGTDFNP  289 (371)
T ss_pred             hcCC-CHHHHHHHHHc---CCeEEEChHHHHHh-------CCC-----CCCH---------HHHHHCCCcEE-EecCCCC
Confidence            4555 46777777753   46778888643221       111     4554         35677798888 8999966


Q ss_pred             CCccccccCCCCCCccchhHHHHHHHH-HH-HhcCCHHHHHHHHchhhhhhcCCC-C-C------CccEEEEe
Q 019093          252 HERGRKECACGCAGIYNAPVALSLYAK-VF-EEMGALDKLEAFTSFNGPDFYGLP-R-N------TSKIKLTK  314 (346)
Q Consensus       252 ~~~~~K~~~~~~~G~~g~e~~lp~l~~-~~-~~~~~l~~lv~~~s~nPAki~gl~-~-k------dAdlvi~d  314 (346)
                      +..             + ...++..+. .. ..+.++++++++++.|||+++|+. + +      .|||+|+|
T Consensus       290 ~~~-------------~-~~~l~~~~~~~~~~~~l~~~~al~~aT~~~A~~lg~~~~~G~i~~G~~ADlvv~d  348 (371)
T cd01296         290 GSS-------------P-TSSMPLVMHLACRLMRMTPEEALTAATINAAAALGLGETVGSLEVGKQADLVILD  348 (371)
T ss_pred             CCC-------------h-HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCCcCEEEEC
Confidence            531             0 111222222 22 235689999999999999999994 3 2      89999999

In bacteria, the enzyme is part of histidine utilization (hut) operon.

>cd01304 FMDH_A Formylmethanofuran dehydrogenase (FMDH) subunit A; Methanogenic bacteria and archea derive the energy for autotrophic growth from methanogenesis, the reduction of CO2 with molecular hydrogen as the electron donor

Probab=99.35  E-value=2e-10  Score=114.84  Aligned_cols=43  Identities=16%  Similarity=0.146  Sum_probs=34.3

Q ss_pred             CCHHHHHHHHchhhhhhcCCC-CC------CccEEEEe-cceeecCCcccc
Q 019093          284 GALDKLEAFTSFNGPDFYGLP-RN------TSKIKLTK-IPWKVPEAFSFS  326 (346)
Q Consensus       284 ~~l~~lv~~~s~nPAki~gl~-~k------dAdlvi~d-~~~~v~~~~~~s  326 (346)
                      .+++++++++|.||||+|||+ ++      +|||+|+| .+.+++.+++.+
T Consensus       427 LSLeei~~mtT~nPAKiLGL~~kG~L~~G~~ADLvIfD~n~~~v~~~dl~s  477 (541)
T cd01304         427 YSLYEIAIMTRAGPAKLLGLSDKGHLGVGADADIAIYDDDPDQVDPSDYEK  477 (541)
T ss_pred             CCHHHHHHHHHHHHHHHhCCCCCCccCCCCcCCEEEEeCCcCccCchhhcC
Confidence            379999999999999999994 32      89999999 554776655543

FMDH catalyzes the first step in methanogenesis, the formyl-methanofuran synthesis. In this step, CO2 is bound to methanofuran and subsequently reduced to the formyl state with electrons derived from hydrogen.

>cd01306 PhnM PhnM is believed to be a subunit of the membrane associated C-P lyase complex

Probab=99.31  E-value=7.4e-10  Score=105.59  Aligned_cols=271  Identities=13%  Similarity=0.026  Sum_probs=140.2

Q ss_pred             ecCccccceecCC-Cccc--ccccc--c---------cCCceeEEEeCC---CCCCCCCcHHHHHHHHHHHHhh---CCC
Q 019093            5 LTQPDDWHLHLRD-GDLL--KAVVP--H---------SVSHYGRAIVMP---NLKPPITTTAAAVAYRESILKA---LPA   64 (346)
Q Consensus         5 lPG~ID~HvH~r~-g~~~--ke~~~--s---------~sGGvTtvv~mP---nt~p~~~~~~~~~~~~~~~~~~---~~~   64 (346)
                      |||+||+|+=-=| -...  .-.|.  .         .+-||||+++--   ...+.....+......+.+...   ...
T Consensus         1 lPG~vdlH~D~~E~~~~PRp~v~~~~~~a~~~~d~~~~a~GiTT~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (325)
T cd01306           1 LPGLIDLHTDNLEKHVMPRPGVDWPMDIALAAHDRQLAAAGITTVFDALSFGDEEGGRRRLRNLRKLIDAIRELHARGVL   80 (325)
T ss_pred             CCCeEEecCcchhcccCCCCCCCCCHHHHHHHHHHHHHhcCcccceeeeEeccccCCcccHHHHHHHHHHHHHhhhCCcc
Confidence            7999999983211 0111  11121  1         237999998831   1222222344444443333221   111


Q ss_pred             CccEEEEEEEEeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHh-HHcCCcEEEecCCCCCC
Q 019093           65 SSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEM-VEQNMPLLVHGEVTDPI  143 (346)
Q Consensus        65 ~vd~~~~~~~~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~-~~~g~~v~vHaE~~~~~  143 (346)
                      .+|-.+|.-.-++.....+++.++.+.+ -+.+-.||...  .+.....+.    .+.-++. ++.|..   ..|-..++
T Consensus        81 ~~d~~~hlR~E~~~~~~~~~~~~~~~~~-~v~lvs~~dH~--pg~~q~~~~----~~~~~~~~~~~~~~---~~~~~~~~  150 (325)
T cd01306          81 RADHRLHLRCELADPAVLPELESLMADP-RVHLVSLMDHT--PGQRQFRDL----EKYREYYAKKYGLS---DEEVEEAI  150 (325)
T ss_pred             hhhcceEEEEeecCccHHHHHHHHhcCC-CcCEEEEeCCC--CccccccCH----HHHHHHHHhhcCCC---HHHHHHHH
Confidence            2565555443222223466788887777 34666678642  222223332    2222233 223321   11111111


Q ss_pred             CCh--hhhH--HHHHHHHHHHHHHhCCCCcEEEEccC-CHHHHHHHHccCCCeeEEEccchhhccchhhhcc-CCCCCce
Q 019093          144 VDI--FDRE--KVFIDTILQPLIQRLPQLKVVMEHIT-TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQ-GGLRPHN  217 (346)
Q Consensus       144 ~~~--~~~E--~~av~~~l~~~la~~~g~~lhi~HvS-t~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~-~~~~~~~  217 (346)
                      ...  ...+  .+.+..++  .+|+..|+++ ..|.. +.+.++...+. |..+ +|    |+ .+.+.... ...|...
T Consensus       151 ~~~~~~~~~~~~~~~~~iv--~~A~~~gl~v-asH~d~~~~~v~~a~~~-Gv~~-~E----~p-~t~e~a~~a~~~G~~v  220 (325)
T cd01306         151 LERKARAAAYAPANRSELA--ALARARGIPL-ASHDDDTPEHVAEAHEL-GVVI-SE----FP-TTLEAAKAARELGLQT  220 (325)
T ss_pred             HHHHHHhhhcCHHHHHHHH--HHHHHCCCcE-EEecCCChHHHHHHHHC-CCee-cc----CC-CCHHHHHHHHHCCCEE
Confidence            000  0001  12344455  5777788886 55664 56666655543 4433 34    11 23333211 0124455


Q ss_pred             EEeCC--CCCh--hhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHh-cCCHHHHHHH
Q 019093          218 YCLPV--LKRE--IHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEE-MGALDKLEAF  292 (346)
Q Consensus       218 k~~PP--LR~~--~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~-~~~l~~lv~~  292 (346)
                      .+.+|  +|..  .....+++++..|.+++ ++|||.|.+                  .+...+..... ..++++++++
T Consensus       221 v~gapn~lrg~s~~g~~~~~~ll~~Gv~~a-l~SD~~p~s------------------ll~~~~~la~~~gl~l~eAl~~  281 (325)
T cd01306         221 LMGAPNVVRGGSHSGNVSARELAAHGLLDI-LSSDYVPAS------------------LLHAAFRLADLGGWSLPEAVAL  281 (325)
T ss_pred             EecCcccccCccccccHhHHHHHHCCCeEE-EEcCCCcHh------------------HHHHHHHHHHHcCCCHHHHHHH
Confidence            55565  4443  23457889999999999 999997642                  12333333233 3589999999


Q ss_pred             HchhhhhhcCCC-CC------CccEEEEe
Q 019093          293 TSFNGPDFYGLP-RN------TSKIKLTK  314 (346)
Q Consensus       293 ~s~nPAki~gl~-~k------dAdlvi~d  314 (346)
                      .|.|||+++|++ ++      .|||++||
T Consensus       282 aT~nPA~~lGl~d~G~I~~G~~ADlvvvd  310 (325)
T cd01306         282 VSANPARAVGLTDRGSIAPGKRADLILVD  310 (325)
T ss_pred             HhHHHHHHcCCCCCCCcCCCCCCCEEEEe
Confidence            999999999994 32      79999998

C-P lyase is thought to catalyze the direct cleavage of inactivated C-P bonds to yield inorganic phosphate and the corresponding hydrocarbons. It is responsible for cleavage of alkylphosphonates, which are utilized as sole phosphorus sources by many bacteria.

>PRK10027 cryptic adenine deaminase; Provisional

Probab=99.21  E-value=1.8e-09  Score=110.42  Aligned_cols=242  Identities=12%  Similarity=0.049  Sum_probs=135.8

Q ss_pred             eEEecCccccceecCCCcccccccccc--CCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEE--EEeC
Q 019093            2 ELTLTQPDDWHLHLRDGDLLKAVVPHS--VSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMT--LYLT   77 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~g~~~ke~~~s~--sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~--~~~~   77 (346)
                      ++|+||+||.|+|++....+.++|.+.  .||+|||++||++.|.....+.++...+..... .  .++++.+-  .-.+
T Consensus        80 ~~v~PGlIDaHvHiess~~~p~~~a~aal~~G~TtVv~dPhei~nv~g~~gi~~~l~~a~~~-p--~~~~~~~ps~vpa~  156 (588)
T PRK10027         80 ATAVPGFIDAHLHIESSMMTPVTFETATLPRGLTTVICDPHEIVNVMGEAGFAWFARCAEQA-R--QNQYLQVSSCVPAL  156 (588)
T ss_pred             CEEEECeEeccccCCcccCCHhHHHHHHHhCceEEEEcCCCCcccCCCHHHHHHHHHHhhhC-C--CeeEEeecccCcCC
Confidence            489999999999999844467778764  399999999999999998888887776655442 2  45443221  1001


Q ss_pred             C-----C--CCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhH
Q 019093           78 D-----T--TSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDRE  150 (346)
Q Consensus        78 ~-----~--~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E  150 (346)
                      +     +  ...+++.++.+...|.|.==.|.|.    +....|. ..+.++. .+  .|+++-=||=--+         
T Consensus       157 ~~~Et~Ga~~~~~~~~~~l~~~~v~glgEvMn~~----~V~~~d~-~~~~ki~-~~--~~~~idGH~p~l~---------  219 (588)
T PRK10027        157 EGCDVNGASFTLEQMLAWRDHPQVTGLAEMMDYP----GVISGQN-ALLDKLD-AF--RHLTLDGHCPGLG---------  219 (588)
T ss_pred             cccccCCCcCCHHHHHHHhcCCCceeEEeccCcc----ccccCCH-HHHHHHH-Hh--CCCceECCCCCCC---------
Confidence            1     1  1346788887654466664445431    1111243 4455544 33  6888777775322         


Q ss_pred             HHHHHHHHHHHHHhCCCCcEEEEccC--CHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhh
Q 019093          151 KVFIDTILQPLIQRLPQLKVVMEHIT--TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIH  228 (346)
Q Consensus       151 ~~av~~~l~~~la~~~g~~lhi~HvS--t~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d  228 (346)
                          .+.|.-+++  .|+.  =+|-+  -.++++.+|.  |..|.         +      +.  |+..         .|
T Consensus       220 ----g~~L~ay~a--aGi~--sDHE~~t~eea~eklr~--Gm~v~---------i------Re--gS~~---------~n  263 (588)
T PRK10027        220 ----GKELNAYIA--AGIE--NCHESYQLEEGRRKLQL--GMSLM---------I------RE--GSAA---------RN  263 (588)
T ss_pred             ----hHHHHHHHH--cCCC--CCcccCCHHHHHHHHHC--CCEEE---------E------eC--Cccc---------cC
Confidence                111111222  2332  45554  3455555542  44332         1      11  1211         23


Q ss_pred             HHHHHHHHHc---CCccEEeecCCCC-CCccccccCCCCCCccchhHHHHHHHHHHHh-c-CCHHHHHHHHchhhhhhcC
Q 019093          229 RQAVVSAVTS---GSRKFFLGTDSAP-HERGRKECACGCAGIYNAPVALSLYAKVFEE-M-GALDKLEAFTSFNGPDFYG  302 (346)
Q Consensus       229 ~~aL~~al~~---G~Id~~i~SDHaP-~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~-~-~~l~~lv~~~s~nPAki~g  302 (346)
                      -++|..++.+   ..+ + +.||-.+ ...-++       |  .    +......+.+ . .++++.+++.|.|||+.||
T Consensus       264 l~~l~~~~~~~~~~~~-~-l~TDd~~~~~l~~~-------G--h----i~~~vr~av~~~Gi~~~~Ai~mAT~nPA~~lg  328 (588)
T PRK10027        264 LNALAPLINEFNSPQC-M-LCTDDRNPWEIAHE-------G--H----IDALIRRLIEQHNVPLHVAYRVASWSTARHFG  328 (588)
T ss_pred             HHHHHHHhhccCCCeE-E-EEcCCCChHHHHhc-------c--C----HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcC
Confidence            3445555433   122 4 5677532 111111       2  1    2222222223 3 4899999999999999999


Q ss_pred             CC-CC------CccEEEEe
Q 019093          303 LP-RN------TSKIKLTK  314 (346)
Q Consensus       303 l~-~k------dAdlvi~d  314 (346)
                      |+ .+      .|||+++|
T Consensus       329 l~d~G~IapG~~ADlvvld  347 (588)
T PRK10027        329 LNHLGLLAPGKQADIVLLS  347 (588)
T ss_pred             CCCCcccCCCCcCCEEEEc
Confidence            95 32      79999998

>TIGR00221 nagA N-acetylglucosamine-6-phosphate deacetylase

Probab=99.21  E-value=2.2e-10  Score=111.77  Aligned_cols=71  Identities=15%  Similarity=0.056  Sum_probs=50.3

Q ss_pred             eEEecCccccceecCCC----ccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEE
Q 019093            2 ELTLTQPDDWHLHLRDG----DLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLM   72 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~g----~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~   72 (346)
                      .+|+||+||+|+|...|    ....|++.+.+     +|+|+++.++.|.|+.+..+.++.+.+..++. ..+.++++|.
T Consensus        52 ~~i~PGfID~HvHg~~g~~~~~~~~e~~~~~~~~~~~~GvTt~l~t~~t~~~~~~~~~l~~~~~~~~~~-~~a~~lG~Hl  130 (380)
T TIGR00221        52 NVLTPGFIDIHIHGCGGVDTNDASFETLEIMSERLPKSGCTSFLPTLITQPDENIKQAVKNMREYLAKE-KNAQALGLHL  130 (380)
T ss_pred             CEEccceeeeeeccccCcCCCCCCHHHHHHHHHHHHhcCeeEEeeeccCCCHHHHHHHHHHHHHHHhcc-CCceeeeEee
Confidence            47999999999998652    12346776653     99999999999988777777777665543222 1236888876


Q ss_pred             E
Q 019093           73 T   73 (346)
Q Consensus        73 ~   73 (346)
                      -
T Consensus       131 E  131 (380)
T TIGR00221       131 E  131 (380)
T ss_pred             e
Confidence            5

>TIGR01224 hutI imidazolonepropionase

Probab=99.17  E-value=5e-09  Score=102.01  Aligned_cols=163  Identities=14%  Similarity=0.128  Sum_probs=95.8

Q ss_pred             CCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEE
Q 019093           92 GVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVV  171 (346)
Q Consensus        92 G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lh  171 (346)
                      |.|.++|++-.     .  ..... ..+.++++.+++.|.++.+|+....-   ..     .+....  .+ ... .--|
T Consensus       180 ~~v~~~~~~~~-----~--~~~~~-~~~~~~~~~A~~~g~~v~~H~~e~~~---~~-----~~~~~~--~~-g~~-~~~H  239 (377)
T TIGR01224       180 GLASFADVFCE-----A--GVFSV-EQSRRILQAAQEAGLPVKLHAEELSN---LG-----GAELAA--KL-GAV-SADH  239 (377)
T ss_pred             CCCCeeEEEec-----C--CCcCH-HHHHHHHHHHHHCCCCEEEEecCCCC---CC-----HHHHHH--Hc-CCC-ccHH
Confidence            33677776631     1  11123 67899999999999999999964321   00     111111  11 111 1126


Q ss_pred             EEccCCHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCC
Q 019093          172 MEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAP  251 (346)
Q Consensus       172 i~HvSt~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP  251 (346)
                      ..|+ +.+.++.+++.   .+...+||..-+..         +   ...||+|         +.+..|..-. ++||+.|
T Consensus       240 ~~~~-~~~~l~~la~~---g~~~~~~P~~~~~l---------~---~~~~p~~---------~l~~~Gv~v~-lgTD~~~  293 (377)
T TIGR01224       240 LEHA-SDAGIKALAEA---GTVAVLLPGTTFYL---------R---ETYPPAR---------QLIDYGVPVA-LATDLNP  293 (377)
T ss_pred             HhcC-CHHHHHHHHhc---CCEEEECchHHHhc---------C---CcCccHH---------HHHHCCCCEE-EECCCCC
Confidence            6666 56777777653   56788999743211         1   1224432         2345688777 8999865


Q ss_pred             -CCccccccCCCCCCccchhHHHHHH-HHHHHhcCCHHHHHHHHchhhhhhcCCCC--------CCccEEEEe
Q 019093          252 -HERGRKECACGCAGIYNAPVALSLY-AKVFEEMGALDKLEAFTSFNGPDFYGLPR--------NTSKIKLTK  314 (346)
Q Consensus       252 -~~~~~K~~~~~~~G~~g~e~~lp~l-~~~~~~~~~l~~lv~~~s~nPAki~gl~~--------kdAdlvi~d  314 (346)
                       ...              ...+.-.+ ......+.+++++.++++.|||+++|++.        |.|||+|+|
T Consensus       294 ~~~~--------------~~~~~~~~~~~~~~~~ls~~eal~~~T~~~A~~lg~~~~~G~l~~G~~ADlvv~d  352 (377)
T TIGR01224       294 GSSP--------------TLSMQLIMSLACRLMKMTPEEALHAATVNAAYALGLGEERGTLEAGRDADLVILS  352 (377)
T ss_pred             CCCh--------------hHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCcCCEEEEc
Confidence             210              01111111 11122346899999999999999999843        289999999

This enzyme catalyzes the third step in histidine degradation.

>PRK08203 hydroxydechloroatrazine ethylaminohydrolase; Reviewed

Probab=99.08  E-value=1.1e-08  Score=102.14  Aligned_cols=159  Identities=12%  Similarity=0.023  Sum_probs=90.9

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhh-hHHH---HHHHHHHHHHHhCCCCcEEEEccC--CHHHHHHHHccCCC
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFD-REKV---FIDTILQPLIQRLPQLKVVMEHIT--TMDAVKFVESCKEG  190 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~-~E~~---av~~~l~~~la~~~g~~lhi~HvS--t~~~l~~i~~akg~  190 (346)
                      +.+.++++.+++.|.++.+|+....-  .... .+..   .+.+ +  .-....+.++.+.|..  +.+.++++++.   
T Consensus       214 e~l~~~~~~A~~~g~~v~~H~~e~~~--~~~~~~~~~g~~~~~~-l--~~~g~l~~~~~~~H~~~l~~~~~~~la~~---  285 (451)
T PRK08203        214 ELMRESAALARRLGVRLHTHLAETLD--EEAFCLERFGMRPVDY-L--EDLGWLGPDVWLAHCVHLDDAEIARLART---  285 (451)
T ss_pred             HHHHHHHHHHHHcCCcEEEEeCCCHH--HHHHHHHHhCCCHHHH-H--HHcCCCCCCeEEEEEeCCCHHHHHHHHhc---
Confidence            78999999999999999999843210  0000 0000   0111 1  1122335676666665  46677877754   


Q ss_pred             eeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchh
Q 019093          191 FVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAP  270 (346)
Q Consensus       191 ~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e  270 (346)
                      .+.+-.||..      .+.   .+   .-.+|         +.+.+..|.-=. +|||..+..         ..+-+--|
T Consensus       286 g~~v~~~P~~------~~~---l~---~~~~~---------~~~~~~~Gv~v~-lGtD~~~~~---------~~~~~~~~  334 (451)
T PRK08203        286 GTGVAHCPCS------NMR---LA---SGIAP---------VRELRAAGVPVG-LGVDGSASN---------DGSNLIGE  334 (451)
T ss_pred             CCeEEECcHH------hhh---hc---cCCCC---------HHHHHHCCCeEE-EecCCCccC---------CCcCHHHH
Confidence            3455678842      111   01   11233         334455566556 899963211         00111124


Q ss_pred             HHHHHHHHHHH---hcCCHHHHHHHHchhhhhhcCCCC-------CCccEEEEe
Q 019093          271 VALSLYAKVFE---EMGALDKLEAFTSFNGPDFYGLPR-------NTSKIKLTK  314 (346)
Q Consensus       271 ~~lp~l~~~~~---~~~~l~~lv~~~s~nPAki~gl~~-------kdAdlvi~d  314 (346)
                      ..++++.....   ...++.+++++++.|||+++|++.       |.|||+|+|
T Consensus       335 ~~~~~~~~~~~~~~~~i~~~~~l~~~T~~~A~~lg~~~~G~l~~G~~ADlvv~d  388 (451)
T PRK08203        335 ARQALLLQRLRYGPDAMTAREALEWATLGGARVLGRDDIGSLAPGKLADLALFD  388 (451)
T ss_pred             HHHHHHHhhcccCCCCCCHHHHHHHHHHHHHHHhCCCCCCCcCCCCccCEEEEc
Confidence            45555443222   135789999999999999999852       279999999

>TIGR03121 one_C_dehyd_A formylmethanofuran dehydrogenase subunit A

Probab=99.07  E-value=1.7e-08  Score=101.63  Aligned_cols=32  Identities=16%  Similarity=0.201  Sum_probs=28.1

Q ss_pred             cCCHHHHHHHHchhhhhhcCCCC-C------CccEEEEe
Q 019093          283 MGALDKLEAFTSFNGPDFYGLPR-N------TSKIKLTK  314 (346)
Q Consensus       283 ~~~l~~lv~~~s~nPAki~gl~~-k------dAdlvi~d  314 (346)
                      ..++++++++++.||||+|||+. +      +|||+|+|
T Consensus       429 e~sL~EI~~mtTanPAkaLGL~dkG~L~pGa~ADIaI~D  467 (556)
T TIGR03121       429 EYSLYEIAIMTRAGPAKLLGLTDRGHLGVGADADIAVYD  467 (556)
T ss_pred             CCCHHHHHHHHHHHHHHHhCCCCCCCcCCCCcCCEEEEe
Confidence            34799999999999999999953 2      89999998

Members of this largely archaeal protein family are subunit A of the formylmethanofuran dehydrogenase. Nomenclature in some bacteria may reflect inclusion of the formyltransferase described by TIGR03119 as part of the complex, and therefore call this protein formyltransferase/hydrolase complex Fhc subunit A. Note that this model does not distinguish tungsten (FwdA) from molybdenum-containing (FmdA) forms of this enzyme; a single gene from this family is expressed constitutively in Methanobacterium thermoautotrophicum, which has both tungsten and molybdenum forms and may work interchangeably.

>PRK09356 imidazolonepropionase; Validated

Probab=99.07  E-value=1.3e-08  Score=100.21  Aligned_cols=147  Identities=15%  Similarity=0.081  Sum_probs=85.9

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccCCCeeEEEc
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATV  196 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~akg~~vt~Et  196 (346)
                      +.+.++++.+++.|.++.+|+....-      .+  .+....  . ..... -.|..++ +.+.++++++.   .+.+.+
T Consensus       222 ~~l~~~~~~A~~~g~~v~~H~~~~~~------~~--~~~~~~--~-~~~~~-~~H~~~~-~~~~~~~la~~---g~~~~~  285 (406)
T PRK09356        222 EQSERVLEAAKALGLPVKIHAEQLSN------LG--GAELAA--E-YGALS-ADHLEYL-DEAGIAAMAEA---GTVAVL  285 (406)
T ss_pred             HHHHHHHHHHHHCCCCEEEEEecccC------CC--HHHHHH--H-cCCcE-ehHhhcC-CHHHHHHHHHh---CCEEEE
Confidence            78999999999999999999863211      00  111111  1 11111 1244444 56778887753   456778


Q ss_pred             cchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHH
Q 019093          197 TPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLY  276 (346)
Q Consensus       197 ~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l  276 (346)
                      ||...+.    +     +.  ...+|         +.+.++.|.... ++||+.|...         + ..+    +...
T Consensus       286 ~P~~~~~----l-----~~--~~~~~---------~~~l~~~Gi~v~-lgtD~~~~~~---------~-~~~----~~~~  330 (406)
T PRK09356        286 LPGAFYF----L-----RE--TQYPP---------ARLLRDAGVPVA-LATDFNPGSS---------P-TES----LLLA  330 (406)
T ss_pred             Cccchhh----c-----Cc--ccCch---------HHHHHHCCCeEE-EeCCCCCCCC---------h-hHH----HHHH
Confidence            8854321    0     00  00122         223346688888 9999965210         0 011    2222


Q ss_pred             HHH--HHhcCCHHHHHHHHchhhhhhcCC-CC-------CCccEEEEe
Q 019093          277 AKV--FEEMGALDKLEAFTSFNGPDFYGL-PR-------NTSKIKLTK  314 (346)
Q Consensus       277 ~~~--~~~~~~l~~lv~~~s~nPAki~gl-~~-------kdAdlvi~d  314 (346)
                      ++.  .....+.++++++.+.|||+.+|+ ++       |.|||+|+|
T Consensus       331 ~~~~~~~~~l~~~~~l~~~T~~~A~~~g~~~~~G~i~~G~~AD~vvld  378 (406)
T PRK09356        331 MNMACTLFRLTPEEALAAVTINAARALGRQDTHGSLEVGKKADLVIWD  378 (406)
T ss_pred             HHHHhhhcCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCcCCEEEEC
Confidence            221  123458899999999999999998 33       289999999

>PRK11170 nagA N-acetylglucosamine-6-phosphate deacetylase; Provisional

Probab=99.06  E-value=4.3e-09  Score=102.83  Aligned_cols=71  Identities=11%  Similarity=-0.062  Sum_probs=47.7

Q ss_pred             eEEecCccccceecCCCc--------ccccccccc-----CCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccE
Q 019093            2 ELTLTQPDDWHLHLRDGD--------LLKAVVPHS-----VSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNF   68 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~g~--------~~ke~~~s~-----sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~   68 (346)
                      ++|+||+||+|+|...|.        ...+++++.     .+|+|+++.++.|.|+....+.++.+.+..+..  .+.++
T Consensus        49 ~~l~PG~ID~HvHG~~g~~~~~~~~~~~~~~l~~~~~~~~~~GvTt~lpT~it~~~~~~~~~l~~~~~~~~~~--~a~~~  126 (382)
T PRK11170         49 AILSPGFIDLQLNGCGGVQFNDTAEAISVETLEIMQKANEKSGCTSFLPTLITSSDELMKQAVRVMREYLAKH--PNQAL  126 (382)
T ss_pred             CEEccceeeeeecCccCcccccCccCCCHHHHHHHHHHHHhcCEeEEeeeccCCCHHHHHHHHHHHHHHHhcC--CCeEE
Confidence            479999999999964321        123455443     399999999998887666666666665544322  23688


Q ss_pred             EEEEEE
Q 019093           69 TPLMTL   74 (346)
Q Consensus        69 ~~~~~~   74 (346)
                      ++|+-.
T Consensus       127 G~HlEG  132 (382)
T PRK11170        127 GLHLEG  132 (382)
T ss_pred             EEEeec
Confidence            888653

>PRK14085 imidazolonepropionase; Provisional

Probab=99.02  E-value=3.6e-08  Score=96.45  Aligned_cols=160  Identities=14%  Similarity=0.090  Sum_probs=94.5

Q ss_pred             eeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEE
Q 019093           94 VFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVME  173 (346)
Q Consensus        94 v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~  173 (346)
                      ..-+|+|-..       +..+. +.+.++++.+++.|.++.+|+....-      .  ..+...+  .    .|.. -+.
T Consensus       192 ~~~idi~~~~-------~~~~~-~~l~~~~~~a~~~g~~v~~H~~~~~~------~--~~v~~~~--~----~g~~-~i~  248 (382)
T PRK14085        192 ARWIDVFCER-------GAFDE-DQSRRVLTAGRAAGLGLRVHGNQLGP------G--PGVRLAV--E----LGAA-SVD  248 (382)
T ss_pred             CCeEEEEecC-------CCCCH-HHHHHHHHHHHHcCCCeEEEeCcccC------C--hHHHHHH--H----cCCC-cHH
Confidence            3456877521       11234 78999999999999999999974211      0  1122222  1    1321 244


Q ss_pred             ccC--CHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCC
Q 019093          174 HIT--TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAP  251 (346)
Q Consensus       174 HvS--t~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP  251 (346)
                      |.+  +.+.+++++++   .+....||.+-+.      . +  ..   .||         +.+.++.|..-. +|||+.|
T Consensus       249 H~~~l~~~~~~~la~~---gv~~~~~P~~~~~------~-~--~~---~~~---------~~~l~~aGv~v~-lgsD~~~  303 (382)
T PRK14085        249 HCTYLTDADVDALAGS---GTVATLLPGAEFS------T-R--QP---YPD---------ARRLLDAGVTVA-LASDCNP  303 (382)
T ss_pred             HhCCCCHHHHHHHHHc---CCEEEECcHHHHh------c-C--CC---Cch---------HHHHHHCCCcEE-EEeCCCC
Confidence            444  56777877764   3456678864221      0 0  00   122         444555687777 9999865


Q ss_pred             CCccccccCCCCCCccchhHHHHHHHH--HHHhcCCHHHHHHHHchhhhhhcCCC-C------CCccEEEEec
Q 019093          252 HERGRKECACGCAGIYNAPVALSLYAK--VFEEMGALDKLEAFTSFNGPDFYGLP-R------NTSKIKLTKI  315 (346)
Q Consensus       252 ~~~~~K~~~~~~~G~~g~e~~lp~l~~--~~~~~~~l~~lv~~~s~nPAki~gl~-~------kdAdlvi~d~  315 (346)
                      +..-            +  ..++....  ......+.++++++.+.|||+++|++ .      +.|||+|+|.
T Consensus       304 ~~~~------------~--~~~~~~~~~~~~~~~l~~~~al~~aT~~~A~~lg~~~~G~l~~G~~ADlvv~d~  362 (382)
T PRK14085        304 GSSY------------T--SSMPFCVALAVRQMGMTPAEAVWAATAGGARALRRDDVGVLAVGARADLHVLDA  362 (382)
T ss_pred             CCCh------------H--HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCCCCCcCCCCCCCEEEEcC
Confidence            4311            0  11222211  11224589999999999999999984 2      2899999993

>COG3964 Predicted amidohydrolase [General function prediction only]

Probab=99.00  E-value=4.8e-08  Score=89.86  Aligned_cols=252  Identities=15%  Similarity=0.111  Sum_probs=132.6

Q ss_pred             EEecCccccceecCC-Cccc--cccccccCCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCC---C-ccEEEEEEEE
Q 019093            3 LTLTQPDDWHLHLRD-GDLL--KAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPA---S-SNFTPLMTLY   75 (346)
Q Consensus         3 ~vlPG~ID~HvH~r~-g~~~--ke~~~s~sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~---~-vd~~~~~~~~   75 (346)
                      +|-||+||.|||+-- |.+.  ..|-....-|+||+||--.+.  ..|...|...   .-+.+..   + .++++-+-..
T Consensus        54 ~VspG~iDlHvHvy~ggt~~~v~pd~~ga~~GvTTvVDAGSaG--aanf~gF~r~---vie~Sr~RI~Aflnvs~~Gl~a  128 (386)
T COG3964          54 IVSPGLIDLHVHVYYGGTEGGVRPDMYGAPNGVTTVVDAGSAG--AANFDGFYRT---VIEASRVRIKAFLNVSPPGLTA  128 (386)
T ss_pred             EeccCeeeeeeEEecCCCccCcCHHHccccCCceEEEecCCcC--ccchhhHHHH---hhcchhheeeeeeeccCcceee
Confidence            689999999999865 3332  234344457999999975433  3344433333   2222220   1 2333321111


Q ss_pred             eCCC-----CCHHHHHHHHHc--CCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhh
Q 019093           76 LTDT-----TSPDEIKLARKT--GVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFD  148 (346)
Q Consensus        76 ~~~~-----~~~~el~~l~~~--G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~  148 (346)
                      .+..     ...+++.++.+.  -.++|+|+-+.... .+..++.    -+...++.++..++|+|+|-.++--    ..
T Consensus       129 ~nE~~d~~nid~d~i~aa~reh~d~ivGlKvR~s~~~-~g~~Git----Pl~la~~ia~~~klPlmvHigePp~----~~  199 (386)
T COG3964         129 SNELYDPDNIDEDKIHAAFREHRDVIVGLKVRVSTED-IGEYGIT----PLTLALRIANDLKLPLMVHIGEPPV----LM  199 (386)
T ss_pred             ehhhCChhhCCHHHHHHHHHhCcCcEEEEEEEeeecc-ccccCCc----hHHHHHHHHhhcCCceEEecCCCCc----cH
Confidence            1111     123355555542  34889999874321 1223443    3667888888999999999998642    11


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEccC----------CHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceE
Q 019093          149 REKVFIDTILQPLIQRLPQLKVVMEHIT----------TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNY  218 (346)
Q Consensus       149 ~E~~av~~~l~~~la~~~g~~lhi~HvS----------t~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k  218 (346)
                      .|      ++  ...+.-+   .|.|+=          ..+-...++++++--|-.++.-             | +..+-
T Consensus       200 dE------vl--erL~~GD---IitHcfngkpn~~l~~dg~vr~~vrra~erGV~fD~gh-------------G-~asfs  254 (386)
T COG3964         200 DE------VL--ERLRRGD---IITHCFNGKPNTILTDDGVVRAEVRRARERGVIFDAGH-------------G-RASFS  254 (386)
T ss_pred             HH------HH--HhccCCc---eeeeeccCCCCCccccchhHHHHHHHHHhcceEEEccC-------------C-cceee
Confidence            22      12  1111112   244432          1223344555542112222211             1 12332


Q ss_pred             EeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHH-HHHHhcCCHHHHHHHHchhh
Q 019093          219 CLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYA-KVFEEMGALDKLEAFTSFNG  297 (346)
Q Consensus       219 ~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~-~~~~~~~~l~~lv~~~s~nP  297 (346)
                      ++      --|.++-++|.   -|+ |+||--.+++-.           |=-+.|+..+ +++.-..+|+++++....||
T Consensus       255 f~------vAr~aia~Gll---P~~-ISSDlh~~~~~n-----------~Pv~dla~~mSKllalgmpl~~Vi~avT~np  313 (386)
T COG3964         255 FN------VARRAIANGLL---PDI-ISSDLHTITKLN-----------GPVYDLAWIMSKLLALGMPLTDVINAVTHNP  313 (386)
T ss_pred             HH------HHHHHHhcCCC---cce-eeccceeeeecC-----------chHHHHHHHHHHHHHcCCcHHHHHHHHhcCH
Confidence            22      23444444432   256 899976664211           1112233322 33332348999999999999


Q ss_pred             hhhcCCCCC-------CccEEEEe
Q 019093          298 PDFYGLPRN-------TSKIKLTK  314 (346)
Q Consensus       298 Aki~gl~~k-------dAdlvi~d  314 (346)
                      |..+||+.+       .||++||+
T Consensus       314 A~~i~l~~~gtLa~G~~aD~tvf~  337 (386)
T COG3964         314 AVLIGLAEIGTLAPGAFADITVFK  337 (386)
T ss_pred             HHHhCccccCccCCCcccceEEEE
Confidence            999999643       79999998

>PRK08393 N-ethylammeline chlorohydrolase; Provisional

Probab=99.00  E-value=5.2e-08  Score=96.64  Aligned_cols=175  Identities=17%  Similarity=0.116  Sum_probs=101.4

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHH-----HHHH-HHHhCCCCcEEEEccC--CHHHHHHHHccC
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDT-----ILQP-LIQRLPQLKVVMEHIT--TMDAVKFVESCK  188 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~-----~l~~-~la~~~g~~lhi~HvS--t~~~l~~i~~ak  188 (346)
                      +.+.++++.+++.|.++.+|+....       .|.+.+..     -++. .-....+.++.+.|..  +.+.+++++++ 
T Consensus       189 ~~l~~~~~~A~~~g~~v~~H~~e~~-------~~~~~~~~~~g~~~~~~l~~~G~l~~~~~~~H~~~l~~~~l~~la~~-  260 (424)
T PRK08393        189 ALLKWVREKAREWNKLITIHLSETM-------DEIKQIREKYGKSPVVLLDEIGFLNEDVIAAHGVWLSSRDIRILASA-  260 (424)
T ss_pred             HHHHHHHHHHHHcCCcEEEEeCCCH-------HHHHHHHHHhCcCHHHHHHHcCCCCCCcEEEEeecCCHHHHHHHHhc-
Confidence            7889999999999999999986432       11111110     0100 1123345666566655  67888888864 


Q ss_pred             CCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccc
Q 019093          189 EGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYN  268 (346)
Q Consensus       189 g~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g  268 (346)
                        .+++..||..      +..- +.+     .+|++         +.+..|. .+.+|||- +.+.         ....-
T Consensus       261 --g~~v~~~P~s------n~~l-g~g-----~~~~~---------~~~~~Gv-~v~lGtD~-~~~~---------~~~d~  306 (424)
T PRK08393        261 --GVTVAHNPAS------NMKL-GSG-----VMPLR---------KLLNAGV-NVALGTDG-AASN---------NNLDM  306 (424)
T ss_pred             --CCEEEECHHH------HHhh-ccC-----CCCHH---------HHHHCCC-cEEEecCC-CccC---------CchhH
Confidence              4677889942      1110 111     23332         2334454 44489995 2210         00011


Q ss_pred             h-hHHHHHHHHHHHhc----CCHHHHHHHHchhhhhhcCCCC------CCccEEEEe--cceeecCCccccCCccccc
Q 019093          269 A-PVALSLYAKVFEEM----GALDKLEAFTSFNGPDFYGLPR------NTSKIKLTK--IPWKVPEAFSFSFGDIIPM  333 (346)
Q Consensus       269 ~-e~~lp~l~~~~~~~----~~l~~lv~~~s~nPAki~gl~~------kdAdlvi~d--~~~~v~~~~~~s~~~~sp~  333 (346)
                      + |..+..+.......    .++++++++.+.|||+.+|++.      +.|||+++|  ..+.++..+..+...|+++
T Consensus       307 ~~~~~~a~~~~~~~~~~~~~~~~~~al~~aT~~~A~~lg~~~G~l~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~  384 (424)
T PRK08393        307 LREMKLAALLHKVHNLDPTIADAETVFRMATQNGAKALGLKAGVIKEGYLADIAVIDFNRPHLRPINNPISHLVYSAN  384 (424)
T ss_pred             HHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHhCCCCCccCCCCccCEEEEeCCCCCcCCCCChHHHeeeeCC
Confidence            1 23333332211111    2578999999999999999743      289999999  5566666667777777766

>PRK06687 chlorohydrolase; Validated

Probab=98.99  E-value=3e-08  Score=98.11  Aligned_cols=171  Identities=16%  Similarity=0.127  Sum_probs=94.6

Q ss_pred             EEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHH-----HHHHHHHH--hCCCC
Q 019093           96 AVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFID-----TILQPLIQ--RLPQL  168 (346)
Q Consensus        96 ~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~-----~~l~~~la--~~~g~  168 (346)
                      .+|+.++...   ...+++  +.+.++++.+++.|.++.+|+.....       |...+.     +.++ .+.  ...+-
T Consensus       180 ~i~~~~~~~~---~~~~s~--e~l~~~~~~A~~~g~~i~~H~~e~~~-------e~~~~~~~~g~~~~~-~l~~~g~l~~  246 (419)
T PRK06687        180 NFKVMVAPHS---PYSCSR--DLLEASLEMAKELNIPLHVHVAETKE-------ESGIILKRYGKRPLA-FLEELGYLDH  246 (419)
T ss_pred             ceEEEEeCCC---CCCCCH--HHHHHHHHHHHHcCCcEEEEeCCCHH-------HHHHHHHHHCcCHHH-HHHHcCCCCC
Confidence            4777765432   122333  78999999999999999999875421       111010     0110 121  22345


Q ss_pred             cEEEEccC--CHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEee
Q 019093          169 KVVMEHIT--TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLG  246 (346)
Q Consensus       169 ~lhi~HvS--t~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~  246 (346)
                      ++.+.|..  +.+.++++++. |  +.+-.||..      +... +     .-.||++         +.+..|.-=. +|
T Consensus       247 ~~~~~H~~~~~~~~~~~la~~-g--~~v~~~P~s------n~~l-~-----~g~~p~~---------~~~~~Gv~v~-lG  301 (419)
T PRK06687        247 PSVFAHGVELNEREIERLASS-Q--VAIAHNPIS------NLKL-A-----SGIAPII---------QLQKAGVAVG-IA  301 (419)
T ss_pred             CeEEEEEecCCHHHHHHHHHc-C--CeEEECcHH------hhhh-c-----cCCCcHH---------HHHHCCCeEE-Ee
Confidence            55666655  57778888764 3  444568842      1111 1     1124443         2344465455 89


Q ss_pred             cCCCCCCccccccCCCCCCccchhH-HHHHHHHHHHh----cCCHHHHHHHHchhhhhhcCCCC--C------CccEEEE
Q 019093          247 TDSAPHERGRKECACGCAGIYNAPV-ALSLYAKVFEE----MGALDKLEAFTSFNGPDFYGLPR--N------TSKIKLT  313 (346)
Q Consensus       247 SDHaP~~~~~K~~~~~~~G~~g~e~-~lp~l~~~~~~----~~~l~~lv~~~s~nPAki~gl~~--k------dAdlvi~  313 (346)
                      ||-.+-.          .....++. .+..++.....    ..+.+++.++.+.|||+.+|++.  +      .|||+++
T Consensus       302 tD~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gA~~lg~~~~~G~l~~G~~ADlv~~  371 (419)
T PRK06687        302 TDSVASN----------NNLDMFEEGRTAALLQKMKSGDASQFPIETALKVLTIEGAKALGMENQIGSLEVGKQADFLVI  371 (419)
T ss_pred             CCCCCCC----------CChhHHHHHHHHHHHhccccCCCccCCHHHHHHHHhHHHHHHcCCCCCCcccCCCccCCEEEE
Confidence            9963210          01122222 22222221111    24688999999999999999842  2      7999999


Q ss_pred             e
Q 019093          314 K  314 (346)
Q Consensus       314 d  314 (346)
                      |
T Consensus       372 d  372 (419)
T PRK06687        372 Q  372 (419)
T ss_pred             C
Confidence            9

>PRK07572 cytosine deaminase; Validated

Probab=98.98  E-value=6e-08  Score=96.25  Aligned_cols=166  Identities=17%  Similarity=0.156  Sum_probs=88.2

Q ss_pred             HHHHHHHHHhHHcCCcEEEec-CCCCCCCChhhhHHHHHHHHHHHHHHhCCC--CcEEEEccCC---------HHHHHHH
Q 019093          117 GKCVHVLEEMVEQNMPLLVHG-EVTDPIVDIFDREKVFIDTILQPLIQRLPQ--LKVVMEHITT---------MDAVKFV  184 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHa-E~~~~~~~~~~~E~~av~~~l~~~la~~~g--~~lhi~HvSt---------~~~l~~i  184 (346)
                      +.+..+++.++++|+++.+|+ |..+.   .    ...+.+..  ......|  .++.+.|...         .+.++++
T Consensus       191 e~l~~~~~~A~~~g~~v~~H~~e~~~~---~----~~~~~~~~--~~~~~~G~~~~v~~~H~~~l~~~~~~~~~~~~~~l  261 (426)
T PRK07572        191 ESVRLLCEIAAERGLRVDMHCDESDDP---L----SRHIETLA--AETQRLGLQGRVAGSHLTSMHSMDNYYVSKLIPLM  261 (426)
T ss_pred             HHHHHHHHHHHHcCCCeEEEECCCCCh---h----HHHHHHHH--HHHHHhCCCCCEEEEccchhhcCCHHHHHHHHHHH
Confidence            678999999999999999999 54321   0    11122222  1111222  2788888854         3457777


Q ss_pred             HccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCC
Q 019093          185 ESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCA  264 (346)
Q Consensus       185 ~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~  264 (346)
                      +++   .++.=.||..-+.     .. +   .....|+-+..   ..+.+.++.|.-=. +|||...-       +|...
T Consensus       262 a~~---g~~vv~~P~~n~~-----l~-~---~~~~~~~~~g~---~~v~~l~~~GV~v~-lGtD~~~~-------~~~~~  318 (426)
T PRK07572        262 AEA---GVNAIANPLINIT-----LQ-G---RHDTYPKRRGM---TRVPELMAAGINVA-FGHDCVMD-------PWYSL  318 (426)
T ss_pred             HHc---CCeEEECchhhhh-----hc-C---CCCCCCCCCCC---cCHHHHHHCCCcEE-EecCCCCC-------CCCCC
Confidence            765   3555677732111     00 0   00111211221   12445555675555 89998421       11112


Q ss_pred             Cc-cchhHHHHHHHHH-HHhcCCHHHHHHHHchhhhhhcCCCC------CCccEEEEe
Q 019093          265 GI-YNAPVALSLYAKV-FEEMGALDKLEAFTSFNGPDFYGLPR------NTSKIKLTK  314 (346)
Q Consensus       265 G~-~g~e~~lp~l~~~-~~~~~~l~~lv~~~s~nPAki~gl~~------kdAdlvi~d  314 (346)
                      |. .-+|...-.+... +.....+.++.++.+.||||++|++.      |.|||+++|
T Consensus       319 ~~~~~~e~~~~~~~~~~~~~~~~l~~~l~~aT~~~A~~lgl~~~gi~~G~~ADlvl~d  376 (426)
T PRK07572        319 GSGDMLEVAHMGLHVAQMTGQDAMRACFDAVTVNPARIMGLEGYGLEPGCNADLVLLQ  376 (426)
T ss_pred             CCCCHHHHHHHHHHHHcCCCHHHHHHHHHHhhcchHHhhCCCCcCCCCCCcCCEEEEe
Confidence            22 2223322111110 00011356788899999999999832      389999998

>PRK09045 N-ethylammeline chlorohydrolase; Provisional

Probab=98.98  E-value=1.4e-07  Score=94.05  Aligned_cols=162  Identities=12%  Similarity=0.104  Sum_probs=91.8

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHH----HHHHHHH--hCCCCcEEEEccC--CHHHHHHHHccC
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDT----ILQPLIQ--RLPQLKVVMEHIT--TMDAVKFVESCK  188 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~----~l~~~la--~~~g~~lhi~HvS--t~~~l~~i~~ak  188 (346)
                      +.+.++++.+++.|.++.+|+....     ...+ .++.+    .++ .+.  ...+.+..+.|..  +.+.++.+++. 
T Consensus       202 ~~l~~~~~~A~~~g~~v~~H~~e~~-----~~~~-~~~~~~g~~~~~-~l~~~g~l~~r~~~~H~~~l~~~~~~~la~~-  273 (443)
T PRK09045        202 ENLERIRTLAEQLDLPIHIHLHETA-----QEIA-DSLKQHGQRPLA-RLARLGLLGPRLIAVHMTQLTDAEIALLAET-  273 (443)
T ss_pred             HHHHHHHHHHHHcCCCEEEeecCcH-----HHHH-HHHHHhCCCHHH-HHHHcCCCCCCeEEEEecCCCHHHHHHHHHc-
Confidence            7899999999999999999985321     0000 01111    010 111  2234455566665  46778887753 


Q ss_pred             CCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccc
Q 019093          189 EGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYN  268 (346)
Q Consensus       189 g~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g  268 (346)
                        .++.-.||..      .+.. +  .   -.+|+|         +.+..|..-. +|||+.+......         +-
T Consensus       274 --g~~i~~~P~~------~~~~-~--~---~~~~~~---------~l~~~Gv~v~-lGtD~~~~~~~~~---------~~  320 (443)
T PRK09045        274 --GCSVVHCPES------NLKL-A--S---GFCPVA---------KLLQAGVNVA-LGTDGAASNNDLD---------LF  320 (443)
T ss_pred             --CCeEEECHHH------Hhhh-c--c---CCCcHH---------HHHHCCCeEE-EecCCCCCCCCcc---------HH
Confidence              3556678832      1110 1  0   012222         2344577777 9999864211000         11


Q ss_pred             hhHHHHHHHHHHH----hcCCHHHHHHHHchhhhhhcCCC-CC-------CccEEEEe-cceee
Q 019093          269 APVALSLYAKVFE----EMGALDKLEAFTSFNGPDFYGLP-RN-------TSKIKLTK-IPWKV  319 (346)
Q Consensus       269 ~e~~lp~l~~~~~----~~~~l~~lv~~~s~nPAki~gl~-~k-------dAdlvi~d-~~~~v  319 (346)
                      -|..+..++....    ...++++++++++.|||+.+|++ ++       .|||+|+| ..+..
T Consensus       321 ~~~~~a~~~~~~~~~~~~~~~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~  384 (443)
T PRK09045        321 GEMRTAALLAKAVAGDATALPAHTALRMATLNGARALGLDDEIGSLEPGKQADLVAVDLSGLET  384 (443)
T ss_pred             HHHHHHHHHHhhccCCCCcCCHHHHHHHHhHHHHHHcCCCCCCcccCCCCcCCEEEEeCCCCCc
Confidence            1444444332211    12478999999999999999984 21       79999999 54433

>TIGR02967 guan_deamin guanine deaminase

Probab=98.97  E-value=7.9e-08  Score=94.49  Aligned_cols=155  Identities=16%  Similarity=0.096  Sum_probs=88.5

Q ss_pred             HHHHHHHHHhHHc-CCcEEEecCCCCCCCChhhhHHHHHHHH-------HHH-HHHhCCCCcEEEEccC--CHHHHHHHH
Q 019093          117 GKCVHVLEEMVEQ-NMPLLVHGEVTDPIVDIFDREKVFIDTI-------LQP-LIQRLPQLKVVMEHIT--TMDAVKFVE  185 (346)
Q Consensus       117 ~~l~~~l~~~~~~-g~~v~vHaE~~~~~~~~~~~E~~av~~~-------l~~-~la~~~g~~lhi~HvS--t~~~l~~i~  185 (346)
                      +.|.++++.+++. |.++.+|+.....       |...+.+.       ++. .-....|.++.+.|..  +.+.+++++
T Consensus       186 e~l~~~~~~A~~~~g~~v~~H~~e~~~-------~~~~~~~~~~~~~~~~~~l~~~g~lg~~~~~~H~~~~~~~~~~~l~  258 (401)
T TIGR02967       186 EQLAAAGELAKEYPDVYVQTHLSENKD-------EIAWVKELFPEAKDYLDVYDHYGLLGRRSVFAHCIHLSDEECQRLA  258 (401)
T ss_pred             HHHHHHHHHHHhCCCCeeEEEECCCch-------HHHHHHHHcCCCCcHHHHHHHCCCCCCCeEEEecccCCHHHHHHHH
Confidence            7899999999998 9999999853321       11111110       100 1122346677777777  566778777


Q ss_pred             ccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCC
Q 019093          186 SCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAG  265 (346)
Q Consensus       186 ~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G  265 (346)
                      +.   .+.+-.||..-      +.- +  .   -.||++         +.+..|.--. +|||.....           .
T Consensus       259 ~~---g~~v~~~P~~~------~~~-~--~---g~~~~~---------~~~~~Gv~v~-lGtD~~~~~-----------~  302 (401)
T TIGR02967       259 ET---GAAIAHCPTSN------LFL-G--S---GLFNLK---------KALEHGVRVG-LGTDVGGGT-----------S  302 (401)
T ss_pred             Hc---CCeEEEChHHH------HHh-c--c---CCCCHH---------HHHHCCCeEE-EecCCCCCC-----------C
Confidence            63   45567888421      110 1  1   134432         2344575444 899963210           0


Q ss_pred             ccchhH-HHHHHHHHHHh-cCCHHHHHHHHchhhhhhcCCCC--------CCccEEEEe
Q 019093          266 IYNAPV-ALSLYAKVFEE-MGALDKLEAFTSFNGPDFYGLPR--------NTSKIKLTK  314 (346)
Q Consensus       266 ~~g~e~-~lp~l~~~~~~-~~~l~~lv~~~s~nPAki~gl~~--------kdAdlvi~d  314 (346)
                      ..-++. .+-+.+....+ ..+..++.++.+.|||+.+|++.        |.|||+|+|
T Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~~A~~lg~~~~~G~i~~G~~ADlvi~d  361 (401)
T TIGR02967       303 FSMLQTLREAYKVSQLQGARLSPFEAFYLATLGGARALDLDDRIGNFEPGKEADFVVLD  361 (401)
T ss_pred             cCHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHhCCcCCccccCCCCccCEEEEc
Confidence            011121 11111111112 24788999999999999999852        279999998

This model describes guanine deaminase, which hydrolyzes guanine to xanthine and ammonia. Xanthine can then be converted to urate by xanthine dehydrogenase, and urate subsequently degraded. In some bacteria, the guanine deaminase gene is found near the xdhABC genes for xanthine dehydrogenase. Non-homologous forms of guanine deaminase also exist, as well as distantly related forms outside the scope of this model.

>PRK05985 cytosine deaminase; Provisional

Probab=98.96  E-value=5.2e-08  Score=95.56  Aligned_cols=154  Identities=14%  Similarity=0.115  Sum_probs=82.0

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCC--cEEEEccCCH---------HHHHHHH
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQL--KVVMEHITTM---------DAVKFVE  185 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~--~lhi~HvSt~---------~~l~~i~  185 (346)
                      +.|.++++.+++.|.++.+|+....-      .....+.+.+  ..+...|.  ++.+.|..+-         +.+++++
T Consensus       191 ~~l~~~~~~A~~~g~~i~~Hv~e~~d------~~~~~~~~~~--e~~~~~g~~~~~~i~H~~~l~~~~~~~~~~~i~~la  262 (391)
T PRK05985        191 GQLDIVFGLAERHGVGIDIHLHEPGE------LGAFQLERIA--ARTRALGMQGRVAVSHAFCLGDLPEREVDRLAERLA  262 (391)
T ss_pred             HHHHHHHHHHHHhCCCcEEeeCCCCC------ccHHHHHHHH--HHHHHhCCCCCEehhhhhhhhcCCHHHHHHHHHHHH
Confidence            67899999999999999999753211      0011122333  22223343  5899998642         3456665


Q ss_pred             ccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCC
Q 019093          186 SCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAG  265 (346)
Q Consensus       186 ~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G  265 (346)
                      ++ |..|.  +|+.           .+  ..   -+|         +-+.++.|.-=. +|||...-       +|.+.|
T Consensus       263 e~-g~~v~--~~~~-----------~~--~~---~~~---------~~~l~~~Gv~v~-lGtD~~~~-------~~~p~~  306 (391)
T PRK05985        263 EA-GVAIM--TNAP-----------GS--VP---VPP---------VAALRAAGVTVF-GGNDGIRD-------TWWPYG  306 (391)
T ss_pred             Hc-CCeEE--EeCC-----------CC--CC---CCC---------HHHHHHCCCeEE-EecCCCCC-------CCcCCC
Confidence            54 34442  2220           00  00   122         223444566555 89997421       111212


Q ss_pred             c-cchhHHHHHHH-HHHHhcCCHHHHHHHHchhhhhhcCCCC------CCccEEEEe
Q 019093          266 I-YNAPVALSLYA-KVFEEMGALDKLEAFTSFNGPDFYGLPR------NTSKIKLTK  314 (346)
Q Consensus       266 ~-~g~e~~lp~l~-~~~~~~~~l~~lv~~~s~nPAki~gl~~------kdAdlvi~d  314 (346)
                      - .-++...-+.. ..+.....++++.++.+.|||+.+|++.      |.|||+++|
T Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~T~~~A~~lg~~~~~l~~G~~ADlvvld  363 (391)
T PRK05985        307 NGDMLERAMLIGYRSGFRTDDELAAALDCVTHGGARALGLEDYGLAVGARADFVLVD  363 (391)
T ss_pred             CCcHHHHHHHHHHHHccCChHHHHHHHHHHcchhHHHhCCcccCCCCCCcCCEEEEC
Confidence            1 11222111111 1111111367899999999999998742      379999998

>PRK09230 cytosine deaminase; Provisional

Probab=98.96  E-value=1.2e-07  Score=94.17  Aligned_cols=168  Identities=13%  Similarity=0.068  Sum_probs=90.3

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCH---------HHHHHHHcc
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTM---------DAVKFVESC  187 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~---------~~l~~i~~a  187 (346)
                      +.+.++++.+++.|+++.+|+....-... ...+  ...+.+   ...-.+.++.+.|....         +.++++++ 
T Consensus       195 e~l~~~~~~A~~~g~~~~~H~~E~~~~~~-~~~~--~~~~~~---~~~gl~~~v~~~H~~~l~~~~~~~~~~~~~~La~-  267 (426)
T PRK09230        195 ESLHKAFALAQKYDRLIDVHCDEIDDEQS-RFVE--TVAALA---HREGMGARVTASHTTAMHSYNGAYTSRLFRLLKM-  267 (426)
T ss_pred             HHHHHHHHHHHHhCCCcEEEECCCCCcch-HHHH--HHHHHH---HHhCCCCCEEEEecCchhcCCHHHHHHHHHHHHH-
Confidence            67899999999999999999864321000 0011  111222   11224668888887754         35666655 


Q ss_pred             CCCeeEEEccchh-hccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCc
Q 019093          188 KEGFVAATVTPQH-LVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGI  266 (346)
Q Consensus       188 kg~~vt~Et~ph~-L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~  266 (346)
                        ..+.+..||.. +.|..          ...--|.-|.-..   +.+.++.|. .+-||||...       ..|...|.
T Consensus       268 --~gv~vv~cP~sn~~l~~----------~~~~~p~~~g~~p---i~~l~~aGv-~V~lGTD~~~-------d~~~~~~~  324 (426)
T PRK09230        268 --SGINFVANPLVNIHLQG----------RFDTYPKRRGITR---VKEMLEAGI-NVCFGHDDVF-------DPWYPLGT  324 (426)
T ss_pred             --cCCeEEECcchhhhhcC----------CCCCCCCCCCCcC---HHHHHHCCC-eEEEecCCCC-------CCCcCCCC
Confidence              35778899953 22210          0101111111111   223444564 4448999631       12222243


Q ss_pred             cchhHHHHHHHHHHHhc-C-CHHHHHHHHchhhhhhcCCCC------CCccEEEEe
Q 019093          267 YNAPVALSLYAKVFEEM-G-ALDKLEAFTSFNGPDFYGLPR------NTSKIKLTK  314 (346)
Q Consensus       267 ~g~e~~lp~l~~~~~~~-~-~l~~lv~~~s~nPAki~gl~~------kdAdlvi~d  314 (346)
                      ..+-..+.+.+...... . .++++.++.+.||||.+|++.      |.|||++||
T Consensus       325 ~d~~~~~~~~~~~~~~~~~~~~~~~l~maT~~gA~alg~~~~gle~G~~ADlv~~~  380 (426)
T PRK09230        325 ANMLQVLHMGLHVCQLMGYGQINDGLNLITTHSARTLNLQDYGIEVGNPANLIILP  380 (426)
T ss_pred             CCHHHHHHHHHHHHhhCChhhHHHHHHHHhcchhHHhCCCCcCCCCCCcCCEEEEe
Confidence            33311122211111111 1 367899999999999999832      389999998

>cd01309 Met_dep_hydrolase_C Metallo-dependent hydrolases, subgroup C is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site

Probab=98.95  E-value=8.6e-08  Score=93.04  Aligned_cols=165  Identities=13%  Similarity=0.107  Sum_probs=91.7

Q ss_pred             HHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCC-HHHHHHHHccCCCeeEEEc
Q 019093          118 KCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITT-MDAVKFVESCKEGFVAATV  196 (346)
Q Consensus       118 ~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt-~~~l~~i~~akg~~vt~Et  196 (346)
                      .+..++..++ -..++.+||...           ..+.+++  .+++..|.++.|.|... .+.++.+++   ..+.+-+
T Consensus       181 ~l~~l~~~~~-~~~~v~vHa~~~-----------~~i~~~l--~~~~e~g~~~~i~H~~~~~~~~~~la~---~gv~v~~  243 (359)
T cd01309         181 KLEALLPVLK-GEIPVRIHAHRA-----------DDILTAI--RIAKEFGIKITIEHGAEGYKLADELAK---HGIPVIY  243 (359)
T ss_pred             cHHHHHHHHc-CCeeEEEEeCCH-----------HHHHHHH--HHHHHcCCCEEEECchhHHHHHHHHHH---cCCCEEE
Confidence            3444444443 227899998753           2355666  57777799999999874 333444443   3455566


Q ss_pred             cchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcC-CccEEeecCCCCCCccccccCCCCCCccchhHHHHH
Q 019093          197 TPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSG-SRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSL  275 (346)
Q Consensus       197 ~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G-~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~  275 (346)
                      +|..-......              +.+.  ....+-+.+..| ..-. ++||| |...              .. .++.
T Consensus       244 ~P~~~~~~~~~--------------~~~~--~~~~~~~l~~aGGv~va-lgsD~-~~~~--------------~~-~l~~  290 (359)
T cd01309         244 GPTLTLPKKVE--------------EVND--AIDTNAYLLKKGGVAFA-ISSDH-PVLN--------------IR-NLNL  290 (359)
T ss_pred             CccccccccHH--------------Hhhc--chhhHHHHHHcCCceEE-EECCC-CCcc--------------ch-hHHH
Confidence            77532111100              0000  001122334456 6666 89999 3321              00 1222


Q ss_pred             HHHHHHh-cCCHHHHHHHHchhhhhhcCCCC--------CCccEEEEe-cceeecCCccccCCcccccCCCcE
Q 019093          276 YAKVFEE-MGALDKLEAFTSFNGPDFYGLPR--------NTSKIKLTK-IPWKVPEAFSFSFGDIIPMFAGNT  338 (346)
Q Consensus       276 l~~~~~~-~~~l~~lv~~~s~nPAki~gl~~--------kdAdlvi~d-~~~~v~~~~~~s~~~~sp~~~G~~  338 (346)
                      ....... ..+.++++++++.|||+++|+..        ++|||+||| .+...     .++...+.. +|+.
T Consensus       291 ~~~~a~~~gl~~~~al~~~T~n~A~~lg~~~~~G~l~~G~~ADlvv~d~dpl~~-----~~~v~~v~i-~G~~  357 (359)
T cd01309         291 EAAKAVKYGLSYEEALKAITINPAKILGIEDRVGSLEPGKDADLVVWNGDPLEP-----TSKPEQVYI-DGRL  357 (359)
T ss_pred             HHHHHHHcCCCHHHHHHHHHHHHHHHhCCCCCcccCCCCCccCEEEECCCcccc-----cCcccEEEE-CCEE
Confidence            1222223 35889999999999999999942        279999999 54433     234555555 4543

The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.

>PRK06151 N-ethylammeline chlorohydrolase; Provisional

Probab=98.92  E-value=1.3e-07  Score=95.53  Aligned_cols=157  Identities=15%  Similarity=0.126  Sum_probs=88.8

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHH-----HHHHHHHh--CCCCcEEEEccC--CH---------
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDT-----ILQPLIQR--LPQLKVVMEHIT--TM---------  178 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~-----~l~~~la~--~~g~~lhi~HvS--t~---------  178 (346)
                      +.|.++++.+++.|.++.+|+-...       .|...+.+     .++ .+.+  ..+.++.+.|..  +.         
T Consensus       221 e~l~~~~~~A~~~g~~v~~H~~e~~-------~~~~~~~~~~g~~~~~-~~~~~g~l~~r~~l~H~~~l~~~~~~~~~~~  292 (488)
T PRK06151        221 DLLRRTAAAARELGCPVRLHCAQGV-------LEVETVRRLHGTTPLE-WLADVGLLGPRLLIPHATYISGSPRLNYSGG  292 (488)
T ss_pred             HHHHHHHHHHHHCCCcEEEEECCch-------HHHHHHHHHcCCCHHH-HHHHcCCCCCCcEEEEEEEcCCccccccCCH
Confidence            7899999999999999999994321       11111111     111 1221  234455555555  34         


Q ss_pred             HHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccc
Q 019093          179 DAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKE  258 (346)
Q Consensus       179 ~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~  258 (346)
                      +.++++++.   .+++-.||...    ..     ++.   -.+|+         -+.++.|.-=. +|||..|...    
T Consensus       293 ~~~~~la~~---g~~v~~~P~~~----~~-----~g~---~~~p~---------~~l~~~Gv~v~-lGtD~~~~~~----  343 (488)
T PRK06151        293 DDLALLAEH---GVSIVHCPLVS----AR-----HGS---ALNSF---------DRYREAGINLA-LGTDTFPPDM----  343 (488)
T ss_pred             HHHHHHHhc---CCEEEECchhh----hh-----hcc---ccccH---------HHHHHCCCcEE-EECCCCCccH----
Confidence            778888764   35556788411    11     111   12333         23445565555 8999633110    


Q ss_pred             cCCCCCCccchhHHHHHHHHHHHh----cCCHHHHHHHHchhhhhhcCCCC-C------CccEEEEe-cceee
Q 019093          259 CACGCAGIYNAPVALSLYAKVFEE----MGALDKLEAFTSFNGPDFYGLPR-N------TSKIKLTK-IPWKV  319 (346)
Q Consensus       259 ~~~~~~G~~g~e~~lp~l~~~~~~----~~~l~~lv~~~s~nPAki~gl~~-k------dAdlvi~d-~~~~v  319 (346)
                             +.  +..+.+.......    ..++++++++++.|||+++|++. +      .|||+|+| ....+
T Consensus       344 -------~~--~~~~~~~~~~~~~~~~~~~~~~~al~~aT~~~A~~lg~~~~G~I~~G~~ADlvvld~~~~~~  407 (488)
T PRK06151        344 -------VM--NMRVGLILGRVVEGDLDAASAADLFDAATLGGARALGRDDLGRLAPGAKADIVVFDLDGLHM  407 (488)
T ss_pred             -------HH--HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhCCCCCcccCCCCcCCEEEEeCCcccc
Confidence                   00  1122222221221    24788999999999999999842 2      79999999 54444

>PRK08204 hypothetical protein; Provisional

Probab=98.87  E-value=5.9e-07  Score=89.64  Aligned_cols=155  Identities=15%  Similarity=0.146  Sum_probs=89.8

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccC--CHHHHHHHHccCCCeeEE
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHIT--TMDAVKFVESCKEGFVAA  194 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvS--t~~~l~~i~~akg~~vt~  194 (346)
                      +.+.++++.+++.|.++.+|+........     ...+..+.   -+...+.++.|.|.+  +.+.++++++.   .++.
T Consensus       201 e~l~~~~~~A~~~g~~v~~H~~e~~~~~~-----~~~~~~l~---~~g~~~~~~~i~H~~~~~~~~~~~la~~---g~~v  269 (449)
T PRK08204        201 EVARADFRLARELGLPISMHQGFGPWGAT-----PRGVEQLH---DAGLLGPDLNLVHGNDLSDDELKLLADS---GGSF  269 (449)
T ss_pred             HHHHHHHHHHHHcCCcEEEEEcCCCcccC-----CCHHHHHH---HCCCCCCCeEEEecCCCCHHHHHHHHHc---CCCE
Confidence            67889999999999999999842211000     01121111   223456678888887  57778888753   3555


Q ss_pred             EccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHH
Q 019093          195 TVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALS  274 (346)
Q Consensus       195 Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp  274 (346)
                      -.||.+-.     +    .+.   -.||++         +.+..|.-=. +|||..+...          +-+-.+..+.
T Consensus       270 ~~~P~~~~-----~----~g~---~~~~~~---------~~~~~Gv~v~-lGtD~~~~~~----------~~~~~~~~~a  317 (449)
T PRK08204        270 SVTPEIEM-----M----MGH---GYPVTG---------RLLAHGVRPS-LGVDVVTSTG----------GDMFTQMRFA  317 (449)
T ss_pred             EEChHHHh-----h----hcC---CCCcHH---------HHHhcCCcee-eccccCCCCC----------cCHHHHHHHH
Confidence            67885321     1    111   124432         2344565555 8999754321          0000122222


Q ss_pred             HHHHHH---------------HhcCCHHHHHHHHchhhhhhcCCCC--------CCccEEEEe
Q 019093          275 LYAKVF---------------EEMGALDKLEAFTSFNGPDFYGLPR--------NTSKIKLTK  314 (346)
Q Consensus       275 ~l~~~~---------------~~~~~l~~lv~~~s~nPAki~gl~~--------kdAdlvi~d  314 (346)
                      +.....               ....+..+..++.+.|+|+.+|+..        |.|||+|+|
T Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~T~~gA~~lg~~~~~G~le~Gk~ADlvvld  380 (449)
T PRK08204        318 LQAERARDNAVHLREGGMPPPRLTLTARQVLEWATIEGARALGLEDRIGSLTPGKQADLVLID  380 (449)
T ss_pred             HHHHHhhcccccccccccCCCcCCCCHHHHHHHHhHHHHHHcCCCCCCcccCCCCcCCEEEEc
Confidence            211110               0224678999999999999999832        279999999

>PRK15493 5-methylthioadenosine/S-adenosylhomocysteine deaminase; Provisional

Probab=98.86  E-value=5.9e-07  Score=89.46  Aligned_cols=156  Identities=13%  Similarity=0.105  Sum_probs=92.6

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHH-----HHHHHHH--hCCCCcEEEEccC--CHHHHHHHHcc
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDT-----ILQPLIQ--RLPQLKVVMEHIT--TMDAVKFVESC  187 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~-----~l~~~la--~~~g~~lhi~HvS--t~~~l~~i~~a  187 (346)
                      +.+.++++.+++.|+++.+|+....       .|...+.+     .++ .+.  ...+.++.+.|..  +.+.++++++.
T Consensus       197 e~l~~~~~~A~~~g~~v~~H~~e~~-------~e~~~~~~~~g~~~~~-~l~~~Gll~~~~~~~H~~~l~~~d~~~la~~  268 (435)
T PRK15493        197 ELLEECARIAVENQTMVHIHLSETE-------REVRDIEAQYGKRPVE-YAASCGLFKRPTVIAHGVVLNDNERAFLAEH  268 (435)
T ss_pred             HHHHHHHHHHHHcCCcEEEEeCCCH-------HHHHHHHHHhCCCHHH-HHHHcCCCCCCcEEEEeecCCHHHHHHHHHc
Confidence            7899999999999999999986432       11111111     111 122  2345677777766  67788888764


Q ss_pred             CCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCcc
Q 019093          188 KEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIY  267 (346)
Q Consensus       188 kg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~  267 (346)
                         .+.+-.||..-      +.- +.+     .+|++         +.+..|.-=. +|||..+-.        .... .
T Consensus       269 ---g~~v~~~P~sn------~~l-~~g-----~~p~~---------~~~~~Gv~v~-lGtD~~~~~--------~~~d-~  314 (435)
T PRK15493        269 ---DVRVAHNPNSN------LKL-GSG-----IANVK---------AMLEAGIKVG-IATDSVASN--------NNLD-M  314 (435)
T ss_pred             ---CCeEEEChHHH------HHH-hcC-----cccHH---------HHHHCCCeEE-EccCccccC--------CCcC-H
Confidence               34556788641      110 111     24433         3344465445 899974310        0000 1


Q ss_pred             chhHHHHHHHHHHHh----cCCHHHHHHHHchhhhhhcCCCC-------CCccEEEEe
Q 019093          268 NAPVALSLYAKVFEE----MGALDKLEAFTSFNGPDFYGLPR-------NTSKIKLTK  314 (346)
Q Consensus       268 g~e~~lp~l~~~~~~----~~~l~~lv~~~s~nPAki~gl~~-------kdAdlvi~d  314 (346)
                      --|..++.++.....    ..++++++++.+.|||+.+|++.       +.|||+++|
T Consensus       315 ~~~~~~a~~~~~~~~~~~~~~~~~~~l~~aT~~gA~~lg~~~~G~l~~G~~ADlvv~d  372 (435)
T PRK15493        315 FEEMRIATLLQKGIHQDATALPVETALTLATKGAAEVIGMKQTGSLEVGKCADFITID  372 (435)
T ss_pred             HHHHHHHHHHHhhccCCCCcCCHHHHHHHHhHHHHHHcCCCCCCccCCCCcCCEEEEc
Confidence            124555555432211    24788999999999999999852       279999999

>cd01293 Bact_CD Bacterial cytosine deaminase and related metal-dependent hydrolases

Probab=98.85  E-value=4.3e-07  Score=88.60  Aligned_cols=166  Identities=15%  Similarity=0.085  Sum_probs=86.5

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCC--CcEEEEccCCH---------HHHHHHH
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQ--LKVVMEHITTM---------DAVKFVE  185 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g--~~lhi~HvSt~---------~~l~~i~  185 (346)
                      +.+.++++.+++.|.++.+|+...... ..     ..+.+.+  ..++..|  .++.+.|....         +.+++++
T Consensus       189 e~l~~~~~~A~~~g~~v~~H~~e~~~~-~~-----~~~~~~~--~~~~~~g~~~~~~i~H~~~~~~~~~~~~~~~~~~l~  260 (398)
T cd01293         189 ESLDTLFELAQEHGLDIDLHLDETDDP-GS-----RTLEELA--EEAERRGMQGRVTCSHATALGSLPEAEVSRLADLLA  260 (398)
T ss_pred             HHHHHHHHHHHHhCCCCEEEeCCCCCc-ch-----hHHHHHH--HHHHHhCCCCCEEeeecchhhcCCHHHHHHHHHHHH
Confidence            678899999999999999998643210 00     1112223  2223333  36788887643         2355555


Q ss_pred             ccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCC
Q 019093          186 SCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAG  265 (346)
Q Consensus       186 ~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G  265 (346)
                      +   ..+....||..-...... ..        ..|. +  .....+-+.++.|.-=. +|||..+-       ++...|
T Consensus       261 ~---~g~~v~~~p~s~~~l~~~-~~--------~~~~-~--~~~~~~~~~~~~Gv~v~-lGTD~~~~-------~~~~~~  317 (398)
T cd01293         261 E---AGISVVSLPPINLYLQGR-ED--------TTPK-R--RGVTPVKELRAAGVNVA-LGSDNVRD-------PWYPFG  317 (398)
T ss_pred             H---cCCeEEeCCCcchhhccc-cc--------CCCC-C--CCCCcHHHHHHCCCeEE-ECCCCCCC-------CCcCCC
Confidence            4   345667788532211100 00        0111 0  11122444555676555 89998421       011111


Q ss_pred             ccc-hhHHHHHHHHHH--HhcCCHHHHHHHHchhhhhhcCCC------CCCccEEEEe
Q 019093          266 IYN-APVALSLYAKVF--EEMGALDKLEAFTSFNGPDFYGLP------RNTSKIKLTK  314 (346)
Q Consensus       266 ~~g-~e~~lp~l~~~~--~~~~~l~~lv~~~s~nPAki~gl~------~kdAdlvi~d  314 (346)
                      ... ++.+. +.....  ....+.++..++.+.|+|+.+|+.      .|.|||+++|
T Consensus       318 ~~~~~~~~~-~~~~~~~~~~~~~~~~al~~aT~~~A~~lg~~~G~l~~Gk~ADlv~~d  374 (398)
T cd01293         318 SGDMLEVAN-LAAHIAQLGTPEDLALALDLITGNAARALGLEDYGIKVGCPADLVLLD  374 (398)
T ss_pred             CCCHHHHHH-HHHHHHcCCChhhHHHHHHhcChhhhhhcCCcCcccccCCcceEEEEC
Confidence            111 11111 111110  011134689999999999999962      2489999998

Cytosine deaminases (CDs) catalyze the deamination of cytosine, producing uracil and ammonia. They play an important role in pyrimidine salvage. CDs are present in prokaryotes and fungi, but not mammalian cells. The bacterial enzymes, but not the fungal enzymes, are related to the adenosine deaminases (ADA). The bacterial enzymes are iron dependent and hexameric.

>COG1228 HutI Imidazolonepropionase and related amidohydrolases [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=98.85  E-value=4.5e-08  Score=96.19  Aligned_cols=89  Identities=15%  Similarity=0.217  Sum_probs=53.7

Q ss_pred             HHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHhc-CCHHHHHHHHchhhhhhcCCCC--------
Q 019093          235 AVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEM-GALDKLEAFTSFNGPDFYGLPR--------  305 (346)
Q Consensus       235 al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~~-~~l~~lv~~~s~nPAki~gl~~--------  305 (346)
                      +++.|.-=+ ++|||-|-+.              . ..+.+.....++. .+.++.++..+.|||+++|+..        
T Consensus       302 l~~~GV~va-i~TD~~~~~~--------------~-~~l~~~m~l~~~~gmtp~EaL~a~T~naA~alG~~~~~Gsle~G  365 (406)
T COG1228         302 LIDAGVKVA-IGTDHNPGTS--------------H-GSLALEMALAVRLGMTPEEALKAATINAAKALGLADKVGSLEPG  365 (406)
T ss_pred             HHHCCCEEE-EEcCCCCCch--------------h-hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCccccccccCC
Confidence            455566666 9999966431              0 1233333333444 4888999999999999999853        


Q ss_pred             CCccEEEEe-ccee-ecCCccccCCcccccCCCcEEE
Q 019093          306 NTSKIKLTK-IPWK-VPEAFSFSFGDIIPMFAGNTLE  340 (346)
Q Consensus       306 kdAdlvi~d-~~~~-v~~~~~~s~~~~sp~~~G~~l~  340 (346)
                      |+|||+||| .++. +.-..-.++..+... +|..+.
T Consensus       366 k~ADlvv~~~dp~~~i~y~~~~~~v~~v~k-~G~~~~  401 (406)
T COG1228         366 KDADLVVWDGDPLADIPYFLGLNKVEAVIK-DGKVVY  401 (406)
T ss_pred             CccCEEEEcCCChhhccccccCCceEEEEE-CCEEee
Confidence            399999998 3321 111112334445555 365543

>cd01310 TatD_DNAse TatD like proteins; E

Probab=98.84  E-value=2.2e-07  Score=84.84  Aligned_cols=233  Identities=18%  Similarity=0.087  Sum_probs=116.0

Q ss_pred             ccccceecCC-Ccc-c-ccccccc-CCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCC--C
Q 019093            8 PDDWHLHLRD-GDL-L-KAVVPHS-VSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTT--S   81 (346)
Q Consensus         8 ~ID~HvH~r~-g~~-~-ke~~~s~-sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~--~   81 (346)
                      +||.|+|+.. ... . .+.+... .-|+++++.|... +     +..+...+.+++ .   .++....++  .|..  .
T Consensus         1 ~~D~H~H~~~~~~~~~~~~~l~~~~~~gv~~~v~~~~~-~-----~~~~~~~~la~~-~---~~i~~~~G~--hP~~~~~   68 (251)
T cd01310           1 LIDTHCHLDFPQFDADRDDVLARAREAGVIKIIVVGTD-L-----KSSKRALELAKK-Y---DNVYAAVGL--HPHDADE   68 (251)
T ss_pred             CEEeeeCCCchhhccCHHHHHHHHHHcCCCEEEEeCCC-H-----HHHHHHHHHHHh-C---CCeEEEEee--Ccchhhc
Confidence            5899999976 211 1 2222221 2578888888532 1     222233332222 1   233333333  4431  1


Q ss_pred             -----HHHHHHHHHcCCeeEE-EEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHH
Q 019093           82 -----PDEIKLARKTGVVFAV-KLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFID  155 (346)
Q Consensus        82 -----~~el~~l~~~G~v~~~-Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~  155 (346)
                           .+++.+..+...+.++ ++-+.+......... +. ..++.+++.+++.|+||++||....             .
T Consensus        69 ~~~~~~~~l~~~~~~~~~~~IGeiGld~~~~~~~~~~-q~-~~~~~~~~~a~e~~~pv~iH~~~~~-------------~  133 (251)
T cd01310          69 HVDEDLDLLELLAANPKVVAIGEIGLDYYRDKSPREV-QK-EVFRAQLELAKELNLPVVIHSRDAH-------------E  133 (251)
T ss_pred             CCHHHHHHHHHHhcCCCEEEEEeeecCcCCCCCCHHH-HH-HHHHHHHHHHHHhCCCeEEEeeCch-------------H
Confidence                 3345555443225666 554321100000011 22 6788899999999999999998641             1


Q ss_pred             HHHHHHHHhCCC-CcEEEEccCC--HHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHH
Q 019093          156 TILQPLIQRLPQ-LKVVMEHITT--MDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAV  232 (346)
Q Consensus       156 ~~l~~~la~~~g-~~lhi~HvSt--~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL  232 (346)
                      .++  .+++..+ .+..|.|..+  .+.++.+.+   .+++.++++-.+.                     +.......+
T Consensus       134 ~~~--~l~~~~~~~~~~i~H~~~~~~~~~~~~~~---~g~~~~~~~~~~~---------------------~~~~~~~~~  187 (251)
T cd01310         134 DVL--EILKEYGPPKRGVFHCFSGSAEEAKELLD---LGFYISISGIVTF---------------------KNANELREV  187 (251)
T ss_pred             HHH--HHHHhcCCCCCEEEEccCCCHHHHHHHHH---cCCEEEeeeeecc---------------------CCCHHHHHH
Confidence            233  3333333 3344556553  233333332   3456666552110                     011112223


Q ss_pred             HHHHHcCCcc-EEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHH--hcCCHHHHHHHHchhhhhhcC
Q 019093          233 VSAVTSGSRK-FFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFE--EMGALDKLEAFTSFNGPDFYG  302 (346)
Q Consensus       233 ~~al~~G~Id-~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~--~~~~l~~lv~~~s~nPAki~g  302 (346)
                         ++.+-.| ++++||+ |.....+..     |-.+....++-++..+.  ...+.+.+.+++..||+|+||
T Consensus       188 ---~~~~~~dril~~TD~-p~~~~~~~~-----~~~~~~~~~~~~~~~la~~~gl~~e~~~~~~~~N~~~ll~  251 (251)
T cd01310         188 ---VKEIPLERLLLETDS-PYLAPVPFR-----GKRNEPAYVKHVAEKIAELKGISVEEVAEVTTENAKRLFG  251 (251)
T ss_pred             ---HHhCChHHEEEcccC-CCCCCCCCC-----CCCCCChhHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhC
Confidence               3333334 3389998 654332211     11233344665554433  334889999999999999987

coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity.

>cd01300 YtcJ_like YtcJ_like metal dependent amidohydrolases

Probab=98.78  E-value=1.2e-07  Score=95.36  Aligned_cols=166  Identities=14%  Similarity=0.085  Sum_probs=101.5

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHh--CCCCcEEEEccC--CHHHHHHHHccCCCee
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQR--LPQLKVVMEHIT--TMDAVKFVESCKEGFV  192 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~--~~g~~lhi~HvS--t~~~l~~i~~akg~~v  192 (346)
                      +.+.++++.+++.|.++.+||.....        ...+-+.++....+  ..+++..|.|.+  +.+.++.+++   ..+
T Consensus       295 e~l~~~~~~a~~~g~~v~~Ha~gd~~--------i~~~l~~~~~~~~~~g~~~~r~~i~H~~~~~~~~~~~l~~---~gv  363 (479)
T cd01300         295 EELEELVRAADEAGLQVAIHAIGDRA--------VDTVLDALEAALKDNPRADHRHRIEHAQLVSPDDIPRFAK---LGV  363 (479)
T ss_pred             HHHHHHHHHHHHCCCCEEEEEecHHH--------HHHHHHHHHHHHHhcCCCCCCceeeecccCCHHHHHHHHH---cCC
Confidence            78999999999999999999985421        00111111101112  236789999998  5666776665   357


Q ss_pred             EEEccchhhccchhhhccCCCC-CceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhH
Q 019093          193 AATVTPQHLVLNRNALFQGGLR-PHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPV  271 (346)
Q Consensus       193 t~Et~ph~L~l~~~~~~~~~~~-~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~  271 (346)
                      .+++||+|+++..+.......+ .+.+..||+|         +.+..|...+ ++||+.+.. .+   ++     .+++.
T Consensus       364 ~~~~~P~~~~~~~~~~~~~~lg~~~~~~~~p~~---------~~~~~Gv~v~-lGSD~~~~~-~~---p~-----~~~~~  424 (479)
T cd01300         364 IASVQPNHLYSDGDAAEDRRLGEERAKRSYPFR---------SLLDAGVPVA-LGSDAPVAP-PD---PL-----LGIWA  424 (479)
T ss_pred             ceEeCcccccCchHHHHHhcccHHHHhcCchHH---------HHHHCCCeee-ccCCCCCCC-CC---HH-----HHHHH
Confidence            8899999998765543210011 2345566655         4566788888 899994332 11   10     11111


Q ss_pred             HHHHH-HH-----HHHhcCCHHHHHHHHchhhhhhcCCC-C-------CCccEEE
Q 019093          272 ALSLY-AK-----VFEEMGALDKLEAFTSFNGPDFYGLP-R-------NTSKIKL  312 (346)
Q Consensus       272 ~lp~l-~~-----~~~~~~~l~~lv~~~s~nPAki~gl~-~-------kdAdlvi  312 (346)
                      .+... ..     .-.+..++++++++.+.|||+.+|+. +       |.|||+|
T Consensus       425 av~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lg~e~~~GsLe~Gk~ADlvv  479 (479)
T cd01300         425 AVTRKTPGGGVLGNPEERLSLEEALRAYTIGAAYAIGEEDEKGSLEPGKLADFVV  479 (479)
T ss_pred             HheeeCCCCCCCCCccccCCHHHHHHHHHHHHHHHhccccccccccCCcccceeC
Confidence            11100 00     01224589999999999999999983 3       1799875

YtcJ is a Bacillus subtilis ORF of unknown function. The Arabidopsis homolog LAF3 has been identified as a factor required for photochrome A signalling.

>PRK07203 putative chlorohydrolase/aminohydrolase; Validated

Probab=98.77  E-value=1.2e-06  Score=87.40  Aligned_cols=151  Identities=10%  Similarity=0.042  Sum_probs=89.2

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHH-----HHHHHHH--hCCCCcEEEEccC--CHHHHHHHHcc
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDT-----ILQPLIQ--RLPQLKVVMEHIT--TMDAVKFVESC  187 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~-----~l~~~la--~~~g~~lhi~HvS--t~~~l~~i~~a  187 (346)
                      +.+.++.+.+++.|+++.+|.-....       |...+.+     .++ .+.  ...+.++.+.|..  +.+.++++++.
T Consensus       205 ~~l~~~~~lA~~~g~~i~~H~~E~~~-------e~~~~~~~~g~~~v~-~l~~~Gll~~~~~~~H~~~~~~~d~~~la~~  276 (442)
T PRK07203        205 ATLEKCREAVKETGRGYHIHVAEGIY-------DVSDSHKKYGKDIVE-RLADFGLLGEKTLAAHCIYLSDEEIDLLKET  276 (442)
T ss_pred             HHHHHHHHHHHHcCCcEEEEecCChH-------HHHHHHHHcCCCHHH-HHHhCCCCCCCcEEEEeecCCHHHHHHHHhc
Confidence            67888999999999999999875421       1111111     111 122  2356777777766  66778888864


Q ss_pred             CCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCcc
Q 019093          188 KEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIY  267 (346)
Q Consensus       188 kg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~  267 (346)
                         .+.+-.||.      ++..- +  .   -.||+         ++.+..|.-=. +|||-...              .
T Consensus       277 ---g~~v~~~P~------sn~~l-~--~---g~~p~---------~~~~~~Gv~v~-lGtD~~~~--------------d  317 (442)
T PRK07203        277 ---DTFVVHNPE------SNMGN-A--V---GYNPV---------LEMIKNGILLG-LGTDGYTS--------------D  317 (442)
T ss_pred             ---CCeEEECch------hhhhc-c--c---CCCCH---------HHHHHCCCeEE-EcCCCCCc--------------c
Confidence               356677994      22211 1  1   12443         34555676655 89995211              0


Q ss_pred             ch-hHHHHHHHHHHHhcC---CHHHHHHHHchhhhhhcC--CC-C-------CCccEEEEe
Q 019093          268 NA-PVALSLYAKVFEEMG---ALDKLEAFTSFNGPDFYG--LP-R-------NTSKIKLTK  314 (346)
Q Consensus       268 g~-e~~lp~l~~~~~~~~---~l~~lv~~~s~nPAki~g--l~-~-------kdAdlvi~d  314 (346)
                      -+ |..+..+........   +++++.++...|+||.+|  +. +       |.|||+++|
T Consensus       318 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~aT~~gA~~lg~~~~~~~G~l~~G~~ADlvv~d  378 (442)
T PRK07203        318 MFESYKVANFKHKHAGGDPNVGWPESPAMLFENNNKIAERYFGAKFGILEEGAKADLIIVD  378 (442)
T ss_pred             HHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCccCEEEEc
Confidence            01 333433332211111   367888999999999988  32 1       289999999

>PRK07213 chlorohydrolase; Provisional

Probab=98.75  E-value=1.6e-06  Score=84.60  Aligned_cols=150  Identities=14%  Similarity=0.144  Sum_probs=85.6

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHH-HHH----HHHHHHHhCCCCc-EEEEccC--CHHHHHHHHccC
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVF-IDT----ILQPLIQRLPQLK-VVMEHIT--TMDAVKFVESCK  188 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~a-v~~----~l~~~la~~~g~~-lhi~HvS--t~~~l~~i~~ak  188 (346)
                      +.+.++++.+++.|.++.+|+.....       |... ..+    -+  ..+...|.. -.+.|..  +.+.++++++. 
T Consensus       179 ~~l~~~~~~A~~~g~~v~~H~~e~~~-------e~~~~~~~~G~~~v--~~~~~~G~~~~~i~H~~~~~~~~i~~la~~-  248 (375)
T PRK07213        179 EELKFICKECKREKKIFSIHAAEHKG-------SVEYSLEKYGMTEI--ERLINLGFKPDFIVHATHPSNDDLELLKEN-  248 (375)
T ss_pred             HHHHHHHHHHHHcCCEEEEeeCCchh-------HHHHHHHHcCCChH--HHHHhcCCCCCEEEECCCCCHHHHHHHHHc-
Confidence            78899999999999999999964321       1100 000    01  122223433 1256655  56678888764 


Q ss_pred             CCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccc
Q 019093          189 EGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYN  268 (346)
Q Consensus       189 g~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g  268 (346)
                        .+++..||..      ...   ++.   -.||+         .+.++.|. .+-+|||..+..          .+-.-
T Consensus       249 --g~~v~~~P~s------n~~---l~~---g~~~v---------~~l~~~Gv-~v~lGTD~~~~~----------~~~~~  294 (375)
T PRK07213        249 --NIPVVVCPRA------NAS---FNV---GLPPL---------NEMLEKGI-LLGIGTDNFMAN----------SPSIF  294 (375)
T ss_pred             --CCcEEECCcc------hhh---hcc---CCccH---------HHHHHCCC-EEEEeeCCCCCc----------hHhHH
Confidence              4667889941      111   011   12443         34455565 444899975421          00000


Q ss_pred             hhHHHHHHHHHHHhcCCHHHHHHHHchhhhhhcCCCC-------CCccEEEEe
Q 019093          269 APVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLPR-------NTSKIKLTK  314 (346)
Q Consensus       269 ~e~~lp~l~~~~~~~~~l~~lv~~~s~nPAki~gl~~-------kdAdlvi~d  314 (346)
                      -|..+  ++.  ....+..++.++.+.|+|+.+|++.       +.|||+++|
T Consensus       295 ~e~~~--~~~--~~~~~~~~~l~~aT~~gA~~lg~~~~G~l~~G~~ADlvv~d  343 (375)
T PRK07213        295 REMEF--IYK--LYHIEPKEILKMATINGAKILGLINVGLIEEGFKADFTFIK  343 (375)
T ss_pred             HHHHH--HHH--HhCcCHHHHHHHHHHHHHHHhCCCCcCCcCCCCcccEEEEc
Confidence            11111  111  1235788999999999999998732       279999999

>PRK12393 amidohydrolase; Provisional

Probab=98.75  E-value=1.9e-06  Score=86.37  Aligned_cols=154  Identities=13%  Similarity=0.111  Sum_probs=87.4

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHH-----HHHHHHH--hCCCCcEEEEccC--CHHHHHHHHcc
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDT-----ILQPLIQ--RLPQLKVVMEHIT--TMDAVKFVESC  187 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~-----~l~~~la--~~~g~~lhi~HvS--t~~~l~~i~~a  187 (346)
                      +.+.++++.+++.|.++.+|+....       .|.+...+     -++ .+.  ...+.++.+.|..  +.+.++++++.
T Consensus       218 e~l~~~~~~a~~~g~~~~~H~~e~~-------~~~~~~~~~~g~~~~~-~l~~~g~l~~~~~~~H~~~l~~~d~~~la~~  289 (457)
T PRK12393        218 ELLREVARAARGMGLRLHSHLSETV-------DYVDFCREKYGMTPVQ-FVAEHDWLGPDVWFAHLVKLDAEEIALLAQT  289 (457)
T ss_pred             HHHHHHHHHHHHcCCeEEEEeCCCH-------HHHHHHHHHhCCCHHH-HHHHcCCCCCCeEEEEEecCCHHHHHHHHHc
Confidence            6788999999999999999996321       11111100     010 111  2235565555554  57788888764


Q ss_pred             CCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCcc
Q 019093          188 KEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIY  267 (346)
Q Consensus       188 kg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~  267 (346)
                         .+.+-.||..      ...   ++.   -.||+|         +.+..|.-=. +|||..+..           +..
T Consensus       290 ---g~~v~~~P~s------n~~---lg~---g~~~~~---------~~~~~Gv~v~-lGtD~~~~~-----------~~~  333 (457)
T PRK12393        290 ---GTGIAHCPQS------NGR---LGS---GIAPAL---------AMEAAGVPVS-LGVDGAASN-----------ESA  333 (457)
T ss_pred             ---CCeEEECchh------hhh---hcc---cCCCHH---------HHHHCCCeEE-EecCCcccC-----------CCc
Confidence               4666788842      111   111   124433         3444565445 899964311           001


Q ss_pred             ch--hHHHHHHHHHHH---hcCCHHHHHHHHchhhhhhcCCCC-C------CccEEEEe
Q 019093          268 NA--PVALSLYAKVFE---EMGALDKLEAFTSFNGPDFYGLPR-N------TSKIKLTK  314 (346)
Q Consensus       268 g~--e~~lp~l~~~~~---~~~~l~~lv~~~s~nPAki~gl~~-k------dAdlvi~d  314 (346)
                      ..  +..+..+.....   ...++++++++++.|||+++|++. +      .|||+|+|
T Consensus       334 d~~~~~~~a~~~~~~~~~~~~~~~~~~l~~~T~~~A~~l~~~~~G~l~~G~~ADlvv~d  392 (457)
T PRK12393        334 DMLSEAHAAWLLHRAEGGADATTVEDVVHWGTAGGARVLGLDAIGTLAVGQAADLAIYD  392 (457)
T ss_pred             cHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHhHHHHHHhCCCCCCCcCCCCcCCEEEEe
Confidence            11  111222211110   124788999999999999999842 2      79999999

>PRK09228 guanine deaminase; Provisional

Probab=98.66  E-value=5.6e-06  Score=82.42  Aligned_cols=154  Identities=16%  Similarity=0.099  Sum_probs=91.0

Q ss_pred             HHHHHHHHHhHHc-CCcEEEecCCCCCCCChhhhHHHHHHH-------HHHHHHH--hCCCCcEEEEccC--CHHHHHHH
Q 019093          117 GKCVHVLEEMVEQ-NMPLLVHGEVTDPIVDIFDREKVFIDT-------ILQPLIQ--RLPQLKVVMEHIT--TMDAVKFV  184 (346)
Q Consensus       117 ~~l~~~l~~~~~~-g~~v~vHaE~~~~~~~~~~~E~~av~~-------~l~~~la--~~~g~~lhi~HvS--t~~~l~~i  184 (346)
                      +.+.++.+.++++ |.++.+|......       |...+.+       .++ .+.  ...+.++.+.|..  +.+.++++
T Consensus       211 ~~l~~~~~lA~~~~~~~i~~Hl~E~~~-------e~~~~~~~~g~~~~~~~-~l~~~G~l~~~~~~~H~~~l~~~~~~~l  282 (433)
T PRK09228        211 EQLEAAGALAREHPDVWIQTHLSENLD-------EIAWVKELFPEARDYLD-VYERYGLLGPRAVFAHCIHLEDRERRRL  282 (433)
T ss_pred             HHHHHHHHHHHHCCCCceEEeecCChh-------HHHHHHHHcCCCCCHHH-HHHHcCCCCCCeEEEeccCCCHHHHHHH
Confidence            6788999999997 9999999875421       1111111       111 122  2246688888887  67778888


Q ss_pred             HccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCC
Q 019093          185 ESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCA  264 (346)
Q Consensus       185 ~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~  264 (346)
                      ++.   .+.+..||..      .+.- +.+     .+|+         .+.++.|.--. +|||..+-.           
T Consensus       283 a~~---g~~v~~~P~s------n~~l-g~g-----~~~~---------~~~~~~Gv~v~-lGtD~~~~~-----------  326 (433)
T PRK09228        283 AET---GAAIAFCPTS------NLFL-GSG-----LFDL---------KRADAAGVRVG-LGTDVGGGT-----------  326 (433)
T ss_pred             HHc---CCeEEECCcc------HHhh-cCC-----CcCH---------HHHHHCCCeEE-EecCCCCCC-----------
Confidence            764   4566788852      1110 111     2333         34555686566 899963210           


Q ss_pred             Cccchh-HHHHHHHHHHHh-cCCHHHHHHHHchhhhhhcCCCC--------CCccEEEEe
Q 019093          265 GIYNAP-VALSLYAKVFEE-MGALDKLEAFTSFNGPDFYGLPR--------NTSKIKLTK  314 (346)
Q Consensus       265 G~~g~e-~~lp~l~~~~~~-~~~l~~lv~~~s~nPAki~gl~~--------kdAdlvi~d  314 (346)
                      ...-++ ..+......... ..+.++++++.+.|||+++|++.        |.|||+++|
T Consensus       327 ~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~~A~~lg~~~~~G~l~~Gk~ADlvv~d  386 (433)
T PRK09228        327 SFSMLQTMNEAYKVQQLQGYRLSPFQAFYLATLGGARALGLDDRIGNLAPGKEADFVVLD  386 (433)
T ss_pred             CCCHHHHHHHHHHHhhcccCCCCHHHHHHHHhHHHHHHhCCCCCCcccCCCCCCCEEEEc
Confidence            001111 112111211112 23788999999999999999842        279999999

>cd01313 Met_dep_hydrolase_E Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site

Probab=98.64  E-value=9.5e-06  Score=80.39  Aligned_cols=151  Identities=15%  Similarity=0.095  Sum_probs=89.9

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHH-----HHHHHHHHh--CCCCcEEEEccC--CHHHHHHHHcc
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFID-----TILQPLIQR--LPQLKVVMEHIT--TMDAVKFVESC  187 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~-----~~l~~~la~--~~g~~lhi~HvS--t~~~l~~i~~a  187 (346)
                      +.+.++++.+++ |.++.+|+.+..       .|...+.     +-++ .+++  ..+.++.+.|..  +.+.++++++.
T Consensus       207 e~l~~~~~~a~~-g~~i~~H~~e~~-------~e~~~~~~~~g~~~i~-~l~~~g~l~~~~~~~H~~~l~~~~~~~la~~  277 (418)
T cd01313         207 EQLAALAALASE-KAPVHIHLAEQP-------KEVDDCLAAHGRRPVE-LLLDHGHLDARWCLVHATHLTDNETLLLGRS  277 (418)
T ss_pred             HHHHHHHHHHhc-CCceEEEeCCCH-------HHHHHHHHHcCCCHHH-HHHHcCCCCCCEEEEeCCCCCHHHHHHHHHc
Confidence            789999999999 999999994321       1111111     1111 2222  356777888877  67788888864


Q ss_pred             CCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCcc
Q 019093          188 KEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIY  267 (346)
Q Consensus       188 kg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~  267 (346)
                         .+++-.||..-+.         .+.   -.||+|         +.+..|.-=. +|||- +.+            ..
T Consensus       278 ---g~~v~~~P~sn~~---------lg~---g~~p~~---------~l~~~Gv~v~-lGtD~-~~~------------~d  319 (418)
T cd01313         278 ---GAVVGLCPTTEAN---------LGD---GIFPAA---------ALLAAGGRIG-IGSDS-NAR------------ID  319 (418)
T ss_pred             ---CCEEEECCCchhh---------ccC---CCCCHH---------HHHHCCCcEE-EecCC-CCC------------cC
Confidence               4677789953211         111   125544         2344565455 89993 211            11


Q ss_pred             chhHHHHH-H-HHHHH---------hcCCHHHHHHHHchhhhhhcCCCC------CCccEEEEe
Q 019093          268 NAPVALSL-Y-AKVFE---------EMGALDKLEAFTSFNGPDFYGLPR------NTSKIKLTK  314 (346)
Q Consensus       268 g~e~~lp~-l-~~~~~---------~~~~l~~lv~~~s~nPAki~gl~~------kdAdlvi~d  314 (346)
                      -++.+..+ + .....         ...+..++.++.+.|+|+.+|++.      |.|||+++|
T Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~gA~alg~~~Gsle~Gk~ADlvvld  383 (418)
T cd01313         320 LLEELRQLEYSQRLRDRARNVLATAGGSSARALLDAALAGGAQALGLATGALEAGARADLLSLD  383 (418)
T ss_pred             HHHHHHHHHHHHHHHhcccccccccCCCCHHHHHHHHHHHHHHHhCCCCCeECCCCccCEEEEc
Confidence            12222211 1 11111         134788999999999999999742      379999999

The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.

>PRK06846 putative deaminase; Validated

Probab=98.63  E-value=5.3e-06  Score=81.96  Aligned_cols=23  Identities=13%  Similarity=0.010  Sum_probs=20.5

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCC
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEV  139 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~  139 (346)
                      +.+.++++.++++|+++.+|.-.
T Consensus       206 ~~l~~~~~lA~~~g~~v~~Hv~e  228 (410)
T PRK06846        206 KSLDTMFQIAVDFNKGVDIHLHD  228 (410)
T ss_pred             HHHHHHHHHHHHhCCCcEEEECC
Confidence            67899999999999999999764

>cd01303 GDEase Guanine deaminase (GDEase)

Probab=98.62  E-value=1.1e-05  Score=80.17  Aligned_cols=154  Identities=14%  Similarity=0.106  Sum_probs=89.2

Q ss_pred             HHHHHHHHHhHHcC-CcEEEecCCCCCCCChhhhHHHHHHH-------HHHHHHH--hCCCCcEEEEccC--CHHHHHHH
Q 019093          117 GKCVHVLEEMVEQN-MPLLVHGEVTDPIVDIFDREKVFIDT-------ILQPLIQ--RLPQLKVVMEHIT--TMDAVKFV  184 (346)
Q Consensus       117 ~~l~~~l~~~~~~g-~~v~vHaE~~~~~~~~~~~E~~av~~-------~l~~~la--~~~g~~lhi~HvS--t~~~l~~i  184 (346)
                      +.+.++++.+++.| .++.+|+....       .|.+.+.+       .++ .+.  ...|.++.+.|..  +.+.++++
T Consensus       208 e~l~~~~~~A~~~g~~~v~~H~~e~~-------~e~~~~~~~~g~~~~p~~-~l~~~G~l~~~~~l~H~~~l~~~~~~~l  279 (429)
T cd01303         208 ELLAALGKLAKEHPDLHIQTHISENL-------DEIAWVKELFPGARDYLD-VYDKYGLLTEKTVLAHCVHLSEEEFNLL  279 (429)
T ss_pred             HHHHHHHHHHHHCCCCeEEEeeCCCH-------HHHHHHHHHcCCCCCHHH-HHHHCCCCCCCcEEEeCCCCCHHHHHHH
Confidence            78999999999999 99999985321       11111111       111 122  2335678888877  56778888


Q ss_pred             HccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCC
Q 019093          185 ESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCA  264 (346)
Q Consensus       185 ~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~  264 (346)
                      ++.   .+.+-.||..-      +.   ++.   -.+|+         .+.+..|.--. +|||..+-.           
T Consensus       280 ~~~---g~~v~~~P~sn------~~---l~~---g~~~~---------~~~~~~Gv~v~-lGtD~~~~~-----------  323 (429)
T cd01303         280 KER---GASVAHCPTSN------LF---LGS---GLFDV---------RKLLDAGIKVG-LGTDVGGGT-----------  323 (429)
T ss_pred             HHc---CCEEEECccch------hh---hcc---CCCCH---------HHHHHCCCeEE-EeccCCCCC-----------
Confidence            764   45666788421      11   010   12333         34555566555 899974210           


Q ss_pred             Cccch-hHHHHHHHHHHHh-------cCCHHHHHHHHchhhhhhcCCCC--------CCccEEEEe
Q 019093          265 GIYNA-PVALSLYAKVFEE-------MGALDKLEAFTSFNGPDFYGLPR--------NTSKIKLTK  314 (346)
Q Consensus       265 G~~g~-e~~lp~l~~~~~~-------~~~l~~lv~~~s~nPAki~gl~~--------kdAdlvi~d  314 (346)
                      ...-+ +..+-........       ..+.+++.++.+.||||.+|++.        |.|||+|+|
T Consensus       324 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~aT~~gA~~lg~~~~~Gsle~Gk~ADlvvld  389 (429)
T cd01303         324 SFSMLDTLRQAYKVSRLLGYELGGHAKLSPAEAFYLATLGGAEALGLDDKIGNFEVGKEFDAVVID  389 (429)
T ss_pred             CccHHHHHHHHHHHHHhhccccCCcCCCCHHHHHHHHhhHHHHHcCCCCCCcCcCCCCccCEEEEc
Confidence            00001 1111111111111       13678999999999999999842        279999999

Guanine deaminase is an aminohydrolase responsible for the conversion of guanine to xanthine and ammonia, the first step to utilize guanine as a nitrogen source. This reaction also removes the guanine base from the pool and therefore can play a role in the regulation of cellular GTP and the guanylate nucleotide pool.

>TIGR03314 Se_ssnA putative selenium metabolism protein SsnA

Probab=98.59  E-value=5.4e-06  Score=82.70  Aligned_cols=162  Identities=11%  Similarity=0.049  Sum_probs=90.3

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHH-----HHHHHHH--HhCCCCcEEEEccC--CHHHHHHHHcc
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFID-----TILQPLI--QRLPQLKVVMEHIT--TMDAVKFVESC  187 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~-----~~l~~~l--a~~~g~~lhi~HvS--t~~~l~~i~~a  187 (346)
                      ..+.++.+.+++.|+++.+|+-...       .|...+.     +.++ .+  ....+.++.+.|..  +.+.++++++.
T Consensus       204 ~~l~~~~~lA~~~~~~i~~H~~E~~-------~e~~~~~~~~g~~~~~-~l~~~G~l~~~~~~~H~~~~~~~d~~~la~~  275 (441)
T TIGR03314       204 AGLEMCREAVQATGRGFHIHVAEDI-------YDVEDSHHKYGKDIVE-RLADFGLLGSKTLAAHCIYLSDREIELLNET  275 (441)
T ss_pred             HHHHHHHHHHHHcCCCEEEEcCCCH-------HHHHHHHHHcCCCHHH-HHHHCCCCCCCeEEEEEecCCHHHHHHHHHc
Confidence            6788889999999999999987532       1111110     1111 11  12446677667765  67788888874


Q ss_pred             CCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCcc
Q 019093          188 KEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIY  267 (346)
Q Consensus       188 kg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~  267 (346)
                         .+++=.||-      ++..- +  .   --||++         +.+..|. .+-||||-.+...             
T Consensus       276 ---g~~v~~cP~------sn~~l-~--~---G~~p~~---------~~~~~Gv-~v~LGtD~~~~d~-------------  317 (441)
T TIGR03314       276 ---DTFVVHNPE------SNMGN-A--V---GYNPVL---------RMFKNGI-LLGLGTDGYTSDM-------------  317 (441)
T ss_pred             ---CCcEEECHH------HHhhh-c--c---CCCCHH---------HHHHCCC-EEEEcCCCCCcCH-------------
Confidence               355667883      22211 1  1   125544         3344464 4448999632110             


Q ss_pred             chhHHHHHHHHHHHhcC---CHHHHHHHHchhhhhhcC---------C-CCCCccEEEEe--cceeecCCcc
Q 019093          268 NAPVALSLYAKVFEEMG---ALDKLEAFTSFNGPDFYG---------L-PRNTSKIKLTK--IPWKVPEAFS  324 (346)
Q Consensus       268 g~e~~lp~l~~~~~~~~---~l~~lv~~~s~nPAki~g---------l-~~kdAdlvi~d--~~~~v~~~~~  324 (346)
                      --|..+.++........   .+.++.++...|.|+.+|         | +.+.|||+++|  ..|.++..++
T Consensus       318 ~~em~~a~~~~~~~~~~~~~~~~~~~~~aT~~ga~al~~~l~~~~G~Le~G~~ADlvv~d~~~~~~~~~~~~  389 (441)
T TIGR03314       318 FESLKFANFKHKDAGGDLNAAWPESPAMLFENNNEIAERNFGAKFGRLEPGAKADLIIVDYNAPTPLTADNI  389 (441)
T ss_pred             HHHHHHHHHHhccccCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcccEEEEcCCCCeeechhhc
Confidence            01233333322111111   245777888889998764         2 22389999999  5666654443

Members of this protein family are found exclusively in genomes that contain putative set of labile selenium-dependent enzyme accessory proteins as well as homologs of a labile selenium-dependent purine hydroxylase. A mutant in this gene in Escherichia coli had improved stationary phase viability. The function is unknown.

>cd01312 Met_dep_hydrolase_D Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site

Probab=98.58  E-value=1.9e-05  Score=77.39  Aligned_cols=155  Identities=14%  Similarity=0.176  Sum_probs=87.9

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHH-----------------------HHHHHHH--HhCCCCcEE
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFID-----------------------TILQPLI--QRLPQLKVV  171 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~-----------------------~~l~~~l--a~~~g~~lh  171 (346)
                      +.+.++.+.+++.|.++.+|.....       .|...+.                       +-++ .+  ....+.++.
T Consensus       163 e~l~~~~~lA~~~g~~i~~Hl~E~~-------~e~~~~~~~~g~~~~~~~~~~~~~~~~~g~~pv~-~l~~~g~L~~~~~  234 (381)
T cd01312         163 ELAQDLIDLAKKLNLPLSTHFLESK-------EEREWLEESKGWFKHFWESFLKLPKPKKLATAID-FLDMLGGLGTRVS  234 (381)
T ss_pred             HHHHHHHHHHHHcCCeEEEEecCcH-------HHHHHHHHhccchhhHhhhhcccccccCCCCHHH-HHHHcCCCCCCcE
Confidence            6788899999999999999976431       1111110                       0111 12  224466888


Q ss_pred             EEccC--CHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCC
Q 019093          172 MEHIT--TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDS  249 (346)
Q Consensus       172 i~HvS--t~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDH  249 (346)
                      +.|..  +.+.++++++.   .+.+-.||..      +..   .+..   .+|++         +.+..|.-=. +|||.
T Consensus       235 ~~H~~~l~~~~~~~l~~~---g~~v~~~P~s------n~~---lg~g---~~p~~---------~~~~~Gv~v~-lGtD~  289 (381)
T cd01312         235 FVHCVYANLEEAEILASR---GASIALCPRS------NRL---LNGG---KLDVS---------ELKKAGIPVS-LGTDG  289 (381)
T ss_pred             EEECCcCCHHHHHHHHHc---CCeEEECcch------hhh---hcCC---CcCHH---------HHHHCCCcEE-EeCCC
Confidence            88876  56778888764   4667788941      111   1111   14433         3455575555 89995


Q ss_pred             CCCCccccccCCCCCCccch-hHHHHHHHHHHHh-cCCHHHHHHHHchhhhhhcCCC------CCCccEEEEe
Q 019093          250 APHERGRKECACGCAGIYNA-PVALSLYAKVFEE-MGALDKLEAFTSFNGPDFYGLP------RNTSKIKLTK  314 (346)
Q Consensus       250 aP~~~~~K~~~~~~~G~~g~-e~~lp~l~~~~~~-~~~l~~lv~~~s~nPAki~gl~------~kdAdlvi~d  314 (346)
                      .+-.          ....-+ |..+-........ ..+..++.++.+.|+|+.+|++      .|.|||+++|
T Consensus       290 ~~~~----------~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gA~alg~~~Gsle~Gk~ADlvv~d  352 (381)
T cd01312         290 LSSN----------ISLSLLDELRALLDLHPEEDLLELASELLLMATLGGARALGLNNGEIEAGKRADFAVFE  352 (381)
T ss_pred             CccC----------CCCCHHHHHHHHHHhcccccccCCHHHHHHHHHHHHHHHhCCCCCccCCCCcccEEEEe
Confidence            3210          011111 1111111110000 1356789999999999999973      2389999999

The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.

>PRK06380 metal-dependent hydrolase; Provisional

Probab=98.51  E-value=2.7e-05  Score=76.99  Aligned_cols=161  Identities=12%  Similarity=0.107  Sum_probs=87.7

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChh-hhHHHHHHHHHHH-HHHhCCCCcEEEEccC--CHHHHHHHHccCCCee
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIF-DREKVFIDTILQP-LIQRLPQLKVVMEHIT--TMDAVKFVESCKEGFV  192 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~-~~E~~av~~~l~~-~la~~~g~~lhi~HvS--t~~~l~~i~~akg~~v  192 (346)
                      +.+.++++.+++.|.++.+|+....-  ... ..+..-. +.++- .-....+.++.+.|..  +.+.++++++.   .+
T Consensus       186 e~l~~~~~~A~~~g~~v~~H~~e~~~--~~~~~~~~~g~-~~ie~~~~~g~l~~~~~~~H~~~l~~~d~~~la~~---g~  259 (418)
T PRK06380        186 ETYLKAKEIAEKYDTIMHMHLSETRK--EVYDHVKRTGE-RPVEHLEKIGFLNSKLIAAHCVWATYHEIKLLSKN---GV  259 (418)
T ss_pred             HHHHHHHHHHHHcCCCEEEEeCCcHH--HHHHHHHHhCC-CHHHHHHHCCCCCCCeEEEEeecCCHHHHHHHHHc---CC
Confidence            78999999999999999999976421  000 0000000 00100 1112234565566655  56778888764   46


Q ss_pred             EEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccch-hH
Q 019093          193 AATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNA-PV  271 (346)
Q Consensus       193 t~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~-e~  271 (346)
                      .+-.||...      ..   .+.  .-.||+|         +.+..|.-=. +|||-....          ....-+ +.
T Consensus       260 ~v~~~P~sn------~~---l~~--~g~~p~~---------~~~~~Gv~v~-lGTD~~~~~----------~~~d~~~~~  308 (418)
T PRK06380        260 KVSWNSVSN------FK---LGT--GGSPPIP---------EMLDNGINVT-IGTDSNGSN----------NSLDMFEAM  308 (418)
T ss_pred             EEEECHHHH------Hh---hcc--CCCCcHH---------HHHHCCCeEE-EcCCCCcCC----------CCcCHHHHH
Confidence            778889631      11   011  0123433         4455564444 899952110          000111 12


Q ss_pred             HHHHHHHHHHh----cCCHHHHHHHHchhhhhhcCCCC------CCccEEEEe
Q 019093          272 ALSLYAKVFEE----MGALDKLEAFTSFNGPDFYGLPR------NTSKIKLTK  314 (346)
Q Consensus       272 ~lp~l~~~~~~----~~~l~~lv~~~s~nPAki~gl~~------kdAdlvi~d  314 (346)
                      .+.+++.....    ..+..++.++.+.|+||.+|+..      |.|||+++|
T Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gA~~lg~~~G~l~~G~~ADlvv~d  361 (418)
T PRK06380        309 KFSALSVKNERWDASIIKAQEILDFATINAAKALELNAGSIEVGKLADLVILD  361 (418)
T ss_pred             HHHHHHhhhccCCCCcCCHHHHHHHHHHHHHHHhCCCCCccCCCccCCEEEEe
Confidence            22222111111    13678999999999999999732      389999999

>PRK09229 N-formimino-L-glutamate deiminase; Validated

Probab=98.44  E-value=8.2e-05  Score=74.54  Aligned_cols=156  Identities=14%  Similarity=0.064  Sum_probs=86.1

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHh--CCCCcEEEEccC--CHHHHHHHHccCCCee
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQR--LPQLKVVMEHIT--TMDAVKFVESCKEGFV  192 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~--~~g~~lhi~HvS--t~~~l~~i~~akg~~v  192 (346)
                      +.+.++++.+ +.|.++.+|+.+...  ....+....-.+.++ .+++  ..+.++.+.|..  +.+.++++++.   .+
T Consensus       216 e~l~~~~~~A-~~g~~i~~H~~e~~~--e~~~~~~~~g~~~~~-~l~~~g~l~~~~~l~H~~~l~~~d~~~la~~---g~  288 (456)
T PRK09229        216 DQLAAVLALA-APDGPVHIHIAEQTK--EVDDCLAWSGARPVE-WLLDHAPVDARWCLVHATHLTDAETARLARS---GA  288 (456)
T ss_pred             HHHHHHHHHh-cCCCceEEEeCCCHH--HHHHHHHHcCCCHHH-HHHHcCCCCCCeEEEeeccCCHHHHHHHHHc---CC
Confidence            7899999999 999999999953211  000000000000111 1222  345676677766  66778888764   46


Q ss_pred             EEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHH
Q 019093          193 AATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVA  272 (346)
Q Consensus       193 t~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~  272 (346)
                      ++-.||..      ...   .+.   -.+|+|         +.+..|.-=. +|||..+ +            ..-++.+
T Consensus       289 ~v~~~P~s------n~~---lg~---g~~p~~---------~l~~~Gv~v~-lGtD~~~-~------------~d~~~~~  333 (456)
T PRK09229        289 VAGLCPTT------EAN---LGD---GIFPAV---------DYLAAGGRFG-IGSDSHV-S------------IDLVEEL  333 (456)
T ss_pred             eEEECchh------hhh---hcC---CCCCHH---------HHHHCCCeEE-EecCCCC-C------------CCHHHHH
Confidence            67789952      111   111   124443         3345565445 8999522 1            0111111


Q ss_pred             HHH-HH-HHHH----------hcCCHHHHHHHHchhhhhhcCC------CCCCccEEEEe
Q 019093          273 LSL-YA-KVFE----------EMGALDKLEAFTSFNGPDFYGL------PRNTSKIKLTK  314 (346)
Q Consensus       273 lp~-l~-~~~~----------~~~~l~~lv~~~s~nPAki~gl------~~kdAdlvi~d  314 (346)
                      -.+ +. ....          .+.+..++.++.+.|+|+.+|+      +.|.|||+|+|
T Consensus       334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gA~alg~~~GsLe~Gk~ADlvvld  393 (456)
T PRK09229        334 RLLEYGQRLRDRRRNVLAAAAQPSVGRRLFDAALAGGAQALGRAIGGLAVGARADLVVLD  393 (456)
T ss_pred             HHHHHHHHHhhcCCcccccccccchHHHHHHHHHHHHHHHhCCCcCCcCCCCccCEEEEe
Confidence            111 11 1100          1235678999999999999996      22489999999

>PRK06038 N-ethylammeline chlorohydrolase; Provisional

Probab=98.42  E-value=1.8e-05  Score=78.72  Aligned_cols=154  Identities=11%  Similarity=0.108  Sum_probs=87.5

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHH-----HHHHHHH--hCCCCcEEEEccC--CHHHHHHHHcc
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDT-----ILQPLIQ--RLPQLKVVMEHIT--TMDAVKFVESC  187 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~-----~l~~~la--~~~g~~lhi~HvS--t~~~l~~i~~a  187 (346)
                      +.+.++++.+++.|.++.+|+....-       |..++..     .++ .+.  ...+.++.+.|..  +.+.++++++.
T Consensus       190 e~l~~~~~~A~~~g~~v~~H~~e~~~-------~~~~~~~~~G~~~i~-~l~~~g~l~~r~~~~H~~~l~~~~~~~la~~  261 (430)
T PRK06038        190 EFLSKVKKLANKDGVGIHIHVLETEA-------ELNQMKEQYGMCSVN-YLDDIGFLGPDVLAAHCVWLSDGDIEILRER  261 (430)
T ss_pred             HHHHHHHHHHHHcCCcEEEEcCCCHH-------HHHHHHHHhCCCHHH-HHHHcCCCCCCeEEEEEecCCHHHHHHHHhc
Confidence            78899999999999999999986531       1111111     110 111  2245565555554  45667887764


Q ss_pred             CCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCcc
Q 019093          188 KEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIY  267 (346)
Q Consensus       188 kg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~  267 (346)
                         .+..-.||..-.      .. +  .   -.+|+|         +.++.|.-=. +|||..+..           +..
T Consensus       262 ---g~~v~~~P~~n~------~~-~--~---~~~p~~---------~~~~~Gv~v~-lGtD~~~~~-----------~~~  305 (430)
T PRK06038        262 ---GVNVSHNPVSNM------KL-A--S---GIAPVP---------KLLERGVNVS-LGTDGCASN-----------NNL  305 (430)
T ss_pred             ---CCEEEEChHHhh------hh-c--c---CCCCHH---------HHHHCCCeEE-EeCCCCccC-----------CCc
Confidence               355567885321      11 1  0   113433         3445565555 899953210           111


Q ss_pred             c-h-hHHHHHHHHHHH----hcCCHHHHHHHHchhhhhhcCCCC------CCccEEEEe
Q 019093          268 N-A-PVALSLYAKVFE----EMGALDKLEAFTSFNGPDFYGLPR------NTSKIKLTK  314 (346)
Q Consensus       268 g-~-e~~lp~l~~~~~----~~~~l~~lv~~~s~nPAki~gl~~------kdAdlvi~d  314 (346)
                      . + +..+..+.....    ...++++++++.+.|||+.+|++.      +.|||+++|
T Consensus       306 d~~~~~~~a~~~~~~~~~~~~~~~~~~al~~aT~~gA~~lg~~~G~l~~G~~ADlvvld  364 (430)
T PRK06038        306 DMFEEMKTAALLHKVNTMDPTALPARQVLEMATVNGAKALGINTGMLKEGYLADIIIVD  364 (430)
T ss_pred             CHHHHHHHHHHHhhhccCCCCcCCHHHHHHHHhHHHHHHhCCCCCccCCCcccCEEEEe
Confidence            1 1 222222222111    124788999999999999999743      289999999

>PRK08418 chlorohydrolase; Provisional

Probab=98.40  E-value=6.4e-05  Score=74.31  Aligned_cols=153  Identities=14%  Similarity=0.149  Sum_probs=88.5

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHH---------------------HHHHHHHHhCCCCcEEEEcc
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFID---------------------TILQPLIQRLPQLKVVMEHI  175 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~---------------------~~l~~~la~~~g~~lhi~Hv  175 (346)
                      +.+.++.+.+++.|.++.+|.....       .|.+.+.                     +.++ .+...-+.++.+.|.
T Consensus       190 e~l~~~~~~A~~~~~~i~~H~~E~~-------~E~~~~~~~~G~~~~~~~~~~~~~~~~~~pv~-~l~~~g~~~~~~~H~  261 (408)
T PRK08418        190 ILAKKALQLAKKENLLVSTHFLESK-------AEREWLEESKGWFKKFFEKFLKEPKPLYTPKE-FLELFKGLRTLFTHC  261 (408)
T ss_pred             HHHHHHHHHHHHcCCeEEEEecCCH-------HHHHHHHhccCchhhhhhhhcccccccCCHHH-HHHHhCCCCeEEEec
Confidence            7889999999999999999987532       1111110                     1121 223332467888887


Q ss_pred             C--CHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCC
Q 019093          176 T--TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHE  253 (346)
Q Consensus       176 S--t~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~  253 (346)
                      .  +.+.++++++.   .+++-.||-      +...- +  ..   .||++         +.+..|.-=. +|||-.+-.
T Consensus       262 ~~~~~~di~~la~~---g~~v~~cP~------sn~~l-g--~g---~~p~~---------~~~~~Gi~v~-lGtD~~~~~  316 (408)
T PRK08418        262 VYASEEELEKIKSK---NASITHCPF------SNRLL-S--NK---ALDLE---------KAKKAGINYS-IATDGLSSN  316 (408)
T ss_pred             ccCCHHHHHHHHHc---CCcEEECHh------HHHHh-c--CC---CccHH---------HHHhCCCeEE-EeCCCCCCC
Confidence            7  78889999875   345566882      22211 1  11   24444         3445565445 899932210


Q ss_pred             ccccccCCCCCCccch-hHHHHHHHHHHHhc---CCHHHHHHHHchhhhhhcCCCC------CCccEEEEe
Q 019093          254 RGRKECACGCAGIYNA-PVALSLYAKVFEEM---GALDKLEAFTSFNGPDFYGLPR------NTSKIKLTK  314 (346)
Q Consensus       254 ~~~K~~~~~~~G~~g~-e~~lp~l~~~~~~~---~~l~~lv~~~s~nPAki~gl~~------kdAdlvi~d  314 (346)
                                ....-+ |..+-++..  ...   .+.+++.++.+.|+|+.+|++.      |.|||+++|
T Consensus       317 ----------~~~~~~~em~~~~~~~--~~~~~~~~~~~~l~~aT~~gA~alg~~~G~l~~G~~ADlv~~d  375 (408)
T PRK08418        317 ----------ISLSLLDELRAALLTH--ANMPLLELAKILLLSATRYGAKALGLNNGEIKEGKDADLSVFE  375 (408)
T ss_pred             ----------CCcCHHHHHHHHHHHh--ccCCccccHHHHHHHHHHHHHHHhCCCCccccCCCccCEEEEe
Confidence                      011111 222211111  111   1257899999999999999742      379999999

>TIGR02022 hutF formiminoglutamate deiminase

Probab=98.40  E-value=7.5e-05  Score=74.85  Aligned_cols=151  Identities=16%  Similarity=0.124  Sum_probs=86.8

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHH-----HHHHHHHh--CCCCcEEEEccC--CHHHHHHHHcc
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDT-----ILQPLIQR--LPQLKVVMEHIT--TMDAVKFVESC  187 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~-----~l~~~la~--~~g~~lhi~HvS--t~~~l~~i~~a  187 (346)
                      +.+.++++ +++.|+++.+|+....       .|...+.+     -++ .+.+  ..+.++.+.|..  +.+.++++++.
T Consensus       216 e~l~~~~~-a~~~g~~v~~H~~e~~-------~e~~~~~~~~G~~~v~-~l~~~g~l~~~~~~~H~~~l~~~d~~~la~~  286 (455)
T TIGR02022       216 EQLAAVLQ-ASDRQAPVHIHVAEQQ-------KEVDDCLAWSGRRPVE-WLLDHGPVDARWCLVHATHLTDEETALLARS  286 (455)
T ss_pred             HHHHHHHH-HHhCCCceEEEECCCh-------HHHHHHHHHhCCCHHH-HHHHcCCCCCCEEEEEeecCCHHHHHHHHHc
Confidence            67888888 7899999999995321       11111111     111 2232  356677777766  57788888874


Q ss_pred             CCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCcc
Q 019093          188 KEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIY  267 (346)
Q Consensus       188 kg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~  267 (346)
                         .+++-.||..      +..   .+.   --||++         +.+..|.-=. +|||..+ +            ..
T Consensus       287 ---g~~v~~~P~s------n~~---lg~---g~~pi~---------~l~~~Gv~v~-lGTD~~~-~------------~d  328 (455)
T TIGR02022       287 ---GAVAGLCPTT------EAN---LGD---GIFPAV---------DFVAAGGRFG-IGSDSHV-V------------ID  328 (455)
T ss_pred             ---CCeEEEChhh------hcc---ccC---CCCCHH---------HHHHCCCeEE-EECCCCC-C------------CC
Confidence               4677889953      111   111   125543         3455575555 8999522 1            11


Q ss_pred             ch-hHHHHHHHHHHHh-----------cCCHHHHHHHHchhhhhhcCCC------CCCccEEEEe
Q 019093          268 NA-PVALSLYAKVFEE-----------MGALDKLEAFTSFNGPDFYGLP------RNTSKIKLTK  314 (346)
Q Consensus       268 g~-e~~lp~l~~~~~~-----------~~~l~~lv~~~s~nPAki~gl~------~kdAdlvi~d  314 (346)
                      -+ |..+-.+......           ..+.+++.++.+.|+||.+|++      .|.|||+|+|
T Consensus       329 ~~~~m~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gAralg~~~GsLe~Gk~ADlvvld  393 (455)
T TIGR02022       329 VAEELRQLEYGQRLRDRARNVLAAGPGPSVGRALYDAALLGGAQALGLATGGLRAGARADFLTLD  393 (455)
T ss_pred             HHHHHHHHHHHHHHHhcccccccCCcccchHHHHHHHHHHHHHHHhCCCCCccCCCCCcCEEEEe
Confidence            11 2222222111111           1235688999999999999973      2389999999

In some species, histidine utilization goes via urocanate to glutamate in four step, the last being removal of formamide. This model describes an alternate fourth step, formiminoglutamate hydrolase, which leads to N-formyl-L-glutamate. This product may be acted on by formylglutamate amidohydrolase (TIGR02017) and bypass glutamate as a product during its degradation. Alternatively, removal of formate (by EC 3.5.1.68) would yield glutamate.

>PF04909 Amidohydro_2: Amidohydrolase; InterPro: IPR006992 These proteins are related to the metal-dependent hydrolase superfamily []

Probab=98.29  E-value=1.4e-05  Score=73.37  Aligned_cols=192  Identities=19%  Similarity=0.269  Sum_probs=107.3

Q ss_pred             cEEEEEEEEeCCCC---CHHHHHHHH-HcCCeeEEEEeecCCccCCCCCccChHHHHH-HHHHHhHHcCCcEEEecCCCC
Q 019093           67 NFTPLMTLYLTDTT---SPDEIKLAR-KTGVVFAVKLYPAGATTNSQDGVTDLFGKCV-HVLEEMVEQNMPLLVHGEVTD  141 (346)
Q Consensus        67 d~~~~~~~~~~~~~---~~~el~~l~-~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~-~~l~~~~~~g~~v~vHaE~~~  141 (346)
                      .+...+++  .+..   ..+++.+.. +.| +.|+|+++..    .+....+  ..++ ++++.++++|++|.+|+....
T Consensus        71 ~~~~~~~~--~~~~~~~~~~~l~~~~~~~g-~~Gv~l~~~~----~~~~~~~--~~~~~~~~~~~~~~~~pv~~H~g~~~  141 (273)
T PF04909_consen   71 RFIGFAAI--PPPDPEDAVEELERALQELG-FRGVKLHPDL----GGFDPDD--PRLDDPIFEAAEELGLPVLIHTGMTG  141 (273)
T ss_dssp             TEEEEEEE--TTTSHHHHHHHHHHHHHTTT-ESEEEEESSE----TTCCTTS--GHCHHHHHHHHHHHT-EEEEEESHTH
T ss_pred             CEEEEEEe--cCCCchhHHHHHHHhccccc-eeeeEecCCC----Ccccccc--HHHHHHHHHHHHhhccceeeeccccc
Confidence            45555454  3322   234666666 456 8999999742    1222334  3455 999999999999999977100


Q ss_pred             CCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCH-----HHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCc
Q 019093          142 PIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTM-----DAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPH  216 (346)
Q Consensus       142 ~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~-----~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~  216 (346)
                      .  ............ +...+.+++++|+.+.|+...     +.++++++.  -+++++++.-+-.              
T Consensus       142 ~--~~~~~~~~~~~~-~~~~~~~~P~l~ii~~H~G~~~~~~~~~~~l~~~~--~nvy~d~s~~~~~--------------  202 (273)
T PF04909_consen  142 F--PDAPSDPADPEE-LEELLERFPDLRIILAHLGGPFPWWEEALRLLDRF--PNVYVDLSGIPPF--------------  202 (273)
T ss_dssp             H--HHHHHHHHHHHH-HTTHHHHSTTSEEEESGGGTTHHHHHHHHHHHHHH--TTEEEECHSHHSS--------------
T ss_pred             h--hhhhHHHHHHHH-HHHHHHHhcCCeEEEecCcccchhHHHHHHHHHhC--Ccccccccccccc--------------
Confidence            0  001111111211 222578999999999999998     666666655  3688887652111              


Q ss_pred             eEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHH-HHHhcCCHHHHHHHHch
Q 019093          217 NYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAK-VFEEMGALDKLEAFTSF  295 (346)
Q Consensus       217 ~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~-~~~~~~~l~~lv~~~s~  295 (346)
                      ....++......-..+.+..-.+.| + .|||. |+....+.              ...++. ......+-+..-++++.
T Consensus       203 ~~~~~~~~~~~~l~~~~~~~g~dri-l-fGSD~-P~~~~~~~--------------~~~~~~~~~~~~l~~~~~~~i~~~  265 (273)
T PF04909_consen  203 WYFWPPSFDRPFLRRAVDEFGPDRI-L-FGSDY-PHPDGASP--------------YEYIWEAYFLDDLSEEEREKILYD  265 (273)
T ss_dssp             EEEETTHHCHHHHHHHHHHHTGGGE-E-EE--T-TSSTHHHH--------------HHHHHHHHHHHHSSHHHHHHHHTH
T ss_pred             cccCcccccHHHHHHHHHHhCCceE-E-ecCCC-CCCCcccc--------------HHHHHHhhhccCCCHHHHHHHHhH
Confidence            2223333333333344444433344 4 79995 76533211              111111 11111577888999999


Q ss_pred             hhhhhcCC
Q 019093          296 NGPDFYGL  303 (346)
Q Consensus       296 nPAki~gl  303 (346)
                      |++|+|||
T Consensus       266 NA~rl~~l  273 (273)
T PF04909_consen  266 NARRLYGL  273 (273)
T ss_dssp             HHHHHHTC
T ss_pred             hHHHHcCc
Confidence            99999997

The family includes 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase which converts alpha-amino-beta-carboxymuconate-epsilon- semialdehyde (ACMS) to alpha-aminomuconate semialdehyde (AMS). ACMS can be converted non-enzymatically to quinolate, a potent endogenous excitoxin of neuronal cells which is implicated in the pathogenesis of various neurodegenerative disorders. In the presence of AMCSD, ACMS is converted to AMS, a benign catabolite. 2-amino-3-(3-oxoprop-2-enyl)-but-2-enedioate = 2-aminomuconate semialdehyde + CO2. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2QPX_A 4D8L_A 3K4W_I 3IRS_B 4DZI_B 3S4T_G 2GWG_B 3IJ6_A 2DVX_C 2DVT_C ....

>COG1001 AdeC Adenine deaminase [Nucleotide transport and metabolism]

Probab=98.26  E-value=1.1e-05  Score=81.01  Aligned_cols=252  Identities=14%  Similarity=0.127  Sum_probs=132.4

Q ss_pred             eEEecCccccceecCCCccccccccccC--CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEE-----
Q 019093            2 ELTLTQPDDWHLHLRDGDLLKAVVPHSV--SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTL-----   74 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~g~~~ke~~~s~s--GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~-----   74 (346)
                      +|+.||+||.|+|+..+...-..|....  -|+||+|.=|...--....+.++...+.+++ ..  .++.++..-     
T Consensus        73 ~yivPGfID~H~HIESSm~tP~~FA~~Vlp~GtTtvV~DPHEIaNV~G~~Gi~~ml~~a~~-~p--l~~~~~~pScVPat  149 (584)
T COG1001          73 RYIVPGFIDAHLHIESSMLTPSEFARAVLPHGTTTVVSDPHEIANVLGEDGIRFMLDEAKE-TP--LKVYVMLPSCVPAT  149 (584)
T ss_pred             CEeccceeecceeccccccCHHHHHHHhhccCceEEeeCcHHHHhhccHHHHHHHHHHHhh-CC--eEEEEecccCccCC
Confidence            5899999999999865333334555443  8999998877443333445666666665544 23  566553210     


Q ss_pred             -EeCCC--CCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHH
Q 019093           75 -YLTDT--TSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREK  151 (346)
Q Consensus        75 -~~~~~--~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~  151 (346)
                       +-+.+  ...+++.++.+.--|.++-=+|.+    .+. +..+ ..+..-++.+++.|++|-=||---+-      .| 
T Consensus       150 ~~Et~Ga~l~a~~i~e~~~~p~Vigl~E~Mn~----pgV-i~~D-~~~l~kl~a~~~~~k~VdGHapgl~g------~~-  216 (584)
T COG1001         150 PFETSGAELTAEDIKELLEHPEVIGLGEMMNF----PGV-IEGD-PDMLAKLEAARKAGKPVDGHAPGLSG------KE-  216 (584)
T ss_pred             ccccCCceecHHHHHHHhhCCCccchhhhcCC----chh-ccCC-HHHHHHHHHHHHcCCeecccCCCCCh------HH-
Confidence             00111  124567777664335444333432    111 2223 67888899999999999889864321      11 


Q ss_pred             HHHHHHHHHHHHhCCCCcEEEEccC--CHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhH
Q 019093          152 VFIDTILQPLIQRLPQLKVVMEHIT--TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHR  229 (346)
Q Consensus       152 ~av~~~l~~~la~~~g~~lhi~HvS--t~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~  229 (346)
                        +..    +++.  |..  =.|=+  -.|+++.+|.  |..+.         +      +.  |+.         ..|-
T Consensus       217 --Ln~----Y~aa--Gi~--tDHE~~t~EEa~~klr~--Gm~i~---------i------Re--GS~---------a~dl  258 (584)
T COG1001         217 --LNA----YIAA--GIS--TDHESTTAEEALEKLRL--GMKIM---------I------RE--GSA---------AKDL  258 (584)
T ss_pred             --HHH----HHhc--CCC--cCcccCCHHHHHHHHhC--CcEEE---------E------Ec--Cch---------hhhH
Confidence              111    1221  222  34433  2334443332  33221         1      11  111         2455


Q ss_pred             HHHHHHHHcCCc-cEEeecCCCCCCccccccCCCCCCccchhHHHHHHH-HHHHhcCCHHHHHHHHchhhhhhcCCC-CC
Q 019093          230 QAVVSAVTSGSR-KFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYA-KVFEEMGALDKLEAFTSFNGPDFYGLP-RN  306 (346)
Q Consensus       230 ~aL~~al~~G~I-d~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~-~~~~~~~~l~~lv~~~s~nPAki~gl~-~k  306 (346)
                      .+|..++.+--+ .+++.||-..-. +     +-.-|      .+--+. .........-..+++.|-|||+.|||+ .+
T Consensus       259 ~~l~~~i~e~~~~~~~lcTDD~~p~-d-----l~~eG------hld~~vR~Ai~~Gv~p~~a~qmAtiN~A~~~gl~~~G  326 (584)
T COG1001         259 AALLPAITELGSRRVMLCTDDRHPD-D-----LLEEG------HLDRLVRRAIEEGVDPLDAYQMATINPAEHYGLDDLG  326 (584)
T ss_pred             HHHHHHHhhcCCceEEEECCCCChh-H-----hhhcC------CHHHHHHHHHHcCCCHHHHHHHHhcCHHHHcCCcccc
Confidence            566666654332 122344442211 0     00012      122222 233333467788999999999999996 33


Q ss_pred             ------CccEEEEe--cceee
Q 019093          307 ------TSKIKLTK--IPWKV  319 (346)
Q Consensus       307 ------dAdlvi~d--~~~~v  319 (346)
                            .|||++++  +.+++
T Consensus       327 ~iAPG~~ADlvi~~DL~~~~v  347 (584)
T COG1001         327 LIAPGRRADLVILEDLRNFKV  347 (584)
T ss_pred             cccCCccccEEEEcccccCce
Confidence                  79999996  55444

>TIGR00010 hydrolase, TatD family

Probab=98.25  E-value=3.4e-05  Score=70.50  Aligned_cols=143  Identities=16%  Similarity=0.185  Sum_probs=71.4

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccCCCeeEEEc
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATV  196 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~akg~~vt~Et  196 (346)
                      ..+.+.++.+++.|+||.+|+....             ..+++ .+.++...+..|.|.-+ .+.+.+++.....++.++
T Consensus       108 ~~~~~~~~~a~~~~~pv~iH~~~~~-------------~~~~~-~l~~~~~~~~~i~H~~~-~~~~~~~~~~~~g~~~~~  172 (252)
T TIGR00010       108 EVFRAQLQLAEELNLPVIIHARDAE-------------EDVLD-ILREEKPKVGGVLHCFT-GDAELAKKLLDLGFYISI  172 (252)
T ss_pred             HHHHHHHHHHHHhCCCeEEEecCcc-------------HHHHH-HHHhcCCCCCEEEEccC-CCHHHHHHHHHCCCeEee
Confidence            5677789999999999999998532             11221 23333222344557643 222333332213455565


Q ss_pred             cchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHH
Q 019093          197 TPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLY  276 (346)
Q Consensus       197 ~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l  276 (346)
                      +....+                     ++.+.-..+++.+-.+  .++++||- |+......     .|-..-...++-+
T Consensus       173 ~~~~~~---------------------~~~~~~~~~i~~~~~d--ril~~TD~-p~~~~~~~-----~~~~~~p~~i~~~  223 (252)
T TIGR00010       173 SGIVTF---------------------KNAKSLREVVRKIPLE--RLLVETDS-PYLAPVPY-----RGKRNEPAFVRYT  223 (252)
T ss_pred             ceeEec---------------------CCcHHHHHHHHhCCHH--HeEecccC-CCCCCCCC-----CCCCCCChhHHHH
Confidence            541100                     1112222333433212  23479996 54211000     1111112234432


Q ss_pred             HH-HH-HhcCCHHHHHHHHchhhhhhcCC
Q 019093          277 AK-VF-EEMGALDKLEAFTSFNGPDFYGL  303 (346)
Q Consensus       277 ~~-~~-~~~~~l~~lv~~~s~nPAki~gl  303 (346)
                      .. .. ....+.+++.++++.||+|+|||
T Consensus       224 ~~~~a~~~g~~~~~~~~~~~~N~~~~~~~  252 (252)
T TIGR00010       224 VEAIAEIKGMDVEELAQITTKNAKRLFGL  252 (252)
T ss_pred             HHHHHHHhCcCHHHHHHHHHHHHHHHhCc
Confidence            22 11 12347899999999999999986

Several genomes have multiple paralogs related to this family. However, a set of 17 proteins can be found, one each from 17 of the first 20 genomes, such that each member forms a bidirectional best hit across genomes with all other members of the set. This core set (and one other near-perfect member), but not the other paralogs, form the seed for this model. Additionally, members of the seed alignment and all trusted hits, but not all paralogs, have a conserved motif DxHxH near the amino end. The member from E. coli was recently shown to have DNase activity.

>cd01311 PDC_hydrolase 2-pyrone-4,6-dicarboxylic acid (PDC) hydrolase hydrolyzes PDC to yield 4-oxalomesaconic acid (OMA) or its tautomer, 4-carboxy-2-hydroxymuconic acid (CHM)

Probab=98.25  E-value=0.00037  Score=64.61  Aligned_cols=97  Identities=21%  Similarity=0.253  Sum_probs=65.4

Q ss_pred             CHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHH
Q 019093           81 SPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQP  160 (346)
Q Consensus        81 ~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~  160 (346)
                      ..+++.++.+.| +.|+|+.+..    .+.  .++ ..+.++++.++++|.++.+|+....+            ..+. .
T Consensus        82 ~~~~l~~~~~~g-~rGvRl~~~~----~~~--~~~-~~~~~~~~~~~~~gl~v~~~~~~~~l------------~~l~-~  140 (263)
T cd01311          82 TDAELKEMHDAG-VRGVRFNFLF----GGV--DNK-DELDEIAKRAAELGWHVQVYFDAVDL------------PALL-P  140 (263)
T ss_pred             CHHHHHHHHHCC-CeEEEEeccc----CCC--CCH-HHHHHHHHHHHHcCCEEEEEeCHhhH------------HHHH-H
Confidence            356888887788 8999987531    111  244 77899999999999999999976432            1122 1


Q ss_pred             HHHhCCCCcEEEEccCCHH--------HH-HHHHccCCCeeEEEccch
Q 019093          161 LIQRLPQLKVVMEHITTMD--------AV-KFVESCKEGFVAATVTPQ  199 (346)
Q Consensus       161 ~la~~~g~~lhi~HvSt~~--------~l-~~i~~akg~~vt~Et~ph  199 (346)
                      .++++ ++++.+.|+..+.        .. +.++.++.-+|++.++--
T Consensus       141 l~~~~-~l~ivldH~G~p~~~~~~~~~~~~~~l~~l~~pNV~~k~Sg~  187 (263)
T cd01311         141 FLQKL-PVAVVIDHFGRPDVTKGVDGAEFAALLKLIEEGNVWVKVSGP  187 (263)
T ss_pred             HHHHC-CCCEEEECCCCCCCCCCCCCHhHHHHHHHHhcCCEEEEecch
Confidence            35666 9999999998532        22 223322335788888763

This reaction is part of the protocatechuate (PCA) 4,5-cleavage pathway. PCA is one of the most important intermediate metabolites in the bacterial pathways for various phenolic compounds, including lignin, which is the most abundant aromatic material in nature.

>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]

Probab=98.19  E-value=0.00014  Score=68.68  Aligned_cols=184  Identities=16%  Similarity=0.193  Sum_probs=107.4

Q ss_pred             cEEEEEEEEeCCCC---CHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCC
Q 019093           67 NFTPLMTLYLTDTT---SPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPI  143 (346)
Q Consensus        67 d~~~~~~~~~~~~~---~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~  143 (346)
                      +|...+.+  .+..   ...|+++.++.++++++|+.+...    +.. .++ ..++.+|+.++++|+|+.+|.......
T Consensus        99 rf~~~~~v--~p~~~~~a~~E~er~v~~~gf~g~~l~p~~~----~~~-~~~-~~~~pi~~~a~~~gvpv~ihtG~~~~~  170 (293)
T COG2159          99 RFVGFARV--DPRDPEAAAEELERRVRELGFVGVKLHPVAQ----GFY-PDD-PRLYPIYEAAEELGVPVVIHTGAGPGG  170 (293)
T ss_pred             ceeeeeee--CCCchHHHHHHHHHHHHhcCceEEEeccccc----CCC-CCC-hHHHHHHHHHHHcCCCEEEEeCCCCCC
Confidence            55554444  4432   345888888754489999976431    111 233 678999999999999999999976532


Q ss_pred             CChhhhHHHHHHHHHHHHHHhCCCCcEEEEccC-----CHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceE
Q 019093          144 VDIFDREKVFIDTILQPLIQRLPQLKVVMEHIT-----TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNY  218 (346)
Q Consensus       144 ~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvS-----t~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k  218 (346)
                      .+....  .+.-..+...+.++++.|+.+.|++     ..+++++.+.  .-+++.|++-                ...+
T Consensus       171 ~~~~~~--~~~p~~~~~va~~fP~l~IVl~H~G~~~p~~~~a~~~a~~--~~nvy~d~s~----------------~~~~  230 (293)
T COG2159         171 AGLEKG--HSDPLYLDDVARKFPELKIVLGHMGEDYPWELEAIELAYA--HPNVYLDTSG----------------VRPK  230 (293)
T ss_pred             cccccC--CCCchHHHHHHHHCCCCcEEEEecCCCCchhHHHHHHHHh--CCCceeeeec----------------cccc
Confidence            111110  0011123324678899999999998     3444444433  2466666643                1222


Q ss_pred             EeCCCCChhhHHHHHHHHHc-CCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHchhh
Q 019093          219 CLPVLKREIHRQAVVSAVTS-GSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNG  297 (346)
Q Consensus       219 ~~PPLR~~~d~~aL~~al~~-G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~~~~l~~lv~~~s~nP  297 (346)
                      +-+|        .+|+-+.+ |.=-++.||| .|+...++.              +-   .......+-+...+++..|+
T Consensus       231 ~~~~--------~~~~~~~~~~~dkilFGSD-~P~~~~~~~--------------l~---~~~~l~l~~e~k~kiL~~NA  284 (293)
T COG2159         231 YFAP--------PLLEFLKELGPDKILFGSD-YPAIHPEVW--------------LA---ELDELGLSEEVKEKILGENA  284 (293)
T ss_pred             cCCh--------HHHHHHHhcccCeEEecCC-CCCcCHHHH--------------HH---HHHhcCCCHHHHHHHHHHhH
Confidence            3333        34444443 3334446999 576433321              11   11111234467788899999


Q ss_pred             hhhcCCC
Q 019093          298 PDFYGLP  304 (346)
Q Consensus       298 Aki~gl~  304 (346)
                      +|+|||.
T Consensus       285 ~rll~l~  291 (293)
T COG2159         285 ARLLGLD  291 (293)
T ss_pred             HHHhCcC
Confidence            9999994

>COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]

Probab=98.17  E-value=0.00012  Score=74.35  Aligned_cols=193  Identities=16%  Similarity=0.111  Sum_probs=123.3

Q ss_pred             ccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHH---HHHHHh--CCCCcEEEEccC--CHHHHHHH
Q 019093          112 VTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTIL---QPLIQR--LPQLKVVMEHIT--TMDAVKFV  184 (346)
Q Consensus       112 ~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l---~~~la~--~~g~~lhi~HvS--t~~~l~~i  184 (346)
                      +.+. ++|.++.+.+.+.|.++.+||=-..           |+..+|   +....+  ..+.+-.|.|++  +++.++.+
T Consensus       317 l~~~-e~l~~~v~~a~~~gl~v~vHAiGD~-----------Av~~~LdafE~~~~~~~~~~~r~rieH~~~v~~~~i~R~  384 (535)
T COG1574         317 LLTE-EELEELVRAADERGLPVAVHAIGDG-----------AVDAALDAFEKARKKNGLKGLRHRIEHAELVSPDQIERF  384 (535)
T ss_pred             ccCH-HHHHHHHHHHHHCCCcEEEEEechH-----------HHHHHHHHHHHHhhhcCCccCCceeeeeeecCHhHHHHH
Confidence            4444 8899999999999999999997432           232232   111111  237888899998  56666666


Q ss_pred             HccCCCeeEEEccchhhccchhhhcc-CCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCC
Q 019093          185 ESCKEGFVAATVTPQHLVLNRNALFQ-GGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGC  263 (346)
Q Consensus       185 ~~akg~~vt~Et~ph~L~l~~~~~~~-~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~  263 (346)
                      ++   +.|.+.+-|+|++...+.+.. .| ..+.+-++|+|+         .++.|..=. .|||- |-+..+   +|  
T Consensus       385 ~~---Lgv~~svQP~f~~~~~~~~~~rlG-~~r~~~~~p~~~---------ll~~G~~la-~gSD~-Pv~~~d---P~--  444 (535)
T COG1574         385 AK---LGVIASVQPNFLFSDGEWYVDRLG-EERASRSYPFRS---------LLKAGVPLA-GGSDA-PVEPYD---PW--  444 (535)
T ss_pred             Hh---cCceEeeccccccccchHHHHhhh-hhhhhccCcHHH---------HHHCCCeEe-ccCCC-CCCCCC---hH--
Confidence            54   678999999999876443332 22 245666777663         356688888 79996 442211   11  


Q ss_pred             CCccchhHHHHHH-HHH----HHhcCCHHHHHHHHchhhhhhcCCC-C-------CCccEEEEe-cceeecCCccc-cCC
Q 019093          264 AGIYNAPVALSLY-AKV----FEEMGALDKLEAFTSFNGPDFYGLP-R-------NTSKIKLTK-IPWKVPEAFSF-SFG  328 (346)
Q Consensus       264 ~G~~g~e~~lp~l-~~~----~~~~~~l~~lv~~~s~nPAki~gl~-~-------kdAdlvi~d-~~~~v~~~~~~-s~~  328 (346)
                         .|++.++--- ...    -..++++++..++.+.|+|...|.. .       |.|||+|+| ..|+++.+.+. .++
T Consensus       445 ---~~i~~AVtr~~~~g~~~~~~~~L~~~eAL~~yT~~~A~a~~~e~~~G~Le~G~~AD~~Vld~d~f~~~~~~i~~~~v  521 (535)
T COG1574         445 ---LGIYAAVTRKTPGGRVLGPEERLTREEALRAYTEGGAYASGAEGEKGSLEPGKLADFAVLDRDPFTVDPDSIKDTKV  521 (535)
T ss_pred             ---HHHHHHHcCCCCCCCCCccccccCHHHHHHHHhhhhHHhhhccccccccccCceeeEEEecCCcccCChHHhccceE
Confidence               1111111100 000    0115688899999999999988872 2       279999999 78999887664 366


Q ss_pred             cccccCCCcEEE
Q 019093          329 DIIPMFAGNTLE  340 (346)
Q Consensus       329 ~~sp~~~G~~l~  340 (346)
                      .-|.+ +|+.+.
T Consensus       522 ~~T~~-~Gk~VY  532 (535)
T COG1574         522 VLTIV-AGKVVY  532 (535)
T ss_pred             EEEEE-cCeEee
Confidence            67777 576543

>cd01305 archeal_chlorohydrolases Predicted chlorohydrolases

Probab=98.13  E-value=0.00025  Score=65.65  Aligned_cols=136  Identities=19%  Similarity=0.234  Sum_probs=73.4

Q ss_pred             HHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccCCCeeEEEccc
Q 019093          119 CVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATVTP  198 (346)
Q Consensus       119 l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~akg~~vt~Et~p  198 (346)
                      +.++++.+++.|+++.+|+.......+     ...+...+  .+  ....-.|..|+ +.+.++++++.   .+.+..||
T Consensus       127 l~~~~~~A~~~g~~v~~H~~e~~~~~g-----~~~i~~~~--~~--~~~~i~H~~~l-~~~~~~~la~~---g~~v~~~P  193 (263)
T cd01305         127 LEDILELLRRRGKLFAIHASETRESVG-----MTDIERAL--DL--EPDLLVHGTHL-TDEDLELVREN---GVPVVLCP  193 (263)
T ss_pred             HHHHHHHHHHCCCeeEEecCCCCCCCC-----chhHHHHH--hC--CCCEEEEcCCC-CHHHHHHHHHc---CCcEEECh
Confidence            889999999999999999875421000     01133333  11  11222344444 56778888874   46678898


Q ss_pred             hhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccch-hHHHHHHH
Q 019093          199 QHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNA-PVALSLYA  277 (346)
Q Consensus       199 h~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~-e~~lp~l~  277 (346)
                      ..      ++.- +.+     .||+         .+.++.|. .+.+|||..+..          ++ .-+ |..+-+..
T Consensus       194 ~s------n~~l-~~g-----~~p~---------~~l~~~Gv-~v~lGtD~~~~~----------~~-~~~~~~~~~~~~  240 (263)
T cd01305         194 RS------NLYF-GVG-----IPPV---------AELLKLGI-KVLLGTDNVMVN----------EP-DMWAEMEFLAKY  240 (263)
T ss_pred             hh------HHHh-CCC-----CCCH---------HHHHHCCC-cEEEECCCCccC----------CC-CHHHHHHHHHHH
Confidence            41      1110 111     1443         34455574 444899974421          01 111 22221111


Q ss_pred             HHHHhcCCHHHHHHHHchhhhhh
Q 019093          278 KVFEEMGALDKLEAFTSFNGPDF  300 (346)
Q Consensus       278 ~~~~~~~~l~~lv~~~s~nPAki  300 (346)
                      .......+..++.++.+.|+||+
T Consensus       241 ~~~~~~~~~~~~l~~aT~~gA~~  263 (263)
T cd01305         241 SRLQGYLSPLEILRMATVNAAEF  263 (263)
T ss_pred             hcccccCCHHHHHHHHhhccccC
Confidence            11112347889999999999985

These metallo-dependent hydrolases from archea are part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. They have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. Some members of this subgroup are predicted to be chlorohyrolases.

>COG0402 SsnA Cytosine deaminase and related metal-dependent hydrolases [Nucleotide transport and metabolism / General function prediction only]

Probab=98.08  E-value=0.00011  Score=72.84  Aligned_cols=158  Identities=14%  Similarity=0.099  Sum_probs=85.9

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCCh-hhhH---HHHHHHHHHHHHHhCCCCcEEEEccC--CHHHHHHHHccCCC
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDI-FDRE---KVFIDTILQPLIQRLPQLKVVMEHIT--TMDAVKFVESCKEG  190 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~-~~~E---~~av~~~l~~~la~~~g~~lhi~HvS--t~~~l~~i~~akg~  190 (346)
                      +.+..+.+.+++.|+++-+|+-...-  .. ...|   ...+.+.   ......+-+..+.|..  +.+.++++++   .
T Consensus       198 ~~~~~~~~l~~~~~~~v~iH~~E~~~--e~~~~~~~~g~~~~~~~---~~~g~l~~~~~~~H~~~~~~~e~~~l~~---~  269 (421)
T COG0402         198 ELLESLDELARKYGLPVHIHLAETLD--EVERVLEPYGARPVERL---DLLGLLGSHTLLAHCVHLSEEELELLAE---S  269 (421)
T ss_pred             HHHHHHHHHHhcCCCceEEEecCcHH--HHHHHHhhcCCCHHHHH---HHcCCCCCCeEEEEeccCCHHHHHHHhh---C
Confidence            56777777777899999999764321  00 0011   0011111   1222334566666666  5666777774   3


Q ss_pred             eeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccch-
Q 019093          191 FVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNA-  269 (346)
Q Consensus       191 ~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~-  269 (346)
                      .+++-.||      .++..-   +..  +.|          +++.+..|.--. ++||-+.+...-          .-+ 
T Consensus       270 g~~v~~cP------~sN~~L---~sG--~~p----------~~~~~~~gv~v~-~gTD~~~~~~~~----------d~l~  317 (421)
T COG0402         270 GASVVHCP------RSNLKL---GSG--IAP----------VRRLLERGVNVA-LGTDGAASNNVL----------DMLR  317 (421)
T ss_pred             CCeEEECc------chhccc---cCC--CCC----------HHHHHHcCCCEE-EecCCccccChH----------HHHH
Confidence            46777899      232221   112  333          344566674444 899986653100          001 


Q ss_pred             hHHHHHHHHHHHhcC--CHH--HHHHHHchhhhhhcCC-------CCCCccEEEEe
Q 019093          270 PVALSLYAKVFEEMG--ALD--KLEAFTSFNGPDFYGL-------PRNTSKIKLTK  314 (346)
Q Consensus       270 e~~lp~l~~~~~~~~--~l~--~lv~~~s~nPAki~gl-------~~kdAdlvi~d  314 (346)
                      |.....++.......  +..  ++.++.+.|+||.||+       +.++|||+++|
T Consensus       318 ~~~~a~~l~~~~~~~~~~~~~~~~l~~aT~~gA~alg~~~~G~le~G~~ADlvvld  373 (421)
T COG0402         318 EMRTADLLQKLAGGLLAAQLPGEALDMATLGGAKALGLDDIGSLEVGKKADLVVLD  373 (421)
T ss_pred             HHHHHHHHHHhhcCCCcccchHHHHHHHHhhHHHHcCCcccCCcccccccCEEEEc
Confidence            223333333222211  122  2789999999999994       22489999999

>COG3653 N-acyl-D-aspartate/D-glutamate deacylase [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=98.06  E-value=0.0011  Score=64.24  Aligned_cols=31  Identities=13%  Similarity=0.241  Sum_probs=27.8

Q ss_pred             CCHHHHHHHHchhhhhhcCC-CCC------CccEEEEe
Q 019093          284 GALDKLEAFTSFNGPDFYGL-PRN------TSKIKLTK  314 (346)
Q Consensus       284 ~~l~~lv~~~s~nPAki~gl-~~k------dAdlvi~d  314 (346)
                      ++|++.++.|+..+|+-||| +++      -|||+|||
T Consensus       474 l~Le~av~rmT~~~Ae~~GL~drGlvreG~rADl~viD  511 (579)
T COG3653         474 LSLERAVRRMTGELAEWFGLGDRGLVREGDRADLVVID  511 (579)
T ss_pred             ccHHHHHHHHhccHHHHhCcccccccccccccceEEEc
Confidence            47999999999999999999 454      69999999

>COG1820 NagA N-acetylglucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism]

Probab=98.04  E-value=2.2e-05  Score=75.58  Aligned_cols=36  Identities=19%  Similarity=0.216  Sum_probs=30.7

Q ss_pred             CHHHHHHHHchhhhhhcCCC-CC-------CccEEEEecceeec
Q 019093          285 ALDKLEAFTSFNGPDFYGLP-RN-------TSKIKLTKIPWKVP  320 (346)
Q Consensus       285 ~l~~lv~~~s~nPAki~gl~-~k-------dAdlvi~d~~~~v~  320 (346)
                      ++++.+++.|.||||.+||. ++       +||||++|..+.|.
T Consensus       326 ~~~eAv~maS~~PA~~lgl~~~~G~i~~G~~Adlvvld~d~~v~  369 (380)
T COG1820         326 SLAEAVRMASLNPAKALGLDDRLGSIKPGKDADLVVLDDDLNVK  369 (380)
T ss_pred             CHHHHHHHhhhhHHHHhCCcCcccccCCCcccCEEEECCCCcEE
Confidence            68899999999999999984 42       89999999666664

>PF07969 Amidohydro_3: Amidohydrolase family; InterPro: IPR013108 Amidohydrolases are a diverse superfamily of enzymes which catalyse the hydrolysis of amide or amine bonds in a large number of different substrates including urea, cytosine, AMP, formylmethanofuran, etc [, ]

Probab=97.95  E-value=0.00018  Score=70.50  Aligned_cols=161  Identities=20%  Similarity=0.164  Sum_probs=87.6

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccC--CHHHHHHHHccCCCeeEE
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHIT--TMDAVKFVESCKEGFVAA  194 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvS--t~~~l~~i~~akg~~vt~  194 (346)
                      ..+.++++.+.+.|..+.+||...           .++..++. .+.+ ......+.|.+  +.+.++.+++   ..+.+
T Consensus       225 ~~l~~~v~~a~~~g~~v~vHa~gd-----------~a~~~~l~-a~~~-~~~~~~i~h~~~~~~~~~~~~~~---l~~~~  288 (404)
T PF07969_consen  225 EELEELVRAAREAGLQVAVHAIGD-----------RAIDEALD-AIEA-ARARGRIEHAELIDPDDIERMAE---LGVTA  288 (404)
T ss_dssp             HHHHHHHHHHHHCT-EEEEEEESH-----------HHHHHHHH-HHHH-HTCCHEEEEHCBCCHHHHHHHHH---HTTEE
T ss_pred             hhHHHHHHHHHhcCCeeEEEEcCC-----------chHHhHHH-HHHh-hcccceeeccccCCHHHHHHHHH---hCCcc
Confidence            568999999999999999999532           12333332 1111 11111455554  7777777776   35788


Q ss_pred             Eccchhhccch-hhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHH
Q 019093          195 TVTPQHLVLNR-NALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVAL  273 (346)
Q Consensus       195 Et~ph~L~l~~-~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~l  273 (346)
                      ++.|||+.... +.+... .+.       -|. .....+...+..|..-+ ++||+ |.+..      .+  +.+++...
T Consensus       289 ~~~p~~~~~~~~~~~~~~-~~~-------~~~-~~~~~~~~~~~~Gv~v~-~gsD~-p~~~~------~P--~~~~~~~~  349 (404)
T PF07969_consen  289 SVQPHFLFSWGGEWYEER-LGP-------ERA-RRIYPIRSLLDAGVRVA-LGSDA-PVSPP------NP--FRGIWAAV  349 (404)
T ss_dssp             EECCTHHHHETEETHHHH-HHH-------HCG-GGBTHHHHHHHCTTEEE-E--TT-TTSSC------CH--HHHHHHHH
T ss_pred             ccChhHhhhccchhhhhh-hhh-------HHH-HHHhHHHHHHhccCcee-cCcCC-ccccc------Cc--chhhhhhh
Confidence            99998887665 211100 000       000 11124556677786666 89997 32100      00  01122211


Q ss_pred             HHH-HHHH-------HhcCCHHHHHHHHchhhhhhcCC-CC-C------CccEEE
Q 019093          274 SLY-AKVF-------EEMGALDKLEAFTSFNGPDFYGL-PR-N------TSKIKL  312 (346)
Q Consensus       274 p~l-~~~~-------~~~~~l~~lv~~~s~nPAki~gl-~~-k------dAdlvi  312 (346)
                      ... ....       .+..++++.++.++.|||+.+|+ ++ +      .|||||
T Consensus       350 ~~~~~~~~~~~~~~~~~~ls~~eAl~~~T~~~A~~~g~~~~~Gsl~~Gk~AD~vV  404 (404)
T PF07969_consen  350 TRQMAGERSGPVLGPEQRLSLEEALRAYTSNPARALGLEDRKGSLEPGKLADFVV  404 (404)
T ss_dssp             HHHHCHHTHHHCCGGTGSSHHHHHHHHTTHHHHHHTT-TTTSSSSSTTSBS-EEE
T ss_pred             ccccccccccccccccccCCHHHHHHHHhHHHHHHcCCCCCcceECCCCCcCeEC
Confidence            111 1111       14568999999999999999999 44 2      899987

Also included in this superfamily are the phopshotriesterase enzymes, which hydrolyse P-O bonds. Members participate in a large number of processes including nucleotide metabolism, detoxification and neuronal development. They use a variety of divalent metal cofactors for catalysis: for example adenosine deaminase binds a single zinc ion, phopsphotriesterase binds two, while urease binds nickel. It has been postulated that since some of these proteins, such as those some of those involved in neuronal devlopment, appear to have lost their metal-binding centres, their function may simply be to bind, but not hydrolyse, their target molecules. This entry represents a subset of amidohydrolase domains that participate in different functions including cytosine degradation, atrazine degradation and other metabolic processes. The structure of the domain from Escherichia coli has been studied, and like other amidohydrolases it forms a classical alpha-beta TIM-barrel fold []. The active site is located in the mouth of the enzyme barrel and contains a bound iron ion that coordinates a hydroxyl nucleophile. Substrate binding involves a significant conformational change that sequesters the reaction complex from solvent.; PDB: 4F0R_A 4F0S_A 1V4Y_A 1M7J_A 1RK5_A 1RJP_A 1RJR_A 1RJQ_A 1RK6_A 1V51_A ....

>PF13594 Amidohydro_5: Amidohydrolase; PDB: 4F0R_A 4F0S_A 1NFG_C 2FVM_A 2FVK_A 2FTY_D 1YBQ_B 1POJ_B 1ONW_A 2AQO_B

Probab=97.89  E-value=5.1e-06  Score=60.77  Aligned_cols=34  Identities=15%  Similarity=0.037  Sum_probs=20.8

Q ss_pred             eEEecCccccceecCC-Ccccc--cccc--ccCCceeEE
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLK--AVVP--HSVSHYGRA   35 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~k--e~~~--s~sGGvTtv   35 (346)
                      ++|+||+||+|+|+++ .....  ++..  ...+|+|||
T Consensus        30 ~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~l~~GvTTV   68 (68)
T PF13594_consen   30 KYVMPGFIDMHTHLGEPGWQSLDPETEAAAALAGGVTTV   68 (68)
T ss_dssp             CEEEE-EEEEEE-TTTTCEGGCTCHHHHHHHHHTTEEEE
T ss_pred             CEEeCCeEeeeeccccccccccchhhHHHHHHCcceeeC
Confidence            5899999999999875 22221  1111  235999997

...

>PRK06886 hypothetical protein; Validated

Probab=97.86  E-value=0.0013  Score=63.10  Aligned_cols=157  Identities=19%  Similarity=0.111  Sum_probs=85.0

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHH---------HHHHHHcc
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMD---------AVKFVESC  187 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~---------~l~~i~~a  187 (346)
                      +.+..+|+.++++|++|-+|+-...-   ....+.+.+.+.   .+..-.+.|+.+.|..+-.         .+++++++
T Consensus       162 e~l~~~~~lA~~~g~~Id~Hlde~~~---~~~~~le~l~~~---~~~~Gl~grV~~sH~~~L~~~~~~~~~~~i~~La~a  235 (329)
T PRK06886        162 EAMDILLDTAKSLGKMVHVHVDQFNT---PKEKETEQLCDK---TIEHGMQGRVVAIHGISIGAHSKEYRYRLYQKMREA  235 (329)
T ss_pred             HHHHHHHHHHHHcCCCeEEeECCCCc---hhHHHHHHHHHH---HHHcCCCCCEEEEEeccccCcChhhHHHHHHHHHHc
Confidence            67899999999999999999986431   111111111111   1222234588888887543         25666654


Q ss_pred             CCCeeEEEccchh-hccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCc
Q 019093          188 KEGFVAATVTPQH-LVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGI  266 (346)
Q Consensus       188 kg~~vt~Et~ph~-L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~  266 (346)
                         .+.+=+||.- |+|+...-.    -+...--||++         +.++.|.-=. +|||-..-       +|.+.|.
T Consensus       236 ---gi~Vv~~P~snl~l~~~~~~----~p~~rGv~pv~---------eL~~aGV~V~-lGtDnv~D-------~~~p~g~  291 (329)
T PRK06886        236 ---DMMVIACPMAWIDSNRKEDL----MPFHNALTPAD---------EMIPEGITVA-LGTDNICD-------YMVPLCE  291 (329)
T ss_pred             ---CCeEEECchhhhhhcccccc----CcCCCCCCCHH---------HHHHCCCeEE-EecCCCcc-------cCCCCCC
Confidence               4556677853 222211100    01111123322         3444465455 89996421       2334344


Q ss_pred             cchhHHHHHHHHHHHhcCCHHHHHHHHchhhhhhcCCC
Q 019093          267 YNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLP  304 (346)
Q Consensus       267 ~g~e~~lp~l~~~~~~~~~l~~lv~~~s~nPAki~gl~  304 (346)
                      ..+=..+-++... .+..++.++.++.+.|+||.+||.
T Consensus       292 ~Dmle~~~l~~~~-~~~~~~~~~l~maT~~gAraLgl~  328 (329)
T PRK06886        292 GDMWQELSLLAAG-CRFYDLDEMVNIASINGRKVLGLE  328 (329)
T ss_pred             CCHHHHHHHHHHH-cCCCCHHHHHHHHhhhHHHHhCCC
Confidence            3331112222221 122368999999999999999984

>PRK10812 putative DNAse; Provisional

Probab=97.71  E-value=0.006  Score=56.78  Aligned_cols=119  Identities=17%  Similarity=0.077  Sum_probs=59.5

Q ss_pred             ccccceecCC-Cc-cccccc----ccc-CCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCC
Q 019093            8 PDDWHLHLRD-GD-LLKAVV----PHS-VSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTT   80 (346)
Q Consensus         8 ~ID~HvH~r~-g~-~~ke~~----~s~-sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~   80 (346)
                      +||.|+|+.. .. ...++.    ..+ .-|+..++...      ++++......+.++...    .+  +.++++.|..
T Consensus         3 ~iDtH~Hl~~~~~~~~~~d~~~vl~~a~~~gv~~~~~~~------~~~~~~~~~~~l~~~~~----~v--~~~~GiHP~~   70 (265)
T PRK10812          3 LVDSHCHLDGLDYQSLHKDVDDVLAKAAARDVKFCLAVA------TTLPGYRHMRDLVGERD----NV--VFSCGVHPLN   70 (265)
T ss_pred             eEEeccCCCCccchhhhcCHHHHHHHHHHcCCCEEEEeC------CCHHHHHHHHHHHhhCC----Ce--EEEEEeCCCC
Confidence            6999999963 11 112222    222 36888776653      23444444444433321    22  2233335532


Q ss_pred             -----CHHHHHHHHHcCCeeEE-EEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCC
Q 019093           81 -----SPDEIKLARKTGVVFAV-KLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVT  140 (346)
Q Consensus        81 -----~~~el~~l~~~G~v~~~-Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~  140 (346)
                           ..+++.++.+...++++ ++=+.|......... .. ..+.+.++.++++|+||++|+-+.
T Consensus        71 ~~~~~~~~~l~~~~~~~~vvaIGEiGLD~~~~~~~~~~-Q~-~vf~~ql~lA~e~~~Pv~iH~r~a  134 (265)
T PRK10812         71 QDEPYDVEELRRLAAEEGVVAMGETGLDYYYTPETKVR-QQ-ESFRHHIQIGRELNKPVIVHTRDA  134 (265)
T ss_pred             CCChhHHHHHHHHhcCCCEEEEEeeecCcCCCCCCHHH-HH-HHHHHHHHHHHHhCCCeEEEeeCc
Confidence                 13345555443335555 442221000000001 11 467788899999999999999874

>cd00530 PTE Phosphotriesterase (PTE) catalyzes the hydrolysis of organophosphate nerve agents, including the chemical warfare agents VX, soman, and sarin as well as the insecticide paraoxon

Probab=97.32  E-value=0.0036  Score=58.72  Aligned_cols=153  Identities=15%  Similarity=0.122  Sum_probs=83.3

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHh--CCCCcEEEEccCCHHHHHHHHccCCCeeEE
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQR--LPQLKVVMEHITTMDAVKFVESCKEGFVAA  194 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~--~~g~~lhi~HvSt~~~l~~i~~akg~~vt~  194 (346)
                      ..+.+.++.++++|+||++|+.+..-          +....++ .+.+  ....++.+.|+-...+.+.++++....++.
T Consensus       136 ~~f~~~~~lA~~~~~Pv~iH~~~~~~----------~~~~~l~-~l~~~g~~~~~~vi~H~~~~~~~~~~~~~~~~G~~i  204 (293)
T cd00530         136 KVLRAAARAQKETGVPISTHTQAGLT----------MGLEQLR-ILEEEGVDPSKVVIGHLDRNDDPDYLLKIAALGAYL  204 (293)
T ss_pred             HHHHHHHHHHHHHCCeEEEcCCCCcc----------ccHHHHH-HHHHcCCChhheEEeCCCCCCCHHHHHHHHhCCCEE
Confidence            46778899999999999999987410          0112221 1222  223356899995211233333332112333


Q ss_pred             EccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCcc--EEeecCCCCCCccccccCCCCCCccchhHH
Q 019093          195 TVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRK--FFLGTDSAPHERGRKECACGCAGIYNAPVA  272 (346)
Q Consensus       195 Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id--~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~  272 (346)
                      +.+.-.. +.            ..-.||  .....+.+.++++.|-+|  + ++||- |+......    ..+-.+....
T Consensus       205 ~~~~~~~-~~------------~~~~~~--~~~~~~~l~~~~~~~~~d~il-l~TD~-p~~~~~~~----~~~~~~~~~~  263 (293)
T cd00530         205 EFDGIGK-DK------------IFGYPS--DETRADAVKALIDEGYGDRLL-LSHDV-FRKSYLEK----RYGGHGYDYI  263 (293)
T ss_pred             EeCCCCc-cc------------ccCCCC--HHHHHHHHHHHHHCCCcCCEE-EeCCc-Cchhhhhh----ccCCCChHHH
Confidence            3331000 00            000111  134456788999999888  7 89994 66322100    0111233444


Q ss_pred             HHHHHHHHHhcC-CHHHHHHHHchhhhhhc
Q 019093          273 LSLYAKVFEEMG-ALDKLEAFTSFNGPDFY  301 (346)
Q Consensus       273 lp~l~~~~~~~~-~l~~lv~~~s~nPAki~  301 (346)
                      +..+...+..++ +.+++.+++..||+|+|
T Consensus       264 ~~~~~~~~~~~g~~~e~i~~~~~~N~~~lf  293 (293)
T cd00530         264 LTRFIPRLRERGVTEEQLDTILVENPARFL  293 (293)
T ss_pred             HHHHHHHHHHcCCCHHHHHHHHHHCHHHhC
Confidence            444444444444 89999999999999987

PTE exists as a homodimer with one active site per monomer. The active site is located next to a binuclear metal center, at the C-terminal end of a TIM alpha- beta barrel motif. The native enzyme contains two zinc ions at the active site however these can be replaced with other metals such as cobalt, cadmium, nickel or manganese and the enzyme remains active.

>PF01026 TatD_DNase: TatD related DNase The Pfam entry finds members not in the Prosite definition

Probab=97.32  E-value=0.0094  Score=55.03  Aligned_cols=233  Identities=15%  Similarity=0.127  Sum_probs=108.9

Q ss_pred             cccceecCC-Cc-c-cccccccc-CCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCC---
Q 019093            9 DDWHLHLRD-GD-L-LKAVVPHS-VSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTS---   81 (346)
Q Consensus         9 ID~HvH~r~-g~-~-~ke~~~s~-sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~---   81 (346)
                      ||.|+|+.. .. . ..+.+... ..|++.++.+-.      +.+.++...+.+++ ..  ..+.+..|+  .|...   
T Consensus         1 iD~H~Hl~~~~~~~~~~~~~~~~~~~g~~~~i~~~~------~~~~~~~~~~~~~~-~~--~~v~~~~Gi--HP~~~~~~   69 (255)
T PF01026_consen    1 IDAHCHLDSPRFEEDRPEVLERAREAGVSAIIIVST------DPEDWERVLELASQ-YP--DRVYPALGI--HPWEAHEV   69 (255)
T ss_dssp             EEEEE-TTSGGGTTTHHHHHHHHHHTTEEEEEEEES------SHHHHHHHHHHHHH-TT--TEEEEEE-----GGGGGGH
T ss_pred             CcCccCCCChhhCcCHHHHHHHHHHcCCCEEEEcCC------CHHHhHHHHHHHhc-CC--CeEEEEecC--Ccchhhhh
Confidence            799999986 21 1 12333222 378888876532      22444444444433 22  224333343  55321   


Q ss_pred             ----HHHHHHH--HHcCCeeEE-EEeecCCccCCCCCccChH-HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHH
Q 019093           82 ----PDEIKLA--RKTGVVFAV-KLYPAGATTNSQDGVTDLF-GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVF  153 (346)
Q Consensus        82 ----~~el~~l--~~~G~v~~~-Kif~~~~~~~~~~~~~d~~-~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~a  153 (346)
                          .+++.++  .+..-+.++ .+=+.+.... .... +.| ..+.+.|+.++++++|+.+||.+.             
T Consensus        70 ~~~~~~~l~~l~~~~~~~~~aIGEiGLD~~~~~-~~~~-~~Q~~vF~~ql~lA~~~~~pv~iH~r~a-------------  134 (255)
T PF01026_consen   70 NEEDLEELEELINLNRPKVVAIGEIGLDYYWRN-EEDK-EVQEEVFERQLELAKELNLPVSIHCRKA-------------  134 (255)
T ss_dssp             SHHHHHHHHHHHHHTSTTEEEEEEEEEETTTTS-SSGH-HHHHHHHHHHHHHHHHHTCEEEEEEESH-------------
T ss_pred             hHHHHHHHHHHHHhccccceeeeeeccCccccc-CCcH-HHHHHHHHHHHHHHHHhCCcEEEecCCc-------------
Confidence                1345555  433335444 2211110000 0000 111 467788999999999999999983             


Q ss_pred             HHHHHHHHHHhCCCCc-EEEEccC--CHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCC--hhh
Q 019093          154 IDTILQPLIQRLPQLK-VVMEHIT--TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKR--EIH  228 (346)
Q Consensus       154 v~~~l~~~la~~~g~~-lhi~HvS--t~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~--~~d  228 (346)
                      ...+++ .+.+..+.+ -.|.|.-  +.+.++.+.+   ..++.-                       ++|.+-.  .++
T Consensus       135 ~~~~l~-il~~~~~~~~~~i~H~f~g~~~~~~~~~~---~g~~~S-----------------------~~~~~~~~~~~~  187 (255)
T PF01026_consen  135 HEELLE-ILKEYGPPNLRVIFHCFSGSPEEAKKFLD---LGCYFS-----------------------FSGAITFKNSKK  187 (255)
T ss_dssp             HHHHHH-HHHHTTGGTSEEEETT--S-HHHHHHHHH---TTEEEE-----------------------EEGGGGSTTSHH
T ss_pred             HHHHHH-HHHhccccceeEEEecCCCCHHHHHHHHh---cCceEE-----------------------ecccccccccHH
Confidence            223332 233332211 4577873  3444443332   112222                       2221111  123


Q ss_pred             HHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHH--hcCCHHHHHHHHchhhhhhcC
Q 019093          229 RQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFE--EMGALDKLEAFTSFNGPDFYG  302 (346)
Q Consensus       229 ~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~--~~~~l~~lv~~~s~nPAki~g  302 (346)
                      ...+...+--..|  ++-||- |+....+.     .|-+.-+..++-....+.  +..+++++.+.+..|..++||
T Consensus       188 ~~~~~~~ip~dri--llETD~-P~~~~~~~-----~~~~~~p~~i~~~~~~la~~~~~~~e~~~~~~~~N~~r~f~  255 (255)
T PF01026_consen  188 VRELIKAIPLDRI--LLETDA-PYLAPDPY-----RGKPNEPSNIPKVAQALAEIKGISLEELAQIIYENAKRLFG  255 (255)
T ss_dssp             HHHHHHHS-GGGE--EEE-BT-TSSECTTS-----TTSE--GGGHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHhcCChhhE--EEcCCC-CcCCcccc-----CCCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhC
Confidence            3345566644443  468994 65432211     122333334554443222  345899999999999999997

; InterPro: IPR001130 This family of proteins are related to a large superfamily of metalloenzymes []. TatD, a member of this family has been shown experimentally to be a DNase enzyme []. Allantoinase 3.5.2.5 from EC, N-isopropylammelide isopropyl amidohydrolase 3.5.1 from EC and the SCN1 protein from fission yeast belong to this family.; GO: 0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters; PDB: 3E2V_B 1XWY_A 3GUW_D 3RCM_A 1ZZM_A 2XIO_A 1J6O_A 2GZX_A 3IPW_A 2Y1H_A ....

>COG0084 TatD Mg-dependent DNase [DNA replication, recombination, and repair]

Probab=97.25  E-value=0.05  Score=50.34  Aligned_cols=138  Identities=16%  Similarity=0.190  Sum_probs=73.2

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCC-CCcEEEEccCC--HHHHHHHHccCCCeeE
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLP-QLKVVMEHITT--MDAVKFVESCKEGFVA  193 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~-g~~lhi~HvSt--~~~l~~i~~akg~~vt  193 (346)
                      ..+.+-++.++++++|+++|+-+..             ...++ .|.++. ..+ -|.|.=|  .+.++.+-.. |    
T Consensus       112 ~~F~~ql~lA~~~~lPviIH~R~A~-------------~d~~~-iL~~~~~~~~-gi~HcFsGs~e~a~~~~d~-G----  171 (256)
T COG0084         112 EVFEAQLELAKELNLPVIIHTRDAH-------------EDTLE-ILKEEGAPVG-GVLHCFSGSAEEARKLLDL-G----  171 (256)
T ss_pred             HHHHHHHHHHHHcCCCEEEEccccH-------------HHHHH-HHHhcCCCCC-EEEEccCCCHHHHHHHHHc-C----
Confidence            4566778999999999999999852             22331 233332 244 3556543  3333322211 2    


Q ss_pred             EEccchhhccchhhhccCCCCCceEEeCCCCC--hhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhH
Q 019093          194 ATVTPQHLVLNRNALFQGGLRPHNYCLPVLKR--EIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPV  271 (346)
Q Consensus       194 ~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~--~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~  271 (346)
                           .|+.++                +.+--  .+....+...+--..+  ++=||. |+-.-.     ...|-.+-+.
T Consensus       172 -----~yisis----------------G~itfk~a~~~~ev~~~iPldrL--L~ETDs-Pyl~P~-----p~rGkrNeP~  222 (256)
T COG0084         172 -----FYISIS----------------GIVTFKNAEKLREVARELPLDRL--LLETDA-PYLAPV-----PYRGKRNEPA  222 (256)
T ss_pred             -----eEEEEC----------------ceeecCCcHHHHHHHHhCCHhHe--EeccCC-CCCCCc-----CCCCCCCCch
Confidence                 122221                11111  1233345455443333  256885 774211     1124333444


Q ss_pred             HHHHHHHHHHh--cCCHHHHHHHHchhhhhhcCC
Q 019093          272 ALSLYAKVFEE--MGALDKLEAFTSFNGPDFYGL  303 (346)
Q Consensus       272 ~lp~l~~~~~~--~~~l~~lv~~~s~nPAki~gl  303 (346)
                      .++...+.+.+  ..+.+++.+.++.|--++||+
T Consensus       223 ~v~~v~~~iAelk~~~~eeva~~t~~N~~~lf~~  256 (256)
T COG0084         223 YVRHVAEKLAELKGISAEEVAEITTENAKRLFGL  256 (256)
T ss_pred             HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcC
Confidence            56655543333  348999999999999999985

>PRK11449 putative deoxyribonuclease YjjV; Provisional

Probab=97.19  E-value=0.053  Score=50.23  Aligned_cols=138  Identities=16%  Similarity=0.132  Sum_probs=73.2

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCC--cEEEEccCCHHHHHHHHccCCCeeEE
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQL--KVVMEHITTMDAVKFVESCKEGFVAA  194 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~--~lhi~HvSt~~~l~~i~~akg~~vt~  194 (346)
                      ..+.+.++.++++++||++|+.+..             ..++  .+.+..+.  +. |.|.=| .+.+..+++-....  
T Consensus       114 ~vf~~ql~lA~~~~~Pv~iH~r~a~-------------~~~~--~il~~~~~~~~~-i~H~fs-G~~~~a~~~l~~G~--  174 (258)
T PRK11449        114 WLLDEQLKLAKRYDLPVILHSRRTH-------------DKLA--MHLKRHDLPRTG-VVHGFS-GSLQQAERFVQLGY--  174 (258)
T ss_pred             HHHHHHHHHHHHhCCCEEEEecCcc-------------HHHH--HHHHhcCCCCCe-EEEcCC-CCHHHHHHHHHCCC--
Confidence            4677888999999999999999742             1222  12222222  33 445433 22333333210111  


Q ss_pred             EccchhhccchhhhccCCCCCceEEeCCC---CChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhH
Q 019093          195 TVTPQHLVLNRNALFQGGLRPHNYCLPVL---KREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPV  271 (346)
Q Consensus       195 Et~ph~L~l~~~~~~~~~~~~~~k~~PPL---R~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~  271 (346)
                           |+                -+++.+   +.++-| .+.+.+-.+.| . +.||. |+.....     ..|-++-..
T Consensus       175 -----~i----------------S~~g~it~~~~~~~~-~~~~~ipldri-L-~ETD~-P~l~p~~-----~~~~~n~p~  224 (258)
T PRK11449        175 -----KI----------------GVGGTITYPRASKTR-DVIAKLPLASL-L-LETDA-PDMPLNG-----FQGQPNRPE  224 (258)
T ss_pred             -----EE----------------EeCccccccCcHHHH-HHHHhCChhhE-E-EecCC-CCCCCCC-----CCCCCCCCh
Confidence                 11                122222   223333 45566655665 4 79996 7742110     113333334


Q ss_pred             HHHHHHHH-HH-hcCCHHHHHHHHchhhhhhcCC
Q 019093          272 ALSLYAKV-FE-EMGALDKLEAFTSFNGPDFYGL  303 (346)
Q Consensus       272 ~lp~l~~~-~~-~~~~l~~lv~~~s~nPAki~gl  303 (346)
                      .++-.+.. .. +..+.+.+.+.+..|-.++||+
T Consensus       225 ~~~~~~~~ia~l~~~~~~el~~~~~~N~~~lf~~  258 (258)
T PRK11449        225 QAARVFDVLCELRPEPADEIAEVLLNNTYTLFNV  258 (258)
T ss_pred             HHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhCc
Confidence            45554432 22 2347889999999999999986

>COG0804 UreC Urea amidohydrolase (urease) alpha subunit [Amino acid transport and metabolism]

Probab=97.17  E-value=0.0029  Score=60.98  Aligned_cols=157  Identities=15%  Similarity=0.125  Sum_probs=91.2

Q ss_pred             eEEecCccccceecCCCccccccccccCCceeEEEeC---CCCC--CCCCcHHHHHHHHHHHHhhCCC-CccEEEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVM---PNLK--PPITTTAAAVAYRESILKALPA-SSNFTPLMTLY   75 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~g~~~ke~~~s~sGGvTtvv~m---Pnt~--p~~~~~~~~~~~~~~~~~~~~~-~vd~~~~~~~~   75 (346)
                      ++|--|.||.|+||=.++.-.+-+.   .|+||++-=   |.+.  ....++..  ...+++-++... .++++|.+-- 
T Consensus       125 ~I~TAGGiDtHiHfI~Pqqi~~Al~---sGiTtmiGGGtGpa~Gt~aTT~TpG~--w~i~rMl~a~d~~p~N~g~lgKG-  198 (568)
T COG0804         125 KIVTAGGIDTHIHFICPQQIEEALA---SGITTMIGGGTGPADGTNATTCTPGP--WHIARMLQAADGLPMNIGFLGKG-  198 (568)
T ss_pred             eEEeeccccceeEEecHHHHHHHHh---cCcEEEecCccCCCCCcccccccCCH--HHHHHHHHhhhcCceeeEEeecC-
Confidence            4677899999999864322223333   455555441   3221  11112221  222233222211 2788776542 


Q ss_pred             eCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHH
Q 019093           76 LTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFID  155 (346)
Q Consensus        76 ~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~  155 (346)
                       + .....-|.+.+++| .+|+|++-.+       +..-  ..+..+|+-+-+.+.-|++|...-.        |+-   
T Consensus       199 -n-~s~~~~L~Eqi~aG-a~GlKlHEDW-------G~Tp--aaI~~~L~VAD~~DvqVaiHtDTLN--------EsG---  255 (568)
T COG0804         199 -N-ASNPAPLAEQIEAG-AIGLKLHEDW-------GATP--AAIDTCLSVADEYDVQVAIHTDTLN--------ESG---  255 (568)
T ss_pred             -C-CCCchhHHHHHhhc-cceeEeeccc-------CCCH--HHHHHHHhhhhhhceEEEEeecccc--------ccc---
Confidence             2 23455688888889 6899998533       3323  6788899999999999999987421        111   


Q ss_pred             HHHHHHHHhCCCCcEEEEccCC---HHHHHHHHccC
Q 019093          156 TILQPLIQRLPQLKVVMEHITT---MDAVKFVESCK  188 (346)
Q Consensus       156 ~~l~~~la~~~g~~lhi~HvSt---~~~l~~i~~ak  188 (346)
                       .+++.++.+.|.-+|-.|.--   .-+=++|+-+.
T Consensus       256 -fvEdTi~A~~gRtIHtyHtEGAGGGHAPDiikv~~  290 (568)
T COG0804         256 -FVEDTIAAIKGRTIHTYHTEGAGGGHAPDIIKVAG  290 (568)
T ss_pred             -chHhHHHHhcCceeEEeeccCCCCCCccHHHHHcc
Confidence             223356777788899999753   23445666543

>COG3454 Metal-dependent hydrolase involved in phosphonate metabolism [Inorganic ion transport and metabolism]

Probab=96.85  E-value=0.0021  Score=60.36  Aligned_cols=64  Identities=17%  Similarity=0.149  Sum_probs=48.1

Q ss_pred             HHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHH--HHHHhcCCHHHHHHHHchhhhhhcCC-CCC--
Q 019093          232 VVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYA--KVFEEMGALDKLEAFTSFNGPDFYGL-PRN--  306 (346)
Q Consensus       232 L~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~--~~~~~~~~l~~lv~~~s~nPAki~gl-~~k--  306 (346)
                      -.+....|.+|+ ++||..|.+                  +|...+  .......+|++.+++.|.|||+.+|| +++  
T Consensus       286 A~ela~~glLDi-LsSDY~P~S------------------Ll~A~F~La~~~~~~~lpqAvalvt~nPA~algl~DRG~I  346 (377)
T COG3454         286 ARELAQHGLLDI-LSSDYVPAS------------------LLHAAFRLADLGSNISLPQAVALVTKNPARALGLTDRGRI  346 (377)
T ss_pred             HHHHHhCCceee-ecccCCcHH------------------HHHHHHHHhhhhcccCHHHHHHHhccCHHHhcCCCccccc
Confidence            345677899999 999999975                  233322  22223348999999999999999999 554  


Q ss_pred             ----CccEEEEe
Q 019093          307 ----TSKIKLTK  314 (346)
Q Consensus       307 ----dAdlvi~d  314 (346)
                          .|||+.+.
T Consensus       347 a~GlrADlv~v~  358 (377)
T COG3454         347 APGLRADLVRVR  358 (377)
T ss_pred             ccccccceEEEe
Confidence                89999874

>PRK09875 putative hydrolase; Provisional

Probab=96.64  E-value=0.054  Score=51.14  Aligned_cols=146  Identities=12%  Similarity=0.172  Sum_probs=82.9

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCC---cEEEEccCCHHHHHHHHcc--CCCe
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQL---KVVMEHITTMDAVKFVESC--KEGF  191 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~---~lhi~HvSt~~~l~~i~~a--kg~~  191 (346)
                      ..+..+.+..+++|.||.+|++-...          .. ..+  .+.+..|+   |+.|.|+.....++.+++.  +|. 
T Consensus       139 kvl~Aaa~a~~~TG~pi~~Ht~~~~~----------g~-e~l--~il~e~Gvd~~rvvi~H~d~~~d~~~~~~l~~~G~-  204 (292)
T PRK09875        139 KVFIAAALAHNQTGRPISTHTSFSTM----------GL-EQL--ALLQAHGVDLSRVTVGHCDLKDNLDNILKMIDLGA-  204 (292)
T ss_pred             HHHHHHHHHHHHHCCcEEEcCCCccc----------hH-HHH--HHHHHcCcCcceEEEeCCCCCCCHHHHHHHHHcCC-
Confidence            45666677788999999999875421          11 223  34455576   8999999643444444432  244 


Q ss_pred             eEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHH-HHHHHHHcC-CccEEeecCCCCCCccccccCCCCCCccch
Q 019093          192 VAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQ-AVVSAVTSG-SRKFFLGTDSAPHERGRKECACGCAGIYNA  269 (346)
Q Consensus       192 vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~-aL~~al~~G-~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~  269 (346)
                       +.|-+    .+        |.+.+   .|    .+.|. +|...+..| .=.+++++|=...     . .+...|-+|.
T Consensus       205 -~l~fD----~~--------g~~~~---~p----d~~r~~~i~~L~~~Gy~drilLS~D~~~~-----~-~~~~~gg~G~  258 (292)
T PRK09875        205 -YVQFD----TI--------GKNSY---YP----DEKRIAMLHALRDRGLLNRVMLSMDITRR-----S-HLKANGGYGY  258 (292)
T ss_pred             -EEEec----cC--------CCccc---CC----HHHHHHHHHHHHhcCCCCeEEEeCCCCCc-----c-cccccCCCCh
Confidence             44432    01        11111   12    23444 444455667 3345577776322     1 1112233566


Q ss_pred             hHHHHHHHHHHHhcC-CHHHHHHHHchhhhhhcC
Q 019093          270 PVALSLYAKVFEEMG-ALDKLEAFTSFNGPDFYG  302 (346)
Q Consensus       270 e~~lp~l~~~~~~~~-~l~~lv~~~s~nPAki~g  302 (346)
                      .+.+.-+.-.+.++| +-+++-+++..||+|+|+
T Consensus       259 ~~i~~~~ip~L~~~Gvse~~I~~m~~~NP~r~~~  292 (292)
T PRK09875        259 DYLLTTFIPQLRQSGFSQADVDVMLRENPSQFFQ  292 (292)
T ss_pred             hHHHHHHHHHHHHcCCCHHHHHHHHHHCHHHHhC
Confidence            666665554445554 788999999999999985

>COG1099 Predicted metal-dependent hydrolases with the TIM-barrel fold [General function prediction only]

Probab=96.63  E-value=0.028  Score=50.33  Aligned_cols=151  Identities=21%  Similarity=0.161  Sum_probs=79.3

Q ss_pred             ccccceecCC-CccccccccccC-CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhh-----CCCCccEEEEEEEEeCCCC
Q 019093            8 PDDWHLHLRD-GDLLKAVVPHSV-SHYGRAIVMPNLKPPITTTAAAVAYRESILKA-----LPASSNFTPLMTLYLTDTT   80 (346)
Q Consensus         8 ~ID~HvH~r~-g~~~ke~~~s~s-GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~-----~~~~vd~~~~~~~~~~~~~   80 (346)
                      .||.|+|+.. +.+   |++.-+ -|+-+|+......-+..+++.+.+..++.-..     +...++..+  +++.+|..
T Consensus         2 ~iD~HiH~d~r~~e---DlekMa~sGI~~Vit~AhdP~~~~~~~v~~~h~~rl~~~E~~Ra~~~Gl~~~v--avGvHPr~   76 (254)
T COG1099           2 YIDSHIHLDVRGFE---DLEKMALSGIREVITLAHDPYPMKTAEVYLDHFRRLLGVEPERAEKAGLKLKV--AVGVHPRA   76 (254)
T ss_pred             ccccccccccccHH---HHHHHHHhChhhhhhcccCCCCcccHHHHHHHHHHHHccchhhHHhhCceeeE--EeccCCCC
Confidence            5899999865 443   333322 45555555433223456778888777764321     111144433  44446544


Q ss_pred             CHHHH-------HHHHH-cCCeeEEEEeecCCccCCCCCccCh-HHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHH
Q 019093           81 SPDEI-------KLARK-TGVVFAVKLYPAGATTNSQDGVTDL-FGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREK  151 (346)
Q Consensus        81 ~~~el-------~~l~~-~G~v~~~Kif~~~~~~~~~~~~~d~-~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~  151 (346)
                      .+.++       .++.. .+ |++|-     ..+..  ..++. -..+.+-|+.+++++.|+++|.=...-        .
T Consensus        77 iP~e~~~~l~~L~~~l~~e~-VvAiG-----EiGLe--~~t~~E~evf~~QL~LA~e~dvPviVHTPr~nK--------~  140 (254)
T COG1099          77 IPPELEEVLEELEELLSNED-VVAIG-----EIGLE--EATDEEKEVFREQLELARELDVPVIVHTPRRNK--------K  140 (254)
T ss_pred             CCchHHHHHHHHHhhcccCC-eeEee-----ecccc--cCCHHHHHHHHHHHHHHHHcCCcEEEeCCCCcc--------h
Confidence            33333       33322 23 43431     00100  11121 146778899999999999999764321        2


Q ss_pred             HHHHHHHHHHHHhCCC---CcEEEEccCCHHHHH
Q 019093          152 VFIDTILQPLIQRLPQ---LKVVMEHITTMDAVK  182 (346)
Q Consensus       152 ~av~~~l~~~la~~~g---~~lhi~HvSt~~~l~  182 (346)
                      ++..+++  .+....|   -.+.|-|+ +.+.++
T Consensus       141 e~t~~il--di~~~~~l~~~lvvIDH~-N~etv~  171 (254)
T COG1099         141 EATSKIL--DILIESGLKPSLVVIDHV-NEETVD  171 (254)
T ss_pred             hHHHHHH--HHHHHcCCChhheehhcc-cHHHHH
Confidence            2344555  3443333   45778887 455666

>PRK10425 DNase TatD; Provisional

Probab=96.60  E-value=0.49  Score=43.86  Aligned_cols=36  Identities=25%  Similarity=0.253  Sum_probs=26.0

Q ss_pred             chhHHHHHHHHHHHh--cCCHHHHHHHHchhhhhhcCC
Q 019093          268 NAPVALSLYAKVFEE--MGALDKLEAFTSFNGPDFYGL  303 (346)
Q Consensus       268 g~e~~lp~l~~~~~~--~~~l~~lv~~~s~nPAki~gl  303 (346)
                      +-...++.....+.+  ..+.+++.+.+..|--++||+
T Consensus       221 n~P~~i~~v~~~iA~l~~~~~~~v~~~~~~N~~~lf~~  258 (258)
T PRK10425        221 NEPAFLPHILQRIAHWRGEDAAWLAATTDANARTLFGL  258 (258)
T ss_pred             CCcHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhCc
Confidence            334556666544333  348999999999999999986

>KOG3968 consensus Atrazine chlorohydrolase/guanine deaminase [Nucleotide transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.41  E-value=0.04  Score=53.59  Aligned_cols=72  Identities=11%  Similarity=0.001  Sum_probs=48.4

Q ss_pred             HHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHH--HHHHHH--hcCCHHHHHHHHchhhhhhcCCCC----
Q 019093          234 SAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSL--YAKVFE--EMGALDKLEAFTSFNGPDFYGLPR----  305 (346)
Q Consensus       234 ~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~--l~~~~~--~~~~l~~lv~~~s~nPAki~gl~~----  305 (346)
                      +.|..|.+-- +|||-+|.+.-+           -+-..+|+  .+....  .+.+++++..+.+-|.|+.+|+..    
T Consensus       316 ~lL~~~v~Vg-LGtDv~~~s~l~-----------a~r~A~~~s~hL~~~~~~~~Ls~~e~L~lATi~GA~aLg~d~~~Gs  383 (439)
T KOG3968|consen  316 ELLDIGVIVG-LGTDVSGCSILN-----------ALRQAMPMSMHLACVLDVMKLSMEEALYLATIGGAKALGRDDTHGS  383 (439)
T ss_pred             HHHhcCceEe-ecCCccccccHH-----------HHHHHHHHHHHHHhccCcccCCHHHHHHHHhccchhhccCCCcccc
Confidence            4567788888 899998853211           01112222  222222  246899999999999999999954    


Q ss_pred             ----CCccEEEEe-cce
Q 019093          306 ----NTSKIKLTK-IPW  317 (346)
Q Consensus       306 ----kdAdlvi~d-~~~  317 (346)
                          |.+|++++| ..|
T Consensus       384 ~eVGK~fDai~id~s~~  400 (439)
T KOG3968|consen  384 LEVGKYFDAIIIDLSAP  400 (439)
T ss_pred             eecccccceEEEeCCCC
Confidence                389999999 555

>cd01308 Isoaspartyl-dipeptidase Isoaspartyl dipeptidase hydrolyzes the beta-L-isoaspartyl linkages in dipeptides, as part of the degradative pathway to eliminate proteins with beta-L-isoaspartyl peptide bonds, bonds whereby the beta-group of an aspartate forms the peptide link with the amino group of the following amino acid

Probab=94.90  E-value=0.093  Score=51.23  Aligned_cols=176  Identities=12%  Similarity=0.048  Sum_probs=97.8

Q ss_pred             eEEecCccccceecCC-Ccc---ccccc-----cccCCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-GDL---LKAVV-----PHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLM   72 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~---~ke~~-----~s~sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~   72 (346)
                      .+|+||+||.|+|+.. +..   ...+.     +...||+||++||+++.+.....+.+....+.+.+...  ..|..++
T Consensus        50 ~~v~PG~id~H~H~~~~~~~~~~~~~~~~~~~~~~~~~G~tt~~d~~~~~~~~~~~~~~~~~~~~~~~~Gv--~~v~~~~  127 (387)
T cd01308          50 KILVPGFIDQHVHIIGGGGEGGPSTRTPEVTLSDLTTAGVTTVVGCLGTDGISRSMEDLLAKARALEEEGI--TCFVYTG  127 (387)
T ss_pred             CEEccCeeehhhCcccccCCCcccccCHHHHHHHHHhCCceEEecCcCCCCCCCCHHHHHHHHHHHHHhCC--EEEEEec
Confidence            4799999999999865 211   11111     11249999999999665554556655555544443322  2332222


Q ss_pred             EEEeCCCC---CH-HHHHHHHH---cCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCC------cEEEecCC
Q 019093           73 TLYLTDTT---SP-DEIKLARK---TGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNM------PLLVHGEV  139 (346)
Q Consensus        73 ~~~~~~~~---~~-~el~~l~~---~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~------~v~vHaE~  139 (346)
                      ........   .. .++..+.+   .| +.+++-+.        ..-... ..+.+++++++..+.      .+.+|...
T Consensus       128 ~~~~~~~~~~~~~~~~~~~i~~~~~~g-~~~~~~~~--------~~~~~~-~~~~~~~~~a~~~~~~~~~~~~~~vh~~~  197 (387)
T cd01308         128 SYEVPTRTITGSIRKDLLLIDKVIGVG-EIAISDHR--------SSQPTV-EELARIAAEARVGGLLGGKAGIVHIHLGD  197 (387)
T ss_pred             ccCCCCcCchhhHHHHHHHHHHhcCcc-eEEEcCCC--------CCCCCH-HHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence            11001000   01 12322211   12 22322111        111233 677788888875332      36666664


Q ss_pred             CCCCCChhhhHHHHHHHHHHHHHHhCCCCcE-EEEccCCHHHHH----HHHccC-C--CeeEEEccchhh
Q 019093          140 TDPIVDIFDREKVFIDTILQPLIQRLPQLKV-VMEHITTMDAVK----FVESCK-E--GFVAATVTPQHL  201 (346)
Q Consensus       140 ~~~~~~~~~~E~~av~~~l~~~la~~~g~~l-hi~HvSt~~~l~----~i~~ak-g--~~vt~Et~ph~L  201 (346)
                      .          ..++.+++  .+.+..|+++ |++|.++..+.+    .++.++ |  +.+.++++|||+
T Consensus       198 ~----------~~~~~~i~--~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~i~~~~~~~~~  255 (387)
T cd01308         198 G----------KRALSPIF--ELIEETEIPITQFLPTHINRTAPLFEQGVEFAKMGGTIDLTSSIDPQFR  255 (387)
T ss_pred             c----------hHHHHHHH--HHHHhcCCCcceeECCcccCCHHHHHHHHHHHHcCCcEEEECCCCcccc
Confidence            3          23566666  5777779988 999999877777    455554 4  577888899877

Formation of this bond is a spontaneous nonenzymatic reaction in nature and can profoundly effect the function of the protein. Isoaspartyl dipeptidase is an octameric enzyme that contains a binuclear zinc center in the active site of each subunit and shows a strong preference of hydrolyzing Asp-Leu dipeptides.

>COG1831 Predicted metal-dependent hydrolase (urease superfamily) [General function prediction only]

Probab=93.12  E-value=2  Score=39.68  Aligned_cols=135  Identities=17%  Similarity=0.173  Sum_probs=78.4

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCc--EEEEccCCHHHHHHHHccCCCeeEE
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLK--VVMEHITTMDAVKFVESCKEGFVAA  194 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~--lhi~HvSt~~~l~~i~~akg~~vt~  194 (346)
                      ..|..+|+.+++.|++|.+|.|+.+-         +.+.++-  .+|+..|.+  -.+.|-+++.-           ..|
T Consensus       145 ~vl~~a~elA~dvdc~vqLHtes~~~---------~~~~~i~--~~ak~~G~~~~~VVkHha~p~v-----------~~~  202 (285)
T COG1831         145 EVLEYAMELAKDVDCAVQLHTESLDE---------ETYEEIA--EMAKEAGIKPYRVVKHHAPPLV-----------LKC  202 (285)
T ss_pred             HHHHHHHHHhhcCCCcEEEecCCCCh---------HHHHHHH--HHHHHhCCCcceeEeecCCccc-----------hhh
Confidence            56788999999999999999998642         1233344  466677752  23444433211           112


Q ss_pred             EccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHH
Q 019093          195 TVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALS  274 (346)
Q Consensus       195 Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp  274 (346)
                      |.              .|      ++|.+-  ..|..+.++++.|.-=+ +=||..    +++..+-..-|--.    +|
T Consensus       203 ~~--------------~G------i~pSV~--asr~~v~~a~~~g~~Fm-mETDyI----DDp~RpgavL~Pkt----VP  251 (285)
T COG1831         203 EE--------------VG------IFPSVP--ASRKNVEDAAELGPRFM-METDYI----DDPRRPGAVLGPKT----VP  251 (285)
T ss_pred             hh--------------cC------cCCccc--ccHHHHHHHHhcCCceE-eecccc----cCcccCCCcCCccc----hh
Confidence            21              01      233332  45557888888888666 888863    34332211113222    44


Q ss_pred             HHHHHHHhcC--CHHHHHHHHchhhhhhcCCC
Q 019093          275 LYAKVFEEMG--ALDKLEAFTSFNGPDFYGLP  304 (346)
Q Consensus       275 ~l~~~~~~~~--~l~~lv~~~s~nPAki~gl~  304 (346)
                      -=...+.+++  +-+.+.+.+-.||.++||+.
T Consensus       252 rr~~~i~~~g~~~ee~vy~i~~E~pe~VYg~~  283 (285)
T COG1831         252 RRTREILEKGDLTEEDVYRIHVENPERVYGIE  283 (285)
T ss_pred             HHHHHHHHhcCCcHHHHHHHHHhCHHHHhCcc
Confidence            2111122344  57889999999999999973

>PF02126 PTE: Phosphotriesterase family; InterPro: IPR001559 Synonym(s): Paraoxonase, A-esterase, Aryltriphosphatase, Phosphotriesterase, Paraoxon hydrolase Bacteria such as Brevundimonas diminuta (Pseudomonas diminuta) harbour a plasmid that carries the gene for Aryldialkylphosphatase (3

Probab=92.37  E-value=0.24  Score=47.16  Aligned_cols=152  Identities=14%  Similarity=0.165  Sum_probs=77.6

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCC---CcEEEEccCCHHHHHHHHcc--CCCe
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQ---LKVVMEHITTMDAVKFVESC--KEGF  191 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g---~~lhi~HvSt~~~l~~i~~a--kg~~  191 (346)
                      ..++.+-+..+++|+||++|++-..-    .-.|   +.+++     +..|   -++.|+|+-....++.+++.  +|..
T Consensus       142 k~lrAaa~A~~~TG~pI~~H~~~g~~----~~~e---~~~il-----~e~Gv~~~rvvigH~D~~~D~~y~~~la~~G~~  209 (308)
T PF02126_consen  142 KVLRAAARAHKETGAPISTHTGRGTR----MGLE---QLDIL-----EEEGVDPSRVVIGHMDRNPDLDYHRELADRGVY  209 (308)
T ss_dssp             HHHHHHHHHHHHHT-EEEEEESTTGT----CHHH---HHHHH-----HHTT--GGGEEETSGGGST-HHHHHHHHHTT-E
T ss_pred             HHHHHHHHHHHHhCCeEEEcCCCCCc----CHHH---HHHHH-----HHcCCChhHeEEeCCCCCCCHHHHHHHHhcCCE
Confidence            34555556668889999999986530    0112   11222     2224   47999999976666665543  2666


Q ss_pred             eEEEccchhhccchhhhccCCCCCceEEeCCCC--ChhhH-HHHHHHHHcCCcc-EEeecCCCCCCccccccCCCCCCcc
Q 019093          192 VAATVTPQHLVLNRNALFQGGLRPHNYCLPVLK--REIHR-QAVVSAVTSGSRK-FFLGTDSAPHERGRKECACGCAGIY  267 (346)
Q Consensus       192 vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR--~~~d~-~aL~~al~~G~Id-~~i~SDHaP~~~~~K~~~~~~~G~~  267 (346)
                      +..++..+.++         ++    ..||.+.  +.++| +.|.+.+..|-.| ++++.|=+-.+   +...++..| .
T Consensus       210 l~~D~~g~~~~---------g~----~~~~~~~~~~d~~ri~~l~~L~~~Gy~~qIlLS~D~~~k~---~~~~~gg~g-~  272 (308)
T PF02126_consen  210 LEFDTIGREFS---------GK----DKNPRVGYPPDEERIELLKELIEEGYADQILLSHDIGRKS---RLYRYGGGG-Y  272 (308)
T ss_dssp             EEETTTT-B-T---------TT----TTCHSCTTS-HHHHHHHHHHHHHTTTGGGEEE-HHHESEE---GSSSCCHHH-H
T ss_pred             EEecCCccccc---------Cc----ccCccCCCCCHHHHHHHHHHHHHcCCcCcEEEeccccccc---cccccCCCC-c
Confidence            66555543221         10    0111111  23333 3555667788884 44666643311   110111112 2


Q ss_pred             ch----hHHHHHHHHHHHhcC-CHHHHHHHHchhhhhhc
Q 019093          268 NA----PVALSLYAKVFEEMG-ALDKLEAFTSFNGPDFY  301 (346)
Q Consensus       268 g~----e~~lp~l~~~~~~~~-~l~~lv~~~s~nPAki~  301 (346)
                      |.    +..+|.|.    ++| +-+++-+++..||+|+|
T Consensus       273 ~~~~i~~~fiP~L~----~~Gv~~~~i~~ilv~NP~r~l  307 (308)
T PF02126_consen  273 GYIYILTRFIPRLK----ERGVSEEDIDKILVENPARIL  307 (308)
T ss_dssp             TTTHHHHTHHHHHH----HTTS-HHHHHHHHTHHHHHHH
T ss_pred             cHHHHHHHHHHHHH----HcCCCHHHHHHHHHHCHHHHc
Confidence            22    44555443    344 77899999999999997

1.8.1 from EC) (PTE) (also known as parathion hydrolase). This enzyme has attracted interest because of its potential use in the detoxification of chemical waste and warfare agents and its ability to degrade agricultural pesticides such as parathion. It acts specifically on synthetic organophosphate triesters and phosphorofluoridates. It does not seem to have a natural occuring substrate and may thus have optimally evolved for utilizing paraoxon. Aryldialkylphosphatase belongs to a family [, ] of enzymes that possess a binuclear zinc metal centre at their active site. The two zinc ions are coordinated by six different residues, six of which being histidines. This family so far includes, in addition to the parathion hydrolase, the following proteins: Escherichia coli protein Php, the substrate of which is not yet known. Mycobacterium tuberculosis phosphotriesterase homology protein Rv0230C. Mammalian phosphotriesterase related protein (PTER) (RPR-1). ; GO: 0008270 zinc ion binding, 0016788 hydrolase activity, acting on ester bonds, 0009056 catabolic process; PDB: 3MSR_A 3OVG_D 3K2G_C 1BF6_B 3OQE_A 3C86_A 3SO7_A 2D2G_A 2R1P_A 2D2H_A ....

>smart00518 AP2Ec AP endonuclease family 2

Probab=90.03  E-value=8.6  Score=35.36  Aligned_cols=112  Identities=12%  Similarity=0.037  Sum_probs=67.3

Q ss_pred             HHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCC-CCCC-C--hhhhHHHHHHHH
Q 019093           82 PDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVT-DPIV-D--IFDREKVFIDTI  157 (346)
Q Consensus        82 ~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~-~~~~-~--~~~~E~~av~~~  157 (346)
                      .+.+.++.+.| +.++-+|+........... +. ..+.++-+.+++.|+.+.+|+--. .+.. +  ........+.+.
T Consensus        13 ~~~~~~~~~~G-~~~vel~~~~~~~~~~~~~-~~-~~~~~l~~~~~~~gl~ls~h~p~~~nl~s~d~~~r~~~~~~l~~~   89 (273)
T smart00518       13 YKAFIEAVDIG-ARSFQLFLGNPRSWKGVRL-SE-ETAEKFKEALKENNIDVSVHAPYLINLASPDKEKVEKSIERLIDE   89 (273)
T ss_pred             hHHHHHHHHcC-CCEEEEECCCCCCCCCCCC-CH-HHHHHHHHHHHHcCCCEEEECCceecCCCCCHHHHHHHHHHHHHH
Confidence            35677777888 7889988753211111112 22 456677777778899999997421 1211 1  122333456667


Q ss_pred             HHHHHHhCCCCcEEEEccCC------HH-------HHHHHHccC-CCeeEEEccc
Q 019093          158 LQPLIQRLPQLKVVMEHITT------MD-------AVKFVESCK-EGFVAATVTP  198 (346)
Q Consensus       158 l~~~la~~~g~~lhi~HvSt------~~-------~l~~i~~ak-g~~vt~Et~p  198 (346)
                      +  .+|+..|++..+.|...      .+       +++.+.+.+ |+.+..|.+|
T Consensus        90 i--~~A~~lGa~~vv~h~g~~~~~~~e~~~~~~~~~l~~l~~~~~gv~l~lEn~~  142 (273)
T smart00518       90 I--KRCEELGIKALVFHPGSYLKQSKEEALNRIIESLNEVIDETKGVVILLETTA  142 (273)
T ss_pred             H--HHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHHHHhccCCcEEEEeccC
Confidence            7  68999999998888753      23       222222223 6788889875

These endonucleases play a role in DNA repair. Cleave phosphodiester bonds at apurinic or apyrimidinic sites

>cd01320 ADA Adenosine deaminase (ADA) is a monomeric zinc dependent enzyme which catalyzes the irreversible hydrolytic deamination of both adenosine, as well as desoxyadenosine, to ammonia and inosine or desoxyinosine, respectively

Probab=89.51  E-value=19  Score=34.05  Aligned_cols=68  Identities=15%  Similarity=0.081  Sum_probs=42.0

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccC-CHHHHHHHHccCCCeeEEE
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHIT-TMDAVKFVESCKEGFVAAT  195 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvS-t~~~l~~i~~akg~~vt~E  195 (346)
                      ..+.++++.+++.|.++.+|+....-     ..   .+...+  .... +..=.|..+++ ..+.++++++   ..+.++
T Consensus       173 ~~~~~~~~~A~~~g~~v~~H~~E~~~-----~~---~~~~a~--~~~g-~~~i~H~~~l~~~~~~~~~l~~---~gi~v~  238 (325)
T cd01320         173 EKFVRAFQRAREAGLRLTAHAGEAGG-----PE---SVRDAL--DLLG-AERIGHGIRAIEDPELVKRLAE---RNIPLE  238 (325)
T ss_pred             HHHHHHHHHHHHCCCceEEeCCCCCC-----HH---HHHHHH--HHcC-CcccchhhccCccHHHHHHHHH---cCCeEE
Confidence            67889999999999999999864311     01   121222  1011 12223555555 3557888876   358889


Q ss_pred             ccc
Q 019093          196 VTP  198 (346)
Q Consensus       196 t~p  198 (346)
                      +||
T Consensus       239 ~~P  241 (325)
T cd01320         239 VCP  241 (325)
T ss_pred             ECC
Confidence            999

ADA plays an important role in the purine pathway. Low, as well as high levels of ADA activity have been linked to several diseases.

>COG4464 CapC Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]

Probab=88.58  E-value=1.2  Score=39.86  Aligned_cols=47  Identities=13%  Similarity=0.052  Sum_probs=27.0

Q ss_pred             ccccceecC----CCccccc-ccccc----CCceeEEEeCCC-CCCCCCc-HHHHHHH
Q 019093            8 PDDWHLHLR----DGDLLKA-VVPHS----VSHYGRAIVMPN-LKPPITT-TAAAVAY   54 (346)
Q Consensus         8 ~ID~HvH~r----~g~~~ke-~~~s~----sGGvTtvv~mPn-t~p~~~~-~~~~~~~   54 (346)
                      +||+|+|+=    +|..+.| ++.-.    .-|+|++|.-|. .+|.-.| .+.+..+
T Consensus         1 MIDIH~HIlp~iDDGp~s~eesl~ml~~A~~qGvt~iVaTsHh~~g~y~n~~~~v~~~   58 (254)
T COG4464           1 MIDIHSHILPDIDDGPKSLEESLAMLREAVRQGVTKIVATSHHLHGRYENPIEKVKEK   58 (254)
T ss_pred             CccccccccCCCCCCCCcHHHHHHHHHHHHHcCceEEeecccccCCccCChHHHHHHH
Confidence            599999973    2443332 33221    289999999984 3444443 3433333

>PF07969 Amidohydro_3: Amidohydrolase family; InterPro: IPR013108 Amidohydrolases are a diverse superfamily of enzymes which catalyse the hydrolysis of amide or amine bonds in a large number of different substrates including urea, cytosine, AMP, formylmethanofuran, etc [, ]

Probab=87.65  E-value=0.2  Score=48.98  Aligned_cols=15  Identities=27%  Similarity=0.208  Sum_probs=12.1

Q ss_pred             EEecCccccceecCC
Q 019093            3 LTLTQPDDWHLHLRD   17 (346)
Q Consensus         3 ~vlPG~ID~HvH~r~   17 (346)
                      +|+||+||.|+|+-.
T Consensus         1 ~v~PGfiD~H~H~~~   15 (404)
T PF07969_consen    1 TVMPGFIDSHTHLDS   15 (404)
T ss_dssp             EEEE-EEEEEEEHTT
T ss_pred             CCccChhHHhhChHH
Confidence            589999999999753

Also included in this superfamily are the phopshotriesterase enzymes, which hydrolyse P-O bonds. Members participate in a large number of processes including nucleotide metabolism, detoxification and neuronal development. They use a variety of divalent metal cofactors for catalysis: for example adenosine deaminase binds a single zinc ion, phopsphotriesterase binds two, while urease binds nickel. It has been postulated that since some of these proteins, such as those some of those involved in neuronal devlopment, appear to have lost their metal-binding centres, their function may simply be to bind, but not hydrolyse, their target molecules. This entry represents a subset of amidohydrolase domains that participate in different functions including cytosine degradation, atrazine degradation and other metabolic processes. The structure of the domain from Escherichia coli has been studied, and like other amidohydrolases it forms a classical alpha-beta TIM-barrel fold []. The active site is located in the mouth of the enzyme barrel and contains a bound iron ion that coordinates a hydroxyl nucleophile. Substrate binding involves a significant conformational change that sequesters the reaction complex from solvent.; PDB: 4F0R_A 4F0S_A 1V4Y_A 1M7J_A 1RK5_A 1RJP_A 1RJR_A 1RJQ_A 1RK6_A 1V51_A ....

>COG1735 Php Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]

Probab=87.53  E-value=6.4  Score=37.17  Aligned_cols=155  Identities=15%  Similarity=0.136  Sum_probs=82.5

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCC-CcEEEEccC-CHHHHHHHHccC--CCee
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQ-LKVVMEHIT-TMDAVKFVESCK--EGFV  192 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g-~~lhi~HvS-t~~~l~~i~~ak--g~~v  192 (346)
                      ..|+.+-+..+++|.|+.+|.+-..+  +   -|   ..+++   .++-.+ .++.|+|+. +.+-+.-.+..+  |..+
T Consensus       152 k~lrAaA~A~~~Tg~Pi~tHt~~gt~--g---~e---q~~il---~~egvdl~~v~igH~d~n~dd~~y~~~l~~~Ga~l  220 (316)
T COG1735         152 KSLRAAARAHKETGAPISTHTPAGTM--G---LE---QLRIL---AEEGVDLRKVSIGHMDPNTDDVYYQKKLADRGAFL  220 (316)
T ss_pred             HHHHHHHHHhhhcCCCeEEeccchhh--h---HH---HHHHH---HHcCCChhHeeEeccCCCCChHHHHHHHHhcCceE
Confidence            46677777778899999999986542  1   11   11222   233222 368999999 777777666655  4433


Q ss_pred             EEEccchhhccchhhhccCCCCCceEEeCCCCChhhHH-HHHHHHHcCCccEEeec-CCCCCCccccccCCC-CCCccch
Q 019093          193 AATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQ-AVVSAVTSGSRKFFLGT-DSAPHERGRKECACG-CAGIYNA  269 (346)
Q Consensus       193 t~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~-aL~~al~~G~Id~~i~S-DHaP~~~~~K~~~~~-~~G~~g~  269 (346)
                      ..+.              .|   .-+..|    .++|. .+.+-+.+|--|-+.-| |-+.....-+...-. ..|-.|.
T Consensus       221 ~fD~--------------iG---~d~y~p----d~~r~~~~~~l~~~gy~d~i~ls~d~~~~~~~~~~~~~~~~~~~~g~  279 (316)
T COG1735         221 EFDR--------------IG---KDKYYP----DEDRIAPLLELVARGYADLILLSHDDICLSDDVFLKSMLKANGGWGY  279 (316)
T ss_pred             Eecc--------------cC---ccccCc----HHHhhhhHHHHHHhhHhhheecccchhhhhhhHHHHhhhhhcCCccc
Confidence            2221              11   111222    45544 45556667776665666 333332222111100 1122233


Q ss_pred             hHHHHHHHHHHHhcC-CHHHHHHHHchhhhhhcCC
Q 019093          270 PVALSLYAKVFEEMG-ALDKLEAFTSFNGPDFYGL  303 (346)
Q Consensus       270 e~~lp~l~~~~~~~~-~l~~lv~~~s~nPAki~gl  303 (346)
                      -+.+--+.-.++++| +=+++-.++-.||+|+|..
T Consensus       280 ~~I~~~fIP~Lk~~Gvde~~i~~mlvdNP~r~f~~  314 (316)
T COG1735         280 GYILNDFIPRLKRHGVDEETIDTMLVDNPARLFTA  314 (316)
T ss_pred             chhhHhhHHHHHHcCCCHHHHHHHHhhCHHHHhcc
Confidence            233322222334454 6667888889999999975

>KOG4245 consensus Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]

Probab=86.00  E-value=5  Score=35.55  Aligned_cols=192  Identities=15%  Similarity=0.166  Sum_probs=96.9

Q ss_pred             HHHHHHHHH-cCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCC-----h------hhh
Q 019093           82 PDEIKLARK-TGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVD-----I------FDR  149 (346)
Q Consensus        82 ~~el~~l~~-~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~-----~------~~~  149 (346)
                      .+|+++.++ .| +.||.+=.  +  -....+ |. ..+..++..+.++.+.++||+=|...-.+     +      ..+
T Consensus        82 vee~~rcvk~lg-~~g~eigs--h--v~e~~l-d~-~d~~ply~~~e~l~~~lfvhpwdmhmwdgrl~kywlpwlvgmpa  154 (297)
T KOG4245|consen   82 VEEMERCVKELG-FKGFEIGS--H--VAEKDL-DA-QDFFPLYAAAEELKCSLFVHPWDMHMWDGRLAKYWLPWLVGMPA  154 (297)
T ss_pred             HHHHHHHHHHcC-CCceeecc--c--cccccC-ch-HHHhHHHHHHHhheeeEEecchhhcccccchHhhhhHHHhCCch
Confidence            457777774 56 67766521  0  011223 22 67888889999999999999988654221     0      234


Q ss_pred             HH-HHHHHHH-HHHHHhCCCCcEEEEccCCHHHHHHHHcc--CCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCC
Q 019093          150 EK-VFIDTIL-QPLIQRLPQLKVVMEHITTMDAVKFVESC--KEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKR  225 (346)
Q Consensus       150 E~-~av~~~l-~~~la~~~g~~lhi~HvSt~~~l~~i~~a--kg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~  225 (346)
                      |. .|+-+++ .-.+.+++..++-+.|-..  +.-.|+--  .|.++.-+.|..---+....+.     ..+...--.-+
T Consensus       155 eta~aics~img~i~~~fpklklcfahggg--a~p~~~grishg~n~rpdlca~~~~~~p~k~~-----g~~~tdalvhd  227 (297)
T KOG4245|consen  155 ETAIAICSMIMGGIFEKFPKLKLCFAHGGG--AFPFIRGRISHGFNMRPDLCAGDCKMAPKKLD-----GLFWTDALVHD  227 (297)
T ss_pred             HHHHHHHHHHHhhHHHhCchheeeeecCCc--ccceeeeeeccCccCCcchhcCcCCCChhhhc-----cchhhhhhhcC
Confidence            54 3554443 2236788999999999653  22222210  0223322222211111111111     11212222223


Q ss_pred             hhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHchhhhhhcCCCC
Q 019093          226 EIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLPR  305 (346)
Q Consensus       226 ~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~~~~l~~lv~~~s~nPAki~gl~~  305 (346)
                      +..-+-|++-+  |.=.+++|||. ||...|-+     +|- -+|.+=         .-+-++=-++...|.-+++++.+
T Consensus       228 p~alell~~ti--gkd~iilgtdy-pfplgele-----~gk-liee~~---------~f~a~~ke~l~~~nal~~l~id~  289 (297)
T KOG4245|consen  228 PKALELLIDTI--GKDHIILGTDY-PFPLGELE-----PGK-LIEEME---------EFDAEDKEDLKAGNALAFLDIDE  289 (297)
T ss_pred             cHHHHHHHHhh--ccceEEeccCC-CCcCcccc-----cch-HHHhhc---------ccchhhHHHhhhccchhhcccch
Confidence            34455566666  44445578886 87655533     120 011111         11233444556778888888754

>PTZ00372 endonuclease 4-like protein; Provisional

Probab=84.59  E-value=45  Score=33.14  Aligned_cols=124  Identities=14%  Similarity=0.046  Sum_probs=73.1

Q ss_pred             ccEEEEEEEEeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCC---cEEEecCCCCC
Q 019093           66 SNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNM---PLLVHGEVTDP  142 (346)
Q Consensus        66 vd~~~~~~~~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~---~v~vHaE~~~~  142 (346)
                      +-++.|+++  ..+ -..-+.+..+.| ..+|-+|+...-.-....+.+  ..+.+.-+.+++.|+   ++++|+-=. +
T Consensus       131 ~~iGaHvSi--aGG-~~~a~~~a~~~g-~~afqiF~~npr~w~~~~~~~--~~~~~f~~~~~~~gi~~~~i~~HapYl-I  203 (413)
T PTZ00372        131 VYIGAHVSA--SGG-VDNSPINAYNIA-GQAFALFLKNQRTWNSPPLSD--ETIDKFKENCKKYNYDPKFILPHGSYL-I  203 (413)
T ss_pred             ceEEEEEec--ccc-HHHHHHHHHHcC-CCEEEEEcCCCccCCCCCCCH--HHHHHHHHHHHHcCCCcceEEeecCce-e
Confidence            778888886  333 222345555668 589999974211111112333  566666667777765   377898732 2


Q ss_pred             CC---C--hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCC-------HHHHHHHHcc-------C-CCeeEEEccc
Q 019093          143 IV---D--IFDREKVFIDTILQPLIQRLPQLKVVMEHITT-------MDAVKFVESC-------K-EGFVAATVTP  198 (346)
Q Consensus       143 ~~---~--~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt-------~~~l~~i~~a-------k-g~~vt~Et~p  198 (346)
                      ..   +  .+..-...+.+.+  ..|...|++.++.|-.+       .++++.+.+.       . ++.+..|+++
T Consensus       204 NLASpd~e~rekSv~~~~~eL--~rA~~LGa~~VV~HPGs~~~~~~~ee~i~~i~e~L~~~la~~~gV~IlLENma  277 (413)
T PTZ00372        204 NLANPDKEKREKSYDAFLDDL--QRCEQLGIKLYNFHPGSTVGQCSKEEGIKNIADCINKAHEETKSVIIVLENTA  277 (413)
T ss_pred             cCCCCCHHHHHHHHHHHHHHH--HHHHHcCCCEEEECCCcCCCCCCHHHHHHHHHHHHHHHHhCcCCCEEEEecCC
Confidence            21   1  1222234555667  68999999999999876       4455554432       2 4667777655

>COG1229 FwdA Formylmethanofuran dehydrogenase subunit A [Energy production and conversion]

Probab=84.53  E-value=0.86  Score=44.50  Aligned_cols=53  Identities=21%  Similarity=0.248  Sum_probs=39.8

Q ss_pred             CHHHHHHHHchhhhhhcCCCC-C-------CccEEEEe-cceeecCCc-------cccCCcccccCCCcE
Q 019093          285 ALDKLEAFTSFNGPDFYGLPR-N-------TSKIKLTK-IPWKVPEAF-------SFSFGDIIPMFAGNT  338 (346)
Q Consensus       285 ~l~~lv~~~s~nPAki~gl~~-k-------dAdlvi~d-~~~~v~~~~-------~~s~~~~sp~~~G~~  338 (346)
                      ++.++..++-.||||.+||+. |       ||||.|.| .+-.|+.++       -++++.|+.- +|..
T Consensus       439 t~~eia~~TRa~~ak~lgl~e~kGhLg~GadadIaiYdlnP~~vDps~dye~v~kaf~~A~ytlK-~GeI  507 (575)
T COG1229         439 TLYELAIMTRANPAKVLGLSERKGHLGVGADADIAIYDLNPEQVDPSNDYEKVEKAFRKAAYTLK-GGEI  507 (575)
T ss_pred             cHHHHHHHHhcChhhhcccccccCccCcCccCceEEEecChhhcCCcccHHHHHHHHhheeEEec-CceE
Confidence            578999999999999999964 4       99999999 777776432       2445666665 3543

>KOG3892 consensus N-acetyl-glucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism]

Probab=84.33  E-value=1.1  Score=41.57  Aligned_cols=49  Identities=10%  Similarity=0.249  Sum_probs=36.3

Q ss_pred             HHHHHHH-HHhcC-CHHHHHHHHchhhhhhcCC-CCC-------CccEEEEecceeecC
Q 019093          273 LSLYAKV-FEEMG-ALDKLEAFTSFNGPDFYGL-PRN-------TSKIKLTKIPWKVPE  321 (346)
Q Consensus       273 lp~l~~~-~~~~~-~l~~lv~~~s~nPAki~gl-~~k-------dAdlvi~d~~~~v~~  321 (346)
                      |+..... .+..+ +++-..+..+-.||+++|+ +.|       |||||++|..-+|.+
T Consensus       336 Md~CvRhf~kATgCs~e~AleaAtlhPAqlLg~ek~KGTLDfG~dADFVllDd~l~V~a  394 (407)
T KOG3892|consen  336 MDVCVRHFLKATGCSMESALEAATLHPAQLLGLEKSKGTLDFGADADFVLLDDSLHVQA  394 (407)
T ss_pred             cHHHHHHHHHhcCCcHHHHHhhhccChHHhhccccccccccccccCceEEEccceEEEE
Confidence            4444333 33356 7999999999999999999 455       899999996666654

>cd01300 YtcJ_like YtcJ_like metal dependent amidohydrolases

Probab=84.22  E-value=0.4  Score=48.26  Aligned_cols=16  Identities=31%  Similarity=0.096  Sum_probs=14.1

Q ss_pred             eEEecCccccceecCC
Q 019093            2 ELTLTQPDDWHLHLRD   17 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~   17 (346)
                      ++|+||+||.|+|+..
T Consensus        34 ~~~~PGfiD~H~H~~~   49 (479)
T cd01300          34 KTVLPGFIDSHSHLLL   49 (479)
T ss_pred             CEEccCcccccccchh
Confidence            5799999999999854

YtcJ is a Bacillus subtilis ORF of unknown function. The Arabidopsis homolog LAF3 has been identified as a factor required for photochrome A signalling.

>TIGR01430 aden_deam adenosine deaminase

Probab=83.90  E-value=36  Score=32.23  Aligned_cols=67  Identities=13%  Similarity=0.016  Sum_probs=41.4

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCc--EEEEccC-CHHHHHHHHccCCCeeE
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLK--VVMEHIT-TMDAVKFVESCKEGFVA  193 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~--lhi~HvS-t~~~l~~i~~akg~~vt  193 (346)
                      ..+.++++.+++.|+++.+|+....-   .  .+   +...+     ...|+.  .|-.+++ +.+.++++++.   .+.
T Consensus       172 ~~~~~~~~~A~~~g~~i~~Ha~E~~~---~--~~---~~~~~-----~~~g~~ri~Hg~~l~~~~~~i~~l~~~---gi~  235 (324)
T TIGR01430       172 PDFVRAFAIARELGLHLTVHAGELGG---P--ES---VREAL-----DDLGATRIGHGVRALEDPELLKRLAQE---NIT  235 (324)
T ss_pred             HHHHHHHHHHHHCCCCeEEecCCCCC---h--HH---HHHHH-----HHcCchhcchhhhhccCHHHHHHHHHc---Cce
Confidence            67889999999999999999975311   0  01   11111     111322  2333443 35678888764   588


Q ss_pred             EEccch
Q 019093          194 ATVTPQ  199 (346)
Q Consensus       194 ~Et~ph  199 (346)
                      +|+||.
T Consensus       236 v~~cP~  241 (324)
T TIGR01430       236 LEVCPT  241 (324)
T ss_pred             EEECCc
Confidence            899994

This family includes the experimentally verified adenosine deaminases of mammals and E. coli. Other members of this family are predicted also to be adenosine deaminase, an enzyme of nucleotide degradation. This family is distantly related to AMP deaminase.

>PRK01060 endonuclease IV; Provisional

Probab=81.42  E-value=44  Score=30.73  Aligned_cols=111  Identities=9%  Similarity=0.043  Sum_probs=62.5

Q ss_pred             HHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCc---EEEecCCC-CCCC-Ch--hhhHHHHHHH
Q 019093           84 EIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMP---LLVHGEVT-DPIV-DI--FDREKVFIDT  156 (346)
Q Consensus        84 el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~---v~vHaE~~-~~~~-~~--~~~E~~av~~  156 (346)
                      -+..+.+.| .-++.+|+........... +. ..+.++-+.+++.|+.   +.+|+--. .+.. +.  .......+.+
T Consensus        17 ~l~~~~~~G-~d~vEl~~~~p~~~~~~~~-~~-~~~~~lk~~~~~~gl~~~~~~~h~~~~~nl~~~d~~~r~~s~~~~~~   93 (281)
T PRK01060         17 AVAEAAEIG-ANAFMIFTGNPQQWKRKPL-EE-LNIEAFKAACEKYGISPEDILVHAPYLINLGNPNKEILEKSRDFLIQ   93 (281)
T ss_pred             HHHHHHHcC-CCEEEEECCCCCCCcCCCC-CH-HHHHHHHHHHHHcCCCCCceEEecceEecCCCCCHHHHHHHHHHHHH
Confidence            456666778 7899988742111111112 22 4555555667777876   77787421 1111 11  2233345666


Q ss_pred             HHHHHHHhCCCCcEEEEccCCH------H-HHH-------HHH-ccCCCeeEEEccch
Q 019093          157 ILQPLIQRLPQLKVVMEHITTM------D-AVK-------FVE-SCKEGFVAATVTPQ  199 (346)
Q Consensus       157 ~l~~~la~~~g~~lhi~HvSt~------~-~l~-------~i~-~akg~~vt~Et~ph  199 (346)
                      .+  .+|+..|++..+.|....      + +.+       .+. ++.|+.+..|+.|.
T Consensus        94 ~i--~~A~~lga~~vv~h~G~~~~~~~~~~~~~~~~e~l~~l~~~~~gv~l~iEn~~~  149 (281)
T PRK01060         94 EI--ERCAALGAKLLVFHPGSHLGDIDEEDCLARIAESLNEALDKTQGVTIVLENTAG  149 (281)
T ss_pred             HH--HHHHHcCCCEEEEcCCcCCCCCcHHHHHHHHHHHHHHHHhcCCCCEEEEecCCC
Confidence            67  688889999888887631      2 222       221 12278888998764

>COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]

Probab=80.42  E-value=0.51  Score=48.26  Aligned_cols=16  Identities=38%  Similarity=0.393  Sum_probs=14.4

Q ss_pred             eEEecCccccceecCC
Q 019093            2 ELTLTQPDDWHLHLRD   17 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~   17 (346)
                      ++|+||+||.|.|+-.
T Consensus        59 k~v~PGfvDaH~Hl~~   74 (535)
T COG1574          59 KFVLPGFVDAHLHLIS   74 (535)
T ss_pred             CEeccccchhhHHHHH
Confidence            5899999999999865

>PF03102 NeuB: NeuB family; InterPro: IPR013132 NeuB is the prokaryotic N-acetylneuraminic acid synthase (Neu5Ac)

Probab=80.37  E-value=22  Score=32.63  Aligned_cols=73  Identities=16%  Similarity=0.354  Sum_probs=39.2

Q ss_pred             CHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHH
Q 019093           81 SPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQP  160 (346)
Q Consensus        81 ~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~  160 (346)
                      ..+.+..|.+.| +..+||=     |.   -+.+     ..+++++++.|+|+++-..-..+      .|   |.+.+. 
T Consensus        78 d~~s~d~l~~~~-~~~~KIa-----S~---dl~n-----~~lL~~~A~tgkPvIlSTG~stl------~E---I~~Av~-  133 (241)
T PF03102_consen   78 DEESVDFLEELG-VPAYKIA-----SG---DLTN-----LPLLEYIAKTGKPVILSTGMSTL------EE---IERAVE-  133 (241)
T ss_dssp             SHHHHHHHHHHT--SEEEE------GG---GTT------HHHHHHHHTT-S-EEEE-TT--H------HH---HHHHHH-
T ss_pred             CHHHHHHHHHcC-CCEEEec-----cc---cccC-----HHHHHHHHHhCCcEEEECCCCCH------HH---HHHHHH-
Confidence            345565666668 8999983     21   1223     46788899999999987775433      33   344442 


Q ss_pred             HHHhCCCCcEEEEccCC
Q 019093          161 LIQRLPQLKVVMEHITT  177 (346)
Q Consensus       161 ~la~~~g~~lhi~HvSt  177 (346)
                      .+.+..+.++.+.|+.|
T Consensus       134 ~~~~~~~~~l~llHC~s  150 (241)
T PF03102_consen  134 VLREAGNEDLVLLHCVS  150 (241)
T ss_dssp             HHHHHCT--EEEEEE-S
T ss_pred             HHHhcCCCCEEEEecCC
Confidence            23355677888888875

It catalyses the direct formation of Neu5Ac (the most common sialic acid) by condensation of phosphoenolpyruvate (PEP) and N-acetylmannosamine (ManNAc). This reaction has only been observed in prokaryotes; eukaryotes synthesise the 9-phosphate form, Neu5Ac-9-P, and utilise ManNAc-6-P instead of ManNAc. Such eukaryotic enzymes are not present in this family []. This family also contains SpsE spore coat polysaccharide biosynthesis proteins.; GO: 0016051 carbohydrate biosynthetic process; PDB: 3G8R_B 1XUU_A 1XUZ_A 3CM4_A 2ZDR_A 1VLI_A 2WQP_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	346
3mjm_A	347	His257ala Mutant Of Dihydroorotase From E. Coli Len		1e-105
1j79_A	347	Molecular Structure Of Dihydroorotase: A Paradigm F		1e-105
1xge_A	347	Dihydroorotase From Escherichia Coli: Loop Movement		1e-105
2z24_A	347	Thr110ser Dihydroorotase From E. Coli Length = 347		1e-105
2e25_A	347	The Crystal Structure Of The T109s Mutant Of E. Col		1e-105
2z28_A	347	Thr109val Dihydroorotase From E. Coli Length = 347		1e-105
2z25_A	347	Thr110val Dihydroorotase From E. Coli Length = 347		1e-105
2z29_A	347	Thr109ala Dihydroorotase From E. Coli Length = 347		1e-105
2z26_A	347	Thr110ala Dihydroorotase From E. Coli Length = 347		1e-105
2z2a_A	347	Thr109gly Dihydroorotase From E. Coli Length = 347		1e-104
3jze_A	372	1.8 Angstrom Resolution Crystal Structure Of Dihydr		1e-104
2z2b_A	337	Deletion 107-116 Mutant Of Dihydroorotase From E. C		1e-100
3pnu_A	359	2.4 Angstrom Crystal Structure Of Dihydroorotase (P		9e-55

>pdb|3MJM|A Chain A, His257ala Mutant Of Dihydroorotase From E. Coli Length = 347

Iteration: 1
 Score =  379 bits (973), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 188/339 (55%), Positives = 229/339 (67%), Gaps = 2/339 (0%)
Query: 3   LTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKAL 62
           L + +PDDWHLHLRDGD+LK VVP++   YGRAIVMPNL PP+TT  AAVAYR+ IL A+
Sbjct: 7   LKIRRPDDWHLHLRDGDMLKTVVPYTSEIYGRAIVMPNLAPPVTTVEAAVAYRQRILDAV 66
Query: 63  PASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHV 122
           PA  +FTPLMT YLTD+  P+E++     GV  A  LYPA ATTNS  GVT +    + V
Sbjct: 67  PAGHDFTPLMTCYLTDSLDPNELERGFNEGVFTAAXLYPANATTNSSHGVTSV-DAIMPV 125
Query: 123 LEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTXXXXXXXXXXXXKVVMEHITTMDAVK 182
           LE M +  MPLLVHGEVT   +DIFDRE  FI++            KVV EHITT DA  
Sbjct: 126 LERMEKIGMPLLVHGEVTHADIDIFDREARFIESVMEPLRQRLTALKVVFEHITTKDAAD 185
Query: 183 FVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRK 242
           +V    E  +AAT+TPQHL+ NRN +  GG+RPH YCLP+LKR IH+QA+   V SG  +
Sbjct: 186 YVRDGNER-LAATITPQHLMFNRNHMLVGGVRPHLYCLPILKRNIHQQALRELVASGFNR 244
Query: 243 FFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYG 302
            FLGTDSAPH R RKE +CGCAG +NAP AL  YA VFEEM AL   EAF S NGP FYG
Sbjct: 245 VFLGTDSAPHARARKESSCGCAGCFNAPTALGSYATVFEEMNALQHFEAFCSVNGPQFYG 304
Query: 303 LPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEW 341
           LP N + I+L +   +V E+ + +   ++P  AG T+ W
Sbjct: 305 LPVNDTFIELVREEQQVAESIALTDDTLVPFLAGETVRW 343

>pdb|1J79|A Chain A, Molecular Structure Of Dihydroorotase: A Paradigm For Catalysis Through The Use Of A Binuclear Metal Center Length = 347

Iteration: 1
 Score =  378 bits (971), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 188/339 (55%), Positives = 230/339 (67%), Gaps = 2/339 (0%)
Query: 3   LTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKAL 62
           L + +PDDWHLHLRDGD+LK VVP++   YGRAIVMPNL PP+TT  AAVAYR+ IL A+
Sbjct: 7   LKIRRPDDWHLHLRDGDMLKTVVPYTSEIYGRAIVMPNLAPPVTTVEAAVAYRQRILDAV 66
Query: 63  PASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHV 122
           PA  +FTPLMT YLTD+  P+E++     GV  A  LYPA ATTNS  GVT +    + V
Sbjct: 67  PAPHDFTPLMTCYLTDSLDPNELERGFNEGVFTAAXLYPANATTNSSHGVTSV-DAIMPV 125
Query: 123 LEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTXXXXXXXXXXXXKVVMEHITTMDAVK 182
           LE M +  MPLLVHGEVT   +DIFDRE  FI++            KVV EHITT DA  
Sbjct: 126 LERMEKIGMPLLVHGEVTHADIDIFDREARFIESVMEPLRQRLTALKVVFEHITTKDAAD 185
Query: 183 FVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRK 242
           +V    E  +AAT+TPQHL+ NRN +  GG+RPH YCLP+LKR IH+QA+   V SG ++
Sbjct: 186 YVRDGNER-LAATITPQHLMFNRNHMLVGGVRPHLYCLPILKRNIHQQALRELVASGFQR 244
Query: 243 FFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYG 302
            FLGTDSAPH R RKE +CGCAG +NAP AL  YA VFEEM AL   EAF S NGP FYG
Sbjct: 245 VFLGTDSAPHARHRKESSCGCAGCFNAPTALGSYATVFEEMNALQHFEAFCSVNGPQFYG 304
Query: 303 LPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEW 341
           LP N + I+L +   +V E+ + +   ++P  AG T+ W
Sbjct: 305 LPVNDTFIELVREEQQVAESIALTDDTLVPFLAGETVRW 343

>pdb|1XGE|A Chain A, Dihydroorotase From Escherichia Coli: Loop Movement And Cooperativity Between Subunits Length = 347

Iteration: 1
 Score =  378 bits (971), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 188/339 (55%), Positives = 229/339 (67%), Gaps = 2/339 (0%)
Query: 3   LTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKAL 62
           L + +PDDWHLHLRDGD+LK VVP++   YGRAIVMPNL PP+TT  AAVAYR+ IL A+
Sbjct: 7   LKIRRPDDWHLHLRDGDMLKTVVPYTSEIYGRAIVMPNLAPPVTTVEAAVAYRQRILDAV 66
Query: 63  PASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHV 122
           PA  +FTPLMT YLTD+  P+E++     GV  A  LYPA ATTNS  GVT +    + V
Sbjct: 67  PAGHDFTPLMTCYLTDSLDPNELERGFNEGVFTAAXLYPANATTNSSHGVTSV-DAIMPV 125
Query: 123 LEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTXXXXXXXXXXXXKVVMEHITTMDAVK 182
           LE M +  MPLLVHGEVT   +DIFDRE  FI++            KVV EHITT DA  
Sbjct: 126 LERMEKIGMPLLVHGEVTHADIDIFDREARFIESVMEPLRQRLTALKVVFEHITTKDAAD 185
Query: 183 FVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRK 242
           +V    E  +AAT+TPQHL+ NRN +  GG+RPH YCLP+LKR IH+QA+   V SG  +
Sbjct: 186 YVRDGNER-LAATITPQHLMFNRNHMLVGGVRPHLYCLPILKRNIHQQALRELVASGFNR 244
Query: 243 FFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYG 302
            FLGTDSAPH R RKE +CGCAG +NAP AL  YA VFEEM AL   EAF S NGP FYG
Sbjct: 245 VFLGTDSAPHARHRKESSCGCAGCFNAPTALGSYATVFEEMNALQHFEAFCSVNGPQFYG 304
Query: 303 LPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEW 341
           LP N + I+L +   +V E+ + +   ++P  AG T+ W
Sbjct: 305 LPVNDTFIELVREEQQVAESIALTDDTLVPFLAGETVRW 343

>pdb|2Z24|A Chain A, Thr110ser Dihydroorotase From E. Coli Length = 347

Iteration: 1
 Score =  377 bits (969), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 187/339 (55%), Positives = 229/339 (67%), Gaps = 2/339 (0%)
Query: 3   LTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKAL 62
           L + +PDDWHLHLRDGD+LK VVP++   YGRAIVMPNL PP+TT  AAVAYR+ IL A+
Sbjct: 7   LKIRRPDDWHLHLRDGDMLKTVVPYTSEIYGRAIVMPNLAPPVTTVEAAVAYRQRILDAV 66
Query: 63  PASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHV 122
           PA  +FTPLMT YLTD+  P+E++     GV  A  LYPA AT+NS  GVT +    + V
Sbjct: 67  PAGHDFTPLMTCYLTDSLDPNELERGFNEGVFTAAXLYPANATSNSSHGVTSV-DAIMPV 125
Query: 123 LEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTXXXXXXXXXXXXKVVMEHITTMDAVK 182
           LE M +  MPLLVHGEVT   +DIFDRE  FI++            KVV EHITT DA  
Sbjct: 126 LERMEKIGMPLLVHGEVTHADIDIFDREARFIESVMEPLRQRLTALKVVFEHITTKDAAD 185
Query: 183 FVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRK 242
           +V    E  +AAT+TPQHL+ NRN +  GG+RPH YCLP+LKR IH+QA+   V SG  +
Sbjct: 186 YVRDGNER-LAATITPQHLMFNRNHMLVGGVRPHLYCLPILKRNIHQQALRELVASGFNR 244
Query: 243 FFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYG 302
            FLGTDSAPH R RKE +CGCAG +NAP AL  YA VFEEM AL   EAF S NGP FYG
Sbjct: 245 VFLGTDSAPHARHRKESSCGCAGCFNAPTALGSYATVFEEMNALQHFEAFCSVNGPQFYG 304
Query: 303 LPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEW 341
           LP N + I+L +   +V E+ + +   ++P  AG T+ W
Sbjct: 305 LPVNDTFIELVREEQQVAESIALTDDTLVPFLAGETVRW 343

>pdb|2E25|A Chain A, The Crystal Structure Of The T109s Mutant Of E. Coli Dihydroorotase Complexed With An Inhibitor 5-fluoroorotate Length = 347

Iteration: 1
 Score =  377 bits (969), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 187/339 (55%), Positives = 229/339 (67%), Gaps = 2/339 (0%)
Query: 3   LTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKAL 62
           L + +PDDWHLHLRDGD+LK VVP++   YGRAIVMPNL PP+TT  AAVAYR+ IL A+
Sbjct: 7   LKIRRPDDWHLHLRDGDMLKTVVPYTSEIYGRAIVMPNLAPPVTTVEAAVAYRQRILDAV 66
Query: 63  PASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHV 122
           PA  +FTPLMT YLTD+  P+E++     GV  A  LYPA A+TNS  GVT +    + V
Sbjct: 67  PAGHDFTPLMTCYLTDSLDPNELERGFNEGVFTAAXLYPANASTNSSHGVTSV-DAIMPV 125
Query: 123 LEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTXXXXXXXXXXXXKVVMEHITTMDAVK 182
           LE M +  MPLLVHGEVT   +DIFDRE  FI++            KVV EHITT DA  
Sbjct: 126 LERMEKIGMPLLVHGEVTHADIDIFDREARFIESVMEPLRQRLTALKVVFEHITTKDAAD 185
Query: 183 FVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRK 242
           +V    E  +AAT+TPQHL+ NRN +  GG+RPH YCLP+LKR IH+QA+   V SG  +
Sbjct: 186 YVRDGNER-LAATITPQHLMFNRNHMLVGGVRPHLYCLPILKRNIHQQALRELVASGFNR 244
Query: 243 FFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYG 302
            FLGTDSAPH R RKE +CGCAG +NAP AL  YA VFEEM AL   EAF S NGP FYG
Sbjct: 245 VFLGTDSAPHARHRKESSCGCAGCFNAPTALGSYATVFEEMNALQHFEAFCSVNGPQFYG 304
Query: 303 LPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEW 341
           LP N + I+L +   +V E+ + +   ++P  AG T+ W
Sbjct: 305 LPVNDTFIELVREEQQVAESIALTDDTLVPFLAGETVRW 343

>pdb|2Z28|A Chain A, Thr109val Dihydroorotase From E. Coli Length = 347

Iteration: 1
 Score =  377 bits (967), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 187/339 (55%), Positives = 228/339 (67%), Gaps = 2/339 (0%)
Query: 3   LTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKAL 62
           L + +PDDWHLHLRDGD+LK VVP++   YGRAIVMPNL PP+TT  AAVAYR+ IL A+
Sbjct: 7   LKIRRPDDWHLHLRDGDMLKTVVPYTSEIYGRAIVMPNLAPPVTTVEAAVAYRQRILDAV 66
Query: 63  PASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHV 122
           PA  +FTPLMT YLTD+  P+E++     GV  A  LYPA A TNS  GVT +    + V
Sbjct: 67  PAGHDFTPLMTCYLTDSLDPNELERGFNEGVFTAAXLYPANAVTNSSHGVTSV-DAIMPV 125
Query: 123 LEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTXXXXXXXXXXXXKVVMEHITTMDAVK 182
           LE M +  MPLLVHGEVT   +DIFDRE  FI++            KVV EHITT DA  
Sbjct: 126 LERMEKIGMPLLVHGEVTHADIDIFDREARFIESVMEPLRQRLTALKVVFEHITTKDAAD 185
Query: 183 FVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRK 242
           +V    E  +AAT+TPQHL+ NRN +  GG+RPH YCLP+LKR IH+QA+   V SG  +
Sbjct: 186 YVRDGNER-LAATITPQHLMFNRNHMLVGGVRPHLYCLPILKRNIHQQALRELVASGFNR 244
Query: 243 FFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYG 302
            FLGTDSAPH R RKE +CGCAG +NAP AL  YA VFEEM AL   EAF S NGP FYG
Sbjct: 245 VFLGTDSAPHARHRKESSCGCAGCFNAPTALGSYATVFEEMNALQHFEAFCSVNGPQFYG 304
Query: 303 LPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEW 341
           LP N + I+L +   +V E+ + +   ++P  AG T+ W
Sbjct: 305 LPVNDTFIELVREEQQVAESIALTDDTLVPFLAGETVRW 343

>pdb|2Z25|A Chain A, Thr110val Dihydroorotase From E. Coli Length = 347

Iteration: 1
 Score =  377 bits (967), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 187/339 (55%), Positives = 228/339 (67%), Gaps = 2/339 (0%)
Query: 3   LTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKAL 62
           L + +PDDWHLHLRDGD+LK VVP++   YGRAIVMPNL PP+TT  AAVAYR+ IL A+
Sbjct: 7   LKIRRPDDWHLHLRDGDMLKTVVPYTSEIYGRAIVMPNLAPPVTTVEAAVAYRQRILDAV 66
Query: 63  PASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHV 122
           PA  +FTPLMT YLTD+  P+E++     GV  A  LYPA AT NS  GVT +    + V
Sbjct: 67  PAGHDFTPLMTCYLTDSLDPNELERGFNEGVFTAAXLYPANATVNSSHGVTSV-DAIMPV 125
Query: 123 LEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTXXXXXXXXXXXXKVVMEHITTMDAVK 182
           LE M +  MPLLVHGEVT   +DIFDRE  FI++            KVV EHITT DA  
Sbjct: 126 LERMEKIGMPLLVHGEVTHADIDIFDREARFIESVMEPLRQRLTALKVVFEHITTKDAAD 185
Query: 183 FVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRK 242
           +V    E  +AAT+TPQHL+ NRN +  GG+RPH YCLP+LKR IH+QA+   V SG  +
Sbjct: 186 YVRDGNER-LAATITPQHLMFNRNHMLVGGVRPHLYCLPILKRNIHQQALRELVASGFNR 244
Query: 243 FFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYG 302
            FLGTDSAPH R RKE +CGCAG +NAP AL  YA VFEEM AL   EAF S NGP FYG
Sbjct: 245 VFLGTDSAPHARHRKESSCGCAGCFNAPTALGSYATVFEEMNALQHFEAFCSVNGPQFYG 304
Query: 303 LPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEW 341
           LP N + I+L +   +V E+ + +   ++P  AG T+ W
Sbjct: 305 LPVNDTFIELVREEQQVAESIALTDDTLVPFLAGETVRW 343

>pdb|2Z29|A Chain A, Thr109ala Dihydroorotase From E. Coli Length = 347

Iteration: 1
 Score =  377 bits (967), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 187/339 (55%), Positives = 228/339 (67%), Gaps = 2/339 (0%)
Query: 3   LTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKAL 62
           L + +PDDWHLHLRDGD+LK VVP++   YGRAIVMPNL PP+TT  AAVAYR+ IL A+
Sbjct: 7   LKIRRPDDWHLHLRDGDMLKTVVPYTSEIYGRAIVMPNLAPPVTTVEAAVAYRQRILDAV 66
Query: 63  PASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHV 122
           PA  +FTPLMT YLTD+  P+E++     GV  A  LYPA A TNS  GVT +    + V
Sbjct: 67  PAGHDFTPLMTCYLTDSLDPNELERGFNEGVFTAAXLYPANAATNSSHGVTSV-DAIMPV 125
Query: 123 LEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTXXXXXXXXXXXXKVVMEHITTMDAVK 182
           LE M +  MPLLVHGEVT   +DIFDRE  FI++            KVV EHITT DA  
Sbjct: 126 LERMEKIGMPLLVHGEVTHADIDIFDREARFIESVMEPLRQRLTALKVVFEHITTKDAAD 185
Query: 183 FVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRK 242
           +V    E  +AAT+TPQHL+ NRN +  GG+RPH YCLP+LKR IH+QA+   V SG  +
Sbjct: 186 YVRDGNER-LAATITPQHLMFNRNHMLVGGVRPHLYCLPILKRNIHQQALRELVASGFNR 244
Query: 243 FFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYG 302
            FLGTDSAPH R RKE +CGCAG +NAP AL  YA VFEEM AL   EAF S NGP FYG
Sbjct: 245 VFLGTDSAPHARHRKESSCGCAGCFNAPTALGSYATVFEEMNALQHFEAFCSVNGPQFYG 304
Query: 303 LPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEW 341
           LP N + I+L +   +V E+ + +   ++P  AG T+ W
Sbjct: 305 LPVNDTFIELVREEQQVAESIALTDDTLVPFLAGETVRW 343

>pdb|2Z26|A Chain A, Thr110ala Dihydroorotase From E. Coli Length = 347

Iteration: 1
 Score =  377 bits (967), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 187/339 (55%), Positives = 228/339 (67%), Gaps = 2/339 (0%)
Query: 3   LTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKAL 62
           L + +PDDWHLHLRDGD+LK VVP++   YGRAIVMPNL PP+TT  AAVAYR+ IL A+
Sbjct: 7   LKIRRPDDWHLHLRDGDMLKTVVPYTSEIYGRAIVMPNLAPPVTTVEAAVAYRQRILDAV 66
Query: 63  PASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHV 122
           PA  +FTPLMT YLTD+  P+E++     GV  A  LYPA AT NS  GVT +    + V
Sbjct: 67  PAGHDFTPLMTCYLTDSLDPNELERGFNEGVFTAAXLYPANATANSSHGVTSV-DAIMPV 125
Query: 123 LEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTXXXXXXXXXXXXKVVMEHITTMDAVK 182
           LE M +  MPLLVHGEVT   +DIFDRE  FI++            KVV EHITT DA  
Sbjct: 126 LERMEKIGMPLLVHGEVTHADIDIFDREARFIESVMEPLRQRLTALKVVFEHITTKDAAD 185
Query: 183 FVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRK 242
           +V    E  +AAT+TPQHL+ NRN +  GG+RPH YCLP+LKR IH+QA+   V SG  +
Sbjct: 186 YVRDGNER-LAATITPQHLMFNRNHMLVGGVRPHLYCLPILKRNIHQQALRELVASGFNR 244
Query: 243 FFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYG 302
            FLGTDSAPH R RKE +CGCAG +NAP AL  YA VFEEM AL   EAF S NGP FYG
Sbjct: 245 VFLGTDSAPHARHRKESSCGCAGCFNAPTALGSYATVFEEMNALQHFEAFCSVNGPQFYG 304
Query: 303 LPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEW 341
           LP N + I+L +   +V E+ + +   ++P  AG T+ W
Sbjct: 305 LPVNDTFIELVREEQQVAESIALTDDTLVPFLAGETVRW 343

>pdb|2Z2A|A Chain A, Thr109gly Dihydroorotase From E. Coli Length = 347

Iteration: 1
 Score =  376 bits (965), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 187/339 (55%), Positives = 228/339 (67%), Gaps = 2/339 (0%)
Query: 3   LTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKAL 62
           L + +PDDWHLHLRDGD+LK VVP++   YGRAIVMPNL PP+TT  AAVAYR+ IL A+
Sbjct: 7   LKIRRPDDWHLHLRDGDMLKTVVPYTSEIYGRAIVMPNLAPPVTTVEAAVAYRQRILDAV 66
Query: 63  PASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHV 122
           PA  +FTPLMT YLTD+  P+E++     GV  A  LYPA A TNS  GVT +    + V
Sbjct: 67  PAGHDFTPLMTCYLTDSLDPNELERGFNEGVFTAAXLYPANAGTNSSHGVTSV-DAIMPV 125
Query: 123 LEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTXXXXXXXXXXXXKVVMEHITTMDAVK 182
           LE M +  MPLLVHGEVT   +DIFDRE  FI++            KVV EHITT DA  
Sbjct: 126 LERMEKIGMPLLVHGEVTHADIDIFDREARFIESVMEPLRQRLTALKVVFEHITTKDAAD 185
Query: 183 FVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRK 242
           +V    E  +AAT+TPQHL+ NRN +  GG+RPH YCLP+LKR IH+QA+   V SG  +
Sbjct: 186 YVRDGNER-LAATITPQHLMFNRNHMLVGGVRPHLYCLPILKRNIHQQALRELVASGFNR 244
Query: 243 FFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYG 302
            FLGTDSAPH R RKE +CGCAG +NAP AL  YA VFEEM AL   EAF S NGP FYG
Sbjct: 245 VFLGTDSAPHARHRKESSCGCAGCFNAPTALGSYATVFEEMNALQHFEAFCSVNGPQFYG 304
Query: 303 LPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEW 341
           LP N + I+L +   +V E+ + +   ++P  AG T+ W
Sbjct: 305 LPVNDTFIELVREEQQVAESIALTDDTLVPFLAGETVRW 343

>pdb|3JZE|A Chain A, 1.8 Angstrom Resolution Crystal Structure Of Dihydroorotase (Pyrc) From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 Length = 372

Iteration: 1
 Score =  375 bits (964), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 186/339 (54%), Positives = 228/339 (67%), Gaps = 2/339 (0%)
Query: 3   LTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKAL 62
           L + +PDDWH+HLRDGD+LK VVP++   YGRAIVMPNL  PITT  AA+AYR+ IL A+
Sbjct: 32  LKIRRPDDWHVHLRDGDMLKTVVPYTSEIYGRAIVMPNLASPITTVDAAIAYRQRILDAV 91
Query: 63  PASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHV 122
           PA  +FTPLMT YLTD+   DE++     GV  A  LYPA ATTNS  GVT +    + V
Sbjct: 92  PAGHDFTPLMTCYLTDSLDADELERGFHEGVFTAAXLYPANATTNSSHGVTSV-DAIMPV 150
Query: 123 LEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTXXXXXXXXXXXXKVVMEHITTMDAVK 182
           LE M +  +PLLVHGEVT   VDIFDRE  FIDT            KVV EHITT DA +
Sbjct: 151 LERMEKLGIPLLVHGEVTHADVDIFDREARFIDTVMEPLRQRLTALKVVFEHITTKDAAQ 210
Query: 183 FVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRK 242
           +V    + ++AAT+TPQHL+ NRN +  GG+RPH YCLP+LKR IH+QA+   V SG  +
Sbjct: 211 YVRDGND-YLAATITPQHLMFNRNDMLVGGIRPHLYCLPILKRNIHQQALRELVASGFTR 269
Query: 243 FFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYG 302
            FLGTDSAPH R RKE +CGCAG +NAP AL  YA VFEEM AL   EAF S NGP FYG
Sbjct: 270 AFLGTDSAPHSRHRKETSCGCAGCFNAPSALGSYAAVFEEMNALAHFEAFCSLNGPQFYG 329
Query: 303 LPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEW 341
           LP NT  ++L +   ++P   + +   ++P  AG T+ W
Sbjct: 330 LPMNTGWVELVRDEQQIPGNIALADDSLVPFLAGETVRW 368

>pdb|2Z2B|A Chain A, Deletion 107-116 Mutant Of Dihydroorotase From E. Coli Length = 337

Iteration: 1
 Score =  361 bits (926), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 182/339 (53%), Positives = 223/339 (65%), Gaps = 12/339 (3%)
Query: 3   LTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKAL 62
           L + +PDDWHLHLRDGD+LK VVP++   YGRAIVMPNL PP+TT  AAVAYR+ IL A+
Sbjct: 7   LKIRRPDDWHLHLRDGDMLKTVVPYTSEIYGRAIVMPNLAPPVTTVEAAVAYRQRILDAV 66
Query: 63  PASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHV 122
           PA  +FTPLMT YLTD+  P+E++     GV  A  LYPA     S D +       + V
Sbjct: 67  PAGHDFTPLMTCYLTDSLDPNELERGFNEGVFTAAXLYPA----TSVDAI-------MPV 115
Query: 123 LEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTXXXXXXXXXXXXKVVMEHITTMDAVK 182
           LE M +  MPLLVHGEVT   +DIFDRE  FI++            KVV EHITT DA  
Sbjct: 116 LERMEKIGMPLLVHGEVTHADIDIFDREARFIESVMEPLRQRLTALKVVFEHITTKDAAD 175
Query: 183 FVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRK 242
           +V    E  +AAT+TPQHL+ NRN +  GG+RPH YCLP+LKR IH+QA+   V SG  +
Sbjct: 176 YVRDGNER-LAATITPQHLMFNRNHMLVGGVRPHLYCLPILKRNIHQQALRELVASGFNR 234
Query: 243 FFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYG 302
            FLGTDSAPH R RKE +CGCAG +NAP AL  YA VFEEM AL   EAF S NGP FYG
Sbjct: 235 VFLGTDSAPHARHRKESSCGCAGCFNAPTALGSYATVFEEMNALQHFEAFCSVNGPQFYG 294
Query: 303 LPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEW 341
           LP N + I+L +   +V E+ + +   ++P  AG T+ W
Sbjct: 295 LPVNDTFIELVREEQQVAESIALTDDTLVPFLAGETVRW 333

>pdb|3PNU|A Chain A, 2.4 Angstrom Crystal Structure Of Dihydroorotase (Pyrc) From Campylobacter Jejuni. Length = 359

Iteration: 1
 Score =  210 bits (534), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 125/343 (36%), Positives = 183/343 (53%), Gaps = 14/343 (4%)
Query: 3   LTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKAL 62
           + L  P D HLHLRD  +L+ + P S   +  A++MPNL PP+       AY+  ILKA 
Sbjct: 25  MKLKNPLDMHLHLRDNQMLELIAPLSARDFCAAVIMPNLIPPLCNLEDLKAYKMRILKAC 84
Query: 63  PASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVH- 121
               NFTPLMTL+  +    DE  L      +F + LYPAG TTNS  GV+    + +  
Sbjct: 85  -KDENFTPLMTLFFKNY---DEKFLYSAKDEIFGIXLYPAGITTNSNGGVSSFDIEYLKP 140
Query: 122 VLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTXXXXXXXXXXXXKVVMEHITTMDAV 181
            LE M + N+PLLVHGE  D ++D   RE  F               K+VMEHITT    
Sbjct: 141 TLEAMSDLNIPLLVHGETNDFVMD---RESNFAKIYEKLAKHFPRL-KIVMEHITTKTLC 196
Query: 182 KFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSR 241
           + ++  +  +  AT+T  HL++  + +  G + PH +C P+ KR   ++A+     SG  
Sbjct: 197 ELLKDYENLY--ATITLHHLIITLDDVIGGKMNPHLFCKPIAKRYEDKEALCELAFSGYE 254
Query: 242 KFFLGTDSAPHERGRKECACGC-AGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDF 300
           K   G+DSAPH +  KEC CGC AG+++APV L + A++F++  + + L+ F S N    
Sbjct: 255 KVMFGSDSAPHPKDTKEC-CGCAAGVFSAPVILPVLAELFKQNSSEENLQKFLSDNTCKI 313
Query: 301 YGLPRNTSKI-KLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQ 342
           Y L     KI  L +  W+VP  +   +  ++P  AG  L++Q
Sbjct: 314 YDLKFKEDKILTLEEKEWQVPNVYEDKYNQVVPYMAGEILKFQ 356

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	346
2z26_A	347	Dihydroorotase, dhoase; TIM barrel, hydrolase; HET	1e-147
3pnu_A	359	Dihydroorotase; TIM barrel, zinc binding, hydrolas	1e-135
3e74_A	473	Allantoinase; (beta/alpha)8-barrel domain, small b	3e-07
2gwn_A	452	Dihydroorotase; zinc-binding prote structural geno	1e-06
1xrt_A	467	Dihydroorotase, dhoase; amidohydrolase, metalloenz	7e-06
1gkp_A	458	Hydantoinase; hydrolase, dihydropyrimidinase, cycl	2e-05
2z00_A	426	Dihydroorotase; zinc binding protein, hydrolase, m	3e-05
3mpg_A	428	Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus	3e-05
3gri_A	424	Dihydroorotase, dhoase; hydrolase, IDP00795, metal	5e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04
1gkr_A	458	Hydantoinase, non-ATP dependent L-selective hydant	7e-05
3hm7_A	448	Allantoinase; metallo-dependent hydrolase, protein	1e-04

>2z26_A Dihydroorotase, dhoase; TIM barrel, hydrolase; HET: KCX DOR NCD; 1.29A {Escherichia coli} PDB: 2z24_A* 2z25_A* 2eg6_A* 1xge_A* 2eg7_A* 2eg8_A* 2z27_A* 2e25_A* 2z28_A* 2z29_A* 3mjm_A* 2z2a_A* 1j79_A* 2z2b_A* 3ihn_A* 3jze_A* Length = 347

 Score =  418 bits (1075), Expect = e-147
 Identities = 194/341 (56%), Positives = 236/341 (69%), Gaps = 2/341 (0%)

Query: 2   ELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKA 61
            L + +PDDWHLHLRDGD+LK VVP++   YGRAIVMPNL PP+TT  AAVAYR+ IL A
Sbjct: 6   VLKIRRPDDWHLHLRDGDMLKTVVPYTSEIYGRAIVMPNLAPPVTTVEAAVAYRQRILDA 65

Query: 62  LPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVH 121
           +PA  +FTPLMT YLTD+  P+E++     GV  A KLYPA AT NS  GVT      + 
Sbjct: 66  VPAGHDFTPLMTCYLTDSLDPNELERGFNEGVFTAAKLYPANATANSSHGVTS-VDAIMP 124

Query: 122 VLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAV 181
           VLE M +  MPLLVHGEVT   +DIFDRE  FI+++++PL QRL  LKVV EHITT DA 
Sbjct: 125 VLERMEKIGMPLLVHGEVTHADIDIFDREARFIESVMEPLRQRLTALKVVFEHITTKDAA 184

Query: 182 KFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSR 241
            +V    E   AAT+TPQHL+ NRN +  GG+RPH YCLP+LKR IH+QA+   V SG  
Sbjct: 185 DYVRDGNERL-AATITPQHLMFNRNHMLVGGVRPHLYCLPILKRNIHQQALRELVASGFN 243

Query: 242 KFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFY 301
           + FLGTDSAPH R RKE +CGCAG +NAP AL  YA VFEEM AL   EAF S NGP FY
Sbjct: 244 RVFLGTDSAPHARHRKESSCGCAGCFNAPTALGSYATVFEEMNALQHFEAFCSVNGPQFY 303

Query: 302 GLPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQ 342
           GLP N + I+L +   +V E+ + +   ++P  AG T+ W 
Sbjct: 304 GLPVNDTFIELVREEQQVAESIALTDDTLVPFLAGETVRWS 344

>3pnu_A Dihydroorotase; TIM barrel, zinc binding, hydrolase, structu genomics, center for structural genomics of infectious DISE csgid; HET: KCX; 2.40A {Campylobacter jejuni subsp} Length = 359

 Score =  387 bits (995), Expect = e-135
 Identities = 126/343 (36%), Positives = 184/343 (53%), Gaps = 12/343 (3%)

Query: 2   ELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKA 61
            + L  P D HLHLRD  +L+ + P S   +  A++MPNL PP+       AY+  ILKA
Sbjct: 24  AMKLKNPLDMHLHLRDNQMLELIAPLSARDFCAAVIMPNLIPPLCNLEDLKAYKMRILKA 83

Query: 62  LPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLF-GKCV 120
                NFTPLMTL+  +     E  L      +F +KLYPAG TTNS  GV+        
Sbjct: 84  CK-DENFTPLMTLFFKNYD---EKFLYSAKDEIFGIKLYPAGITTNSNGGVSSFDIEYLK 139

Query: 121 HVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDA 180
             LE M + N+PLLVHGE  D +    DRE  F   I + L +  P+LK+VMEHITT   
Sbjct: 140 PTLEAMSDLNIPLLVHGETNDFV---MDRESNFAK-IYEKLAKHFPRLKIVMEHITTKTL 195

Query: 181 VKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGS 240
            + ++  +   + AT+T  HL++  + +  G + PH +C P+ KR   ++A+     SG 
Sbjct: 196 CELLKDYE--NLYATITLHHLIITLDDVIGGKMNPHLFCKPIAKRYEDKEALCELAFSGY 253

Query: 241 RKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDF 300
            K   G+DSAPH +  KEC    AG+++APV L + A++F++  + + L+ F S N    
Sbjct: 254 EKVMFGSDSAPHPKDTKECCGCAAGVFSAPVILPVLAELFKQNSSEENLQKFLSDNTCKI 313

Query: 301 YGLPRNTSKI-KLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQ 342
           Y L     KI  L +  W+VP  +   +  ++P  AG  L++Q
Sbjct: 314 YDLKFKEDKILTLEEKEWQVPNVYEDKYNQVVPYMAGEILKFQ 356

>3e74_A Allantoinase; (beta/alpha)8-barrel domain, small beta-sheet domain, hydrolase, metal-binding, purine metabolism, zinc; HET: KCX; 2.10A {Escherichia coli} Length = 473

 Score = 50.7 bits (122), Expect = 3e-07
 Identities = 48/296 (16%), Positives = 103/296 (34%), Gaps = 38/296 (12%)

Query: 38  MPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAV 97
           MP  + P T   A++  +    K    + +   L  L      + D +    + GVV   
Sbjct: 111 MPLNQLPATVDRASIELKFDAAKG-KLTIDAAQLGGL--VSY-NIDRLHELDEVGVV-GF 165

Query: 98  KLY--PAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDR--EKVF 153
           K +    G      D       +     +++ E   P+LVH E      ++ +    +  
Sbjct: 166 KCFVATCGDRGIDNDFRDVNDWQFFKGAQKLGELGQPVLVHCENALICDELGEEAKREGR 225

Query: 154 IDTILQPL----------IQRLPQL------KVVMEHITTMDAVKFVESCKEGFVAAT-- 195
           +                 I+R+  L      ++ + H+++ + V+ V   ++     T  
Sbjct: 226 VTAHDYVASRPVFTEVEAIRRVLYLAKVAGCRLHVCHVSSPEGVEEVTRARQEGQDITCE 285

Query: 196 VTPQHLVLNRNALFQGGLRPHNY-CLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHER 254
             P + VL+ +   + G       C P ++   +++ +   + +G     L +D +P   
Sbjct: 286 SCPHYFVLDTDQFEEIG---TLAKCSPPIRDLENQKGMWEKLFNGEID-CLVSDHSPCPP 341

Query: 255 GRKE-----CACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLPR 305
             K         G AG+ +  + +     V +   +L       + N  D +GL +
Sbjct: 342 EMKAGNIMKAWGGIAGLQSC-MDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQQ 396

>2gwn_A Dihydroorotase; zinc-binding prote structural genomics, PSI, protein structure initiative, MID center for structural genomics, MCSG; HET: KCX GOL; 1.85A {Porphyromonas gingivalis} Length = 452

 Score = 49.1 bits (118), Expect = 1e-06
 Identities = 48/271 (17%), Positives = 93/271 (34%), Gaps = 46/271 (16%)

Query: 38  MPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAV 97
           MPN  PP TT    +  +  I     A +N+        T+    +  ++ +   +V  +
Sbjct: 98  MPNTNPP-TTMWERLLEKRQIGADT-AWANYGFFFGG--TNDNIDEIKRVDKH--LVPGL 151

Query: 98  KLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTI 157
           KL+       S  G   L      + +   E ++ +  H E  + I    +  K      
Sbjct: 152 KLF-----LGSSTGNM-LVDNKETLEKIFGECDLLIATHCEKEEIIRANKEHYKAKYGND 205

Query: 158 LQPL--------------IQRLPQL------KVVMEHITTMDAVKFVESCK---EGFVAA 194
           L                      +L      ++ + H++T   +    +     +  + +
Sbjct: 206 LDIHFHPLIRSEEACYRSSAEAVELAERMNARLHILHLSTEKELSLFRNDIPTAQKRITS 265

Query: 195 TVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKF-FLGTDSAPH- 252
            V   HL  +     + G        P +K+E  R+A+ +AV +G  +   + TD APH 
Sbjct: 266 EVCVHHLWFSDTDYGRLG--NRIKWNPAIKKESDREALRAAVRNG--RIDIIATDHAPHL 321

Query: 253 ----ERGRKECACGCAGIYNA-PVALSLYAK 278
               E    + A G   + ++    L L  +
Sbjct: 322 LREKEGSCLQAASGGPLVQHSLLALLELCNQ 352

>1xrt_A Dihydroorotase, dhoase; amidohydrolase, metalloenzyme, pyrimidine; 1.61A {Aquifex aeolicus} SCOP: b.92.1.3 c.1.9.6 PDB: 1xrf_A 3d6n_A* Length = 467

 Score = 46.4 bits (111), Expect = 7e-06
 Identities = 35/142 (24%), Positives = 57/142 (40%), Gaps = 15/142 (10%)

Query: 174 HITTMDAVKFVESCKE-GF-VAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQA 231
           H++T  +++ +E  KE G  +   V P HL+     +       +    P L+++  R A
Sbjct: 277 HVSTKLSLEIIEFFKEKGVKITCEVNPNHLLFTEREV--LNSGANARVNPPLRKKEDRLA 334

Query: 232 VVSAVTSGSRKFFLGTDSAPHERGRKEC----ACGCAGIYNA-PVALSLYAK-VFEEMGA 285
           ++  V  G       TD APH+   KE       G  G+  A P AL LY K +      
Sbjct: 335 LIEGVKRGIID-CFATDHAPHQTFEKELVEFAMPGIIGLQTALPSALELYRKGIISLKKL 393

Query: 286 LDKLEAFTSFNGPDFYGLPRNT 307
           ++      + N     G+   T
Sbjct: 394 IEMF----TINPARIIGVDLGT 411

>1gkp_A Hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX EPE; 1.29A {Thermus SP} SCOP: b.92.1.3 c.1.9.6 PDB: 1gkq_A* Length = 458

 Score = 45.2 bits (108), Expect = 2e-05
 Identities = 37/259 (14%), Positives = 81/259 (31%), Gaps = 40/259 (15%)

Query: 38  MPNLKPPITTTAAAVAYRESILKALP-ASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFA 96
           M               ++    KA   +  ++T  M +   D  +  +++     G+  +
Sbjct: 92  MCCPSRNDDALEGYQLWKS---KAEGNSYCDYTFHMAVSKFDEKTEGQLREIVADGIS-S 147

Query: 97  VKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDR--EKVFI 154
            K++    +  +  GV D  G+    L    E  + +  H E  + +  +  +   +   
Sbjct: 148 FKIF---LSYKNFFGVDD--GEMYQTLRLAKELGVIVTAHCENAELVGRLQQKLLSEGKT 202

Query: 155 DTILQPL----------IQRLPQL------KVVMEHITTMDAVKFVESCKEGFVAAT--V 196
                              R             + H++   A+    + K   V      
Sbjct: 203 GPEWHEPSRPEAVEAEGTARFATFLETTGATGYVVHLSCKPALDAAMAAKARGVPIYIES 262

Query: 197 TPQHLVLNRNALFQGGLRPHNY-CLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERG 255
              H +L++    +GG+    Y   P L+ + +++ +  A+  G     +GTD  P +  
Sbjct: 263 VIPHFLLDKTYAERGGVEAMKYIMSPPLRDKRNQKVLWDALAQGFID-TVGTDHCPFDTE 321

Query: 256 RKE--------CACGCAGI 266
           +K            G   I
Sbjct: 322 QKLLGKEAFTAIPNGIPAI 340

>2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus} Length = 426

 Score = 44.8 bits (107), Expect = 3e-05
 Identities = 38/140 (27%), Positives = 52/140 (37%), Gaps = 9/140 (6%)

Query: 174 HITTMDAVKFVESCK-EGF-VAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQA 231
           H++T   ++ V   K  G  V A  TP HL L   AL      P     P L+ E  R+A
Sbjct: 233 HLSTKRGLELVREAKRAGLPVTAEATPHHLTLTEEAL--RTFDPLFKVAPPLRGEEDREA 290

Query: 232 VVSAVTSGSRKFFLGTDSAPHERGRKECACGCA--GIYNAPVALSLYAKVFEEMGALD-- 287
           ++  +  G+    + TD APH    KE     A  GI +  VA  L              
Sbjct: 291 LLEGLLDGTLD-AIATDHAPHTLAEKEKDLLRAPFGIPSLEVAFPLLYTELHLKRGFPLQ 349

Query: 288 KLEAFTSFNGPDFYGLPRNT 307
           +L    +       GLP   
Sbjct: 350 RLVELFTDGPRRVLGLPPLH 369

>3mpg_A Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus anthracis} Length = 428

 Score = 44.4 bits (106), Expect = 3e-05
 Identities = 36/140 (25%), Positives = 57/140 (40%), Gaps = 9/140 (6%)

Query: 174 HITTMDAVKFVESCKE-GF-VAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQA 231
           H++T  +V+ +   K  G  V A VTP HLVL  + +      P+    P L+ +   +A
Sbjct: 231 HVSTKGSVRVIRDAKRAGIKVTAEVTPHHLVLCEDDI--PSADPNFKMNPPLRGKEDHEA 288

Query: 232 VVSAVTSGSRKFFLGTDSAPHERGRKECACGCA--GIYNAPVALSLYAKVFEEMGALD-- 287
           ++  +  G+    + TD APH    K      A  GI     A  L      + G +   
Sbjct: 289 LIEGLLDGTID-MIATDHAPHTAEEKAQGIERAPFGITGFETAFPLLYTNLVKKGIITLE 347

Query: 288 KLEAFTSFNGPDFYGLPRNT 307
           +L  F +    D +GL    
Sbjct: 348 QLIQFLTEKPADTFGLEAGR 367

>3gri_A Dihydroorotase, dhoase; hydrolase, IDP00795, metal-binding, pyrimidine biosynthesis, structural genomics; 2.00A {Staphylococcus aureus subsp} Length = 424

 Score = 43.6 bits (104), Expect = 5e-05
 Identities = 36/140 (25%), Positives = 59/140 (42%), Gaps = 9/140 (6%)

Query: 174 HITTMDAVKFVESCKE-GF-VAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQA 231
           H++T ++V+ +   K  G  V A VTP HL+L  + +   G        P L+    R+A
Sbjct: 230 HVSTKESVRVIRDAKRAGIHVTAEVTPHHLLLTEDDI--PGNNAIYKMNPPLRSTEDREA 287

Query: 232 VVSAVTSGSRKFFLGTDSAPHERGRKECACGCA--GIYNAPVALSLYAKVFEEMGALD-- 287
           ++  +  G+    + TD APH R  K      A  GI  +  A  L    F + G     
Sbjct: 288 LLEGLLDGTID-CIATDHAPHARDEKAQPMEKAPFGIVGSETAFPLLYTHFVKNGDWTLQ 346

Query: 288 KLEAFTSFNGPDFYGLPRNT 307
           +L  + +    + + L   T
Sbjct: 347 QLVDYLTIKPCETFNLEYGT 366

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.1 bits (103), Expect = 5e-05
 Identities = 46/295 (15%), Positives = 84/295 (28%), Gaps = 72/295 (24%)

Query: 73  TLYLT-DTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHV----LEEMV 127
            L  T      D +  A  T +   +  +    T    D V  L  K +      L   V
Sbjct: 268 ILLTTRFKQVTDFLSAATTTHIS--LDHHSMTLT---PDEVKSLLLKYLDCRPQDLPREV 322

Query: 128 EQNMPLLVH--GEVTDPIVDIFDR-EKVFIDTI----------LQPLIQR--LPQLKVVM 172
               P  +    E     +  +D  + V  D +          L+P   R    +L V  
Sbjct: 323 LTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFP 382

Query: 173 E--HITTMDAVKF-VESCKEGFVAATVTPQHLV--LNRNALFQGGLRPHNYCLPVL---- 223
              HI T+       +  K            +V  L++ +L +   +     +P +    
Sbjct: 383 PSAHIPTILLSLIWFDVIKS-------DVMVVVNKLHKYSLVEKQPKESTISIPSIYLEL 435

Query: 224 ------KREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYA 277
                 +  +HR  +V    +  + F       P+              Y        Y+
Sbjct: 436 KVKLENEYALHRS-IVDHY-NIPKTFDSDDLIPPYLDQ-----------Y-------FYS 475

Query: 278 KVFEEMGALDKLEAFTSFNGP--DFYGLPRNTSKIKLTKIPWKVPEAFSFSFGDI 330
            +   +  ++  E  T F     DF  L +   KI+     W    +   +   +
Sbjct: 476 HIGHHLKNIEHPERMTLFRMVFLDFRFLEQ---KIRHDSTAWNASGSILNTLQQL 527

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.3 bits (101), Expect = 1e-04
 Identities = 63/408 (15%), Positives = 110/408 (26%), Gaps = 163/408 (39%)

Query: 19  DLLKAVV-----------PHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSN 67
           D+ K+++             +VS   R       K           + E +L+      N
Sbjct: 40  DMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQ----EEMVQKFVEEVLRI-----N 90

Query: 68  FTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLF---GKCVHVLE 124
           +  LM+   T+   P    +  +  +    +LY      N             +    L 
Sbjct: 91  YKFLMSPIKTEQRQPS---MMTRMYIEQRDRLY------NDNQVFAKYNVSRLQPYLKLR 141

Query: 125 EMVEQNMP---LLVHG-----------EV--TDPIVDIFDREKVF---------IDTILQ 159
           + + +  P   +L+ G           +V  +  +    D  K+F          +T+L+
Sbjct: 142 QALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDF-KIFWLNLKNCNSPETVLE 200

Query: 160 PLIQRL-----PQLKVVMEHITTMDAVKF-VESCKEGFVAATVTPQHLVLNRNALFQGGL 213
            L Q+L     P      +H      +K  + S +              L R  L +   
Sbjct: 201 ML-QKLLYQIDPNWTSRSDH---SSNIKLRIHSIQAE------------LRR--LLK--S 240

Query: 214 RPHNYCLPVL-----KREIH------------RQAVVSAVTSGSRKF------------- 243
           +P+  CL VL      +  +            R   V+   S +                
Sbjct: 241 KPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTP 300

Query: 244 ---------FLGTDSA--PHERGRKECACGCAGIYNAPVALSLYAKVFEEMGA------- 285
                    +L       P E                P  LS+ A+   +  A       
Sbjct: 301 DEVKSLLLKYLDCRPQDLPRE------VLTT-----NPRRLSIIAESIRDGLATWDNWKH 349

Query: 286 --LDKLEAF--TSFNG--PD-----FYGL---PRNTSKIKLTKIPWKV 319
              DKL     +S N   P      F  L   P +        IP  +
Sbjct: 350 VNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPS------AHIPTIL 391

>1gkr_A Hydantoinase, non-ATP dependent L-selective hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX; 2.60A {Arthrobacter aurescens} SCOP: b.92.1.3 c.1.9.6 Length = 458

 Score = 43.3 bits (103), Expect = 7e-05
 Identities = 46/260 (17%), Positives = 87/260 (33%), Gaps = 45/260 (17%)

Query: 38  MPNLKPPITTTAAAVAYRESILKALP-ASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFA 96
           MP   PP TT  A +  ++   +A      +F            +  EI+     G V  
Sbjct: 93  MPITFPPTTTLDAFLEKKK---QAGQRLKVDFALYGGG--VPG-NLPEIRKMHDAGAV-G 145

Query: 97  VKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDT 156
            K   A +     D V+D  G+   + +E+      ++VH E    I  +  ++++    
Sbjct: 146 FKSMMAASVPGMFDAVSD--GELFEIFQEIAACGSVIVVHAENETIIQAL--QKQIKAAG 201

Query: 157 ILQPL--------------IQRLPQL------KVVMEHITTMDAVKFVESCKEGFVAATV 196
                              IQR   L      ++++ H++  D V+ +   +        
Sbjct: 202 GKDMAAYEASQPVFQENEAIQRALLLQKEAGCRLIVLHVSNPDGVELIHQAQSEGQDVHC 261

Query: 197 --TPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHER 254
              PQ+L +  +   + G  P+    P ++       +   + +G     LG+D   H  
Sbjct: 262 ESGPQYLNITTDDAERIG--PYMKVAPPVRSAEMNIRLWEQLENGLID-TLGSDHGGHPV 318

Query: 255 GRKE--------CACGCAGI 266
             KE           G  G+
Sbjct: 319 EDKEPGWKDVWKAGNGALGL 338

>3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans} Length = 448

 Score = 42.6 bits (101), Expect = 1e-04
 Identities = 39/257 (15%), Positives = 85/257 (33%), Gaps = 40/257 (15%)

Query: 38  MP-NLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFA 96
           MP N  PP  T       R+   +   +  ++     L        D ++     GV   
Sbjct: 97  MPLNSNPPTITREELDKKRQLANEK--SLVDYRFWGGL--VPGN-IDHLQDLHDGGV-IG 150

Query: 97  VKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDR--EKVFI 154
            K + +   T+      D     +  ++++      L VH E  + +  +     E+  +
Sbjct: 151 FKAFMSECGTDDFQFSHD--ETLLKGMKKIAALGSILAVHAESNEMVNALTTIAIEEQRL 208

Query: 155 DTILQPL----------IQRLPQL------KVVMEHITTMDAVKFVESCK-EGF-VAATV 196
                            ++R+ +        + + H+++   +K ++  K EG  V+   
Sbjct: 209 TVKDYSEARPIVSELEAVERILRFAQLTCCPIHICHVSSRKVLKRIKQAKGEGVNVSVET 268

Query: 197 TPQHLVLNRNALFQGGLRPHNY-CLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERG 255
            P +L+ + +   + G       C P L+     + +   + +G     + +D +P    
Sbjct: 269 CPHYLLFSLDEFAEIGYL---AKCAPPLRERQEVEDLWDGLMAGEID-LISSDHSPSLPQ 324

Query: 256 RKE------CACGCAGI 266
            K          G AG 
Sbjct: 325 MKTGKTIFEVWGGIAGC 341

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	346
3pnu_A	359	Dihydroorotase; TIM barrel, zinc binding, hydrolas	100.0
2z26_A	347	Dihydroorotase, dhoase; TIM barrel, hydrolase; HET	100.0
3dc8_A	490	Dihydropyrimidinase; TIM-barrel, hydrolase; HET: K	100.0
3e74_A	473	Allantoinase; (beta/alpha)8-barrel domain, small b	100.0
3gri_A	424	Dihydroorotase, dhoase; hydrolase, IDP00795, metal	100.0
3hm7_A	448	Allantoinase; metallo-dependent hydrolase, protein	100.0
3sfw_A	461	Dihydropyrimidinase; hydrolase, zinc binding; HET:	100.0
3mpg_A	428	Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus	100.0
2fty_A	559	Dihydropyrimidinase; alpha/beta barrel, beta-sandw	100.0
2ftw_A	521	Dihydropyrimidine amidohydrolase; (beta-alpha)8-ba	100.0
2gwn_A	452	Dihydroorotase; zinc-binding prote structural geno	100.0
2vr2_A	541	Dihydropyrimidinase; hydantoinase, metal-binding,	100.0
2z00_A	426	Dihydroorotase; zinc binding protein, hydrolase, m	100.0
1gkp_A	458	Hydantoinase; hydrolase, dihydropyrimidinase, cycl	100.0
1gkr_A	458	Hydantoinase, non-ATP dependent L-selective hydant	100.0
1nfg_A	457	D-hydantoinase; TIM barrel, hydrolase; HET: KCX; 2	100.0
2vm8_A	501	Dihydropyrimidinase-related protein 2; neurogenesi	100.0
1xrt_A	467	Dihydroorotase, dhoase; amidohydrolase, metalloenz	100.0
3gip_A	480	N-acyl-D-glutamate deacylase; amidohydrolase famil	100.0
1rk6_A	496	D-aminoacylase; TIM barrel, beta barrel, insertion	99.95
1e9y_B	569	Urease subunit beta; hydrolase, dodecamer; HET: KC	99.92
2ics_A	379	Adenine deaminase; TIM barrel, binuclear zinc, ade	99.9
1onw_A	390	Isoaspartyl dipeptidase; amidohydrolase, hydrolase	99.86
2ogj_A	417	Dihydroorotase; TIM barrel, binuclear zinc, imidaz	99.84
2vhl_A	396	N-acetylglucosamine-6-phosphate deacetylase; N- ac	99.8
2vun_A	386	Enamidase; nicotinate degradation, binuclear metal	99.79
4ac7_C	570	Urease subunit alpha; hydrolase, bacillus pasteuri	99.78
4gy7_A	840	Urease; JACK bean, hydrolase, ME binding, nickel;	99.77
4ubp_C	570	Protein (urease (chain C)); bacillus pasteurii, ni	99.77
4ep8_C	566	Urease subunit alpha; alpha-beta barrel, nickel me	99.77
1p1m_A	406	Hypothetical protein TM0936; putative metal depend	99.76
1ra0_A	430	Cytosine deaminase; alpha-beta barrel, hexamer, co	99.74
2ood_A	475	BLR3880 protein; PSI-II, PSI-2, guanine deaminase,	99.73
2p9b_A	458	Possible prolidase; protein structure initiative I	99.72
2i9u_A	439	Cytosine/guanine deaminase related protein; protei	99.72
3be7_A	408	Zn-dependent arginine carboxypeptidase; unknown so	99.71
2paj_A	492	Putative cytosine/guanine deaminase; NYSGXRC, PSI-	99.69
1o12_A	376	N-acetylglucosamine-6-phosphate deacetylase; struc	99.66
3nqb_A	608	Adenine deaminase 2; PSI-II, structural genomics,	99.65
2imr_A	420	Hypothetical protein DR_0824; zinc, NYSGXRC, PSI2,	99.63
3gnh_A	403	L-lysine, L-arginine carboxypeptidase CC2672; N-me	99.56
2r8c_A	426	Putative amidohydrolase; unknown source, sargasso	99.52
2qt3_A	403	N-isopropylammelide isopropyl amidohydrolase; N-is	99.52
2q09_A	416	Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dio	99.51
3h4u_A	479	Amidohydrolase; signature of Zn ligands, structura	99.51
3feq_A	423	Putative amidohydrolase; unknown source, sargasso	99.5
2qs8_A	418	XAA-Pro dipeptidase; amidohydrolase, TIM barrel, p	99.5
4f0r_A	447	5-methylthioadenosine/S-adenosylhomocysteine DEAM;	99.47
3ls9_A	456	Triazine hydrolase; atrazine chlorohydrolase TRZN;	99.44
3lnp_A	468	Amidohydrolase family protein OLEI01672_1_465; TIM	99.42
4dyk_A	451	Amidohydrolase; adenosine deaminase, nysgrc, struc	99.4
1bf6_A	291	Phosphotriesterase homology protein; hypothetical	99.38
4dzh_A	472	Amidohydrolase; adenosine deaminase, nysgrc, struc	99.35
2puz_A	419	Imidazolonepropionase; NYSGXRC, PSI-2, N-formimino	99.35
4aql_A	476	Guanine deaminase; hydrolase, purine metabolism; H	99.29
3v7p_A	427	Amidohydrolase family protein; iron binding site,	99.2
3ooq_A	396	Amidohydrolase; structural genomics, protein struc	99.16
4f0l_A	458	Amidohydrolase; ssgcid, structural genomics, seatt	99.15
3iv8_A	381	N-acetylglucosamine-6-phosphate deacetylase; IDP01	99.13
2bb0_A	421	Imidazolonepropionase; TIM barrel, hydrolase; 2.00	99.13
3mdu_A	453	N-formimino-L-glutamate iminohydrolase; amonohydra	99.05
3icj_A	534	Uncharacterized metal-dependent hydrolase; structu	99.01
1yrr_A	382	N-acetylglucosamine-6-phosphate deacetylase; (beta	98.94
2ffi_A	288	2-pyrone-4,6-dicarboxylic acid hydrolase, putativ;	98.94
4i6k_A	294	Amidohydrolase family protein; enzyme function ini	98.92
3mtw_A	403	L-arginine carboxypeptidase CC2672; hydrolase; HET	98.89
3hpa_A	479	Amidohydrolase; signature of Zn ligands, structura	98.68
1zzm_A	259	Putative deoxyribonuclease YJJV; hydrolaze, zinc,	98.62
1yix_A	265	Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW	98.57
2dvt_A	327	Thermophilic reversible gamma-resorcylate decarbo;	98.55
2y1h_A	272	Putative deoxyribonuclease tatdn3; hydrolase; 2.50	98.53
4d9a_A	303	2-pyrone-4,6-dicarbaxylate hydrolase; structural g	98.49
2gzx_A	265	Putative TATD related DNAse; deoxyribonuclease, NE	98.47
2vc7_A	314	Aryldialkylphosphatase; phosphotriesterase, promis	98.44
1xwy_A	264	DNAse TATD, deoxyribonuclease TATD; TIM barrael, z	98.4
2f6k_A	307	Metal-dependent hydrolase; metal dependent hydroly	98.38
3cjp_A	272	Predicted amidohydrolase, dihydroorotase family; s	98.33
1j6o_A	268	TATD-related deoxyribonuclease; structural genomic	98.32
3rcm_A	287	TATD family hydrolase; HET: CIT; 2.05A {Pseudomona	98.29
4do7_A	303	Amidohydrolase 2; enzyme function initiative, EFI,	98.18
2ob3_A	330	Parathion hydrolase; metalloenzyme, TIM barrel, ne	98.09
2xio_A	301	Putative deoxyribonuclease tatdn1; hydrolase; 1.19	97.85
2hbv_A	334	2-amino-3-carboxymuconate 6-semialdehyde decarbox;	97.72
3irs_A	291	Uncharacterized protein BB4693; structural genomic	97.7
3ij6_A	312	Uncharacterized metal-dependent hydrolase; structu	97.68
2wm1_A	336	2-amino-3-carboxymuconate-6-semialdehyde decarboxy	97.64
4inf_A	373	Metal-dependent hydrolase; amidohydrolase, metal b	97.57
4dzi_A	423	Putative TIM-barrel metal-dependent hydrolase; ami	97.45
3nur_A	357	Amidohydrolase; TIM barrel; 1.75A {Staphylococcus	97.31
3tn4_A	360	Phosphotriesterase; lactonase, hydrolase; HET: KCX	96.89
3ipw_A	325	Hydrolase TATD family protein; niaid, ssgcid, seat	96.82
3rhg_A	365	Putative phophotriesterase; hydrolase, amidohydrol	96.72
3gtx_A	339	Organophosphorus hydrolase; mutant, amidohydrolase	96.67
3k2g_A	364	Resiniferatoxin-binding, phosphotriesterase- relat	96.65
3mkv_A	426	Putative amidohydrolase; sargasso SEA, structural	96.43
3pnz_A	330	Phosphotriesterase family protein; amidohydrolase	96.0
3ovg_A	363	Amidohydrolase; structural genomics, PSI-2, protei	95.91
3guw_A	261	Uncharacterized protein AF_1765; alpha-beta protei	95.58
2gwg_A	350	4-oxalomesaconate hydratase; TIM-barrel like prote	95.27
3gg7_A	254	Uncharacterized metalloprotein; structural genomic	93.69
3mkv_A	426	Putative amidohydrolase; sargasso SEA, structural	93.43
2qpx_A	376	Predicted metal-dependent hydrolase of the TIM-BA;	91.99

>3pnu_A Dihydroorotase; TIM barrel, zinc binding, hydrolase, structu genomics, center for structural genomics of infectious DISE csgid; HET: KCX; 2.40A {Campylobacter jejuni subsp}

Probab=100.00  E-value=9e-85  Score=627.24  Aligned_cols=331  Identities=37%  Similarity=0.648  Sum_probs=291.3

Q ss_pred             eEEecCccccceecCCCccccccccccCCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCC
Q 019093            2 ELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTS   81 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~g~~~ke~~~s~sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~   81 (346)
                      ++|+||+||+|||+|+|.+++|++...+||+|||++||||.|++++.+.++.+++++++.+. .|||++|++++++ +.+
T Consensus        24 ~~vlPG~ID~HvHlreG~~~~e~~aA~aGG~Ttvi~mPnt~P~~~~~~~~~~~~~~a~~~~~-~vd~~~~~~l~lt-~~~  101 (359)
T 3pnu_A           24 AMKLKNPLDMHLHLRDNQMLELIAPLSARDFCAAVIMPNLIPPLCNLEDLKAYKMRILKACK-DENFTPLMTLFFK-NYD  101 (359)
T ss_dssp             CEEEESCEEEEECCCSHHHHHHHHHHHHTTCSEEEECCCCSSCCCSHHHHHHHHHHHHHHHT-TSCCEEEEEEECS-CCC
T ss_pred             cEEccCcEEccccCCCCCcchhHHHHHhCCCcEEEECCCCCCCCCcHHHHHHHHHHHhccCC-CceEEEeeeeEec-CCC
Confidence            68999999999999998888999988889999999999999999999999999998876542 2899999994447 457


Q ss_pred             HHHHHHHHHcCCeeEEEEeecCCccCCCCC--ccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHH
Q 019093           82 PDEIKLARKTGVVFAVKLYPAGATTNSQDG--VTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQ  159 (346)
Q Consensus        82 ~~el~~l~~~G~v~~~Kif~~~~~~~~~~~--~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~  159 (346)
                      .+||.+|.+.  |+|||+||++..++++.+  +.|+ +.++++|+++++.|+++++||||.++   +..+|.+++.|++ 
T Consensus       102 ~~el~~l~~~--v~~~Kl~~aga~~~s~~~~~~~~~-~~l~~~l~~~~~~g~~v~vHaEd~~~---i~~~E~~ai~r~~-  174 (359)
T 3pnu_A          102 EKFLYSAKDE--IFGIKLYPAGITTNSNGGVSSFDI-EYLKPTLEAMSDLNIPLLVHGETNDF---VMDRESNFAKIYE-  174 (359)
T ss_dssp             HHHHHHHTTT--CSEEEECBTTSSSSCTTSBCCCCH-HHHHHHHHHHHHTTCCEEECCCCSSC---GGGTTGGGHHHHH-
T ss_pred             HHHHHHHHHh--hhehhheeCCCcccCcCCcccCCH-HHHHHHHHHHHHcCCEEEEecCCchH---hHHHHHHHHHHHH-
Confidence            8999999765  679999998765555444  3376 89999999999999999999999986   3568888999988 


Q ss_pred             HHHHh-CCCCcEEEEccCCHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHc
Q 019093          160 PLIQR-LPQLKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTS  238 (346)
Q Consensus       160 ~~la~-~~g~~lhi~HvSt~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~  238 (346)
                       .+++ ++|+|+||+|+||++++++|++|  .+||||||||||+||++++..+++++.+|||||||+++||++||++|++
T Consensus       175 -~la~~~~g~~lhi~HvSt~~~v~~I~~A--~~VtaEv~phhL~lt~~~~~~~~~~~~~k~~PPLR~~~dr~aL~~al~d  251 (359)
T 3pnu_A          175 -KLAKHFPRLKIVMEHITTKTLCELLKDY--ENLYATITLHHLIITLDDVIGGKMNPHLFCKPIAKRYEDKEALCELAFS  251 (359)
T ss_dssp             -HHHHHCTTSCEEECSCCSHHHHHHHHHC--TTEEEEECSGGGTCCHHHHHTSSCCGGGCCSSCCCCHHHHHHHHHHHHT
T ss_pred             -HHHHHcCCCcEEEEecCcHHHHHHHHhc--CCceEEEechhhEEcHHHhcCcCCCCceEEcCCCCCHHHHHHHHHHHhc
Confidence             7887 67999999999999999999998  7899999999999999999754568999999999999999999999999


Q ss_pred             CCcc-EEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHchhhhhhcCCC-CCCccEEEEecc
Q 019093          239 GSRK-FFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLP-RNTSKIKLTKIP  316 (346)
Q Consensus       239 G~Id-~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~~~~l~~lv~~~s~nPAki~gl~-~kdAdlvi~d~~  316 (346)
                      |+|| + |+||||||+.++|+.+++.+|++++++.||++|+.++++++|++++++||.||||+|||+ ++.|||+|||++
T Consensus       252 G~id~~-iaTDHaPh~~~eK~~~~g~~Gi~~~~~~L~l~~~~~~~~~~l~~lv~~~s~nPAki~gL~~~~GAdlvl~d~~  330 (359)
T 3pnu_A          252 GYEKVM-FGSDSAPHPKDTKECCGCAAGVFSAPVILPVLAELFKQNSSEENLQKFLSDNTCKIYDLKFKEDKILTLEEKE  330 (359)
T ss_dssp             TCTTEE-ECCCBCCCBC------CCCSCBCCGGGHHHHHHHHHHHHSCHHHHHHHHTHHHHHHHTCCCSSCCEEEEECCC
T ss_pred             CCCCEE-EecCCCCCCHHHhCCCCCCCChhhHHHHHHHHHHHHhhcCCHHHHHHHHHHhHHHHhCCCCCCCCeEEEEecC
Confidence            9999 8 999999999999988888889999999999999888778899999999999999999995 345899999999


Q ss_pred             eeecCCccccCCcccccCCCcEEEEEEEE
Q 019093          317 WKVPEAFSFSFGDIIPMFAGNTLEWQPSL  345 (346)
Q Consensus       317 ~~v~~~~~~s~~~~sp~~~G~~l~G~v~~  345 (346)
                      |+|+++.++|+++||||++|++++|+|++
T Consensus       331 ~~v~~~~~~s~~~~tPf~~G~~l~G~v~~  359 (359)
T 3pnu_A          331 WQVPNVYEDKYNQVVPYMAGEILKFQLKH  359 (359)
T ss_dssp             EECCSCEECSSCEECCTTTTCEESCEECC
T ss_pred             EEeCchhcccCCCccccCCCCEEEEEEeC
Confidence            99999999999999999339999999963

>2z26_A Dihydroorotase, dhoase; TIM barrel, hydrolase; HET: KCX DOR NCD; 1.29A {Escherichia coli} PDB: 2z24_A* 2z25_A* 2eg6_A* 1xge_A* 2eg7_A* 2eg8_A* 2z27_A* 2e25_A* 2z28_A* 2z29_A* 3mjm_A* 2z2a_A* 1j79_A* 2z2b_A* 3ihn_A* 3jze_A*

Probab=100.00  E-value=2e-78  Score=582.31  Aligned_cols=341  Identities=56%  Similarity=0.934  Sum_probs=294.9

Q ss_pred             CeEEecCccccceecCCCccccccccccCCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCC
Q 019093            1 MELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTT   80 (346)
Q Consensus         1 ~~~vlPG~ID~HvH~r~g~~~ke~~~s~sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~   80 (346)
                      +++|+||+||+|||+|+|.+++|+.....||||||++||||.|++++.+.++.+.+++++.+...++|+++++++.+++.
T Consensus         5 ~~~v~PG~ID~HvH~~~g~~~~e~~aa~~gGvTtvv~mpnt~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (347)
T 2z26_A            5 QVLKIRRPDDWHLHLRDGDMLKTVVPYTSEIYGRAIVMPNLAPPVTTVEAAVAYRQRILDAVPAGHDFTPLMTCYLTDSL   84 (347)
T ss_dssp             CEEEEECCCEEEECCCSHHHHHHHHHHHHTTCSEEEECCCCSSCCCSHHHHHHHHHHHHHTSCTTCCCEEEEEEECCTTC
T ss_pred             CeEECCCcceeeecCCCCCchhhHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHhcccCCcccEEEEEEEEeCCCC
Confidence            57999999999999999777788866667999999999999999999999999988887654423677777876545544


Q ss_pred             CHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHH
Q 019093           81 SPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQP  160 (346)
Q Consensus        81 ~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~  160 (346)
                      +.+||.+|.++|++.|||+||++.+++++.++.++ ..|+++|+++++.|+++++||||.+.......+|.+++.+.+..
T Consensus        85 ~~~ei~~l~~~G~~~g~K~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~v~vH~ed~~~~~~~~~~E~~~~~~~i~~  163 (347)
T 2z26_A           85 DPNELERGFNEGVFTAAKLYPANATANSSHGVTSV-DAIMPVLERMEKIGMPLLVHGEVTHADIDIFDREARFIESVMEP  163 (347)
T ss_dssp             CHHHHHHHHHTTSEEEEEECCCCTTCCTTTCCSCG-GGGHHHHHHHHHHTCCEEECCCCCCTTSCGGGHHHHHHHHTHHH
T ss_pred             CHHHHHHHHHCCCeEEEEEeecCCcCCCCCccCCH-HHHHHHHHHHHHhCCEEEEEecCCccccCHHHHHHHHHHHHHHH
Confidence            57899999998933799999987544444555566 88999999999999999999999862223445688888888744


Q ss_pred             HHHhCCCCcEEEEccCCHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCC
Q 019093          161 LIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGS  240 (346)
Q Consensus       161 ~la~~~g~~lhi~HvSt~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~  240 (346)
                      .+++++|+|+||+|+|+++++++|+++| .+||||||||||+|+++++.+.++++.+|||||||+++||++||++|.+|+
T Consensus       164 ~la~~~~~~~hi~Hvst~~~~~~i~~ak-~~Vt~e~~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~~l~~G~  242 (347)
T 2z26_A          164 LRQRLTALKVVFEHITTKDAADYVRDGN-ERLAATITPQHLMFNRNHMLVGGVRPHLYCLPILKRNIHQQALRELVASGF  242 (347)
T ss_dssp             HHHHSTTCCEEECSCCSHHHHHHHHTSC-TTEEEEECHHHHHCCHHHHHTTSBCGGGCCSSCCCCHHHHHHHHHHHHTTC
T ss_pred             HHHhhcCCcEEEEECCcHHHHHHHHHhC-CCceEeecchHheecHHHhcCcCCCccEEEeCCCCCHHHHHHHHHHHhcCC
Confidence            5899999999999999999999999998 789999999999999999964346799999999999999999999999999


Q ss_pred             cc-EEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHchhhhhhcCCCCCCccEEEEecceee
Q 019093          241 RK-FFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLPRNTSKIKLTKIPWKV  319 (346)
Q Consensus       241 Id-~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~~~~l~~lv~~~s~nPAki~gl~~kdAdlvi~d~~~~v  319 (346)
                      || + |+||||||+.++|..+++.+|++|+|++||++|++++++++|+++++++|.||||+|||+.+++.|+|||++|+|
T Consensus       243 id~~-i~SDhaP~~~~~K~~~~g~~Gi~~~e~~l~l~~~~~~~~~sl~~~v~~~s~nPAki~gl~~~kG~i~l~~~~~~v  321 (347)
T 2z26_A          243 NRVF-LGTDSAPHARHRKESSCGCAGCFNAPTALGSYATVFEEMNALQHFEAFCSVNGPQFYGLPVNDTFIELVREEQQV  321 (347)
T ss_dssp             TTEE-ECCCBCCCCHHHHSSSSBCCCCCCTTTHHHHHHHHHHHTTCGGGHHHHHHTHHHHHHTCCCCCCEEEEECCCEEC
T ss_pred             CCeE-EecCCCCCCHHHhcCCCCCCCcCcHHHHHHHHHHHhhcCCCHHHHHHHHhHhHHHHhCCCCCCCeEEEEcceEEE
Confidence            99 8 899999999999987777789999999999999877667899999999999999999996324789999989999


Q ss_pred             cCCccccCCcccccCC-CcEEEEEEEE
Q 019093          320 PEAFSFSFGDIIPMFA-GNTLEWQPSL  345 (346)
Q Consensus       320 ~~~~~~s~~~~sp~~~-G~~l~G~v~~  345 (346)
                      ++++++|+++|||| + |++++|+|++
T Consensus       322 ~~~~~~s~~~~sPf-~~G~~l~g~v~~  347 (347)
T 2z26_A          322 AESIALTDDTLVPF-LAGETVRWSVKQ  347 (347)
T ss_dssp             CSCEECSSSEECCT-TTTCEESCEEC-
T ss_pred             chhhccccCCcccc-cCCcEEEeEEeC
Confidence            99999999999999 4 9999999964

>3dc8_A Dihydropyrimidinase; TIM-barrel, hydrolase; HET: KCX; 1.85A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.9e-65  Score=511.79  Aligned_cols=330  Identities=15%  Similarity=0.109  Sum_probs=280.9

Q ss_pred             eEEecCccccceecCC-Cc--cccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-GD--LLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMT   73 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~--~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~   73 (346)
                      ++|+||+||+|+|+++ +.  .++|++.+++     |||||+++|||+.|+.+..+.++.+.+++. .+.  +||.++++
T Consensus        46 ~~v~PG~ID~H~H~~~~~~~~~~~e~~~~~~~aa~~~GvTtv~~~~~~~p~~~~~~~~~~~~~~a~-~~~--~d~~~~~~  122 (490)
T 3dc8_A           46 CYVMPGGIDPHTHLEMPFMGTYSSDDFESGTRAALAGGTTMVVDFALPSPGQSLLEALTMWDNKST-RAN--CDYSFHMA  122 (490)
T ss_dssp             CEEEECEEEEEECTTCEETTEECSCCHHHHHHHHHHTTEEEEEEEECCC-CCCHHHHHHHHHHHTT-TCS--SEEEEEEE
T ss_pred             CEEecCEEeeccccCCCCCCCCCHHHHHHHHHHHHHcCEEeecccCCCCCCcCHHHHHHHHHHHhh-ccc--ceeeeEEE
Confidence            4899999999999988 44  6789998764     999999999999999888888887777654 333  89999887


Q ss_pred             EEeCCCC--CHHHHHHHH-HcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC------
Q 019093           74 LYLTDTT--SPDEIKLAR-KTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV------  144 (346)
Q Consensus        74 ~~~~~~~--~~~el~~l~-~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~------  144 (346)
                      +  +...  ..+++.++. +.| +.+||+||++    .+....++ +.|+++|+++++.|+++.+||||.+++.      
T Consensus       123 ~--~~~~~~~l~el~~l~~~~G-~~~~k~~~~~----~~~~~~~~-~~l~~~~~~a~~~g~~v~~HaE~~~~i~~~~~~~  194 (490)
T 3dc8_A          123 I--TWWGEQVFNEMETIVKDKG-INTFKHFMAY----KGALMVDD-DEMFSSFQRCAALGALPLVHAENGDVVAQLQAKL  194 (490)
T ss_dssp             C--CSCSHHHHHHHHHHHHHSC-CCEEEEESCS----TTTTBCCH-HHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHH
T ss_pred             E--ecCcHHHHHHHHHHHHhCC-CCEEEEEecC----CCCccCCH-HHHHHHHHHHHhcCCEEEEecCChHHHHHHHHHH
Confidence            6  4321  246788888 788 7899999965    22233355 8899999999999999999999985431      


Q ss_pred             ------C--------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhh
Q 019093          145 ------D--------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNAL  208 (346)
Q Consensus       145 ------~--------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~  208 (346)
                            +        +..+|.+++.+.+  .+++.+|+|+||+|+|+++++++|+++|  |++|+||||||||+|+++++
T Consensus       195 ~~~g~~~~~~~~~~rP~~~E~~av~r~i--~la~~~g~~lhi~HvSt~~~~~li~~ak~~G~~Vt~e~~ph~l~l~~~~~  272 (490)
T 3dc8_A          195 LAEGNSGPEAHAYSRPAEVEGEAANRAI--MIADMAGCPVYIVHTSCEQAHEAIRRARAKGMRVFGEPLIQHLTLDETEY  272 (490)
T ss_dssp             HHTTCCSHHHHHHTSCHHHHHHHHHHHH--HHHHHHTCCEEESSCCSHHHHHHHHHHHHTTCCEEECCBHHHHHCCGGGG
T ss_pred             HhcCCCCccccccCCCHHHHHHHHHHHH--HHHHHhCCcEEEEeCCCHHHHHHHHHHHHCCCeEEEEEchHHheeCHHHh
Confidence                  1        1358999999999  8999999999999999999999999998  89999999999999999999


Q ss_pred             ccCCC--CCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCcccccc---CCC--CCCccchhHHHHHHHHHHH
Q 019093          209 FQGGL--RPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKEC---ACG--CAGIYNAPVALSLYAKVFE  281 (346)
Q Consensus       209 ~~~~~--~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~---~~~--~~G~~g~e~~lp~l~~~~~  281 (346)
                      ...++  ++.+|||||||+++||++||++|++|.||+ |+|||+||+.++|..   +|.  .+|++|+|++||++|+.++
T Consensus       273 ~~~~~~~~~~~~~~Pplr~~~d~~aL~~~l~~G~id~-i~sDh~p~~~~~K~~g~~~f~~~~~G~~gle~~l~~~~~~~v  351 (490)
T 3dc8_A          273 FDKDWDHAARRVMSPPFRNKLHQDSLWAGLASGSLQV-VATDHCAFTTEQKRFGVGDFTRIPNGTGGLEDRMPMLWTYGV  351 (490)
T ss_dssp             GCSCHHHHHHTCCSSCCCCGGGHHHHHHHHHHTSSCC-CBCCBCCCCHHHHGGGTTCGGGSCCCBCCTTTHHHHHHHHHT
T ss_pred             cCcCcccCCceEECCCCCChHHHHHHHHHHhcCCceE-EECCCCCCCHHHhhccCCChhhCCCChHHHHHHHHHHHHHHH
Confidence            75322  578999999999999999999999999999 999999999999864   443  3599999999999998644


Q ss_pred             h--cCCHHHHHHHHchhhhhhcCC-CCC-------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093          282 E--MGALDKLEAFTSFNGPDFYGL-PRN-------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI  346 (346)
Q Consensus       282 ~--~~~l~~lv~~~s~nPAki~gl-~~k-------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~  346 (346)
                      .  +.+++++++++|.|||++||| +++       +|||+|||  .+|+|+.++++|+++|||| +|++++|+|.++
T Consensus       352 ~~~~l~~~~~~~~~t~~~A~~~gl~~~~G~l~~G~~ADlvv~d~~~~~~i~~~~~~s~~~~sp~-~g~~~~g~v~~t  427 (490)
T 3dc8_A          352 ATGRITMNEFVAVTSTNIAKILNIYPKKGAILVGADADLVVWDPKRSKTISAKTQQSAIDYNVF-EGKTVTGLPRFT  427 (490)
T ss_dssp             TTTSSCHHHHHHHHTHHHHHHTTCTTTSSCCSTTSBCCEEEEEEEEEEECCTTTCSSSSSCCTT-TTCEEEEEEEEE
T ss_pred             HcCCCCHHHHHHHHHHHHHHHhCCCCCCCccCCCCcCCEEEEecCcceEechhhccccCCCCcc-cCcEEeeEEEEE
Confidence            4  348999999999999999999 542       89999999  7999999999999999999 799999999763

>3e74_A Allantoinase; (beta/alpha)8-barrel domain, small beta-sheet domain, hydrolase, metal-binding, purine metabolism, zinc; HET: KCX; 2.10A {Escherichia coli}

Probab=100.00  E-value=9.4e-62  Score=484.40  Aligned_cols=332  Identities=15%  Similarity=0.144  Sum_probs=276.1

Q ss_pred             eEEecCccccceecCC-CccccccccccC-----CceeEEEeCC-CCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMP-NLKPPITTTAAAVAYRESILKALPASSNFTPLMTL   74 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mP-nt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~   74 (346)
                      ++|+||+||+|+|+++ |..++|++.+++     ||+||+++|| |+.|+.++.+.++.+.+++.....  +||.+++++
T Consensus        69 ~~v~PG~iD~H~H~~~~g~~~~~~~~~~~~~~~~~G~Tt~~~~~~~t~p~~~~~~~~~~~~~~a~~~~~--~d~~~~~~~  146 (473)
T 3e74_A           69 LVVSPGMVDAHTHISEPGRSHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLT--IDAAQLGGL  146 (473)
T ss_dssp             CEEEECEEEEEECC---------CHHHHHHHHHHTTEEEEEECCSSSSSCSCSHHHHHHHHHHHTTTCS--SEEEECEEC
T ss_pred             CEEecCEEEEecccCCCCCCcHHHHHHHHHHHHhCCEEEEEcCcccCCCCcccHHHHHHHHHHhccCCe--EEEEEEeec
Confidence            4899999999999998 888889887754     9999999999 999999999988887776655443  899998876


Q ss_pred             EeCCCCCHHHHHHHHHcCCeeEEEEeecCCccC---CCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC-------
Q 019093           75 YLTDTTSPDEIKLARKTGVVFAVKLYPAGATTN---SQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV-------  144 (346)
Q Consensus        75 ~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~---~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~-------  144 (346)
                        +++ +.+++.++.+.| +.+||+||++....   .+....++ +.++++|+++++.|.++++||||..++.       
T Consensus       147 --~~~-~~~~l~~l~~~G-~~~~K~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~~~  221 (473)
T 3e74_A          147 --VSY-NIDRLHELDEVG-VVGFKCFVATCGDRGIDNDFRDVND-WQFFKGAQKLGELGQPVLVHCENALICDELGEEAK  221 (473)
T ss_dssp             --CTT-CTTTHHHHHHHT-CSCEEEEC------------CCCCH-HHHHHHHHHHHHHTCCEEEECSCHHHHHHHHHHHH
T ss_pred             --ccc-hHHHHHHHHHcC-CCEEEEeccccCCcccccccCCCCH-HHHHHHHHHHHhcCCeEEEEecCHHHHHHHhhHHH
Confidence              553 577899999889 78999999752110   12223345 7899999999999999999999874321       


Q ss_pred             -------------ChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhc
Q 019093          145 -------------DIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALF  209 (346)
Q Consensus       145 -------------~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~  209 (346)
                                   ....+|.+++.+++  .+++.+|+|+||+|+|+++++++|+++|  |.+|+||||||||+|+++++.
T Consensus       222 ~~g~~~~~~~~~~~p~~~e~~av~~~l--~la~~~g~~lhi~Hvst~~~l~li~~ak~~G~~vt~e~~ph~l~l~~~~~~  299 (473)
T 3e74_A          222 REGRVTAHDYVASRPVFTEVEAIRRVL--YLAKVAGCRLHVCHVSSPEGVEEVTRARQEGQDITCESCPHYFVLDTDQFE  299 (473)
T ss_dssp             HHTCCSHHHHHHTSCHHHHHHHHHHHH--HHHHHHTCCEEECSCCSHHHHHHHHHHHHTTCCEEEEECTHHHHCCHHHHH
T ss_pred             hcCCcChhhcccCCCHHHHHHHHHHHH--HHHHHhCCcEEEEeCCCHHHHHHHHHHHHcCCCeEEEEchHhhhcCHHHHh
Confidence                         11357889999999  8999999999999999999999999998  899999999999999999987


Q ss_pred             cCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCC--CCccchhHHHHHHHHHHHh--cCC
Q 019093          210 QGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGC--AGIYNAPVALSLYAKVFEE--MGA  285 (346)
Q Consensus       210 ~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~--~G~~g~e~~lp~l~~~~~~--~~~  285 (346)
                      .  +++.++|+||||++++|++||++|++|.+|+ |+|||+||+.++|..+|..  .|++|+|+.+|++|+.++.  ..+
T Consensus       300 ~--~~~~~~~~Pplr~~~~~~~L~~~l~~G~~~~-i~tDh~p~~~~~k~~~f~~~~~G~~g~e~~l~~~~~~~~~~~~~~  376 (473)
T 3e74_A          300 E--IGTLAKCSPPIRDLENQKGMWEKLFNGEIDC-LVSDHSPCPPEMKAGNIMKAWGGIAGLQSCMDVMFDEAVQKRGMS  376 (473)
T ss_dssp             H--HCGGGCCSSCCCCHHHHHHHHHHHHTTCCCE-ECCCBCCCCTTTTCSCTTTSCCCBCCGGGHHHHHHHHHTTTTCCC
T ss_pred             C--CCCcEEEeCCCCCHHHHHHHHHHHhCCCCcE-EEeCCCCCCHHHcccChhhcCCCcccHHhHHHHHHHHHHHcCCCC
Confidence            5  3689999999999999999999999999999 9999999999999877754  4999999999999874433  358


Q ss_pred             HHHHHHHHchhhhhhcCCCC-C------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093          286 LDKLEAFTSFNGPDFYGLPR-N------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI  346 (346)
Q Consensus       286 l~~lv~~~s~nPAki~gl~~-k------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~  346 (346)
                      +++++++++.|||++||+++ +      +|||||||  .+|+++.++++|+++|||| +|++++|+|.++
T Consensus       377 ~~~~~~~~t~~~a~~~g~~~~G~l~~G~~AD~vv~d~~~~~~~~~~~~~~~~~~sp~-~g~~~~g~v~~t  445 (473)
T 3e74_A          377 LPMFGKLMATNAADIFGLQQKGRIAPGKDADFVFIQPNSSYVLTNDDLEYRHKVSPY-VGRTIGARITKT  445 (473)
T ss_dssp             HHHHHHHHTHHHHHHTTCTTSSCCSTTSBCCEEEEESSCCEECCGGGCCSSSCCCTT-TTCEESCEEEEE
T ss_pred             HHHHHHHHhHHHHHHhCCCCCCccCCCCccCEEEEeCCCCEEECHHHccccCCCCCC-CCCEEeeEEEEE
Confidence            99999999999999999953 2      89999999  7899999999999999999 799999999863

>3gri_A Dihydroorotase, dhoase; hydrolase, IDP00795, metal-binding, pyrimidine biosynthesis, structural genomics; 2.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=5.5e-59  Score=457.87  Aligned_cols=327  Identities=20%  Similarity=0.230  Sum_probs=278.3

Q ss_pred             eEEecCccccceecCC-CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLY   75 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~   75 (346)
                      ++|+||+||+|+|+++ |..++|++.+++     ||+||+++||++.|+.++.+.++.+.+.+++...  +++.+++++.
T Consensus        48 ~~v~PG~iD~H~H~~~~g~~~~~~~~~~~~~~~~~G~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  125 (424)
T 3gri_A           48 HFVSPGFVDVHVHLREPGGEYKETIETGTKAAARGGFTTVCPMPNTRPVPDSVEHFEALQKLIDDNAQ--VRVLPYASIT  125 (424)
T ss_dssp             CEEEECEEEEEECCCTTTCTTTCCHHHHHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCS--SEECCCEESB
T ss_pred             CEEEeCeEEeeecCCCCCCCCHHHHHHHHHHHHhCCEEEEeECcCCCCCCChHHHHHHHHHHhccCCC--ceEEEEEEEe
Confidence            4899999999999998 778888887653     9999999999999999999989888888776554  6887777652


Q ss_pred             eC-CCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC------C---
Q 019093           76 LT-DTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV------D---  145 (346)
Q Consensus        76 ~~-~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~------~---  145 (346)
                      .. .+....++.++.+.| +.+|.-        .+....+. +.++++++.+++.|+++++||||.+++.      +   
T Consensus       126 ~~~~~~~l~~l~~l~~~G-~~~~~~--------~~~~~~~~-~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~~g~~~  195 (424)
T 3gri_A          126 TRQLGKELVDFPALVKEG-AFAFTD--------DGVGVQTA-SMMYEGMIEAAKVNKAIVAHCEDNSLIYGGAMHEGKRS  195 (424)
T ss_dssp             GGGCSSSBCCHHHHHTTT-CCCEEE--------CSSCCCSH-HHHHHHHHHHHHHTCCEEECCCCGGGCTTCCEESSHHH
T ss_pred             cCCCcchHHHHHHHHhcC-cEEEec--------CCcCcCCH-HHHHHHHHHHHhcCCEEEEeCCCHHHHhhhhhhcCccc
Confidence            11 112345788888888 566632        11223344 7899999999999999999999987532      1   


Q ss_pred             --------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccCCCCC
Q 019093          146 --------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQGGLRP  215 (346)
Q Consensus       146 --------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~~~~~  215 (346)
                              ...+|..++.+.+  .+++.+|+|+||+|+|+++++++|+++|  |.+|++|+|||||+|+++++..  +++
T Consensus       196 ~~~~~~~~p~~~E~~~v~r~~--~la~~~g~~~~i~H~s~~~~~~~i~~ak~~G~~v~~e~~ph~l~l~~~~~~~--~~~  271 (424)
T 3gri_A          196 KELGIPGIPNICESVQIARDV--LLAEAAGCHYHVCHVSTKESVRVIRDAKRAGIHVTAEVTPHHLLLTEDDIPG--NNA  271 (424)
T ss_dssp             HHHTCCEECTHHHHHHHHHHH--HHHHHHTCCEEECSCCCHHHHHHHHHHHHTTCCEEEEECHHHHHCCGGGCCS--SCG
T ss_pred             hhhCCCCCCHHHHHHHHHHHH--HHHHHhCCcEEEEeCCCHHHHHHHHHHHHcCCCEEEEecHHHHhcCHHHHhC--cCc
Confidence                    1357888999999  8999999999999999999999999998  8999999999999999999874  468


Q ss_pred             ceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCC--CCccchhHHHHHHHHHHHh--cCCHHHHHH
Q 019093          216 HNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGC--AGIYNAPVALSLYAKVFEE--MGALDKLEA  291 (346)
Q Consensus       216 ~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~--~G~~g~e~~lp~l~~~~~~--~~~l~~lv~  291 (346)
                      .++|+||||++++|++||++|++|.||+ |+|||+||+.++|..+|..  .|++|+|+.+|++++.++.  +.+++++++
T Consensus       272 ~~~~~Pplr~~~~~~~L~~~l~~G~i~~-igtDhap~~~~~k~~~~~~~~~G~~g~e~~~~~~~~~~~~~~~~~~~~~~~  350 (424)
T 3gri_A          272 IYKMNPPLRSTEDREALLEGLLDGTIDC-IATDHAPHARDEKAQPMEKAPFGIVGSETAFPLLYTHFVKNGDWTLQQLVD  350 (424)
T ss_dssp             GGCCSSCCCCHHHHHHHHHHHHTTSSCE-ECCCBCCCCHHHHTSCTTTSCCCCCCTTTHHHHHHHHHTTTSSCCHHHHHH
T ss_pred             eEEEeCCCCCHHHHHHHHHHHhcCCceE-EEcCCCCCCHHHccCCHhHCCCCCccccccHHHHHHHHHHcCCCCHHHHHH
Confidence            9999999999999999999999999999 9999999999999877653  5999999999999875544  358999999


Q ss_pred             HHchhhhhhcCCCCC------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093          292 FTSFNGPDFYGLPRN------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI  346 (346)
Q Consensus       292 ~~s~nPAki~gl~~k------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~  346 (346)
                      +++.|||++||++.+      +|||+|||  .+|+++.++++|+++|||| +|++++|+|.++
T Consensus       351 ~~t~~~a~~~g~~~g~l~~G~~Ad~~~~d~~~~~~~~~~~~~~~~~~sp~-~g~~~~g~v~~t  412 (424)
T 3gri_A          351 YLTIKPCETFNLEYGTLKENGYADLTIIDLDSEQEIKGEDFLSKADNTPF-IGYKVYGNPILT  412 (424)
T ss_dssp             HHTHHHHHHTTCSCSCCCTTSBCCEEEEESSCCEECCGGGCSSSCCCCTT-TTCEESCEEEEE
T ss_pred             HHhHHHHHHhCCCCCcccCCCcCCEEEEcCCCCEEEchhhcccccCCCCc-CCCEEeeeEEEE
Confidence            999999999998432      89999999  7899999999999999999 799999999763

>3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans}

Probab=100.00  E-value=7.6e-58  Score=451.96  Aligned_cols=331  Identities=15%  Similarity=0.164  Sum_probs=284.6

Q ss_pred             eEEecCccccceecCC-Ccccccccccc-----CCceeEEEeCC-CCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPHS-----VSHYGRAIVMP-NLKPPITTTAAAVAYRESILKALPASSNFTPLMTL   74 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~-----sGGvTtvv~mP-nt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~   74 (346)
                      ++|+||+||+|+|++. +..+++++.+.     .+|+||+++|| |+.|+.++.+.++.+.++++....  ++|.+++++
T Consensus        55 ~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  132 (448)
T 3hm7_A           55 LHLFPGMVDVHVHFNEPGRTEWEGFASGSKSLAAGGVTTYFDMPLNSNPPTITREELDKKRQLANEKSL--VDYRFWGGL  132 (448)
T ss_dssp             CEEEECEEEEEECCCTTTSGGGCCSHHHHHHHHTTTEEEEEECSSSSSSCSCSHHHHHHHHTHHHHHCS--SEEEEEEEC
T ss_pred             CEEecCEEEeeeccCCCCCCcHhHHHHHHHHHHhCCEEEEEeCCCCCCCCCChHHHHHHHHHHhccCCe--eEEEEEEEe
Confidence            4899999999999998 67777887664     49999999999 999999999988888887766554  899988876


Q ss_pred             EeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC----------
Q 019093           75 YLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV----------  144 (346)
Q Consensus        75 ~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~----------  144 (346)
                        +++ ..+++.++.+.| +.+||+|+.|....+.... +. +.++++++.+++.|+++++|||+..++.          
T Consensus       133 --~~~-~~~~l~~l~~~g-~~~~~~~l~~~~~~~~~~~-~~-~~l~~~l~~a~~~g~~v~vH~~~~~~~~~~~~~~~~~g  206 (448)
T 3hm7_A          133 --VPG-NIDHLQDLHDGG-VIGFKAFMSECGTDDFQFS-HD-ETLLKGMKKIAALGSILAVHAESNEMVNALTTIAIEEQ  206 (448)
T ss_dssp             --CTT-CGGGHHHHHHTT-CSEEEEESSSCSSSSSCCC-CH-HHHHHHHHHHHHHTCCEEEECCCHHHHHHHHHHHHHTT
T ss_pred             --ccc-CHHHHHHHHHcC-CCEEEEeeccccCCccCcC-CH-HHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcC
Confidence              554 578899999888 7899999976432222233 44 8899999999999999999999865421          


Q ss_pred             ----------ChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccCC
Q 019093          145 ----------DIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQGG  212 (346)
Q Consensus       145 ----------~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~~  212 (346)
                                ....+|.+++.+++  .+++.+|+|+||+|+|+++++++++++|  |.+|++|+|||||+|+++++..  
T Consensus       207 ~~~~~~~~~~~p~~~e~~av~~~~--~la~~~g~~~~i~H~s~~~~~~~i~~ak~~G~~v~~e~~ph~l~l~~~~~~~--  282 (448)
T 3hm7_A          207 RLTVKDYSEARPIVSELEAVERIL--RFAQLTCCPIHICHVSSRKVLKRIKQAKGEGVNVSVETCPHYLLFSLDEFAE--  282 (448)
T ss_dssp             CCSHHHHHHHSCHHHHHHHHHHHH--HHHHHHTCCEEECCCCCHHHHHHHHHHHHTTCCEEEEECHHHHHCCHHHHHH--
T ss_pred             CcChhhccccCCHHHHHHHHHHHH--HHHHHhCCCEEEEeCCCHHHHHHHHHHHhcCCCEEEEechHHHccCHHHhcC--
Confidence                      01347888999999  7999999999999999999999999998  8999999999999999999875  


Q ss_pred             CCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccC-CCC--CCccchhHHHHHHHHHHH-h-cCCHH
Q 019093          213 LRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECA-CGC--AGIYNAPVALSLYAKVFE-E-MGALD  287 (346)
Q Consensus       213 ~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~-~~~--~G~~g~e~~lp~l~~~~~-~-~~~l~  287 (346)
                      +++.++|+||||+++++++||+++++|.+|+ ++|||+||+.++|..+ |..  .|++|+|+.+|++++.++ . ..+++
T Consensus       283 ~~~~~~~~Pplr~~~~~~~l~~~l~~g~~~~-i~tD~~p~~~~~k~~~~~~~~~~G~~g~e~~l~~~~~~~~~~~~l~~~  361 (448)
T 3hm7_A          283 IGYLAKCAPPLRERQEVEDLWDGLMAGEIDL-ISSDHSPSLPQMKTGKTIFEVWGGIAGCQNTLAVMLTEGYHKRKMPLT  361 (448)
T ss_dssp             HCSTTCCSSCCCCHHHHHHHHHHHHHTCCCE-ECCCBCCCCGGGGCCSSTTTSCCCBCCTTTHHHHHHHHTTTTTCCCHH
T ss_pred             CCCeEEEcCCCCCHHHHHHHHHHHhcCCccE-EEeCCCCCCHHHcccCCHhhCCCCCccHHHHHHHHHHHHHhcCCcCHH
Confidence            3689999999999999999999999999999 9999999999999764 543  599999999999987544 2 35899


Q ss_pred             HHHHHHchhhhhhcCC-CCC-------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093          288 KLEAFTSFNGPDFYGL-PRN-------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI  346 (346)
Q Consensus       288 ~lv~~~s~nPAki~gl-~~k-------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~  346 (346)
                      +++++++.|||++||+ +++       +|||+|||  .+|+++.++++|+++|||| +|++++|+|.++
T Consensus       362 ~~~~~~t~~~A~~~g~~~~~g~l~~G~~Ad~~~~d~~~~~~~~~~~~~~~~~~sp~-~g~~~~g~v~~t  429 (448)
T 3hm7_A          362 QIVQLLSTEPAKRFGLYPQKGTIQVGAEASFTLIDLNESYTLNASDLYYRHPISPY-VGQRFRGKVKHT  429 (448)
T ss_dssp             HHHHHHTHHHHHHHTCTTTSSCCSTTSBCCEEEEEEEEEEECCGGGCCSSSCCCTT-TTCEEEEEEEEE
T ss_pred             HHHHHHhHHHHHHcCCCCCCCcccCCCcCCEEEEeCCCCEEEChHhcccccCCCCC-CCCEEEEEEEEE
Confidence            9999999999999999 432       89999999  7899999999999999999 799999999863

>3sfw_A Dihydropyrimidinase; hydrolase, zinc binding; HET: KCX; 1.73A {Brevibacillus agri} PDB: 1yny_A 1k1d_A*

Probab=100.00  E-value=6.5e-58  Score=454.77  Aligned_cols=331  Identities=17%  Similarity=0.141  Sum_probs=277.0

Q ss_pred             eEEecCccccceecCC---CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD---GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMT   73 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~---g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~   73 (346)
                      ++|+||+||+|+|+++   +..++|++.+++     |||||+++|||+.|+.+..+.++.+.+.+.....  +||+++++
T Consensus        48 ~~v~PG~ID~H~H~~~~~~~~~~~e~~~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~a~~~~~--~~~~~~~~  125 (461)
T 3sfw_A           48 YYLLPGGIDPHTHLDMPFGGTVTSDNFFTGTKAAAFGGTTSIVDFCLTSKGESLHSAIATWHEKARGKAV--IDYGFHLM  125 (461)
T ss_dssp             CEEEECEEEEEECTTCEETTEECSCCHHHHHHHHHHTTEEEEEEEECCCTTSCHHHHHHHHHHHHTTTCS--SEEEEEEE
T ss_pred             CEEEeeeEEeEeccCcCCCCcccHhHHHHHHHHHHhCCEEEEEccCCCCCcchHHHHHHHHHHHhhcCcE--EEEEEEEE
Confidence            4899999999999986   556788887653     9999999999999988888888877776554333  89998877


Q ss_pred             EEeCCC--CCHHHHHHHHH-cCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC------
Q 019093           74 LYLTDT--TSPDEIKLARK-TGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV------  144 (346)
Q Consensus        74 ~~~~~~--~~~~el~~l~~-~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~------  144 (346)
                      +  +..  ...+++.++.+ .| +.+||+|+++    .+....+. +.++++++++++.|+++.+|||+.+++.      
T Consensus       126 ~--~~~~~~~~~~~~~l~~~~G-~~~ik~~~~~----~~~~~~~~-~~l~~~~~~a~~~g~~v~~Hae~~~~~~~~~~~~  197 (461)
T 3sfw_A          126 V--SDANDHVLEELESVVNNEG-ITSLKVFMAY----KNVLMADD-ETLFKTLIRAKELGALVQVHAENGDVLDYLTKQA  197 (461)
T ss_dssp             C--SCCCHHHHHHHHHHHHTSC-CCEEEEESSS----TTTTBCCH-HHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHH
T ss_pred             E--eCCCHHHHHHHHHHHHhCC-CCEEEEEEec----CCCcccCH-HHHHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHH
Confidence            5  321  13457888888 88 7899999864    12223345 8899999999999999999999875421      


Q ss_pred             ---C-----------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhh
Q 019093          145 ---D-----------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNAL  208 (346)
Q Consensus       145 ---~-----------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~  208 (346)
                         +           ...+|.+++.+.+  .+++.+|+|+||+|+|+++++++|+++|  |.+|+||+|||||+|+++++
T Consensus       198 ~~~G~~~~~~~~~~~p~~~e~~av~~~~--~la~~~g~~~hi~H~s~~~~l~~i~~ak~~G~~vt~e~~ph~l~l~~~~~  275 (461)
T 3sfw_A          198 LAEGNTDPIYHAYTRPPEAEGEATGRAI--ALTALADAQLYVVHVSCADAVRRIAEAREKGWNVYGETCPQYLVLDITAL  275 (461)
T ss_dssp             HHTTCCSTHHHHHTSCHHHHHHHHHHHH--HHHHHTTCEEEECSCCSHHHHHHHHHHHHTTCEEEEEECHHHHHCCGGGG
T ss_pred             HhcCCCChhHhcccCCHHHHHHHHHHHH--HHHHHhCCCEEEEecCcHHHHHHHHHHHhcCCcEEEeeccceEEEcHHHh
Confidence               0           1347889999999  8999999999999999999999999998  89999999999999999998


Q ss_pred             ccCC-CCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccc-cc---cCCC--CCCccchhHHHHHHHHHHH
Q 019093          209 FQGG-LRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGR-KE---CACG--CAGIYNAPVALSLYAKVFE  281 (346)
Q Consensus       209 ~~~~-~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~-K~---~~~~--~~G~~g~e~~lp~l~~~~~  281 (346)
                      ...+ .++.++|+||||+++||++||++|++|.+|+ |+|||+||+.++ |.   .+|.  ..|++|+|+.+|++++.++
T Consensus       276 ~~~~~~~~~~~~~Pplr~~~~~~aL~~~l~~G~~~~-i~sD~~p~~~~~~k~~~~~~~~~~~~G~~g~e~~~~~~~~~~~  354 (461)
T 3sfw_A          276 EKPDFEGAKYVWSPPLREKWNQDVLWSALKNGILQT-VGSDHCPFNFSGQKELGRRDFTKIPNGGPIIEDRMTILFSEGV  354 (461)
T ss_dssp             GCTTTGGGGGCCSSCCCCTHHHHHHHHHHHTTSSCE-ECCCBCCCCTTTTGGGGTTCGGGSCCCBCCTTTHHHHHHHHTT
T ss_pred             cCccccCCcEEEcCCCCChHHHHHHHHHHhcCCceE-EECCCCCCCchhhhhcccCCHhhCCCCCccHHHHHHHHHHHHH
Confidence            7532 2688999999999999999999999999999 999999999544 42   3443  3599999999999987544


Q ss_pred             hc--CCHHHHHHHHchhhhhhcCC-CCC-------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093          282 EM--GALDKLEAFTSFNGPDFYGL-PRN-------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI  346 (346)
Q Consensus       282 ~~--~~l~~lv~~~s~nPAki~gl-~~k-------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~  346 (346)
                      ..  .++++++++++.|||++||+ +++       +|||+|||  .+|+++.++++|+++|||| +|++++|+|.++
T Consensus       355 ~~~~~~~~~~~~~~t~~~a~~~g~~~~~G~l~~G~~Ad~~~~d~~~~~~~~~~~~~~~~~~sp~-~g~~~~~~v~~t  430 (461)
T 3sfw_A          355 RKGKISLNQFVDITSTKVAKLFGMFPQKGTIAVGSDADIVLFDPTVQRTISVETHHMNVDYNPF-EGMQVHGDVISV  430 (461)
T ss_dssp             TTTSSCHHHHHHHHTHHHHHHHTCTTTSSSCSTTSBCCEEEEEEEEEEECCTTTCCSSSSCCTT-TTCEEEEEEEEE
T ss_pred             HcCCCCHHHHHHHHhHHHHHHcCCCCCCCccCCCCcCCEEEEcCCCCEEEchHHcccccCCCCC-CCCEecceEEEE
Confidence            43  58999999999999999999 532       89999999  7899999999999999999 799999999863

>3mpg_A Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus anthracis}

Probab=100.00  E-value=6.6e-56  Score=435.68  Aligned_cols=327  Identities=22%  Similarity=0.279  Sum_probs=276.1

Q ss_pred             eEEecCccccceecCC-CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLY   75 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~   75 (346)
                      ++|+||+||+|+|+++ +..++|++.+++     +|+||+++||++.|+.++.+.++.+.+.+++...  +++.+++.+.
T Consensus        49 ~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  126 (428)
T 3mpg_A           49 KLIAPGLVDVHVHLREPGGEHKETIETGTLAAAKGGFTTICAMPNTRPVPDCREHMEDLQNRIKEKAH--VNVLPYGAIT  126 (428)
T ss_dssp             CEEEECEEEEEECCCTTTCTTTCCHHHHHHHHHHHTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCS--SEEEECEESB
T ss_pred             CEEeeCEEEEeeccCCCCCCchhHHHHHHHHHHhCCeEEEEeCCCCCCCCCcHHHHHHHHHHhcccCC--cEEEEEeeEe
Confidence            4899999999999998 777778876643     9999999999999999888888888887776654  7887776652


Q ss_pred             eC-CCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC------C---
Q 019093           76 LT-DTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV------D---  145 (346)
Q Consensus        76 ~~-~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~------~---  145 (346)
                      .. .+....++.++.+.| +.+|.-        .+....+. +.++++++.+++.|+++++|||+..+..      +   
T Consensus       127 ~~~~~~~l~~~~~l~~~G-~~~~~~--------~~~~~~~~-~~l~~~~~~a~~~g~~v~vH~~~~~~~~~~~~~~g~~~  196 (428)
T 3mpg_A          127 VRQAGSEMTDFETLKELG-AFAFTD--------DGVGVQDA-SMMLAAMKRAAKLNMAVVAHCEENTLINKGCVHEGKFS  196 (428)
T ss_dssp             GGGCSSSBCCHHHHHHTT-CCCEEC--------TTSCCCCH-HHHHHHHHHHHHTTCCEEECCCCGGGCTTCSEETTHHH
T ss_pred             cCCCcchHHHHHHHHHhC-CEEEEC--------CCcCCCCH-HHHHHHHHHHHhcCCeEEEECCChhHhhhHHhhcCccc
Confidence            11 112345788888888 556521        12223344 7899999999999999999999976532      0   


Q ss_pred             --------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccCCCCC
Q 019093          146 --------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQGGLRP  215 (346)
Q Consensus       146 --------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~~~~~  215 (346)
                              ...+|..++.+.+  .+++.+|+++||+|+|+++++++++++|  |.+|++|+|||||+|+++++..  +++
T Consensus       197 ~~~~~~~~p~~~e~~~v~~~~--~la~~~g~~~~i~H~s~~~~~~~i~~a~~~G~~v~~e~~p~~l~l~~~~~~~--~~~  272 (428)
T 3mpg_A          197 EKHGLNGIPSVCESVHIARDI--LLAEAADCHYHVCHVSTKGSVRVIRDAKRAGIKVTAEVTPHHLVLCEDDIPS--ADP  272 (428)
T ss_dssp             HHTTCCEECTHHHHHHHHHHH--HHHHHHTCCEEECSCCCHHHHHHHHHHHHTTCCEEECBCHHHHHCCGGGCCS--SCG
T ss_pred             hhhCcCCCCHHHHHHHHHHHH--HHHHHhCCCEEEEeCCCHHHHHHHHHHHhcCCCEEEEEchHHhEECHHHHhC--CCC
Confidence                    1347888999998  7999999999999999999999999997  8999999999999999999874  468


Q ss_pred             ceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCC--CCccchhHHHHHHHHHHHhc--CCHHHHHH
Q 019093          216 HNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGC--AGIYNAPVALSLYAKVFEEM--GALDKLEA  291 (346)
Q Consensus       216 ~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~--~G~~g~e~~lp~l~~~~~~~--~~l~~lv~  291 (346)
                      .+||+||||++++|++||++|.+|.+|+ |+|||+||+.++|..+|..  .|++|+|+.+|++++.++..  .+++++++
T Consensus       273 ~~~~~Pplr~~~~~~~l~~~l~~G~i~~-i~tDh~p~~~~~k~~~~~~~p~g~~g~e~~~~~~~~~~~~~~~~~~~~~~~  351 (428)
T 3mpg_A          273 NFKMNPPLRGKEDHEALIEGLLDGTIDM-IATDHAPHTAEEKAQGIERAPFGITGFETAFPLLYTNLVKKGIITLEQLIQ  351 (428)
T ss_dssp             GGCCSSCCCCHHHHHHHHHHHHHTSSCC-BCCCBCCCCTTGGGSCTTTSCSCCCCTTTHHHHHHHHTTTTTSSCHHHHHH
T ss_pred             eEEEeCCCCCHHHHHHHHHHHhCCCCcE-EEcCCCCCCHHHcccCHhhCCCCceehhhHHHHHHHHHHHcCCCCHHHHHH
Confidence            9999999999999999999999999999 9999999999999877653  59999999999998754443  48999999


Q ss_pred             HHchhhhhhcCCCCC------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093          292 FTSFNGPDFYGLPRN------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI  346 (346)
Q Consensus       292 ~~s~nPAki~gl~~k------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~  346 (346)
                      +++.||||+||++.+      +|||+|||  .+|+++.++++++++|||| +|++++|+|.++
T Consensus       352 ~~t~~~a~~~g~~~g~i~~G~~Ad~~~~d~~~~~~~~~~~~~~~~~~~~~-~g~~~~g~v~~t  413 (428)
T 3mpg_A          352 FLTEKPADTFGLEAGRLKEGRTADITIIDLEQEEEIDPTTFLSKGKNTPF-AGWKCQGWPVMT  413 (428)
T ss_dssp             TTTHHHHHHHTCSCSCCCTTSBCCEEEEESSCCEECCGGGCSSSCCCCSC-TTCEECCEEEEE
T ss_pred             HHhHHHHHHhCCCCccccCCCcCCEEEEcCCCCEEEchhhccccCCCCCc-CCCEEeeEEEEE
Confidence            999999999998632      89999999  7899999999999999999 799999999763

>2fty_A Dihydropyrimidinase; alpha/beta barrel, beta-sandwich, hydrolase; HET: KCX; 2.40A {Lachancea kluyveri} SCOP: b.92.1.3 c.1.9.6 PDB: 2fvk_A* 2fvm_A*

Probab=100.00  E-value=5.9e-52  Score=421.52  Aligned_cols=330  Identities=12%  Similarity=0.127  Sum_probs=259.2

Q ss_pred             eEEecCccccceecCCC----ccccccccccC-----CceeEEEeCCCCC---CCCC-cHHHHHHHHHHHHhhCCCCccE
Q 019093            2 ELTLTQPDDWHLHLRDG----DLLKAVVPHSV-----SHYGRAIVMPNLK---PPIT-TTAAAVAYRESILKALPASSNF   68 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~g----~~~ke~~~s~s-----GGvTtvv~mPnt~---p~~~-~~~~~~~~~~~~~~~~~~~vd~   68 (346)
                      ++|+||+||+|+|++.+    ...+|++.+++     +||||+++||++.   |+.+ ..+.+....+..... ...+|+
T Consensus        51 ~~v~PGlID~H~H~~~~~~~~~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~  129 (559)
T 2fty_A           51 AFITPGGIDAHVHVDEPLKLLGDVVDTMEHATRSAVAGGTTTVVAFSTQDVSKKGPSALAESVKLDVDEYSEQ-TLYCDY  129 (559)
T ss_dssp             CEEEECEEECCBCCCCTTCTTSCCSCCHHHHHHHHHHTTEEEEEEEEECCTTCCSTTHHHHHHHHHHHHHTTS-CCSSEE
T ss_pred             CEEEcCEEeeccCcCccccccCCCHHHHHHHHHHHHhCcEEEEEECcCcccCCcchHHHHHHHHHHHHHHHhh-cceeEE
Confidence            48999999999999873    33567776543     9999999999876   4444 333331000222211 122798


Q ss_pred             EEEEEEEeCCCC--------CH-HHHHHHH-HcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecC
Q 019093           69 TPLMTLYLTDTT--------SP-DEIKLAR-KTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGE  138 (346)
Q Consensus        69 ~~~~~~~~~~~~--------~~-~el~~l~-~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE  138 (346)
                      .+++.+  +...        .. +++.++. +.| +.+||+|+++.    +..+ +. +.|+++++.+++.|+++.+|+|
T Consensus       130 ~~~~~~--~~~~~~~~~~g~~l~~~~~~l~~~~G-~~~iki~~~~~----~~~~-s~-e~l~~~~~~A~~~g~~v~~H~e  200 (559)
T 2fty_A          130 GLHLIL--FQIEKPSVEARELLDVQLQAAYNDYG-VSSVKMFMTYP----GLQI-SD-YDIMSAMYATRKNGFTTMLHAE  200 (559)
T ss_dssp             EEEEEC--CCCCSSHHHHHHHHHHHHHHHHHHHC-CCEEEEESSST----TTBC-CH-HHHHHHHHHHHHHTCEEEEECC
T ss_pred             Eeeeee--ccCcCCCchhhhhHHHHHHHHHHHCC-CCEEEEEecCC----CCcC-CH-HHHHHHHHHHHhCCCEEEEECC
Confidence            887765  3221        12 5566676 568 78999998642    1223 44 7899999999999999999999


Q ss_pred             CCCCCC---------C-----------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEc
Q 019093          139 VTDPIV---------D-----------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATV  196 (346)
Q Consensus       139 ~~~~~~---------~-----------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et  196 (346)
                      +...+.         +           +..+|.+++.+++  .+++.+|+|+||+|+|+.+++++|+++|  |.+|++|+
T Consensus       201 ~~~~i~~~~~~~~~~G~~~~~~~~~~~p~~~E~~av~~~i--~la~~~g~~vhi~H~s~~~~~~~i~~ak~~G~~Vt~e~  278 (559)
T 2fty_A          201 NGDMVKWMIEALEEQGLTDAYYHGVSRPSIVEGEATNRAI--TLATTMDTPILFVHVSSPQAAEVIKQAQTKGLKVYAET  278 (559)
T ss_dssp             CHHHHHHHHHHHHHTTCCSTTHHHHTSCHHHHHHHHHHHH--HHHHHTTCCEEECSCCCHHHHHHHHHHHHTTCCEEEEE
T ss_pred             ChHHHHHHHHHHHhcCCCChhhcccCCCHHHHHHHHHHHH--HHHHHhCCCEEEEcCCCHHHHHHHHHHHHcCCceEEee
Confidence            864321         1           1347888999999  7899999999999999999999999987  89999999


Q ss_pred             cchhhccchhhhc-------------------------c--CC-CCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecC
Q 019093          197 TPQHLVLNRNALF-------------------------Q--GG-LRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTD  248 (346)
Q Consensus       197 ~ph~L~l~~~~~~-------------------------~--~~-~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SD  248 (346)
                      |||||+|+++++.                         .  .+ .++.++|+||||++++|++||+++++|.+++ |+||
T Consensus       279 ~p~~l~l~~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~PplR~~~~~~~l~~~l~~G~~~~-igTD  357 (559)
T 2fty_A          279 CPQYALLSDAITRCHHHGEVESYGVGIDLSSISESPFTNPDDRFIGSKYICSPPIRPEGTQKSIWKGMNNGTFTI-VGSD  357 (559)
T ss_dssp             CHHHHHCCGGGGSCC--------CCSCCGGGCSSSTTTCTTCTTGGGGGCCSSCCCCTTSHHHHHHHHHTTSCSE-ECCC
T ss_pred             cCcccccCHHHhhccccccccccccccCccccccccccccCccccccCcEECCCCCCHHHHHHHHHHHhcCceEE-EEeC
Confidence            9999999988871                         1  11 2477899999999999999999999999999 9999


Q ss_pred             CCCCCcccc----------------ccCCC--CCCccchhHHHHHHHHHHHh--cC-CHHHHHHHHchhhhhhcCC-CC-
Q 019093          249 SAPHERGRK----------------ECACG--CAGIYNAPVALSLYAKVFEE--MG-ALDKLEAFTSFNGPDFYGL-PR-  305 (346)
Q Consensus       249 HaP~~~~~K----------------~~~~~--~~G~~g~e~~lp~l~~~~~~--~~-~l~~lv~~~s~nPAki~gl-~~-  305 (346)
                      |+|++.++|                ..+|.  ..|++|+|+++|++|+.+++  +. +++++++++|.||||+||| ++ 
T Consensus       358 ~~p~~~~~k~~~~~k~~~~~~~~~~~~~f~~~~~G~~g~e~~l~~ll~~~v~~~~l~~~~~~~~~~t~~~A~~lgl~~~~  437 (559)
T 2fty_A          358 HCSYNYYEKTSTASKHRAFDPENNKNGEFRYIPNGLPGVCTRMPLLYDYGYLRGNLTSMMKLVEIQCTNPAKVYGMYPQK  437 (559)
T ss_dssp             BCCCBSSCCSSTTBGGGGEEGGGTEESCGGGSCCCBCCTTTHHHHHHHHTTTTTSSSCHHHHHHHHTHHHHHHTTCTTTS
T ss_pred             CCCCChhhccccccccccccccccccCCHhhCCCCCccHHHHHHHHHHHHHHcCCCCCHHHHHHHHhHHHHHHhCCCCCC
Confidence            999998764                13443  35999999999999875443  46 8999999999999999999 43 


Q ss_pred             -------CCccEEEEe--c--------ceeecCCccccCCcccccCCCcEEEEEEEE
Q 019093          306 -------NTSKIKLTK--I--------PWKVPEAFSFSFGDIIPMFAGNTLEWQPSL  345 (346)
Q Consensus       306 -------kdAdlvi~d--~--------~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~  345 (346)
                             ++|||+|||  .        +|+++.++++|+++|||| +|++++|+|.+
T Consensus       438 G~i~~G~~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~s~~~~sp~-~g~~~~g~v~~  493 (559)
T 2fty_A          438 GSILPGVSDADLVIWYPDDSKKEYNSKPKLITNKLMEHNCDYTPF-EGIEIKNWPRY  493 (559)
T ss_dssp             SSCCTTTSBCCEEEECCSSCCCCCTTSCSBCCTGGGTSSCSCCTT-TTCBCSCCEEE
T ss_pred             ceeeccCCcCCEEEEeCcccccccCCccEEEchHHhcccCCCCCc-cCCEecceEEE
Confidence                   589999999  4        899999999999999999 79999999875

>2ftw_A Dihydropyrimidine amidohydrolase; (beta-alpha)8-barrel, beta-sandwich; HET: KCX; 2.05A {Dictyostelium discoideum} SCOP: b.92.1.3 c.1.9.6

Probab=100.00  E-value=9.5e-49  Score=394.80  Aligned_cols=333  Identities=13%  Similarity=0.078  Sum_probs=260.7

Q ss_pred             eEEecCccccceecCC---CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD---GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMT   73 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~---g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~   73 (346)
                      ++|+||+||+|+|++.   +...+|++.+++     ||+||+++|+.+.+.....+.++.+..++....  .+++++|..
T Consensus        56 ~~v~PGlID~H~H~~~~~~~~~~~e~~~~~~~~a~~~G~Ttv~d~~~~~~~~~~~~a~~~~~~~~~~~~--~~~~g~h~~  133 (521)
T 2ftw_A           56 KLLLPGGIDTHTHFQLPFMGTVSVDDFDIGTQAAVAGGTTFIIDFVIPTRGQSLLEAYDQWKKWADEKV--NCDYSLHVA  133 (521)
T ss_dssp             CEEEECEEEEEECTTCEETTEECSSCHHHHHHHHHHTTEEEEEEEECCCTTCCHHHHHHHHHHHHHTTC--SSEEEEEEE
T ss_pred             CEEecCEEeeecccCcCCCCccCHHHHHHHHHHHHhCCcceecCcCCCCCCcCHHHHHHHHHHHhhcCc--eeeEeeEEe
Confidence            4899999999999986   234567776543     999999998644444445666666665554322  378888876


Q ss_pred             EEeCCCCCHHHHHHHHH-cCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCC---------
Q 019093           74 LYLTDTTSPDEIKLARK-TGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPI---------  143 (346)
Q Consensus        74 ~~~~~~~~~~el~~l~~-~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~---------  143 (346)
                      .........+++.++.+ .| +.+||+|+++..   ...+ +. +.++++++.+++.|+++.+|+|+.+.+         
T Consensus       134 ~~~~~~~~~~~l~~l~~~~G-~~~~k~~~~~~~---~~~~-~~-e~l~~~~~~A~~~g~~v~vH~e~~~~~~~~~~~l~~  207 (521)
T 2ftw_A          134 ITWWSEQVSREMEILVKERG-VNSFKCFMAYKN---SFMV-TD-QEMYHIFKRCKELGAIAQVHAENGDMVFEGQKKMLE  207 (521)
T ss_dssp             CCSCCHHHHHHHHHHHHHSC-CCEEEEESSCTT---TTBC-CH-HHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHH
T ss_pred             ecCCChhHHHHHHHHHHhCC-CCEEEEEeccCC---CcCC-CH-HHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHH
Confidence            41111112356777774 67 789999986421   1223 44 789999999999999999999986421         


Q ss_pred             CCh-----------hhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhcc
Q 019093          144 VDI-----------FDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQ  210 (346)
Q Consensus       144 ~~~-----------~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~  210 (346)
                      .++           ...|.+++.+.+  .+++..++|+|++|+|+++++++|+++|  |.+|+||+|||||.++..++..
T Consensus       208 ~G~~~~~~h~~~~~~~~e~~a~~~~~--~la~~~~~p~hi~h~ss~~~~~~i~~~r~~G~~v~~e~~~~~L~~d~~~~~~  285 (521)
T 2ftw_A          208 MGITGPEGHELSRPEALEAEATNRAI--VIADSVCTPVYIVHVQSIGAADVICKHRKEGVRVYGEPIAAGLGVDGSHMWN  285 (521)
T ss_dssp             TTCCSTHHHHHHSCTHHHHHHHHHHH--HHHHHHTCCEEECSCCCHHHHHHHHHHHHTTCCEEECCBHHHHHCCGGGGGC
T ss_pred             cCCCChhhccccCcHHHHHHHHHHHH--HHHHHhCCCEEEEecCcHHHHHHHHHHHHcCCeEEEEEcchhhccCHHHhcC
Confidence            011           235666777877  7888899999999999999999999887  8899999999999999887753


Q ss_pred             CC--CCCceEEeCCCCC-hhhHHHHHHHHHcCCccEEeecCCCCCCcccccc---CCC--CCCccchhHHHHHHHHHHHh
Q 019093          211 GG--LRPHNYCLPVLKR-EIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKEC---ACG--CAGIYNAPVALSLYAKVFEE  282 (346)
Q Consensus       211 ~~--~~~~~k~~PPLR~-~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~---~~~--~~G~~g~e~~lp~l~~~~~~  282 (346)
                      ..  .++.++|+||||+ ++++++||++|.+|.+++ ++|||+||+..+|..   +|.  +.|++|+|++||.+|+.+++
T Consensus       286 ~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~g~~~~-~gsD~~~~~~~~k~~~~~~~~~~p~G~~G~e~~l~~~~~~~v~  364 (521)
T 2ftw_A          286 HDWRHAAAFVMGPPIRPDPRTKGVLMDYLARGDLDC-VGTDNCTFCADQKAMGKDDFTKIPNGVNGVEDRMSIVWENGVN  364 (521)
T ss_dssp             SSHHHHHTTCCSSCCCCCTTHHHHHHHHHHHTSSCC-CBCCBCCCCHHHHGGGTTCGGGSCCCBCCTTTHHHHHHHHHTT
T ss_pred             CCcccCcceEEcCCCCCChhhHHHHHHHhcCCCEEE-EEeCCCCCCHHHhhcccCChhhCCCCCccHHHHHHHHHHHHHh
Confidence            21  1356789999999 889999999999999999 999999999877753   343  35999999999999876655


Q ss_pred             c--CCHHHHHHHHchhhhhhcCC-CCC-------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093          283 M--GALDKLEAFTSFNGPDFYGL-PRN-------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI  346 (346)
Q Consensus       283 ~--~~l~~lv~~~s~nPAki~gl-~~k-------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~  346 (346)
                      .  .+++++++++|.||||+||| +++       +|||||||  ..|+++.+.++|+++|||| +|++++|+|.++
T Consensus       365 ~~~l~~~~~~~~~t~~~A~~~gl~~~~G~i~~G~~ADlvv~d~~~~~~i~~~~~~~~~~~~p~-~g~~~~g~v~~v  439 (521)
T 2ftw_A          365 TGKLTWCQFVRATSSERARIFNIYPRKGRIDVGCDGDIVIWDPNQSKTISKDTHHHAVDFNIF-EGIKVTGIAVTT  439 (521)
T ss_dssp             TTSSCHHHHHHHHTHHHHHHTTCTTTSSCCSTTSBCCEEEEEEEEEEECCTTTCCCSSSCCTT-TTCEEEEEEEEE
T ss_pred             cCCCCHHHHHHHhChhHHHHhCCCCCCCCcCCCCcCCEEEEeCCCCEEEChHHccccCCCCCc-CCCEeeeeEEEE
Confidence            3  58999999999999999999 443       89999999  6799999999999999999 799999998753

>2gwn_A Dihydroorotase; zinc-binding prote structural genomics, PSI, protein structure initiative, MID center for structural genomics, MCSG; HET: KCX GOL; 1.85A {Porphyromonas gingivalis}

Probab=100.00  E-value=1.4e-47  Score=379.49  Aligned_cols=327  Identities=19%  Similarity=0.198  Sum_probs=267.4

Q ss_pred             eEEecCccccceecCC-CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLY   75 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~   75 (346)
                      ++|+||+||+|+|+++ +..++|++.+++     +||||+++||++.|+.++.+.++.+.+++...+.  +||++++++ 
T Consensus        56 ~~v~PGlID~H~H~~~~~~~~~e~~~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-  132 (452)
T 2gwn_A           56 LRLFPGCIDDQVHFREPGLTHKATIASESRAAVAGGVTSFMDMPNTNPPTTMWERLLEKRQIGADTAW--ANYGFFFGG-  132 (452)
T ss_dssp             CEEEECEEEEEECCCTTTCTTTCCHHHHHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCS--SEEEECEEC-
T ss_pred             CEEecCEEeeccccCCCCCCcHHHHHHHHHHHHhCCeEEEEcCCCCCCCCChHHHHHHHHHHhhccCc--ccEEEEEee-
Confidence            4799999999999998 555677776543     9999999999999988888988888887776655  899988775 


Q ss_pred             eCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC-----------
Q 019093           76 LTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV-----------  144 (346)
Q Consensus        76 ~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~-----------  144 (346)
                       +++ ..+++.++.+.| +.++|+|+++..  .+.+..+. ..+++.++++   +.++.+|+|+.+++.           
T Consensus       133 -~~~-~~~~i~~~~~~g-~~g~k~~~~~~~--~~~~~~~~-~~~~~~~~~~---~~~~~~h~~~~~~~~~~~~~~~~~~G  203 (452)
T 2gwn_A          133 -TND-NIDEIKRVDKHL-VPGLKLFLGSST--GNMLVDNK-ETLEKIFGEC---DLLIATHCEKEEIIRANKEHYKAKYG  203 (452)
T ss_dssp             -CSS-CHHHHHTCCTTS-CSCEEEESSSCC--GGGBCCCH-HHHHHHHHHC---CSCEEEECCCHHHHHHHHHHHHHHHC
T ss_pred             -cCC-CHHHHHHHHHcC-CCEEEEEeccCC--CCcccCCH-HHHHHHHHHc---CCEEEEcCCCHHHHHhHHhhhhhhcC
Confidence             554 577787777667 789999986521  12233454 5666666554   888999999854321           


Q ss_pred             ---C--------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHc--c-CCCeeEEEccchhhccchhhhcc
Q 019093          145 ---D--------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVES--C-KEGFVAATVTPQHLVLNRNALFQ  210 (346)
Q Consensus       145 ---~--------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~--a-kg~~vt~Et~ph~L~l~~~~~~~  210 (346)
                         .        ...+|.+++.+++  .+|+..|+++|++|+|++++++.+++  + +..+|++|++|||++++++++..
T Consensus       204 ~~~~~~~h~~~~~~~~~~~~l~~~~--~la~~~g~~v~i~H~~~~~~~~~~~~~~a~~~~~v~~~~~~h~~~l~~~~~~~  281 (452)
T 2gwn_A          204 NDLDIHFHPLIRSEEACYRSSAEAV--ELAERMNARLHILHLSTEKELSLFRNDIPTAQKRITSEVCVHHLWFSDTDYGR  281 (452)
T ss_dssp             SCCCGGGHHHHSCHHHHHHHHHHHH--HHHHHHTCCEEECCCCCTGGGGGSCCSSCGGGCSEEEEEEHHHHHCCGGGHHH
T ss_pred             cccchhhccccCChHHHHHHHHHHH--HHHHHhCCCEEEEeCCCHHHHHHHHHhhcccCCCeEEEEchHHhhcCHHHHhc
Confidence               1        1245677888888  78999999999999999999999988  3 52378999999999999998865


Q ss_pred             CCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCC--CCccchhHHHHHHHHHHHh-cCCHH
Q 019093          211 GGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGC--AGIYNAPVALSLYAKVFEE-MGALD  287 (346)
Q Consensus       211 ~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~--~G~~g~e~~lp~l~~~~~~-~~~l~  287 (346)
                        .|+.++++||+|..+++..||+++++|.+++ +||||+|++..+|..++..  +|++|+|++++++++...+ ..+++
T Consensus       282 --~g~~~~~~P~lr~~~~~~~l~~~l~~Gv~~~-lgTD~~~~~~~~k~~~~~~~~~g~~~~e~~~~~~~~~~~~~~ls~~  358 (452)
T 2gwn_A          282 --LGNRIKWNPAIKKESDREALRAAVRNGRIDI-IATDHAPHLLREKEGSCLQAASGGPLVQHSLLALLELCNQGIFSIE  358 (452)
T ss_dssp             --HGGGGCCSSCCCCHHHHHHHHHHHHHSSSCE-EECCBCCCCHHHHCSCTTTSCCCCCCTTTHHHHHHHHHHTTSSCHH
T ss_pred             --cCceEEECCCCCCHHHHHHHHHHHHCCCceE-EEeCCCCCChHHhcCChhhCCCCCccHHHHHHHHHHHHHcCCCCHH
Confidence              3588999999999999999999999999999 9999999998877665543  5999999999998764333 45899


Q ss_pred             HHHHHHchhhhhhcCCCC-C------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093          288 KLEAFTSFNGPDFYGLPR-N------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI  346 (346)
Q Consensus       288 ~lv~~~s~nPAki~gl~~-k------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~  346 (346)
                      +++++++.||||+||+++ +      +|||+|+|  ..|.++.++++++..|+|| +|++++|+|.++
T Consensus       359 ~~l~~~T~~~A~~lgl~~~G~l~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~v~~v  425 (452)
T 2gwn_A          359 EIVSKTAHIPATLFAIEKRGYIRPGYYADLVLVDPSSPHTVSADNILSLCGWSPF-EGFTFSHSVAYT  425 (452)
T ss_dssp             HHHHHHTHHHHHHHTBTTCSSCCTTSBCCEEEEETTSCEECCTTTCCSTTCCCTT-TTCEESCEEEEE
T ss_pred             HHHHHHhHhHHHHcCCCCCCcccCCCcCCEEEEcCCCCeEECHHHccccCCCCCC-CCcEEeeeEEEE
Confidence            999999999999999953 2      89999999  5799999999999999999 799999998764

>2vr2_A Dihydropyrimidinase; hydantoinase, metal-binding, disease mutation, dihydropyrimi amidohydrolase, nucleotide metabolism, DPYS, dhpase, hydrolase; 2.80A {Homo sapiens}

Probab=100.00  E-value=4.5e-47  Score=384.24  Aligned_cols=333  Identities=14%  Similarity=0.085  Sum_probs=260.1

Q ss_pred             eEEecCccccceecCC---Ccccccccccc-----CCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD---GDLLKAVVPHS-----VSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMT   73 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~---g~~~ke~~~s~-----sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~   73 (346)
                      ++|+||+||+|+|++.   +...+|++.++     .|||||+++|+.+.+.....+.++.+..+.....  .+++++|+.
T Consensus        79 ~~V~PG~ID~H~Hl~~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~a~~~~~~~~~~~~--~~~~g~h~~  156 (541)
T 2vr2_A           79 KLVLPGGIDTHTHMQFPFMGSRSIDDFHQGTKAALSGGTTMIIDFAIPQKGGSLIEAFETWRSWADPKV--CCDYSLHVA  156 (541)
T ss_dssp             SEEEECEEEEEECTTCBCSSSBCSCCTTHHHHHHHTTTEEEEEEEECCCTTCCHHHHHHHHHHHHTTTC--SSEEEEEEE
T ss_pred             CEEccCEEEecccCCCCCCCCcCHHHHHHHHHHHHhCCeeeeccccCCCCCCCHHHHHHHHHHHhccCc--eEEEeeeec
Confidence            4899999999999986   23456777654     3999999998755444555666666655543322  378988876


Q ss_pred             EEeCCCCCHHHHHHHHH-cCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCC---------
Q 019093           74 LYLTDTTSPDEIKLARK-TGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPI---------  143 (346)
Q Consensus        74 ~~~~~~~~~~el~~l~~-~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~---------  143 (346)
                      +........+++.++.+ .| +.+||+|+++..   ...+ +. +.++++++.+++.|+++.+|+|+...+         
T Consensus       157 ~~~~~~~~~~el~~l~~~~G-~~~~k~~~~~~~---~~~~-~~-~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~  230 (541)
T 2vr2_A          157 VTWWSDQVKEEMKILVQDKG-VNSFKMFMAYKD---LYMV-TD-LELYEAFSRCKEIGAIAQVHAENGDLIAEGAKKMLA  230 (541)
T ss_dssp             ECSCSHHHHHHHHHHHHTSC-CCEEEEESSSTT---TTBC-CH-HHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHH
T ss_pred             ccCCCHHHHHHHHHHHHhCC-CCEEEEEeccCC---ccCC-CH-HHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHH
Confidence            51111112356777775 57 789999986421   1223 44 789999999999999999999985321         


Q ss_pred             CC-----------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhcc
Q 019093          144 VD-----------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQ  210 (346)
Q Consensus       144 ~~-----------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~  210 (346)
                      .+           ....|..++.+.+  .+++..++|+|++|+|+++++++|+++|  |..|+||+|||||.++..++..
T Consensus       231 ~G~~~~~~h~~~~~~~~e~~a~~~~~--~la~~~~~p~~~~h~ss~~~~~~i~~ar~~G~~v~~e~~~~~L~~d~~~~~~  308 (541)
T 2vr2_A          231 LGITGPEGHELCRPEAVEAEATLRAI--TIASAVNCPLYIVHVMSKSAAKVIADARRDGKVVYGEPIAASLGTDGTHYWN  308 (541)
T ss_dssp             TTCCSTHHHHHTSCHHHHHHHHHHHH--HHHHHHTCCEEEEEECCHHHHHHHHHHHHTTCCEEEEEBHHHHHCCSGGGGC
T ss_pred             cCCCChhhccccchhHHHHHHHHHHH--HHHHHhCCCEEEEeCCCHHHHHHHHHHHHcCCeEEEEeehhhhcCCHHHhcC
Confidence            01           1235666777777  7888999999999999999999998876  8889999999999999876642


Q ss_pred             CC--CCCceEEeCCCCC-hhhHHHHHHHHHcCCccEEeecCCCCCCcccccc---CCC--CCCccchhHHHHHHHHHHHh
Q 019093          211 GG--LRPHNYCLPVLKR-EIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKEC---ACG--CAGIYNAPVALSLYAKVFEE  282 (346)
Q Consensus       211 ~~--~~~~~k~~PPLR~-~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~---~~~--~~G~~g~e~~lp~l~~~~~~  282 (346)
                      ..  .+..++|+||||+ ++++++||+++.+|.+++ ++|||+||+..+|..   +|.  +.|++|+|+.++.+|+.+++
T Consensus       309 ~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~g~~~~-~gtD~~~~~~~~k~~~~~~~~~~p~G~~G~e~~l~~~~~~~v~  387 (541)
T 2vr2_A          309 KEWHHAAHHVMGPPLRPDPSTPDFLMNLLANDDLTT-TGTDNCTFNTCQKALGKDDFTKIPNGVNGVEDRMSVIWEKGVH  387 (541)
T ss_dssp             SSHHHHHTTCCSSCCCSCTTHHHHHHHHHHTTSSCC-CBCCBCCCCHHHHGGGSSCGGGSCCCBCCTTTHHHHHHHHHTT
T ss_pred             ccccccCceEECCCCCCCcchHHHHHHHHhcCCeEE-EEeCCCCCChHHhcccCCChhhCCCCCccHHHHHHHHHHHHHH
Confidence            11  1246789999998 789999999999999999 999999999887753   333  25999999999999876555


Q ss_pred             c--CCHHHHHHHHchhhhhhcCC-CCC-------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093          283 M--GALDKLEAFTSFNGPDFYGL-PRN-------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI  346 (346)
Q Consensus       283 ~--~~l~~lv~~~s~nPAki~gl-~~k-------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~  346 (346)
                      .  .+++++++++|.||||+||| +++       +|||+|||  ..|+++.+.++|+++|+|| +|++++|+|.++
T Consensus       388 ~~~l~~~~~~~~~T~~pA~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~p~-~g~~~~g~v~~v  462 (541)
T 2vr2_A          388 SGKMDENRFVAVTSTNAAKIFNLYPRKGRIAVGSDADIVIWDPKGTRTISAKTHHQAVNFNIF-EGMVCHGVPLVT  462 (541)
T ss_dssp             TTSSCHHHHHHHHTHHHHHHTTCTTTSSCCSTTSBCCEEEEEEEEEEECCTTTCSSSCSCCTT-TTCEEEEEEEEE
T ss_pred             cCCCCHHHHHHHHhHHHHHHhCCCCCCCccCCCCCCCEEEEcCCcCeEeCHHHhhcccCCCcc-CCCEEeeeEEEE
Confidence            4  48999999999999999999 442       89999999  6799999999999999999 799999998753

>2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus}

Probab=100.00  E-value=6.4e-46  Score=362.56  Aligned_cols=325  Identities=25%  Similarity=0.252  Sum_probs=260.6

Q ss_pred             eEEecCccccceecCC-Ccccccccccc-----CCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPHS-----VSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLY   75 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~-----sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~   75 (346)
                      ++|+||+||+|+|+.. +..+.+++.+.     .+||||+++|+++.|+.++.+.++...+.+++...  +++.+++++ 
T Consensus        45 ~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-  121 (426)
T 2z00_A           45 CFLAPGFLDLHAHLREPGEEVKEDLFSGLLAAVRGGYTDLVSMPNTKPPVDTPEAVRALKEKAKALGL--ARLHPAAAL-  121 (426)
T ss_dssp             CEEEECEEEEEECCCTTTCTTTCCHHHHHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHTS--SEECCEECS-
T ss_pred             CEEecCEEEeccccCCCCCCchHHHHHHHHHHHhCCccEEEecCCCCCCcChHHHHHHHHHHhcccCc--ccEEEEEEe-
Confidence            4799999999999987 65556666543     39999999999888877777777777766655432  576555443 


Q ss_pred             eCC---CCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC------C-
Q 019093           76 LTD---TTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV------D-  145 (346)
Q Consensus        76 ~~~---~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~------~-  145 (346)
                       ++   +...+++.++.+.| +.+|+-.        .....+. +.+.++++.+++.|+++.+|+++.....      + 
T Consensus       122 -~~~~~~~~~~~~~~l~~~g-~~~i~~~--------~~~~~~~-~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~g~  190 (426)
T 2z00_A          122 -TEKQEGKTLTPAGLLREAG-AVLLTDD--------GRTNEDA-GVLAAGLLMAAPLGLPVAVHAEDAGLRRNGVMNDGP  190 (426)
T ss_dssp             -BGGGCSSSBCCHHHHHHHT-CCEEECT--------TSCCCCH-HHHHHHHHHHGGGTCCEEECCCCHHHHTTCSEECSH
T ss_pred             -ecCCChhhHHHHHHHHHcC-CEEEECC--------CcCCCCH-HHHHHHHHHHHhhCCEEEEeCCCHHHHhhhhhccCc
Confidence             22   12345677777778 5677621        1112244 7899999999999999999999754211      0 


Q ss_pred             ----------hhhhHHHHHHHHHHHHHHhC------CCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhh
Q 019093          146 ----------IFDREKVFIDTILQPLIQRL------PQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNA  207 (346)
Q Consensus       146 ----------~~~~E~~av~~~l~~~la~~------~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~  207 (346)
                                ...+|..++.+.+  .+++.      .|+++||.|+++.++++++++++  |.+|++++||||++++.++
T Consensus       191 ~~~~~g~~~~~~~~e~~~~~~~~--~~a~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~  268 (426)
T 2z00_A          191 LADLLGLPGNPPEAEAARIARDL--EVLRYALRRSPATPRLHVQHLSTKRGLELVREAKRAGLPVTAEATPHHLTLTEEA  268 (426)
T ss_dssp             HHHHHTCCEECHHHHHHHHHHHH--HHHHHHHHHCSSCCCEEETTCCCHHHHHHHHHHHHTTCCEEEEECHHHHHCCGGG
T ss_pred             cchhcccccCChHHHHHHHHHHH--HHHhhccccccCCCcEEEEeCCCHHHHHHHHHHHHcCCCEEEEEchHHhEeCHhH
Confidence                      0235777777777  56776      89999999999999999999877  7899999999999999888


Q ss_pred             hccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCC--CCCccchhHHHHHHHHHHH--hc
Q 019093          208 LFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACG--CAGIYNAPVALSLYAKVFE--EM  283 (346)
Q Consensus       208 ~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~--~~G~~g~e~~lp~l~~~~~--~~  283 (346)
                      +..  ++..++++||+|++++|++||+++.+|.+++ ++|||+|++..+|..+|.  +.|++++|+++|.++...+  ++
T Consensus       269 ~~~--~~~~~~~~~plr~~~~~~~l~~~l~~G~~~~-lgsD~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  345 (426)
T 2z00_A          269 LRT--FDPLFKVAPPLRGEEDREALLEGLLDGTLDA-IATDHAPHTLAEKEKDLLRAPFGIPSLEVAFPLLYTELHLKRG  345 (426)
T ss_dssp             GGG--CCGGGCCSSCCCCHHHHHHHHHHHHHTSSCE-ECCCBCCCCTTGGGSCTTTSCCCBCCTTTHHHHHHHHTHHHHC
T ss_pred             hhc--cCceEEEeCCCCCHHHHHHHHHHHhCCCcEE-EecCCCCCCHHHccCChhhCCCCcccHHHHHHHHHHHHHHcCC
Confidence            753  4578899999999999999999999999999 999999999888876664  3599999999999876333  34


Q ss_pred             CCHHHHHHHHchhhhhhcCCCCC------CccEEEEe-cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093          284 GALDKLEAFTSFNGPDFYGLPRN------TSKIKLTK-IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI  346 (346)
Q Consensus       284 ~~l~~lv~~~s~nPAki~gl~~k------dAdlvi~d-~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~  346 (346)
                      .++++++++++.|||++||++.+      +|||+|+| .+|+++.++++++++|+|| +|+.++|+|.++
T Consensus       346 ls~~~~l~~~T~n~A~~lgl~~G~l~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~p~-~g~~~~~~v~~t  414 (426)
T 2z00_A          346 FPLQRLVELFTDGPRRVLGLPPLHLEEGAEASLVLLSPKERPVDPSAFASKARYSPW-AGWVLGGWPVLT  414 (426)
T ss_dssp             CCHHHHHHHHTHHHHHHHTCCCCCSSTTSBCCEEEEECCCEECCGGGCSSSCCCCTT-TTCEECCEEEEE
T ss_pred             CCHHHHHHHHhhhHHHHhCCCcccccCCCCCCEEEEeCCcEEEcHHHccccCCCCCc-CCCEEEEEEEEE
Confidence            79999999999999999998632      89999999 8999999999999999999 799999998763

>1gkp_A Hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX EPE; 1.29A {Thermus SP} SCOP: b.92.1.3 c.1.9.6 PDB: 1gkq_A*

Probab=100.00  E-value=2.8e-46  Score=368.76  Aligned_cols=333  Identities=15%  Similarity=0.116  Sum_probs=261.4

Q ss_pred             eEEecCccccceecCC---Ccccccccccc-----CCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD---GDLLKAVVPHS-----VSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMT   73 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~---g~~~ke~~~s~-----sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~   73 (346)
                      ++|+||+||+|+|++.   +...+|++.++     .+||||+++|+++.|+....+.++.+.+.......  ++++++..
T Consensus        48 ~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  125 (458)
T 1gkp_A           48 KYVFPGFIDPHVHIYLPFMATFAKDTHETGSKAALMGGTTTYIEMCCPSRNDDALEGYQLWKSKAEGNSY--CDYTFHMA  125 (458)
T ss_dssp             SEEEECEEEEEECSSCEETTEECSCCHHHHHHHHHHTTEEEEEEEECCCTTSCHHHHHHHHHHHHTTTCS--SEEEEEEE
T ss_pred             CEEecCEEecccCCCcCCCCCcCHhHHHHHHHHHHhCCccEEEeCCCCCCCCCHHHHHHHHHHHhccCce--eeEEEEEe
Confidence            4899999999999986   33456777543     39999999999877766667777766554333222  78887765


Q ss_pred             EEeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCC---------C
Q 019093           74 LYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPI---------V  144 (346)
Q Consensus        74 ~~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~---------~  144 (346)
                      .........+++.++.+.| +.++|+|+++..   ...+ +. +.+.++++.+++.|+++.+|+|+...+         .
T Consensus       126 ~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~---~~~~-~~-~~l~~~~~~a~~~~~~v~~H~e~~~~~~~~~~~~~~~  199 (458)
T 1gkp_A          126 VSKFDEKTEGQLREIVADG-ISSFKIFLSYKN---FFGV-DD-GEMYQTLRLAKELGVIVTAHCENAELVGRLQQKLLSE  199 (458)
T ss_dssp             CCCCCTTHHHHHHHHHHTT-CCEEEEEECSTT---TTBC-CH-HHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHT
T ss_pred             ecCCchhhHHHHHHHHHhC-CCEEEEEeccCC---CcCC-CH-HHHHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHhc
Confidence            4111111356788888888 789999986521   1223 44 789999999999999999999975421         0


Q ss_pred             C-----------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccC
Q 019093          145 D-----------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQG  211 (346)
Q Consensus       145 ~-----------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~  211 (346)
                      +           ...+|.+++.+.+  .+++..|+++|++|+|+.++++.|+.+|  |..|+||+|||||+++.+++...
T Consensus       200 G~~~~~~~~~~~p~~~~~~~~~~~~--~~~~~~g~~~~~~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~~~  277 (458)
T 1gkp_A          200 GKTGPEWHEPSRPEAVEAEGTARFA--TFLETTGATGYVVHLSCKPALDAAMAAKARGVPIYIESVIPHFLLDKTYAERG  277 (458)
T ss_dssp             TCCSGGGTTTTSCHHHHHHHHHHHH--HHHHHHTCEEEECSCCSHHHHHHHHHHHHTTCCEEEEEEHHHHHCCGGGGGSC
T ss_pred             CCCChhhccCcCCHHHHHHHHHHHH--HHHHHhCCCEEEEeCCCHHHHHHHHHHHHcCCeEEEEecccceeeCHHHhccc
Confidence            1           1235667788888  6888899999999999999999998776  88999999999999998887421


Q ss_pred             C-CCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCcccccc---CCC--CCCccchhHHHHHHHHHHHhc--
Q 019093          212 G-LRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKEC---ACG--CAGIYNAPVALSLYAKVFEEM--  283 (346)
Q Consensus       212 ~-~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~---~~~--~~G~~g~e~~lp~l~~~~~~~--  283 (346)
                      + .+..++++||+|.+.++++||+++.+|.+++ ++|||+|++..+|..   .+.  ..|++|+|+.+++++...++.  
T Consensus       278 ~~~g~~~~~~~p~r~~~~~~~l~~~~~~G~~~~-~gtD~~~~~~~~k~~~~~~~~~~~~g~~g~~~~l~~~~~~~~~~~~  356 (458)
T 1gkp_A          278 GVEAMKYIMSPPLRDKRNQKVLWDALAQGFIDT-VGTDHCPFDTEQKLLGKEAFTAIPNGIPAIEDRVNLLYTYGVSRGR  356 (458)
T ss_dssp             HHHHHTTCCSSCCCCTHHHHHHHHHHHTTSSCE-EECCBCCCCHHHHGGGSSCGGGSCCCBCCTTTHHHHHHHHHTTSSS
T ss_pred             ccCCcceEEeCCCCCHHHHHHHHHHHhcCCeeE-EECCCCCCCHHHhhcccCChhhCCCCcccHHHHHHHHHHHHHHcCC
Confidence            0 1346789999999999999999999999999 999999998776642   232  359999999999998755543  


Q ss_pred             CCHHHHHHHHchhhhhhcCC-CCC-------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093          284 GALDKLEAFTSFNGPDFYGL-PRN-------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI  346 (346)
Q Consensus       284 ~~l~~lv~~~s~nPAki~gl-~~k-------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~  346 (346)
                      .+++++++++|.||||+||| +++       +|||+|||  ..|.++.++++++.+|+|| +|+++.|+|.++
T Consensus       357 ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~p~-~g~~~~~~v~~v  428 (458)
T 1gkp_A          357 LDIHRFVDAASTKAAKLFGLFPRKGTIAVGSDADLVVYDPQYRGTISVKTQHVNNDYNGF-EGFEIDGRPSVV  428 (458)
T ss_dssp             CCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEEETTCCEECCGGGCCSSSSCCTT-TTCEESCEEEEE
T ss_pred             CCHHHHHHHHhhCHHHHhCCCCCCCcCCCCCcCCEEEEeCCCCeEEchHHcccccCCCcc-CCCEEeeEEEEE
Confidence            58999999999999999999 442       89999999  7799999999999999999 799999998764

>1gkr_A Hydantoinase, non-ATP dependent L-selective hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX; 2.60A {Arthrobacter aurescens} SCOP: b.92.1.3 c.1.9.6

Probab=100.00  E-value=1.5e-44  Score=355.99  Aligned_cols=330  Identities=17%  Similarity=0.180  Sum_probs=264.1

Q ss_pred             eEEecCccccceecCC-C-cccccccccc-----CCceeEEEeCC-CCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-G-DLLKAVVPHS-----VSHYGRAIVMP-NLKPPITTTAAAVAYRESILKALPASSNFTPLMT   73 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g-~~~ke~~~s~-----sGGvTtvv~mP-nt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~   73 (346)
                      ++|+||+||+|+|+.+ + ....|++.++     .+||||+++|| ++.|...+.+.++...+.+....   +++.++.+
T Consensus        50 ~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~  126 (458)
T 1gkr_A           50 KFVMPGVVDEHVHIIDMDLKNRYGRFELDSESAAVGGITTIIEMPITFPPTTTLDAFLEKKKQAGQRLK---VDFALYGG  126 (458)
T ss_dssp             CEEEECEEEEEEECCCGGGTTTSCCHHHHHHHHHHHTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCS---SEEEEEEE
T ss_pred             CEEecCEEEeeecccCCCCCCchhHHHHHHHHHHcCCEEEEEeCCCCCCCCCCcHHHHHHHHHHhhhCc---eeEEEEec
Confidence            4899999999999987 5 4455666543     38999999999 88877777777777766555432   67877765


Q ss_pred             EEeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC---------
Q 019093           74 LYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV---------  144 (346)
Q Consensus        74 ~~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~---------  144 (346)
                      .  .++ ..+++.++.+.| +.++|+|+++... ......+. +.+.++++.+++.|+++.+|+|+...+.         
T Consensus       127 ~--~~~-~~~~~~~~~~~g-~~~i~~~~~~~~~-~~~~~~~~-~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~  200 (458)
T 1gkr_A          127 G--VPG-NLPEIRKMHDAG-AVGFKSMMAASVP-GMFDAVSD-GELFEIFQEIAACGSVIVVHAENETIIQALQKQIKAA  200 (458)
T ss_dssp             C--CTT-CHHHHHHHHHTT-CCEEEEESSCSBT-TTBCBCCH-HHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHHT
T ss_pred             c--CCC-CHHHHHHHHHcC-CcEEEEeecccCC-CCcccCCH-HHHHHHHHHHHHcCCEEEEECCCHHHHHHHHHHHhhc
Confidence            4  333 577888888888 7899999865321 11122344 7899999999999999999999754210         


Q ss_pred             Ch-----------hhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccC
Q 019093          145 DI-----------FDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQG  211 (346)
Q Consensus       145 ~~-----------~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~  211 (346)
                      +.           ..+|..++.+.+  .+++..|+++|++|+|+.++++.++++|  |.++++|+||||+.++++++.. 
T Consensus       201 G~~~~~~h~~~~~~~~~~~~~~~~~--~la~~~g~~~h~~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~~-  277 (458)
T 1gkr_A          201 GGKDMAAYEASQPVFQENEAIQRAL--LLQKEAGCRLIVLHVSNPDGVELIHQAQSEGQDVHCESGPQYLNITTDDAER-  277 (458)
T ss_dssp             TCCSHHHHHHHSCHHHHHHHHHHHH--HHHHHHCCEEEECCCCSHHHHHHHHHHHHTTCCEEEEECHHHHSCCGGGHHH-
T ss_pred             CccchhhccccCCHHHHHHHHHHHH--HHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCcEEEEEchHHheeCHHHhhc-
Confidence            10           124566777777  6788889999999999999999998865  7789999999999999988764 


Q ss_pred             CCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccc---cCCC--CCCccchhHHHHHHHHHHHh--cC
Q 019093          212 GLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKE---CACG--CAGIYNAPVALSLYAKVFEE--MG  284 (346)
Q Consensus       212 ~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~---~~~~--~~G~~g~e~~lp~l~~~~~~--~~  284 (346)
                       .+..++++||+|...++++||+++.+|.+++ ++|||+|++..+|.   .++.  ..|++|.|+.++.++..+++  ..
T Consensus       278 -~~~~~~~~pp~r~~~~~~~l~~~~~~G~~~~-lgtD~~~~~~~~k~~g~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~l  355 (458)
T 1gkr_A          278 -IGPYMKVAPPVRSAEMNIRLWEQLENGLIDT-LGSDHGGHPVEDKEPGWKDVWKAGNGALGLETSLPMMLTNGVNKGRL  355 (458)
T ss_dssp             -HGGGGCCSSCCCCHHHHHHHHHHHHHTCCCE-ECCCEECCCGGGTGGGGTCGGGSCCCBCCTTTHHHHHHHHTGGGTSS
T ss_pred             -cCceEEEcCCCCCHHHHHHHHHHHhCCCceE-EEeCCCCCChHHhccccCCHhHCCCCcccHHHHHHHHHHHHHHhCCC
Confidence             3467899999999999999999999999999 99999999988776   3332  25999999999988764444  35


Q ss_pred             CHHHHHHHHchhhhhhcCCC-CC-------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093          285 ALDKLEAFTSFNGPDFYGLP-RN-------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI  346 (346)
Q Consensus       285 ~l~~lv~~~s~nPAki~gl~-~k-------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~  346 (346)
                      ++++++++++.||||+||+. ++       +|||+|||  ..|.++.+++.++..|||| +|++++|+|.++
T Consensus       356 ~~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~v~~v  426 (458)
T 1gkr_A          356 SLERLVEVMCEKPAKLFGIYPQKGTLQVGSDADLLILDLDIDTKVDASQFRSLHKYSPF-DGMPVTGAPVLT  426 (458)
T ss_dssp             CHHHHHHHHTHHHHHHHTCTTTSSSCCTTSBCCEEEEESCCCEECCGGGCSSSCCCCTT-TTCEECCEEEEE
T ss_pred             CHHHHHHHHhhhHHHHhCCCCCCccCCCCCcCCEEEEcCCcceEEcHHHccccCCCCCc-CCCEeeeEEEEE
Confidence            89999999999999999994 32       89999999  5699999999999999999 799999988763

>1nfg_A D-hydantoinase; TIM barrel, hydrolase; HET: KCX; 2.70A {Ralstonia pickettii} SCOP: b.92.1.3 c.1.9.6

Probab=100.00  E-value=7.8e-44  Score=351.43  Aligned_cols=330  Identities=12%  Similarity=0.103  Sum_probs=261.6

Q ss_pred             eEEecCccccceecCC--Ccc-cccccccc-----CCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD--GDL-LKAVVPHS-----VSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMT   73 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~--g~~-~ke~~~s~-----sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~   73 (346)
                      ++|+||+||+|+|++.  +.. .+|++.++     .+||||+++|+++.|.....+.++.+.+.......  +++++|+.
T Consensus        47 ~~v~PGlID~H~H~~~~~~~~~~~e~~~~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  124 (457)
T 1nfg_A           47 RYVFPGGIDVHTHVETVSFNTQSADTFATATVAAACGGTTTIVDFCQQDRGHSLAEAVAKWDGMAGGKSA--IDYGYHII  124 (457)
T ss_dssp             CEEEECEEEEEECCSCEETTEECSCCHHHHHHHHHHTTEEEEEEEEECCTTSCHHHHHHHHHHHHTTTCS--SEEEEEEE
T ss_pred             CEEccceEeeccccccCcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCChHHHHHHHHHHhcccCc--cCEEEEEe
Confidence            4899999999999983  443 56776543     39999999999887777777777776665544332  78888876


Q ss_pred             EEeCCCCCHH---HHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCC-------
Q 019093           74 LYLTDTTSPD---EIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPI-------  143 (346)
Q Consensus        74 ~~~~~~~~~~---el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~-------  143 (346)
                      .  .. .+.+   ++.++.+.| +.++|+|+.+..   .... +. ..+.++++.+++.|+++.+|+|+...+       
T Consensus       125 ~--~~-~~~~~~~~~~~~~~~G-~~~~k~~~~~~~---~~~~-~~-~~~~~~~~~a~~~~~~v~~H~e~~~~~~~~~~~~  195 (457)
T 1nfg_A          125 V--LD-PTDSVIEELEVLPDLG-ITSFKVFMAYRG---MNMI-DD-VTLLKTLDKAVKTGSLVMVHAENGDAADYLRDKF  195 (457)
T ss_dssp             C--SS-CCHHHHHHTTTGGGGT-CCEEEEESSSTT---TTBC-CH-HHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHH
T ss_pred             e--cC-CchhHHHHHHHHHHcC-CCEEEEeeccCC---CCCC-CH-HHHHHHHHHHHhcCCEEEEeCCCHHHHHHHHHHH
Confidence            4  22 2344   455566778 789999986421   1223 33 678899999999999999999975431       


Q ss_pred             --CC-----------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhh
Q 019093          144 --VD-----------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNAL  208 (346)
Q Consensus       144 --~~-----------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~  208 (346)
                        .+           ...+|.+++.+++  .+++..|+++|++|+++.++++.++++|  |.++++|++||++.++++++
T Consensus       196 ~~~g~~~~~~h~~~~~~~~~~~~~~~~~--~~a~~~g~~~~~~H~~~~~~~~~~~~~~~~G~~v~~~~~~h~~~~~~~~~  273 (457)
T 1nfg_A          196 VAEGKTAPIYHALSRPPRVEAEATARAL--ALAEIVNAPIYIVHVTCEESLEEVMRAKSRGVRALAETCTHYLYLTKEDL  273 (457)
T ss_dssp             HHTTCCSTHHHHHTSCHHHHHHHHHHHH--HHHHHHTCCEEECCCCSHHHHHHHHHHHHHTCCEEECEEGGGGTCCGGGG
T ss_pred             HhcCCcchhhccccCCHHHHHHHHHHHH--HHHHHHCCCEEEEeCCcHHHHHHHHHHHHcCCeEEEEEchHHhEeCHHHh
Confidence              11           1236777888888  7899999999999999999999999876  88899999999999999888


Q ss_pred             ccCC-CCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCcc-ccc---cCCC--CCCccchhHHHHHHHHHHH
Q 019093          209 FQGG-LRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERG-RKE---CACG--CAGIYNAPVALSLYAKVFE  281 (346)
Q Consensus       209 ~~~~-~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~-~K~---~~~~--~~G~~g~e~~lp~l~~~~~  281 (346)
                      .... .+..++++||+|...++++||+++.+|.+++ ++|||+|++.. +|.   .++.  ..|++|.|..++.++....
T Consensus       274 ~~~~~~~~~~~~~p~~r~~~~~~~~~~~~~~G~~~~-~gtD~~~~~~~~~k~~~~~~~~~~~~g~~g~e~~~~~~~~~~~  352 (457)
T 1nfg_A          274 ERPDFEGAKYVFTPPARAKKDHDVLWNALRNGVFET-VSSDHCSWLFKGHKDRGRNDFRAIPNGAPGVEERLMMVYQGVN  352 (457)
T ss_dssp             GCTTTGGGGGCCSSCCCCHHHHHHHHHHHHTTCCSC-EECCBCCCCTTTTTTTTTTCGGGSCCCBCCTTTHHHHHHHHHH
T ss_pred             ccccccCceeEEcCCCCCHHHHHHHHHHHhCCCeEE-EecCCCCCChHHhhhcccCCHhHCCCCcccHHHHHHHHHHHHH
Confidence            5411 2467899999999999999999999999999 99999999866 554   3332  3599999999998775443


Q ss_pred             h-cCCHHHHHHHHchhhhhhcCCC-CC-------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093          282 E-MGALDKLEAFTSFNGPDFYGLP-RN-------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI  346 (346)
Q Consensus       282 ~-~~~l~~lv~~~s~nPAki~gl~-~k-------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~  346 (346)
                      . ..++++++++++.||||+|||+ ++       +|||+|||  ..|.++.++++++..|||| +|+++.|+|.++
T Consensus       353 ~~~l~~~~~l~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~v~~v  427 (457)
T 1nfg_A          353 EGRISLTQFVELVATRPAKVFGMFPQKGTIAVGSDADIVLWDPEAEMVIEQTAMHNAMDYSSY-EGHKVKGVPKTV  427 (457)
T ss_dssp             TTSSCHHHHHHHHTHHHHHHTTCTTTSSSCSTTSBCCEEEEEEEEEEECCGGGSCSSCSCCTT-TTCEEEEEEEEE
T ss_pred             cCCCCHHHHHHHHhhhHHHHhCCCCCCcCcCCCCccCEEEEeCCCCEEecHHHccCCCCCCCc-cCCEecceEEEE
Confidence            3 3589999999999999999995 32       89999999  6688999999999999999 799999998764

>2vm8_A Dihydropyrimidinase-related protein 2; neurogenesis, phosphoprotein, differentiation, CRMP, cytoplasm, TIM barrel, polymorphism, axonal pathfinding; 1.9A {Homo sapiens} PDB: 2gse_A 1kcx_A

Probab=100.00  E-value=1.2e-42  Score=347.76  Aligned_cols=330  Identities=13%  Similarity=0.068  Sum_probs=256.7

Q ss_pred             eEEecCccccceecCC-C--cccccccccc-----CCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-G--DLLKAVVPHS-----VSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMT   73 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g--~~~ke~~~s~-----sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~   73 (346)
                      ++|+||+||+|+|++. .  ...+|++.++     .|||||+++|+++.|+....+.++...+...+...  ++++++..
T Consensus        74 ~~v~PGlID~H~H~~~~~~~~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~~  151 (501)
T 2vm8_A           74 RMVIPGGIDVHTRFQMPDQGMTSADDFFQGTKAALAGGTTMIIDHVVPEPGTSLLAAFDQWREWADSKSC--CDYSLHVD  151 (501)
T ss_dssp             CEEEECEEEEEECTTCEETTEECSSCHHHHHHHHHHTTEEEEEEEECCCTTSCHHHHHHHHHHHHHHHCS--SEEEEEEE
T ss_pred             CEEeeCEEEeeecccccccCCCcHHHHHHHHHHHHhCCcEEEEeCCCCCCCCChHHHHHHHHHHHhcCCe--eEEEEEEE
Confidence            4799999999999986 2  3446676543     39999999999887766666777776665544333  68887765


Q ss_pred             EEeCCC--CCHHHHHHHHH-cCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCC-------
Q 019093           74 LYLTDT--TSPDEIKLARK-TGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPI-------  143 (346)
Q Consensus        74 ~~~~~~--~~~~el~~l~~-~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~-------  143 (346)
                      .  ...  ...+++.++.+ .| +.++|+|+++..   .... +. +.+.++++.+++.|+++.+|+|+...+       
T Consensus       152 ~--~~~~~~~~~e~~~l~~~~G-~~~i~~~~~~~~---~~~~-~~-~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~  223 (501)
T 2vm8_A          152 I--SEWHKGIQEEMEALVKDHG-VNSFLVYMAFKD---RFQL-TD-CQIYEVLSVIRDIGAIAQVHAENGDIIAEEQQRI  223 (501)
T ss_dssp             C--CSCSHHHHHHHHHHHHHSC-CCEEEEESSSTT---TTBC-CH-HHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHH
T ss_pred             e--cCCCcccHHHHHHHHHhCC-ceEEEEeeccCC---CCCC-CH-HHHHHHHHHHHHhCCEEEEEccChHHHHHHHHHH
Confidence            3  211  12346777764 67 679999986421   1223 44 789999999999999999999974321       


Q ss_pred             --CC-----------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhh
Q 019093          144 --VD-----------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNAL  208 (346)
Q Consensus       144 --~~-----------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~  208 (346)
                        .+           ...+|..++.+.+  .+++.+|+|+|++|+++.+++++|+++|  |..|++++|||||+++.+++
T Consensus       224 ~~~G~~~~~~~~~~~~~~~~~~~i~~~~--~l~~~~g~~~hi~h~~~~~~~~~i~~~~~~G~~v~~~~~~~~l~~~~~~~  301 (501)
T 2vm8_A          224 LDLGITGPEGHVLSRPEEVEAEAVNRAI--TIANQTNCPLYITKVMSKSSAEVIAQARKKGTVVYGEPITASLGTDGSHY  301 (501)
T ss_dssp             HTTTCCSTHHHHHHSCHHHHHHHHHHHH--HHHHHHTCCEEEEEECCHHHHHHHHHHHHTTCCEEEEEBHHHHHCCGGGG
T ss_pred             HhcCCCChhhccccCCHHHHHHHHHHHH--HHHHHhCCcEEEEeCCcHHHHHHHHHHHhCCCcEEEEEChhHhhcChhhh
Confidence              11           1235556777877  7888889999999999999999998776  78899999999999998876


Q ss_pred             ccCC--CCCceEEeCCCCCh-hhHHHHHHHHHcCCccEEeecCCCCCCcccccc---CCC--CCCccchhHHHHHHHHHH
Q 019093          209 FQGG--LRPHNYCLPVLKRE-IHRQAVVSAVTSGSRKFFLGTDSAPHERGRKEC---ACG--CAGIYNAPVALSLYAKVF  280 (346)
Q Consensus       209 ~~~~--~~~~~k~~PPLR~~-~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~---~~~--~~G~~g~e~~lp~l~~~~  280 (346)
                      ....  .+..++++||+|.+ .++++||+++.+|.+++ ++|||+|++..+|..   ++.  +.|++|.|+.++.++..+
T Consensus       302 ~~~~~~~~~~~~~~pp~r~~~~~~~~l~~~l~~G~~~~-~gtD~~~~~~~~~~~~~~~~~~~~~G~~g~e~~l~~~~~~~  380 (501)
T 2vm8_A          302 WSKNWAKAAAFVTSPPLSPDPTTPDFLNSLLSCGDLQV-TGSAHCTFNTAQKAVGKDNFTLIPEGTNGTEERMSVIWDKA  380 (501)
T ss_dssp             GCSSHHHHHHTCCSSCCCSCTTHHHHHHHHHHHTSSCC-CBCCBCCCCHHHHGGGSSCGGGSCCCBCCTTTHHHHHHHHH
T ss_pred             cccccccCceEEECCCCCCCcchHHHHHHHHhcCceEE-EEecCCCCChhhhhcccCChhhCCCCCccHHHHHHHHHHHH
Confidence            4311  02357899999986 68999999999999999 999999998766532   332  359999999999988755


Q ss_pred             Hhc--CCHHHHHHHHchhhhhhcCCC-C-C------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEE
Q 019093          281 EEM--GALDKLEAFTSFNGPDFYGLP-R-N------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL  345 (346)
Q Consensus       281 ~~~--~~l~~lv~~~s~nPAki~gl~-~-k------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~  345 (346)
                      ++.  .++++++++++.|||++||+. + +      +|||+|||  ..|.++..++.|+.+|||| +|+.++|+|.+
T Consensus       381 ~~~~~l~~~~~l~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~~~~s~~~~~~~-~g~~~~~~v~~  456 (501)
T 2vm8_A          381 VVTGKMDENQFVAVTSTNAAKVFNLYPRKGRIAVGSDADLVIWDPDSVKTISAKTHNSSLEYNIF-EGMECRGSPLV  456 (501)
T ss_dssp             TTTTSSCHHHHHHHHTHHHHHHHTCTTTSSCCCTTSBCCEEEEEEEEEEECCTTTSSSSCSCCTT-TTCEEEEEEEE
T ss_pred             HHcCCCCHHHHHHHHhHhHHHHhCCCCCCCccCCCCcCCEEEEcCCCCeeeccccccccccCCCc-cCcEeCceEEE
Confidence            543  589999999999999999994 3 2      89999999  5799999999999999999 79999999865

>1xrt_A Dihydroorotase, dhoase; amidohydrolase, metalloenzyme, pyrimidine; 1.61A {Aquifex aeolicus} SCOP: b.92.1.3 c.1.9.6 PDB: 1xrf_A 3d6n_A*

Probab=100.00  E-value=2.9e-41  Score=335.14  Aligned_cols=325  Identities=20%  Similarity=0.245  Sum_probs=231.1

Q ss_pred             eEEecCccccceecCC-Ccccccccccc-----CCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPHS-----VSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLY   75 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~-----sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~   75 (346)
                      ++|+||+||+|+|++. +..+.+++...     .+||||+++|+++.|+....+.++...+..+....  +++.+++++.
T Consensus        96 ~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~g~~~  173 (467)
T 1xrt_A           96 LIVCPGFIDIHVHLRDPGQTYKEDIESGSRCAVAGGFTTIVCMPNTNPPIDNTTVVNYILQKSKSVGL--CRVLPTGTIT  173 (467)
T ss_dssp             SEEEECEEEEEECCCTTTCTTTCCHHHHHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCS--SEEEECBCSB
T ss_pred             CEEccCEEEEeecccCCCCCchhhHHHHHHHHHhCCeEEEEecCCCCCCCChHHHHHHHHHHhcccCc--ceEEEEeeec
Confidence            4799999999999987 66566666554     39999999999888777777777777766655433  6766554331


Q ss_pred             e-CCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC-----C----
Q 019093           76 L-TDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV-----D----  145 (346)
Q Consensus        76 ~-~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~-----~----  145 (346)
                      . ..+...+++.++.+.| +.+|+.        .+....+. +.+.++++.+++.|+++.+|+++.....     +    
T Consensus       174 ~~~~~~~~~~~~~l~~~g-~~~i~~--------~~~~~~~~-e~l~~~~~~A~~~g~~v~~H~~~~~~~~~~l~~g~~~~  243 (467)
T 1xrt_A          174 KGRKGKEIADFYSLKEAG-CVAFTD--------DGSPVMDS-SVMRKALELASQLGVPIMDHCEDDKLAYGVINEGEVSA  243 (467)
T ss_dssp             GGGCSSSBCCHHHHHHHT-CCCBCC--------TTSCCCCH-HHHHHHHHHHHHHTCEEEECCCGGGGTC----------
T ss_pred             CCCCcccHHHHHHHHHcC-CEEEEc--------CCCCCCCH-HHHHHHHHHHHhcCCEEEEECCCHHHHHHHHhcCccch
Confidence            1 0112345677777667 444431        11112244 7899999999999999999999754321     1    


Q ss_pred             ------h-hhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccCCCCCc
Q 019093          146 ------I-FDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQGGLRPH  216 (346)
Q Consensus       146 ------~-~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~~~~~~  216 (346)
                            + ...|..++.+.+  .+++..++++|++|+|+.+++++++++|  |..+++++|||||+++.+++..  ++.+
T Consensus       244 ~~g~~~~~~~~e~~~~~~~~--~~~~~~g~~~hi~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~~--~~~~  319 (467)
T 1xrt_A          244 LLGLSSRAPEAEEIQIARDG--ILAQRTGGHVHIQHVSTKLSLEIIEFFKEKGVKITCEVNPNHLLFTEREVLN--SGAN  319 (467)
T ss_dssp             ----------CHHHHHHHHH--HHHHHHCCEEEESCCCSHHHHHHHHHHHHTTCCEEEEECGGGGC--------------
T ss_pred             hcccccCChHHHHHHHHHHH--HHHHHhCCCEEEEeCCCHHHHHHHHHHHhcCCcEEEeccHHHHhcCHhHhhc--cCce
Confidence                  0 235666676766  5777789999999999999999999876  7889999999999999887643  3578


Q ss_pred             eEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCC--CCCccchhHHHHHHHHHHHhc--CCHHHHHHH
Q 019093          217 NYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACG--CAGIYNAPVALSLYAKVFEEM--GALDKLEAF  292 (346)
Q Consensus       217 ~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~--~~G~~g~e~~lp~l~~~~~~~--~~l~~lv~~  292 (346)
                      ++++||+|+++++++||+++..|.+++ ++|||+|++..+|+. |.  ..|++|+|+.++.++. +++.  .++++++++
T Consensus       320 ~~~~pplr~~~~~~~l~~~l~~Gv~~~-lgTD~~~~~~~~~~~-~~~~~~g~~g~e~~l~~~l~-~~~~g~ls~~~al~~  396 (467)
T 1xrt_A          320 ARVNPPLRKKEDRLALIEGVKRGIIDC-FATDHAPHQTFEKEL-VEFAMPGIIGLQTALPSALE-LYRKGIISLKKLIEM  396 (467)
T ss_dssp             ----------CCHHHHHHHHHHTCSCE-ECCCBCCCCC------------CCCCGGGHHHHHHH-HHHTTSSCHHHHHHH
T ss_pred             EEEcCCCCCHHHHHHHHHHHhCCceEE-EeeCCCCCChhHhcc-cccCCCCCccHHHHHHHHHH-HHHcCCCCHHHHHHH
Confidence            899999999999999999999999999 999999999887764 53  3599999999998876 4443  589999999


Q ss_pred             HchhhhhhcCCCC------CCccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093          293 TSFNGPDFYGLPR------NTSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI  346 (346)
Q Consensus       293 ~s~nPAki~gl~~------kdAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~  346 (346)
                      ++.||||+||++.      |+|||||+|  ..|.++.++++++++|+|| +|+++.|+|.++
T Consensus       397 aT~n~A~~lgl~~G~I~~G~~ADlvvld~~~~~~i~~~~~~~~~~~~p~-~g~~~~~~V~~v  457 (467)
T 1xrt_A          397 FTINPARIIGVDLGTLKLGSPADITIFDPNKEWILNEETNLSKSRNTPL-WGKVLKGKVIYT  457 (467)
T ss_dssp             HTHHHHHHHTCSCSCCCTTSBCCEEEEEEEEEEECSTTTCCSSCCCCTT-TTCEEEEEEEEE
T ss_pred             hccCHHHHhCCCcccccCCCCCCEEEEeCCCCEEEChHHccCcCCCCCc-cCCEEeEEEEEE
Confidence            9999999999853      289999999  5699999999999999999 799999998764

>3gip_A N-acyl-D-glutamate deacylase; amidohydrolase family, hydrolase; 1.50A {Bordetella bronchiseptica} PDB: 3giq_A*

Probab=100.00  E-value=3e-34  Score=286.20  Aligned_cols=287  Identities=11%  Similarity=0.008  Sum_probs=208.4

Q ss_pred             eEEecCccccceecCC-CccccccccccCCceeEEEe---------CCCCCCCCCcH---------HHHHHHHHHHHhhC
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSVSHYGRAIV---------MPNLKPPITTT---------AAAVAYRESILKAL   62 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~sGGvTtvv~---------mPnt~p~~~~~---------~~~~~~~~~~~~~~   62 (346)
                      ++|+||+||+|+|+.. .....+.-....||+||+++         |||+.|+.+..         +.+..+.+.+....
T Consensus        56 ~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~G~Tt~~~g~cG~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  135 (480)
T 3gip_A           56 KIVAPGFIDVHGHDDLMFVEKPDLRWKTSQGITTVVVGNCGVSAAPAPLPGNTAAALALLGETPLFADVPAYFAALDAQR  135 (480)
T ss_dssp             SEEEECEEESSCCCTTHHHHSTTCHHHHTTTEEEEEECCTTCCSCSCCCTTCCCGGGGGTCSSCCCSSHHHHHHHHHHSC
T ss_pred             CEEccCEEeccccccccccCChhHHHHhcCCeeEEEecCCCcCCCCCCcccchhhhhhhhccCccccCHHHHHHHHHhCC
Confidence            4899999999999764 11111111235699999999         88888766542         23556666655322


Q ss_pred             CCCccEEEEEEEE---------eCCCCCH---HHHHHHH----HcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHh
Q 019093           63 PASSNFTPLMTLY---------LTDTTSP---DEIKLAR----KTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEM  126 (346)
Q Consensus        63 ~~~vd~~~~~~~~---------~~~~~~~---~el~~l~----~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~  126 (346)
                       ..+||+++++..         .+.....   ++|.+++    ++| +.+||.|+.|..+   ..+ +. ..++++++++
T Consensus       136 -~~~~~~~~~g~~~~r~~~~g~~~~~~~~~~l~~m~~l~~~~~~~G-a~g~~~~~~y~p~---~~~-~~-~el~~~~~~a  208 (480)
T 3gip_A          136 -PMINVAALVGHANLRLAAMRDPQAAPTAAEQQAMQDMLQAALEAG-AVGFSTGLAYQPG---AVA-QA-AELEGLARVA  208 (480)
T ss_dssp             -CSSEEEEEEEHHHHHHHHCSSTTSCCCHHHHHHHHHHHHHHHHHT-CCEEEEETTSTTG---GGC-CH-HHHHHHHHHH
T ss_pred             -CCceEEEccccHHHHHHhcCCcCCCCCHHHHHHHHHHHHHHHHCC-CcEEeecCccCCc---ccC-CH-HHHHHHHHHH
Confidence             238999886531         0111123   3455555    578 7899999875321   122 44 7899999999


Q ss_pred             HHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccC---------CHHHHHHHHccC--CCeeEEE
Q 019093          127 VEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHIT---------TMDAVKFVESCK--EGFVAAT  195 (346)
Q Consensus       127 ~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvS---------t~~~l~~i~~ak--g~~vt~E  195 (346)
                      ++.|.++++|+|+...      .|.+++.+.+  .+++.+|+|+||+|+|         +++++++|+++|  |++|+||
T Consensus       209 ~~~g~~v~~H~~~~~~------~~~~a~~e~i--~la~~~g~~v~i~H~s~~~~~~~~~~~~~l~~i~~a~~~G~~Vt~e  280 (480)
T 3gip_A          209 AERRRLHTSHIRNEAD------GVEAAVEEVL--AIGRGTGCATVVSHHKCMMPQNWGRSRATLANIDRAREQGVEVALD  280 (480)
T ss_dssp             HHTTCEEEEECSCSST------THHHHHHHHH--HHHHHHCCEEEETTCCCCSGGGTTTHHHHHHHHHHHHHTTCCEEEE
T ss_pred             HHcCCEEEEEecCccc------cHHHHHHHHH--HHHHHhCCCEEEEEEeccCccchhhHHHHHHHHHHHHHcCCceEEE
Confidence            9999999999998743      5667788888  7899999999999999         599999999998  8999999


Q ss_pred             ccchhhccchhhhccCCCCCceEEe-------CCC--CC---------hhhHHHHHHHHHcCCccE--------------
Q 019093          196 VTPQHLVLNRNALFQGGLRPHNYCL-------PVL--KR---------EIHRQAVVSAVTSGSRKF--------------  243 (346)
Q Consensus       196 t~ph~L~l~~~~~~~~~~~~~~k~~-------PPL--R~---------~~d~~aL~~al~~G~Id~--------------  243 (346)
                      +||||+.++..++..  .+.++|++       ||+  |+         .++++++|+.+.+|.|+.              
T Consensus       281 ~~p~~~~~t~~~l~~--~~~~~~~~~~~~~~~p~~~g~~~~~ia~~~~~~~~~a~~~~l~~g~i~~~~~~~~~~~~~~~~  358 (480)
T 3gip_A          281 IYPYPGSSTILIPER--AETIDDIRITWSTPHPECSGEYLADIAARWGCDKTTAARRLAPAGAIYFAMDEDEVKRIFQHP  358 (480)
T ss_dssp             ECSCSCEEEECCGGG--TTTSSCCEEEEESSCGGGTTCBHHHHHHHHTSCHHHHHHHHCSEEEEECCCCHHHHHHHHHST
T ss_pred             eeccccCcchhhhcC--HHHHHHHhhccccCCCccCCCcHHHHHHHcCCCHHHHHHHhccCCeEEEeCCHHHHHHHHcCC
Confidence            999999999888765  35788999       999  44         667889997776655443              


Q ss_pred             --EeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHh---cCCHHHHHHHHchhhhhhcCCCC-C------CccEE
Q 019093          244 --FLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEE---MGALDKLEAFTSFNGPDFYGLPR-N------TSKIK  311 (346)
Q Consensus       244 --~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~---~~~l~~lv~~~s~nPAki~gl~~-k------dAdlv  311 (346)
                        +++||+.|+.         ..+.+.++..+|.++...++   ..+++++++++|.|||++||++. +      +|||+
T Consensus       359 ~~~~gsD~~~~~---------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~t~~~a~~~g~~~~G~l~~G~~AD~v  429 (480)
T 3gip_A          359 CCMVGSDGLPND---------ARPHPRLWGSFTRVLGRYVREARLMTLEQAVARMTALPARVFGFAERGVLQPGAWADVV  429 (480)
T ss_dssp             TEEECCCCCTTC---------SSCCTHHHHHHHHHHHCCCCCTCSSCHHHHHHHHTHHHHHHHTCTTCSSCSTTSBCCEE
T ss_pred             CeEEecCCcccC---------CCCChhhhhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHcCCCCCCccCCCCCCCEE
Confidence              0344443331         01345577788988864333   25899999999999999999953 2      89999


Q ss_pred             EEe
Q 019093          312 LTK  314 (346)
Q Consensus       312 i~d  314 (346)
                      |||
T Consensus       430 v~d  432 (480)
T 3gip_A          430 VFD  432 (480)
T ss_dssp             EEC
T ss_pred             EEc
Confidence            999

>1rk6_A D-aminoacylase; TIM barrel, beta barrel, insertion, hydrolase; 1.43A {Alcaligenes faecalis} SCOP: b.92.1.6 b.92.1.6 c.1.9.11 PDB: 1rjp_A 1v51_A 1rjq_A 1rjr_A 1rk5_A 1v4y_A 1m7j_A

Probab=99.95  E-value=1.4e-28  Score=245.99  Aligned_cols=287  Identities=11%  Similarity=0.051  Sum_probs=196.2

Q ss_pred             eEEecCccccceecCC-CccccccccccCCceeEEEeCCC---CCCCCC----------------cHHHHHHHHHHHHhh
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSVSHYGRAIVMPN---LKPPIT----------------TTAAAVAYRESILKA   61 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~sGGvTtvv~mPn---t~p~~~----------------~~~~~~~~~~~~~~~   61 (346)
                      ++|+||+||+|+|+.. +......-....+|+||+++||+   +.|..+                ..+++..+.++++..
T Consensus        70 ~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~G~Tt~~~~~~g~~~~p~~~~~l~~~i~~~~~~~~~~~~~~~~~~e~~~~~  149 (496)
T 1rk6_A           70 KVVSPGFIDSHTHDDNYLLKHRDMTPKISQGVTTVVTGNCGISLAPLAHANPPAPLDLLDEGGSFRFARFSDYLEALRAA  149 (496)
T ss_dssp             CEEEECEEESSCCCTTHHHHCTTCHHHHTTTEEEEEESCTTCCSCSEECSSCCTTGGGGCSSSCCEESSHHHHHHHHHHS
T ss_pred             CEEecCEeeeeecCCccccccHHHHHHHcCCeEEEEeCCCCCCCCCCChHHHHHhhcccCcccccCccCHHHHHHHHhcc
Confidence            4799999999999986 32222222334599999999985   344321                123445566666542


Q ss_pred             CCCCccEEEEEEEE---------eCCCCC---HHHHHHHH----HcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHH
Q 019093           62 LPASSNFTPLMTLY---------LTDTTS---PDEIKLAR----KTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEE  125 (346)
Q Consensus        62 ~~~~vd~~~~~~~~---------~~~~~~---~~el~~l~----~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~  125 (346)
                      . ..+++.++.+..         ......   .+++..++    +.| +.+||.+..+..+    ...+. +.+.+++++
T Consensus       150 ~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G-~~~~~~~~~~~~~----~~~~~-~el~~~~~~  222 (496)
T 1rk6_A          150 P-PAVNAACMVGHSTLRAAVMPDLRREATADEIQAMQALADDALASG-AIGISTGAFYPPA----AHAST-EEIIEVCRP  222 (496)
T ss_dssp             C-CSSEEEEEEEHHHHHHHHCSCCSSCCCHHHHHHHHHHHHHHHHHT-CCEEEEETTSGGG----TTCCH-HHHHHHHTH
T ss_pred             C-CccceEEecccccceeeeccccccCCCHHHHHHHHHHHHHHHHcC-CcEEeeccccCCC----CCCCH-HHHHHHHHH
Confidence            2 226665543210         011112   23444444    568 6788876533111    11244 788899999


Q ss_pred             hHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEcc---------CCHHHHHHHHccC--CCeeEE
Q 019093          126 MVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHI---------TTMDAVKFVESCK--EGFVAA  194 (346)
Q Consensus       126 ~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~Hv---------St~~~l~~i~~ak--g~~vt~  194 (346)
                      +++.|.++.+|+++...      +|.+++.+.+  .+++..|+++||.|+         ++++.+++++++|  | ++++
T Consensus       223 a~~~g~~v~~H~~~~~~------~~~~~l~~~~--~~a~~~g~~v~i~H~~~~~~~~~g~~~~~~~~l~~a~~~g-~v~~  293 (496)
T 1rk6_A          223 LITHGGVYATHMRDEGE------HIVQALEETF--RIGRELDVPVVISHHKVMGKLNFGRSKETLALIEAAMASQ-DVSL  293 (496)
T ss_dssp             HHHHTCEEEEECSCSST------THHHHHHHHH--HHHHHHTSCEEECSCCCCSGGGTTTHHHHHHHHHHHHHHS-CEEE
T ss_pred             HHHcCCEEEEEeCCCcc------cHHHHHHHHH--HHHHHcCCeEEEEEEeccCCcchhhHHHHHHHHHHHHHcC-CeEE
Confidence            99999999999997632      5666777777  688889999999999         6788899999987  8 9999


Q ss_pred             EccchhhccchhhhccCC-C-CCceEEeCCC--------------CChhhHHHHHHHHHcCCcc----------------
Q 019093          195 TVTPQHLVLNRNALFQGG-L-RPHNYCLPVL--------------KREIHRQAVVSAVTSGSRK----------------  242 (346)
Q Consensus       195 Et~ph~L~l~~~~~~~~~-~-~~~~k~~PPL--------------R~~~d~~aL~~al~~G~Id----------------  242 (346)
                      |++||++..+..+++... . +....++||.              |...++++||+++++|.||                
T Consensus       294 ~~~~~~~~~~~~~~~~l~~~~~~~v~~~p~~~~l~~~~l~~~~~~~g~~~~~~l~~~l~~G~i~~~~~~~~v~~~~~~~~  373 (496)
T 1rk6_A          294 DAYPYVAGSTMLKQDRVLLAGRTLITWCKPYPELSGRDLEEIAAERGKSKYDVVPELQPAGAIYFMMDEPDVQRILAFGP  373 (496)
T ss_dssp             EECSCSCEEEECCCCTTTTSSCEEEEEESSCGGGTTCBHHHHHHHTTSCHHHHHHHHCSEEEEECCCCHHHHHHHHHSTT
T ss_pred             EEeccCCCCCcccHHHhcCccceEEeccCCCcccccCcHHHHHHHcCCCHHHHHHHHHhcCceeecCCHHHHHHHHcCCC
Confidence            999998877655443211 0 1344455554              6778899999999999984                


Q ss_pred             -EEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHh---cCCHHHHHHHHchhhhhhcCCCC-C------CccEE
Q 019093          243 -FFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEE---MGALDKLEAFTSFNGPDFYGLPR-N------TSKIK  311 (346)
Q Consensus       243 -~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~---~~~l~~lv~~~s~nPAki~gl~~-k------dAdlv  311 (346)
                       + +||||+|+.  .+       ..+..+..+|.+++.+++   ..++++++++++.||||+|||+. +      +|||+
T Consensus       374 ~~-iGTD~~~~~--~~-------~~~~~~~~~~~~l~~~v~~~~~l~~~~~l~~~T~~~A~~lgl~~~G~i~~G~~ADlv  443 (496)
T 1rk6_A          374 TM-IGSDGLPHD--ER-------PHPRLWGTFPRVLGHYSRDLGLFPLETAVWKMTGLTAAKFGLAERGQVQPGYYADLV  443 (496)
T ss_dssp             EE-ECCCCCTTC--SS-------CCTHHHHHHHHHHCCCCCCTCSSCHHHHHHTTTHHHHHHHTCTTCSSCCTTSBCCEE
T ss_pred             EE-EecCCCCCC--CC-------CCchhhccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHhCCCCCCCcCCCCcccEE
Confidence             6 999999885  11       123345567777653332   25899999999999999999953 2      89999


Q ss_pred             EEe
Q 019093          312 LTK  314 (346)
Q Consensus       312 i~d  314 (346)
                      |||
T Consensus       444 ~~d  446 (496)
T 1rk6_A          444 VFD  446 (496)
T ss_dssp             EEC
T ss_pred             EEc
Confidence            999

>1e9y_B Urease subunit beta; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.92.1.1 c.1.9.2 PDB: 1e9z_B* 3qga_C* 3qgk_C*

Probab=99.92  E-value=7.3e-26  Score=229.79  Aligned_cols=274  Identities=11%  Similarity=0.048  Sum_probs=176.3

Q ss_pred             eEEecCccccceecCCCccccccccccCCceeEEEeC---CC--CCCCCCc--HHHHHHHHHHHHhhCCCCccEEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVM---PN--LKPPITT--TAAAVAYRESILKALPASSNFTPLMTL   74 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~g~~~ke~~~s~sGGvTtvv~m---Pn--t~p~~~~--~~~~~~~~~~~~~~~~~~vd~~~~~~~   74 (346)
                      ++|+||+||+|+|++....   ..+...+||||+++|   |+  +.+..++  +..++.+.+.... .  .+++.+++..
T Consensus       126 ~iV~PGlID~HvHl~~p~~---~~~al~~GvTTv~d~g~~p~~~t~~~~~~~g~~~l~~~~~a~~~-~--~~~~~~~g~g  199 (569)
T 1e9y_B          126 LIVTAGGIDTHIHFISPQQ---IPTAFASGVTTMIGGGTGPADGTNATTITPGRRNLKWMLRAAEE-Y--SMNLGFLAKG  199 (569)
T ss_dssp             CEEEECEEEEEEETTCTTH---HHHHHHTTEEEEEEECCSSCHHHHHCCCCCHHHHHHHHHHHHTT-S--SSEEEEEEEC
T ss_pred             CEEecCEEEEeecCCCcHH---HHHHHhCCeeEEEcCCcCCCCCCcCcccCCcHHHHHHHHHHhcc-c--CceEEEECCC
Confidence            4899999999999986221   123345999999999   42  2332322  4445555444332 2  2788876542


Q ss_pred             EeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHH
Q 019093           75 YLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFI  154 (346)
Q Consensus        75 ~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av  154 (346)
                        .. ...+++.++.+.| +.+||+|..+       +. +. +.+.++++.+++.|.++.+|+++... .+       .+
T Consensus       200 --~~-~~~~~l~e~~~~G-a~gik~~~~~-------~~-t~-e~l~~~l~~A~~~g~~V~iHa~~~~e-~g-------~~  258 (569)
T 1e9y_B          200 --NA-SNDASLADQIEAG-AIGFKIHEDW-------GT-TP-SAINHALDVADKYDVQVAIHTDTLNE-AG-------CV  258 (569)
T ss_dssp             --CC-SCHHHHHHHHHTT-CSEEEECGGG-------CC-CH-HHHHHHHHHHHHTTCEEEECCCTTCS-SC-------CH
T ss_pred             --Cc-CCHHHHHHHHHcC-CCEEEecCCC-------CC-CH-HHHHHHHHHHHHhCCEEEEEcCCccc-ch-------HH
Confidence              22 3577888888889 5899998642       12 33 78999999999999999999996321 01       01


Q ss_pred             HHHHHHHHHhCCCCcEEEEccCCHHH---HHHHHccCCCeeEEEccchhhccchhhhccCCCCC---ceEEeCCC-----
Q 019093          155 DTILQPLIQRLPQLKVVMEHITTMDA---VKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRP---HNYCLPVL-----  223 (346)
Q Consensus       155 ~~~l~~~la~~~g~~lhi~HvSt~~~---l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~---~~k~~PPL-----  223 (346)
                      ..    .++...|.++|++|+++.++   .+.|+.++...+.+.+++++|.++.+.+.. .++.   ...++|++     
T Consensus       259 ~~----~la~~~g~~~hi~H~~~~~~~~~~d~I~~~~~~gv~~~~~~ptl~~t~~~~~~-~~d~~~v~h~l~~~~~ed~~  333 (569)
T 1e9y_B          259 ED----TMAAIAGRTMHTFHTEGAGGGHAPDIIKVAGEHNILPASTNPTIPFTVNTEAE-HMDMLMVCHHKDKSIKEDVQ  333 (569)
T ss_dssp             HH----HHHHHTTCCEEETTTTSTTSCSTTTGGGGGGSTTEEEEECGGGCSCBTTHHHH-HHHHHHHTTTCCSSCHHHHH
T ss_pred             HH----HHHHHcCCCEEEEEcccCcccccHHHHHHHHHcCCeeEeeCCccccccchhhh-hhchhhhhhhcCcccHHHHH
Confidence            11    23444689999999998765   677777664455566677777666543311 0000   02244554     


Q ss_pred             ----CChhhHHHHHHHHHc-CCccEEeecCCCCCCcc-----------ccccCCCCCCccchhHHHHHHHHHHHhcCCHH
Q 019093          224 ----KREIHRQAVVSAVTS-GSRKFFLGTDSAPHERG-----------RKECACGCAGIYNAPVALSLYAKVFEEMGALD  287 (346)
Q Consensus       224 ----R~~~d~~aL~~al~~-G~Id~~i~SDHaP~~~~-----------~K~~~~~~~G~~g~e~~lp~l~~~~~~~~~l~  287 (346)
                          |.+.++.++|++|.+ |.+++ +||||+|++..           +|..  ...|..+++.       ......+++
T Consensus       334 ~~~~rlr~~~~a~~~~L~d~Gv~v~-iGSD~~~~~~~g~~~~~~~~~~~~~~--~~~G~l~~~~-------~~~~~ls~~  403 (569)
T 1e9y_B          334 FADSRIRPQTIAAEDTLHDMGAFSI-TSSDSQAMGRVGEVITRTWQTADKNK--KEFGRLKEEK-------GDNDNFRIK  403 (569)
T ss_dssp             HHHHHCCHHHHHHHHHHHHTTSCCE-ECCCTTSSCCTTSHHHHHHHHHHHHH--HHHCSCSSCC-------SSSCHHHHH
T ss_pred             HhhcchhhhHHHHHHHHHhCCCEEE-EeCCCCccCcccccccchhhHHHHhH--hhccCcchhh-------ccccCCCHH
Confidence                233578899999995 99999 99999998641           1100  0001111110       001123688


Q ss_pred             HHHHHHchhhhhhcCCCC--------CCccEEEEe-cce
Q 019093          288 KLEAFTSFNGPDFYGLPR--------NTSKIKLTK-IPW  317 (346)
Q Consensus       288 ~lv~~~s~nPAki~gl~~--------kdAdlvi~d-~~~  317 (346)
                      +++++++.|||+++|+..        |+|||+||| ..|
T Consensus       404 ~al~~~T~npA~~lGl~~~~GsIe~Gk~ADlvv~d~~~~  442 (569)
T 1e9y_B          404 RYLSKYTINPAIAHGISEYVGSVEVGKVADLVLWSPAFF  442 (569)
T ss_dssp             HHHGGGTHHHHHHTTCTTTSSSSCTTSBCCEEEECTTTT
T ss_pred             HHHHHHhHHHHHHcCCCCCccCcCCCCCCCEEEECchhc
Confidence            999999999999999942        289999999 554

>2ics_A Adenine deaminase; TIM barrel, binuclear zinc, adenine complex, amidohydrolase, structural genomics, PSI, protein structure initiative; HET: KCX ADE; 2.30A {Enterococcus faecalis} SCOP: b.92.1.8 c.1.9.14

Probab=99.90  E-value=1.6e-24  Score=207.60  Aligned_cols=280  Identities=13%  Similarity=0.009  Sum_probs=164.0

Q ss_pred             eEEecCccccceecCC-Ccccccccc--ccCCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEE---E
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVP--HSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTL---Y   75 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~--s~sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~---~   75 (346)
                      ++|+||+||+|+|+++ +...+++..  ...+||||+++|+++.+  .+.+.+.   +.++...   .++..+...   .
T Consensus        50 ~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~GvTtv~d~~~~~~--~~~~~~~---~~~~~~~---~~i~~~~~~~~~G  121 (379)
T 2ics_A           50 TYVSAGWIDDHVHCFEKMALYYDYPDEIGVKKGVTTVIDAGTTGA--ENIHEFY---DLAQQAK---TNVFGLVNISKWG  121 (379)
T ss_dssp             CEEEECEEEEEECCCTTSSSSCCCHHHHTGGGTEEEEEEESSSCT--TTHHHHH---HHHHTSS---SEEEEEEESSTTT
T ss_pred             EEEccCEEEeccccCccCccccCchhhhHhhCceeEEEcCCCCCc--cCHHHHH---HHHHhhc---ccEEEEccccccC
Confidence            5899999999999987 444444332  23599999999986543  3444333   2222211   122111111   0


Q ss_pred             eCC--CC------CHHHHHHHHH---cCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHH-cCCcEEEecCCCCCC
Q 019093           76 LTD--TT------SPDEIKLARK---TGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVE-QNMPLLVHGEVTDPI  143 (346)
Q Consensus        76 ~~~--~~------~~~el~~l~~---~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~-~g~~v~vHaE~~~~~  143 (346)
                      ..+  +.      ..+++.++.+   .| +.++|+++.+...   ..+ +. +.+.++++.+++ .|+++.+|+++... 
T Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~---~~~-~~-~~~~~~~~~a~~~~g~~v~~H~~~~~~-  194 (379)
T 2ics_A          122 IVAQDELADLSKVQASLVKKAIQELPDF-VVGIKARMSRTVI---GDN-GI-TPLELAKQIQQENQEIPLMVHIGSAPP-  194 (379)
T ss_dssp             TSSSCTTSSGGGCCHHHHHHHHHHCTTT-EEEEEEEESHHHH---TTC-TT-HHHHHHHHHHHTTTTCCEEEEECSSSS-
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhhhCc-ceEEEEecccccc---ccc-hH-HHHHHHHHHHHHhcCCeEEEeCCCCcc-
Confidence            111  11      1245666554   36 7899999742110   012 23 678889999999 99999999986431 


Q ss_pred             CChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCC
Q 019093          144 VDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVL  223 (346)
Q Consensus       144 ~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPL  223 (346)
                         ...|...+.+.-....-.+.+.+.|++|+|+.+..+.+++++...+++++||++..+                    
T Consensus       195 ---~~~~~~~~~~~g~~~~H~~~~~~~~~~~~s~~~~~~~~~~~~~~g~~~~~~p~~~~~--------------------  251 (379)
T 2ics_A          195 ---HLDEILALMEKGDVLTHCFNGKENGILDQATDKIKDFAWQAYNKGVVFDIGHGTDSF--------------------  251 (379)
T ss_dssp             ---CHHHHHHHCCTTCEEESTTCCSTTSSEETTTTEECHHHHHHHHTTCEEECCCTTTSC--------------------
T ss_pred             ---hHHHHHHHhhcCCeeeeccCCCccchhhccCHHHHHHHHHHHHcCCEEEecCCCCCc--------------------
Confidence               011111100000000111234455666666664444444433234678888863211                    


Q ss_pred             CChhhHHHHHHHHHcC-CccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHH-hcCCHHHHHHHHchhhhhhc
Q 019093          224 KREIHRQAVVSAVTSG-SRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFE-EMGALDKLEAFTSFNGPDFY  301 (346)
Q Consensus       224 R~~~d~~aL~~al~~G-~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~-~~~~l~~lv~~~s~nPAki~  301 (346)
                          ..+.++++++.| .+++ ++|||.|.   .+.     .| +  +..++.++..+. ...++++++++++.||||+|
T Consensus       252 ----~~~~~~~~~~~G~~~~~-l~TD~~~~---~~~-----~~-~--~~~~~~~l~~~~~~~ls~~~~~~~~T~n~A~~l  315 (379)
T 2ics_A          252 ----NFHVAETALREGMKAAS-ISTDIYIR---NRE-----NG-P--VYDLATTMEKLRVVGYDWPEIIEKVTKAPAENF  315 (379)
T ss_dssp             ----CHHHHHHHHHTTCCCSB-CCCCBCHH---HHH-----SS-S--CCCHHHHHHHHHHHTCCHHHHHHTTTHHHHHHT
T ss_pred             ----CHHHHHHHHHcCCCcce-EeccCccc---CCC-----CC-c--HhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh
Confidence                235688999999 9998 99998532   111     01 1  113343333222 34699999999999999999


Q ss_pred             CCC-CC------CccEEEEe-cceeecCCccccCCcccccCCCcEEEE----EEEE
Q 019093          302 GLP-RN------TSKIKLTK-IPWKVPEAFSFSFGDIIPMFAGNTLEW----QPSL  345 (346)
Q Consensus       302 gl~-~k------dAdlvi~d-~~~~v~~~~~~s~~~~sp~~~G~~l~G----~v~~  345 (346)
                      ||+ .+      +|||+||| ....+         .++|| +|+.++|    +|.+
T Consensus       316 gl~~~G~l~~G~~ADlvv~d~~~~~~---------~~~~~-~g~~~~~~~~~~v~~  361 (379)
T 2ics_A          316 HLTQKGTLEIGKDADLTIFTIQAEEK---------TLTDS-NGLTRVAKEQIRPIK  361 (379)
T ss_dssp             TCTTSSSCCTTSBCCEEEEEEEEEEE---------EEECT-TSCEEEEEEEEEEEE
T ss_pred             CCCCCcCCCCCCccCEEEEecccccc---------eeecC-CCCEEEeeeeeeeEE
Confidence            985 32      89999999 33322         37889 6999999    8875

>1onw_A Isoaspartyl dipeptidase; amidohydrolase, hydrolase, metalloprotease; HET: KCX; 1.65A {Escherichia coli} SCOP: b.92.1.7 c.1.9.13 PDB: 1onx_A* 1po9_A* 1poj_A* 1pok_B* 2aqo_A* 1ybq_A* 2aqv_A*

Probab=99.86  E-value=1.3e-20  Score=181.83  Aligned_cols=280  Identities=11%  Similarity=0.056  Sum_probs=157.0

Q ss_pred             eEEecCccccceecCC-Ccc---ccccccc-----cCCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-GDL---LKAVVPH-----SVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLM   72 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~---~ke~~~s-----~sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~   72 (346)
                      ++|+||+||+|+|+.. +..   ...+.+.     ..+|+||+++|+++.|...+.+.+....+.+.....  ..+...+
T Consensus        58 ~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~G~--~~~~~~g  135 (390)
T 1onw_A           58 QILCPGFIDQHVHLIGGGGEAGPTTRTPEVALSRLTEAGVTSVVGLLGTDSISRHPESLLAKTRALNEEGI--SAWMLTG  135 (390)
T ss_dssp             CEEEECEEEEEECTTCCBCTTSGGGBCCCCCHHHHHHTTEEEEEECCCSCCSSCCHHHHHHHHHHHHHHTS--EEEEEEE
T ss_pred             CEECcCeeEeeECccccCccccccccCHHHHHHHHHHCCeeEEecCCCcccccCcHHHHHHHHHHHHhcCC--ceEEecc
Confidence            4899999999999874 211   1112211     239999999999988877777665555554444321  1232221


Q ss_pred             EEEeCCCC----CH-HHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcC------CcEEEecCCCC
Q 019093           73 TLYLTDTT----SP-DEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQN------MPLLVHGEVTD  141 (346)
Q Consensus        73 ~~~~~~~~----~~-~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g------~~v~vHaE~~~  141 (346)
                      . +..+..    .. .++. +. .. ..++|+.++..    .....+. ..+.++++.++..+      .++.+|.....
T Consensus       136 ~-~~~~~~~~~~~~~~~~~-~~-~~-~~g~~~~~~~~----~~~~~~~-~~l~~~~~~a~~~~~~~~~~g~~~~h~~~~~  206 (390)
T 1onw_A          136 A-YHVPSRTITGSVEKDVA-II-DR-VIGVKCAISDH----RSAAPDV-YHLANMAAESRVGGLLGGKPGVTVFHMGDSK  206 (390)
T ss_dssp             C-SCSSCCCSSSCHHHHHH-HC-TT-EEEEEEEESST----TSCCCCH-HHHHHHHHHHHHHHHHHTSCCEEEEEECSCT
T ss_pred             c-cCCCchhhhhhhcchhh-hH-HH-hhcceeeecCC----CCCCCCH-HHHHHHHHHHhhhhhhhccCceEEEEeCCCH
Confidence            1 111110    11 1221 11 12 34557765421    1112243 66777776665433      24667863221


Q ss_pred             CCCChhhhHHHHHHHHHHHHHHhCCCCcEEE---EccCCHHHH--HHHHccC-CC--eeEEEccchhhccchhhhccCCC
Q 019093          142 PIVDIFDREKVFIDTILQPLIQRLPQLKVVM---EHITTMDAV--KFVESCK-EG--FVAATVTPQHLVLNRNALFQGGL  213 (346)
Q Consensus       142 ~~~~~~~~E~~av~~~l~~~la~~~g~~lhi---~HvSt~~~l--~~i~~ak-g~--~vt~Et~ph~L~l~~~~~~~~~~  213 (346)
                      .          .+..+.  .+++..+.++++   +|++...++  +.++.++ +.  .+++                   
T Consensus       207 ~----------~~~~~~--~~~~~g~~~v~~l~~~h~~~~~~~~~~~~~~~~~~~~~~~~~-------------------  255 (390)
T 1onw_A          207 K----------ALQPIY--DLLENCDVPISKLLPTHVNRNVPLFEQALEFARKGGTIDITS-------------------  255 (390)
T ss_dssp             T----------TTHHHH--HHHHTCCCCGGGEEEECGGGSHHHHHHHHHHHHTTCCEEEET-------------------
T ss_pred             H----------HHHHHH--HHHhccCCceEEeeccccccCHHHHHHHHHHHhcCCcccccc-------------------
Confidence            0          112233  344555665543   576543332  2333222 11  1111                   


Q ss_pred             CCceEEeCCCCChhhHHHHHHHHHcCC-cc--EEeecCCCCCCcc-ccccCCCCCCccchhHHHHHHHHHHHh-cCCHHH
Q 019093          214 RPHNYCLPVLKREIHRQAVVSAVTSGS-RK--FFLGTDSAPHERG-RKECACGCAGIYNAPVALSLYAKVFEE-MGALDK  288 (346)
Q Consensus       214 ~~~~k~~PPLR~~~d~~aL~~al~~G~-Id--~~i~SDHaP~~~~-~K~~~~~~~G~~g~e~~lp~l~~~~~~-~~~l~~  288 (346)
                          .++||   ..++++||++++.|. +|  + ++|||+|.... .+.......|++|++++++.++..... ..++++
T Consensus       256 ----~~~~~---~~~~~~l~~~~~~g~~~d~i~-l~TD~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  327 (390)
T 1onw_A          256 ----SIDEP---VAPAEGIARAVQAGIPLARVT-LSSDGNGSQPFFDDEGNLTHIGVAGFETLLETVQVLVKDYDFSISD  327 (390)
T ss_dssp             ----TCCSS---SCHHHHHHHHHHTTCCGGGEE-EECCBTCC-------------CCCCSHHHHHHHHHHHHHHCCCHHH
T ss_pred             ----ccCCC---CcCHHHHHHHHHcCCCccceE-EEccCCCCCcccCCccccccccCCCHHHHHHHHHHHHHHcCCCHHH
Confidence                12455   268899999999997 88  6 99999865321 121112234888999999998765433 459999


Q ss_pred             HHHHHchhhhhhcCCCC-C------CccEEEEecceeecCCccccCCccccc
Q 019093          289 LEAFTSFNGPDFYGLPR-N------TSKIKLTKIPWKVPEAFSFSFGDIIPM  333 (346)
Q Consensus       289 lv~~~s~nPAki~gl~~-k------dAdlvi~d~~~~v~~~~~~s~~~~sp~  333 (346)
                      +++++|.||||+|||++ +      +|||+|||.+|+|.  ...+++++..-
T Consensus       328 ~~~~~t~npA~~~gl~~~G~i~~G~~ADlvv~d~~~~v~--~v~~~G~~v~~  377 (390)
T 1onw_A          328 ALRPLTSSVAGFLNLTGKGEILPGNDADLLVMTPELRIE--QVYARGKLMVK  377 (390)
T ss_dssp             HHGGGTHHHHHHTTCTTCSSCCTTSBCCEEEECTTCCEE--EEEETTEEEEE
T ss_pred             HHHHHhHHHHHHhCCCCCcccCCCCcCCEEEEcCCCcEE--EEEECCEEEEE
Confidence            99999999999999963 2      89999999447764  23445555443

>2ogj_A Dihydroorotase; TIM barrel, binuclear zinc, imidazole complex, amido hydrola 9244B, structural genomics, PSI-2; HET: KCX; 2.62A {Agrobacterium tumefaciens}

Probab=99.84  E-value=2.3e-19  Score=174.71  Aligned_cols=270  Identities=13%  Similarity=0.101  Sum_probs=158.8

Q ss_pred             eEEecCccccceecCC-Cccccccccc--cCCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE---
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPH--SVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLY---   75 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s--~sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~---   75 (346)
                      ++|+||+||+|+|+.. +...+++...  ..+||||+++||++.+  .+.+.+   .+.+.+...  ..+..+....   
T Consensus        67 ~~v~PGlID~H~H~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~--~~~~~~---~~~~~~~~~--~~i~~~~~~~~~G  139 (417)
T 2ogj_A           67 AFISPGWVDLHVHIWHGGTDISIRPSECGAERGVTTLVDAGSAGE--ANFHGF---REYIIEPSR--ERIKAFLNLGSIG  139 (417)
T ss_dssp             CEEEECEEEEEECCCBTTBSSCCCGGGTSGGGTEEEEEEESSCCS--TTHHHH---HHHTTTTCS--SEEEEEEESSTTT
T ss_pred             CEEccCeeeccccccccccccCCCHHHHHHhCCcCeEEeCCcCCC--cCHHHH---HHHHhhccc--cCeEEEeccccCc
Confidence            4899999999999987 4444443332  3599999999997654  333322   221212111  1111111110   


Q ss_pred             eCC-----C------CCHHHHHHHHHc--CCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCC
Q 019093           76 LTD-----T------TSPDEIKLARKT--GVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDP  142 (346)
Q Consensus        76 ~~~-----~------~~~~el~~l~~~--G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~  142 (346)
                      ...     +      ...+++.++.+.  +.+.++|+|+.....   ..+ +. ..+.++++.+++.|+++.+|+++...
T Consensus       140 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ik~~~~~~~~---~~~-~~-~~l~~~~~~a~~~g~~v~~H~~~~~~  214 (417)
T 2ogj_A          140 LVACNRVPELRDIKDIDLDRILECYAENSEHIVGLKVRASHVIT---GSW-GV-TPVKLGKKIAKILKVPMMVHVGEPPA  214 (417)
T ss_dssp             TTTTTTSCSCSSGGGCCHHHHHHHHHTCTTTEEEEEEEESHHHH---TTC-TT-HHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred             CCCCCCcccccchhhcCHHHHHHHHHhCCCceEEEEEEecCCcc---ccc-cH-HHHHHHHHHHHHcCCcEEEEcCCCcc
Confidence            011     1      012455555543  236789999752110   112 23 67888999999999999999986431


Q ss_pred             CCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccC----------CHHHHHHHHccCCCeeEEEccchhhccchhhhccCC
Q 019093          143 IVDIFDREKVFIDTILQPLIQRLPQLKVVMEHIT----------TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGG  212 (346)
Q Consensus       143 ~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvS----------t~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~  212 (346)
                                ....++. .+.  .|  ..+.|..          +....+.+++++...+.+++||+..           
T Consensus       215 ----------~~~~~~~-~l~--~g--~~~~H~~~~~~~~~~~~~~~~~~~i~~~~~~g~~v~~~~~~~-----------  268 (417)
T 2ogj_A          215 ----------LYDEVLE-ILG--PG--DVVTHCFNGKSGSSIMEDEDLFNLAERCAGEGIRLDIGHGGA-----------  268 (417)
T ss_dssp             ----------CHHHHHH-HCC--TT--CEEETTTCCCTTTCTTSCHHHHHHHHHC--CCCEEECCBCSS-----------
T ss_pred             ----------cHHHHHH-Hhc--CC--CEEEeccCCCccchhccCHHHHHHHHHHHhcCcEEEecCCCc-----------
Confidence                      0111110 111  12  4566643          3445566666652335566666411           


Q ss_pred             CCCceEEeCCCCChhhHHHHHHHHHcC-CccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHh-cCCHHHHH
Q 019093          213 LRPHNYCLPVLKREIHRQAVVSAVTSG-SRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEE-MGALDKLE  290 (346)
Q Consensus       213 ~~~~~k~~PPLR~~~d~~aL~~al~~G-~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~-~~~l~~lv  290 (346)
                         .+          .+..+|++++.| ..++ ++|||. ++.  +      .| +  ...++.++..+.+ ..++++++
T Consensus       269 ---~~----------~~~~~~~~~~~G~~~~~-lgtD~~-~~~--~------~g-~--~~~l~~~~~~~~~~~l~~~~al  322 (417)
T 2ogj_A          269 ---SF----------SFKVAEAAIARGLLPFS-ISTDLH-GHS--M------NF-P--VWDLATTMSKLLSVDMPFENVV  322 (417)
T ss_dssp             ---SC----------CHHHHHHHHHTTCCCSB-CCBCBS-TTT--T------TT-T--CCCHHHHHHHHHHTTCCHHHHH
T ss_pred             ---cc----------cchHHHHHHHcCCCceE-EEcCCC-CCc--c------CC-C--hhHHHHHHHHHHHcCCCHHHHH
Confidence               11          356799999999 9999 999997 531  1      11 0  1134444433333 45899999


Q ss_pred             HHHchhhhhhcCCC-CC------CccEEEEe-cceeecCCccccCCcccccCCCcEEEE----EEEE
Q 019093          291 AFTSFNGPDFYGLP-RN------TSKIKLTK-IPWKVPEAFSFSFGDIIPMFAGNTLEW----QPSL  345 (346)
Q Consensus       291 ~~~s~nPAki~gl~-~k------dAdlvi~d-~~~~v~~~~~~s~~~~sp~~~G~~l~G----~v~~  345 (346)
                      ++++.||||+|||+ .+      +|||+||| .....         .+++| .|+.+.|    +|.+
T Consensus       323 ~~~T~n~A~~lgl~~~G~l~~G~~ADlvv~d~~~~~~---------~~~~~-~g~~~~~~~~~~v~~  379 (417)
T 2ogj_A          323 EAVTRNPASVIRLDMENRLDVGQRADFTVFDLVDADL---------EATDS-NGDVSRLKRLFEPRY  379 (417)
T ss_dssp             HTTTHHHHHHTTCCCSSTTSTTSBCEEEEEEEEEEEE---------EEECT-TSCEEEEEEEEEEEE
T ss_pred             HHHHHHHHHHhCCCCCCccCCCCcccEEEEecccCCc---------eecCC-CCceEecccccceEE
Confidence            99999999999995 32      89999999 32221         35678 5888887    6654

>2vhl_A N-acetylglucosamine-6-phosphate deacetylase; N- acetyleglucosamine-6-phosphate, carbohydrate metabolism, hydrolase; HET: GLP PGE; 2.05A {Bacillus subtilis}

Probab=99.80  E-value=6.6e-21  Score=184.28  Aligned_cols=272  Identities=10%  Similarity=0.036  Sum_probs=155.8

Q ss_pred             eEEecCccccceecCCC----cccccccccc-----CCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhC---CCCccEE
Q 019093            2 ELTLTQPDDWHLHLRDG----DLLKAVVPHS-----VSHYGRAIVMPNLKPPITTTAAAVAYRESILKAL---PASSNFT   69 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~g----~~~ke~~~s~-----sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~---~~~vd~~   69 (346)
                      ++|+||+||+|||++.+    ...+|++.++     .+||||+++||++.|+....+.++.+.+...+..   .....++
T Consensus        53 ~~v~PGlID~H~H~~~~~~~~~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~g~~~~~  132 (396)
T 2vhl_A           53 SVLLPGMIDIHIHGGYGADTMDASFSTLDIMSSRLPEEGTTSFLATTITQEHGNISQALVNAREWKAAEESSLLGAELLG  132 (396)
T ss_dssp             CEEEECEEEEEECEETTEEGGGCSHHHHHHHHHHGGGGTEEEEEEECCSCCHHHHHHHHHHHHHHHHHCSGGGSSSEEEE
T ss_pred             CEEcCCEEEEeecCCcCccccCCCHHHHHHHHHHHHcCCeeEEEecccCCCHHHHHHHHHHHHHHHhcccccccccceEE
Confidence            48999999999999863    3345665443     4999999999987765333334455554443211   0012455


Q ss_pred             EEEEE-EeCC---C---------CCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEE-
Q 019093           70 PLMTL-YLTD---T---------TSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLV-  135 (346)
Q Consensus        70 ~~~~~-~~~~---~---------~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~v-  135 (346)
                      +|... +..+   +         ...+.+.++.+.+ .-.+|++...   ..   . .  . +.++.+.+++.|+++.+ 
T Consensus       133 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~ik~~~~~---p~---~-~--~-~~~~~~~a~~~g~~v~~g  201 (396)
T 2vhl_A          133 IHLEGPFVSPKRAGAQPKEWIRPSDVELFKKWQQEA-GGLIKIVTLA---PE---E-D--Q-HFELIRHLKDESIIASMG  201 (396)
T ss_dssp             EEEECSSSCGGGCTTSCGGGCCCCCHHHHHHHHHHT-TTCEEEEEEC---GG---G-S--G-GGHHHHHHHHTTCEEEEC
T ss_pred             EeeecCccCccccCCCCHHHccCCCHHHHHHHHHhc-CCcceEEEEC---CC---C-C--C-HHHHHHHHHHCCCEEeec
Confidence            54331 0011   0         0234566665543 1234654311   00   0 1  1 22566778888998888 


Q ss_pred             ecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--C--------CeeEEEccchhhccch
Q 019093          136 HGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--E--------GFVAATVTPQHLVLNR  205 (346)
Q Consensus       136 HaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g--------~~vt~Et~ph~L~l~~  205 (346)
                      |+....              ..+  ..+...|++ ||+|+++..+.  +. ++  |        .++++|+++|++.++.
T Consensus       202 H~~~~~--------------~~~--~~a~~~G~~-~i~H~~~~~~~--~~-~~~~G~~~~~~~~~~~~~e~~~h~~~l~~  261 (396)
T 2vhl_A          202 HTDADS--------------ALL--SDAAKAGAS-HMTHLYNAMSP--FH-HREPGVIGTALAHDGFVTELIADGIHSHP  261 (396)
T ss_dssp             SBCCCH--------------HHH--HHHHHTTCC-EESSTTSSBCC--CC-SSSCHHHHHHHHCTTCEEEEECSSSSSCH
T ss_pred             ccCCCH--------------HHH--HHHHHcCCC-EeEeCCccCcc--cc-cCCCCchhhhhcCCCcEEEEcCCccccCH
Confidence            886321              111  123346887 99999875432  11 12  2        2579999999999998


Q ss_pred             hhhccCCCCCceEEeCCCCChhhHHHHH-HHHHcCCccEEeecCCCCCCccccccCC--CCCCccchhHHHHHHHHHHHh
Q 019093          206 NALFQGGLRPHNYCLPVLKREIHRQAVV-SAVTSGSRKFFLGTDSAPHERGRKECAC--GCAGIYNAPVALSLYAKVFEE  282 (346)
Q Consensus       206 ~~~~~~~~~~~~k~~PPLR~~~d~~aL~-~al~~G~Id~~i~SDHaP~~~~~K~~~~--~~~G~~g~e~~lp~l~~~~~~  282 (346)
                      +.+..     .++.+||.|.....+.+| .++.+|.+++      +|+....|...+  ...|.+|.+..++..+..+++
T Consensus       262 ~~~~~-----~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~~~~~g~~~~~d~~~~g~~~~l~~~l~~~~~  330 (396)
T 2vhl_A          262 LAAKL-----AFLAKGSSKLILITDSMRAKGLKDGVYEF------GGQSVTVRGRTALLSDGTLAGSILKMNEGARHMRE  330 (396)
T ss_dssp             HHHHH-----HHHHHCTTSEEEECCBCTTTTSCSEEEEE------TTEEEEEETTEEECTTSCBCSBCCCHHHHHHHHHH
T ss_pred             HHHHH-----HHhhcCCccEEEECcChhhcCCCCceEEE------CCeEEEEECCEEEeCCCcccccccCHHHHHHHHHH
Confidence            87641     223333333222222234 3444444432      244433332211  123677777777776654444


Q ss_pred             --cCCHHHHHHHHchhhhhhcCCC-C-C------CccEEEEec
Q 019093          283 --MGALDKLEAFTSFNGPDFYGLP-R-N------TSKIKLTKI  315 (346)
Q Consensus       283 --~~~l~~lv~~~s~nPAki~gl~-~-k------dAdlvi~d~  315 (346)
                        ..++++++++++.||||+||++ + +      +|||+|||.
T Consensus       331 ~~~~~~~~~l~~aT~~~A~~lgl~~~~G~i~~G~~ADlvv~d~  373 (396)
T 2vhl_A          331 FTNCSWTDIANITSENAAKQLGIFDRKGSVTVGKDADLVIVSS  373 (396)
T ss_dssp             HHCCCHHHHHHHHTHHHHHHHTCTTTSSSCCTTSBCCEEEECT
T ss_pred             hcCCCHHHHHHHHHHHHHHHhCCcCCCceeCCCCcCCEEEECC
Confidence              4599999999999999999995 2 2      899999993

>2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri}

Probab=99.79  E-value=4.9e-18  Score=163.14  Aligned_cols=257  Identities=14%  Similarity=0.095  Sum_probs=146.8

Q ss_pred             eEEecCccccceecCC-Cccc-ccc----ccccCCceeEEEeCCCC---CCCCCcHHHHH--HHHHHHHhhCCCCccEEE
Q 019093            2 ELTLTQPDDWHLHLRD-GDLL-KAV----VPHSVSHYGRAIVMPNL---KPPITTTAAAV--AYRESILKALPASSNFTP   70 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~-ke~----~~s~sGGvTtvv~mPnt---~p~~~~~~~~~--~~~~~~~~~~~~~vd~~~   70 (346)
                      ++|+||+||+|+|++. +... .+.    .....+||||+++|+|.   ..+ .+.+.++  ...+...........+.+
T Consensus        57 ~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  135 (386)
T 2vun_A           57 STVTPGLLDTHVHVSGGDYAPRQKTMDFISSALHGGVTTMISAGSPHFPGRP-KDAAGTKALAITLSKSYYNARPAGVKV  135 (386)
T ss_dssp             CEEEECEEEEEECCCSTTEEGGGTEESHHHHHHTTTEEEEEECCCTTSTTCC-CSHHHHHHHHHHHHHHHHHCCGGGCEE
T ss_pred             CEEccceeeccccccCCCcChhHHHHHHHHHHHhCCceEEEeccccccCCCh-hhHHHHHHHHHHhhcccccccccceee
Confidence            4899999999999985 3221 111    11134999999999862   122 2333333  111111110000001111


Q ss_pred             EEEE-EeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhh
Q 019093           71 LMTL-YLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDR  149 (346)
Q Consensus        71 ~~~~-~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~  149 (346)
                      +.+. ....+...+++.++.+.| ..++|+++..       ++.+. +.+.++++.+++.|+++.+|+++......  ..
T Consensus       136 ~~g~~~~~~~~~~~~~~~~~~~g-~~~ik~~~~~-------~~~~~-~~l~~~~~~a~~~g~~v~~H~~~~~~~~~--~~  204 (386)
T 2vun_A          136 HGGAVILEKGLTEEDFIEMKKEG-VWIVGEVGLG-------TIKNP-EDAAPMVEWAHKHGFKVQMHTGGTSIPGS--ST  204 (386)
T ss_dssp             ECCEECCCTTCCHHHHHHHHHTT-CCEEEEETSS-------SCCSH-HHHHHHHHHHHHTTCEEEEECSCCSCSTT--CS
T ss_pred             ccCcccccCCcCHHHHHHHHHhC-CCeEEEeecC-------CCCCH-HHHHHHHHHHHHCCCeEEEecCCcccccc--CH
Confidence            1110 012223456788888888 6789998521       12244 78999999999999999999985432100  00


Q ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEccCC------HHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCC
Q 019093          150 EKVFIDTILQPLIQRLPQLKVVMEHITT------MDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVL  223 (346)
Q Consensus       150 E~~av~~~l~~~la~~~g~~lhi~HvSt------~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPL  223 (346)
                      |  .+...+      ..|.+ .|.|.++      .+.++.+++. |..+  -.+++           .+           
T Consensus       205 ~--~i~~~~------~~G~~-~i~H~~~~~~~~~~~~~~~~~~~-g~~v--l~~~~-----------~g-----------  250 (386)
T 2vun_A          205 V--TADDVI------KTKPD-VVSHINGGPTAISVQEVDRIMDE-TDFA--MEIVQ-----------CG-----------  250 (386)
T ss_dssp             C--CHHHHH------HHCCS-EEETTTCSSSCCCHHHHHHHHHH-CCCE--EEEES-----------SS-----------
T ss_pred             H--HHHHHH------HcCCC-EEEEccCCCCCCCHHHHHHHHHc-CCeE--EEecc-----------CC-----------
Confidence            0  121112      23666 5999765      4555544432 4444  11121           01           


Q ss_pred             CChhhHHHHHHHHHcCCcc--EEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHchhhhhhc
Q 019093          224 KREIHRQAVVSAVTSGSRK--FFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFY  301 (346)
Q Consensus       224 R~~~d~~aL~~al~~G~Id--~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~~~~l~~lv~~~s~nPAki~  301 (346)
                      ....++..+|++++.|.+|  + ++||| |+..     +....|....|..  .   ......++++++++++.||||+|
T Consensus       251 ~~~~~~~~~~~~~~~g~~d~v~-lgTD~-p~~~-----~~~~~g~~~~~~~--~---~~~~~ls~~~~~~~~T~n~A~~l  318 (386)
T 2vun_A          251 NPKIADYVARRAAEKGQLGRVI-FGNDA-PSGT-----GLIPLGILRNMCQ--I---ASMSDIDPEVAVCMATGNSTAVY  318 (386)
T ss_dssp             CHHHHHHHHHHHHHHTCGGGEE-EECCB-SBTT-----BBCTTHHHHHHHH--H---HHHSCCCHHHHHHHHTHHHHHHH
T ss_pred             cccccHHHHHHHHHcCCCceeE-EecCC-CCCC-----CCCcchhHHHHHH--H---HhhcCCCHHHHHHHHhHHHHHHc
Confidence            0346778899999999955  8 89999 5311     1112243333322  1   11234589999999999999999


Q ss_pred             CCCC------CCccEEEEe-cc
Q 019093          302 GLPR------NTSKIKLTK-IP  316 (346)
Q Consensus       302 gl~~------kdAdlvi~d-~~  316 (346)
                      |+..      ++|||+|+| ..
T Consensus       319 gl~~G~i~~G~~ADlvv~d~~~  340 (386)
T 2vun_A          319 GLNTGVIAPGKEADLIIMDTPL  340 (386)
T ss_dssp             TCSCSSCSTTSBCCEEEEECBT
T ss_pred             CCCceeeCCCCeeCEEEECCCc
Confidence            9821      289999999 44

>4ac7_C Urease subunit alpha; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 4ubp_C* 1ie7_C*

Probab=99.78  E-value=7.5e-19  Score=177.05  Aligned_cols=265  Identities=13%  Similarity=0.062  Sum_probs=159.0

Q ss_pred             eEEecCccccceecCC-CccccccccccCCceeEEE-------eCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSVSHYGRAI-------VMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMT   73 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~sGGvTtvv-------~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~   73 (346)
                      ++|+||+||+|||+++ +..    -....||+||++       +|||+.|..+....++.+.+.++. ..  +||++++.
T Consensus       127 ~~v~PG~ID~HvH~~~Pg~~----~aAl~gGvTTvv~gg~~p~~~~n~~p~~~~~~~l~~~l~aa~~-~~--v~~~~~g~  199 (570)
T 4ac7_C          127 KIVTAGGIDTHVHFINPDQV----DVALANGITTLFGGGTGPAEGSKATTVTPGPWNIEKMLKSTEG-LP--INVGILGK  199 (570)
T ss_dssp             CEEEECEEEEEEECCCTTHH----HHHHHTTEEEEEEECSSSCHHHHHSSCCCHHHHHHHHHHHHTT-CS--SEEEEEEE
T ss_pred             CEEeeCEEecccccCCcchH----HHHHhcCCeEEEecCcCcccccCCcCcCCcHHHHHHHHHHhhh-CC--eeEEEEec
Confidence            4899999999999998 532    234459999999       688888888887777766665433 33  89999886


Q ss_pred             EEeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHH
Q 019093           74 LYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVF  153 (346)
Q Consensus        74 ~~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~a  153 (346)
                      .  +.+ +.+++.++.++| +.+||+|+.+       +. +. ..++++|++++++|.++++|||+... .+       .
T Consensus       200 ~--~~~-~l~el~el~~aG-a~gfK~~~~~-------~~-~~-~~L~~aL~~A~~~g~~V~iHae~l~e-~g-------~  258 (570)
T 4ac7_C          200 G--HGS-SIAPIMEQIDAG-AAGLKIHEDW-------GA-TP-ASIDRSLTVADEADVQVAIHSDTLNE-AG-------F  258 (570)
T ss_dssp             C--CCS-SHHHHHHHHHHT-CCEEEEEGGG-------CC-CH-HHHHHHHHHHHHHTCEEEEECCTTCS-SC-------C
T ss_pred             c--CCc-CHHHHHHHHHcC-CCeEeeccCC-------CC-CH-HHHHHHHHHHHHcCCEEEEEcCCcch-hh-------H
Confidence            4  443 688999999999 7899999743       12 44 78999999999999999999995432 11       1


Q ss_pred             HHHHHHHHHHhCCCCcEEEEccCCHHH---HHHHHccCCCeeEEEcc-c---hhhccchhhhccCCCCCceEEeCCC---
Q 019093          154 IDTILQPLIQRLPQLKVVMEHITTMDA---VKFVESCKEGFVAATVT-P---QHLVLNRNALFQGGLRPHNYCLPVL---  223 (346)
Q Consensus       154 v~~~l~~~la~~~g~~lhi~HvSt~~~---l~~i~~akg~~vt~Et~-p---h~L~l~~~~~~~~~~~~~~k~~PPL---  223 (346)
                      +...    ++...|.++|..|+.....   =+.++.+...+|..-.+ |   |-.-.-++.+.-.  -.....+|-+   
T Consensus       259 Veda----lea~~Gr~ih~~HiEgag~~hapd~i~~~~~~~vlps~t~Pt~p~~~n~~~e~ld~l--~v~hhl~~~i~~D  332 (570)
T 4ac7_C          259 LEDT----LRAINGRVIHSFHVEGAGGGHAPDIMAMAGHPNVLPSSTNPTRPFTVNTIDEHLDML--MVCHHLKQNIPED  332 (570)
T ss_dssp             HHHH----HHHHTTCCEEETTTTSTTSSSTTTGGGGGGSTTEEEBCCGGGSSCBTTHHHHHHHHH--HHHTTCCTTCHHH
T ss_pred             HHHH----HHHhCCCcceeEeeeccccccChHHHHHhccCCccccccCCCCCcccchhHHhhhhe--eeecccCccccch
Confidence            1122    2223477889888864322   24454443234443321 2   1100000110000  0000011110   


Q ss_pred             ------CChhhHHHHHH-HHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHH-----HHH----------
Q 019093          224 ------KREIHRQAVVS-AVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAK-----VFE----------  281 (346)
Q Consensus       224 ------R~~~d~~aL~~-al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~-----~~~----------  281 (346)
                            |-+.++.+=|+ .+..|.+-+ ++||......         .|    |...+.+..     ...          
T Consensus       333 ~~~a~~Rir~~~i~a~~~L~d~G~~v~-~gSD~p~~~~---------~g----e~~~~~~~~a~~~~~~rg~l~~~~~~~  398 (570)
T 4ac7_C          333 VAFADSRIRPETIAAEDILHDLGIISM-MSTDALAMGR---------AG----EMVLRTWQTADKMKKQRGPLAEEKNGS  398 (570)
T ss_dssp             HHHHHHHSCHHHHHHHHHHHHTTSSCB-CCCCBTTSSC---------TT----CHHHHHHHHHHHHHHHHCSCTTCCTTC
T ss_pred             hHHHHhhhhhhhcccccchhhcCCEEE-EECcccccCC---------cC----cccCcHHHHHHHHHHhcCCCCCccccc
Confidence                  00122233333 355688888 8999632210         01    111111111     000          


Q ss_pred             hcCCHHHHHHHHchhhhhhcCCCC--------CCccEEEEe
Q 019093          282 EMGALDKLEAFTSFNGPDFYGLPR--------NTSKIKLTK  314 (346)
Q Consensus       282 ~~~~l~~lv~~~s~nPAki~gl~~--------kdAdlvi~d  314 (346)
                      ++.++++.++..+.|||+.+|+..        |.|||++||
T Consensus       399 ~~~~~~eal~~~T~~~A~~lg~~~~~Gsi~~Gk~ADlvvld  439 (570)
T 4ac7_C          399 DNFRLKRYVSKYTINPAIAQGIAHEVGSIEEGKFADLVLWE  439 (570)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHTCTTTSSSCCTTSBCCEEEEC
T ss_pred             cCCCHHHHHHHHhHHHHHHhCCCCCCcccCCCCccCEEEEC
Confidence            112478999999999999999842        289999998

>4gy7_A Urease; JACK bean, hydrolase, ME binding, nickel; HET: CME KCX; 1.49A {Canavalia ensiformis} PDB: 3la4_A* 4h9m_A*

Probab=99.77  E-value=1.1e-20  Score=198.47  Aligned_cols=279  Identities=13%  Similarity=0.081  Sum_probs=164.1

Q ss_pred             eEEecCccccceecCCCccccccccccCCceeEEEeCCCCCC--------CCCcHHHHHHHHHHHHhhCCCCccEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKP--------PITTTAAAVAYRESILKALPASSNFTPLMT   73 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~g~~~ke~~~s~sGGvTtvv~mPnt~p--------~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~   73 (346)
                      ++|+||+||+|+|++.+....+.   ..+|+||++++. +.|        ...........   ........+++++++.
T Consensus       397 kiVtPGfID~HvHl~~P~~~~eA---LasGVTTvv~gG-tgp~~~~~~~~~~~~~~~~~~~---l~a~~~~~vn~g~~~~  469 (840)
T 4gy7_A          397 LIVTAGAIDCHVHYICPQLVYEA---ISSGITTLVGGG-TGPAAGTRATTCTPSPTQMRLM---LQSTDDLPLNFGFTGK  469 (840)
T ss_dssp             CEEEECEEEEEEECCCTHHHHHH---HHHTEEEEEEEC-SSSCHHHHHSSCCCSHHHHHHH---HHHTTTSSSEEEEEEE
T ss_pred             CEEccCeeeeccCCCCCCchHHH---HHhhHHHHHhCC-CceecCcccccccchHHHHHHH---HhhhhcceeEEEEeCC
Confidence            58999999999999873322233   346899988863 221        12222222222   1121211267776554


Q ss_pred             EEeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHH
Q 019093           74 LYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVF  153 (346)
Q Consensus        74 ~~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~a  153 (346)
                         ......+++.++.+.| +.++|+|+.+.       . +. ..+.++++.+++.|..+++|+++.+....        
T Consensus       470 ---~~~~~~~~L~el~~aG-a~g~K~~~~~~-------~-t~-~~i~~aL~~A~e~g~~V~ih~e~~~~~~~--------  528 (840)
T 4gy7_A          470 ---GSSSKPDELHEIIKAG-AMGLKLHEDWG-------S-TP-AAIDNCLTIAEHHDIQINIHTDTLNEAGF--------  528 (840)
T ss_dssp             ---CCCSSSHHHHHHHHHT-CSEEEEETTTC-------C-CH-HHHHHHHHHHHHHTCEEEEECCTTCSSCC--------
T ss_pred             ---CCcccHHHHHHhhhce-eeEEEeccccC-------C-CH-HHHHHHHHHHHHhCCEEEEeccCcchhHH--------
Confidence               2233567888998889 78999997531       1 34 78899999999999999999998654211        


Q ss_pred             HHHHHHHHHHhCCCCcEEEEccCCHHH---HHHHHccC-CCeeEEEccchhhcc---chhhh---------ccC-CCCCc
Q 019093          154 IDTILQPLIQRLPQLKVVMEHITTMDA---VKFVESCK-EGFVAATVTPQHLVL---NRNAL---------FQG-GLRPH  216 (346)
Q Consensus       154 v~~~l~~~la~~~g~~lhi~HvSt~~~---l~~i~~ak-g~~vt~Et~ph~L~l---~~~~~---------~~~-~~~~~  216 (346)
                      +..    .++...+...|..|......   .++++.+. ...+...+.+++...   ..+.+         ... ..+..
T Consensus       529 vee----~laA~~g~~~h~~~~e~~~~~~A~dii~~~~~a~~l~~~t~~~~~~~~~~~~e~l~~~~~~~~l~~~i~ed~~  604 (840)
T 4gy7_A          529 VEH----SIAAFKGRTIHTYHSEGAGGGHAPDIIKVCGIKNVLPSSTNPTRPLTSNTIDEHLDMLMVCHHLDREIPEDLA  604 (840)
T ss_dssp             HHH----HHHHHTTCCEEETTTTSTTSCSTTTGGGGGGCTTEEEEEESTTSSCBTTHHHHHHHHHHHHTTCCTTSHHHHH
T ss_pred             HHH----HHHhhcCCcccceeccccccccchHHHHHhhcccceeeEeeccchhhhhhhhhhheeEEeeeccCccchhhhh
Confidence            111    22333466777777664322   22333222 122222222221110   00000         000 00235


Q ss_pred             eEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHH--------HHHhcCCHHH
Q 019093          217 NYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAK--------VFEEMGALDK  288 (346)
Q Consensus       217 ~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~--------~~~~~~~l~~  288 (346)
                      +.++||+|...+.+++|..+  |.+++ ++|||+|+....|....      ..+........        ....+.++++
T Consensus       605 ~~~s~~~~~~~a~~~ll~dl--Gvi~~-isSD~~p~~~~~e~~~~------~~~~a~~~~~~~g~~~~e~~~~~~Lsl~e  675 (840)
T 4gy7_A          605 FAHSRIRKKTIAAEDVLNDI--GAISI-ISSDSQAMGRVGEVISR------TWQTADKMKAQTGPLKCDSSDNDNFRIRR  675 (840)
T ss_dssp             HHHHHSCHHHHHHHHHHHHT--TSSCE-EECCBTTTBCGGGHHHH------HHHHHHHHHHHHCSCTTSCSSCCHHHHHH
T ss_pred             hccCcCCccchhHHHHHHhC--CCeEE-Eeccccccccccccchh------hhcccccchhhcccchhhhhhcCCCCHHH
Confidence            66789999888888999877  99999 99999999766653210      00111110000        0011236889


Q ss_pred             HHHHHchhhhhhcCC-CC-------CCccEEEEe-cceeecC
Q 019093          289 LEAFTSFNGPDFYGL-PR-------NTSKIKLTK-IPWKVPE  321 (346)
Q Consensus       289 lv~~~s~nPAki~gl-~~-------kdAdlvi~d-~~~~v~~  321 (346)
                      ++++++.|||++||| ++       |+||||||| ..+-++.
T Consensus       676 AIr~aTiNPAraLGLddr~GSIEpGK~ADLVLfDPa~FGvKP  717 (840)
T 4gy7_A          676 YIAKYTINPAIANGFSQYVGSVEVGKLADLVMWKPSFFGTKP  717 (840)
T ss_dssp             HHHTTTHHHHHHHTCTTTSSSSCTTSBCCEEEECGGGTTTCC
T ss_pred             HHHHHHHHHHHHhCCCCCccccCCCCcceEEEECchHcCCCC
Confidence            999999999999999 44       289999999 5444433

>4ubp_C Protein (urease (chain C)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.92.1.1 c.1.9.2 PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 1ie7_C*

Probab=99.77  E-value=7.5e-19  Score=177.05  Aligned_cols=265  Identities=13%  Similarity=0.062  Sum_probs=158.7

Q ss_pred             eEEecCccccceecCC-CccccccccccCCceeEEE-------eCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSVSHYGRAI-------VMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMT   73 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~sGGvTtvv-------~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~   73 (346)
                      ++|+||+||+|||+++ +..    -....||+||++       +|||+.|..+....++.+.+.++. ..  +||++++.
T Consensus       127 ~~v~PG~ID~HvH~~~Pg~~----~aAl~gGvTTvv~gg~~p~~~~n~~p~~~~~~~l~~~l~aa~~-~~--v~~~~~g~  199 (570)
T 4ubp_C          127 KIVTAGGIDTHVHFINPDQV----DVALANGITTLFGGGTGPAEGSKATTVTPGPWNIEKMLKSTEG-LP--INVGILGK  199 (570)
T ss_dssp             CEEEECEEEEEEECCCTTHH----HHHHHTTEEEEEEECCSSCHHHHHSSCCCHHHHHHHHHHHHTT-CS--SEEEEEEE
T ss_pred             CEEeeCEEEcccCCCCcchH----HHHHhcCCeEEEecCccccccCCCcCCCCcHHHHHHHHHHhhh-CC--eeEEEEec
Confidence            4899999999999998 532    234459999999       688888888887777766665433 33  89999886


Q ss_pred             EEeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHH
Q 019093           74 LYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVF  153 (346)
Q Consensus        74 ~~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~a  153 (346)
                      .  +.+ +.+++.++.++| +.+||+|+.+       +. +. ..++++|++++++|.++++|||+... .+       .
T Consensus       200 ~--~~~-~l~el~el~~aG-a~gfK~~~~~-------~~-~~-~~L~~aL~~A~~~g~~V~iHae~l~e-~g-------~  258 (570)
T 4ubp_C          200 G--HGS-SIAPIMEQIDAG-AAGLKIHEDW-------GA-TP-ASIDRSLTVADEADVQVAIHSDTLNE-AG-------F  258 (570)
T ss_dssp             C--CCS-SHHHHHHHHHHT-CCEEEEEGGG-------CC-CH-HHHHHHHHHHHHHTCEEEEECCTTCS-SC-------C
T ss_pred             c--CCc-CHHHHHHHHHcC-CCeEeeccCC-------CC-CH-HHHHHHHHHHHHcCCEEEEEcCCcch-hh-------H
Confidence            4  443 688999999999 7899999743       12 44 78999999999999999999995432 11       1


Q ss_pred             HHHHHHHHHHhCCCCcEEEEccCCHHH---HHHHHccCCCeeEEEcc-c---hhhccchhhhccCCCCCceEEeCCC---
Q 019093          154 IDTILQPLIQRLPQLKVVMEHITTMDA---VKFVESCKEGFVAATVT-P---QHLVLNRNALFQGGLRPHNYCLPVL---  223 (346)
Q Consensus       154 v~~~l~~~la~~~g~~lhi~HvSt~~~---l~~i~~akg~~vt~Et~-p---h~L~l~~~~~~~~~~~~~~k~~PPL---  223 (346)
                      +...    ++...|.++|..|+.....   =+.++.+...+|..-.+ |   |-.-.-++.+.-.  -.....+|-+   
T Consensus       259 Veda----lea~~Gr~ih~~HiEgag~~hapd~i~~~~~~~vlps~t~Pt~p~~~n~~~e~ld~l--~v~hhl~~~i~~D  332 (570)
T 4ubp_C          259 LEDT----LRAINGRVIHSFHVEGAGGGHAPDIMAMAGHPNVLPSSTNPTRPFTVNTIDEHLDML--MVCHHLKQNIPED  332 (570)
T ss_dssp             HHHH----HHHHTTCCEEETTTTSTTSSSTTTGGGGGGSTTEEEBCCSTTSSCBTTHHHHHHHHH--HHHHTCCTTSHHH
T ss_pred             HHHH----HHHhCCCceeEEEecccccccChHHHHHhccCCccccccCCCCCcccchhHHhhhhe--eeecccCccccch
Confidence            1122    2223477889888864322   24444443234443321 1   1100000000000  0000011110   


Q ss_pred             ------CChhhHHHHHH-HHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHH-----HHH----------
Q 019093          224 ------KREIHRQAVVS-AVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAK-----VFE----------  281 (346)
Q Consensus       224 ------R~~~d~~aL~~-al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~-----~~~----------  281 (346)
                            |-+.++.+=|+ .+..|.+-+ ++||......         .|    |...+.+..     ...          
T Consensus       333 ~~~a~~Rir~~~i~a~~~L~d~G~~v~-~gSD~p~~~~---------~g----e~~~~~~~~a~~~~~~rg~l~~~~~~~  398 (570)
T 4ubp_C          333 VAFADSRIRPETIAAEDILHDLGIISM-MSTDALAMGR---------AG----EMVLRTWQTADKMKKQRGPLAEEKNGS  398 (570)
T ss_dssp             HHHHHHHSCHHHHHHHHHHHHTTSSCB-CCCCBTTSSC---------TT----CHHHHHHHHHHHHHHHHCSCTTCCSSC
T ss_pred             hHHHHhhhhhhccccccchhhcCCEEE-EECcccccCC---------cC----cccCcHHHHHHHHHHhcCCCCCccccc
Confidence                  00122233333 355688888 8999632210         01    111111111     000          


Q ss_pred             hcCCHHHHHHHHchhhhhhcCCCC--------CCccEEEEe
Q 019093          282 EMGALDKLEAFTSFNGPDFYGLPR--------NTSKIKLTK  314 (346)
Q Consensus       282 ~~~~l~~lv~~~s~nPAki~gl~~--------kdAdlvi~d  314 (346)
                      ++.++++.++..+.|||+.+|+..        |.|||++||
T Consensus       399 ~~~~~~eal~~~T~~~A~~lg~~~~~Gsi~~Gk~ADlvvld  439 (570)
T 4ubp_C          399 DNFRLKRYVSKYTINPAIAQGIAHEVGSIEEGKFADLVLWE  439 (570)
T ss_dssp             CHHHHHHHHHTTTHHHHHHHTCTTTSSSCCTTSBCCEEEEC
T ss_pred             cCCCHHHHHHHHhHHHHHHhCCCCCCcccCCCCccCEEEEC
Confidence            112478999999999999999842        289999998

>4ep8_C Urease subunit alpha; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1ef2_A* 4epb_C* 4epd_C* 4epe_C* 1ejx_C* 1ejw_C* 1fwj_C* 1kra_C 2kau_C* 1a5k_C 1ejv_C* 1ejt_C* 1eju_C* 1ejs_C* 1a5m_C 1a5n_C 1ejr_C* 1a5l_C 1a5o_C 1fwa_C* ...

Probab=99.77  E-value=2.2e-21  Score=196.95  Aligned_cols=284  Identities=12%  Similarity=-0.038  Sum_probs=172.4

Q ss_pred             eEEecCccccceecCC-CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLY   75 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~   75 (346)
                      ++|+||+||+|+|++. +...+++..+.+     ++.+....||++.++.  .. ............  .+++++++.. 
T Consensus       123 kiV~PG~ID~HvH~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~t~~--~~-~~~~~~~a~~~~--~~~~~~~~~~-  196 (566)
T 4ep8_C          123 KIVTAGGIDTHIHWICPQQAEEALVSGVTTMVGGGTGPAAGTHATTCTPG--PW-YISRMLQAADSL--PVNIGLLGKG-  196 (566)
T ss_dssp             CEEEECEEEEEEECSCTTHHHHHHHHTEEEEEEECSSSSHHHHHCCCCCH--HH-HHHHHHHHHTTS--SSEEEEEEEC-
T ss_pred             CEEEcCEEEecccccCCCccchhhhhhHHHHhhCceEEEEecCCCCCchH--HH-HHHHHHHhcccc--ceeeeeeccc-
Confidence            5899999999999998 555555444322     3444445566655432  22 222222222222  3789887764 


Q ss_pred             eCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCCh---------
Q 019093           76 LTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDI---------  146 (346)
Q Consensus        76 ~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~---------  146 (346)
                       +. .....+..+..++ +.++|.+..+.        ... ..+...+......+....+|++........         
T Consensus       197 -~~-~~~~~~~~~~~a~-~~g~~~~~~~~--------~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~e~~~~~~~~  264 (566)
T 4ep8_C          197 -NV-SQPDALREQVAAG-VIGLKIHEDWG--------ATP-AAIDCALTVADEMDIQVALHSDTLNESGFVEDTLAAIGG  264 (566)
T ss_dssp             -CC-SCHHHHHHHHHHT-CSEEEEEGGGC--------CCH-HHHHHHHHHHHHHTCEEEEECCTTCSSCCHHHHHHHHTT
T ss_pred             -cc-ccchhhHHHhhhc-ccccccccccc--------ccc-hhhhhHhHHHHHhcchhhhhhhhHHHHHHHHhhHhhccC
Confidence             33 3566677777777 68999886431        122 566777888888899999999976643210         


Q ss_pred             -----------hhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCC
Q 019093          147 -----------FDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRP  215 (346)
Q Consensus       147 -----------~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~  215 (346)
                                 ...+..++.+..  ..+.....+.++.|.++...++...       ..+++.||+.++.....     .
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~--~~a~~~~~~~~~~~~~~~~~~~e~~-------~~~~~~h~l~~~~~~~~-----~  330 (566)
T 4ep8_C          265 RTIHTFHTEGAGGGHAPDIITAC--AHPNILPSSTNPTLPYTLNTIDEHL-------DMLMVCHHLDPDIAEDV-----A  330 (566)
T ss_dssp             CCEEETTTTSTTSSSTTTGGGGG--GCTTEEEEECSTTSSCBTTHHHHHH-------HHHHHHHTCCTTCHHHH-----H
T ss_pred             ccccccccccchhHHHHHHHHHH--HHHhhcCCceeehhHHHHHHhhccc-------ceEEEeecccCChhhHH-----h
Confidence                       011222233333  3344445566667777766665443       34578899988866543     1


Q ss_pred             ceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHhc--CCHHHHHHHH
Q 019093          216 HNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEM--GALDKLEAFT  293 (346)
Q Consensus       216 ~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~~--~~l~~lv~~~  293 (346)
                      ..+..++   .+.....|..+..|.+++ ++|||+|+....|.......+..+.+..+..++......  .+++++++++
T Consensus       331 ~~~~~~~---~~~~~~~~~l~~~G~~~~-i~sD~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~gls~~eal~~a  406 (566)
T 4ep8_C          331 FAESRIR---RETIAAEDVLHDLGAFSL-TSSDSQAMGRVGEVILRTWQVAHRMKVQRGALAEETGDNDNFRVKRYIAKY  406 (566)
T ss_dssp             HHHHHCC---HHHHHHHHHHHHHTSSCE-ECCCTTSSSCTTCHHHHHHHHHHHHHHHHCSCTTCCSSSCHHHHHHHHGGG
T ss_pred             hccCCCc---ccchHHHHHHHhCCCcce-EeecccccccccccccccCCCCchHHHHHHHHHHhhhhcCCCCHHHHHHHH
Confidence            2333333   234455666677899999 999999998766632111112223333333332222222  3688999999


Q ss_pred             chhhhhhcCC-CCC-------CccEEEEe-cceeecC
Q 019093          294 SFNGPDFYGL-PRN-------TSKIKLTK-IPWKVPE  321 (346)
Q Consensus       294 s~nPAki~gl-~~k-------dAdlvi~d-~~~~v~~  321 (346)
                      +.||||+||| +++       +||||||| ..+-++.
T Consensus       407 TiNPAralGL~d~iGSIevGK~ADLVL~Dp~~f~vkP  443 (566)
T 4ep8_C          407 TINPALTHGIAHEVGSIEVGKLADLVVWSPAFFGVKP  443 (566)
T ss_dssp             THHHHHHTTCTTTSSSSCTTSBCCEEEECGGGTTTSC
T ss_pred             HHHHHHHhCCCCCCcCCCCCCCCCEEEECccccCCCe
Confidence            9999999999 442       99999999 6555543

>1p1m_A Hypothetical protein TM0936; putative metal dependent hydrolase, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: b.92.1.4 c.1.9.9 PDB: 2plm_A* 1j6p_A

Probab=99.76  E-value=1.2e-18  Score=168.84  Aligned_cols=116  Identities=14%  Similarity=0.085  Sum_probs=80.7

Q ss_pred             EEccchhh---ccchhhhccCCCCCceEEeCC--CCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccc
Q 019093          194 ATVTPQHL---VLNRNALFQGGLRPHNYCLPV--LKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYN  268 (346)
Q Consensus       194 ~Et~ph~L---~l~~~~~~~~~~~~~~k~~PP--LR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g  268 (346)
                      .++++|++   .++++++..     ...++|+  +|....+..+|+++++|.+.+ ++|||.++....+         +-
T Consensus       226 ~~~~~H~~~~~~~~~~~~~~-----~~~~~p~~~~~~~~~~~~~~~~~~~Gv~~~-lgtD~~~~~~~~~---------~~  290 (406)
T 1p1m_A          226 AAHCVHLPERYFGVLKDIPF-----FVSHNPASNLKLGNGIAPVQRMIEHGMKVT-LGTDGAASNNSLN---------LF  290 (406)
T ss_dssp             EEECTTCCGGGTTTTTTSSE-----EEEECHHHHHHTTCCCCCHHHHHHTTCEEE-ECCCCTTTTSCCC---------HH
T ss_pred             eeEeeeccCcccCCHHHHHH-----HHHhCcHHHhhcCCCcCcHHHHHhCCCeEE-EECCCCcCCCCCC---------HH
Confidence            38899999   888887643     1156664  222233457899999999999 9999988642211         12


Q ss_pred             hhHHHHHHHHHHH--hcCCHHHHHHHHchhhhhhcCCCC------CCccEEEEe--cceeecCCcc
Q 019093          269 APVALSLYAKVFE--EMGALDKLEAFTSFNGPDFYGLPR------NTSKIKLTK--IPWKVPEAFS  324 (346)
Q Consensus       269 ~e~~lp~l~~~~~--~~~~l~~lv~~~s~nPAki~gl~~------kdAdlvi~d--~~~~v~~~~~  324 (346)
                      .|..+++++....  ...++++++++++.||||+||++.      |+|||+|+|  ..|.++.++.
T Consensus       291 ~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~G~l~~G~~ADlvv~d~~~~~~~~~~~~  356 (406)
T 1p1m_A          291 FEMRLASLLQKAQNPRNLDVNTCLKMVTYDGAQAMGFKSGKIEEGWNADLVVIDLDLPEMFPVQNI  356 (406)
T ss_dssp             HHHHHHHHHHHTTCTTSSCHHHHHHHHTHHHHHHHTCSCSSCCTTSBCCEEEEECCSGGGCSGGGH
T ss_pred             HHHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHhCCCCcccCCCCcccEEEEeCCccccCCccCh
Confidence            2566666654332  245899999999999999999843      389999999  5565554443

>1ra0_A Cytosine deaminase; alpha-beta barrel, hexamer, conformation change, D314G mutant, hydrolase; 1.12A {Escherichia coli} SCOP: b.92.1.2 c.1.9.5 PDB: 1r9x_A 1ra5_A 1r9y_A 1r9z_A 1rak_A 3r0d_A* 3o7u_A* 3rn6_A* 1k6w_A 1k70_A 3g77_A

Probab=99.74  E-value=4e-18  Score=166.46  Aligned_cols=270  Identities=12%  Similarity=0.062  Sum_probs=147.6

Q ss_pred             eEEecCccccceecCC----Ccc----------------------cccccccc---------CCceeEEEeCCCCCCCCC
Q 019093            2 ELTLTQPDDWHLHLRD----GDL----------------------LKAVVPHS---------VSHYGRAIVMPNLKPPIT   46 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~----g~~----------------------~ke~~~s~---------sGGvTtvv~mPnt~p~~~   46 (346)
                      ++|+||+||+|+|+..    +..                      ..|++..+         .+|+|||.+|+++..+..
T Consensus        55 ~~v~PGlID~H~Hl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~  134 (430)
T 1ra0_A           55 GLVIPPFVEPHIHLDTTQTAGQPNWNQSGTLFEGIERWAERKALLTHDDVKQRAWQTLKWQIANGIQHVRTHVDVSDATL  134 (430)
T ss_dssp             CEEESCEEEEEECTTTTTCTTSSSCCSSCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTEEEEEEEEECCSTTC
T ss_pred             CEecccccccccchhhhhhcCCCcCCCCCCHHHHHHHhHHhhhhcCHHHHHHHHHHHHHHHHhcCccEEeeccccCChHH
Confidence            4899999999999954    111                      11333221         399999999987632221


Q ss_pred             cHHHHHHHHHHHHh-hCCCCccEEEEEEEEeC-----CCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCC-ccChHHHH
Q 019093           47 TTAAAVAYRESILK-ALPASSNFTPLMTLYLT-----DTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDG-VTDLFGKC  119 (346)
Q Consensus        47 ~~~~~~~~~~~~~~-~~~~~vd~~~~~~~~~~-----~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~-~~d~~~~l  119 (346)
                        ..++...+..++ ...  +++.++ ++ ..     .....+.+.++.+.| . ++..+..   . .... ..+. +.+
T Consensus       135 --~~~~~~~~~~~~~~~~--~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~g-~-~~~~~~~---~-~~~~~~~~~-~~l  201 (430)
T 1ra0_A          135 --TALKAMLEVKQEVAPW--IDLQIV-AF-PQEGILSYPNGEALLEEALRLG-A-DVVGAIP---H-FEFTREYGV-ESL  201 (430)
T ss_dssp             --HHHHHHHHHHHHHTTT--CEEEEE-EE-CTTCSSSSTTHHHHHHHHHHTT-C-SEECCCG---G-GSSSHHHHH-HHH
T ss_pred             --HHHHHHHHHHHhhhhh--EEEEEE-ec-CCcccccCchHHHHHHHHHHhC-C-CeEeeee---c-ccccccccH-HHH
Confidence              223333332222 122  566543 22 11     111123466666665 1 2222210   0 1111 0123 688


Q ss_pred             HHHHHHhHHcCCcEEEecCCCC-CCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCH---------HHHHHHHccCC
Q 019093          120 VHVLEEMVEQNMPLLVHGEVTD-PIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTM---------DAVKFVESCKE  189 (346)
Q Consensus       120 ~~~l~~~~~~g~~v~vHaE~~~-~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~---------~~l~~i~~akg  189 (346)
                      .++++.+++.|+++.+|++... ......  + ..+....  .+ .. +.+++|.|++..         +.++.+++.  
T Consensus       202 ~~~~~~A~~~g~~v~~H~~e~~~~~~~~~--~-~~~~~~~--~~-g~-~~~~~i~H~~~~~~~~~~~~~~~i~~~~~~--  272 (430)
T 1ra0_A          202 HKTFALAQKYDRLIDVHCDEIDDEQSRFV--E-TVAALAH--HE-GM-GARVTASHTTAMHSYNGAYTSRLFRLLKMS--  272 (430)
T ss_dssp             HHHHHHHHHHTCEEEEEECCSSCTTCCHH--H-HHHHHHH--HH-TC-GGGEEEEECGGGGGSCHHHHHHHHHHHHHH--
T ss_pred             HHHHHHHHHcCCCEEEEECCCCchhHHHH--H-HHHHHHH--Hh-CC-CCCEEEEeccccccCChHhHHHHHHHHHHc--
Confidence            9999999999999999996432 111100  1 1111111  12 23 778878887642         245555442  


Q ss_pred             CeeEEEccchh-hccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccc
Q 019093          190 GFVAATVTPQH-LVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYN  268 (346)
Q Consensus       190 ~~vt~Et~ph~-L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g  268 (346)
                       .+++++||++ +.+...      .+    .+||+|....   +++.++.|.+.+ ++|||+++...    +.  .+..-
T Consensus       273 -gv~v~~~p~~~~~~~~~------~~----~~p~~~~~~~---~~~~~~~Gv~~~-lgTD~~~~~~~----~~--~~~~~  331 (430)
T 1ra0_A          273 -GINFVANPLVNIHLQGR------FD----TYPKRRGITR---VKEMLESGINVC-FGHDGVFDPWY----PL--GTANM  331 (430)
T ss_dssp             -TCEEEECHHHHHHHTTT------TC----CSSCCCCCCC---HHHHHHTTCCEE-ECCBCSSBTTB----SC--CCCCH
T ss_pred             -CCEEEECchhhhhhccc------cC----CCCCcCCCCC---HHHHHHCCCEEE-EeCCCCcccCC----CC--CCCCH
Confidence             3677899973 333211      11    2677776554   556678899999 99999842100    00  01111


Q ss_pred             h-hHHHHHHHHHHHhcCCHHHHHHHHchhhhhhcCCCC------CCccEEEEe
Q 019093          269 A-PVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLPR------NTSKIKLTK  314 (346)
Q Consensus       269 ~-e~~lp~l~~~~~~~~~l~~lv~~~s~nPAki~gl~~------kdAdlvi~d  314 (346)
                      + |..+++.+.......++++++++++.|||++||++.      |+|||+|+|
T Consensus       332 ~~~~~~~~~~~~~~~~~~~~~al~~~T~~~A~~lg~~~G~i~~G~~ADlvv~d  384 (430)
T 1ra0_A          332 LQVLHMGLHVCQLMGYGQINDGLNLITHHSARTLNLQDYGIAAGNSANLIILP  384 (430)
T ss_dssp             HHHHHHHHHHTTCCSHHHHHGGGGGGTHHHHHHTTCSSCSSCTTSBCCEEEES
T ss_pred             HHHHHHHHHHHccCCcccHHHHHHHHHHHHHHHhCCCCcccCCCCcCCEEEEc
Confidence            1 233333322111112788999999999999999842      389999998

>2ood_A BLR3880 protein; PSI-II, PSI-2, guanine deaminase, guanine, structural genomics, protein structure initiative; HET: GUN; 2.62A {Bradyrhizobium japonicum} SCOP: b.92.1.4 c.1.9.9

Probab=99.73  E-value=3.4e-17  Score=162.43  Aligned_cols=185  Identities=11%  Similarity=-0.089  Sum_probs=111.8

Q ss_pred             HHHHHHHHHhHHc-CCcEEEecCCCCCCCChhhhHHHHHHH-------HHHHHHHh---CCCCcEEEEccC--CHHHHHH
Q 019093          117 GKCVHVLEEMVEQ-NMPLLVHGEVTDPIVDIFDREKVFIDT-------ILQPLIQR---LPQLKVVMEHIT--TMDAVKF  183 (346)
Q Consensus       117 ~~l~~~l~~~~~~-g~~v~vHaE~~~~~~~~~~~E~~av~~-------~l~~~la~---~~g~~lhi~HvS--t~~~l~~  183 (346)
                      +.+.++++.+++. |+++.+|+....       .|...+.+       .+  .+.+   ..+.+..+.|..  +.+.++.
T Consensus       214 e~l~~~~~~a~~~~g~~v~~H~~e~~-------~~~~~~~~~~g~~~~~~--~~~~~~g~~~~~~~i~H~~~~~~~~i~~  284 (475)
T 2ood_A          214 ELLKACQRLKHEHPDCWVNTHISENP-------AECSGVLVEHPDCQDYL--GVYEKFDLVGPKFSGGHGVYLSNNEFRR  284 (475)
T ss_dssp             HHHHHHHHHHHHCTTSEEEEECSCCH-------HHHHHHHHHCTTCSSHH--HHHHTTTCCSTTEEEECCTTCCHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCcEEEeeCCCh-------HHHHHHHHHcCCCccHH--HHHHHcCCCCCCcEEEEeecCCHHHHHH
Confidence            6789999999999 999999997431       12211111       22  2222   246677677766  4677777


Q ss_pred             HHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCc--cEEeecCCCCCCccccccCC
Q 019093          184 VESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSR--KFFLGTDSAPHERGRKECAC  261 (346)
Q Consensus       184 i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~I--d~~i~SDHaP~~~~~K~~~~  261 (346)
                      +++.   .+++++||++-.    .+     +   ...||+         ++++..|.+  ++ ++|||+|++..+   .+
T Consensus       285 ~~~~---g~~~~~~P~~~~----~l-----~---~~~~~~---------~~~~~~Gv~~~~~-lgTD~~~~~~~~---~~  336 (475)
T 2ood_A          285 MSKK---GAAVVFCPCSNL----FL-----G---SGLFRL---------GRATDPEHRVKMS-FGTDVGGGNRFS---MI  336 (475)
T ss_dssp             HHHH---TCEEEECHHHHH----HT-----T---CCCCCH---------HHHTCTTSCCEEE-ECCCBTTBSCCC---HH
T ss_pred             HHHc---CCEEEEChhhhh----hc-----c---cCcCCH---------HHHHhCCCCCcEE-EEccCCCCCCcC---HH
Confidence            7653   367889998522    11     1   123554         477889999  99 999998853211   00


Q ss_pred             CC-CCccchhHHHHHHHH------------HHHhcCCHHHHHHHHchhhhhhcCCC-C-C------CccEEEEe--ccee
Q 019093          262 GC-AGIYNAPVALSLYAK------------VFEEMGALDKLEAFTSFNGPDFYGLP-R-N------TSKIKLTK--IPWK  318 (346)
Q Consensus       262 ~~-~G~~g~e~~lp~l~~------------~~~~~~~l~~lv~~~s~nPAki~gl~-~-k------dAdlvi~d--~~~~  318 (346)
                      .. .....++..+|+++.            ......++++++++++.|||++||++ + +      +|||||+|  ..|.
T Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~GsL~~Gk~ADlvvld~~~~~~  416 (475)
T 2ood_A          337 SVLDDAYKVGMCNNTLLDGSIDPSRKDLAEAERNKLSPYRGFWSVTLGGAEGLYIDDKLGNFEPGKEADFVALDPNGGQL  416 (475)
T ss_dssp             HHHHHHHHHHHHHHHHSSSSSCGGGCCHHHHHHTCCCHHHHHHHTTHHHHHHTTCTTTSSSCCTTSBCCEEEECTTCSST
T ss_pred             HHHHHHHHHhcccchhccCCcccccccccccccCCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCccCEEEEeCCCccc
Confidence            00 000011222222111            01134689999999999999999994 2 2      89999999  4455


Q ss_pred             ecCCccc------cC----CcccccCCCcEE
Q 019093          319 VPEAFSF------SF----GDIIPMFAGNTL  339 (346)
Q Consensus       319 v~~~~~~------s~----~~~sp~~~G~~l  339 (346)
                      ++.++++      |+    ..|+|| +|+.+
T Consensus       417 ~~~~~~~~~~~~~s~~~~~~~~~p~-~~~~~  446 (475)
T 2ood_A          417 AQPWHQSLIADGAGPRTVDEAASML-FAVMM  446 (475)
T ss_dssp             THHHHHTTC--CCSCCSHHHHHHHH-HHHHH
T ss_pred             cccccccccccccccccccchhhHH-HHHHh
Confidence            4443322      32    248899 67766

>2p9b_A Possible prolidase; protein structure initiative II, PSI-2, amidohydrolase, structural genomics; 1.70A {Bifidobacterium longum NCC2705} SCOP: b.92.1.10 c.1.9.17

Probab=99.72  E-value=1.4e-16  Score=156.76  Aligned_cols=194  Identities=12%  Similarity=0.072  Sum_probs=116.6

Q ss_pred             HHHHHcCCeeEEEEeecCCcc-CC-----CCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHH
Q 019093           86 KLARKTGVVFAVKLYPAGATT-NS-----QDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQ  159 (346)
Q Consensus        86 ~~l~~~G~v~~~Kif~~~~~~-~~-----~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~  159 (346)
                      .++.+.| +..+|+|+.+... ..     +....+. +.+.++++.+++.|+++.+|+++..           ++...+ 
T Consensus       192 ~~~~~~g-~~~ik~~~~g~~~~~~~~~~~~~~~~~~-~~l~~~~~~a~~~g~~v~~H~~~~~-----------~i~~~~-  257 (458)
T 2p9b_A          192 AQNLKAG-VNAIKIAATGGVTDAQEIGEAGSPQMSV-EQMRAICDEAHQYGVIVGAHAQSPE-----------GVRRSL-  257 (458)
T ss_dssp             HHHHHTT-CSCEEEECSCCTTSCCCC------CCCH-HHHHHHHHHHHHTTCCEEEEECSHH-----------HHHHHH-
T ss_pred             HHHHHcC-CCEEEEEecCCcCCCCccCCCCCCcCCH-HHHHHHHHHHHHCCCeEEEEeCCHH-----------HHHHHH-
Confidence            3444566 5689999753110 00     1112234 7899999999999999999998531           233333 


Q ss_pred             HHHHhCCCCcEEEEccC--CHHHHHHHH------ccCCCeeEEEccc--hhhccchhhhccCCCCCceEEeCCCCChhhH
Q 019093          160 PLIQRLPQLKVVMEHIT--TMDAVKFVE------SCKEGFVAATVTP--QHLVLNRNALFQGGLRPHNYCLPVLKREIHR  229 (346)
Q Consensus       160 ~~la~~~g~~lhi~HvS--t~~~l~~i~------~akg~~vt~Et~p--h~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~  229 (346)
                       .    .|.. .+.|..  +.+.+++++      +. |..+.....|  +++++.... .  +.......+||.|.+.++
T Consensus       258 -~----~G~~-~i~H~~~~~~~~~~~~~~~~~~~~~-g~~v~p~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~  327 (458)
T 2p9b_A          258 -L----AGVD-TIEHGSVLDDELIGMFRHNPNALRG-YSALIPTLSAGLPLTLLGQDV-T--GITDIQLENSKNVVGGMV  327 (458)
T ss_dssp             -H----HTCS-EEEECCCCCHHHHHHHHCCTTSTTS-CCEEECCHHHHHHHHHSCHHH-H--CCCHHHHHHHHHHHHHHH
T ss_pred             -H----cCCC-EEEECCCCCHHHHHHHhcccccccC-CeEEEeecchhhHHHhhhccc-c--cCCHHHHHHHHHHHHHHH
Confidence             1    1433 355554  477888888      32 4544333322  223333211 0  111122334566667778


Q ss_pred             HHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHH-hcCCHHHHHHHHchhhhhhcCCCC---
Q 019093          230 QAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFE-EMGALDKLEAFTSFNGPDFYGLPR---  305 (346)
Q Consensus       230 ~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~-~~~~l~~lv~~~s~nPAki~gl~~---  305 (346)
                      ..+|+++++|...+ ++|||.+        ++...|....|..  .   ... ...++++++++++.|||+++|++.   
T Consensus       328 ~~~~~~~~~Gv~~~-~gtD~~~--------~~~~~~~~~~e~~--~---~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G  393 (458)
T 2p9b_A          328 SGARQAHEAGLMIG-VGTDTGM--------TFVPQYATWRELE--L---LVAYAGFSPAEALHAATAVNASILGVDAETG  393 (458)
T ss_dssp             HHHHHHHHTTCCBC-CCCCTTS--------TTSCTTCHHHHHH--H---HHHHHCCCHHHHHHHHTHHHHHHTTCTTTSS
T ss_pred             HHHHHHHHCCCeEE-EecCCCC--------CCCccccHHHHHH--H---HHHhcCCCHHHHHHHHHHHHHHHhCCcCCCC
Confidence            89999999999999 8999842        1112233222322  1   112 246999999999999999999942   


Q ss_pred             -----CCccEEEEe-cce
Q 019093          306 -----NTSKIKLTK-IPW  317 (346)
Q Consensus       306 -----kdAdlvi~d-~~~  317 (346)
                           |+|||+|+| .++
T Consensus       394 si~~Gk~ADlvvld~~p~  411 (458)
T 2p9b_A          394 SLEVGKSADLLVLNANPL  411 (458)
T ss_dssp             SCCTTSBCCEEEESSCTT
T ss_pred             ccCCCCcCCEEEECCCch
Confidence                 289999999 543

>2i9u_A Cytosine/guanine deaminase related protein; protein structure initiative II (PSI-II), amidohydrol guanine deaminase; HET: GUN; 2.05A {Clostridium acetobutylicum} SCOP: b.92.1.4 c.1.9.9

Probab=99.72  E-value=9.9e-17  Score=156.96  Aligned_cols=160  Identities=11%  Similarity=0.054  Sum_probs=98.8

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHH-------HHHH-HHHhCCC-CcEEEEccC--CHHHHHHHH
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDT-------ILQP-LIQRLPQ-LKVVMEHIT--TMDAVKFVE  185 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~-------~l~~-~la~~~g-~~lhi~HvS--t~~~l~~i~  185 (346)
                      +.+.++++.+++.|+++.+|+.+..       .|...+.+       .++. .-....+ .+..+.|..  +.+.+++++
T Consensus       210 ~~l~~~~~~a~~~g~~v~~H~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~H~~~~~~~~~~~l~  282 (439)
T 2i9u_A          210 ELMDGLGKLSYKYRLPVQSHLSENL-------DEIAVVKSLHKKSNFYGEVYDKFGLFGNTPTLMAHCIHSSKEEINLIK  282 (439)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEESCCH-------HHHHHHHHHCTTCSSHHHHHHHTTCSSSSCEEEEECCSCCHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCcEEEeecCCh-------HHHHHHHHHhCCCCCHHHHHHHcCCCCCCCeEEEEEecCCHHHHHHHH
Confidence            7899999999999999999998642       11111110       1110 1112233 455566654  467788887


Q ss_pred             ccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCC
Q 019093          186 SCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAG  265 (346)
Q Consensus       186 ~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G  265 (346)
                      +.   .+++++||++-+      .   ++.   ..||+|         +.+++|.+.+ ++|||.|...          .
T Consensus       283 ~~---g~~~~~~p~~~~------~---l~~---~~~~~~---------~~~~~Gv~~~-lgtD~~~~~~----------~  327 (439)
T 2i9u_A          283 RN---NVTIVHCPTSNF------N---LGS---GMMPVR---------KYLNLGINVV-LGSDISAGHT----------C  327 (439)
T ss_dssp             HT---TCEEEECHHHHH------H---TTC---CCCCHH---------HHHHTTCEEE-ECCCBTTBCC----------S
T ss_pred             Hc---CCEEEECccchh------h---ccc---ccCCHH---------HHHHCCCcEE-EecCCCCCCC----------c
Confidence            54   367889998621      1   111   245543         5678899999 9999977320          0


Q ss_pred             ccchhHHHHHHHHHHH--------hcCCHHHHHHHHchhhhhhcCCCC------CCccEEEEe--cceee
Q 019093          266 IYNAPVALSLYAKVFE--------EMGALDKLEAFTSFNGPDFYGLPR------NTSKIKLTK--IPWKV  319 (346)
Q Consensus       266 ~~g~e~~lp~l~~~~~--------~~~~l~~lv~~~s~nPAki~gl~~------kdAdlvi~d--~~~~v  319 (346)
                      -.--|..+.+.+....        ...++++++++++.|||++|| ..      |+|||+|+|  ..|.+
T Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lg-~~Gsl~~G~~ADlvvld~~~~~~~  396 (439)
T 2i9u_A          328 SLFKVIAYAIQNSKIKWQESGKKDMFLSTSEAFYMATKKGGSFFG-KVGSFEEGYDFDALVINDSNLYPE  396 (439)
T ss_dssp             CHHHHHHHHHHHHHHHHHHTTSCSCCCCHHHHHHHHTHHHHTTTS-SCSSCSTTCBCCEEEECCTTSCGG
T ss_pred             CHHHHHHHHHHHhccccccccCCCCCCCHHHHHHHHHHHHHHHhc-cCCccCCCCccCEEEEeCCCcccc
Confidence            0111333443333222        345899999999999999998 32      389999999  44444

>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A*

Probab=99.71  E-value=8.9e-16  Score=148.39  Aligned_cols=285  Identities=12%  Similarity=0.095  Sum_probs=158.2

Q ss_pred             eEEecCccccceecCC-Ccccccccc----------------ccCCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCC
Q 019093            2 ELTLTQPDDWHLHLRD-GDLLKAVVP----------------HSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPA   64 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g~~~ke~~~----------------s~sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~   64 (346)
                      ++|+||+||+|+|+.. +...++++.                ...+||||+++|+++.+   ....++   +..+.....
T Consensus        54 ~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~---~~~~~~---~~~~~~~~~  127 (408)
T 3be7_A           54 LILIPGLMDSHVHIVGNDSKGEESIADSSHMGTVWGVVNAEKTLMAGFTTVRNVGAANY---ADVSVR---DAIERGVIN  127 (408)
T ss_dssp             EEEEECEEEEEECCSSCCCCSGGGTTCCTHHHHHHHHHHHHHHHTTTEEEEEECCCSTT---HHHHHH---HHHHTTSSC
T ss_pred             CEECcCceeeeEcccCCCCcchhhhcCCHHHHHHHHHHHHHHHHHcCCCEEEeCCCccc---cCHHHH---HHHHCCCCC
Confidence            5899999999999973 211112221                12499999999987543   111222   222211100


Q ss_pred             CccEEEEE-EEEeC------C-------------CCCHHHHHHHH----HcCCeeEEEEeecCCc-cCC---CCCccChH
Q 019093           65 SSNFTPLM-TLYLT------D-------------TTSPDEIKLAR----KTGVVFAVKLYPAGAT-TNS---QDGVTDLF  116 (346)
Q Consensus        65 ~vd~~~~~-~~~~~------~-------------~~~~~el~~l~----~~G~v~~~Kif~~~~~-~~~---~~~~~d~~  116 (346)
                      ..++...+ .+...      +             ....+++.++.    +.| ...+|+|..+.. +..   +....+. 
T Consensus       128 ~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~ik~~~~g~~~~~~~~~g~~~~~~-  205 (408)
T 3be7_A          128 GPTMLVSGPALGITGGHCDHNLLPPEFNYSSEGVVDSPWEARKMVRKNRKYG-ADLIKFCATGGVMSRNTDVNAKQFTL-  205 (408)
T ss_dssp             CCEEEECCSCBBCTTSTTSCCCSCTTTCCCCTTBCCSHHHHHHHHHHHHHTT-CSEEEEECBCCSSSSSCCTTSBCSCH-
T ss_pred             CCEEEEccceeeccCCCCccccccccccccCCcccCCHHHHHHHHHHHHhcC-CCEEEEEecCCcCCCCCCCCCCCCCH-
Confidence            01222211 00000      0             01244554433    456 568999964311 100   0112244 


Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccC--CHHHHHHHHccCCCeeEE
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHIT--TMDAVKFVESCKEGFVAA  194 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvS--t~~~l~~i~~akg~~vt~  194 (346)
                      +.+.++++.+++.|+++.+|+.+..           .+...+  .    .|+. .|.|..  +.+.++.+++ +|..+  
T Consensus       206 ~~l~~~~~~A~~~g~~v~~H~~~~~-----------~i~~~~--~----~g~~-~i~H~~~~~~~~i~~~~~-~g~~v--  264 (408)
T 3be7_A          206 EEMKAIVDEAHNHGMKVAAHAHGLI-----------GIKAAI--K----AGVD-SVEHASFIDDETIDMAIK-NNTVL--  264 (408)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEECSHH-----------HHHHHH--H----HTCS-EEEECTTCCHHHHHHHHH-TTCEE--
T ss_pred             HHHHHHHHHHHHCCCEEEEEeCCHH-----------HHHHHH--H----cCCC-EEEECCCCCHHHHHHHHH-CCCEE--
Confidence            7899999999999999999998631           233333  1    2444 477776  4677777765 25544  


Q ss_pred             EccchhhccchhhhccCCCCCceEEeCCCCCh------hhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccc
Q 019093          195 TVTPQHLVLNRNALFQGGLRPHNYCLPVLKRE------IHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYN  268 (346)
Q Consensus       195 Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~------~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g  268 (346)
                        +|+.+.  .+.+..  .+...++.|+++.+      .++..+++.+..|...+ ++|||.+..          .|...
T Consensus       265 --~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~-~gTD~~~~p----------~~~~~  327 (408)
T 3be7_A          265 --SMDIFV--SDYILG--EGAKAGIREESLNKERLVGKKQRENFMNAHRRGAIIT-FGTDAGIFD----------HGDNA  327 (408)
T ss_dssp             --ECCCST--HHHHHT--TTTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTCCEE-CCCCBTTBC----------TTCGG
T ss_pred             --eeeecH--HHHhhh--hccccCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEE-EECCCCCCC----------CchHH
Confidence              344222  222211  12234456666543      23567899999999998 999995421          13233


Q ss_pred             hhHHHHHHHHHHHhcCCHHHHHHHHchhhhhhcCCCC-------CCccEEEEe-cceeecCCccccCCcccccCCCcEEE
Q 019093          269 APVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLPR-------NTSKIKLTK-IPWKVPEAFSFSFGDIIPMFAGNTLE  340 (346)
Q Consensus       269 ~e~~lp~l~~~~~~~~~l~~lv~~~s~nPAki~gl~~-------kdAdlvi~d-~~~~v~~~~~~s~~~~sp~~~G~~l~  340 (346)
                      .|..+  +   .....++++++++++.|||++||+++       |+|||+|+| .++. +.+.+ .+...+-. +|+.+.
T Consensus       328 ~~~~~--~---~~~gls~~~al~~~T~n~A~~lgl~~~G~i~~G~~ADlvvld~~p~~-~~~~~-~~v~~v~~-~G~~v~  399 (408)
T 3be7_A          328 KQFAY--M---VEWGMTPLEAIQASTIKTATLFGIENIGQIKEGFDADIVGVIENPLA-NIRTL-EEVAFVMK-EGKVYK  399 (408)
T ss_dssp             GHHHH--H---HHTTCCHHHHHHTTTHHHHHHHTCSSCSSCCTTSBCCEEEESSCTTT-CGGGT-TSCCEEEE-TTEEEE
T ss_pred             HHHHH--H---HHcCCCHHHHHHHHHHHHHHHhCCCcccccCCCCccCEEEECCCchh-hHHHh-hceeEEEE-CCEEEe
Confidence            33322  1   12346999999999999999999852       289999999 5443 11111 23444545 465543

>2paj_A Putative cytosine/guanine deaminase; NYSGXRC, PSI-II, amidohydrolase, sargasso SEA, enviro sample, structural genomics; 2.70A {Unidentified} SCOP: b.92.1.4 c.1.9.9

Probab=99.69  E-value=3.3e-16  Score=155.34  Aligned_cols=278  Identities=12%  Similarity=-0.012  Sum_probs=142.7

Q ss_pred             eEEecCccccceecCCC----cc----------------------ccccccc---------cCCceeEEEeCCCCCCCCC
Q 019093            2 ELTLTQPDDWHLHLRDG----DL----------------------LKAVVPH---------SVSHYGRAIVMPNLKPPIT   46 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~g----~~----------------------~ke~~~s---------~sGGvTtvv~mPnt~p~~~   46 (346)
                      ++|+||+||+|+|+..+    ..                      ..|++..         ..+||||+++|+++.|...
T Consensus        66 ~~v~PG~ID~H~H~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~  145 (492)
T 2paj_A           66 CVIYPAWVNTHHHLFQSLLKGEPAGLDATLTPWLAATPYRFRALFDERRFRLAARIGLIELARSGCATVADHNYVYYPGM  145 (492)
T ss_dssp             CEEEECEECCCCCGGGGGCCSCC-----------------CGGGCCHHHHHHHHHHHHHHHHTTTEEEEEECCCCCCTTC
T ss_pred             cEEeeCccccccChhhHhhcCccCCCCCCHHHHHHhcccchhhcCCHHHHHHHHHHHHHHHHhcCcEEEEechhhccccc
Confidence            48999999999998641    10                      0133322         2499999999997655432


Q ss_pred             cHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCC------------C----CHHHHHHHHHc--CCe--eEEEEeecCCcc
Q 019093           47 TTAAAVAYRESILKALPASSNFTPLMTLYLTDT------------T----SPDEIKLARKT--GVV--FAVKLYPAGATT  106 (346)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~------------~----~~~el~~l~~~--G~v--~~~Kif~~~~~~  106 (346)
                      +.+.++.+.+..++ ..  ++..+..+....+.            .    ..+++.++.+.  +..  ..+|++++.   
T Consensus       146 ~~~~~~~~~~~~~~-~g--~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  219 (492)
T 2paj_A          146 PFDSSAILFEEAEK-LG--LRFVLLRGGATQTRQLEADLPTALRPETLDAYVADIERLAARYHDASPRAMRRVVMAP---  219 (492)
T ss_dssp             SSCHHHHHHHHHHH-TT--CEEEEEECCCSCCCSCSTTSCGGGCCCCHHHHHHHHHHHHHHTCCCSTTCSEEEEECC---
T ss_pred             ccchHHHHHHHHHH-cC--CEEEEEchhhcccccccccCCccccccCHHHHHHHHHHHHHHhccCCCCCceEEEEec---
Confidence            33344455444433 22  44433222110010            0    12334455442  100  125776642   


Q ss_pred             CCCC-CccChHHHHHHHHHHhHHcCCcEEEecCCCCC-CCChhhh-HHHHHHHHHHHHHHhCCCCcEEEEccC--CHHHH
Q 019093          107 NSQD-GVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDP-IVDIFDR-EKVFIDTILQPLIQRLPQLKVVMEHIT--TMDAV  181 (346)
Q Consensus       107 ~~~~-~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~-~~~~~~~-E~~av~~~l~~~la~~~g~~lhi~HvS--t~~~l  181 (346)
                       .+. ...+. +.+.++++.+++.|+++.+|+++..- +...... ....+.. +  .-....+.+..+.|..  +.+.+
T Consensus       220 -~~~~~~~~~-~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~g~~~~~~-~--~~~g~~~~~~~i~H~~~~~~~~i  294 (492)
T 2paj_A          220 -TTVLYSISP-REMRETAAVARRLGLRMHSHLSETVGYQDSAYSMYGKSPVAF-C--GEHDWLGSDVWYAHLVKVDADEI  294 (492)
T ss_dssp             -TTTTTSSCH-HHHHHHHHHHHHTTCEEEEECC-------------CCCHHHH-H--HHTTCCSTTEEEESCCSCCHHHH
T ss_pred             -ccCCCCCCH-HHHHHHHHHHHHcCCcEEEEeCCChHHHHHHHHHcCCCHHHH-H--HHCCCCCCCcEEEEEecCCHHHH
Confidence             112 12244 78999999999999999999996421 0000000 0001111 1  1112223455455544  45667


Q ss_pred             HHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCC
Q 019093          182 KFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECAC  261 (346)
Q Consensus       182 ~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~  261 (346)
                      +++++.   .+++++||..      .+.   .+   .-.||+|.         .+..|...+ ++|||.++.....  .+
T Consensus       295 ~~l~~~---gv~v~~~p~~------~~~---l~---~~~~p~~~---------~~~~Gv~v~-lgTD~~~~~~~~~--~~  347 (492)
T 2paj_A          295 ALLAQT---GTGVAHCPQS------NGR---LG---SGICPVRE---------MADAGVPVS-IGVDGAASNEAAD--MI  347 (492)
T ss_dssp             HHHHHH---TCEEEECHHH------HHC---C--------CCTT---------HHHHTCCEE-ECCCHHHHCSCCS--HH
T ss_pred             HHHHHc---CCEEEECchh------hcc---cC---CCCCCHHH---------HHHCCCcEE-EeCCCCCCCCCCC--HH
Confidence            777653   3788999942      111   11   13488886         456698888 8999976421100  00


Q ss_pred             C-CCCccchhHHHH--HHHHH--------HHhcCCHHHHHHHHchhhhhhcCCCC-------CCccEEEEe-cce
Q 019093          262 G-CAGIYNAPVALS--LYAKV--------FEEMGALDKLEAFTSFNGPDFYGLPR-------NTSKIKLTK-IPW  317 (346)
Q Consensus       262 ~-~~G~~g~e~~lp--~l~~~--------~~~~~~l~~lv~~~s~nPAki~gl~~-------kdAdlvi~d-~~~  317 (346)
                      . ..++.+++..++  .+|..        .....++++++++.+.|||+++|+++       |+|||+|+| ..+
T Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~aT~~~A~~lgl~~~Gsl~~Gk~ADlvvld~~~~  422 (492)
T 2paj_A          348 SEVHMTWLAQRARLGMLAQPAYRGGSFEGGAGAASIAEVIHWGTAGGARVMGLDEVGKVAVGYAADIAVYRLDDP  422 (492)
T ss_dssp             HHHHHHHHHHHHTC-------------------CCHHHHHHHHTHHHHHHHTCTTSSCCSTTSBCCEEEEECCSG
T ss_pred             HHHHHHHHHhhhhcccccccccccccccCCcCcCCHHHHHHHHHHHHHHHhCCCCccccCCCCccCEEEEeCCCc
Confidence            0 001112222111  01110        11235899999999999999999852       289999999 443

>1o12_A N-acetylglucosamine-6-phosphate deacetylase; structural genomics, TM0814, JCSG, PSI, protein structure initiative; 2.50A {Thermotoga maritima} SCOP: b.92.1.5 c.1.9.10

Probab=99.66  E-value=1.1e-18  Score=168.33  Aligned_cols=261  Identities=13%  Similarity=0.013  Sum_probs=138.8

Q ss_pred             eEEecCccccceecCC-C-ccccccccc-----cCCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEE
Q 019093            2 ELTLTQPDDWHLHLRD-G-DLLKAVVPH-----SVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTL   74 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~-g-~~~ke~~~s-----~sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~   74 (346)
                      ++|+||+||+|||+++ + ..++ ++.+     ..+||||+++|+++.|+.+..+.++.+++.+++... ..-++++.. 
T Consensus        51 ~~v~PGlID~H~H~~~~~~~~~~-~l~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~g-~~i~g~~~~-  127 (376)
T 1o12_A           51 GVLMPGFVDPHIHGVVGADTMNC-DFSEMEEFLYSQGVTTFLATTVSTSLEKMKEILRKARDYILENPS-TSLLGVHLE-  127 (376)
T ss_dssp             SEEEECEEEEEECEETTEETTTT-CHHHHHHHHHTTTEEEEEEECCSCCHHHHHHHHHHHHHHHHHCTT-CSEEEEEEE-
T ss_pred             CEEccCeEEEeecCCCCCCCChh-hHHHHHHHHHhCCcEEEEeccCCCCHHHHHHHHHHHHHHhhccCC-CceEEEEEE-
Confidence            4799999999999987 3 2222 3444     249999999999887655444555555555443111 012333322 


Q ss_pred             EeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHH
Q 019093           75 YLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFI  154 (346)
Q Consensus        75 ~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av  154 (346)
                        .+-...+      ..| .           . ....+... .  .+.++.....-+.+.+++|...            .
T Consensus       128 --g~~~~~~------~~g-~-----------~-~~~~~~~~-~--~~~~~~~~~~~~~~~~~pe~~~------------~  171 (376)
T 1o12_A          128 --GPYISKE------KKG-A-----------H-SEKHIRPP-S--ERELSEIDSPAKMLTFAPEIES------------S  171 (376)
T ss_dssp             --CSSSCGG------GCT-T-----------S-CTTTCCCC-C--HHHHTTCCTTEEEEEECTTSTT------------G
T ss_pred             --cCcCCcc------cCC-C-----------C-CHHHhcCC-C--HHHHHHhhCCeEEEEEccCCcc------------H
Confidence              1111110      012 0           0 00011110 0  1122222111123455655331            1


Q ss_pred             HHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCe-e----EEEccchhhc-------cchhhh-ccCCCCCceEE
Q 019093          155 DTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGF-V----AATVTPQHLV-------LNRNAL-FQGGLRPHNYC  219 (346)
Q Consensus       155 ~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~-v----t~Et~ph~L~-------l~~~~~-~~~~~~~~~k~  219 (346)
                       +++  .+|+..|+++|+.|..  ++++.+++++  |.. +    ++++++|||.       |+.++. ... .....++
T Consensus       172 -~~i--~~A~~~g~~v~igH~~--~~~~~i~~a~~~G~~~itH~~~~~~~~~~~~~g~~~~~l~~~~~~~~~-~~~~~~~  245 (376)
T 1o12_A          172 -ELL--LRLVKRDIVLSAGHSI--ATFEEFMKFYKEGVKRITHFPNGLKPLHHREIGITGAGLLLDDVKLEL-ICDGVHL  245 (376)
T ss_dssp             -GGG--GGGGGGTCEEEECSBC--CCHHHHHHHHTTTCCEESSTTTTBCCCCSSCCHHHHHHHHCTTCEEEE-ECSSSSS
T ss_pred             -HHH--HHHHHCCCEEEeecCc--cCHHHHHHHHHCCCCeEEecccCcCChhhcccchhhhhhcCCcceEEE-eCCCcCc
Confidence             345  6788899999999975  3344444433  433 3    2889999873       211221 000 0012455


Q ss_pred             eCCCCChhhHHHHHHHHHcCC-ccEEeecCCCCCC-----c----------cccccCCCCCCccchhHHHHHHHHHHHh-
Q 019093          220 LPVLKREIHRQAVVSAVTSGS-RKFFLGTDSAPHE-----R----------GRKECACGCAGIYNAPVALSLYAKVFEE-  282 (346)
Q Consensus       220 ~PPLR~~~d~~aL~~al~~G~-Id~~i~SDHaP~~-----~----------~~K~~~~~~~G~~g~e~~lp~l~~~~~~-  282 (346)
                      +|     ++.+.+++..  |. ..+ +.||.....     .          +++.......+++|.++.|+..+..+++ 
T Consensus       246 ~p-----~~~~~~~~~~--g~~~~~-~~sd~~~~~g~~~g~~~~~g~~~~~~~g~~~~~~g~~~g~~~~l~~~l~~~~~~  317 (376)
T 1o12_A          246 SR-----EMVKLVYKVK--KANGIV-LVTDSISAAGLKDGTTTLGDLVVKVKDGVPRLEDGTLAGSTLFFSQAVKNFRKF  317 (376)
T ss_dssp             CH-----HHHHHHHHHH--TGGGEE-EECCBCTTTTSCSCEEESSSSEEEEETTEEECTTSCBCCBCCCHHHHHHHHHHH
T ss_pred             CH-----HHHHHHHhhC--CCCCEE-EecCchhhcCCCCeeEEECCeEEEEeCCeEEeCCCcccccccCHHHHHHHHHHH
Confidence            66     3455555543  22 456 788874211     0          1110001224566666667766543333 


Q ss_pred             -cCCHHHHHHHHchhhhhhcCCCC-C------CccEEEEec
Q 019093          283 -MGALDKLEAFTSFNGPDFYGLPR-N------TSKIKLTKI  315 (346)
Q Consensus       283 -~~~l~~lv~~~s~nPAki~gl~~-k------dAdlvi~d~  315 (346)
                       ..++++++++++.||||+||++. +      +|||+|+|.
T Consensus       318 ~~~~~~~~l~~~T~~~A~~lgl~~~G~i~~G~~ADlv~~d~  358 (376)
T 1o12_A          318 TGCSITELAKVSSYNSCVELGLDDRGRIAEGTRADLVLLDE  358 (376)
T ss_dssp             HCCCHHHHHHHHTHHHHHHTTCTTSSCCSTTSBCCEEEECT
T ss_pred             cCCCHHHHHHHHHHHHHHHhCCCCCccCCCCCcCCEEEECC
Confidence             45899999999999999999953 2      899999994

>3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A

Probab=99.65  E-value=7.9e-16  Score=157.34  Aligned_cols=241  Identities=10%  Similarity=-0.016  Sum_probs=148.6

Q ss_pred             eEEecCccccceecCCCccccccccc--cCCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEE-EEEeCC
Q 019093            2 ELTLTQPDDWHLHLRDGDLLKAVVPH--SVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLM-TLYLTD   78 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~g~~~ke~~~s--~sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~-~~~~~~   78 (346)
                      ++|+||+||.|+|++.+....+++..  ..+|+||+++||++.|.....+.++...+..+. ..  +++.+.+ +.  .+
T Consensus        85 ~~v~PG~ID~H~Hl~~~~~~~~~~~~~al~~GvTtvv~~p~~~~~v~g~~~~~~~l~~a~~-~~--~~v~~~~p~~--~P  159 (608)
T 3nqb_A           85 AYVSPGLIDTHMHIESSMITPAAYAAAVVARGVTTIVWDPHEFGNVHGVDGVRWAAKAIEN-LP--LRAILLAPSC--VP  159 (608)
T ss_dssp             SEEEECEEEEEECGGGGTSCHHHHHHHHHTTTEEEEEECCHHHHHHHTHHHHHHHHHHHTT-CS--SEEEEEECCC--SS
T ss_pred             CEEecCeEecccCcccccCCHHHHHHHHHhCCeEEEEcCCccccccCCHHHHHHHHHHhhh-cC--cEEEEecccc--CC
Confidence            48999999999999763333334432  359999999999988776666666665554433 22  5766554 22  11


Q ss_pred             C----------CCHHHHHHHHHc-CCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChh
Q 019093           79 T----------TSPDEIKLARKT-GVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIF  147 (346)
Q Consensus        79 ~----------~~~~el~~l~~~-G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~  147 (346)
                      .          ...+++.++.+. | +.+++-||.+.    +....+  ..+++.++.+++.|+++.+||+...-     
T Consensus       160 ~~~~~~~~g~~~~~~el~~l~~~~~-v~glgE~~~~~----~v~~~d--~~l~~~l~~A~~~g~pV~~Ha~~~~~-----  227 (608)
T 3nqb_A          160 SAPGLERGGADFDAAILADLLSWPE-IGGIAEIMNMR----GVIERD--PRMSGIVQAGLAAEKLVCGHARGLKN-----  227 (608)
T ss_dssp             SSTTSCCCSCCCCHHHHHHHHTSTT-EEEEEEECCHH----HHHTTC--HHHHHHHHHHHHHTCEEEECCTTCCH-----
T ss_pred             CCCccccCcccCCHHHHHHHHhccC-cceeeEeeccC----CcCCCc--HHHHHHHHHHHHcCCEEEEcCCCCCH-----
Confidence            1          135688888764 6 89999988531    111224  78899999999999999999996431     


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCcEEEEccC--CHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCC
Q 019093          148 DREKVFIDTILQPLIQRLPQLKVVMEHIT--TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKR  225 (346)
Q Consensus       148 ~~E~~av~~~l~~~la~~~g~~lhi~HvS--t~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~  225 (346)
                          ..+..      ....|+..  +|.+  ..++++.+++  |..+..-                +  .         .
T Consensus       228 ----~~L~~------~~~aGv~~--~H~~~~~eea~e~l~~--G~~i~i~----------------g--s---------~  266 (608)
T 3nqb_A          228 ----ADLNA------FMAAGVSS--DHELVSGEDLMAKLRA--GLTIELR----------------G--S---------H  266 (608)
T ss_dssp             ----HHHHH------HHHTTCCE--ECCCCSHHHHHHHHHT--TCEEEEE----------------S--S---------S
T ss_pred             ----HHHHH------HHHcCCCe--eeccCCHHHHHHHHHC--CCEEEEe----------------c--c---------c
Confidence                11211      11246654  7755  3555565552  5444311                0  0         0


Q ss_pred             hhhHHHHHHHHH----cCCccEEeecCCCC-CCccccccCCCCCCccchhHHHHHHHHHHHh-cCCHHHHHHHHchhhhh
Q 019093          226 EIHRQAVVSAVT----SGSRKFFLGTDSAP-HERGRKECACGCAGIYNAPVALSLYAKVFEE-MGALDKLEAFTSFNGPD  299 (346)
Q Consensus       226 ~~d~~aL~~al~----~G~Id~~i~SDHaP-~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~-~~~l~~lv~~~s~nPAk  299 (346)
                      ..+.++|.+++.    .|.--+ ++||..+ ...-.+       |      .++..+....+ ..++++++++.+.|||+
T Consensus       267 ~~~~~~l~~~i~~~~~~g~~v~-lgTD~~~p~~~~~~-------g------~l~~~v~~~~~~Gls~~eal~~aT~n~A~  332 (608)
T 3nqb_A          267 DHLLPEFVAALNTLGHLPQTVT-LCTDDVFPDDLLQG-------G------GLDDVVRRLVRYGLKPEWALRAATLNAAQ  332 (608)
T ss_dssp             GGGHHHHHHHHHHHTSCCTTEE-EECBSCCHHHHHHT-------C------SHHHHHHHHHHTTCCHHHHHHHHTHHHHH
T ss_pred             cccHHHHHHHHHhHhhcCceEE-EecCCCCCcchhhh-------c------chHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence            123345666655    565555 8999632 100000       1      13333332223 35899999999999999


Q ss_pred             hcCCC-CC------CccEEEEe
Q 019093          300 FYGLP-RN------TSKIKLTK  314 (346)
Q Consensus       300 i~gl~-~k------dAdlvi~d  314 (346)
                      +||++ .+      .|||+++|
T Consensus       333 ~lgl~~~G~i~~G~~ADlvv~d  354 (608)
T 3nqb_A          333 RLGRSDLGLIAAGRRADIVVFE  354 (608)
T ss_dssp             HHTCTTSSCCSTTSBCCEEEES
T ss_pred             HcCCCCCcCcCCCCCccEEEEC
Confidence            99984 22      89999998

>2imr_A Hypothetical protein DR_0824; zinc, NYSGXRC, PSI2, structural genomics, protein structure initiative; 1.78A {Deinococcus radiodurans} SCOP: b.92.1.11 c.1.9.16

Probab=99.63  E-value=7.9e-16  Score=150.01  Aligned_cols=256  Identities=11%  Similarity=-0.048  Sum_probs=136.2

Q ss_pred             eEEecCccccceecCCCc------c---ccc--------cc-----c-----ccCCceeEEEeCCCCCCCCCcHHHHHHH
Q 019093            2 ELTLTQPDDWHLHLRDGD------L---LKA--------VV-----P-----HSVSHYGRAIVMPNLKPPITTTAAAVAY   54 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~g~------~---~ke--------~~-----~-----s~sGGvTtvv~mPnt~p~~~~~~~~~~~   54 (346)
                      ++|+||+||+|+|++.+.      .   ..+        .+     .     ...+||||+++|+++      .+.++. 
T Consensus        89 ~~v~PGlID~H~H~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~------~~~~~~-  161 (420)
T 2imr_A           89 AVIAPPPVNAHTHLDMSAYEFQALPYFQWIPEVVIRGRHLRGVAAAQAGADTLTRLGAGGVGDIVWA------PEVMDA-  161 (420)
T ss_dssp             SEESSCCCEEEEESSCCHHHHHHCHHHHTSHHHHHHHTTCCHHHHHHHHHHHHHHTTCCCEEEEECS------HHHHHH-
T ss_pred             eEECCCCEecCcCcchhhhhhccCCHHHHHHHhhhhhhhccCHHHHHHHHHHHHhcCcEEEEEccCC------HHHHHH-
Confidence            479999999999997520      0   001        11     1     123999999999853      233321 


Q ss_pred             HHHHHhhCCCCccEEEEEEEE-eCCCC---CHHHHHHHHHc----CCeeEEEEeecCCccCCCCCccChHHHHHHHHHHh
Q 019093           55 RESILKALPASSNFTPLMTLY-LTDTT---SPDEIKLARKT----GVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEM  126 (346)
Q Consensus        55 ~~~~~~~~~~~vd~~~~~~~~-~~~~~---~~~el~~l~~~----G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~  126 (346)
                        .+.+ .  .++..+...+. ..+..   ..+++.++.+.    + ...+|++++..    .....+. +.+.++++.+
T Consensus       162 --~~~~-~--g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~----~~~~~~~-~~l~~~~~~a  230 (420)
T 2imr_A          162 --LLAR-E--DLSGTLYFEVLNPFPDKADEVFAAARTHLERWRRLE-RPGLRLGLSPH----TPFTVSH-RLMRLLSDYA  230 (420)
T ss_dssp             --HHTC-T--TCCEEEEEEECBCCGGGHHHHHHHHHHHHHHHHTTC-BTTEEEEEEEC----CSSSBCH-HHHHHHHHHH
T ss_pred             --HHHh-c--CcEEEEEeeecCCCchhhHHHHHHHHHHHHHHhccc-CCceEEEecCC----cCCCcCH-HHHHHHHHHH
Confidence              1222 1  14443322321 11110   11233333321    1 12357766421    1112244 7899999999


Q ss_pred             HHcCCcEEEecCCCC-CCCChhh------------------h---------HHHHHHHHHHHHHHhCCCCcEEEEccCCH
Q 019093          127 VEQNMPLLVHGEVTD-PIVDIFD------------------R---------EKVFIDTILQPLIQRLPQLKVVMEHITTM  178 (346)
Q Consensus       127 ~~~g~~v~vHaE~~~-~~~~~~~------------------~---------E~~av~~~l~~~la~~~g~~lhi~HvSt~  178 (346)
                      ++.|+++.+|+.... .+.....                  .         ....+....+.-+.....+..|.+|++ .
T Consensus       231 ~~~g~~v~~H~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~i~H~~~l~-~  309 (420)
T 2imr_A          231 AGEGLPLQIHVAEHPTELEMFRTGGGPLWDNRMPALYPHTLAEVIGREPGPDLTPVRYLDELGVLAARPTLVHMVNVT-P  309 (420)
T ss_dssp             HHHTCCBEEEESCSHHHHHHHHHSCSTTGGGSCGGGSCSSHHHHHTSCCCTTCCHHHHHHHHTCGGGCCEEEECCSCC-H
T ss_pred             HHCCCcEEEEeCCCHHHHHHHHHhhccccccccccchhhhhhhhccccccCCCCHHHHHHHcCCCCCCeEEEecCcCC-H
Confidence            999999999996331 1000000                  0         000011111000111123446777775 6


Q ss_pred             HHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccc
Q 019093          179 DAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKE  258 (346)
Q Consensus       179 ~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~  258 (346)
                      +.++++++. |  +++++||++...    +   +  .   .+||+|         +++++|.+++ ++|||.+.....  
T Consensus       310 ~~i~~l~~~-g--~~~~~~p~~~~~----~---~--~---~~~~l~---------~~~~~Gv~~~-lgtD~~~~~~~~--  362 (420)
T 2imr_A          310 DDIARVARA-G--CAVVTCPRSNHH----L---E--C---GTFDWP---------AFAAAGVEVA-LGTDSVASGETL--  362 (420)
T ss_dssp             HHHHHHHHH-T--CCEEECHHHHHH----T---T--C---CCCCHH---------HHHHTTCCEE-ECCCCHHHHSCS--
T ss_pred             HHHHHHHHc-C--CeEEECHHHHHH----h---c--c---CCCCHH---------HHHHCCCeEE-EECCCCccCCCC--
Confidence            788888864 3  578999986321    1   1  1   257765         5778899999 999996532100  


Q ss_pred             cCCCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHchhhhhhcCCC-C-C------CccEEEEe
Q 019093          259 CACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLP-R-N------TSKIKLTK  314 (346)
Q Consensus       259 ~~~~~~G~~g~e~~lp~l~~~~~~~~~l~~lv~~~s~nPAki~gl~-~-k------dAdlvi~d  314 (346)
                              .-.+. +..+.+. ....++++++++++.||||+||++ + +      +||| |||
T Consensus       363 --------~~~~~-~~~~~~~-~~~ls~~~al~~aT~n~A~~lgl~~~~GsL~~Gk~ADl-vvd  415 (420)
T 2imr_A          363 --------NVREE-VTFARQL-YPGLDPRVLVRAAVKGGQRVVGGRTPFLRRGETWQEGF-RWE  415 (420)
T ss_dssp             --------CTHHH-HHHHHHH-CTTSCHHHHHHHHHHHHHHHHC--CCCCSTTSBCCGGG-BGG
T ss_pred             --------CHHHH-HHHHHhc-CCCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCccCE-EEE
Confidence                    00111 1111111 124589999999999999999994 2 2      8999 676

>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*

Probab=99.52  E-value=5.8e-14  Score=136.69  Aligned_cols=188  Identities=12%  Similarity=0.189  Sum_probs=111.4

Q ss_pred             HHHHHHcCCeeEEEEeecCCccCC----CCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHH
Q 019093           85 IKLARKTGVVFAVKLYPAGATTNS----QDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQP  160 (346)
Q Consensus        85 l~~l~~~G~v~~~Kif~~~~~~~~----~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~  160 (346)
                      +.++.+.| +..+|+|+.+.....    +....+. +.+.++++.+++.|.++.+|+...           .++.+.+  
T Consensus       181 v~~~~~~g-~~~ik~~~~G~~~~~~~p~~~~~~~~-e~l~~~~~~A~~~g~~v~~H~~~~-----------~~i~~al--  245 (426)
T 2r8c_A          181 VREELQMG-ADQIKIMASGGVASPTDPVGVFGYSE-DEIRAIVAEAQGRGTYVLAHAYTP-----------AAIARAV--  245 (426)
T ss_dssp             HHHHHHHT-CSSEEEECBCCSSSSSCCSSCBCSCH-HHHHHHHHHHHHTTCCEEEEECSH-----------HHHHHHH--
T ss_pred             HHHHHHcC-CCEEEEEecCCCCCCCCCcccccCCH-HHHHHHHHHHHHcCCEEEEEeCCh-----------HHHHHHH--
Confidence            45556678 688999975321110    0111234 789999999999999999999843           1233333  


Q ss_pred             HHHhCCCCcEEEEccC--CHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCC--hhhHHHHHHHH
Q 019093          161 LIQRLPQLKVVMEHIT--TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKR--EIHRQAVVSAV  236 (346)
Q Consensus       161 ~la~~~g~~lhi~HvS--t~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~--~~d~~aL~~al  236 (346)
                      .    .|.. .|.|..  +.+.++.+++. |..+.....++..++...+..  +..+.  .+-.++.  ......+.+.+
T Consensus       246 ~----~G~~-~i~H~~~~~~~~~~~~~~~-gv~~~pt~~~~~~~~~~~~~~--~~~p~--~~~~~~~~~~~~~~~~~~~~  315 (426)
T 2r8c_A          246 R----CGVR-TIEHGNLIDDETARLVAEH-GAYVVPTLVTYDALASEGEKY--GLPPE--SIAKIADVHGAGLHSIEIMK  315 (426)
T ss_dssp             H----TTCS-EEEECTTCCHHHHHHHHHT-TCEEECCTHHHHHHHHHTTTT--TCCHH--HHTTSTTTGGGHHHHHHHHH
T ss_pred             H----cCCC-EEecCCcCCHHHHHHHHHc-CCeEeechHHHHHHhhhcccc--CCCHH--HHHHHHHHHHHHHHHHHHHH
Confidence            1    3554 477776  56777777654 455544444554444322210  00000  0111222  12344566777


Q ss_pred             HcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHchhhhhhcCCCC--C------Cc
Q 019093          237 TSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLPR--N------TS  308 (346)
Q Consensus       237 ~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~~~~l~~lv~~~s~nPAki~gl~~--k------dA  308 (346)
                      +.|..-. ++||+.+...          +....|.      ....+..++++++++.+.|||+++|++.  +      .|
T Consensus       316 ~~Gv~v~-lgTD~~~~~~----------~~~~~e~------~~~~~~l~~~eal~~aT~~~A~~lg~~~~~G~i~~G~~A  378 (426)
T 2r8c_A          316 RAGVKMG-FGTDLLGEAQ----------RLQSDEF------RILAEVLSPAEVIASATIVSAEVLGMQDKLGRIVPGAHA  378 (426)
T ss_dssp             HTTCEEC-CCCCCCGGGG----------GGTTHHH------HHHTTTSCHHHHHHHTTHHHHHHTTCTTTSSSCCTTSBC
T ss_pred             HcCCeEE-EecCCCCCCC----------cchHHHH------HHHHhcCCHHHHHHHHHHHHHHHhCCCCCCccCCCCCcC
Confidence            8888877 8999853210          1111122      1223447899999999999999999843  2      89


Q ss_pred             cEEEEe
Q 019093          309 KIKLTK  314 (346)
Q Consensus       309 dlvi~d  314 (346)
                      ||+|+|
T Consensus       379 Dlvvld  384 (426)
T 2r8c_A          379 DVLVVD  384 (426)
T ss_dssp             CEEEES
T ss_pred             CEEEEC
Confidence            999998

>2qt3_A N-isopropylammelide isopropyl amidohydrolase; N-isopropylammelide isopropylaminohydrolase ATZC, structural genomics, NYSGXRC, target 9364B; 2.24A {Pseudomonas SP}

Probab=99.52  E-value=2.3e-13  Score=131.08  Aligned_cols=154  Identities=10%  Similarity=0.011  Sum_probs=92.3

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCC--CcEEEEccCCH---------HHHHHHH
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQ--LKVVMEHITTM---------DAVKFVE  185 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g--~~lhi~HvSt~---------~~l~~i~  185 (346)
                      +.+.++++.+++.|+++.+|+....      .....++...+  ..++..|  .++.+.|....         +.++.++
T Consensus       198 ~~l~~~~~~A~~~g~~v~~H~~~~~------~~~~~~~~~~~--~~~~~~g~~~~~~i~H~~~~~~~~~~~~~~~~~~l~  269 (403)
T 2qt3_A          198 GSLDLCFKLAKEYDVDIDYHIHDIG------TVGVYSINRLA--QKTIENGYKGRVTTSHAWCFADAPSEWLDEAIPLYK  269 (403)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEECCCH------HHHHHHHHHHH--HHHHHTTCTTSEEEEECTHHHHSCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCeEEEeCCcc------cchhHHHHHHH--HHHHHcCCCCCeEEEehhhhccCChhhHHHHHHHHH
Confidence            6788999999999999999997542      00112233333  2333334  47899998753         4566665


Q ss_pred             ccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCC
Q 019093          186 SCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAG  265 (346)
Q Consensus       186 ~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G  265 (346)
                      +.   .+.+..||.                       ++..  ...+++.+..|...+ ++||+..+.       +...|
T Consensus       270 ~~---g~~v~~~p~-----------------------~~~~--~~~~~~~~~~Gv~v~-lgtD~~~~~-------~~~~g  313 (403)
T 2qt3_A          270 DS---GMKFVTCFS-----------------------STPP--TMPVIKLLEAGINLG-CASDNIRDF-------WVPFG  313 (403)
T ss_dssp             HH---TCEEEEETT-----------------------TCCT--TCCHHHHHHTTCEEE-EECCSCSSS-------SCSCC
T ss_pred             Hc---CCEEEECCC-----------------------CCCC--CCCHHHHHHcCCcEE-EeCCCCCCC-------CCCCC
Confidence            43   244555662                       2211  123556777898888 999995321       11123


Q ss_pred             ccch-hHH-HHHHHHHHHhcCCHHHHHHHHchhhhhhcCCCC-------CCccEEEEe
Q 019093          266 IYNA-PVA-LSLYAKVFEEMGALDKLEAFTSFNGPDFYGLPR-------NTSKIKLTK  314 (346)
Q Consensus       266 ~~g~-e~~-lp~l~~~~~~~~~l~~lv~~~s~nPAki~gl~~-------kdAdlvi~d  314 (346)
                      ...+ +.+ +......+....+++++++.++.|||++||++.       |.|||+|+|
T Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~T~~~A~~lg~~~~g~i~~G~~ADlvv~d  371 (403)
T 2qt3_A          314 NGDMVQGALIETQRLELKTNRDLGLIWKMITSEGARVLGIEKNYGIEVGKKADLVVLN  371 (403)
T ss_dssp             CCCHHHHHHHHHHHTTCCSHHHHHHHHHHTTHHHHHHHTCGGGCSSSTTSBCCEEEES
T ss_pred             CCCHHHHHHHHHHHhCcCCccCHHHHHHHHHHHHHHhcCCCcccCCCCCCcCCEEEEc
Confidence            3222 222 111111111113678999999999999999842       289999999

>2q09_A Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dioxo-imidazo 4YL)-propionic acid, PSI-2 community, structural genomics, structure initiative; HET: DI6; 1.97A {Unidentified} SCOP: b.92.1.10 c.1.9.17 PDB: 2oof_A*

Probab=99.51  E-value=1.5e-12  Score=126.29  Aligned_cols=146  Identities=12%  Similarity=-0.030  Sum_probs=94.9

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCC--cEEEEccCCHHHHHHHHccCCCeeEE
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQL--KVVMEHITTMDAVKFVESCKEGFVAA  194 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~--~lhi~HvSt~~~l~~i~~akg~~vt~  194 (346)
                      ..+.++++.+++.|+++.+|+.....   .   +  .+....      ..|.  -.|..|+ +.+.++.+++.   .+++
T Consensus       223 ~~~~~~~~~a~~~g~~v~~H~~~~~~---~---~--~~~~~~------~~g~~~~~H~~~~-~~~~~~~~~~~---g~~~  284 (416)
T 2q09_A          223 AQTEQVYLAADQYGLAVKGHMDQLSN---L---G--GSTLAA------NFGALSVDHLEYL-DPEGIQALAHR---GVVA  284 (416)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEESSSCC---C---S--HHHHHH------HTTCSEEEECTTC-CHHHHHHHHHH---TCEE
T ss_pred             HHHHHHHHHHHHCCCcEEEEECCCCc---h---H--HHHHHH------HcCCCEEeecccC-CHHHHHHHHHc---CCeE
Confidence            78999999999999999999975421   0   0  121111      1233  2355555 56777777764   3678


Q ss_pred             EccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHH
Q 019093          195 TVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALS  274 (346)
Q Consensus       195 Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp  274 (346)
                      .+||.+.+..     + +     ...||         ++..++.|...+ ++|||.|++..          ..   .++.
T Consensus       285 ~~~p~~~~~~-----~-~-----~~~~~---------~~~~~~~Gv~~~-~gtD~~~~~~~----------~~---~~~~  330 (416)
T 2q09_A          285 TLLPTAFYFL-----K-E-----TKLPP---------VVALRKAGVPMA-VSSDINPGTAP----------IV---SLRM  330 (416)
T ss_dssp             EECHHHHHHT-----T-C-----CCCCC---------HHHHHHTTCCEE-ECCCCBTTTBC----------CC---CHHH
T ss_pred             EEcCccHHhh-----c-c-----ccccC---------HHHHHHCCCeEE-EecCCCCccCC----------CC---CHHH
Confidence            8899765421     0 1     11244         446778899999 89999765310          01   1233


Q ss_pred             HHHHHH-HhcCCHHHHHHHHchhhhhhcCCCC--------CCccEEEEe
Q 019093          275 LYAKVF-EEMGALDKLEAFTSFNGPDFYGLPR--------NTSKIKLTK  314 (346)
Q Consensus       275 ~l~~~~-~~~~~l~~lv~~~s~nPAki~gl~~--------kdAdlvi~d  314 (346)
                      .+.... ..+.++++++++++.|||+++|++.        |+|||+|+|
T Consensus       331 ~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~l~~G~~ADlvvld  379 (416)
T 2q09_A          331 AMNMACTLFGLTPVEAMAGVTRHAARALGEQEQLGQLRVGMLADFLVWN  379 (416)
T ss_dssp             HHHHHHHHHCCCHHHHHHHTTHHHHHHTTCTTTSSSCCTTSBCCEEEES
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCccceecCCCCCccEEEEC
Confidence            333222 3457999999999999999999842        289999999

>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*

Probab=99.50  E-value=8.8e-14  Score=134.70  Aligned_cols=185  Identities=11%  Similarity=0.112  Sum_probs=108.7

Q ss_pred             HHHHHHHcCCeeEEEEeecCCccCC----CCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHH
Q 019093           84 EIKLARKTGVVFAVKLYPAGATTNS----QDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQ  159 (346)
Q Consensus        84 el~~l~~~G~v~~~Kif~~~~~~~~----~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~  159 (346)
                      .+.++.+.| +..+|+|+.+.....    +....+. +.+.++++.+++.|+++.+|+...           .++...+ 
T Consensus       177 ~v~~~~~~g-~~~ik~~~~g~~~~~~~p~~~~~~~~-e~l~~~~~~A~~~g~~v~~H~~~~-----------~~i~~~l-  242 (423)
T 3feq_A          177 AVREEIQKG-ATQIKIMASGGVASPTDPIANTQYSE-DEIRAIVDEAEAANTYVMAHAYTG-----------RAIARAV-  242 (423)
T ss_dssp             HHHHHHHTT-CSSEEEECBCCSSSSSCCTTSBCSCH-HHHHHHHHHHHHTTCCEEEEEEEH-----------HHHHHHH-
T ss_pred             HHHHHHHcC-CCEEEEeccCCcCCCCCCcccccCCH-HHHHHHHHHHHHCCCeEEEEeCCh-----------HHHHHHH-
Confidence            345566678 689999975321110    0111234 789999999999999999999842           1343444 


Q ss_pred             HHHHhCCCCcEEEEccC--CHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCCh------hhHHH
Q 019093          160 PLIQRLPQLKVVMEHIT--TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKRE------IHRQA  231 (346)
Q Consensus       160 ~~la~~~g~~lhi~HvS--t~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~------~d~~a  231 (346)
                       .    .|.. .|.|..  +.+.++.+++. |..+.....++..++...+.        ..++|..+.+      .....
T Consensus       243 -~----~g~~-~i~H~~~~~~~~~~~l~~~-gv~~~pt~~~~~~~~~~~~~--------~~~~p~~~~~~~~~~~~~~~~  307 (423)
T 3feq_A          243 -R----CGVR-TIEHGNLVDEAAAKLMHEH-GAFVVPTLVTYDALAKHGAE--------FGMPPESVAKVASVQQKGRES  307 (423)
T ss_dssp             -H----HTCC-EEEEEEECCHHHHHHHHHH-TCEEECCTHHHHHHHHHTGG--------GTCCTTTSSTHHHHHHHHHHH
T ss_pred             -H----cCCC-EEeccCcCCHHHHHHHHHC-CCccccchHHHHHHHhcccc--------cCCCHHHHHHHHHHHHHHHHH
Confidence             2    1443 355544  57777777754 34443333344333332221        1122322221      12334


Q ss_pred             HHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHchhhhhhcCCC-C-----
Q 019093          232 VVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLP-R-----  305 (346)
Q Consensus       232 L~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~~~~l~~lv~~~s~nPAki~gl~-~-----  305 (346)
                      +...++.|..-+ ++||+.+..          .|....|..      ...+..++++++++++.|||+++|++ +     
T Consensus       308 ~~~l~~~Gv~v~-~gTD~~~~~----------~~~~~~e~~------~~~~~ls~~eal~~aT~~~A~~lg~~~~~G~i~  370 (423)
T 3feq_A          308 LEIYANAGVKMG-FGSDLLGEM----------HAFQSGEFR------IRAEVLGNLEALRSATTVAAEIVNMQGQLGVIA  370 (423)
T ss_dssp             HHHHHHHTCCBC-CCCCCCGGG----------GGGTTHHHH------HHHTTSCHHHHHHTTTHHHHHHTTCBTTBSSCC
T ss_pred             HHHHHHCCCEEE-ECCCCCCCC----------CcchHHHHH------HHHhhCCHHHHHHHHHHHHHHHhCCCCCceeEC
Confidence            556777888887 899985211          011111221      12344789999999999999999984 2     


Q ss_pred             --CCccEEEEe
Q 019093          306 --NTSKIKLTK  314 (346)
Q Consensus       306 --kdAdlvi~d  314 (346)
                        |.|||+|+|
T Consensus       371 ~G~~ADlvv~d  381 (423)
T 3feq_A          371 VGAIADLVVLD  381 (423)
T ss_dssp             TTSBCCEEEES
T ss_pred             CCCcCCEEEEC
Confidence              289999998

>2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure initiative, PSI-2, NYSGXRC, structural genomics; 2.33A {Alteromonas macleodii} SCOP: b.92.1.9 c.1.9.18

Probab=99.50  E-value=3.7e-13  Score=130.55  Aligned_cols=182  Identities=14%  Similarity=0.069  Sum_probs=110.7

Q ss_pred             HcCCeeEEEEeecCCcc-CC---CCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhC
Q 019093           90 KTGVVFAVKLYPAGATT-NS---QDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRL  165 (346)
Q Consensus        90 ~~G~v~~~Kif~~~~~~-~~---~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~  165 (346)
                      +.| ...+|+|+.+... ..   +....+. +.+.++++.+++.|+++.+|++..           ..+...+  .    
T Consensus       187 ~~g-~~~ik~~~~g~~~~~~~~~g~~~~~~-~~l~~~~~~A~~~g~~v~~H~~~~-----------~~i~~~~--~----  247 (418)
T 2qs8_A          187 KDG-ADGIKITVTGGVLSVAKSGQNPQFTQ-EEVDAVVSAAKDYGMWVAVHAHGA-----------EGMKRAI--K----  247 (418)
T ss_dssp             HHT-CSEEEEECBCCSSSSSSCSSCBCSCH-HHHHHHHHHHHHTTCEEEEEECSH-----------HHHHHHH--H----
T ss_pred             HcC-CCEEEEEecCCCCCCCCCCCcccCCH-HHHHHHHHHHHHcCCEEEEEECCH-----------HHHHHHH--H----
Confidence            356 5689999743110 00   1112244 789999999999999999999853           1233333  1    


Q ss_pred             CCCcEEEEccC--CHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCC-h-------hhHHHHHHH
Q 019093          166 PQLKVVMEHIT--TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKR-E-------IHRQAVVSA  235 (346)
Q Consensus       166 ~g~~lhi~HvS--t~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~-~-------~d~~aL~~a  235 (346)
                      .|.. .|.|..  +.+.++++++. |.  .  +||.++.++... .. +   ..+..||.+. +       .....+++.
T Consensus       248 ~g~~-~i~H~~~~~~~~i~~l~~~-gv--~--v~p~~~~~~~~~-~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (418)
T 2qs8_A          248 AGVD-SIEHGTFMDLEAMDLMIEN-GT--Y--YVPTISAGEFVA-EK-S---KIDNFFPEIVRPKAASVGPQISDTFRKA  316 (418)
T ss_dssp             HTCS-EEEECTTCCHHHHHHHHHH-TC--E--EECCHHHHHHHH-HH-T---TSTTSSCTTTHHHHHHHHHHHHHHHHHH
T ss_pred             cCCC-EEEECCCCCHHHHHHHHHC-CC--E--EeeeechHHHhh-hh-c---cccCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            1332 356655  57888888763 44  2  467765543211 00 0   1123466653 2       234578889


Q ss_pred             HHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHchhhhhhcCCC-C-------CC
Q 019093          236 VTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLP-R-------NT  307 (346)
Q Consensus       236 l~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~~~~l~~lv~~~s~nPAki~gl~-~-------kd  307 (346)
                      ++.|...+ ++||+ |...         .+-...|  +.++   .....++++++++.+.|||+++|++ +       |+
T Consensus       317 ~~~Gv~v~-~gTD~-~~~~---------~~~~~~e--~~~~---~~~gls~~eal~~~T~n~A~~lg~~~~~G~l~~G~~  380 (418)
T 2qs8_A          317 YEKGVKIA-FGTDA-GVQK---------HGTNWKE--FVYM---VENGMPAMKAIQSATMETAKLLRIEDKLGSIESGKL  380 (418)
T ss_dssp             HHHTCCBC-CCCCB-TTBC---------TTCTTHH--HHHH---HHTTCCHHHHHHHTTHHHHHHTTCTTTSSSCCTTSB
T ss_pred             HHCCCEEE-EeCCC-CcCC---------cchHHHH--HHHH---HHcCCCHHHHHHHHHHHHHHHhCCCCCCcccCCCCc
Confidence            99999888 89998 4311         0111112  2222   1234689999999999999999994 3       28


Q ss_pred             ccEEEEe-cce
Q 019093          308 SKIKLTK-IPW  317 (346)
Q Consensus       308 Adlvi~d-~~~  317 (346)
                      |||+|+| .++
T Consensus       381 ADlvvld~~~~  391 (418)
T 2qs8_A          381 ADLIAVKGNPI  391 (418)
T ss_dssp             CCEEEESSCTT
T ss_pred             cCEEEECCChh
Confidence            9999999 443

>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A*

Probab=99.47  E-value=7.1e-12  Score=122.45  Aligned_cols=157  Identities=14%  Similarity=0.091  Sum_probs=96.6

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHH-HHH----HHHH-HHHhCCCCcEEEEccC--CHHHHHHHHccC
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVF-IDT----ILQP-LIQRLPQLKVVMEHIT--TMDAVKFVESCK  188 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~a-v~~----~l~~-~la~~~g~~lhi~HvS--t~~~l~~i~~ak  188 (346)
                      +.+.++++.+++.|+++.+|+....       .|... +.+    .++. .-....+.+..+.|..  +.+.++.+++. 
T Consensus       200 ~~l~~~~~~A~~~g~~v~iH~~~~~-------~~~~~~~~~~g~~~i~~~~~~g~~~~~~~~~H~~~~~~~~~~~~~~~-  271 (447)
T 4f0r_A          200 DTFRKVVTLAEQEDMLIHCHIHETA-------DEVNNSVKEHGQRPLARLQRLGLLSPRLVAAHMVHLNDAEVELAARH-  271 (447)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEESCCH-------HHHHHHHHHHSSCHHHHHHHHTCCSTTEEEEECCSCCHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHcCCeEEEEeCCCH-------HHHHHHHHHcCCCHHHHHHHcCCCCCCcEEEeccCCCHHHHHHHHHc-
Confidence            7899999999999999999997541       11111 100    0100 1123345677777776  56777777654 


Q ss_pred             CCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccc
Q 019093          189 EGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYN  268 (346)
Q Consensus       189 g~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g  268 (346)
                        .+.+..||..-+      .. +.+     .+|         +.+.+..|...+ ++||+.+...         .+-+-
T Consensus       272 --g~~~~~~p~~~~------~~-~~~-----~~~---------~~~~~~~Gv~v~-lgTD~~~~~~---------~~~~~  318 (447)
T 4f0r_A          272 --GLSTAHNPASNM------KL-ASG-----ISP---------VSKLMDAGVAVG-IGTDGAASNN---------KLDML  318 (447)
T ss_dssp             --TCEEEECHHHHH------HT-TCC-----CCC---------HHHHHHTTCEEE-ECCCCGGGTC---------CCCHH
T ss_pred             --CCEEEECchhhh------hc-CCC-----CCc---------HHHHHHCCCcEE-EeCCCCcCCC---------CCCHH
Confidence              456778886321      11 101     122         556778898888 8999965311         01111


Q ss_pred             hhHHHHHHHHHHH----hcCCHHHHHHHHchhhhhhcCCCC--C------CccEEEEe
Q 019093          269 APVALSLYAKVFE----EMGALDKLEAFTSFNGPDFYGLPR--N------TSKIKLTK  314 (346)
Q Consensus       269 ~e~~lp~l~~~~~----~~~~l~~lv~~~s~nPAki~gl~~--k------dAdlvi~d  314 (346)
                      -+..+..++....    ...++++++++++.|||++||++.  +      +|||+|+|
T Consensus       319 ~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~n~A~~lg~~~~~G~l~~G~~ADlvv~d  376 (447)
T 4f0r_A          319 AETRLAALLAKVGTLDPTSVPAAAAIRMATLNGARALGIADKVGSVKVGKQADLIALD  376 (447)
T ss_dssp             HHHHHHHHHHHHHHTCTTSSCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEEE
T ss_pred             HHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHhCCCCCccccCCCCcCCEEEEe
Confidence            2333443332211    135899999999999999999943  2      89999999

>3ls9_A Triazine hydrolase; atrazine chlorohydrolase TRZN; 1.40A {Arthrobacter aurescens} PDB: 3lsc_A* 3lsb_A*

Probab=99.44  E-value=7.4e-12  Score=122.39  Aligned_cols=156  Identities=12%  Similarity=0.001  Sum_probs=95.5

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHH----HHHH-HHHhCCCCcEEEEccC--CHHHHHHHHccCC
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDT----ILQP-LIQRLPQLKVVMEHIT--TMDAVKFVESCKE  189 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~----~l~~-~la~~~g~~lhi~HvS--t~~~l~~i~~akg  189 (346)
                      +.+.++++.+++.|+++.+|+.....       |.....+    .++. .-....+.+..+.|..  +.+.++.+++.  
T Consensus       219 ~~l~~~~~~a~~~g~~v~~H~~e~~~-------~~~~~~~~~~~~~~~~~~~g~~~~~~~i~H~~~~~~~~~~~l~~~--  289 (456)
T 3ls9_A          219 ELFEAFAQMAADYDVRLHTHFYEPLD-------AGMSDHLYGMTPWRFLEKHGWASDRVWLAHAVVPPREEIPEFADA--  289 (456)
T ss_dssp             HHHHHHHHHHHHHTCEEEEEECCTTH-------HHHHHHHHSSCHHHHHHHTTCSSTTEEEEECCSCCGGGHHHHHHH--
T ss_pred             HHHHHHHHHHHHCCCCEEEEeCCCch-------HHHHHHHhCCCHHHHHHHcCCCCCCcEEEeccCCCHHHHHHHHHc--
Confidence            78999999999999999999975431       1111110    0100 1122345566677765  56778877764  


Q ss_pred             CeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccch
Q 019093          190 GFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNA  269 (346)
Q Consensus       190 ~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~  269 (346)
                       .+.+.+||.+-...       +.+     .+|         +.+.+..|...+ ++||+.+...          +..-+
T Consensus       290 -g~~~~~~p~s~~~l-------~~~-----~~~---------~~~~~~~Gv~v~-lgtD~~~~~~----------~~~~~  336 (456)
T 3ls9_A          290 -GVAIAHLIAPDLRM-------GWG-----LAP---------IREYLDAGITVG-FGTTGSASND----------GGNLL  336 (456)
T ss_dssp             -TCEEEECHHHHHHT-------TCC-----CCC---------HHHHHHTTCEEE-ECCCCTTSSC----------CCCHH
T ss_pred             -CCEEEEChhHHhhc-------CCC-----cch---------HHHHHHCCCcEE-EECCCCccCC----------CCCHH
Confidence             46777899643211       111     123         345567799888 9999966321          11111


Q ss_pred             -hHHHHHHHHHHH--h----cCCHHHHHHHHchhhhhhcCCC-CC------CccEEEEe
Q 019093          270 -PVALSLYAKVFE--E----MGALDKLEAFTSFNGPDFYGLP-RN------TSKIKLTK  314 (346)
Q Consensus       270 -e~~lp~l~~~~~--~----~~~l~~lv~~~s~nPAki~gl~-~k------dAdlvi~d  314 (346)
                       |..+.+.+....  .    ..++++++++.+.|||+++|++ .+      .|||+|+|
T Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~T~~~A~~lg~~~~G~l~~G~~ADlvv~d  395 (456)
T 3ls9_A          337 GDLRLAALAHRPADPNEPEKWLSARELLRMATRGSAECLGRPDLGVLEEGRAADIACWR  395 (456)
T ss_dssp             HHHHHHHHHTGGGSTTCGGGSCCHHHHHHHTTHHHHHHTTCTTSSCCSTTSBCCEEEEE
T ss_pred             HHHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHhCCCCCCccCCCCccCEEEEe
Confidence             222222221111  1    4589999999999999999985 22      89999999

>3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica}

Probab=99.42  E-value=5.2e-11  Score=117.03  Aligned_cols=156  Identities=13%  Similarity=0.098  Sum_probs=95.6

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHH----HHHHHH--HhCCCCcEEEEccC--CHHHHHHHHccC
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDT----ILQPLI--QRLPQLKVVMEHIT--TMDAVKFVESCK  188 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~----~l~~~l--a~~~g~~lhi~HvS--t~~~l~~i~~ak  188 (346)
                      +.+.++++.+++.|+++.+|+....     ...+. ++.+    .++ .+  ....+.+..+.|..  +.+.++.+++. 
T Consensus       227 ~~l~~~~~~A~~~g~~v~~H~~e~~-----~~~~~-~~~~~g~~~i~-~~~~~g~l~~~~~~~H~~~~~~~~~~~l~~~-  298 (468)
T 3lnp_A          227 EPLKEITMLSDQLDMPVQIHLHETD-----FEVSE-SLETFNKRPTQ-RLADIGFLNERVSCVHMTQVDDGDIKILQKT-  298 (468)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEESCSH-----HHHHH-HHHHHSSCHHH-HHHHTTCCSTTEEEEECCSCCHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHcCCcEEEEeCCCH-----HHHHH-HHHHhCCCHHH-HHHHcCCCCCCeEEEeccCCCHHHHHHHHhc-
Confidence            7899999999999999999997531     00110 0100    010 11  22345667777766  56777777764 


Q ss_pred             CCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccc
Q 019093          189 EGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYN  268 (346)
Q Consensus       189 g~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g  268 (346)
                        .+.+.+||..-+      .. +.+     .+|         +.+.+..|...+ ++||+.+..          .+..-
T Consensus       299 --g~~v~~~p~s~~------~~-~~~-----~~~---------~~~~~~~Gv~v~-lgtD~~~~~----------~~~~~  344 (468)
T 3lnp_A          299 --GASIIHCPESNL------KL-ASG-----FCP---------IAKLSAANIPLA-IGTDGAASN----------NDLDM  344 (468)
T ss_dssp             --CCEEEECHHHHH------HT-TCC-----CCC---------HHHHHHTTCCEE-ECCCCTTSS----------CCCCH
T ss_pred             --CCEEEEChhhhh------hc-CCC-----CCC---------HHHHHHCCCeEE-EECCCCcCC----------CCCCH
Confidence              466778986422      11 101     122         445677899888 899986531          01111


Q ss_pred             h-hHHHHHHHHHHH----hcCCHHHHHHHHchhhhhhcCCCC--C------CccEEEEe
Q 019093          269 A-PVALSLYAKVFE----EMGALDKLEAFTSFNGPDFYGLPR--N------TSKIKLTK  314 (346)
Q Consensus       269 ~-e~~lp~l~~~~~----~~~~l~~lv~~~s~nPAki~gl~~--k------dAdlvi~d  314 (346)
                      + +..+..++....    ...++++++++++.|||+++|++.  +      .|||+|||
T Consensus       345 ~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~l~~G~~ADlvv~d  403 (468)
T 3lnp_A          345 FSETKTAALLAKGVSQDASAIPAIEALTMATLGGARALGIDDITGSLKPGKAADIQAID  403 (468)
T ss_dssp             HHHHHHHHHHHHHHHTCTTSSCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEEE
T ss_pred             HHHHHHHHHHhhhccCCCCcCCHHHHHHHHHHHHHHHhCCCCCccccCCCCcCCEEEEe
Confidence            2 333333332211    135899999999999999999843  2      89999999

>4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa}

Probab=99.40  E-value=3.3e-11  Score=117.77  Aligned_cols=162  Identities=15%  Similarity=0.088  Sum_probs=96.9

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHH----HHHH-HHHhCCCCcEEEEccC--CHHHHHHHHccCC
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDT----ILQP-LIQRLPQLKVVMEHIT--TMDAVKFVESCKE  189 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~----~l~~-~la~~~g~~lhi~HvS--t~~~l~~i~~akg  189 (346)
                      +.+.++++.+++.|.++.+|+....     ...+. ++.+    .++. .-....+.+..+.|..  +.+.++.+++.  
T Consensus       202 ~~l~~~~~~A~~~g~~v~~H~~e~~-----~~~~~-~~~~~g~~~i~~~~~~g~~~~~~~~~H~~~~~~~~~~~l~~~--  273 (451)
T 4dyk_A          202 DKLEQILVLTEELDASIQMHVHETA-----FEVEQ-AMERNGERPLARLHRLGLLGPRFQAVHMTQVDNDDLAMLVET--  273 (451)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEESCCH-----HHHHH-HHHHHSSCHHHHHHHTTCCSTTEEEEECCCCCHHHHHHHHHH--
T ss_pred             HHHHHHHHHHHHcCCcEEEEeCCCH-----HHHHH-HHHHhCCCHHHHHHHCCCCCCCeEEEECCCCCHHHHHHHHHc--
Confidence            7899999999999999999996531     00110 0100    0100 1122345677777776  56777777764  


Q ss_pred             CeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccch
Q 019093          190 GFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNA  269 (346)
Q Consensus       190 ~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~  269 (346)
                       .+.+.+||..-+      .. +.+     .+|         +.+.+..|...+ ++||+.+...         .+-+--
T Consensus       274 -g~~v~~~p~s~~------~~-~~~-----~~~---------~~~~~~~Gv~v~-lgtD~~~~~~---------~~~~~~  321 (451)
T 4dyk_A          274 -NSSVIHCPESNL------KL-ASG-----FCP---------VEKLWQAGVNVA-IGTDGAASNN---------DLDLLG  321 (451)
T ss_dssp             -TCEEEECHHHHH------HT-TCC-----CCC---------HHHHHHHTCCEE-ECCCCGGGSS---------CCCHHH
T ss_pred             -CCEEEEChhhhh------hc-cCC-----ccc---------HHHHHhCCCeEE-EECCCCccCC---------CCCHHH
Confidence             467778985321      11 101     133         445567799888 8999965310         011111


Q ss_pred             hHHHHHHHHHHH----hcCCHHHHHHHHchhhhhhcCCCC--C------CccEEEEe-ccee
Q 019093          270 PVALSLYAKVFE----EMGALDKLEAFTSFNGPDFYGLPR--N------TSKIKLTK-IPWK  318 (346)
Q Consensus       270 e~~lp~l~~~~~----~~~~l~~lv~~~s~nPAki~gl~~--k------dAdlvi~d-~~~~  318 (346)
                      +..+..++....    ...++++++++++.|||+++|++.  +      .|||+|+| ....
T Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~al~~~T~~~A~~lg~~~~~G~l~~G~~ADlvv~d~~~~~  383 (451)
T 4dyk_A          322 ETRTAALLAKAVYGQATALDAHRALRMATLNGARALGLERLIGSLEAGKAADLVAFDLSGLA  383 (451)
T ss_dssp             HHHHHHHHHHHHHTCTTSSCHHHHHHHHTHHHHHHHTCTTTSSSCCTTSBCCEEEEECCSGG
T ss_pred             HHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHcCCCCCCcCcCCCCcCCEEEEeCCCCc
Confidence            333333332211    135899999999999999999843  2      89999999 4433

>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3

Probab=99.38  E-value=1.7e-11  Score=112.92  Aligned_cols=146  Identities=12%  Similarity=0.091  Sum_probs=92.1

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHh---CCCCcEEEEccCCHHHHHHHHccC--CCe
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQR---LPQLKVVMEHITTMDAVKFVESCK--EGF  191 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~---~~g~~lhi~HvSt~~~l~~i~~ak--g~~  191 (346)
                      ..+.+.++.++++|+||++|+++...      +.     +.+  .+.+   ....+++|.|++...+++.++++.  |..
T Consensus       138 ~~~~~~~~~a~~~~~pv~iH~~~~~~------~~-----~~~--~~l~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~G~~  204 (291)
T 1bf6_A          138 KVFIAAALAHNQTGRPISTHTSFSTM------GL-----EQL--ALLQAHGVDLSRVTVGHCDLKDNLDNILKMIDLGAY  204 (291)
T ss_dssp             HHHHHHHHHHHHHCCCEEEECGGGCS------HH-----HHH--HHHHHTTCCGGGEEECCCCSSCCHHHHHHHHHTTCE
T ss_pred             HHHHHHHHHHHHHCCeEEEeCCCCCC------hH-----HHH--HHHHHcCCCchhEEEECCCCCCCHHHHHHHHHCCCE
Confidence            45777899999999999999986321      11     222  2222   234588999996434444444433  666


Q ss_pred             eEEEccchhhccchhhhccCCCCCceEE-eCCCCChhhHHHHHHHHHcCCccE-EeecCCCCCCccccccCCCCCCccch
Q 019093          192 VAATVTPQHLVLNRNALFQGGLRPHNYC-LPVLKREIHRQAVVSAVTSGSRKF-FLGTDSAPHERGRKECACGCAGIYNA  269 (346)
Q Consensus       192 vt~Et~ph~L~l~~~~~~~~~~~~~~k~-~PPLR~~~d~~aL~~al~~G~Id~-~i~SDHaP~~~~~K~~~~~~~G~~g~  269 (346)
                      |+++++.                   ++ .||  ...+.+.++++++.|.+|- +++||. |+....+    ...| ++.
T Consensus       205 i~~~~~~-------------------~~~~~~--~~~~~~~~~~~~~~~~~dril~~TD~-p~~~~~~----~~~~-~~~  257 (291)
T 1bf6_A          205 VQFDTIG-------------------KNSYYP--DEKRIAMLHALRDRGLLNRVMLSMDI-TRRSHLK----ANGG-YGY  257 (291)
T ss_dssp             EEECCTT-------------------CTTTSC--HHHHHHHHHHHHHTTCGGGEEECCCC-CSGGGSG----GGTS-CCT
T ss_pred             EEEccCc-------------------ccCCCC--HHHHHHHHHHHHHhCCCCeEEEcCCC-CCCccch----hcCC-CCH
Confidence            6666432                   01 133  3456778999999998883 168886 5421011    1124 556


Q ss_pred             hHHHHHHHHHHHhc-CCHHHHHHHHchhhhhhcC
Q 019093          270 PVALSLYAKVFEEM-GALDKLEAFTSFNGPDFYG  302 (346)
Q Consensus       270 e~~lp~l~~~~~~~-~~l~~lv~~~s~nPAki~g  302 (346)
                      +..++.+...+..+ .+.+++.++++.||+|+||
T Consensus       258 ~~~~~~~~~~l~~~g~~~~~~~~~~~~N~~rl~~  291 (291)
T 1bf6_A          258 DYLLTTFIPQLRQSGFSQADVDVMLRENPSQFFQ  291 (291)
T ss_dssp             THHHHTHHHHHHHTTCCHHHHHHHHTHHHHHHCC
T ss_pred             HHHHHHHHHHHHHcCCCHHHHHHHHHHhHHHHhC
Confidence            66666555444444 4899999999999999996

>4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV}

Probab=99.35  E-value=5.5e-11  Score=117.41  Aligned_cols=158  Identities=11%  Similarity=0.061  Sum_probs=95.6

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhh-HH---HHHHHHHHHHHHhCCCCcEEEEccC--CHHHHHHHHccCCC
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDR-EK---VFIDTILQPLIQRLPQLKVVMEHIT--TMDAVKFVESCKEG  190 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~-E~---~av~~~l~~~la~~~g~~lhi~HvS--t~~~l~~i~~akg~  190 (346)
                      +.+.++++.+++.|+++.+|+....-  ....+ +.   ..+.. +  .-....+.+..+.|..  +.+.++++++.   
T Consensus       209 ~~l~~~~~~A~~~g~~v~iH~~e~~~--~~~~~~~~~g~~~i~~-~--~~~g~~~~~~~~~H~~~l~~~~i~~l~~~---  280 (472)
T 4dzh_A          209 ANFERVRMLADQLDMPVHLHTHETAQ--EVADSVAQYGQRPLAR-L--DRLGLVNDRLIAVHMTQLTEAEIHLCAER---  280 (472)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEESCCHH--HHHHHHHHHSSCHHHH-H--HHHTCCSTTEEEEECCSCCHHHHHHHHHH---
T ss_pred             HHHHHHHHHHHHCCCeEEEEeCCCHH--HHHHHHHHhCCCHHHH-H--HHcCCCCCCeEEEeccCCCHHHHHHHHHc---
Confidence            78999999999999999999964310  00000 00   00111 1  1223446677777776  56777777764   


Q ss_pred             eeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccch-
Q 019093          191 FVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNA-  269 (346)
Q Consensus       191 ~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~-  269 (346)
                      .+.+.+||..-+.      . +.+     .+|         +.+.+..|...+ ++||+.+-.          .+..-+ 
T Consensus       281 g~~v~~~p~s~~~------~-~~~-----~~~---------~~~~~~~Gv~v~-lgtD~~~~~----------~~~~~~~  328 (472)
T 4dzh_A          281 GVSVVHCPESNLK------L-ASG-----FCP---------ACALQRASVNLA-IGTDGCASN----------NDLDMFS  328 (472)
T ss_dssp             TCEEEECHHHHHH------T-TCC-----CCC---------HHHHHHTTCEEE-ECCCCTTSS----------CCCCHHH
T ss_pred             CCEEEEChHHHHh------c-CCC-----Ccc---------HHHHHHCCCCEE-EECCCCcCC----------CCCCHHH
Confidence            3566788853221      1 101     123         445677899888 999996421          111112 


Q ss_pred             hHHHHHHHHHHH----hcCCHHHHHHHHchhhhhhcCCCC--C------CccEEEEe
Q 019093          270 PVALSLYAKVFE----EMGALDKLEAFTSFNGPDFYGLPR--N------TSKIKLTK  314 (346)
Q Consensus       270 e~~lp~l~~~~~----~~~~l~~lv~~~s~nPAki~gl~~--k------dAdlvi~d  314 (346)
                      |..+...+....    ...++++++++++.|||+++|++.  +      .|||||+|
T Consensus       329 ~~~~a~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d  385 (472)
T 4dzh_A          329 ENRTAAILAKAVANDATALDAATTLRAATLGGARALGFGDRIGSIEVGKQADLVCVD  385 (472)
T ss_dssp             HHHHHHHHHHHHHTCTTSSCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEEE
T ss_pred             HHHHHHHHhhhhcCCCCcCCHHHHHHHHHHHHHHHcCCCCCCcccCCCCcCCEEEEc
Confidence            333333322111    135899999999999999999843  2      89999999

>2puz_A Imidazolonepropionase; NYSGXRC, PSI-2, N-formimino-L- glutamate, product-bound, structural genomics, protein STRU initiative; HET: NIG; 1.83A {Agrobacterium tumefaciens str} SCOP: b.92.1.10 c.1.9.17 PDB: 2gok_A

Probab=99.35  E-value=6.5e-12  Score=121.66  Aligned_cols=69  Identities=13%  Similarity=0.114  Sum_probs=47.9

Q ss_pred             HHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHchhhhhhcCCC-C------
Q 019093          233 VSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLP-R------  305 (346)
Q Consensus       233 ~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~~~~l~~lv~~~s~nPAki~gl~-~------  305 (346)
                      ...++.|...+ ++|||.|++.          ...++...+...  +...+.++++++++.+.|||+++|+. +      
T Consensus       315 ~~~~~~Gv~~~-lgsD~~~~~~----------~~~~l~~~~~~~--~~~~~ls~~~al~~~T~~~A~~lg~~~~~Gsi~~  381 (419)
T 2puz_A          315 QALRDAGAEIA-LATDCNPGTS----------PLTSLLLTMNMG--ATLFRMTVEECLTATTRNAAKALGLLAETGTLEA  381 (419)
T ss_dssp             HHHHHHTCCEE-ECCCCCSSSC----------CBCCHHHHHHHH--HHHHCCCHHHHHHHTTHHHHHHTTCTTTSSSCCT
T ss_pred             HHHHHCCCeEE-EECCCCCCCC----------ccccHHHHHHHh--ccccCCCHHHHHHHHHHHHHHHcCCCCCccccCC
Confidence            34556699999 8999976531          112232222222  12346799999999999999999994 3      


Q ss_pred             -CCccEEEEe
Q 019093          306 -NTSKIKLTK  314 (346)
Q Consensus       306 -kdAdlvi~d  314 (346)
                       |+|||+|+|
T Consensus       382 Gk~ADlvvld  391 (419)
T 2puz_A          382 GKSADFAIWD  391 (419)
T ss_dssp             TSBCCEEEEC
T ss_pred             CCcCCEEEEC
Confidence             289999999

>4aql_A Guanine deaminase; hydrolase, purine metabolism; HET: TXC; 1.99A {Homo sapiens} PDB: 2uz9_A* 3e0l_A

Probab=99.29  E-value=1.1e-10  Score=115.76  Aligned_cols=154  Identities=13%  Similarity=0.072  Sum_probs=94.1

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHH-------HHHHHHH--HhCCCCcEEEEccC--CHHHHHHHH
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFID-------TILQPLI--QRLPQLKVVMEHIT--TMDAVKFVE  185 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~-------~~l~~~l--a~~~g~~lhi~HvS--t~~~l~~i~  185 (346)
                      +.+.++++.+++.|.++.+|+....       .|...+.       +.++ .+  ....+.+..+.|..  +.+.+++++
T Consensus       243 e~l~~~~~~A~~~g~~v~~H~~e~~-------~e~~~~~~~~~~~~~~~~-~~~~~g~l~~~~~~~H~~~l~~~~~~~l~  314 (476)
T 4aql_A          243 TLMGELGNIAKTRDLHIQSHISENR-------DEVEAVKNLYPSYKNYTS-VYDKNNLLTNKTVMAHGCYLSAEELNVFH  314 (476)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEESCSH-------HHHHHHHHHCTTSSSHHH-HHHTTTCCSTTEEEEECTTCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCceEEEecCCH-------HHHHHHHHHhCCCCCHHH-HHHHcCCCCCCEEEEeCCCCCHHHHHHHH
Confidence            7899999999999999999986431       1222221       1110 11  22345577788865  677788887


Q ss_pred             ccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCC
Q 019093          186 SCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAG  265 (346)
Q Consensus       186 ~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G  265 (346)
                      +.   .+.+..||-.      +... +-+     .+|         +.+.++.|..-. +|||..+...           
T Consensus       315 ~~---g~~v~~~P~s------n~~l-~~g-----~~p---------~~~~~~~Gv~v~-lGtD~~~~~~-----------  358 (476)
T 4aql_A          315 ER---GASIAHCPNS------NLSL-SSG-----FLN---------VLEVLKHEVKIG-LGTDVAGGYS-----------  358 (476)
T ss_dssp             HH---TCEEEECHHH------HHHT-TCC-----CCC---------HHHHHHTTCEEE-ECCCTTTSSC-----------
T ss_pred             Hc---CCEEEECchh------hhhh-Ccc-----hHH---------HHHHHHCCCcEE-EeCCCCCCCC-----------
Confidence            64   3567789853      2211 111     133         334556687777 8999854321           


Q ss_pred             ccch-hHHHHHHHHH-HH------hcCCHHHHHHHHchhhhhhcCCCC--C------CccEEEEe
Q 019093          266 IYNA-PVALSLYAKV-FE------EMGALDKLEAFTSFNGPDFYGLPR--N------TSKIKLTK  314 (346)
Q Consensus       266 ~~g~-e~~lp~l~~~-~~------~~~~l~~lv~~~s~nPAki~gl~~--k------dAdlvi~d  314 (346)
                      ..-+ +....+.+.. ..      ...++++++++.+.|||+++|++.  +      +|||+|||
T Consensus       359 ~~~~~~~~~a~~~~~~~~~~~~~~~~l~~~~al~~aT~~~A~~lgl~~~~G~l~~G~~ADlvv~d  423 (476)
T 4aql_A          359 YSMLDAIRRAVMVSNILLINKVNEKSLTLKEVFRLATLGGSQALGLDGEIGNFEVGKEFDAILIN  423 (476)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTTSSSSCCCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEEC
T ss_pred             CCHHHHHHHHHHHHhhhhcccCCCCcCCHHHHHHHHHHHHHHHhCCCCCcceeCCCCCCCEEEEc
Confidence            0111 2222222221 11      235899999999999999999842  2      89999999

>3v7p_A Amidohydrolase family protein; iron binding site, enzyme functio initiative, EFI; HET: TLA; 1.35A {Nitratiruptor SP}

Probab=99.20  E-value=5.5e-10  Score=109.08  Aligned_cols=160  Identities=13%  Similarity=0.107  Sum_probs=96.9

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHH---------------------HHHHHHHhCCCCcEEEEcc
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDT---------------------ILQPLIQRLPQLKVVMEHI  175 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~---------------------~l~~~la~~~g~~lhi~Hv  175 (346)
                      +.+.++++.+++.|+++.+|+....       .|.+.+.+                     ... .+..+.+.++.+.|.
T Consensus       187 e~l~~~~~~A~~~g~~v~~H~~E~~-------~e~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~H~  258 (427)
T 3v7p_A          187 ILAKRALDIAKKYGSLVSVHFMESR-------AEREWLDKGSGEFAKFFKEFLNQTRPVNDTKS-FLELFKELHTLFVHM  258 (427)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEESCSH-------HHHHHHHHSCSHHHHHHHHHTCCCSCSSCHHH-HHHTTTTSEEEEEEC
T ss_pred             HHHHHHHHHHHhCCCCEEEEeCCCH-------HHHHHHHHhcCcchhhhhhhccCCCcccCHHH-HHhhhcCCCEEEEEC
Confidence            6788999999999999999975331       12222211                     110 133335778888887


Q ss_pred             C--CHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCC
Q 019093          176 T--TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHE  253 (346)
Q Consensus       176 S--t~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~  253 (346)
                      .  +.+.++++++   ..+.+..||..-      ... +  .   -.||+|.-           .|..-. +|||..+-.
T Consensus       259 ~~~~~~~~~~l~~---~g~~~~~~p~s~------~~~-~--~---~~~~~~~~-----------~Gv~v~-lgtD~~~~~  311 (427)
T 3v7p_A          259 VWANEEEIQTIAS---YNAHIIHCPISN------RLL-G--N---GVLDLEKI-----------KSIPYA-IATDGLSSN  311 (427)
T ss_dssp             TTCCHHHHHHHHH---SEEEEEECHHHH------HHT-T--C---CCCCTTTT-----------TTSCEE-ECCCCTTSC
T ss_pred             CCCCHHHHHHHHH---cCCEEEECHHHH------HHh-c--C---CCCCHHHH-----------CCCeEE-EeCCCCCCC
Confidence            7  5777888776   467888999532      111 1  1   13677643           577777 899953211


Q ss_pred             ccccccCCCCCCccch-hHHHHHHHHHHHh-cCCHHHHHHHHchhhhhhcCCCC------CCccEEEEe--cceeecC
Q 019093          254 RGRKECACGCAGIYNA-PVALSLYAKVFEE-MGALDKLEAFTSFNGPDFYGLPR------NTSKIKLTK--IPWKVPE  321 (346)
Q Consensus       254 ~~~K~~~~~~~G~~g~-e~~lp~l~~~~~~-~~~l~~lv~~~s~nPAki~gl~~------kdAdlvi~d--~~~~v~~  321 (346)
                      .          ...-+ |..+.++...... ..++++++++++.|||+++|++.      +.|||+|+|  ..|.++.
T Consensus       312 ~----------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~t~~~a~~~g~~~g~l~~G~~Ad~~~~d~~~~~~~~~  379 (427)
T 3v7p_A          312 Y----------SLNMYEELKAALFVHPNKEATTFAKELIIRATKAGYDALGFEGGEIAVGKDADMQLIDLPEGLTNVE  379 (427)
T ss_dssp             S----------CCCHHHHHHHHHHHSTTSCHHHHHHHHHHHHTHHHHHHHTCSCSSCCTTSBCCEEEEECCTTCCCGG
T ss_pred             C----------CCCHHHHHHHHHHhccCCCcccCHHHHHHHHHHHHHHHhCCCCceeCCCCccCEEEEcCCCccCCCc
Confidence            0          00111 2233332210000 12357999999999999999753      289999999  5665543

>3ooq_A Amidohydrolase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, H PSI-2; 2.06A {Thermotoga maritima}

Probab=99.16  E-value=1.6e-10  Score=111.50  Aligned_cols=151  Identities=18%  Similarity=0.168  Sum_probs=92.4

Q ss_pred             HHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHH-HHHHHHccCCCeeEEEcc
Q 019093          119 CVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMD-AVKFVESCKEGFVAATVT  197 (346)
Q Consensus       119 l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~-~l~~i~~akg~~vt~Et~  197 (346)
                      ..+.|+.+.+.|+++.+|+...+           .+.+.+  .+++..|.++.|.|..... .++.+++.   .+.+.+|
T Consensus       209 ~~e~l~~~~~~~~~v~iHa~~~~-----------~i~~~~--~~~~~~g~~~~i~H~~~~~~~~~~l~~~---gv~v~~~  272 (396)
T 3ooq_A          209 KMEVGEMVLRKKIPARMHAHRAD-----------DILTAI--RIAEEFGFNLVIEHGTEAYKISKVLAEK---KIPVVVG  272 (396)
T ss_dssp             HHHHHHHHHTTSSCEEEEECSHH-----------HHHHHH--HHHHHHTCCEEEEECTTGGGGHHHHHHH---TCCEEEC
T ss_pred             hHHHHHHHHcCCCcEEEEECchh-----------HHHHHH--HHHHHcCCCEEEecCchHHHHHHHHHHC---CCCEEEC
Confidence            44566666788999999997642           233455  4555568999999998532 24444443   3566788


Q ss_pred             chhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHH
Q 019093          198 PQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYA  277 (346)
Q Consensus       198 ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~  277 (346)
                      |.+.+.+...               +|. .....+...+..|..-+ ++||+ |...         .+  .    +...+
T Consensus       273 P~~~~~~~~~---------------~~~-~~~~~~~~l~~~Gv~v~-lgtD~-~~~~---------~~--~----l~~~~  319 (396)
T 3ooq_A          273 PLLTFRTKLE---------------LKD-LTMETIAKLLKDGVLIA-LMCDH-PVIP---------LE--F----ATVQA  319 (396)
T ss_dssp             CCSSCCCSGG---------------GTT-CCTTHHHHHHHTTCCEE-ECCTT-TTSC---------GG--G----HHHHH
T ss_pred             cccccccchh---------------HHh-hhhHHHHHHHHCCCEEE-EEcCC-CccC---------cc--H----HHHHH
Confidence            8654322111               110 01112344556688788 89998 3211         01  1    12222


Q ss_pred             HHHHh-cCCHHHHHHHHchhhhhhcCCCC--------CCccEEEEe-ccee
Q 019093          278 KVFEE-MGALDKLEAFTSFNGPDFYGLPR--------NTSKIKLTK-IPWK  318 (346)
Q Consensus       278 ~~~~~-~~~l~~lv~~~s~nPAki~gl~~--------kdAdlvi~d-~~~~  318 (346)
                      ....+ ..++++++++++.|||++||++.        ++|||+|+| ..+.
T Consensus       320 ~~~~~~gl~~~~al~~~T~n~A~~lg~~~~~G~i~~G~~ADlvv~d~~~~~  370 (396)
T 3ooq_A          320 ATAMRYGAKEEDLLKILTVNPAKILGLEDRIGSIEPGKDADLVVWSGHPFD  370 (396)
T ss_dssp             HHGGGGTCCHHHHHHTTTHHHHHHTTCTTTSSSCCTTSBCCEEEESSCTTS
T ss_pred             HHHHHcCCCHHHHHHHHHHHHHHHhCCCCCeeeECCCCcCCEEEECCCccc
Confidence            22233 35899999999999999999943        189999998 5443

>4f0l_A Amidohydrolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Brucella melitensis biovar abortus}

Probab=99.15  E-value=2.9e-09  Score=104.42  Aligned_cols=149  Identities=15%  Similarity=0.045  Sum_probs=89.3

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHH--------HHHHHHHHhCCCCcEEEEccC--CHHHHHHHHc
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFID--------TILQPLIQRLPQLKVVMEHIT--TMDAVKFVES  186 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~--------~~l~~~la~~~g~~lhi~HvS--t~~~l~~i~~  186 (346)
                      +.+.++++.++  |.++.+|+....       .|...+.        ..+  .-....+.+..+.|..  +.+.++.+++
T Consensus       224 ~~l~~~~~~a~--g~~v~~H~~e~~-------~~~~~~~~~~g~~~~~~l--~~~g~l~~~~~~~H~~~~~~~~~~~l~~  292 (458)
T 4f0l_A          224 DELDSVTQLLP--DAPVHIHVAEQV-------KEVEDCIAWSGKRPVEWL--LDHQDVTARWCLIHATHMSDEETKHMAK  292 (458)
T ss_dssp             HHHHHHTTSST--TSCEEEEESCSH-------HHHHHHHHHHSSCHHHHH--HHHSCCCTTEEEEECCSCCHHHHHHHHH
T ss_pred             HHHHHHHHHhc--CCCEEEEeCCCH-------HHHHHHHHHhCCCHHHHH--HHcCCCCCCeEEEEeccCCHHHHHHHHH
Confidence            67777777776  999999986431       1111111        111  1122356777788876  6778888876


Q ss_pred             cCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCc
Q 019093          187 CKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGI  266 (346)
Q Consensus       187 akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~  266 (346)
                      .   .+.+..||..      +..- +.+     .+|         +.+.+..|..-. ++||. +            .+.
T Consensus       293 ~---g~~~~~~p~s------~~~l-~~~-----~~~---------~~~~~~~Gv~v~-lgtD~-~------------~~~  334 (458)
T 4f0l_A          293 A---GAIAGLCPVT------EANL-GDG-----TFN---------ATEFAAAGGKFG-IGSDS-N------------VLI  334 (458)
T ss_dssp             H---TCEEEECHHH------HHHT-TCC-----CCC---------HHHHHHTTCEEE-ECCBT-T------------SSC
T ss_pred             c---CCeEEECccc------cccc-cCC-----Ccc---------HHHHHHCCCeEE-EECCC-C------------CCC
Confidence            4   4667788853      1111 111     123         344566788888 89992 1            111


Q ss_pred             cch-hHHHHHHHHHHHh----------cCCHHHHHHHHchhhhhhcCCCC------CCccEEEEe
Q 019093          267 YNA-PVALSLYAKVFEE----------MGALDKLEAFTSFNGPDFYGLPR------NTSKIKLTK  314 (346)
Q Consensus       267 ~g~-e~~lp~l~~~~~~----------~~~l~~lv~~~s~nPAki~gl~~------kdAdlvi~d  314 (346)
                      .-+ |..+..++.....          ..++++++++.+.|||+.+|++.      |.|||+|+|
T Consensus       335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~~A~~lg~~~G~l~~G~~ADlvv~d  399 (458)
T 4f0l_A          335 GIGDELRQLEYSQRLYHRARNVLAANEGSTGRALFDGAVLGGNIAMGRPEDGLKKGASADFVSLD  399 (458)
T ss_dssp             CHHHHHHHHHHHHHHHHTCSSCSCSTTSBHHHHHHHHHHHHHHHHTTCTTCSSSTTSBCCEEEEE
T ss_pred             CHHHHHHHHHHHHhhhccCccccCCcccCCHHHHHHHHHHHHHHHhCCCCCcCCCCCcCCEEEEe
Confidence            222 3334333332221          24688999999999999999742      289999999

>3iv8_A N-acetylglucosamine-6-phosphate deacetylase; IDP01334, fruct phosphate, carbohydrate metabolism, hydrolase; HET: F6P; 2.53A {Vibrio cholerae} PDB: 3egj_A*

Probab=99.13  E-value=1e-09  Score=105.86  Aligned_cols=59  Identities=15%  Similarity=-0.032  Sum_probs=44.8

Q ss_pred             eEEecCccccceecCCC-----ccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHh
Q 019093            2 ELTLTQPDDWHLHLRDG-----DLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILK   60 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~g-----~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~   60 (346)
                      .+|+||+||+|+|.+.|     ..++|++.+++     ||+|+++.+++|.|+....+.++.+.+..++
T Consensus        52 ~~v~PGfID~HvHg~~G~~~~d~~~~e~l~~~~~a~~~~GvTt~l~t~~T~~~e~l~~al~~~~~~~~~  120 (381)
T 3iv8_A           52 ANLSPGFIDLQLNGCGGVMFNDEITAETIDTMHKANLKSGCTSFLPTLITSSDENMRQAIAAAREYQAK  120 (381)
T ss_dssp             EEEEECEEEEEECEETTEETTTSCSHHHHHHHHHHHHHTTEEEEEEEEESCCHHHHHHHHHHHHHHHHH
T ss_pred             CEEccCeEeeeecccCCCCCCCCCCHHHHHHHHHHHHhCCccccccccCCCCHHHHHHHHHHHHHHHhc
Confidence            47999999999996542     24567777754     9999999999999876666666666665443

>2bb0_A Imidazolonepropionase; TIM barrel, hydrolase; 2.00A {Bacillus subtilis} SCOP: b.92.1.10 c.1.9.17 PDB: 2g3f_A

Probab=99.13  E-value=5.6e-09  Score=101.08  Aligned_cols=148  Identities=14%  Similarity=0.142  Sum_probs=90.7

Q ss_pred             ChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccC--CHHHHHHHHccCCCe
Q 019093          114 DLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHIT--TMDAVKFVESCKEGF  191 (346)
Q Consensus       114 d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvS--t~~~l~~i~~akg~~  191 (346)
                      +. +.+.++++.+++.|.++.+|+..... .+       .+....      ..|. ..+.|..  +.+.++++++.   .
T Consensus       228 ~~-e~l~~~~~~a~~~g~~v~~H~~~~~~-~~-------~~~~~~------~~g~-~~~~H~~~~~~~~i~~~~~~---g  288 (421)
T 2bb0_A          228 TV-SQSRRYLQKAAEAGFGLKIHADEIDP-LG-------GAELAG------KLKA-VSADHLVGTSDEGIKKLAEA---G  288 (421)
T ss_dssp             CH-HHHHHHHHHHHHTTCEEEEEECSSSC-CS-------HHHHHH------HTTC-SEEEECTTCCHHHHHHHHHH---T
T ss_pred             CH-HHHHHHHHHHHHCCCCEEEEeccccc-cC-------HHHHHH------HcCC-cEEhhhhcCCHHHHHHHHHc---C
Confidence            44 78999999999999999999753211 00       111111      1232 2344544  67788888764   3


Q ss_pred             eEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhH
Q 019093          192 VAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPV  271 (346)
Q Consensus       192 vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~  271 (346)
                      +.+-.||.+.+.    + + +  ..   .+|         ++..++.|.... ++||+.|.+.         + ...+  
T Consensus       289 ~~~~~~p~~~~~----l-~-~--~~---~~~---------~~~~~~~Gv~v~-lgtD~~~~~~---------~-~~~~--  335 (421)
T 2bb0_A          289 TIAVLLPGTTFY----L-G-K--ST---YAR---------ARAMIDEGVCVS-LATDFNPGSS---------P-TENI--  335 (421)
T ss_dssp             CEEEECHHHHHH----T-T-C--CC---CCC---------HHHHHHTTCCEE-ECCCBBTTTB---------C-CCCH--
T ss_pred             CeEEECCchhhh----h-c-c--cc---cch---------HHHHHHCCCeEE-EeCCCCCCCC---------c-ccCH--
Confidence            566778864321    1 1 1  01   122         456778898888 8999855310         0 0011  


Q ss_pred             HHHHHHH-HHHhcCCHHHHHHHHchhhhhhcCCC-C-------CCccEEEEe
Q 019093          272 ALSLYAK-VFEEMGALDKLEAFTSFNGPDFYGLP-R-------NTSKIKLTK  314 (346)
Q Consensus       272 ~lp~l~~-~~~~~~~l~~lv~~~s~nPAki~gl~-~-------kdAdlvi~d  314 (346)
                       +-.+.. +...+.++++++++.+.|||+.+|+. +       |+|||+|+|
T Consensus       336 -~~~~~~~~~~~~ls~~eal~~~T~~~A~~lg~~~~~Gsl~~Gk~ADlvvld  386 (421)
T 2bb0_A          336 -QLIMSIAALHLKMTAEEIWHAVTVNAAYAIGKGEEAGQLKAGRSADLVIWQ  386 (421)
T ss_dssp             -HHHHHHHHHHSCCCHHHHHHHTTHHHHHHTTCTTTSSCCSTTSBCCEEEES
T ss_pred             -HHHHHHHhcccCCCHHHHHHHHHHHHHHHhCccCCccccCCCCcCCEEEEC
Confidence             222222 22345799999999999999999994 3       289999999

>3mdu_A N-formimino-L-glutamate iminohydrolase; amonohydralase family, N-formimino-L-glutamate iminohydrolas guanidino-L-glutamate; HET: NGQ; 1.40A {Pseudomonas aeruginosa} PDB: 3mdw_A*

Probab=99.05  E-value=1.4e-08  Score=99.71  Aligned_cols=154  Identities=14%  Similarity=0.075  Sum_probs=89.9

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhh-HH---HHHHHHHHHHHHhCCCCcEEEEccC--CHHHHHHHHccCCC
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDR-EK---VFIDTILQPLIQRLPQLKVVMEHIT--TMDAVKFVESCKEG  190 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~-E~---~av~~~l~~~la~~~g~~lhi~HvS--t~~~l~~i~~akg~  190 (346)
                      +.+.++++.++ .|.++.+|+....-  ....+ +.   ..+.. +  .-....+.+..+.|..  +.+.++++++.   
T Consensus       214 e~l~~~~~~A~-~g~~v~~H~~e~~~--e~~~~~~~~g~~~v~~-l--~~~g~~~~~~~~~H~~~~~~~~i~~la~~---  284 (453)
T 3mdu_A          214 QQIATVLAAGH-DDLPVHIHIAEQQK--EVDDCQAWSGRRPLQW-L--YENVAVDQRWCLVHATHADPAEVAAMARS---  284 (453)
T ss_dssp             HHHHHHHTSSC-TTSCEEEEESCSHH--HHHHHHHHHSSCHHHH-H--HHHSCCCTTEEEEECCSCCHHHHHHHHHH---
T ss_pred             HHHHHHHHHHh-cCCCEEEEeCCCHH--HHHHHHHHhCCCHHHH-H--HHcCCCCCCeEEEEcCCCCHHHHHHHHHc---
Confidence            78889999888 99999999643210  00000 00   01111 1  1223456677888876  77888888764   


Q ss_pred             eeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccch-
Q 019093          191 FVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNA-  269 (346)
Q Consensus       191 ~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~-  269 (346)
                      .+.+..||..-      ..- +  ..   .+|         +.+.+..|..-. ++||. +.+            ..-+ 
T Consensus       285 g~~v~~~P~sn------~~l-g--~g---~~p---------~~~~~~~Gv~v~-lgtD~-~~~------------~~~~~  329 (453)
T 3mdu_A          285 GAVAGLCLSTE------ANL-G--DG---IFP---------ATDFLAQGGRLG-IGSDS-HVS------------LSVVE  329 (453)
T ss_dssp             TCEEEECHHHH------HHT-T--CC---CCC---------HHHHHHTTCEEE-ECCBT-CSC------------CCHHH
T ss_pred             CCEEEECchhH------hhc-C--CC---CCC---------HHHHHHCCCEEE-EECCC-CCC------------CCHHH
Confidence            46778899531      111 1  11   233         233456687777 89993 211            1111 


Q ss_pred             hHHHHHHHH-HHHh----------cCCHHHHHHHHchhhhhhcCCCC------CCccEEEEe
Q 019093          270 PVALSLYAK-VFEE----------MGALDKLEAFTSFNGPDFYGLPR------NTSKIKLTK  314 (346)
Q Consensus       270 e~~lp~l~~-~~~~----------~~~l~~lv~~~s~nPAki~gl~~------kdAdlvi~d  314 (346)
                      +..+..+.. ....          ..++++++++++.|||+++|+..      +.|||+|+|
T Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~a~~~~~~~G~l~~G~~AD~~~~d  391 (453)
T 3mdu_A          330 ELRWLEYGQRLRDRKRNRLYRDDQPMIGRTLYDAALAGGAQALGQPIGSLAVGRRADLLVLD  391 (453)
T ss_dssp             HHHHHHHHHHHHHTCSCCSCBTTBCCHHHHHHHHHHHHHHHHHTSSCSSCCTTSBCCEEEEC
T ss_pred             HHHHHHHHHhhhccCCccccCcccCCCHHHHHHHHHHHHHHHhCCCCCccCCCCcCCEEEEe
Confidence            222222221 1111          34688999999999999999732      289999999

>3icj_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structur initiative; HET: KCX; 1.95A {Pyrococcus furiosus} PDB: 3etk_A* 3igh_X*

Probab=99.01  E-value=1.3e-08  Score=102.45  Aligned_cols=164  Identities=16%  Similarity=0.121  Sum_probs=94.6

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccC--CHHHHHHHHccCCCeeEE
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHIT--TMDAVKFVESCKEGFVAA  194 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvS--t~~~l~~i~~akg~~vt~  194 (346)
                      +.|.++++.+.+.|..+.+||...           .++...+. .+.+ .+.|..|.|.+  +.+.++.+++.   .+.+
T Consensus       329 e~l~~~v~~A~~~G~~v~~Ha~gd-----------~ai~~~l~-a~~~-~~~r~~ieH~~~~~~e~i~~la~~---gv~~  392 (534)
T 3icj_A          329 DEIVEVIERAKPLGLDVAVHAIGD-----------KAVDVALD-AFEE-AEFSGRIEHASLVRDDQLERIKEL---KVRI  392 (534)
T ss_dssp             HHHHHHHHHHTTTTCEEEEEECSH-----------HHHHHHHH-HHHH-HTCCCEEEECCBCCHHHHHHHHHH---TCEE
T ss_pred             HHHHHHHHHHHHCCCEEEEEEcCh-----------HHHHHHHH-HHHh-ccCCCEEEECCCCCHHHHHHHHHc---CCeE
Confidence            789999999999999999999742           23334442 1221 12677889987  78888888764   4677


Q ss_pred             EccchhhccchhhhccCCCCC-ceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHH
Q 019093          195 TVTPQHLVLNRNALFQGGLRP-HNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVAL  273 (346)
Q Consensus       195 Et~ph~L~l~~~~~~~~~~~~-~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~l  273 (346)
                      .+||.+...+. .+.. ..|. +.+-.+|+|         +.++.  +.+-+|||. |.+.-      .+  +.++...+
T Consensus       393 ~~~P~~~~~~~-~~~~-~lg~~r~~~~~p~~---------~l~~~--v~valGSD~-p~~~~------~p--~~~~~~av  450 (534)
T 3icj_A          393 SAQPHFIVSDW-WIVN-RVGEERAKWAYRLK---------TLSSI--TKLGFSTDS-PIEPA------DP--WVSIDAAV  450 (534)
T ss_dssp             EECTTHHHHCT-THHH-HHHHHHGGGBTCHH---------HHHHH--SCEEECCTT-TTSCC------CH--HHHHHHHH
T ss_pred             EEccccccchh-HHHH-hhCHHHHhccHHHH---------HHHHh--CCEEeecCC-CCCCC------CH--HHHHHHHH
Confidence            88998776432 1110 0000 111112322         22333  444489997 43210      00  00110000


Q ss_pred             HHHHHH-HHhcCCHHHHHHHHchhhhhhcCCCC-------CCccEEEEe-cceee
Q 019093          274 SLYAKV-FEEMGALDKLEAFTSFNGPDFYGLPR-------NTSKIKLTK-IPWKV  319 (346)
Q Consensus       274 p~l~~~-~~~~~~l~~lv~~~s~nPAki~gl~~-------kdAdlvi~d-~~~~v  319 (346)
                      .- ... -..+.+.++..+..+.|+|+.+|+.+       |.|||+|+| .+++.
T Consensus       451 ~r-~~~~~~~~ls~~eaL~~~T~~~A~~lg~e~~GsLe~Gk~ADlvvld~dpl~~  504 (534)
T 3icj_A          451 NR-YVVDPGERVSREEALHLYTHGSAQVTLAEDLGKLERGFRAEYIILDRDPLKE  504 (534)
T ss_dssp             HC-CSSCGGGCCCHHHHHHHTTHHHHHHTTCTTCSCCSTTSBCCEEEESSCTTC-
T ss_pred             hc-cccCcccCCCHHHHHHHHHHHHHHHhCCCCCeEECCCCCcCEEEECCChhhc
Confidence            00 000 12245899999999999999998741       389999998 54444

>1yrr_A N-acetylglucosamine-6-phosphate deacetylase; (beta/alpha)8 barrel, beta sandwich, hydrolase; 2.00A {Escherichia coli} SCOP: b.92.1.5 c.1.9.10 PDB: 1ymy_A 2p50_A 2p53_A*

Probab=98.94  E-value=9.9e-10  Score=105.21  Aligned_cols=33  Identities=12%  Similarity=0.130  Sum_probs=28.6

Q ss_pred             cCCHHHHHHHHchhhhhhcCCCC--------CCccEEEEec
Q 019093          283 MGALDKLEAFTSFNGPDFYGLPR--------NTSKIKLTKI  315 (346)
Q Consensus       283 ~~~l~~lv~~~s~nPAki~gl~~--------kdAdlvi~d~  315 (346)
                      ..++++++++.+.|||+++|++.        |.|||+|+|.
T Consensus       325 g~~~~~al~~aT~~~A~~lg~~~~~G~i~~G~~ADlvvld~  365 (382)
T 1yrr_A          325 GIALDEVLRMATLYPARAIGVEKRLGTLAAGKVANLTAFTP  365 (382)
T ss_dssp             CCCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEECT
T ss_pred             CCCHHHHHHHHHHHHHHHhCCCCCCCccCCCCCCCEEEECC
Confidence            46899999999999999999842        2899999993

>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15

Probab=98.94  E-value=1.3e-08  Score=93.60  Aligned_cols=241  Identities=17%  Similarity=0.199  Sum_probs=132.9

Q ss_pred             CccccceecCC-Cc-------------cccccccc--cCCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEE
Q 019093            7 QPDDWHLHLRD-GD-------------LLKAVVPH--SVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTP   70 (346)
Q Consensus         7 G~ID~HvH~r~-g~-------------~~ke~~~s--~sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~   70 (346)
                      +.||.|+|+.. ..             ..-+++..  ...||+..|.++......++...+    +.+++ ..  -.|..
T Consensus        13 ~iID~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~l~~m~~~GV~~~v~~~~~~~~~~n~~~~----~~~~~-~p--~r~~~   85 (288)
T 2ffi_A           13 TAIDSHAHVFSRGLNLASQRRYAPNYDAPLGDYLGQLRAHGFSHGVLVQPSFLGTDNRYLL----SALQT-VP--GQLRG   85 (288)
T ss_dssp             CCEEBCCCCBCHHHHHHTTCCSSCCSCBCHHHHHHHHHHTSCCEECCBCCGGGTTCCHHHH----HHHHH-ST--TTBCC
T ss_pred             CceeecccccCCCCCCCCcccCCCCCCCCHHHHHHHHHHhCCCeEEEECCccccccHHHHH----HHHHH-CC--CCEEE
Confidence            68999999865 21             01111111  127888777765211123343222    22222 21  12333


Q ss_pred             EEEEEeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhH
Q 019093           71 LMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDRE  150 (346)
Q Consensus        71 ~~~~~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E  150 (346)
                      .+++  .+....++|.++.+.| +.|+|+++.+.   .+..+.+  ..+.++++.++++|++|.+|+.+..+        
T Consensus        86 ~~~v--~p~~~~~el~~~~~~g-~~Gi~~~~~~~---~~~~~~~--~~~~~~~~~a~~~~lpv~iH~~~~~~--------  149 (288)
T 2ffi_A           86 VVML--ERDVEQATLAEMARLG-VRGVRLNLMGQ---DMPDLTG--AQWRPLLERIGEQGWHVELHRQVADI--------  149 (288)
T ss_dssp             BBCC--CSSCCHHHHHHHHTTT-CCEEECCCSSS---CCCCTTS--TTTHHHHHHHHHHTCEEEECSCTTTH--------
T ss_pred             EEEe--CCCCCHHHHHHHHHCC-CeEEEEecccC---CCCCccc--HHHHHHHHHHHHCCCeEEEeechhhH--------
Confidence            3343  5544467898888888 88999987532   1123334  57889999999999999999987532        


Q ss_pred             HHHHHHHHHHHHHhCCCCcEEEEccCCHHH--------HHHHHccC-CCeeEEEccchhhccchhhhccCCCCCceEEeC
Q 019093          151 KVFIDTILQPLIQRLPQLKVVMEHITTMDA--------VKFVESCK-EGFVAATVTPQHLVLNRNALFQGGLRPHNYCLP  221 (346)
Q Consensus       151 ~~av~~~l~~~la~~~g~~lhi~HvSt~~~--------l~~i~~ak-g~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~P  221 (346)
                          ..+.. .+.+++ +++.+.|..+...        .+.+++.. .-+++++++..+.....+..            |
T Consensus       150 ----~~~~~-~~~~~p-l~~vi~H~g~~~~~~~~~~~~~~~~~~l~~~~n~y~~~sg~~~~~~~~~~------------~  211 (288)
T 2ffi_A          150 ----PVLVR-ALQPYG-LDIVIDHFGRPDARRGLGQPGFAELLTLSGRGKVWVKVSGIYRLQGSPEE------------N  211 (288)
T ss_dssp             ----HHHHH-HHTTTT-CCEEESGGGSCCTTSCTTCTTHHHHTTCCCCSCEEEEEECGGGSSSCHHH------------H
T ss_pred             ----HHHHH-HHHHCC-CCEEEECCCCCCCCCCCCChhHHHHHHHHhCCCEEEEeCcchhhccccCC------------C
Confidence                12221 355666 9999999986532        34444332 23677777653221100000            0


Q ss_pred             CCCChhhHHHHHHHHHc-CCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHh-cCCHHHHHHHHchhhhh
Q 019093          222 VLKREIHRQAVVSAVTS-GSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEE-MGALDKLEAFTSFNGPD  299 (346)
Q Consensus       222 PLR~~~d~~aL~~al~~-G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~-~~~l~~lv~~~s~nPAk  299 (346)
                         -...+..+-+.+.. |.=.+++|||. |+....        +.++....+    +.+.+ ..+.+.+.++++.|++|
T Consensus       212 ---~~~~~~~~~~~~~~~g~drll~gSD~-P~~~~~--------~~~~~~~~~----~~~~~~~~~~~~~~~i~~~NA~r  275 (288)
T 2ffi_A          212 ---LAFARQALCALEAHYGAERLMWGSDW-PHTQHE--------SEVSFGSAV----EQFEALGCSAQLRQALLLDTARA  275 (288)
T ss_dssp             ---HHHHHHHHHHHHHHTCGGGEEEECCT-TCTTCT--------TTCCHHHHH----HHHHHHCCCHHHHHHHHTHHHHH
T ss_pred             ---HHHHHHHHHHHHHHhCCCceEEecCC-CCCCCC--------CCCCHHHHH----HHHHHHCCCHHHHHHHHHHCHHH
Confidence               01222333333333 43344579997 885321        112222222    22222 24788999999999999


Q ss_pred             hcCCC
Q 019093          300 FYGLP  304 (346)
Q Consensus       300 i~gl~  304 (346)
                      +||++
T Consensus       276 l~~l~  280 (288)
T 2ffi_A          276 LFGFE  280 (288)
T ss_dssp             HTTCC
T ss_pred             HhCcc
Confidence            99995

>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}

Probab=98.92  E-value=6.8e-08  Score=89.61  Aligned_cols=242  Identities=14%  Similarity=0.144  Sum_probs=130.7

Q ss_pred             cCccccceecCC-Ccc-------------cccccccc--CCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEE
Q 019093            6 TQPDDWHLHLRD-GDL-------------LKAVVPHS--VSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFT   69 (346)
Q Consensus         6 PG~ID~HvH~r~-g~~-------------~ke~~~s~--sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~   69 (346)
                      +++||.|+|+-. ...             .-|++...  .-||+.+|.+.......++..    ..+.+++ ..  -.|.
T Consensus        25 ~~~iDtH~Hl~~~~~p~~~~~~~~p~~~~~~e~~l~~~~~~GV~~~V~v~~~~~~~~n~~----~~~~~~~-~p--~r~~   97 (294)
T 4i6k_A           25 MNCIDTHAHVFSTQDHSIETARYAPDYEATVQSFISHLDEHNFTHGVLVQPSFLGTNNQA----MLNAIQQ-YP--DRLK   97 (294)
T ss_dssp             CCSEEEEECCBCTTSCCCTTCSCCCCSCBCHHHHHHHHHHTTCCEEEEECCGGGTTCCHH----HHHHHHH-ST--TTEE
T ss_pred             CCceEeeeEeecCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCeEEEecCcccccchHH----HHHHHHH-CC--CeEE
Confidence            468999999965 221             11111111  268887776632222223322    1222222 21  1344


Q ss_pred             EEEEEEeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhh
Q 019093           70 PLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDR  149 (346)
Q Consensus        70 ~~~~~~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~  149 (346)
                      ..+++  .+....++|.++.+.| +.|+|++...   .+.....+  ..+.+.++.++++|+++.+|+....        
T Consensus        98 g~~~v--~P~~~~~eL~~l~~~g-v~Gi~l~~~~---~~~~~~~~--~~~~~~~~~a~~~glpv~iH~~~~~--------  161 (294)
T 4i6k_A           98 GIAVV--QHTTTFNELVNLKAQG-IVGVRLNLFG---LNLPALNT--PDWQKFLRNVESLNWQVELHAPPKY--------  161 (294)
T ss_dssp             EEECC--CTTCCHHHHHHHHTTT-EEEEEEECTT---SCCCCSSS--HHHHHHHHHHHHTTCEEEEECCHHH--------
T ss_pred             EEEEe--CCcccHHHHHHHHHCC-CcEEEeccCC---CCCCCccc--HHHHHHHHHHHHcCCEEEEeeCcch--------
Confidence            33343  6654567888888887 8999987531   11112334  7899999999999999999997531        


Q ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEccCCH--------HHHHHHHc-cCCCeeEEEccchhhccchhhhccCCCCCceEEe
Q 019093          150 EKVFIDTILQPLIQRLPQLKVVMEHITTM--------DAVKFVES-CKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCL  220 (346)
Q Consensus       150 E~~av~~~l~~~la~~~g~~lhi~HvSt~--------~~l~~i~~-akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~  220 (346)
                          +..+.+ .+.+++ +++.|.|.+..        +..+.+.+ ++.-++++.++--+.+-+ ..            .
T Consensus       162 ----l~~~~~-~l~~~p-~~~Vi~H~g~p~~~~g~~~~~~~~~~~l~~~~nv~~k~Sg~~~~~~-~~------------~  222 (294)
T 4i6k_A          162 ----LVQLLP-QLNEYS-FDVVIDHFGRVDPVKGIEDPDYQKFLSLLNVKQHWIKVSGFYRLGA-TP------------S  222 (294)
T ss_dssp             ----HHHHHH-HHTTSS-SCEEESGGGCCCTTTCTTCHHHHHHHHHCCTTTEEEECCCGGGSSS-TT------------H
T ss_pred             ----HHHHHH-HHHHCC-CCEEEECCCCCCCCCCCCCHHHHHHHHHHhCCCEEEEecccccccc-cC------------C
Confidence                122331 234555 99999999863        13333332 222368888765322110 00            0


Q ss_pred             CCCCChhhHHHHHHHHHc-CCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHchhhhh
Q 019093          221 PVLKREIHRQAVVSAVTS-GSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPD  299 (346)
Q Consensus       221 PPLR~~~d~~aL~~al~~-G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~~~~l~~lv~~~s~nPAk  299 (346)
                      |+   ..+...|-+++.. |.=.+++|||. |+..-.        |.++....+-.+...   ..+.+...+++..|++|
T Consensus       223 ~~---~~~~~~l~~~~~~~g~dRll~gSD~-P~~~~~--------~~~~y~~~~~~l~~~---~~~~~~~~~i~~~NA~r  287 (294)
T 4i6k_A          223 NI---NIAQQAYNIFKEKGFLHKLIWGSDW-PHTQHE--------SLITYEDAIKAFKQI---VFDKHEQCLILNQNPTE  287 (294)
T ss_dssp             HH---HHHHHHHHHHHHHTCGGGEECCCCB-TCTTCT--------TTCCHHHHHHHHHHH---CCCHHHHHHHHTHHHHH
T ss_pred             Cc---hhhHHHHHHHHHHhCcccEEEeCCC-CCCCCc--------CCCCHHHHHHHHHHH---CCCHHHHHHHHHHCHHH
Confidence            10   1223333333321 33344479995 885322        112221122222221   25788999999999999


Q ss_pred             hcCCC
Q 019093          300 FYGLP  304 (346)
Q Consensus       300 i~gl~  304 (346)
                      +||++
T Consensus       288 l~~l~  292 (294)
T 4i6k_A          288 LFGFS  292 (294)
T ss_dssp             HHTC-
T ss_pred             HhCCC
Confidence            99984

>3mtw_A L-arginine carboxypeptidase CC2672; hydrolase; HET: KCX M3R; 1.70A {Caulobacter vibrioides}

Probab=98.89  E-value=1.1e-07  Score=87.90  Aligned_cols=32  Identities=3%  Similarity=-0.093  Sum_probs=28.4

Q ss_pred             cCCHHHHHHHHchhhhhhcCC-CCC-------CccEEEEe
Q 019093          283 MGALDKLEAFTSFNGPDFYGL-PRN-------TSKIKLTK  314 (346)
Q Consensus       283 ~~~l~~lv~~~s~nPAki~gl-~~k-------dAdlvi~d  314 (346)
                      ..++++++++++.||||+||| +++       +|||||||
T Consensus       338 gls~~eal~~~T~npA~~lgl~~~~GsI~~G~~ADlvvld  377 (403)
T 3mtw_A          338 GATPLQAIQSATLTAAEALGRSKDVGQVAVGRYGDMIAVA  377 (403)
T ss_dssp             TCCHHHHHHHTTHHHHHHHTCTTTSSSCCTTSBCCEEEES
T ss_pred             CCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCcceEEEEC
Confidence            458999999999999999999 442       89999998

>3hpa_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified}

Probab=98.68  E-value=2.2e-07  Score=89.97  Aligned_cols=164  Identities=13%  Similarity=0.018  Sum_probs=88.0

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChh-hhHHH---HHHHHHHHHHHhCCCCcEEEEccC--CHHHHHHHHccCCC
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIF-DREKV---FIDTILQPLIQRLPQLKVVMEHIT--TMDAVKFVESCKEG  190 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~-~~E~~---av~~~l~~~la~~~g~~lhi~HvS--t~~~l~~i~~akg~  190 (346)
                      +.+.++.+.+.+.|..+..|+.....  ... ..+..   .+. ..  .-....+.+..+.|..  +....+++++.   
T Consensus       240 ~~~~~~~~~a~~~g~~~~~h~~~~~~--~~~~~~~~~g~~~~~-~~--~~~~~~~~~~~~~h~~~~~~~~~~~~~~~---  311 (479)
T 3hpa_A          240 DLMRDAAVLAREYGVSLHTHLAENVN--DIAYSREKFGMTPAE-YA--EDLGWVGHDVWHAHCVQLDDAGIGLFART---  311 (479)
T ss_dssp             HHHHHHHHHHHHHTCEEEEEESCSHH--HHHC-------CHHH-HH--HHTTCCSTTEEEEECTTCCHHHHHHHHHH---
T ss_pred             HHHHHHHHHHHhcCCeEEeecccchH--HHHHHHHHcCCchHH-HH--hhhccccccceeeeeEecchhHHHHHHhc---
Confidence            67788888899999999999754311  000 00000   011 11  1223445667777765  44455555543   


Q ss_pred             eeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchh
Q 019093          191 FVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAP  270 (346)
Q Consensus       191 ~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e  270 (346)
                      .+....+|......       +.+     .+|.+         ..+..|..-. ++||..+...         ......+
T Consensus       312 ~~~~~~~p~~~~~~-------~~~-----~~~~~---------~~~~~~~~v~-~gtD~~~~~~---------~~~~~~~  360 (479)
T 3hpa_A          312 GTGVAHCPCSNMRL-------ASG-----IAPVK---------KMRLAGVPVG-LGVDGSASND---------GAQMVAE  360 (479)
T ss_dssp             TCEEEECHHHHHHT-------TCC-----CCCHH---------HHHHHTCCEE-ECCCCTTSSC---------CCCHHHH
T ss_pred             CCceeecccccccc-------ccC-----ccchh---------HHHhcCCcEE-eeccccccCC---------CccHHHH
Confidence            34455666322111       101     12211         1233355556 7899754321         1112233


Q ss_pred             HHHHHHH-HHHHh--cCCHHHHHHHHchhhhhhcCCCC-C------CccEEEEe--cceee
Q 019093          271 VALSLYA-KVFEE--MGALDKLEAFTSFNGPDFYGLPR-N------TSKIKLTK--IPWKV  319 (346)
Q Consensus       271 ~~lp~l~-~~~~~--~~~l~~lv~~~s~nPAki~gl~~-k------dAdlvi~d--~~~~v  319 (346)
                      ..+..++ .....  ..++++++++++.|||++|||++ +      +|||||||  ..|..
T Consensus       361 ~~~~~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~G~I~~G~~ADlvv~D~~~~~~~  421 (479)
T 3hpa_A          361 VRQALLLQRVGFGPDAMTAREALEIATLGGAKVLNRDDIGALKPGMAADFAAFDLRQPLFA  421 (479)
T ss_dssp             HHHHHHHHHHHHCTTSCCHHHHHHHTTHHHHHHHTCSSSSSCSTTSBCCEEEEETTSGGGT
T ss_pred             HHHHHHHHhhhccccCCCHHHHHHHHHHHHHHHhCCCCCccCCCCCcCCEEEEcCCCcccc
Confidence            3333332 22222  35899999999999999999953 2      89999999  44443

>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12

Probab=98.62  E-value=8.1e-07  Score=80.32  Aligned_cols=140  Identities=16%  Similarity=0.110  Sum_probs=73.8

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCC-CCcEEEEccCC--HHHHHHHHccCCCeeE
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLP-QLKVVMEHITT--MDAVKFVESCKEGFVA  193 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~-g~~lhi~HvSt--~~~l~~i~~akg~~vt  193 (346)
                      ..+.+.++.++++|+||++|+.+..          ..+.+++    .++. ..++++ |.-+  .+.++.+.+   ..++
T Consensus       114 ~~f~~~~~~a~~~~~Pv~iH~~~a~----------~~~~~il----~~~~~~~~~i~-H~~~g~~~~~~~~~~---~g~~  175 (259)
T 1zzm_A          114 WLLDEQLKLAKRYDLPVILHSRRTH----------DKLAMHL----KRHDLPRTGVV-HGFSGSLQQAERFVQ---LGYK  175 (259)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEESCH----------HHHHHHH----HHHCCTTCEEE-TTCCSCHHHHHHHHH---TTCE
T ss_pred             HHHHHHHHHHHHhCCcEEEEecccH----------HHHHHHH----HhcCCCCCEEE-EcCCCCHHHHHHHHH---CCCE
Confidence            5678889999999999999998641          1122222    2221 245554 8743  333332221   2344


Q ss_pred             EEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCcc-EEeecCCCCCCccccccCCCCCCccchhHH
Q 019093          194 ATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRK-FFLGTDSAPHERGRKECACGCAGIYNAPVA  272 (346)
Q Consensus       194 ~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id-~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~  272 (346)
                      ..+++.- .+     .              +.++-| .+.+.+   -.| ++++||. |+..-..     ..|-.+-...
T Consensus       176 i~~~g~~-~~-----~--------------~~~~~~-~~~~~~---~~dril~eTD~-P~~~p~~-----~~g~~~~p~~  225 (259)
T 1zzm_A          176 IGVGGTI-TY-----P--------------RASKTR-DVIAKL---PLASLLLETDA-PDMPLNG-----FQGQPNRPEQ  225 (259)
T ss_dssp             EEECGGG-GC-----T--------------TTCSHH-HHHHHS---CGGGEEECCCB-TSSCCTT-----CTTSCCCGGG
T ss_pred             EEECcee-ec-----c--------------ccHHHH-HHHHhC---CHHHEEEecCC-CCccCCC-----CCCCCCcHHH
Confidence            4554421 00     0              111222 233333   223 3379996 6642211     0122222223


Q ss_pred             HHHHHHHH-Hh-cCCHHHHHHHHchhhhhhcCCC
Q 019093          273 LSLYAKVF-EE-MGALDKLEAFTSFNGPDFYGLP  304 (346)
Q Consensus       273 lp~l~~~~-~~-~~~l~~lv~~~s~nPAki~gl~  304 (346)
                      ++.....+ .. ..+.+++.+.+..||+|+|||+
T Consensus       226 l~~~~~~la~~~g~~~e~~~~~~~~Na~rl~~l~  259 (259)
T 1zzm_A          226 AARVFAVLCELRREPADEIAQALLNNTYTLFNVP  259 (259)
T ss_dssp             HHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHCCC
T ss_pred             HHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhCcC
Confidence            55444433 22 3489999999999999999984

>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12

Probab=98.57  E-value=2.7e-06  Score=76.89  Aligned_cols=233  Identities=14%  Similarity=0.096  Sum_probs=117.4

Q ss_pred             ccccceecCC-Cc----cccccccc--cCCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCC
Q 019093            8 PDDWHLHLRD-GD----LLKAVVPH--SVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTT   80 (346)
Q Consensus         8 ~ID~HvH~r~-g~----~~ke~~~s--~sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~   80 (346)
                      +||.|+|+.. ..    ..-+.+..  ...|++++|.+. +     +++..+...+ +.+..   -++..  ++++.|..
T Consensus         3 ~iD~H~Hl~~~~~~~~~~~~~~~l~~~~~~Gv~~~v~~~-~-----~~~~~~~~~~-~~~~~---p~~~~--~~g~hP~~   70 (265)
T 1yix_A            3 LVDSHCHLDGLDYESLHKDVDDVLAKAAARDVKFCLAVA-T-----TLPSYLHMRD-LVGER---DNVVF--SCGVHPLN   70 (265)
T ss_dssp             EEEEEECGGGSCTTTTCSSHHHHHHHHHHTTEEEEEECC-S-----SHHHHHHHHH-HHCSC---TTEEE--EECCCTTC
T ss_pred             EEEEeeCCCchhhcccccCHHHHHHHHHHCCCCEEEEeC-C-----CHHHHHHHHH-HHHHC---CCeEE--EEEeCCCc
Confidence            7999999865 22    11122211  127888887753 2     2232233333 22222   24333  33234422


Q ss_pred             -----CHHHHHHHHHc------CCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhh
Q 019093           81 -----SPDEIKLARKT------GVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDR  149 (346)
Q Consensus        81 -----~~~el~~l~~~------G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~  149 (346)
                           ..+++.++.+.      | .+|++.+..    .++... +. ..+.+.++.++++|+||.+|+.+..        
T Consensus        71 ~~~~~~~~~l~~~~~~~~~~~iG-e~Gl~~~~~----~~~~~~-q~-~~~~~~~~~a~~~~~pv~iH~~~~~--------  135 (265)
T 1yix_A           71 QNDPYDVEDLRRLAAEEGVVALG-ETGLDYYYT----PETKVR-QQ-ESFIHHIQIGRELNKPVIVHTRDAR--------  135 (265)
T ss_dssp             CSSCCCHHHHHHHHTSTTEEEEE-EEEEECTTC----SSCHHH-HH-HHHHHHHHHHHHHTCCEEEEEESCH--------
T ss_pred             ccccchHHHHHHHhccCCeEEEE-ccccCCCcC----CCChHH-HH-HHHHHHHHHHHHhCCCEEEEecCch--------
Confidence                 24677766542      3 356675431    111111 22 5788899999999999999998531        


Q ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEccC--CHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChh
Q 019093          150 EKVFIDTILQPLIQRLPQLKVVMEHIT--TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREI  227 (346)
Q Consensus       150 E~~av~~~l~~~la~~~g~~lhi~HvS--t~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~  227 (346)
                        ..+.+++  .-..+++.++++ |.-  +.+.++.+.+   .++++++++. +.+                    +..+
T Consensus       136 --~~~~~~l--~~~~~p~~~~v~-H~~~~~~~~~~~~~~---~g~~~~~sg~-~~~--------------------~~~~  186 (265)
T 1yix_A          136 --ADTLAIL--REEKVTDCGGVL-HCFTEDRETAGKLLD---LGFYISFSGI-VTF--------------------RNAE  186 (265)
T ss_dssp             --HHHHHHH--HHTTGGGTCEEE-TTCCSCHHHHHHHHT---TTCEEEECGG-GGS--------------------TTCH
T ss_pred             --HHHHHHH--HhcCCCCCCEEE-EcCCCCHHHHHHHHH---CCcEEEECCc-ccc--------------------CchH
Confidence              1122222  111235667766 874  3444443332   3567777652 110                    0012


Q ss_pred             hHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHH--hcCCHHHHHHHHchhhhhhcCCC
Q 019093          228 HRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFE--EMGALDKLEAFTSFNGPDFYGLP  304 (346)
Q Consensus       228 d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~--~~~~l~~lv~~~s~nPAki~gl~  304 (346)
                      .-..+.+.+-.+.  ++++||. |+....+..     |-.+-...++.....+.  ...+.+++.+++..||+|+||++
T Consensus       187 ~~~~~~~~~~~dr--ll~~TD~-P~~~~~~~~-----g~~~~~~~l~~~~~~l~~~~~~~~~~~~~i~~~Na~rl~~l~  257 (265)
T 1yix_A          187 QLRDAARYVPLDR--LLVETDS-PYLAPVPHR-----GKENQPAMVRDVAEYMAVLKGVAVEELAQVTTDNFARLFHID  257 (265)
T ss_dssp             HHHHHHHHSCGGG--EEECCCB-TSCCCTTCT-----TSCCCGGGHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHhCChHH--EEEecCC-CCCCCcccC-----CCCCchHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHhCcC
Confidence            2223444432223  3489997 764222110     11111122333322222  23478999999999999999994

>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*

Probab=98.55  E-value=3.6e-06  Score=78.38  Aligned_cols=105  Identities=14%  Similarity=0.205  Sum_probs=62.0

Q ss_pred             cEEEEEEEEeCCCC---CHHHHHHHHHc-CCeeEEEEeecCCccCC--CCCccChHHHHHHHHHHhHHcCCcEEEecCCC
Q 019093           67 NFTPLMTLYLTDTT---SPDEIKLARKT-GVVFAVKLYPAGATTNS--QDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVT  140 (346)
Q Consensus        67 d~~~~~~~~~~~~~---~~~el~~l~~~-G~v~~~Kif~~~~~~~~--~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~  140 (346)
                      .|...+++  .+..   ..+||.++.+. | +.|+|+.+.+.....  +..+.+  ..+.++++.++++|++|.+|+.+.
T Consensus        94 r~~~~~~v--~p~~~~~~~~el~~~~~~~g-~~gi~i~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~~lpv~iH~~~~  168 (327)
T 2dvt_A           94 RFLAFAAL--PLQDPDAATEELQRCVNDLG-FVGALVNGFSQEGDGQTPLYYDL--PQYRPFWGEVEKLDVPFYLHPRNP  168 (327)
T ss_dssp             TEEEEECC--CTTSHHHHHHHHHHHHHTTC-CCEEEEESSBCCTTCCSCBCTTS--GGGHHHHHHHHHHTCCEEEECCCC
T ss_pred             ceEEEeec--CcCCHHHHHHHHHHHHhcCC-ceEEEECCCCCCCcccCCCCCCC--cchHHHHHHHHHcCCeEEECCCCC
Confidence            35444444  4432   23577777654 7 789999875321100  123334  678999999999999999999764


Q ss_pred             CCCC-----C--------h-hhhHH-HHHHH-HHHHHHHhCCCCcEEEEccC
Q 019093          141 DPIV-----D--------I-FDREK-VFIDT-ILQPLIQRLPQLKVVMEHIT  176 (346)
Q Consensus       141 ~~~~-----~--------~-~~~E~-~av~~-~l~~~la~~~g~~lhi~HvS  176 (346)
                      ....     +        + ...|. .++.+ ++...+.+++++++.+.|.+
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~P~l~~v~~H~g  220 (327)
T 2dvt_A          169 LPQDSRIYDGHPWLLGPTWAFAQETAVHALRLMASGLFDEHPRLNIILGHMG  220 (327)
T ss_dssp             CGGGCGGGTTCGGGSGGGTHHHHHHHHHHHHHHHTTHHHHCTTCCEEESGGG
T ss_pred             CcchhhhhccchhhhcccccccHHHHHHHHHHHHcCcHhhCCCCeEEEeccc
Confidence            3110     0        0 11121 11111 12224678899999999986

>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}

Probab=98.53  E-value=1.1e-06  Score=80.18  Aligned_cols=136  Identities=18%  Similarity=0.198  Sum_probs=74.1

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccC--CHHHHHHHHccCCCeeEE
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHIT--TMDAVKFVESCKEGFVAA  194 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvS--t~~~l~~i~~akg~~vt~  194 (346)
                      ..+.+.++.++++|+||++|+.+..             ...++ .+.++...++++ |.-  +.+.++.+.+   ..++.
T Consensus       126 ~~f~~~~~la~~~~lPv~iH~~~a~-------------~~~~~-il~~~~~~~~v~-H~~~g~~~~~~~~~~---~g~~i  187 (272)
T 2y1h_A          126 QVLIRQIQLAKRLNLPVNVHSRSAG-------------RPTIN-LLQEQGAEKVLL-HAFDGRPSVAMEGVR---AGYFF  187 (272)
T ss_dssp             HHHHHHHHHHHHHTCCEEEECTTCH-------------HHHHH-HHHHTTCCSEEE-ETCCSCHHHHHHHHH---TTCEE
T ss_pred             HHHHHHHHHHHHhCCcEEEEeCCcH-------------HHHHH-HHHhCCCCCEEE-EccCCCHHHHHHHHH---CCCEE
Confidence            4678899999999999999998641             11221 234444557777 763  3333333322   23455


Q ss_pred             EccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHH
Q 019093          195 TVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALS  274 (346)
Q Consensus       195 Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp  274 (346)
                      ++++-.+                      ++++-|+ +.+.+-...+ + ++||. |+....+       |-..-...++
T Consensus       188 ~~~g~~~----------------------~~~~~~~-~~~~~~~drl-l-~eTD~-P~~~p~~-------g~~~~p~~l~  234 (272)
T 2y1h_A          188 SIPPSII----------------------RSGQKQK-LVKQLPLTSI-C-LETDS-PALGPEK-------QVRNEPWNIS  234 (272)
T ss_dssp             EECGGGG----------------------TCHHHHH-HHHHSCGGGE-E-ECCCT-TSSCSST-------TSCCCGGGHH
T ss_pred             EECCccc----------------------CcHHHHH-HHHhCCHHHE-E-EecCC-CCCCCCC-------CCcCcHHHHH
Confidence            5544210                      1122222 3333322233 5 89996 6532211       1111112233


Q ss_pred             HHHHHH-H-hcCCHHHHHHHHchhhhhhcCC
Q 019093          275 LYAKVF-E-EMGALDKLEAFTSFNGPDFYGL  303 (346)
Q Consensus       275 ~l~~~~-~-~~~~l~~lv~~~s~nPAki~gl  303 (346)
                      .+...+ . ...+.+.+.+.+..||+|+||+
T Consensus       235 ~~~~~la~~~g~~~e~~~~~~~~N~~~l~~~  265 (272)
T 2y1h_A          235 ISAEYIAQVKGISVEEVIEVTTQNALKLFPK  265 (272)
T ss_dssp             HHHHHHHHHHTSCHHHHHHHHHHHHHHHSTT
T ss_pred             HHHHHHHHHHCcCHHHHHHHHHHHHHHHHHh
Confidence            333222 2 2348999999999999999998

>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}

Probab=98.47  E-value=4.6e-06  Score=75.26  Aligned_cols=142  Identities=13%  Similarity=0.180  Sum_probs=77.4

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCC--CCcEEEEccCC--HHHHHHHHccCCCee
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLP--QLKVVMEHITT--MDAVKFVESCKEGFV  192 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~--g~~lhi~HvSt--~~~l~~i~~akg~~v  192 (346)
                      ..+.+.++.++++|+||.+|+.+..             ..+++ .+.++.  +.++.+ |..+  .+.+..+.+.  .++
T Consensus       109 ~~~~~~~~~a~~~~~pv~iH~~~~~-------------~~~~~-~l~~~p~~~~~~i~-H~~~g~~~~~~~~l~~--~~~  171 (265)
T 2gzx_A          109 EVFRKQIALAKRLKLPIIIHNREAT-------------QDCID-ILLEEHAEEVGGIM-HSFSGSPEIADIVTNK--LNF  171 (265)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEEESCH-------------HHHHH-HHHHTTGGGTCEEE-TTCCSCHHHHHHHHHT--SCC
T ss_pred             HHHHHHHHHHHHcCCcEEEEecccH-------------HHHHH-HHHhcCCCCCcEEE-EcCCCCHHHHHHHHHH--CCc
Confidence            5788999999999999999998641             12221 244555  678855 5543  3322222221  356


Q ss_pred             EEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHH
Q 019093          193 AATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVA  272 (346)
Q Consensus       193 t~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~  272 (346)
                      +++++.... +.                    ..+.-..+++.+-.+  .++++||. |+......     .|-++....
T Consensus       172 y~~~sg~~~-~~--------------------~~~~~~~~i~~~~~d--ril~gSD~-P~~~~~~~-----~g~~~~~~~  222 (265)
T 2gzx_A          172 YISLGGPVT-FK--------------------NAKQPKEVAKHVSME--RLLVETDA-PYLSPHPY-----RGKRNEPAR  222 (265)
T ss_dssp             EEEECGGGG-CS--------------------SCCHHHHHHHHSCTT--TEEECCCT-TSCCCTTC-----TTSCCCGGG
T ss_pred             eEEecceee-cC--------------------CcHHHHHHHHhCChh--hEEEccCC-CCCCCccc-----CCCCCChHH
Confidence            777664211 00                    001222344443212  23479997 76432210     122222233


Q ss_pred             HHHHHHHHHh--cCCHHHHHHHHchhhhhhcCCC
Q 019093          273 LSLYAKVFEE--MGALDKLEAFTSFNGPDFYGLP  304 (346)
Q Consensus       273 lp~l~~~~~~--~~~l~~lv~~~s~nPAki~gl~  304 (346)
                      ++.+...+.+  ..+.+.+.+++..||+|+||++
T Consensus       223 ~~~~~~~l~~~~~~~~~~~~~i~~~Na~rl~~~~  256 (265)
T 2gzx_A          223 VTLVAEQIAELKGLSYEEVCEQTTKNAEKLFNLN  256 (265)
T ss_dssp             HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhCCc
Confidence            4444443332  3588999999999999999983

>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*

Probab=98.44  E-value=3.1e-06  Score=78.59  Aligned_cols=150  Identities=9%  Similarity=0.047  Sum_probs=78.2

Q ss_pred             HHHHHHHHhHHcCCcEEEecC-CCCCCCChhhhHHHHHHHHHHHHHHhCCC---CcEEEEccCCHHHHHHHHcc--CCCe
Q 019093          118 KCVHVLEEMVEQNMPLLVHGE-VTDPIVDIFDREKVFIDTILQPLIQRLPQ---LKVVMEHITTMDAVKFVESC--KEGF  191 (346)
Q Consensus       118 ~l~~~l~~~~~~g~~v~vHaE-~~~~~~~~~~~E~~av~~~l~~~la~~~g---~~lhi~HvSt~~~l~~i~~a--kg~~  191 (346)
                      .+.+.++.++++|+||++|+. ...-      .     ...+  .+.+..|   .++.+.|.-+..+.+.++++  +|..
T Consensus       152 ~~~~~~~lA~~~~~pv~iH~~~~~~~------~-----~~~~--~~l~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~G~~  218 (314)
T 2vc7_A          152 VIRAAAIANKETKVPIITHSNAHNNT------G-----LEQQ--RILTEEGVDPGKILIGHLGDTDNIDYIKKIADKGSF  218 (314)
T ss_dssp             HHHHHHHHHHHHCCCEEEECCTTTTH------H-----HHHH--HHHHHTTCCGGGEEETTGGGCCCHHHHHHHHHTTCE
T ss_pred             HHHHHHHHHHHHCCEEEEeCCCcccC------h-----HHHH--HHHHHcCCCcccEEEECCCCCCCHHHHHHHHHcCCE
Confidence            456678889999999999997 2110      1     1222  1222223   47789998532223333332  1443


Q ss_pred             eEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCcc--EEeecCCCCCCc-cccccCCCC-CCcc
Q 019093          192 VAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRK--FFLGTDSAPHER-GRKECACGC-AGIY  267 (346)
Q Consensus       192 vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id--~~i~SDHaP~~~-~~K~~~~~~-~G~~  267 (346)
                      |....+..              .++    +  +....++.+.+.+..|-.|  + ++||- |+.. .....+.-. .|-+
T Consensus       219 i~~~~~~~--------------~~~----~--~~~~~~~~i~~~~~~g~~dril-leTD~-~~~~~~~~~~p~~~~~g~~  276 (314)
T 2vc7_A          219 IGLDRYGL--------------DLF----L--PVDKRNETTLRLIKDGYSDKIM-ISHDY-CCTIDWGTAKPEYKPKLAP  276 (314)
T ss_dssp             EEECCTTC--------------TTT----S--CHHHHHHHHHHHHHTTCTTTEE-ECCCC-BSSBCCGGGCTTSHHHHCT
T ss_pred             EEEeCCCc--------------ccC----C--CHHHHHHHHHHHHHcCCCCeEE-EcCCc-cccccccccchhhhhcCCC
Confidence            33322110              000    0  1133455666777776667  7 89996 4321 000000000 1223


Q ss_pred             --chhHHHHHHHHHHHhc-CCHHHHHHHHchhhhhhcC
Q 019093          268 --NAPVALSLYAKVFEEM-GALDKLEAFTSFNGPDFYG  302 (346)
Q Consensus       268 --g~e~~lp~l~~~~~~~-~~l~~lv~~~s~nPAki~g  302 (346)
                        +....++.+...+..+ .+.+++.+++..||+|+||
T Consensus       277 ~~~~~~~~~~~~~~l~~~g~~~e~~~~~~~~N~~rlf~  314 (314)
T 2vc7_A          277 RWSITLIFEDTIPFLKRNGVNEEVIATIFKENPKKFFS  314 (314)
T ss_dssp             TCSTTHHHHTHHHHHHHTTCCHHHHHHHHTHHHHHHTC
T ss_pred             CcCHHHHHHHHHHHHHHcCCCHHHHHHHHHHCHHHHhC
Confidence              3334454443333333 4899999999999999986

>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12

Probab=98.40  E-value=1.6e-05  Score=71.86  Aligned_cols=236  Identities=14%  Similarity=0.066  Sum_probs=113.9

Q ss_pred             ccccceecCC-Ccc-ccccc-cc-cCCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCC--
Q 019093            8 PDDWHLHLRD-GDL-LKAVV-PH-SVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTS--   81 (346)
Q Consensus         8 ~ID~HvH~r~-g~~-~ke~~-~s-~sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~--   81 (346)
                      +||.|+|+.. ... +.+.+ .. ...|++++|++..      +++..+...+.+++ ..   ++..  ++++.|...  
T Consensus         5 ~iD~H~Hl~~~~~~~~~~~~l~~~~~~Gv~~~v~~~~------~~~~~~~~~~l~~~-~~---~i~~--~~G~hP~~~~~   72 (264)
T 1xwy_A            5 MFDIGVNLTSSQFAKDRDDVVACAFDAGVNGLLITGT------NLRESQQAQKLARQ-YS---SCWS--TAGVHPHDSSQ   72 (264)
T ss_dssp             CEEEEECTTSGGGTTTHHHHHHHHHHTTCCEEEECCC------SHHHHHHHHHHHHH-ST---TEEE--EECCCGGGGGG
T ss_pred             EEEEeeCCCChhhccCHHHHHHHHHHCCCCEEEEeCC------CHHHHHHHHHHHHh-CC---CEEE--EEEECCccccc
Confidence            8999999965 211 11222 11 1378888888642      23334444443333 21   3322  332344211  


Q ss_pred             -----HHHHHHHHHcCCeeEE-----EEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHH
Q 019093           82 -----PDEIKLARKTGVVFAV-----KLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREK  151 (346)
Q Consensus        82 -----~~el~~l~~~G~v~~~-----Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~  151 (346)
                           .++|.++.+...+.++     +.+..    .+.... .. ..+.+.++.++++|+||++|+.+.           
T Consensus        73 ~~~~~~~~l~~~~~~~~~~~iGE~Gld~~~~----~~~~~~-q~-~~f~~~l~~a~~~~lpv~iH~~~a-----------  135 (264)
T 1xwy_A           73 WQAATEEAIIELAAQPEVVAIGECGLDFNRN----FSTPEE-QE-RAFVAQLRIAADLNMPVFMHCRDA-----------  135 (264)
T ss_dssp             CCHHHHHHHHHHHTSTTEEEEEEEEEETTTC----SSCHHH-HH-HHHHHHHHHHHHHTCCEEEEEESC-----------
T ss_pred             CCHHHHHHHHHHhcCCCeEEEEEeccCCCCC----CCcHHH-HH-HHHHHHHHHHHHhCCcEEEEcCCc-----------
Confidence                 2355555543223333     32211    111011 11 457889999999999999999753           


Q ss_pred             HHHHHHHHHHHHhCC--CCcEEEEccC--CHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChh
Q 019093          152 VFIDTILQPLIQRLP--QLKVVMEHIT--TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREI  227 (346)
Q Consensus       152 ~av~~~l~~~la~~~--g~~lhi~HvS--t~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~  227 (346)
                        ....++ .+.++.  ..++++ |.-  +.+.++.+.+   ..+++.++.. +.    .+               +.. 
T Consensus       136 --~~~~~~-il~~~~~~~~~~v~-H~~~g~~~~~~~~~~---~g~yi~~~g~-~~----~~---------------~~~-  187 (264)
T 1xwy_A          136 --HERFMT-LLEPWLDKLPGAVL-HCFTGTREEMQACVA---HGIYIGITGW-VC----DE---------------RRG-  187 (264)
T ss_dssp             --HHHHHH-HHGGGGGGSSCEEE-CSCCCCHHHHHHHHH---TTCEEEECGG-GG----CT---------------TTS-
T ss_pred             --hHHHHH-HHHhcCCCCCcEEE-EccCCCHHHHHHHHH---CCeEEEECcc-cc----CC---------------cCc-
Confidence              112231 233332  467755 973  3333332222   2456666541 11    00               011 


Q ss_pred             hHHHHHHHHHcCCcc-EEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHH-H-hcCCHHHHHHHHchhhhhhcCCC
Q 019093          228 HRQAVVSAVTSGSRK-FFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVF-E-EMGALDKLEAFTSFNGPDFYGLP  304 (346)
Q Consensus       228 d~~aL~~al~~G~Id-~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~-~-~~~~l~~lv~~~s~nPAki~gl~  304 (346)
                        +.+.+.++..-.| ++++||. |+..-.+-.+ ...|-.+-...++.....+ . ...+.+++.+++..||+|+|||+
T Consensus       188 --~~l~~~~~~~~~drll~eTD~-P~~~~~~~~~-~~~g~~n~p~~~~~~~~~~a~~~g~~~e~~~~~~~~Na~rl~~l~  263 (264)
T 1xwy_A          188 --LELRELLPLIPAEKLLIETDA-PYLLPRDLTP-KPSSRRNEPAHLPHILQRIAHWRGEDAAWLAATTDANVKTLFGIA  263 (264)
T ss_dssp             --HHHHHHGGGSCGGGEEECCCT-TSCCCTTCTT-CCCSSCCCGGGHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHCCC
T ss_pred             --HHHHHHHHhCCHHHEEEecCC-CCcCcccccc-ccCCCCCchHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhCcc
Confidence              1233444443344 3479996 6632110000 0012111122344333322 2 34589999999999999999984

>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15

Probab=98.38  E-value=1.9e-06  Score=79.63  Aligned_cols=89  Identities=13%  Similarity=0.207  Sum_probs=57.0

Q ss_pred             HHHHHHHHH-cCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCC-----CC-----h--hh
Q 019093           82 PDEIKLARK-TGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPI-----VD-----I--FD  148 (346)
Q Consensus        82 ~~el~~l~~-~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~-----~~-----~--~~  148 (346)
                      .+||.++.+ .| +.|+|+++.+.    +....+  ..+.++++.++++|++|.+|+.+....     ..     +  ..
T Consensus       106 ~~el~~~~~~~g-~~gi~~~~~~~----~~~~~~--~~~~~~~~~a~~~~lpv~iH~~~~~~~~~~~~~~~~~~~~~~~~  178 (307)
T 2f6k_A          106 VKTVQQALDQDG-ALGVTVPTNSR----GLYFGS--PVLERVYQELDARQAIVALHPNEPAILPKNVDIDLPVPLLGFFM  178 (307)
T ss_dssp             HHHHHHHHHTSC-CSEEEEESEET----TEETTC--GGGHHHHHHHHTTTCEEEEECCCCSCCCTTSSTTCCHHHHHHHH
T ss_pred             HHHHHHHHhccC-CcEEEEeccCC----CCCCCc--HhHHHHHHHHHHcCCeEEECCCCCccccccccccccchhccchH
Confidence            357777775 57 78999987431    122334  678899999999999999999865421     00     0  01


Q ss_pred             hHHHHHHHH-HHHHHHhCCCCcEEEEccCC
Q 019093          149 REKVFIDTI-LQPLIQRLPQLKVVMEHITT  177 (346)
Q Consensus       149 ~E~~av~~~-l~~~la~~~g~~lhi~HvSt  177 (346)
                      ....++.++ +...+.+++++++.+.|.+.
T Consensus       179 ~~~~~~~~l~~~~~~~~~P~l~~v~~H~gg  208 (307)
T 2f6k_A          179 DTTMTFINMLKYHFFEKYPNIKVIIPHAGA  208 (307)
T ss_dssp             HHHHHHHHHHHTTHHHHCTTCEEEESGGGT
T ss_pred             HHHHHHHHHHhcCccccCCCCeEEccCCCc
Confidence            122233332 11146788899999999964

>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824}

Probab=98.33  E-value=1.9e-05  Score=71.78  Aligned_cols=158  Identities=13%  Similarity=0.168  Sum_probs=92.9

Q ss_pred             HHHHHHH-HcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHc-CCcEEEecCCCCCCCChhhhHHHHHHHHHHH
Q 019093           83 DEIKLAR-KTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQ-NMPLLVHGEVTDPIVDIFDREKVFIDTILQP  160 (346)
Q Consensus        83 ~el~~l~-~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~-g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~  160 (346)
                      ++|.++. +.| +.|++.+.-     .. .  +. ..+.++++.++++ |+||++|+..+..    ..    +...+.. 
T Consensus       105 ~el~~~~~~~g-~~gi~~~g~-----~~-~--~~-~~~~~~~~~a~~~~~lpv~iH~~~~~~----~~----~~~~~~~-  165 (272)
T 3cjp_A          105 SYIEENIVNNK-LVGIGELTP-----AS-G--QI-KSLKPIFKYSMDSGSLPIWIHAFNPLV----LQ----DIKEIAE-  165 (272)
T ss_dssp             HHHHHHTTTTT-CSEEEEECC-----CT-T--CG-GGGHHHHHHHHHTTCCCEEECCSTTCC----HH----HHHHHHH-
T ss_pred             HHHHHHHHhcC-ceEEEecCC-----CC-C--cc-HHHHHHHHHHHhccCCcEEEeCCCCCc----cc----cHHHHHH-
Confidence            4566654 356 789987632     11 2  33 6789999999999 9999999986421    11    1112222 


Q ss_pred             HHHhCCCCcEEEEccCCHHHHHHHHccC-CCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcC
Q 019093          161 LIQRLPQLKVVMEHITTMDAVKFVESCK-EGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSG  239 (346)
Q Consensus       161 ~la~~~g~~lhi~HvSt~~~l~~i~~ak-g~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G  239 (346)
                      .+.++++.++.++|.....-.+.++.++ -.+++++++..                       .. ......+++.+. +
T Consensus       166 ~l~~~p~l~iv~~H~G~~~~~~~~~~~~~~~~~y~~~s~~-----------------------~~-~~~~~~~~~~~~-d  220 (272)
T 3cjp_A          166 LCKAFPKVPVILGHMGGSNWMTAVELAKEIQNLYLDTSAY-----------------------FS-TFVLKIVINELP-L  220 (272)
T ss_dssp             HHHHSTTSCEEEGGGGGGGHHHHHHHHHHCTTEEEECTTC-----------------------SC-HHHHHHHHHHST-T
T ss_pred             HHHHCCCceEEEECCCCccHHHHHHHHHhCCCEEEEeccc-----------------------cc-HHHHHHHHHhCC-C
Confidence            4677888999999998654333322221 12455555431                       11 123345566663 2


Q ss_pred             CccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHchhhhhhcCCC
Q 019093          240 SRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLP  304 (346)
Q Consensus       240 ~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~~~~l~~lv~~~s~nPAki~gl~  304 (346)
                        .++++||. |+..-              +.....+.   ....+-+.+.+++..|++|+||++
T Consensus       221 --ril~gSD~-P~~~~--------------~~~~~~~~---~~~l~~~~~~~i~~~Na~rl~~l~  265 (272)
T 3cjp_A          221 --KCIFGTDM-PFGDL--------------QLSIEAIK---KMSNDSYVANAVLGDNISRLLNIE  265 (272)
T ss_dssp             --TEECCCCT-TSSCH--------------HHHHHHHH---HHCSSHHHHHHHHTHHHHHHHTC-
T ss_pred             --eEEEeCCC-CCCCh--------------HHHHHHHH---hcCCCHHHHHHHHHHHHHHHhCcc
Confidence              33479996 77310              11111111   123478899999999999999995

>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12

Probab=98.32  E-value=6.5e-06  Score=75.04  Aligned_cols=231  Identities=15%  Similarity=0.059  Sum_probs=118.8

Q ss_pred             ccccceecCC-C-ccccccc-ccc-CCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCC---
Q 019093            8 PDDWHLHLRD-G-DLLKAVV-PHS-VSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTT---   80 (346)
Q Consensus         8 ~ID~HvH~r~-g-~~~ke~~-~s~-sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~---   80 (346)
                      ++|.|||+.. . ..+.+.+ ... ..|++++|.++.      +++..+...+.+ +..   -++..  ++++.|..   
T Consensus        13 ~~~~~~hl~~~~~~~~~~~~l~~~~~~GV~~~v~~~~------~~~~~~~~~~l~-~~~---p~i~~--~~G~hP~~~~~   80 (268)
T 1j6o_A           13 MVDTHAHLHFHQFDDDRNAVISSFEENNIEFVVNVGV------NLEDSKKSLDLS-KTS---DRIFC--SVGVHPHDAKE   80 (268)
T ss_dssp             EEEEEECTTSGGGTTTHHHHHHTTTTTTEEEEEEECS------SHHHHHHHHHHH-TTC---TTEEE--EECCCGGGGGG
T ss_pred             ccccccCCCChhhccCHHHHHHHHHHcCCCEEEEeCC------CHHHHHHHHHHH-HHC---CCEEE--EEeeccccccc
Confidence            6899999975 2 1222222 222 378988888752      123333333322 222   23332  33334421   


Q ss_pred             ----CHHHHHHHHHc------CCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhH
Q 019093           81 ----SPDEIKLARKT------GVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDRE  150 (346)
Q Consensus        81 ----~~~el~~l~~~------G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E  150 (346)
                          ..++|.++.+.      | -+|++.+..    .+.... +. ..+.+.++.++++|+||++|+.+..         
T Consensus        81 ~~~~~~~~l~~~~~~~~~~~iG-e~Gld~~~~----~~~~~~-q~-~~f~~~~~~a~~~~lPv~iH~~~~~---------  144 (268)
T 1j6o_A           81 VPEDFIEHLEKFAKDEKVVAIG-ETGLDFFRN----ISPAEV-QK-RVFVEQIELAGKLNLPLVVHIRDAY---------  144 (268)
T ss_dssp             CCTTHHHHHHHHTTSTTEEEEE-EEEEETTTC----SSCHHH-HH-HHHHHHHHHHHHHTCCEEEEEESCH---------
T ss_pred             cCHHHHHHHHHHhccCCEEEEE-ccccCCccc----CCChHH-HH-HHHHHHHHHHHHhCCCEEEEeCchH---------
Confidence                13455554432      2 245665431    111112 22 6788999999999999999998531         


Q ss_pred             HHHHHHHHHHHHHhCC--CCcEEEEccCC--HHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCCh
Q 019093          151 KVFIDTILQPLIQRLP--QLKVVMEHITT--MDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKRE  226 (346)
Q Consensus       151 ~~av~~~l~~~la~~~--g~~lhi~HvSt--~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~  226 (346)
                          ..+++ .+.++.  ..++.+ |.-+  .+.++.+.+   .++++.++... .+                    +..
T Consensus       145 ----~~~~~-il~~~p~~~~~~I~-H~~~g~~~~~~~~~~---~g~y~~~sg~~-~~--------------------~~~  194 (268)
T 1j6o_A          145 ----SEAYE-ILRTESLPEKRGVI-HAFSSDYEWAKKFID---LGFLLGIGGPV-TY--------------------PKN  194 (268)
T ss_dssp             ----HHHHH-HHHHSCCCSSCEEE-TTCCSCHHHHHHHHH---HTEEEEECGGG-GC--------------------TTC
T ss_pred             ----HHHHH-HHHhcCCCCCCEEE-EcCCCCHHHHHHHHH---CCCeEEecccc-cc--------------------cch
Confidence                12221 345566  778888 9753  333333322   24666665421 00                    011


Q ss_pred             hhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHH--hcCCHHHHHHHHchhhhhhcCCC
Q 019093          227 IHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFE--EMGALDKLEAFTSFNGPDFYGLP  304 (346)
Q Consensus       227 ~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~--~~~~l~~lv~~~s~nPAki~gl~  304 (346)
                      +.-..+.+.+-.+.  ++++||. |+......     .|-.+-...++.....+.  ...+.+++.+++..|++|+||+.
T Consensus       195 ~~l~~~i~~~~~dr--iL~eTD~-P~~~~~~~-----~g~~n~p~~~~~~~~~la~~~~~~~e~~~~i~~~Na~rlf~l~  266 (268)
T 1j6o_A          195 EALREVVKRVGLEY--IVLETDC-PFLPPQPF-----RGKRNEPKYLKYVVETISQVLGVPEAKVDEATTENARRIFLEV  266 (268)
T ss_dssp             HHHHHHHHHHCGGG--EEECCCB-TSCCCGGG-----TTSCCCGGGHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHhCChhh--EEEecCC-CCCCCccc-----CCCCCchHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHhCcc
Confidence            22223445442233  3479996 76432211     121122223444333332  24589999999999999999984

>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}

Probab=98.29  E-value=3.1e-05  Score=71.58  Aligned_cols=245  Identities=16%  Similarity=0.083  Sum_probs=117.6

Q ss_pred             ccccceecCC-Cc-ccccc-cccc-CCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCC---
Q 019093            8 PDDWHLHLRD-GD-LLKAV-VPHS-VSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTT---   80 (346)
Q Consensus         8 ~ID~HvH~r~-g~-~~ke~-~~s~-sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~---   80 (346)
                      +||.|+|+.. .. .+.+. +..+ ..||..++...      ++++..+...+.+++.......+..  ++++.|..   
T Consensus         3 ~iD~H~HL~~~~~~~d~~~vl~~a~~~gV~~~v~~g------~~~~~~~~~~~la~~~~~~~~~v~~--~~GiHP~~~~~   74 (287)
T 3rcm_A            3 LIDIGVNLTNSSFHDQQAAIVERALEAGVTQMLLTG------TSLAVSEQALELCQQLDASGAHLFA--TAGVHPHDAKA   74 (287)
T ss_dssp             EEEEEECTTCGGGTTCHHHHHHHHHHTTEEEEEECC------CSHHHHHHHHHHHHHHCTTSSSEEE--EECCCGGGGGG
T ss_pred             eEEEeecCCchhcccCHHHHHHHHHHcCCeEEEEec------CCHHHHHHHHHHHHhCCCCCceEEE--EEEECcCcccc
Confidence            7999999975 21 22222 2222 37999887753      2344444444444433210011333  33335421   


Q ss_pred             ----CHHHHHHHHHcCCeeEE-EEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHH
Q 019093           81 ----SPDEIKLARKTGVVFAV-KLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFID  155 (346)
Q Consensus        81 ----~~~el~~l~~~G~v~~~-Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~  155 (346)
                          ..++|.++.+.+.|+++ .+=+.+....+.... .. ..+.+.++.++++|+||++|+.+.             ..
T Consensus        75 ~~~~~~~~l~~l~~~~~vvaIGEiGLD~~~~~~~~~~-Q~-~~F~~ql~lA~e~~lPv~iH~r~a-------------~~  139 (287)
T 3rcm_A           75 WDTDSERQLRLLLSEPRVRAVGECGLDFNRDFSPRPL-QE-KALEAQLTLAAQLRLPVFLHERDA-------------SE  139 (287)
T ss_dssp             CCTTHHHHHHHHHTSTTEEEEEEEEEETTTCSSCHHH-HH-HHHHHHHHHHHHHTCCEEEEEESC-------------HH
T ss_pred             CCHHHHHHHHHHhcCCCeEEEEEeeeCCCcccCcHHH-HH-HHHHHHHHHHHHhCCCEEEEcCCc-------------HH
Confidence                23456666654334443 121111001111001 11 567888999999999999999974             12


Q ss_pred             HHHHHHHHhCCC---CcEEEEcc-C-CHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHH
Q 019093          156 TILQPLIQRLPQ---LKVVMEHI-T-TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQ  230 (346)
Q Consensus       156 ~~l~~~la~~~g---~~lhi~Hv-S-t~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~  230 (346)
                      .++  .+.+..+   .+. |.|. | +.+.++.+.+. |  ++..++.- +++                  +-|.++-| 
T Consensus       140 ~~l--~il~~~~~~~~~~-V~H~fsG~~e~a~~~l~~-G--~yis~~g~-i~~------------------~k~~~~l~-  193 (287)
T 3rcm_A          140 RLL--AILKDYRDHLTGA-VVHCFTGEREALFAYLDL-D--LHIGITGW-ICD------------------ERRGTHLH-  193 (287)
T ss_dssp             HHH--HHHHTTGGGCSCE-EECSCCCCHHHHHHHHHT-T--CEEEECGG-GGC------------------TTTCGGGH-
T ss_pred             HHH--HHHHHcCCCCCeE-EEEeCCCCHHHHHHHHHC-C--cEEEECch-hcc------------------ccCHHHHH-
Confidence            233  2222222   245 4476 3 44444433321 3  23333321 110                  00122222 


Q ss_pred             HHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHH-H-hcCCHHHHHHHHchhhhhhcCCCC
Q 019093          231 AVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVF-E-EMGALDKLEAFTSFNGPDFYGLPR  305 (346)
Q Consensus       231 aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~-~-~~~~l~~lv~~~s~nPAki~gl~~  305 (346)
                      .+.+.+-...  +++.||- |+....-.. ....|-.+-...++.+...+ . +..+.+++.+.+..|+.|+||++.
T Consensus       194 ~~v~~ip~dr--lLlETD~-P~l~p~~~~-~~~rg~~n~P~~l~~v~~~lA~~~g~s~eev~~~~~~N~~rlf~l~~  266 (287)
T 3rcm_A          194 PLVGNIPEGR--LMLESDA-PYLLPRSLR-PKPKSGRNEPAFLPEVLREVALHRGESAEHTAAHTTATARDFFQLPA  266 (287)
T ss_dssp             HHHTTSCTTS--EEECCCT-TSCCCTTCS-SCCTTCCCCGGGHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHTTCCC
T ss_pred             HHHHhcCCcc--EEEeccC-CccCccccc-cccCCCcCCHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHCCCh
Confidence            2333332222  3378994 664211000 00023333344566655433 2 245899999999999999999953

>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A

Probab=98.18  E-value=3.5e-05  Score=71.48  Aligned_cols=178  Identities=14%  Similarity=0.066  Sum_probs=102.0

Q ss_pred             HHHHHHHHHcCCeeEEEEeecCCccCCCC-CccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHH
Q 019093           82 PDEIKLARKTGVVFAVKLYPAGATTNSQD-GVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQP  160 (346)
Q Consensus        82 ~~el~~l~~~G~v~~~Kif~~~~~~~~~~-~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~  160 (346)
                      .++|.++.+.| ++|+|....+.  .+.. .+.+  ..+.+.++.++++|.++.+|+....+            ..+.. 
T Consensus        91 ~~~L~~l~~~g-v~Gir~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~glpv~ih~~~~~l------------~~l~~-  152 (303)
T 4do7_A           91 AERVAEWRGTK-LRGFRHQLQDE--ADVRAFVDD--ADFARGVAWLQANDYVYDVLVFERQL------------PDVQA-  152 (303)
T ss_dssp             HHHHTTCCSSC-EEEEECCGGGS--SCHHHHHHC--HHHHHHHHHHHHTTCEEEECCCGGGH------------HHHHH-
T ss_pred             HHHHHHHhhcC-ceEEEecCcCC--CCccccccC--HHHHHHHHHHHHCCCeEEEecCHHHH------------HHHHH-
Confidence            45666666556 89999765321  0101 2334  67899999999999999999986432            12221 


Q ss_pred             HHHhCCCCcEEEEccCCHH----------------HHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCC
Q 019093          161 LIQRLPQLKVVMEHITTMD----------------AVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLK  224 (346)
Q Consensus       161 ~la~~~g~~lhi~HvSt~~----------------~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR  224 (346)
                      .+.+++++++.|.|+..+.                .+..+.  +.-+|++.++--+.....+   . +  ..   .+|  
T Consensus       153 ll~~~P~l~iVi~H~G~p~~~~~~~~~~~~~~w~~~l~~la--~~~nv~~klSg~~~~~~~~---~-~--~~---~~~--  219 (303)
T 4do7_A          153 FCARHDAHWLVLDHAGKPALAEFDRDDTALARWRAALRELA--ALPHVVCKLSGLVTEADWR---R-G--LR---ASD--  219 (303)
T ss_dssp             HHHHCCSSCEEEGGGGCCCGGGCC---CHHHHHHHHHHHHH--TSTTEEEEECSCGGGSCTT---T-C--CC---HHH--
T ss_pred             HHHHCCCCCEEEeCCCCCCccccccccchHHHHHHHHHHHH--hCCCEEEEeCCcccccccc---c-c--cc---CCC--
Confidence            4677889999999998641                333333  2247888887533221100   0 0  00   000  


Q ss_pred             Chhh----HHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHchhhhhh
Q 019093          225 REIH----RQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDF  300 (346)
Q Consensus       225 ~~~d----~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~~~~l~~lv~~~s~nPAki  300 (346)
                       .++    -+.+.+.+  |.=.++.|||. ||..-.          .+.+..+..+-..+....+-+..-+++..|++|+
T Consensus       220 -~~~~~~~~~~~~~~~--G~dri~fgSD~-P~~~~~----------~~~~~~~~~~~~~~~~~l~~~~~~~i~~~Na~rl  285 (303)
T 4do7_A          220 -LRHIEQCLDAALDAF--GPQRLMFGSDW-PVCLLA----------ASYDEVASLVERWAESRLSAAERSALWGGTAARC  285 (303)
T ss_dssp             -HHHHHHHHHHHHHHH--CGGGEEECCCB-TGGGGT----------CCHHHHHHHHHHHHHHHCCHHHHHHHTTHHHHHH
T ss_pred             -HHHHHHHHHHHHHHh--CcccEEEeCCC-CCCcCc----------CCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence             122    12344554  33344479996 775221          0122223332221222357788899999999999


Q ss_pred             cCCC
Q 019093          301 YGLP  304 (346)
Q Consensus       301 ~gl~  304 (346)
                      ||++
T Consensus       286 ~~l~  289 (303)
T 4do7_A          286 YALP  289 (303)
T ss_dssp             TTCC
T ss_pred             hCCC
Confidence            9994

>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...

Probab=98.09  E-value=5.5e-05  Score=71.18  Aligned_cols=159  Identities=11%  Similarity=0.016  Sum_probs=78.6

Q ss_pred             HHHHHHHHHhHHcCCcEEEecC-CCCCCCChhhhHHHHHHHHHHHHHHhCCCC---cEEEEccC-CHHHHHHHHccC--C
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGE-VTDPIVDIFDREKVFIDTILQPLIQRLPQL---KVVMEHIT-TMDAVKFVESCK--E  189 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE-~~~~~~~~~~~E~~av~~~l~~~la~~~g~---~lhi~HvS-t~~~l~~i~~ak--g  189 (346)
                      ..+...++.++++|+||++|++ +..        +  +. ..+  .+.+..|.   ++.|.|+. +. +.+.++++.  |
T Consensus       148 ~~f~~q~~lA~~~glPv~iH~~~~~r--------~--a~-e~l--~iL~~~g~~~~~~~i~H~f~~~-~~e~a~~~~~~G  213 (330)
T 2ob3_A          148 LVLKAAARASLATGVPVTTHTAASQR--------D--GE-QQA--AIFESEGLSPSRVCIGHSDDTD-DLSYLTALAARG  213 (330)
T ss_dssp             HHHHHHHHHHHHHCCCEEEECCGGGT--------H--HH-HHH--HHHHHTTCCGGGEEECSGGGCC-CHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhCCeEEEECCCCCC--------C--HH-HHH--HHHHHcCcCcccEEEeCCCCCC-CHHHHHHHHhCC
Confidence            3577888999999999999996 221        1  11 223  12222344   55789985 32 234444332  5


Q ss_pred             CeeEEEccchhhcc----chhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCcc--EEeecCCCCCCccccccCC-C
Q 019093          190 GFVAATVTPQHLVL----NRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRK--FFLGTDSAPHERGRKECAC-G  262 (346)
Q Consensus       190 ~~vt~Et~ph~L~l----~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id--~~i~SDHaP~~~~~K~~~~-~  262 (346)
                      ..+...+.. -.++    ++.-+.+      .. .+|  ..+..+.|.++++.|-.|  + +.||- |+..... .++ +
T Consensus       214 ~~i~~~~~G-~~tf~~~~~~~~~~~------~~-~~~--~~~~~~~l~~~~~~~p~dril-leTD~-p~~l~~~-~~~~g  280 (330)
T 2ob3_A          214 YLIGLDHIP-YSAIGLEDNASASAL------LG-IRS--WQTRALLIKALIDQGYMKQIL-VSNDW-TFGFSSY-VTNIM  280 (330)
T ss_dssp             CEEEECCTT-CCCTTCTTCHHHHHH------HC-SSC--HHHHHHHHHHHHHTTCGGGEE-ECCCC-CSEECSS-STTHH
T ss_pred             CEEEeCCCc-ccccccccccccccc------cc-CCC--HHHHHHHHHHHHHhCCCCeEE-EeCCC-CCCcccc-cccCC
Confidence            444333201 0111    0000000      00 111  123344688888888777  4 78995 5411100 000 0


Q ss_pred             CC---Ccc-chhHHHHHHHHHHH-hcCCHHHHHHHHchhhhhhcC
Q 019093          263 CA---GIY-NAPVALSLYAKVFE-EMGALDKLEAFTSFNGPDFYG  302 (346)
Q Consensus       263 ~~---G~~-g~e~~lp~l~~~~~-~~~~l~~lv~~~s~nPAki~g  302 (346)
                      ..   ..| +.-..+.-+...+. +..+++++.+.++.||+|+||
T Consensus       281 ~~~~~n~pn~~~~~~~~~ia~l~~~G~~~eev~~~~t~N~~rlf~  325 (330)
T 2ob3_A          281 DVMDRVNPDGMAFIPLRVIPFLREKGVPQETLAGITVTNPARFLS  325 (330)
T ss_dssp             HHHHHHCTTGGGHHHHTHHHHHHHTTCCHHHHHHHHTHHHHHHHS
T ss_pred             CcccccCCCCcchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc
Confidence            00   011 22112222222222 335899999999999999998

>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}

Probab=97.85  E-value=0.00033  Score=64.79  Aligned_cols=24  Identities=13%  Similarity=0.223  Sum_probs=20.8

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCC
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVT  140 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~  140 (346)
                      ..+.+.++.++++|+||++|+.+.
T Consensus       127 ~~f~~ql~lA~~~~lPv~iH~r~a  150 (301)
T 2xio_A          127 KYFEKQFELSEQTKLPMFLHCRNS  150 (301)
T ss_dssp             HHHHHTHHHHHHHCCCEEEEEESC
T ss_pred             HHHHHHHHHHHHhCCcEEEEecCc
Confidence            467888899999999999999763

>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A

Probab=97.72  E-value=0.00045  Score=64.64  Aligned_cols=188  Identities=16%  Similarity=0.170  Sum_probs=99.7

Q ss_pred             HHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCC---CCh-------hhhHH-
Q 019093           83 DEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPI---VDI-------FDREK-  151 (346)
Q Consensus        83 ~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~---~~~-------~~~E~-  151 (346)
                      +||.++.+.| +.|+|+.+.+    .+..++|  ..++.+++.++++|++|++|+.+....   ...       ...|. 
T Consensus       131 ~el~~~~~~g-~~Gv~l~~~~----~~~~l~d--~~~~p~~~~~~e~~lpv~iH~~~~~~~~~~~~~~~~~~~~~p~~~~  203 (334)
T 2hbv_A          131 KEASRAVAAG-HLGIQIGNHL----GDKDLDD--ATLEAFLTHCANEDIPILVHPWDMMGGQRMKKWMLPWLVAMPAETQ  203 (334)
T ss_dssp             HHHHHHHHHT-CCCEEEESCB----TTBCTTS--HHHHHHHHHHHHTTCCEEEECCSCSCTTTTCSTTHHHHTHHHHHHH
T ss_pred             HHHHHHHHcC-CeEEEECCCC----CCCCCCc--HHHHHHHHHHHHCCCEEEECCCCCCCCcchhhhhhhhhhhcHHHHH
Confidence            5787777778 7899998642    1233444  789999999999999999999864211   110       11222 


Q ss_pred             HHHHHH-HHHHHHhCCC-CcEEEEccCC--HHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChh
Q 019093          152 VFIDTI-LQPLIQRLPQ-LKVVMEHITT--MDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREI  227 (346)
Q Consensus       152 ~av~~~-l~~~la~~~g-~~lhi~HvSt--~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~  227 (346)
                      .++.++ +...+.++++ +++.+.|.+.  +.-++.+...  .... +++...|.-....+.+   +-++. +-+. +..
T Consensus       204 ~~~~~l~~~~v~~~~P~~l~~v~~H~Gg~~p~~~~r~~~~--~~~~-~~~~~~~~~~~~~~~~---~~y~d-s~~~-~~~  275 (334)
T 2hbv_A          204 LAILSLILSGAFERIPKSLKICFGHGGGSFAFLLGRVDNA--WRHR-DIVREDCPRPPSEYVD---RFFVD-SAVF-NPG  275 (334)
T ss_dssp             HHHHHHHHTTGGGTSCTTCCEEESGGGTTHHHHHHHHHHH--HHHC-HHHHTTCCSCGGGGGG---GCEEE-CCCS-SHH
T ss_pred             HHHHHHHHcCchhhCCCcceEEeecccchHHHHHHHHHhh--hhcc-cccccccCCCHHHHHh---hhEEE-eccC-CHH
Confidence            233332 2223677888 9999999863  1112211110  0000 1100000001111111   11222 1122 233


Q ss_pred             hHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHchhhhhhcCCC
Q 019093          228 HRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLP  304 (346)
Q Consensus       228 d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~~~~l~~lv~~~s~nPAki~gl~  304 (346)
                      .-+.+.+.+-.+  .+++|||. ||....+.     +    .    ..+ .  ....+-++..+++..|++|+|||+
T Consensus       276 ~l~~~~~~~g~d--rilfGSD~-P~~~~~~~-----~----~----~~l-~--~~~l~~~~~~~i~~~NA~rl~~l~  333 (334)
T 2hbv_A          276 ALELLVSVMGED--RVMLGSDY-PFPLGEQK-----I----G----GLV-L--SSNLGESAKDKIISGNASKFFNIN  333 (334)
T ss_dssp             HHHHHHHHHCGG--GEECCCCB-TSTTSCSS-----T----T----HHH-H--TSSCCHHHHHHHHTHHHHHHHTCC
T ss_pred             HHHHHHHHhCcc--cEEEeCCC-CCCCCCcC-----H----h----hHh-h--hcCCCHHHHHHHHhHHHHHHhCCC
Confidence            444455555223  34479997 88543221     0    1    111 1  123477899999999999999984

>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A

Probab=97.70  E-value=0.00061  Score=62.70  Aligned_cols=216  Identities=14%  Similarity=0.132  Sum_probs=118.0

Q ss_pred             CceeEEEeCCCCCCC---CCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCC---CHHHHHHHHHcCCeeEEEEeecC
Q 019093           30 SHYGRAIVMPNLKPP---ITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTT---SPDEIKLARKTGVVFAVKLYPAG  103 (346)
Q Consensus        30 GGvTtvv~mPnt~p~---~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~---~~~el~~l~~~G~v~~~Kif~~~  103 (346)
                      .||+..|.++...+.   .+|..    ..+.+++ ..  -.|...+++  .+..   ..+||+++.+.| +.|+|+++.+
T Consensus        59 ~GV~~~V~~~~~~~~~~~~~N~~----~~~~~~~-~p--~r~~~~~~v--~p~~~~~a~~eL~~~~~~g-~~Gi~~~~~~  128 (291)
T 3irs_A           59 AGIEQGVCVGRNSSVLGSVSNAD----VAAVAKA-YP--DKFHPVGSI--EAATRKEAMAQMQEILDLG-IRIVNLEPGV  128 (291)
T ss_dssp             TTCCEEEEECCEETTTEECCHHH----HHHHHHH-ST--TTEEEEEEC--CCSSHHHHHHHHHHHHHTT-CCCEEECGGG
T ss_pred             CCCCEEEEcCCCccccccccHHH----HHHHHHH-CC--CcEEEEEec--CccCHHHHHHHHHHHHhCC-CeEEEEeCCC
Confidence            699988887643221   22322    2222222 22  135555554  5532   235777766678 7899998643


Q ss_pred             CccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHH
Q 019093          104 ATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKF  183 (346)
Q Consensus       104 ~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~  183 (346)
                      .  ..+..+++  ..++.+++.++++|++|.+|+.+... ..........+..    .+.+++++++.+.|...+..-++
T Consensus       129 ~--~~~~~~~d--~~~~~~~~~a~e~glpv~iH~~~~~~-~~~~~~~p~~~~~----v~~~~P~l~ivl~H~G~~~~~~~  199 (291)
T 3irs_A          129 W--ATPMHVDD--RRLYPLYAFCEDNGIPVIMMTGGNAG-PDITYTNPEHIDR----VLGDFPDLTVVSSHGNWPWVQEI  199 (291)
T ss_dssp             S--SSCCCTTC--GGGHHHHHHHHHTTCCEEEECSSSCS-SSGGGGCHHHHHH----HHHHCTTCCEEEEGGGTTCHHHH
T ss_pred             C--CCCCCCCC--HHHHHHHHHHHHcCCeEEEeCCCCCC-CCCccCCHHHHHH----HHHHCCCCEEEeecCCcccHHHH
Confidence            1  11222344  67899999999999999999987521 0111111112222    46788999999999876533333


Q ss_pred             HHccC-CCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCC
Q 019093          184 VESCK-EGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACG  262 (346)
Q Consensus       184 i~~ak-g~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~  262 (346)
                      +..++ ..+++++++-- +             +.   .|   ..++-..+++.+-.+.| + +|||. ||..-       
T Consensus       200 ~~l~~~~~nvy~~~Sg~-~-------------~~---~~---~~~~~~~~~~~~g~drl-l-fgSD~-P~~~~-------  249 (291)
T 3irs_A          200 IHVAFRRPNLYLSPDMY-L-------------YN---LP---GHADFIQAANSFLADRM-L-FGTAY-PMCPL-------  249 (291)
T ss_dssp             HHHHHHCTTEEEECGGG-G-------------SS---ST---THHHHHHHHTTGGGGTB-C-CCCCB-TSSCH-------
T ss_pred             HHHHhHCCCeEecHHHH-h-------------cc---CC---CHHHHHHHHHHhCcceE-E-EecCC-CCCCH-------
Confidence            33221 23566665431 0             00   01   01121123333333333 3 68885 77421       


Q ss_pred             CCCccchhHHHHHHHHHHHh-cCCHHHHHHHHchhhhhhcCCCC
Q 019093          263 CAGIYNAPVALSLYAKVFEE-MGALDKLEAFTSFNGPDFYGLPR  305 (346)
Q Consensus       263 ~~G~~g~e~~lp~l~~~~~~-~~~l~~lv~~~s~nPAki~gl~~  305 (346)
                             +.    ....+.+ ..+.+...+++..|++|+||++.
T Consensus       250 -------~~----~~~~~~~l~l~~e~~~~i~~~NA~rl~~~~~  282 (291)
T 3irs_A          250 -------KE----YTEWFLTLPIKPDAMEKILHGNAERLLAQAG  282 (291)
T ss_dssp             -------HH----HHHHHHTSSCCHHHHHHHHTHHHHHHHHHSC
T ss_pred             -------HH----HHHHHHHCCCCHHHHHHHHHHHHHHHhCccc
Confidence                   11    1222222 34788999999999999999853

>3ij6_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structure initiative; 2.00A {Lactobacillus acidophilus}

Probab=97.68  E-value=0.0043  Score=57.64  Aligned_cols=175  Identities=13%  Similarity=0.136  Sum_probs=99.2

Q ss_pred             HHHHHHHHH-cCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCC----h-hhhH-HHHH
Q 019093           82 PDEIKLARK-TGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVD----I-FDRE-KVFI  154 (346)
Q Consensus        82 ~~el~~l~~-~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~----~-~~~E-~~av  154 (346)
                      .+||+++++ .| +.|+|+++..    .+..+.|  ..++.+++.++++|.+|.+|+.......+    . ...| ..++
T Consensus       113 ~~el~r~~~~~G-~~Gv~l~~~~----~~~~l~d--~~~~p~~~~~~e~g~pv~iH~g~~~~~p~~~~~~~~~~~~~~~~  185 (312)
T 3ij6_A          113 CKVISSIKDDEN-LVGAQIFTRH----LGKSIAD--KEFRPVLAQAAKLHVPLWMHPVFDARKPDNNLVFSWEYELSQAM  185 (312)
T ss_dssp             HHHHHHHHHCTT-EEEEEEESEE----TTEETTS--TTTHHHHHHHHHTTCCEEEECCCCTTSSSCCTTTHHHHHHHHHH
T ss_pred             HHHHHHHHHhCC-CceEeccCCC----CCCCCCC--ccHHHHHHHHHHcCCeEEEcCCCCCCCCCcccccccHHHHHHHH
Confidence            357888875 57 8899998642    1223444  67899999999999999999975422110    0 1112 2233


Q ss_pred             HHHH-HHHHHhCCCCcEEEEccCC--HHHHHHHHcc-C------CCeeEEEccchhhccchhhhccCCCCCceEEeCCCC
Q 019093          155 DTIL-QPLIQRLPQLKVVMEHITT--MDAVKFVESC-K------EGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLK  224 (346)
Q Consensus       155 ~~~l-~~~la~~~g~~lhi~HvSt--~~~l~~i~~a-k------g~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR  224 (346)
                      .+++ ...+.+++++|+.+.|...  +--++.+... +      -.+++++|+.                        +-
T Consensus       186 ~~li~~gv~~rfP~Lkii~~H~Gg~~P~~~~r~~~~~~~~~~~~~~nvy~dts~------------------------~~  241 (312)
T 3ij6_A          186 LQLVQSDLFQDYPNLKILVHHAGAMVPFFSGRIDHILDEKHAQDFKKFYVDTAI------------------------LG  241 (312)
T ss_dssp             HHHHHTTHHHHCTTCCEEESGGGTTTTTSHHHHHHHSCHHHHHHGGGCEEECCS------------------------SS
T ss_pred             HHHHHcChHhhCCCCeEEecCCcccHHHHHHHHHHhcccchHHHcCeEEEeCCC------------------------CC
Confidence            3322 2257899999999999873  2222222210 0      0123333321                        01


Q ss_pred             ChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHh-cCCHHHHHHHHchhhhhhcCC
Q 019093          225 REIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEE-MGALDKLEAFTSFNGPDFYGL  303 (346)
Q Consensus       225 ~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~-~~~l~~lv~~~s~nPAki~gl  303 (346)
                      ++..-..+.+.+-.+  .+++|||. ||...       +.|.  .+    ...+.+.+ ..+-++..+++..|.+|+||-
T Consensus       242 ~~~~l~~~~~~~g~d--rilfgSD~-P~~~~-------p~~~--~~----~~~~~l~~l~l~~~~~~~i~~~NA~rl~~~  305 (312)
T 3ij6_A          242 NTPALQLAIDYYGID--HVLFGTDA-PFAVM-------PSGA--DQ----IITQAINDLTISDKDKQKIFHDNYYSLIKE  305 (312)
T ss_dssp             CHHHHHHHHHHHCGG--GEECCCCB-TSSST-------TTCS--HH----HHHHHHHTSSSCHHHHHHHHTHHHHHHHCC
T ss_pred             CHHHHHHHHHhCCCC--eEEEeCCC-CCCcC-------CCcc--hH----HHHHHHHHcCCCHHHHHHHHHHHHHHHHhC
Confidence            223344556666323  34479996 87520       0121  11    12222222 347789999999999999985

>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}

Probab=97.64  E-value=0.00044  Score=64.61  Aligned_cols=198  Identities=19%  Similarity=0.181  Sum_probs=105.6

Q ss_pred             cEEEEEEEEeCCCC---CHHHHHHHHH-cCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCC
Q 019093           67 NFTPLMTLYLTDTT---SPDEIKLARK-TGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDP  142 (346)
Q Consensus        67 d~~~~~~~~~~~~~---~~~el~~l~~-~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~  142 (346)
                      .|..++++  .+..   ..+||.++.+ .| +.|+|+.+.+    .+..++|  ..++.+++.++++|++|++|+.+...
T Consensus       110 r~~~~~~l--~~~~~~~a~~el~~~~~~~g-~~Gv~l~~~~----~~~~l~d--~~~~~~~~~~~e~~lpv~iH~~~~~~  180 (336)
T 2wm1_A          110 RFVGLGTL--PMQAPELAVKEMERCVKELG-FPGVQIGTHV----NEWDLNA--QELFPVYAAAERLKCSLFVHPWDMQM  180 (336)
T ss_dssp             TEEEEECC--CTTSHHHHHHHHHHHHHTSC-CSEEEEESEE----TTEETTC--GGGHHHHHHHHHHTCEEEEECCSCCC
T ss_pred             ceeEEEeC--CCcCHHHHHHHHHHHHHccC-CeEEEECCcC----CCCCCCC--ccHHHHHHHHHHcCCEEEECCCCCCc
Confidence            36555444  4432   2357888775 57 7899987642    1223444  67899999999999999999986421


Q ss_pred             C---CC-h------hhhHH-HHHHHH-HHHHHHhCCCCcEEEEccCC--HHHHHHHHc-cCCC-ee---EEEccchhhcc
Q 019093          143 I---VD-I------FDREK-VFIDTI-LQPLIQRLPQLKVVMEHITT--MDAVKFVES-CKEG-FV---AATVTPQHLVL  203 (346)
Q Consensus       143 ~---~~-~------~~~E~-~av~~~-l~~~la~~~g~~lhi~HvSt--~~~l~~i~~-akg~-~v---t~Et~ph~L~l  203 (346)
                      .   .. .      ...|. .++.++ +...+.+++++++.+.|.+.  +.-++.+.. .+.. .+   .....|     
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~P~l~~v~~H~Gg~~p~~~~r~~~~~~~~~~~~~~~l~~~p-----  255 (336)
T 2wm1_A          181 DGRMAKYWLPWLVGMPAETTIAICSMIMGGVFEKFPKLKVCFAHGGGAFPFTVGRISHGFSMRPDLCAQDNPMNP-----  255 (336)
T ss_dssp             SGGGSSTTHHHHTHHHHHHHHHHHHHHHTTHHHHCTTCCEEESGGGTTHHHHHHHHHHHHHHCHHHHSSSCCSCG-----
T ss_pred             cccccccchHHHhccHHHHHHHHHHHHHcCchhhCCCCeEehhcccchHHHHHHHHHhhhhhChhhhhccCCCCH-----
Confidence            1   01 0      11122 222221 21246788999999999862  111222211 0000 00   001122     


Q ss_pred             chhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHH--
Q 019093          204 NRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFE--  281 (346)
Q Consensus       204 ~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~--  281 (346)
                        +.+.+   +-++. +.+ -+...-+.+.+.+-.+.|  ++|||. ||....+.     +    .        ..+.  
T Consensus       256 --~~~~~---~~~~d-s~~-~~~~~l~~~i~~~g~dri--lfGSD~-P~~~~~~~-----~----~--------~~l~~~  308 (336)
T 2wm1_A          256 --KKYLG---SFYTD-ALV-HDPLSLKLLTDVIGKDKV--ILGTDY-PFPLGELE-----P----G--------KLIESM  308 (336)
T ss_dssp             --GGGTT---SSEEE-CCC-CSHHHHHHHHHHHCTTSE--ECCCCB-TSTTSCSS-----T----T--------HHHHTC
T ss_pred             --HHHHH---hhEEE-ecc-cCHHHHHHHHHHhCCccE--EEeCCC-CCCcCCcC-----H----H--------HHHHhc
Confidence              11111   11222 222 223344455566633444  379997 88533221     0    1        1122  


Q ss_pred             hcCCHHHHHHHHchhhhhhcCCCC
Q 019093          282 EMGALDKLEAFTSFNGPDFYGLPR  305 (346)
Q Consensus       282 ~~~~l~~lv~~~s~nPAki~gl~~  305 (346)
                      ...+-++..+++..|++|+||++.
T Consensus       309 ~~l~~~~~~~i~~~NA~rl~~l~~  332 (336)
T 2wm1_A          309 EEFDEETKNKLKAGNALAFLGLER  332 (336)
T ss_dssp             TTSCHHHHHHHHTHHHHHHHTCCC
T ss_pred             cCCCHHHHHHHHHHHHHHHhCcCc
Confidence            234678899999999999999953

>4inf_A Metal-dependent hydrolase; amidohydrolase, metal binding site, enzyme functi initiative, EFI; 1.48A {Novosphingobium aromaticivorans} PDB: 4ing_A*

Probab=97.57  E-value=0.0039  Score=59.50  Aligned_cols=101  Identities=16%  Similarity=0.312  Sum_probs=65.6

Q ss_pred             cEEEEEEEEeCCCC---CHHHHHHHHHc-CCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCC
Q 019093           67 NFTPLMTLYLTDTT---SPDEIKLARKT-GVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDP  142 (346)
Q Consensus        67 d~~~~~~~~~~~~~---~~~el~~l~~~-G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~  142 (346)
                      .|..++++  .+..   ..+||+++++. | +.|+|+++..    .+..++|  ..++.+++.++++|.+|++|+.....
T Consensus       146 Rf~g~a~v--~~~~~~~a~~EL~r~~~~~G-~~Gv~l~~~~----~g~~l~d--~~~~pi~~~~~e~g~pV~iH~g~~~~  216 (373)
T 4inf_A          146 RFIGMGTV--APQDPEWSAREIHRGARELG-FKGIQINSHT----QGRYLDE--EFFDPIFRALVEVDQPLYIHPATSPD  216 (373)
T ss_dssp             TEEECBCC--CTTSHHHHHHHHHHHHHTSC-CCCEEECSCB----TTBCTTS--GGGHHHHHHHHHHTCCEEECCCCCCT
T ss_pred             EEEEEEec--CCCCHHHHHHHHHHHHhhcC-ceEEEECCCC----CCCCCCC--cchHHHHHHHHHcCCeEEECCCCCCc
Confidence            46655554  4432   13578888875 8 7899998642    2233444  67899999999999999999997642


Q ss_pred             CCC------------h-hhhHH-HHHHHHH-HHHHHhCCCCcEEEEccC
Q 019093          143 IVD------------I-FDREK-VFIDTIL-QPLIQRLPQLKVVMEHIT  176 (346)
Q Consensus       143 ~~~------------~-~~~E~-~av~~~l-~~~la~~~g~~lhi~HvS  176 (346)
                      ...            + ...|. .++.+++ .-.+.+++++|+.+.|..
T Consensus       217 ~~~~p~~~~~~~~~~~g~~~et~~~~~~Li~~gv~~rfP~LkiilaH~G  265 (373)
T 4inf_A          217 SMIDPMLEAGLDGAIFGFGVETGMHLLRLITIGIFDKYPSLQIMVGHMG  265 (373)
T ss_dssp             TTCHHHHHHTCSSTTTHHHHHHHHHHHHHHHHTHHHHCTTCCEEECHHH
T ss_pred             cccccccccccchhhhhhHHHHHHHHHHHHHcCchhhCcCCeEEEeccc
Confidence            110            0 11232 2333332 224689999999999986

>4dzi_A Putative TIM-barrel metal-dependent hydrolase; amidohydrolase, bimetal binding site, enzyme FUNC initiative, EFI; HET: SO4; 1.60A {Mycobacterium avium subsp}

Probab=97.45  E-value=0.0004  Score=67.60  Aligned_cols=241  Identities=15%  Similarity=0.168  Sum_probs=126.2

Q ss_pred             CceeEEEeCCCCCCC-----CCcH----HHHHHHHHHHHhhCC-CCc--cEEEEEEEEeCCC---CCHHHHHHHHHcCCe
Q 019093           30 SHYGRAIVMPNLKPP-----ITTT----AAAVAYRESILKALP-ASS--NFTPLMTLYLTDT---TSPDEIKLARKTGVV   94 (346)
Q Consensus        30 GGvTtvv~mPnt~p~-----~~~~----~~~~~~~~~~~~~~~-~~v--d~~~~~~~~~~~~---~~~~el~~l~~~G~v   94 (346)
                      .||...|..|+....     ..++    +....+.+.+.+... ..-  +|...+.+  ...   ...+||+++++.| +
T Consensus       113 ~GId~~Vl~p~~~~~~~~~~~~d~e~a~~~~r~~Nd~lae~~~~~~P~~Rf~g~a~v--~~~d~~~a~~EL~r~~~~G-~  189 (423)
T 4dzi_A          113 QDIETAFMLPTFGCGVEEALKHDIEATMASVHAFNLWLDEDWGFDRPDHRIIAAPIV--SLADPTRAVEEVDFVLARG-A  189 (423)
T ss_dssp             HTEEEEEEECSGGGGHHHHTTTCHHHHHHHHHHHHHHHHHHTCSSCTTCCEEECCBC--CCSSHHHHHHHHHHHHHTT-C
T ss_pred             cCCcEEEECCCchhhccccccCCHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEEeC--CccCHHHHHHHHHHHHHcC-C
Confidence            699988887754211     1222    233444555444322 112  46554444  321   1245888888888 7


Q ss_pred             eEEEEeecCCccC-CCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCC-------C----------Chh------hhH
Q 019093           95 FAVKLYPAGATTN-SQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPI-------V----------DIF------DRE  150 (346)
Q Consensus        95 ~~~Kif~~~~~~~-~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~-------~----------~~~------~~E  150 (346)
                      .|+|+++....+. ++..+.|  ..++.+++.++++|.+|++|+.+....       .          ...      ..+
T Consensus       190 ~Gv~l~p~~~~~~~g~~~l~d--~~~~pl~~~~~elg~pV~iH~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (423)
T 4dzi_A          190 KLVLVRPAPVPGLVKPRSLGD--RSHDPVWARLAEAGVPVGFHLSDSGYLHIAAAWGGKSTFEGFGAKDPLDQVLLDDRA  267 (423)
T ss_dssp             SCEECCSSCBCCSSSCBCTTC--GGGHHHHHHHHHHTCCEEEECCCCSTHHHHHHTTCC-------CCCHHHHHHHTTHH
T ss_pred             eEEEEecCCCCCCCCCCCCCC--ccHHHHHHHHHhcCCeEEEeCCCCCccccccccccccccccccccchhHHHhccchH
Confidence            8999986432111 1223444  678999999999999999999975321       0          000      111


Q ss_pred             H-HHHHHHH-HHHHHhCCCCcEEEEccCC---HHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCC
Q 019093          151 K-VFIDTIL-QPLIQRLPQLKVVMEHITT---MDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKR  225 (346)
Q Consensus       151 ~-~av~~~l-~~~la~~~g~~lhi~HvSt---~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~  225 (346)
                      . .++.+++ .-.+.+++++|+.+.|...   +.-++.+...-      +..|..+--..++|.+    .++.+.| . .
T Consensus       268 ~~~a~~~Li~sGvf~RfP~Lkiil~h~Gg~wlP~~l~Rld~~~------~~~~~~~~~~Pse~~r----~n~y~t~-~-~  335 (423)
T 4dzi_A          268 IHDTMASMIVHGVFTRHPKLKAVSIENGSYFVHRLIKRLKKAA------NTQPQYFPEDPVEQLR----NNVWIAP-Y-Y  335 (423)
T ss_dssp             HHHHHHHHHHTTHHHHCTTCCEEEESSCSTHHHHHHHHHHHHH------HHCGGGCSSCHHHHHH----HHEEECC-C-T
T ss_pred             HHHHHHHHHHcCchhhCCCCeEEEeCCCcchHHHHHHHHHHHH------HhCccccCCCHHHHHh----hCeEEee-c-C
Confidence            1 1232222 1146799999999999984   33344333210      0011111112222221    1233343 3 2


Q ss_pred             hhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHchhhhhhcCCCC
Q 019093          226 EIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLPR  305 (346)
Q Consensus       226 ~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~~~~l~~lv~~~s~nPAki~gl~~  305 (346)
                      ++.-..+.+.+-.+.|  ..|||. ||......     +    .+.     +..+ ...+-++..+++..|++|+|||+.
T Consensus       336 ~~~l~~~~~~~G~dri--lfgSDy-P~~~~~~~-----~----~~~-----~~~l-~~l~~~~~~~I~~~NA~rl~~l~~  397 (423)
T 4dzi_A          336 EDDLPELARVIGVDKI--LFGSDW-PHGEGLAS-----P----VSF-----TAEL-KGFSESDIRKIMRDNALDLLGVQV  397 (423)
T ss_dssp             TSCHHHHHHHHCGGGB--CCCCCB-TSTTSCSS-----G----GGG-----GGGC-TTSCHHHHHHHHTHHHHHHHC---
T ss_pred             hHHHHHHHHHcCcceE--EEecCC-CCccCccC-----H----HHH-----HHHh-cCCCHHHHHHHHHHHHHHHHCCCc
Confidence            3445567777743343  369997 88532110     0    010     0000 123667888999999999999953

>3nur_A Amidohydrolase; TIM barrel; 1.75A {Staphylococcus aureus}

Probab=97.31  E-value=0.013  Score=55.48  Aligned_cols=197  Identities=15%  Similarity=0.191  Sum_probs=104.5

Q ss_pred             cEEEEEEEEeCCCC---CHHHHHHHH-HcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCC
Q 019093           67 NFTPLMTLYLTDTT---SPDEIKLAR-KTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDP  142 (346)
Q Consensus        67 d~~~~~~~~~~~~~---~~~el~~l~-~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~  142 (346)
                      .|...+++  .+..   ..+||++++ +.| +.|+|+++..    .+..++|  ..++.+++.++++|.+|++|+.....
T Consensus       128 Rf~g~a~v--~~~~~~~a~~El~r~~~~~G-~~Gv~l~~~~----~~~~~~d--~~~~p~~~~~~e~g~pV~iH~g~~~~  198 (357)
T 3nur_A          128 RFVGFATL--PINEPEAAAREFERCINDLG-FKGALIMGRA----QDGFLDQ--DKYDIIFKTAENLDVPIYLHPAPVNS  198 (357)
T ss_dssp             TEEECBCC--CTTSHHHHHHHHHHHHHTTC-CCCEEEESCB----TTBCTTS--GGGHHHHHHHHHHTCCEEEECCCCCH
T ss_pred             EEEEEEeC--CCCCHHHHHHHHHHHHhhcC-ceEEEeCCCC----CCCCCCC--ccHHHHHHHHHhcCCeEEEecCCCCc
Confidence            46655554  3321   235788865 467 7899998532    1223444  67899999999999999999987421


Q ss_pred             C-------CCh--------------hhhHH-HHHHHH-HHHHHHhCCCCcEEEEccCC--HHHHHHHHccCCCeeEEEcc
Q 019093          143 I-------VDI--------------FDREK-VFIDTI-LQPLIQRLPQLKVVMEHITT--MDAVKFVESCKEGFVAATVT  197 (346)
Q Consensus       143 ~-------~~~--------------~~~E~-~av~~~-l~~~la~~~g~~lhi~HvSt--~~~l~~i~~akg~~vt~Et~  197 (346)
                      .       ...              ...|. .++.++ +.-.+.+++++|+.+.|...  +--++.+...-        .
T Consensus       199 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~t~~~~~~li~~gv~~rfP~LkiilaH~Gg~~P~~~~rld~~~--------~  270 (357)
T 3nur_A          199 DIYQSYYKGNYPEVTAATFACFGYGWHIDVGIHAIHLVLSGIFDRYPKLNMIIGHWGEFIPFFLERMDEAL--------F  270 (357)
T ss_dssp             HHHHHHTCCSSCHHHHHHHHTTTTHHHHHHHHHHHHHHHTTHHHHSTTCCEEECGGGTTGGGGHHHHHHHS--------C
T ss_pred             cccccccccCcccchhhhhhhhhhchhHHHHHHHHHHHHcCchhhCCCCeEEEecccccHHHHHHHHHhhh--------c
Confidence            0       000              00121 112121 22246899999999999872  33333333210        0


Q ss_pred             chhhccchhhhccCCCCCceEEeCC-CCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHH
Q 019093          198 PQHLVLNRNALFQGGLRPHNYCLPV-LKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLY  276 (346)
Q Consensus       198 ph~L~l~~~~~~~~~~~~~~k~~PP-LR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l  276 (346)
                      ...|--..+.|.+    ..+.+.+. .-+...-+.+.+.+-.+.|  +++||. ||..-+.              .    
T Consensus       271 ~~~l~~~ps~~~~----~nvy~~~sg~~~~~~l~~~~~~~g~dri--lfgSD~-P~~~~~~--------------~----  325 (357)
T 3nur_A          271 AEHLNHSVSYYFK----NSFYITPSGMLTKPQFDLVKKEVGIDRI--LYAADY-PYIEPEK--------------L----  325 (357)
T ss_dssp             CTTSSSCHHHHHH----HSEEECCTTCCCHHHHHHHHHHHCGGGB--CBCCCT-TTCCCTT--------------H----
T ss_pred             cccccCCHHHHHH----hceeeecccCCCHHHHHHHHHHcCCceE--EEeCCC-CCCCchH--------------H----
Confidence            0011111111111    12222221 1123344455666633343  369997 8853211              0    


Q ss_pred             HHHHHh-cCCHHHHHHHHchhhhhhcCCCC
Q 019093          277 AKVFEE-MGALDKLEAFTSFNGPDFYGLPR  305 (346)
Q Consensus       277 ~~~~~~-~~~l~~lv~~~s~nPAki~gl~~  305 (346)
                      ...+.. ..+-++..+++..|++|+|||+.
T Consensus       326 ~~~~~~~~l~~~~~~~i~~~NA~rl~~l~~  355 (357)
T 3nur_A          326 GVFLDELGLTDEEKEKISYTNGAKLLGLSS  355 (357)
T ss_dssp             HHHTTSSCCCHHHHHHHHTHHHHHHHTC--
T ss_pred             HHHHHHcCCCHHHHHHHHhHHHHHHhCCCC
Confidence            111111 24678889999999999999953

>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*

Probab=96.89  E-value=0.023  Score=53.91  Aligned_cols=152  Identities=13%  Similarity=0.116  Sum_probs=77.5

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCC---CcEEEEccCCHHHHHHHHcc--CCCe
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQ---LKVVMEHITTMDAVKFVESC--KEGF  191 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g---~~lhi~HvSt~~~l~~i~~a--kg~~  191 (346)
                      ..++...+.++++|+||++|+.....     .-|.  + ++    +.+ .|   -++.|.|+.-....+..++.  +|..
T Consensus       193 k~frA~a~aa~etG~Pv~iHt~~~~~-----~~e~--l-~i----L~e-eG~~~~~vvi~H~~~~~d~~~~~~~l~~G~y  259 (360)
T 3tn4_A          193 MFFRAAARAQKETGAVIITHTQEGTM-----GPEQ--A-AY----LLE-HGADPKKIVIGHMCDNTDPDYHRKTLAYGVY  259 (360)
T ss_dssp             HHHHHHHHHHHHHCCEEEEECSTTCC-----HHHH--H-HH----HHH-TTCCGGGEEECCGGGCCCHHHHHHHHTTTCE
T ss_pred             HHHHHHHHHHHHhCCcEEEEcCcccC-----CHHH--H-HH----HHH-cCCCCCceEEEcCCCCCCHHHHHHHHHcCCE
Confidence            46778888999999999999987532     0111  1 12    222 23   36889996211122322221  2544


Q ss_pred             eEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCcc-EEeecCCC------CCCccccccC-CCC
Q 019093          192 VAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRK-FFLGTDSA------PHERGRKECA-CGC  263 (346)
Q Consensus       192 vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id-~~i~SDHa------P~~~~~K~~~-~~~  263 (346)
                      +..+..              |... +.-.||  +.+..+.|.+.++.|-.| ++|++|-.      |+..-..-.+ ...
T Consensus       260 l~fD~i--------------G~~~-~~~~p~--d~~r~~~l~~lv~~g~~drILLstDa~~~~~~~py~~p~p~r~~~~~  322 (360)
T 3tn4_A          260 IAFDRF--------------GIQG-MVGAPT--DEERVRTLLALLRDGYEKQIMLSHDTVNVWLGRPFTLPEPFAEMMKN  322 (360)
T ss_dssp             EEECCT--------------TCCC-STTCCC--HHHHHHHHHHHHHTTCGGGEEECCCCEEEESSSCCCCCHHHHHHTTT
T ss_pred             EEEccc--------------cccc-ccCCCC--hHHHHHHHHHHHHhcCcceEEEecCCCcccccCCCCCcccccccCCC
Confidence            433321              1000 101121  233345677778888776 44677731      4432111000 011


Q ss_pred             CCccch-hHHHHHHHHHHHhcC-CHHHHHHHHchhhhhhcC
Q 019093          264 AGIYNA-PVALSLYAKVFEEMG-ALDKLEAFTSFNGPDFYG  302 (346)
Q Consensus       264 ~G~~g~-e~~lp~l~~~~~~~~-~l~~lv~~~s~nPAki~g  302 (346)
                      +|..-+ ...+|.|    .++| +.+++.+++..||+|+|-
T Consensus       323 ~~y~~i~~~~ip~L----~~~Gvs~e~I~~i~~~NP~rlfs  359 (360)
T 3tn4_A          323 WHVEHLFVNIIPAL----KNEGIRDEVLEQMFIGNPAALFS  359 (360)
T ss_dssp             CSTTHHHHTHHHHH----HHTTCCHHHHHHHHTHHHHHHHC
T ss_pred             CCchhHHHHHHHHH----HHcCCCHHHHHHHHHHhHHHHhc
Confidence            222211 2334433    3444 899999999999999983

>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}

Probab=96.82  E-value=0.032  Score=52.13  Aligned_cols=40  Identities=15%  Similarity=0.006  Sum_probs=28.7

Q ss_pred             CccchhHHHHHHHHHHHh--cCCHHHHHHHHchhhhhhcCCC
Q 019093          265 GIYNAPVALSLYAKVFEE--MGALDKLEAFTSFNGPDFYGLP  304 (346)
Q Consensus       265 G~~g~e~~lp~l~~~~~~--~~~l~~lv~~~s~nPAki~gl~  304 (346)
                      |-..-...++.+...+.+  ..+++++.+.+..|..++|++.
T Consensus       282 g~rNeP~~v~~v~~~iA~l~g~~~eeva~~t~~Na~~lF~~~  323 (325)
T 3ipw_A          282 QRRNEPSNIIDIAIIMSSIKHISLFEFVNKVYSNSMNMYFPT  323 (325)
T ss_dssp             TTCCCGGGHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHSCC
T ss_pred             CCcCcHHHHHHHHHHHHHhhCcCHHHHHHHHHHHHHHHhCcC
Confidence            334445567766544332  3489999999999999999984

>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}

Probab=96.72  E-value=0.013  Score=55.77  Aligned_cols=158  Identities=8%  Similarity=0.029  Sum_probs=86.7

Q ss_pred             HHHHHHHHHhHHc-CCcEEEec-CCCCCCCChhhhHHHHHHHHHHHHHHhCCCC---cEEEEccC-CHHHHHHHHcc-C-
Q 019093          117 GKCVHVLEEMVEQ-NMPLLVHG-EVTDPIVDIFDREKVFIDTILQPLIQRLPQL---KVVMEHIT-TMDAVKFVESC-K-  188 (346)
Q Consensus       117 ~~l~~~l~~~~~~-g~~v~vHa-E~~~~~~~~~~~E~~av~~~l~~~la~~~g~---~lhi~HvS-t~~~l~~i~~a-k-  188 (346)
                      ..+...++.++++ |+||++|+ .+.+.           -...+. .+.+..+.   ++.+.|+- +..+++..+++ + 
T Consensus       179 ~~f~aq~~~A~~~~glPV~iH~~r~~~a-----------~~e~l~-iL~e~~~~~~~~vvi~H~~rs~~~~e~a~~~l~~  246 (365)
T 3rhg_A          179 NSLRAAALAQNNNPYASMNIHMPGWQRR-----------GDEVLD-ILLTEMGCDPAKISLAHSDPSGKDIDYQCKMLDR  246 (365)
T ss_dssp             HHHHHHHHHHTTCTTCEEEEECCTTSCC-----------HHHHHH-HHTTTTCCCGGGEEESCCGGGTTCHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhcCCcEEEECCCCCcC-----------HHHHHH-HHHhccCCCCCceEEecCCCCCCCHHHHHHHHhC
Confidence            5677888999999 99999998 64321           112231 23333254   47788998 43445544443 2 


Q ss_pred             CCeeEEEccchhhccchhhhccCCCCCceEEeCCCCCh-hhHHHHHHHHHcCCccEE-eecCCCCCCccccccCCCCCCc
Q 019093          189 EGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKRE-IHRQAVVSAVTSGSRKFF-LGTDSAPHERGRKECACGCAGI  266 (346)
Q Consensus       189 g~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~-~d~~aL~~al~~G~Id~~-i~SDHaP~~~~~K~~~~~~~G~  266 (346)
                      |..+.....---.+     +..    ...  .|   +. +.-+.|.+.++.|-.|=+ ++||- |+..-     +...|=
T Consensus       247 G~~I~~~g~g~~~t-----f~~----~~~--~~---~d~~~a~~l~~li~~g~~drilleTD~-p~l~~-----~~~~G~  306 (365)
T 3rhg_A          247 GVWLEFDMIGLDIS-----FPK----EGA--AP---SVMDTVEAVATLIERGYGNQIVLSHDV-FLKQM-----WAKNGG  306 (365)
T ss_dssp             TCEEEECCTTCCCB-----CSS----SCB--CC---CHHHHHHHHHHHHHTTCGGGEEECCCC-CSGGG-----SGGGTS
T ss_pred             CCEEEecCCCcccc-----ccc----ccc--cc---chHHHHHHHHHHHHhCCCCcEEEeCCC-CCCCC-----CCcCCC
Confidence            54333332100000     100    001  11   22 234467788888877632 67774 65211     111121


Q ss_pred             cchhHHHHHHHHHHHhc-CCHHHHHHHHchhhhhhcCCCCC
Q 019093          267 YNAPVALSLYAKVFEEM-GALDKLEAFTSFNGPDFYGLPRN  306 (346)
Q Consensus       267 ~g~e~~lp~l~~~~~~~-~~l~~lv~~~s~nPAki~gl~~k  306 (346)
                      ++....+..+...+..+ .+.+++.+++..||+|+|+++.+
T Consensus       307 ~~~~~l~~~~~~~~~~~Gis~e~i~~~~~~Np~rlf~l~~~  347 (365)
T 3rhg_A          307 NGWGFVPNVFLSLLAQRGIDKTIIDKLCIDNPANLLAAENL  347 (365)
T ss_dssp             CTTTHHHHTHHHHHHHTTCCHHHHHHHTTHHHHHHHHSCCS
T ss_pred             CCchhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHCCCCc
Confidence            44444444333333344 48999999999999999999654

>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*

Probab=96.67  E-value=0.065  Score=50.31  Aligned_cols=152  Identities=10%  Similarity=0.072  Sum_probs=79.0

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCC---CcEEEEccC-CHHHHHHHHcc-C-CC
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQ---LKVVMEHIT-TMDAVKFVESC-K-EG  190 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g---~~lhi~HvS-t~~~l~~i~~a-k-g~  190 (346)
                      ..+...++.++++|+||++|++...-      +    .. .+  .+.+..+   .++.+.|+- +. +++..+++ + |.
T Consensus       173 ~~f~aq~~lA~~~glPViiH~~~gr~------a----~~-~~--~iL~~~~~~~~~~vi~H~~~~~-~~e~a~~~l~~G~  238 (339)
T 3gtx_A          173 LFFRAAARVQRETGVPIITHTQEGQQ------G----PQ-QA--ELLTSLGADPARIMIGHMDGNT-DPAYHRETLRHGV  238 (339)
T ss_dssp             HHHHHHHHHHHHHCCCEEEECSTTCC------H----HH-HH--HHHHHTTCCGGGEEECCGGGCC-CHHHHHHHHTTTC
T ss_pred             HHHHHHHHHHHHHCCeEEEeCCCCcC------H----HH-HH--HHHHHcCCCcccEEEEccCCCC-CHHHHHHHHHcCc
Confidence            46778889999999999999975321      1    11 12  2222233   357788995 32 34444332 2 54


Q ss_pred             eeEEEccchhhccchhhhccCCCCCceEEeCCCCCh-hhHHHHHHHHHcCCccE-EeecCCCCCCc-cc-----cccCCC
Q 019093          191 FVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKRE-IHRQAVVSAVTSGSRKF-FLGTDSAPHER-GR-----KECACG  262 (346)
Q Consensus       191 ~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~-~d~~aL~~al~~G~Id~-~i~SDHaP~~~-~~-----K~~~~~  262 (346)
                      .+.....-     + +        ++. -.|   +. +.-+.|.+.++.|-.|= +++|| +|+.. .+     |... .
T Consensus       239 ~i~~~g~~-----t-~--------~~~-~~p---~~~~~~~~l~~li~~~~~drilleTD-~p~~~~~~P~~~p~~~~-~  298 (339)
T 3gtx_A          239 SIAFDRIG-----L-Q--------GMV-GTP---TDAERLSVLTTLLGEGYADRLLLSHD-SIWHWLGRPPAIPEAAL-P  298 (339)
T ss_dssp             EEEECCTT-----C-C--------SST-TCC---CHHHHHHHHHHHHHTTCGGGEEECCC-CEEEESSSCCCCCGGGH-H
T ss_pred             EEEEccCc-----c-c--------ccc-CCC---chHHHHHHHHHHHHhcCCCeEEEecC-CCccccCCccccccccc-c
Confidence            33322210     0 0        000 001   11 33345677777766663 26777 46531 00     1000 0


Q ss_pred             CCCccchhHHHHHHHHHHHhcC-CHHHHHHHHchhhhhhcC
Q 019093          263 CAGIYNAPVALSLYAKVFEEMG-ALDKLEAFTSFNGPDFYG  302 (346)
Q Consensus       263 ~~G~~g~e~~lp~l~~~~~~~~-~l~~lv~~~s~nPAki~g  302 (346)
                      ..|..+..+.+-.+...+..++ +.+++.+++..||+|+||
T Consensus       299 ~~g~n~p~~l~~~~~~~~~~~Gis~e~i~~~~~~Np~rlf~  339 (339)
T 3gtx_A          299 AVKDWHPLHISDDILPDLRRRGITEEQVGQMTVGNPARLFG  339 (339)
T ss_dssp             HHHTCSTTHHHHTHHHHHHHTTCCHHHHHHHHTHHHHHHHC
T ss_pred             cCCCCCchhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhC
Confidence            0012333333333433444444 899999999999999996

>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}

Probab=96.65  E-value=0.027  Score=53.46  Aligned_cols=157  Identities=12%  Similarity=0.068  Sum_probs=82.7

Q ss_pred             HHHHHHHHHhHHcCCcEEEecC-CCCCCCChhhhHHHHHHHHHHHHHHhCCCC---cEEEEccC-CHHHHHHHHcc-C-C
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGE-VTDPIVDIFDREKVFIDTILQPLIQRLPQL---KVVMEHIT-TMDAVKFVESC-K-E  189 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE-~~~~~~~~~~~E~~av~~~l~~~la~~~g~---~lhi~HvS-t~~~l~~i~~a-k-g  189 (346)
                      ..+...++.++++|+||++|++ ..+.           -...+  .+.+..|.   ++.+.|+- +..+++..+++ + |
T Consensus       190 ~~f~aq~~~A~~~glPV~iH~~gr~~a-----------~~e~l--~iL~e~g~~~~~vvi~H~~~s~~~~e~a~~~l~~G  256 (364)
T 3k2g_A          190 KSLRGAARAQVRTGLPLMVHLPGWFRL-----------AHRVL--DLVEEEGADLRHTVLCHMNPSHMDPVYQATLAQRG  256 (364)
T ss_dssp             HHHHHHHHHHHHHCCCEEEECCTTSCC-----------HHHHH--HHHHHTTCCGGGEEECCCGGGTTCHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHCCeEEEecCCCCcc-----------HHHHH--HHHHHcCCCCCceEEECCCCCCCCHHHHHHHHhCC
Confidence            4677888889999999999985 2111           11122  12222243   47788997 33244444443 2 5


Q ss_pred             CeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEE-eecCCCCCCccccccCCCCCCccc
Q 019093          190 GFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFF-LGTDSAPHERGRKECACGCAGIYN  268 (346)
Q Consensus       190 ~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~-i~SDHaP~~~~~K~~~~~~~G~~g  268 (346)
                      ..+.....-     +.-.|..    ..+. .|.  +.+.-+.|.+.++.|-.|=+ ++||- |.....+.  .+  | ++
T Consensus       257 ~~I~f~g~g-----t~~~f~~----~~~~-~~~--d~~ra~~l~~lv~~gp~drilleTD~-p~~~~~~~--~g--g-~~  318 (364)
T 3k2g_A          257 AFLEFDMIG-----MDFFYAD----QGVQ-CPS--DDEVARAILGLADHGYLDRILLSHDV-FVKMMLTR--YG--G-NG  318 (364)
T ss_dssp             CEEEECCTT-----CCCEETT----TTEE-CCC--HHHHHHHHHHHHHTTCGGGEEECCCC-CSGGGSGG--GT--S-CT
T ss_pred             cEEEecCCc-----ccccccc----cccc-ccc--HHHHHHHHHHHHHhCCcccEEEeCCC-CCCCCCCC--CC--C-CC
Confidence            444333210     0000100    0010 121  12334567788888877632 67884 54211111  11  3 44


Q ss_pred             hhHHHHHHHHHHHhc-CCHHHHHHHHchhhhhhcCCC
Q 019093          269 APVALSLYAKVFEEM-GALDKLEAFTSFNGPDFYGLP  304 (346)
Q Consensus       269 ~e~~lp~l~~~~~~~-~~l~~lv~~~s~nPAki~gl~  304 (346)
                      ....+..+...+..+ .+.+++.+++..||+|+|+++
T Consensus       319 ~~~l~~~~~~~l~~~Gis~eei~~~~~~Np~rlf~l~  355 (364)
T 3k2g_A          319 YAFVTKHFLPRLRRHGLDDAALETLMVTNPRRVFDAS  355 (364)
T ss_dssp             TSHHHHHHHHHHHHTTCCHHHHHHHHTHHHHHHHCTT
T ss_pred             cchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCC
Confidence            444444333333334 489999999999999999994

>3mkv_A Putative amidohydrolase; sargasso SEA, structural genomics, protein structure initiat NEW YORK structural genomix research consortium, nysgxrc; HET: KCX; 2.40A {Undefined}

Probab=96.43  E-value=0.0028  Score=58.03  Aligned_cols=36  Identities=8%  Similarity=0.234  Sum_probs=30.5

Q ss_pred             HHHhcCCHHHHHHHHchhhhhhcCC-CC-C------CccEEEEe
Q 019093          279 VFEEMGALDKLEAFTSFNGPDFYGL-PR-N------TSKIKLTK  314 (346)
Q Consensus       279 ~~~~~~~l~~lv~~~s~nPAki~gl-~~-k------dAdlvi~d  314 (346)
                      ...+..++++++++++.||||+||| ++ +      +|||||||
T Consensus       341 ~~~~gls~~eal~~~T~~pA~~lgl~~~~Gsi~~G~~ADlvvlD  384 (426)
T 3mkv_A          341 ILAEVLSPAEVIASATIVSAEVLGMQDKLGRIVPGAHADVLVVD  384 (426)
T ss_dssp             HHHTTSCHHHHHHHTTHHHHHHTTCBTTBSSCCTTSBCCEEEES
T ss_pred             HHHhCCCHHHHHHHHHHHHHHHhCCCCCcceeCCCCcceEEEEC
Confidence            3445569999999999999999999 44 2      89999998

>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0

Probab=96.00  E-value=0.097  Score=48.94  Aligned_cols=155  Identities=14%  Similarity=0.107  Sum_probs=79.5

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccC-CHHHHHHHHcc-C-CCeeE
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHIT-TMDAVKFVESC-K-EGFVA  193 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvS-t~~~l~~i~~a-k-g~~vt  193 (346)
                      ..+.+.++.++++|+||++|+.+..-     ..|   .-+++  .-......++.+.|+. + .+++..+++ + |..+.
T Consensus       168 ~~f~aq~~~A~~~glPViiH~r~g~~-----a~~---~l~iL--~e~~~~~~~vvi~H~~~s-~~~e~a~~~l~~G~~i~  236 (330)
T 3pnz_A          168 KTIRAVARAHHETKAPIHSHTEAGTM-----ALE---QIEIL--KQENIPLEYLSIGHMDRN-LDPYYHKQVAKTGAFMS  236 (330)
T ss_dssp             HHHHHHHHHHHHHCCCEEEECGGGCC-----HHH---HHHHH--HHTTCCGGGEEETTGGGS-CCHHHHHHHHTTTCEEE
T ss_pred             HHHHHHHHHHHHHCCeEEEeCCCCcC-----hHH---HHHHH--HHcCCCCCeEEEecCCCC-CCHHHHHHHHHcCcEEE
Confidence            56778889999999999999986311     011   11222  1111122357888984 3 223333322 2 43332


Q ss_pred             EEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCcc-EEeecCCCCCCccccccCCCCCCccch-hH
Q 019093          194 ATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRK-FFLGTDSAPHERGRKECACGCAGIYNA-PV  271 (346)
Q Consensus       194 ~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id-~~i~SDHaP~~~~~K~~~~~~~G~~g~-e~  271 (346)
                      .....                + ++. +|  ..+.-+.|.+.++.|-.| ++++||- |+..--+..+ ..+|..-+ ..
T Consensus       237 ~~g~~----------------t-~~~-~~--~~~~~~~l~~lv~~g~~drilleTD~-p~~~~~~~~G-~~~~~~~~~~~  294 (330)
T 3pnz_A          237 FDGIA----------------K-IKY-AP--ESARIAAILYLVSEGFEDQILVSGDT-ARKTYYKHYG-HGPGLEYIAKK  294 (330)
T ss_dssp             ECCTT----------------C-TTT-CC--HHHHHHHHHHHHHTTCGGGEEECCCC-CSGGGSHHHH-CCSTTTHHHHT
T ss_pred             EccCc----------------c-cCC-CC--hHHHHHHHHHHHHcCCCCeEEEeCCC-CCCCCCCccC-CCCCcchHHHH
Confidence            22110                0 000 11  122234566667777555 3367774 6521111110 02343333 33


Q ss_pred             HHHHHHHHHHhc-CCHHH-HHHHHchhhhhhcCCC
Q 019093          272 ALSLYAKVFEEM-GALDK-LEAFTSFNGPDFYGLP  304 (346)
Q Consensus       272 ~lp~l~~~~~~~-~~l~~-lv~~~s~nPAki~gl~  304 (346)
                      .+|.+......+ .+.++ +.+++..||+|+|++.
T Consensus       295 ~~~~l~~~a~~~Gis~ee~i~~~t~~Np~rlf~l~  329 (330)
T 3pnz_A          295 WVPRFIDEANEKGFDGEKLVKKFFVDNPARCFTFK  329 (330)
T ss_dssp             HHHHHHHHHHHTTSCHHHHHHHHHTHHHHHHSSCC
T ss_pred             HHHHHHHHHHHcCCCHHHHHHHHHHHhHHHHhcCC
Confidence            445443222344 48998 9999999999999984

>3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A*

Probab=95.91  E-value=0.077  Score=50.31  Aligned_cols=158  Identities=11%  Similarity=0.091  Sum_probs=81.3

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHc-c-C-CCeeE
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVES-C-K-EGFVA  193 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~-a-k-g~~vt  193 (346)
                      ..+.+.++.++++|+||++|+.+..-      +. + +-++++  -......++.++|+.+..+++..++ . + |..+.
T Consensus       169 ~~f~aq~~~A~e~glPViiH~r~gr~------a~-d-~l~iL~--e~g~~~~~vvi~H~~~~~~~~~a~~~l~~~G~yI~  238 (363)
T 3ovg_A          169 KALEVAARTSILTGCPILVHTQLGTM------AL-E-VAKHLI--GFGANPDKIQISHLNKNPDKYYYEKVIKETGVTLC  238 (363)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEETTCS------HH-H-HHHHHH--HHTCCGGGEEEECGGGSCCHHHHHHHHHHHCCEEE
T ss_pred             HHHHHHHHHHHHhCCEEEEeCCCCCC------HH-H-HHHHHH--hcCCCCCcEEEEcCCCCCCHHHHHHHHHHCCcEEE
Confidence            46778889999999999999986421      11 1 113331  1122234688999984222322221 1 2 44333


Q ss_pred             EEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccE-EeecCCCCCCccccccCCCCCC--ccchh
Q 019093          194 ATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKF-FLGTDSAPHERGRKECACGCAG--IYNAP  270 (346)
Q Consensus       194 ~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~-~i~SDHaP~~~~~K~~~~~~~G--~~g~e  270 (346)
                      .....           .  + .+   .|   +.+.-+.|.+.++.|-.|= +++|| +|...--...+. ..|  ..+..
T Consensus       239 f~g~~-----------~--~-~~---~~---~~~ra~~l~~lv~~~p~drILleTD-ap~~~~l~~~G~-~~g~~~n~p~  296 (363)
T 3ovg_A          239 FDGPD-----------R--V-KY---YP---DSLLAENIKYLVDKGLQKHITLSLD-AGRILYQRNYGL-TKGKQTFGLA  296 (363)
T ss_dssp             ECCTT-----------C--T-TT---CC---HHHHHHHHHHHHHTTCGGGEEECCC-CCSGGGSHHHHH-HTTEECCCTH
T ss_pred             ECCee-----------c--c-cc---CC---hhHHHHHHHHHHHhcCCCeEEEeCC-CCCCcCCCCCCc-cCCCCCCCcc
Confidence            32110           0  0 01   01   1223346777777777662 26777 464211100000 001  01222


Q ss_pred             HHHHHHHHHHHhc-CCHHHHHHHHchhhhhhcCCCCC
Q 019093          271 VALSLYAKVFEEM-GALDKLEAFTSFNGPDFYGLPRN  306 (346)
Q Consensus       271 ~~lp~l~~~~~~~-~~l~~lv~~~s~nPAki~gl~~k  306 (346)
                      +.+-.+...+..+ .+.+++.+++..||+|+|+++.+
T Consensus       297 ~l~~~~~~~a~~rGis~eei~~it~~Np~rlf~l~~~  333 (363)
T 3ovg_A          297 YLFDRFLPLLKQVGVSKEAIFDILVNNPKRVLAFDEK  333 (363)
T ss_dssp             HHHHTHHHHHHHHTCCHHHHHHHHTHHHHHHTSCCCC
T ss_pred             HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHCCCCc
Confidence            2222233333334 48999999999999999999543

>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}

Probab=95.58  E-value=0.087  Score=47.55  Aligned_cols=24  Identities=17%  Similarity=0.162  Sum_probs=20.8

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCC
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVT  140 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~  140 (346)
                      ..+.+.++.++++|+||++|+.+.
T Consensus       110 ~~f~~ql~lA~e~~lPv~iH~r~~  133 (261)
T 3guw_A          110 EVLKSQLELAKRMDVPCIIHTPRG  133 (261)
T ss_dssp             HHHHHHHHHHHHHTCCEEEECCSS
T ss_pred             HHHHHHHHHHHHhCCeEEEEcCCC
Confidence            457788999999999999999864

>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15

Probab=95.27  E-value=0.058  Score=50.44  Aligned_cols=93  Identities=22%  Similarity=0.308  Sum_probs=57.0

Q ss_pred             CHHHHHHHHH-cCCeeEEEEeecCCccC-CCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCC--C--Ch-hhh-HHH
Q 019093           81 SPDEIKLARK-TGVVFAVKLYPAGATTN-SQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPI--V--DI-FDR-EKV  152 (346)
Q Consensus        81 ~~~el~~l~~-~G~v~~~Kif~~~~~~~-~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~--~--~~-~~~-E~~  152 (346)
                      ..+||.++.+ .| +.|+|+.+...... ....+.+  ..++.+++.++++|++|++|+.+...-  .  .. ... +..
T Consensus       124 a~~eL~r~~~~~g-~~Gv~l~~~~~~~~~~~~~l~d--~~~~p~~~~a~e~~lpv~iH~~~~~~~~~~~~~~~~~~~~~~  200 (350)
T 2gwg_A          124 CIPELEKCVKEYG-FVAINLNPDPSGGHWTSPPLTD--RIWYPIYEKMVELEIPAMIHVSTSCNTCFHTTGAHYLNADTT  200 (350)
T ss_dssp             GHHHHHHHHHTSC-CCEEEECSCTTSSCCCSCCTTS--GGGHHHHHHHHHHTCCEEECCCC---------TTHHHHHHHH
T ss_pred             HHHHHHHHHhccC-CeEEEECCCCCCccCCCCCCCC--HHHHHHHHHHHHcCCeEEECCCCCCcccccccccccchHHHH
Confidence            3568888874 67 78999976421100 1122444  678999999999999999999865310  0  00 111 222


Q ss_pred             HHHHHH-HHHHHhCCCCcEEEEccC
Q 019093          153 FIDTIL-QPLIQRLPQLKVVMEHIT  176 (346)
Q Consensus       153 av~~~l-~~~la~~~g~~lhi~HvS  176 (346)
                      ++.+++ ...+.+++++++.+.|..
T Consensus       201 a~~~li~~~v~~~~P~l~~vi~H~G  225 (350)
T 2gwg_A          201 AFMQCVAGDLFKDFPELKFVIPHGG  225 (350)
T ss_dssp             HHHHHHHSCHHHHCTTCCEEESGGG
T ss_pred             HHHHHHhcCccccCCCCcEEeccCC
Confidence            222221 124678899999999996

>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0

Probab=93.69  E-value=0.47  Score=42.50  Aligned_cols=136  Identities=14%  Similarity=0.185  Sum_probs=72.7

Q ss_pred             HHHHHHHHHhHHcCCcEE-EecCCCCCCCChhhhHHHHHHHHHHHHHHhCCC-CcEEEEccCC--HHHHHHHHccCCCee
Q 019093          117 GKCVHVLEEMVEQNMPLL-VHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQ-LKVVMEHITT--MDAVKFVESCKEGFV  192 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~-vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g-~~lhi~HvSt--~~~l~~i~~akg~~v  192 (346)
                      ..+.+.++.++++|+||+ +|+.+..             ..+++ .+.++.. .++ |.|.-+  .+.++.+.+. |  +
T Consensus       104 ~~F~~ql~lA~e~~lPviSiH~r~a~-------------~~~~~-il~~~~~~~~~-v~H~fsG~~e~a~~~l~~-G--~  165 (254)
T 3gg7_A          104 AVFQHILRRCEDHGGRILSIHSRRAE-------------SEVLN-CLEANPRSGTP-ILHWYSGSVTELRRAISL-G--C  165 (254)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEECTTCH-------------HHHHH-HHHHCGGGEEE-EEETCCSCHHHHHHHHHT-T--C
T ss_pred             HHHHHHHHHHHHcCCCEEEEEcCCcH-------------HHHHH-HHHHcCCCCcE-EEEeCCCCHHHHHHHHcC-C--c
Confidence            457788999999999998 9999741             22331 2333322 233 447543  3333333221 2  2


Q ss_pred             EEEccchhhccchhhhccCCCCCceEEeCCC-CChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhH
Q 019093          193 AATVTPQHLVLNRNALFQGGLRPHNYCLPVL-KREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPV  271 (346)
Q Consensus       193 t~Et~ph~L~l~~~~~~~~~~~~~~k~~PPL-R~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~  271 (346)
                      +..+++                       ++ |.++-|+ +.+.+--.  .+++.||. |+...        .|-.+-..
T Consensus       166 yis~~g-----------------------~~~~~~~~~~-~v~~ip~d--rlLlETD~-P~~~~--------rg~~n~P~  210 (254)
T 3gg7_A          166 WFSVGP-----------------------TMVRTQKGAA-LIRSMPRD--RVLTETDG-PFLEL--------DGQAALPW  210 (254)
T ss_dssp             EEEECH-----------------------HHHTSHHHHH-HHHHSCGG--GEEECCCT-TTSEE--------TTEECCGG
T ss_pred             EEEECc-----------------------ccCchHHHHH-HHHHcCCC--eEEEeCCC-Ccccc--------CCCCCCHH
Confidence            222222                       11 2333332 33333222  23478995 77421        13233334


Q ss_pred             HHHHHHHHHH--hcCCHHHHHHHHchhhhhhcCCCC
Q 019093          272 ALSLYAKVFE--EMGALDKLEAFTSFNGPDFYGLPR  305 (346)
Q Consensus       272 ~lp~l~~~~~--~~~~l~~lv~~~s~nPAki~gl~~  305 (346)
                      .++.....+.  +..+.+++.+.+..|+.++||+++
T Consensus       211 ~v~~v~~~iA~~~g~~~ee~~~~~~~N~~~lf~~~~  246 (254)
T 3gg7_A          211 DVKSVVEGLSKIWQIPASEVERIVKENVSRLLGTVR  246 (254)
T ss_dssp             GHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHCCCc
Confidence            4665544332  234899999999999999999965

>3mkv_A Putative amidohydrolase; sargasso SEA, structural genomics, protein structure initiat NEW YORK structural genomix research consortium, nysgxrc; HET: KCX; 2.40A {Undefined}

Probab=93.43  E-value=0.018  Score=52.49  Aligned_cols=16  Identities=19%  Similarity=0.260  Sum_probs=14.3

Q ss_pred             eEEecCccccceecCC
Q 019093            2 ELTLTQPDDWHLHLRD   17 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~   17 (346)
                      ++|+||+||+|+|+..
T Consensus        55 ~~v~PGfID~H~H~~~   70 (426)
T 3mkv_A           55 KTIMPGLIDLHVHVVA   70 (426)
T ss_dssp             CEEEECEEEEEECTTC
T ss_pred             CEEEeChhhhhhCccc
Confidence            5899999999999864

>2qpx_A Predicted metal-dependent hydrolase of the TIM-BA; YP_805737.1, putative metal-dependent hydrolase; HET: KCX MSE; 1.40A {Lactobacillus casei}

Probab=91.99  E-value=0.67  Score=43.84  Aligned_cols=149  Identities=16%  Similarity=0.101  Sum_probs=74.4

Q ss_pred             HHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHH--hCCCCcEEEEccCCH---HHHHHHHccCCCeeE
Q 019093          119 CVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQ--RLPQLKVVMEHITTM---DAVKFVESCKEGFVA  193 (346)
Q Consensus       119 l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la--~~~g~~lhi~HvSt~---~~l~~i~~akg~~vt  193 (346)
                      ++.+++.++++|.|+.+|+...+...+...+-...+..    .+.  +++++|+.+.| +.+   +...+++..  .+++
T Consensus       211 l~~~~e~a~e~glpv~iH~g~~d~~~~~~~~~p~~l~~----ll~~~~~P~lkiVl~H-g~~~~~~~~~l~~~~--~nvy  283 (376)
T 2qpx_A          211 LYHVAPFIIAQDMPLQFHVGYGDADTDMYLGNPLLMRD----YLKAFTKKGLKVVLLH-CYPYHREAGYLASVF--PNLY  283 (376)
T ss_dssp             HHHHHHHHHHHTCCEEEEESCCCTTSCGGGCCGGGGHH----HHHHHGGGTCCEEEEE-CTTCHHHHHHHHHHS--TTEE
T ss_pred             HHHHHHHHHHCCCeEEEEeCCCCCCCCccccCHHHHHH----HHhcCCCCCCcEEEEC-CCccHHHHHHHHHhC--CCEE
Confidence            44555999999999999998632100011010011222    345  78999999999 542   222222222  2567


Q ss_pred             EEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCc-cEEeecCCCCCCccccccCCCCCCccchhHH
Q 019093          194 ATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSR-KFFLGTDSAPHERGRKECACGCAGIYNAPVA  272 (346)
Q Consensus       194 ~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~I-d~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~  272 (346)
                      +.++.  +.+.               +|    ...++.|-+.+...-. .+++|||. |+..+..        .++-+..
T Consensus       284 ~d~s~--~~~~---------------~~----~~~~~~l~~l~~~~g~dRiLfGSD~-P~~~e~~--------~~~~~~~  333 (376)
T 2qpx_A          284 FDISL--LDNL---------------GP----SGASRVFNEAVELAPYTRILFASDA-STYPEMY--------GLAARQF  333 (376)
T ss_dssp             EECTT--HHHH---------------SG----GGHHHHHHHHTSSSCGGGEECCCCC-CBSHHHH--------HHHHHHH
T ss_pred             Eeccc--cccc---------------Ch----hhHHHHHHHHHHhcCCCCEEEECCC-Cccchhh--------cccHHHH
Confidence            77665  2111               00    1233445454443322 22478886 6532100        0001111


Q ss_pred             HHHHHHHHHh-cCCHHH-----HHHHHchhhhhhcCCC
Q 019093          273 LSLYAKVFEE-MGALDK-----LEAFTSFNGPDFYGLP  304 (346)
Q Consensus       273 lp~l~~~~~~-~~~l~~-----lv~~~s~nPAki~gl~  304 (346)
                      ...+..+..+ ..+.+.     +.+++..|++|+||++
T Consensus       334 ~~~l~~l~~~~~ls~~~~~~~~~~~I~~~NA~rlf~l~  371 (376)
T 2qpx_A          334 KQALVAHFNQLPFVDLAQKKAWINAICWQTSAKLYHQE  371 (376)
T ss_dssp             HHHHHHHHHTCSSCCHHHHHHHHHHHHTHHHHHHTTCG
T ss_pred             HHHHHHHHcccCcchhhcCHHHHHHHHHHhHHHHhCCC
Confidence            2222222221 122233     7789999999999994

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	346
d2eg6a1	343	c.1.9.4 (A:4-346) Dihydroorotase {Escherichia coli	3e-88
d1xrta2	310	c.1.9.6 (A:56-365) Two-domain dihydroorotase {Aqui	2e-22
d2ftwa2	334	c.1.9.6 (A:60-393) Dihydropyrimidine amidohydrolas	1e-04
d1gkra2	325	c.1.9.6 (A:55-379) L-hydantoinase {Arthrobacter au	3e-04
d1gkpa2	335	c.1.9.6 (A:55-389) D-hydantoinase {Thermus sp. [Ta	0.001
d1ynya2	332	c.1.9.6 (A:53-384) D-hydantoinase {Bacillus sp. AR	0.003

>d2eg6a1 c.1.9.4 (A:4-346) Dihydroorotase {Escherichia coli [TaxId: 562]} Length = 343

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Dihydroorotase
domain: Dihydroorotase
species: Escherichia coli [TaxId: 562]

 Score =  266 bits (681), Expect = 3e-88
 Identities = 195/341 (57%), Positives = 238/341 (69%), Gaps = 2/341 (0%)

Query: 2   ELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKA 61
            L + +PDDWHLHLRDGD+LK VVP++   YGRAIVMPNL PP+TT  AAVAYR+ IL A
Sbjct: 3   VLKIRRPDDWHLHLRDGDMLKTVVPYTSEIYGRAIVMPNLAPPVTTVEAAVAYRQRILDA 62

Query: 62  LPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVH 121
           +PA  +FTPLMT YLTD+  P+E++     GV  A KLYPA ATTNS  GVT      + 
Sbjct: 63  VPAGHDFTPLMTCYLTDSLDPNELERGFNEGVFTAAKLYPANATTNSSHGVTS-VDAIMP 121

Query: 122 VLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAV 181
           VLE M +  MPLLVHGEVT   +DIFDRE  FI+++++PL QRL  LKVV EHITT DA 
Sbjct: 122 VLERMEKIGMPLLVHGEVTHADIDIFDREARFIESVMEPLRQRLTALKVVFEHITTKDAA 181

Query: 182 KFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSR 241
            +V    E  +AAT+TPQHL+ NRN +  GG+RPH YCLP+LKR IH+QA+   V SG  
Sbjct: 182 DYVRDGNE-RLAATITPQHLMFNRNHMLVGGVRPHLYCLPILKRNIHQQALRELVASGFN 240

Query: 242 KFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFY 301
           + FLGTDSAPH R RKE +CGCAG +NAP AL  YA VFEEM AL   EAF S NGP FY
Sbjct: 241 RVFLGTDSAPHARHRKESSCGCAGCFNAPTALGSYATVFEEMNALQHFEAFCSVNGPQFY 300

Query: 302 GLPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQ 342
           GLP N + I+L +   +V E+ + +   ++P  AG T+ W 
Sbjct: 301 GLPVNDTFIELVREEQQVAESIALTDDTLVPFLAGETVRWS 341

>d1xrta2 c.1.9.6 (A:56-365) Two-domain dihydroorotase {Aquifex aeolicus [TaxId: 63363]} Length = 310

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase), catalytic domain
domain: Two-domain dihydroorotase
species: Aquifex aeolicus [TaxId: 63363]

 Score = 93.9 bits (232), Expect = 2e-22
 Identities = 68/314 (21%), Positives = 103/314 (32%), Gaps = 26/314 (8%)

Query: 10  DWHLHLRDGDLLKAVVPHSVSH------YGRAIVMPNLKPPITTTAAAVAYRESILKALP 63
           D H+HLRD          S S       +   + MPN  PPI  T         IL+   
Sbjct: 4   DIHVHLRDPGQTYKEDIESGSRCAVAGGFTTIVCMPNTNPPIDNTTVV----NYILQKSK 59

Query: 64  ASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGAT-TNSQDGVTDLFGKCVHV 122
           +      L T  +T      EI           V     G+   +S      L       
Sbjct: 60  SVGLCRVLPTGTITKGRKGKEIADFYSLKEAGCVAFTDDGSPVMDSSVMRKALELASQLG 119

Query: 123 LEEMVEQNMPLLVHGEVTDPIVDIF------DREKVFIDTILQPLIQRLPQLKVVMEHIT 176
           +  M       L +G + +  V           E   I      ++ +     V ++H++
Sbjct: 120 VPIMDHCEDDKLAYGVINEGEVSALLGLSSRAPEAEEIQIARDGILAQRTGGHVHIQHVS 179

Query: 177 TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAV 236
           T  +++ +E  KE  V  T       L            +    P L+++  R A++  V
Sbjct: 180 TKLSLEIIEFFKEKGVKITCEVNPNHLLFTEREVLNSGANARVNPPLRKKEDRLALIEGV 239

Query: 237 TSGSRKFFLGTDSAPHERGRKE----CACGCAGIYNA-PVALSLYAKVFEEMGALDKLEA 291
             G       TD APH+   KE       G  G+  A P AL LY K    + +L KL  
Sbjct: 240 KRGI-IDCFATDHAPHQTFEKELVEFAMPGIIGLQTALPSALELYRK---GIISLKKLIE 295

Query: 292 FTSFNGPDFYGLPR 305
             + N     G+  
Sbjct: 296 MFTINPARIIGVDL 309

>d2ftwa2 c.1.9.6 (A:60-393) Dihydropyrimidine amidohydrolase Pyd2 {Dictyostelium discoideum [TaxId: 44689]} Length = 334

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase), catalytic domain
domain: Dihydropyrimidine amidohydrolase Pyd2
species: Dictyostelium discoideum [TaxId: 44689]

 Score = 41.1 bits (95), Expect = 1e-04
 Identities = 33/294 (11%), Positives = 88/294 (29%), Gaps = 25/294 (8%)

Query: 36  IVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVF 95
           I         +   A   +++   + +    +    +T +    +   EI +  +    F
Sbjct: 39  IDFVIPTRGQSLLEAYDQWKKWADEKVNCDYSLHVAITWWSEQVSREMEILVKERGVNSF 98

Query: 96  AVKLYPAGATTNSQDGVTDLFGKCVHV---------LEEMVEQNMPLLVHGEVTDPIVDI 146
              +    +   +   +  +F +C  +           +MV +    ++   +T P    
Sbjct: 99  KCFMAYKNSFMVTDQEMYHIFKRCKELGAIAQVHAENGDMVFEGQKKMLEMGITGPEGHE 158

Query: 147 FDREKVFIDTILQP--LIQRLPQLKVVMEHITTMDAVKFVESCKE--GFVAATVTPQHLV 202
             R +           +I       V + H+ ++ A   +   ++    V        L 
Sbjct: 159 LSRPEALEAEATNRAIVIADSVCTPVYIVHVQSIGAADVICKHRKEGVRVYGEPIAAGLG 218

Query: 203 LNRNALFQGGLRPHN--YCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKE-- 258
           ++ + ++    R        P ++ +   + V+    +      +GTD+      +K   
Sbjct: 219 VDGSHMWNHDWRHAAAFVMGPPIRPDPRTKGVLMDYLARGDLDCVGTDNCTFCADQKAMG 278

Query: 259 ------CACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGL-PR 305
                    G  G+ +  +++     V        +    TS      + + PR
Sbjct: 279 KDDFTKIPNGVNGVEDR-MSIVWENGVNTGKLTWCQFVRATSSERARIFNIYPR 331

>d1gkra2 c.1.9.6 (A:55-379) L-hydantoinase {Arthrobacter aurescens [TaxId: 43663]} Length = 325

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase), catalytic domain
domain: L-hydantoinase
species: Arthrobacter aurescens [TaxId: 43663]

 Score = 39.7 bits (91), Expect = 3e-04
 Identities = 51/330 (15%), Positives = 97/330 (29%), Gaps = 43/330 (13%)

Query: 10  DWHLHLRDGDLL-KAVVPHSVSH------YGRAIVMPNLKPPITTTAAAVAYRESILKAL 62
           D H+H+ D DL  +       S           I MP   PP TT  A +  ++      
Sbjct: 4   DEHVHIIDMDLKNRYGRFELDSESAAVGGITTIIEMPITFPPTTTLDAFLEKKKQA---- 59

Query: 63  PASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHV 122
                             +  EI+     G V       A +     D V+D  G+   +
Sbjct: 60  -GQRLKVDFALYGGGVPGNLPEIRKMHDAGAVGFKS-MMAASVPGMFDAVSD--GELFEI 115

Query: 123 LEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQ--------------- 167
            +E+      ++VH E    I  +  + K      +       P                
Sbjct: 116 FQEIAACGSVIVVHAENETIIQALQKQIKAAGGKDMAAYEASQPVFQENEAIQRALLLQK 175

Query: 168 ---LKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLK 224
               ++++ H++  D V+ +   +              LN        + P+    P ++
Sbjct: 176 EAGCRLIVLHVSNPDGVELIHQAQSEGQDVHCESGPQYLNITTDDAERIGPYMKVAPPVR 235

Query: 225 REIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKE--------CACGCAGIYNAPVALSLY 276
                  +   + +G      G+D   H    KE           G  G+  + + + L 
Sbjct: 236 SAEMNIRLWEQLENGLIDTL-GSDHGGHPVEDKEPGWKDVWKAGNGALGLETS-LPMMLT 293

Query: 277 AKVFEEMGALDKLEAFTSFNGPDFYGLPRN 306
             V +   +L++L           +G+   
Sbjct: 294 NGVNKGRLSLERLVEVMCEKPAKLFGIYPQ 323

>d1gkpa2 c.1.9.6 (A:55-389) D-hydantoinase {Thermus sp. [TaxId: 275]} Length = 335

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase), catalytic domain
domain: D-hydantoinase
species: Thermus sp. [TaxId: 275]

 Score = 38.0 bits (87), Expect = 0.001
 Identities = 39/297 (13%), Positives = 78/297 (26%), Gaps = 23/297 (7%)

Query: 36  IVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVF 95
           I M               ++            F   ++ +   T       +A       
Sbjct: 37  IEMCCPSRNDDALEGYQLWKSKAEGNSYCDYTFHMAVSKFDEKTEGQLREIVADGISSFK 96

Query: 96  AVKLYPAGATTNSQDGVTDLF-----GKCVHVLE---EMVEQNMPLLVHGEVTDPIVDIF 147
               Y      +  +    L      G  V       E+V +    L+    T P     
Sbjct: 97  IFLSYKNFFGVDDGEMYQTLRLAKELGVIVTAHCENAELVGRLQQKLLSEGKTGPEWHEP 156

Query: 148 DREKVFIDTILQPLI--QRLPQLKVVMEHITTMDAVKFVESC--KEGFVAATVTPQHLVL 203
            R +                      + H++   A+    +   +   +       H +L
Sbjct: 157 SRPEAVEAEGTARFATFLETTGATGYVVHLSCKPALDAAMAAKARGVPIYIESVIPHFLL 216

Query: 204 NRNALFQGGLRPHNYCLPV-LKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRK----- 257
           ++    +GG+    Y +   L+ + +++ +  A+  G     +GTD  P +  +K     
Sbjct: 217 DKTYAERGGVEAMKYIMSPPLRDKRNQKVLWDALAQG-FIDTVGTDHCPFDTEQKLLGKE 275

Query: 258 ---ECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLPRNTSKIK 311
                  G   I +  V L     V      + +     S      +GL      I 
Sbjct: 276 AFTAIPNGIPAIEDR-VNLLYTYGVSRGRLDIHRFVDAASTKAAKLFGLFPRKGTIA 331

>d1ynya2 c.1.9.6 (A:53-384) D-hydantoinase {Bacillus sp. AR9 [TaxId: 301298]} Length = 332

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase), catalytic domain
domain: D-hydantoinase
species: Bacillus sp. AR9 [TaxId: 301298]

 Score = 36.5 bits (83), Expect = 0.003
 Identities = 42/293 (14%), Positives = 90/293 (30%), Gaps = 29/293 (9%)

Query: 36  IVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVF 95
           +     K   +  +A   + E       A  ++   + +   +    +E++    +  + 
Sbjct: 38  VDFCLTKKGESLKSAIATWHEKARGK--AVIDYGFHLMIAEANDQVLEELESVISSEGIT 95

Query: 96  AVKLYPAGATTNSQDGVTDL--------FGKCVHVLEE---MVEQNMPLLVHGEVTDPIV 144
           ++K++ A       D  T           G  V V  E   +++      +    TDPI 
Sbjct: 96  SLKVFMAYKNVFQADDETLFKTLVKAKELGALVQVHAENGDVLDYLTKKALAEGNTDPIY 155

Query: 145 DIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKEG-----FVAATVTPQ 199
             + R     +         L  L     ++  +     V+   E       V     PQ
Sbjct: 156 HAYTRPP-EAEGEATGRAIALTALAGSQLYVVHVSCASAVQRIAEAREKGWNVYGETCPQ 214

Query: 200 HLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKE- 258
           +L L+ + + Q       Y      RE   Q V+ +         +G+D  P     ++ 
Sbjct: 215 YLALDVSIMDQPDFEGAKYVWSPPLREKWNQEVLWSALKNGILQTVGSDHCPFNFRGQKE 274

Query: 259 --------CACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGL 303
                      G   I +  + +     V +   +L++    +S      +G+
Sbjct: 275 LGRGDFTKIPNGGPLIEDR-LTILYSEGVRQGRISLNQFVDISSTKAAKLFGM 326

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	346
d2eg6a1	343	Dihydroorotase {Escherichia coli [TaxId: 562]}	100.0
d1nfga2	330	D-hydantoinase {Burkholderia pickettii [TaxId: 329	100.0
d1gkra2	325	L-hydantoinase {Arthrobacter aurescens [TaxId: 436	100.0
d1ynya2	332	D-hydantoinase {Bacillus sp. AR9 [TaxId: 301298]}	100.0
d2ftwa2	334	Dihydropyrimidine amidohydrolase Pyd2 {Dictyosteli	100.0
d1kcxa2	334	Dihydropyrimidinase related protein-1 {Mouse (Mus	100.0
d2fvka2	384	Dihydropyrimidine amidohydrolase Pyd2 {Yeast (Sacc	100.0
d1gkpa2	335	D-hydantoinase {Thermus sp. [TaxId: 275]}	100.0
d1xrta2	310	Two-domain dihydroorotase {Aquifex aeolicus [TaxId	100.0
d1i0da_	331	Phosphotriesterase (parathion hydrolase, PTE) {Pse	99.95
d1onwa2	284	Isoaspartyl dipeptidase, catalytic domain {Escheri	99.73
d2vhla2	301	N-acetylglucosamine-6-phosphate deacetylase, NagA,	99.67
d2icsa2	267	Putative adenine deaminase EF0837 {Enterococcus fa	99.13
d1m7ja3	358	N-acyl-D-aminoacid amidohydrolase, catalytic domai	99.09
d1xrta1	112	Two-domain dihydroorotase {Aquifex aeolicus [TaxId	99.02
d1o12a2	288	N-acetylglucosamine-6-phosphate deacetylase, NagA,	98.91
d1kcxa1	142	Dihydropyrimidinase related protein-1 {Mouse (Mus	98.81
d2ftwa1	150	Dihydropyrimidine amidohydrolase Pyd2 {Dictyosteli	98.76
d1bf6a_	291	Phosphotriesterase homology protein {Escherichia c	98.54
d1gkra1	126	L-hydantoinase {Arthrobacter aurescens [TaxId: 436	98.45
d2dvta1	325	Thermophilic reversible gamma-resorcylate decarbox	98.42
d1k1da1	128	D-hydantoinase {Bacillus stearothermophilus [TaxId	98.24
d1gkpa1	123	D-hydantoinase {Thermus sp. [TaxId: 275]}	98.2
d1nfga1	127	D-hydantoinase {Burkholderia pickettii [TaxId: 329	98.2
d1ynya1	127	D-hydantoinase {Bacillus sp. AR9 [TaxId: 301298]}	98.12
d2puza2	301	Imidazolonepropionase {Agrobacterium tumefaciens [	98.08
d1yrra2	297	N-acetylglucosamine-6-phosphate deacetylase, NagA,	98.06
d2uz9a2	313	Guanine deaminase {Human (Homo sapiens) [TaxId: 96	97.85
d1zzma1	259	Putative deoxyribonuclease YjjV {Escherichia coli	97.84
d2bb0a2	300	Imidazolonepropionase {Bacillus subtilis [TaxId: 1	97.83
d2q09a2	301	Probable 4-imidazolone-5-propanoate amidohydrolase	97.82
d2gwga1	342	4-oxalomesaconate hydratase LigJ {Rhodopseudomonas	97.79
d4ubpc2	390	alpha-subunit of urease, catalytic domain {Bacillu	97.79
d2f6ka1	306	Putative amidohydrolase LP2961 {Lactobacillus plan	97.75
d1ra0a2	320	Cytosine deaminase catalytic domain {Escherichia c	97.72
d1yixa1	265	Putative deoxyribonuclease YcfH {Escherichia coli	97.71
d2i9ua2	310	Guanine deaminase {Clostridium acetobutylicum [Tax	97.68
d1e9yb2	389	alpha-subunit of urease, catalytic domain {Helicob	97.48
d2paja2	336	Hypothetical protein GOS_1943094 {Environmental sa	97.47
d1ejxc2	385	alpha-subunit of urease, catalytic domain {Klebsie	97.46
d1p1ma2	281	Hypothetical protein TM0936, probable catalytic do	97.42
d2ffia1	271	Putative 2-pyrone-4,6-dicarboxylic acid hydrolase	97.4
d1j6oa_	260	Hypothetical protein TM0667 {Thermotoga maritima [	97.22
d2hbva1	331	2-amino-3-carboxymuconate 6-semialdehyde decarboxy	97.09
d1ejxc1	181	alpha-Subunit of urease {Klebsiella aerogenes [Tax	96.79
d1xwya1	260	Deoxyribonuclease TatD (MttC) {Escherichia coli [T	96.51
d2p9ba1	118	Uncharacterized protein BL1453 {Bifidobacterium lo	96.46
d2fvka1	156	Dihydropyrimidine amidohydrolase Pyd2 {Yeast (Sacc	95.58
d1onwa1	105	Isoaspartyl dipeptidase {Escherichia coli [TaxId:	95.02
d1yrra1	85	N-acetylglucosamine-6-phosphate deacetylase, NagA	94.65
d2p9ba2	324	Uncharacterized protein BL1453 {Bifidobacterium lo	94.27
d3be7a2	303	Zn-dependent arginine carboxypeptidase {Unidentifi	93.99
d2r8ca2	311	Uncharacterized protein EAJ56179 {Unidentified org	93.0
d2qs8a2	310	Xaa-Pro dipeptidase {Alteromonas macleodii [TaxId:	92.95
d2ooda2	325	Guanine deaminase {Bradyrhizobium japonicum [TaxId	92.52
d2r8ca1	102	Uncharacterized protein EAJ56179 {Unidentified org	85.31
d1ynya1	127	D-hydantoinase {Bacillus sp. AR9 [TaxId: 301298]}	84.34
d1nfga1	127	D-hydantoinase {Burkholderia pickettii [TaxId: 329	82.9
d2fvka1	156	Dihydropyrimidine amidohydrolase Pyd2 {Yeast (Sacc	80.39

>d2eg6a1 c.1.9.4 (A:4-346) Dihydroorotase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Dihydroorotase
domain: Dihydroorotase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5.4e-71  Score=526.53  Aligned_cols=336  Identities=55%  Similarity=0.888  Sum_probs=288.8

Q ss_pred             EEecCccccceecCCCccccccccccCCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCCH
Q 019093            3 LTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSP   82 (346)
Q Consensus         3 ~vlPG~ID~HvH~r~g~~~ke~~~s~sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~   82 (346)
                      +-+|-..|+|||||||..++|+..+++||+|+|++||||.||+++++.++.+++++.......+++.++++++.+.....
T Consensus         4 ~~~~~~~D~HvH~Reg~~~~~t~aa~agG~t~v~~MPNT~Ppi~t~e~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~   83 (343)
T d2eg6a1           4 LKIRRPDDWHLHLRDGDMLKTVVPYTSEIYGRAIVMPNLAPPVTTVEAAVAYRQRILDAVPAGHDFTPLMTCYLTDSLDP   83 (343)
T ss_dssp             EEEECCCEEEECCCSHHHHHHHHHHHHTTCSEEEECCCCSSCCCSHHHHHHHHHHHHHHSCTTCCCEEEEEEECCTTCCH
T ss_pred             eEECCCCcceEecCCCchHhHHHHHHhccCCEEEECCCCCCCCCCHHHHHHHHHHHHHhccccCceeeeeeeeccCCCCh
Confidence            55788999999999988889999888999999999999999999999999998887665554467777777654544456


Q ss_pred             HHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCCh--hhhHHHHHHHHHHH
Q 019093           83 DEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDI--FDREKVFIDTILQP  160 (346)
Q Consensus        83 ~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~--~~~E~~av~~~l~~  160 (346)
                      .++.+....|.+.++|.|+...++.....+.+. ..++..++..+..+..+..|+|+.+.....  ..+|..++.+.+  
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~eae~~~~~~~~--  160 (343)
T d2eg6a1          84 NELERGFNEGVFTAAKLYPANATTNSSHGVTSV-DAIMPVLERMEKIGMPLLVHGEVTHADIDIFDREARFIESVMEP--  160 (343)
T ss_dssp             HHHHHHHHTTSEEEEEECCCCTTSCTTTCCSCG-GGGHHHHHHHHHHTCCEEECCCCCCTTSCGGGHHHHHHHHTHHH--
T ss_pred             hhhhhhhhccccccccccccchhccccccccch-HHHHHHHHHHHHhCchhhhcCccccccccccchhhhhHHHHHHH--
Confidence            677777767768888999865444333445565 778899999999999999999987754333  456667777777  


Q ss_pred             HHHhCCCCcEEEEccCCHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCC
Q 019093          161 LIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGS  240 (346)
Q Consensus       161 ~la~~~g~~lhi~HvSt~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~  240 (346)
                      .+++++++++||+|+||++++++|++++ .+||||||||||+|+.+++...++++++|||||||+++||++||+++.+|.
T Consensus       161 ~l~~~~~~~~Hi~HiSt~~~v~~ir~~~-~~vt~EvtPHhL~L~~~d~~~~~~~~~~k~nPPlR~~~d~~~l~~~~~~g~  239 (343)
T d2eg6a1         161 LRQRLTALKVVFEHITTKDAADYVRDGN-ERLAATITPQHLMFNRNHMLVGGVRPHLYCLPILKRNIHQQALRELVASGF  239 (343)
T ss_dssp             HHHHCTTCCEEECSCCSHHHHHHHHTSC-TTEEEEECHHHHHCCHHHHHTTSBCGGGCCSSCCCCHHHHHHHHHHHHTTC
T ss_pred             HHhhccCceEEEEecchhHHHHHHHhcC-CCcceeecCcHHHhhhhhhhcCCCccceeeeccccccchhhHHHHHHHcCC
Confidence            8999999999999999999999999876 679999999999999999987666688999999999999999999999998


Q ss_pred             c-cEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHchhhhhhcCCCCCCccEEEEecceee
Q 019093          241 R-KFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLPRNTSKIKLTKIPWKV  319 (346)
Q Consensus       241 I-d~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~~~~l~~lv~~~s~nPAki~gl~~kdAdlvi~d~~~~v  319 (346)
                      | |+ ||||||||+.++|..++..+|++|+|+++|+++++++++++|++++++||.||||||||+.+++.|++++++|+|
T Consensus       240 i~d~-iatDHaPh~~e~K~~~~~~~g~~g~e~~l~l~l~~~~~~~~L~~lv~~~S~nPaki~gL~~~kg~I~~~~~~~~v  318 (343)
T d2eg6a1         240 NRVF-LGTDSAPHARHRKESSCGCAGCFNAPTALGSYATVFEEMNALQHFEAFCSVNGPQFYGLPVNDTFIELVREEQQV  318 (343)
T ss_dssp             TTEE-ECCCBCCCCHHHHSSTTBCCCCCCTTTHHHHHHHHHHHTTCGGGHHHHHHTHHHHHHTCCCCCSEEEEECCCEEC
T ss_pred             Ceee-eecCCCCcccccccccccccccCChHHHHHHHHHHHHhcCCHHHHHHHHhHhHHHHhCCCCCCCeEEEecCceec
Confidence            8 67 999999999999987666679999999999999988888999999999999999999995446788888899999


Q ss_pred             cCCccccCCcccccCC-CcEEEEEEE
Q 019093          320 PEAFSFSFGDIIPMFA-GNTLEWQPS  344 (346)
Q Consensus       320 ~~~~~~s~~~~sp~~~-G~~l~G~v~  344 (346)
                      +++.+.|+++|||| . |++|+|+|.
T Consensus       319 ~~~~~~sk~~~tPf-~~g~~l~w~vk  343 (343)
T d2eg6a1         319 AESIALTDDTLVPF-LAGETVRWSVK  343 (343)
T ss_dssp             CSCEECSSSEECCT-TTTCEESCEEC
T ss_pred             CccccCCCCCeEec-CCCCccceeeC
Confidence            99999999999999 7 999999984

>d1nfga2 c.1.9.6 (A:52-381) D-hydantoinase {Burkholderia pickettii [TaxId: 329]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase), catalytic domain
domain: D-hydantoinase
species: Burkholderia pickettii [TaxId: 329]

Probab=100.00  E-value=1.6e-71  Score=528.47  Aligned_cols=287  Identities=13%  Similarity=0.107  Sum_probs=243.8

Q ss_pred             CccccceecCC---CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCC
Q 019093            7 QPDDWHLHLRD---GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTD   78 (346)
Q Consensus         7 G~ID~HvH~r~---g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~   78 (346)
                      |+||+|||+|+   |.+++|||+|+|     ||||||++|||+.|++++.+.++.+.+++++.+.  +||++++.+  +.
T Consensus         1 G~ID~HvH~r~p~~g~~~~Ed~~tgs~AAa~GGvTtv~~mpn~~p~~~~~e~~~~~~~~a~~~s~--~d~~~~~~~--~~   76 (330)
T d1nfga2           1 GGIDVHTHVETVSFNTQSADTFATATVAAACGGTTTIVDFCQQDRGHSLAEAVAKWDGMAGGKSA--IDYGYHIIV--LD   76 (330)
T ss_dssp             CEEEEEECCSCEETTEECSCCHHHHHHHHHHTTEEEEEEEEECCTTSCHHHHHHHHHHHHTTTCS--SEEEEEEEC--SS
T ss_pred             CcEeCccCCCCCCCCccccchHHHHHHHHHcCCCEEEEECCCCCCCCCCHHHHHHHHHHHhcCCe--eeecceEEE--ec
Confidence            89999999998   457899999975     9999999999999999999999998888766554  899998876  32


Q ss_pred             CC--CHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC---------C--
Q 019093           79 TT--SPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV---------D--  145 (346)
Q Consensus        79 ~~--~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~---------~--  145 (346)
                      ..  ..+|+..+.+.| +++||+||++    +...+.|. ..++++|++++++|.++++||||+.++.         +  
T Consensus        77 ~~~~~~~el~~~~~~G-v~~~k~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~h~E~~~~~~~~~~~~~~~g~~  150 (330)
T d1nfga2          77 PTDSVIEELEVLPDLG-ITSFKVFMAY----RGMNMIDD-VTLLKTLDKAVKTGSLVMVHAENGDAADYLRDKFVAEGKT  150 (330)
T ss_dssp             CCHHHHHHTTTGGGGT-CCEEEEESSS----TTTTBCCH-HHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHHTTCC
T ss_pred             cchhhHHHHhhhhhhc-ccceeeeccc----cccCCCCc-HHHHHHHHHHHhcCCceeechHHHHHHHHHhhhhhccCCc
Confidence            21  234666677788 8999999964    22334455 7899999999999999999999976531         1  


Q ss_pred             ---------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccCC-C
Q 019093          146 ---------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQGG-L  213 (346)
Q Consensus       146 ---------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~~-~  213 (346)
                               +..+|..++.|++  .+++.+|+|+||+|+||++++++|+++|  |.+||||||||||+||++++...+ .
T Consensus       151 ~~~~~~~~rp~~aE~~av~r~~--~la~~~~~~lhi~HiSt~~~~~~i~~ak~~g~~vt~Et~ph~L~l~~~d~~~~~~~  228 (330)
T d1nfga2         151 APIYHALSRPPRVEAEATARAL--ALAEIVNAPIYIVHVTCEESLEEVMRAKSRGVRALAETCTHYLYLTKEDLERPDFE  228 (330)
T ss_dssp             STHHHHHTSCHHHHHHHHHHHH--HHHHHHTCCEEECCCCSHHHHHHHHHHHHHTCCEEECEEGGGGTCCGGGGGCTTTG
T ss_pred             CchhcccccChHHHHHHHHHHH--HHHHHhCCeeeechhcchHHHHHHHHHHhcCCcccccccchhhhhhhhhhhccccc
Confidence                     1458999999999  8999999999999999999999999998  899999999999999999987532 2


Q ss_pred             CCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccc----cccCCCC--CCccchhHHHHHHHHHHHh-cCCH
Q 019093          214 RPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGR----KECACGC--AGIYNAPVALSLYAKVFEE-MGAL  286 (346)
Q Consensus       214 ~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~----K~~~~~~--~G~~g~e~~lp~l~~~~~~-~~~l  286 (346)
                      ++++|||||||+++||++||++|+||+||+ |+||||||+.++    |..+|..  +|++|+|++||+||+.+.+ +++|
T Consensus       229 ~~~~k~~PPLR~~~d~~aL~~~l~dG~Id~-i~SDHaP~~~~~~~~~~~~~f~~ap~G~~gle~~lp~l~~~v~~~~l~l  307 (330)
T d1nfga2         229 GAKYVFTPPARAKKDHDVLWNALRNGVFET-VSSDHCSWLFKGHKDRGRNDFRAIPNGAPGVEERLMMVYQGVNEGRISL  307 (330)
T ss_dssp             GGGGCCSSCCCCHHHHHHHHHHHHTTCCSC-EECCBCCCCTTTTTTTTTTCGGGSCCCBCCTTTHHHHHHHHHHTTSSCH
T ss_pred             CceeeecCcCCcHHHHHHHhhhhcCCceee-ecCCCCCccchhhHhhccCCHhHCCCCcCHHHHHHHHHHHHHHcCCCCH
Confidence            578999999999999999999999999999 999999998643    3334543  5999999999999985444 3589


Q ss_pred             HHHHHHHchhhhhhcCC-CCC
Q 019093          287 DKLEAFTSFNGPDFYGL-PRN  306 (346)
Q Consensus       287 ~~lv~~~s~nPAki~gl-~~k  306 (346)
                      +++++++|+||||+||| |+|
T Consensus       308 ~~~v~~~S~nPAki~gL~p~K  328 (330)
T d1nfga2         308 TQFVELVATRPAKVFGMFPQK  328 (330)
T ss_dssp             HHHHHHHTHHHHHHTTCTTTS
T ss_pred             HHHHHHHHHHHHHHhCCCCCC
Confidence            99999999999999999 765

>d1gkra2 c.1.9.6 (A:55-379) L-hydantoinase {Arthrobacter aurescens [TaxId: 43663]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase), catalytic domain
domain: L-hydantoinase
species: Arthrobacter aurescens [TaxId: 43663]

Probab=100.00  E-value=3.9e-71  Score=524.79  Aligned_cols=287  Identities=18%  Similarity=0.195  Sum_probs=250.9

Q ss_pred             CccccceecCC-Cccccc-cccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCC
Q 019093            7 QPDDWHLHLRD-GDLLKA-VVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDT   79 (346)
Q Consensus         7 G~ID~HvH~r~-g~~~ke-~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~   79 (346)
                      |+||+|||+|+ |.++|| +|+|+|     ||||||++||||.|++++.+.++.+.+++++.+.  +||++|+++  +++
T Consensus         1 G~ID~HvH~repg~~~ke~~~~tgs~AAa~GGvTtv~~mPnt~P~~~~~~~~~~~~~~a~~~~~--~d~~~~~~~--~~~   76 (325)
T d1gkra2           1 GVVDEHVHIIDMDLKNRYGRFELDSESAAVGGITTIIEMPITFPPTTTLDAFLEKKKQAGQRLK--VDFALYGGG--VPG   76 (325)
T ss_dssp             CEEEEEEECCCGGGTTTSCCHHHHHHHHHHHTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCS--SEEEEEEEC--CTT
T ss_pred             CcEeCCcCCCCCCCCCcccHHHHHHHHHHccCCceEEECCCCCCCcCCHHHHHHHHHHhccCCc--ccccccccc--ccc
Confidence            89999999999 888887 699875     9999999999999999999999999998887766  999999876  543


Q ss_pred             CCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC------------C--
Q 019093           80 TSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV------------D--  145 (346)
Q Consensus        80 ~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~------------~--  145 (346)
                       +.+++.++.+.| +.+||.|+.+..+. .....++ +.++++|++++++|.++++||||.+++.            +  
T Consensus        77 -~~~~~~~~~~~g-~~~~~~~~~~~~~~-~~~~~~d-~~l~~~~~~~~~~~~~~~~H~E~~~l~~~~~~~~~~~g~~~~~  152 (325)
T d1gkra2          77 -NLPEIRKMHDAG-AVGFKSMMAASVPG-MFDAVSD-GELFEIFQEIAACGSVIVVHAENETIIQALQKQIKAAGGKDMA  152 (325)
T ss_dssp             -CHHHHHHHHHTT-CCEEEEESSCSBTT-TBCBCCH-HHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHHTTCCSHH
T ss_pred             -cHHHHHhhhhcc-cceeccccccccCC-ccccccH-HHHHHHHHHHHhcCCceEeccCcHHHHHHHHHHhhhcCCcccc
Confidence             677888888889 78999998653222 2223345 7899999999999999999999987641            1  


Q ss_pred             ------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccCCCCCce
Q 019093          146 ------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQGGLRPHN  217 (346)
Q Consensus       146 ------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~~~~~~~  217 (346)
                            ...+|..++.|.+  .+++.+|+|+||+|+||++++++|+++|  |.+||||||||||+||++++..  +++++
T Consensus       153 ~~~~~rp~~aE~~~v~r~~--~la~~~~~~~hi~hiSs~~~l~~i~~ak~~g~~vt~et~ph~L~lt~~~~~~--~~~~~  228 (325)
T d1gkra2         153 AYEASQPVFQENEAIQRAL--LLQKEAGCRLIVLHVSNPDGVELIHQAQSEGQDVHCESGPQYLNITTDDAER--IGPYM  228 (325)
T ss_dssp             HHHHHSCHHHHHHHHHHHH--HHHHHHCCEEEECCCCSHHHHHHHHHHHHTTCCEEEEECHHHHSCCGGGHHH--HGGGG
T ss_pred             cccccCchHHHHHHHHHHH--HHhhhcCcceeccccccHHHHHhhhhhhhcCCceEEeecccccccchhhhhc--cCccc
Confidence                  1358999999999  8999999999999999999999999998  8999999999999999999875  46899


Q ss_pred             EEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCC---C--CCCccchhHHHHHHHHHHHhc--CCHHHHH
Q 019093          218 YCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECAC---G--CAGIYNAPVALSLYAKVFEEM--GALDKLE  290 (346)
Q Consensus       218 k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~---~--~~G~~g~e~~lp~l~~~~~~~--~~l~~lv  290 (346)
                      |||||||+++||++||++|++|+||+ |+||||||+.++|+.++   +  .+|++|+|++||++|+.++++  ++|++++
T Consensus       229 k~~PPlR~~~Dr~aL~~al~~G~id~-i~SDHaPh~~~~K~~~~~~~~~a~~G~~g~e~~lp~~~~~~v~~g~lsl~~~v  307 (325)
T d1gkra2         229 KVAPPVRSAEMNIRLWEQLENGLIDT-LGSDHGGHPVEDKEPGWKDVWKAGNGALGLETSLPMMLTNGVNKGRLSLERLV  307 (325)
T ss_dssp             CCSSCCCCHHHHHHHHHHHHHTCCCE-ECCCEECCCGGGTGGGGTCGGGSCCCBCCTTTHHHHHHHHTGGGTSSCHHHHH
T ss_pred             ccchhhhhhhhhHHHHHHHhcCcceE-EecCCCCCCHHHhccCCCccccCCCCcccHHHHHHHHHHHHHHcCCCCHHHHH
Confidence            99999999999999999999999999 89999999999997643   2  359999999999999765554  4899999


Q ss_pred             HHHchhhhhhcCC-CCC
Q 019093          291 AFTSFNGPDFYGL-PRN  306 (346)
Q Consensus       291 ~~~s~nPAki~gl-~~k  306 (346)
                      ++||.||||+||| |+|
T Consensus       308 ~~~s~nPAki~gl~p~K  324 (325)
T d1gkra2         308 EVMCEKPAKLFGIYPQK  324 (325)
T ss_dssp             HHHTHHHHHHHTCTTTS
T ss_pred             HHHhHHHHHHhCCCCCC
Confidence            9999999999999 765

>d1ynya2 c.1.9.6 (A:53-384) D-hydantoinase {Bacillus sp. AR9 [TaxId: 301298]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase), catalytic domain
domain: D-hydantoinase
species: Bacillus sp. AR9 [TaxId: 301298]

Probab=100.00  E-value=1.7e-70  Score=521.91  Aligned_cols=288  Identities=15%  Similarity=0.122  Sum_probs=247.0

Q ss_pred             CccccceecCC---CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCC
Q 019093            7 QPDDWHLHLRD---GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTD   78 (346)
Q Consensus         7 G~ID~HvH~r~---g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~   78 (346)
                      |+||+|||+|+   |.+++|||+|+|     ||||||++||||.|++++.+.++.+++++++.+.  +||++++++  ++
T Consensus         1 G~ID~HvH~r~p~~g~~~~ed~~tgs~AAa~GGvTtv~~mpnt~p~~~~~~~~~~~~~~a~~~~~--~d~~~~~~~--~~   76 (332)
T d1ynya2           1 GGIDPHTHLDMPFGGTVTADDFFTGTRAAAFGGTTSIVDFCLTKKGESLKSAIATWHEKARGKAV--IDYGFHLMI--AE   76 (332)
T ss_dssp             CEEEEEECTTCEETTEECSCCHHHHHHHHHHTTEEEEEEEECCCSSCCHHHHHHHHHHHHTTTCS--SEEEEEEEC--SC
T ss_pred             CceeCccCCCCCCCCCcccccHHHHHHHHHhCCCcEEEECCCCCCCCCCHHHHHHHHHHHhccCc--cceeeEEEE--ec
Confidence            89999999997   688999999875     9999999999999999999999999988876555  899999876  44


Q ss_pred             CC--CHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC------------
Q 019093           79 TT--SPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV------------  144 (346)
Q Consensus        79 ~~--~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~------------  144 (346)
                      ..  ...|+..+.+.+++.+||+|+.+    ++..+.|+ ..++++|++++++|+++++||||.+++.            
T Consensus        77 ~~~~~~~el~~~~~~~g~~~~k~~~~~----~~~~~~d~-~~l~~~l~~~~~~~~~~~~h~Ed~~~~~~~~~~~~~~g~~  151 (332)
T d1ynya2          77 ANDQVLEELESVISSEGITSLKVFMAY----KNVFQADD-ETLFKTLVKAKELGALVQVHAENGDVLDYLTKKALAEGNT  151 (332)
T ss_dssp             CCHHHHHHHHHHHHTSCCCEEEEESCS----TTTTCCCH-HHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCC
T ss_pred             cccchhHHHHHHHhhhcccceeeeecc----ccccccCH-HHHHHHHHHHhhcCCEEeechhhHHHHHHHHHHHHhcCCC
Confidence            31  23467777766558999999853    23345566 8899999999999999999999976531            


Q ss_pred             --------ChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccCC-C
Q 019093          145 --------DIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQGG-L  213 (346)
Q Consensus       145 --------~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~~-~  213 (346)
                              .+..+|.+++.|.+  .+++++|+|+||+|+||++++++|+++|  |.+||||||||||+||++++...+ .
T Consensus       152 ~~~~~~~~~p~~aE~~ai~r~~--~la~~~g~~~hi~hiSt~~~~~~i~~ak~~g~~vt~e~~ph~L~l~~~~~~~~~~~  229 (332)
T d1ynya2         152 DPIYHAYTRPPEAEGEATGRAI--ALTALAGSQLYVVHVSCASAVQRIAEAREKGWNVYGETCPQYLALDVSIMDQPDFE  229 (332)
T ss_dssp             STTHHHHTSCHHHHHHHHHHHH--HHHHHHTCCEEECSCCSHHHHHHHHHHHHTTCCEEEEECHHHHHCCGGGGCCSSSG
T ss_pred             CchhccccchhhHHHHHHHHHH--HhhhhhcccccccccccchHHHHHHHHHHhCCCceeccccccccCCHHHHhhhhcc
Confidence                    11468999999999  8999999999999999999999999998  899999999999999999987532 2


Q ss_pred             CCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCcccccc----CCC--CCCccchhHHHHHHHHHHHhc--CC
Q 019093          214 RPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKEC----ACG--CAGIYNAPVALSLYAKVFEEM--GA  285 (346)
Q Consensus       214 ~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~----~~~--~~G~~g~e~~lp~l~~~~~~~--~~  285 (346)
                      ++++|||||||+++||++||++|++|+||+ |+|||+||+.++|..    +|.  .+|++|+|++||+||+.++++  ++
T Consensus       230 g~~~k~~PPLRs~~dr~aL~~al~~G~id~-i~SDHaP~~~~~kk~~~~~~f~~a~~G~~g~e~~l~~~~~~~v~~g~ls  308 (332)
T d1ynya2         230 GAKYVWSPPLREKWNQEVLWSALKNGILQT-VGSDHCPFNFRGQKELGRGDFTKIPNGGPLIEDRLTILYSEGVRQGRIS  308 (332)
T ss_dssp             GGGGCCSSCCCCTTHHHHHHHHHHTTSSCE-ECCCBCCCCTTTTGGGGTTCGGGSCCCBCCTTTHHHHHHHHTTTTTSSC
T ss_pred             CceeEecCccccHHHHHHHHHHHhcCCeeE-EEecCCCCCHHHHhhccCCCcccCCCccchHHHHHHHHHHHHHHcCCCC
Confidence            588999999999999999999999999999 999999999877642    344  359999999999999865543  58


Q ss_pred             HHHHHHHHchhhhhhcCC-CCC
Q 019093          286 LDKLEAFTSFNGPDFYGL-PRN  306 (346)
Q Consensus       286 l~~lv~~~s~nPAki~gl-~~k  306 (346)
                      |+++++++|.||||+||| |+|
T Consensus       309 l~~~v~~~s~nPAki~GL~p~K  330 (332)
T d1ynya2         309 LNQFVDISSTKAAKLFGMFPRK  330 (332)
T ss_dssp             HHHHHHHHTHHHHHHTTCTTTS
T ss_pred             HHHHHHHHhHHHHHHhCCCCCC
Confidence            999999999999999999 765

>d2ftwa2 c.1.9.6 (A:60-393) Dihydropyrimidine amidohydrolase Pyd2 {Dictyostelium discoideum [TaxId: 44689]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase), catalytic domain
domain: Dihydropyrimidine amidohydrolase Pyd2
species: Dictyostelium discoideum [TaxId: 44689]

Probab=100.00  E-value=3.9e-70  Score=519.72  Aligned_cols=289  Identities=13%  Similarity=0.071  Sum_probs=245.4

Q ss_pred             cCccccceecCC---CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeC
Q 019093            6 TQPDDWHLHLRD---GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLT   77 (346)
Q Consensus         6 PG~ID~HvH~r~---g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~   77 (346)
                      ||+||+|||||+   |.++||||+|+|     ||||||++|||+.|+.++.+.++.+++++++.+.  |||.+++++  +
T Consensus         1 PG~ID~HvH~reP~~G~~~kEd~~tgs~AAa~GGvTtv~~mpn~~p~~~~~~~~~~~~~~a~~~~~--~d~~~~~~~--~   76 (334)
T d2ftwa2           1 PGGIDTHTHFQLPFMGTVSVDDFDIGTQAAVAGGTTFIIDFVIPTRGQSLLEAYDQWKKWADEKVN--CDYSLHVAI--T   76 (334)
T ss_dssp             ECEEEEEECTTCEETTEECSSCHHHHHHHHHHTTEEEEEEEECCCTTCCHHHHHHHHHHHHHTTCS--SEEEEEEEC--C
T ss_pred             CCeEcceecCCCCCCCCcccccHHHHHHHHHhCCCeEEEECCCCCCCCCcHHHHHHHHHHHhcCCc--ceeeEEEee--c
Confidence            999999999998   688999999875     9999999999999999999999999888876655  999999886  4


Q ss_pred             CCC--CHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC-----------
Q 019093           78 DTT--SPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV-----------  144 (346)
Q Consensus        78 ~~~--~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~-----------  144 (346)
                      .+.  ...|+..|.+.+++.+||+|+.+   ..+..+ ++ +.++++|++++++|+++++||||..++.           
T Consensus        77 ~~~~~~~~e~~~l~~~~g~~~~k~~~~~---~~~~~~-~~-~~l~~~~~~~~~~~~~~~~H~E~~~~~~~~~~~~~~~g~  151 (334)
T d2ftwa2          77 WWSEQVSREMEILVKERGVNSFKCFMAY---KNSFMV-TD-QEMYHIFKRCKELGAIAQVHAENGDMVFEGQKKMLEMGI  151 (334)
T ss_dssp             SCCHHHHHHHHHHHHHSCCCEEEEESSC---TTTTBC-CH-HHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTC
T ss_pred             CcchhhhHhHHHHHHhcCccccceeecc---cccccc-cc-HHHHHHHHHHhhcCCceeecchhHHHHhhcchhhhccCC
Confidence            321  23466666654348999999864   222334 44 7899999999999999999999977531           


Q ss_pred             -C--------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccCC-
Q 019093          145 -D--------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQGG-  212 (346)
Q Consensus       145 -~--------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~~-  212 (346)
                       +        ...+|..++.|++  .+++++|+|+||+||||++++++|+++|  |.+||||||||||+||++++...+ 
T Consensus       152 ~~~~~~~~~rp~~aE~~~v~r~~--~la~~~~~~lhi~HiSt~~~~~~i~~ak~~G~~vt~e~~ph~L~l~~~~~~~~d~  229 (334)
T d2ftwa2         152 TGPEGHELSRPEALEAEATNRAI--VIADSVCTPVYIVHVQSIGAADVICKHRKEGVRVYGEPIAAGLGVDGSHMWNHDW  229 (334)
T ss_dssp             CSTHHHHHHSCTHHHHHHHHHHH--HHHHHHTCCEEECSCCCHHHHHHHHHHHHTTCCEEECCBHHHHHCCGGGGGCSSH
T ss_pred             CCcccccccCcHHHHHHHHHHHH--HHHHhhccceeeccccchhhhhhHHHhcccCCceeeccccceeeccHHHHhccch
Confidence             1        1358999999999  8999999999999999999999999998  899999999999999999886421 


Q ss_pred             -CCCceEEeCCCCCh-hhHHHHHHHHHcCCccEEeecCCCCCCcccccc---CCC--CCCccchhHHHHHHHHHHHhc--
Q 019093          213 -LRPHNYCLPVLKRE-IHRQAVVSAVTSGSRKFFLGTDSAPHERGRKEC---ACG--CAGIYNAPVALSLYAKVFEEM--  283 (346)
Q Consensus       213 -~~~~~k~~PPLR~~-~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~---~~~--~~G~~g~e~~lp~l~~~~~~~--  283 (346)
                       .+..+||+||||++ +||++||++|.+|+||+ |+||||||+.++|..   +|.  .+|++|+|++||+||+.++++  
T Consensus       230 ~~~~~~~~~PPlR~~~~d~~~L~~~l~~G~Id~-iaSDHaPh~~e~K~~~~~~f~~a~~Gi~glet~lpll~~~~v~~g~  308 (334)
T d2ftwa2         230 RHAAAFVMGPPIRPDPRTKGVLMDYLARGDLDC-VGTDNCTFCADQKAMGKDDFTKIPNGVNGVEDRMSIVWENGVNTGK  308 (334)
T ss_dssp             HHHHTTCCSSCCCCCTTHHHHHHHHHHHTSSCC-CBCCBCCCCHHHHGGGTTCGGGSCCCBCCTTTHHHHHHHHHTTTTS
T ss_pred             hhccceEeeccccccHhhhhhHHHHhhCCCccc-eecCCCCCCHHHHhcCCCChhhCCCCccCHHHHHHHHHHHHHHcCC
Confidence             13578999999975 68999999999999999 999999999999975   344  359999999999999866554  


Q ss_pred             CCHHHHHHHHchhhhhhcCC-CCC
Q 019093          284 GALDKLEAFTSFNGPDFYGL-PRN  306 (346)
Q Consensus       284 ~~l~~lv~~~s~nPAki~gl-~~k  306 (346)
                      ++|++++++||.|||||||| |+|
T Consensus       309 lsl~~~v~~~s~nPAki~gL~p~K  332 (334)
T d2ftwa2         309 LTWCQFVRATSSERARIFNIYPRK  332 (334)
T ss_dssp             SCHHHHHHHHTHHHHHHTTCTTTS
T ss_pred             CCHHHHHHHHhHHHHHHhCCCCCC
Confidence            48999999999999999999 765

>d1kcxa2 c.1.9.6 (A:67-400) Dihydropyrimidinase related protein-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase), catalytic domain
domain: Dihydropyrimidinase related protein-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.1e-69  Score=513.58  Aligned_cols=291  Identities=13%  Similarity=0.069  Sum_probs=246.9

Q ss_pred             cCccccceecCC---CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeC
Q 019093            6 TQPDDWHLHLRD---GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLT   77 (346)
Q Consensus         6 PG~ID~HvH~r~---g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~   77 (346)
                      ||+||+|||+|+   |.++||||+|+|     ||||||++||||.|++++.+.++.++++++..+.  |||.+++++...
T Consensus         1 PG~ID~HvH~reP~~G~~~kEd~~tgs~AAa~GGvTtv~~mPnt~P~~~~~~~~~~~~~~a~~~s~--~d~~~~~~~~~~   78 (334)
T d1kcxa2           1 PGGIDVNTYLQKPSQGMTSADDFFQGTKAALAGGTTMIIDHVVPEPGSSLLTSFEKWHEAADTKSC--CDYSLHVDITSW   78 (334)
T ss_dssp             ECEEEEEECTTCEETTEECSSCHHHHHHHHHHTTEEEEEEEECCCTTCCHHHHHHHHHHHHHHHCS--SEEEEEEEECCC
T ss_pred             CCeEeeeecCCCCCCCCcccchHHHHHHHHHcCCceEEEECCCCCCCCCCHHHHHHHHHHhcccCc--ceeeEeeeeccC
Confidence            999999999998   688999999986     9999999999999999999999999998887776  999999988321


Q ss_pred             CCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC---------C---
Q 019093           78 DTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV---------D---  145 (346)
Q Consensus        78 ~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~---------~---  145 (346)
                      .+...+++.++.+.+++.+||+||++    ++....++ ..++++|+++++.|+++++||||.++..         +   
T Consensus        79 ~~~~~~el~~l~~~~g~~~~ki~~~~----~~~~~~~~-~~l~~~~~~~~~~~~~v~~H~Ed~~l~~~~~~~~~~~g~~~  153 (334)
T d1kcxa2          79 YDGVREELEVLVQDKGVNSFQVYMAY----KDLYQMSD-SQLYEAFTFLKGLGAVILVHAENGDLIAQEQKRILEMGITG  153 (334)
T ss_dssp             CTTHHHHHHHHHHTTCCCEEEEESCS----TTTTCCCH-HHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHTTCCS
T ss_pred             CcchHHHHHHHHHhccCceeeeeecc----CCCcccCH-HHHHHHHHHHhccCceeEEecCCHHHHhccccchhhcCCcc
Confidence            12235678888765448999999863    22333455 8899999999999999999999987531         1   


Q ss_pred             --------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccCCC--
Q 019093          146 --------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQGGL--  213 (346)
Q Consensus       146 --------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~~~--  213 (346)
                              +..+|..++.|++  .+++++|+|+||+||||++++++|+++|  |.++|||||||||+|+.+++...++  
T Consensus       154 ~~~~~~~rp~~aE~~ai~r~~--~la~~~g~~~hi~HiSt~~~ve~i~~ak~~g~~vt~e~~~~~l~l~~~~~~~~~~~~  231 (334)
T d1kcxa2         154 PEGHALSRPEELEAEAVFRAI--AIAGRINCPVYITKVMSKSAADIIALARKKGPLVFGEPIAASLGTDGTHYWSKNWAK  231 (334)
T ss_dssp             THHHHHHSCTHHHHHHHHHHH--HHHHHHTCCEEEEEECCHHHHHHHHHHHHHSCCEEEEEBHHHHHCCGGGGGCSSHHH
T ss_pred             hhhccCCCCHHHHHHHHHHHH--HHHhhcCCceeeccccchHHHHHHHHHhccccceeeccchhheeecccccccCChhH
Confidence                    1358999999999  8999999999999999999999999998  8999999999999999988864321  


Q ss_pred             CCceEEeCCCC-ChhhHHHHHHHHHcCCccEEeecCCCCCCccccccC---CC--CCCccchhHHHHHHHHHHHhc--CC
Q 019093          214 RPHNYCLPVLK-REIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECA---CG--CAGIYNAPVALSLYAKVFEEM--GA  285 (346)
Q Consensus       214 ~~~~k~~PPLR-~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~---~~--~~G~~g~e~~lp~l~~~~~~~--~~  285 (346)
                      +..++++||+| +++||++||++|++|+||+ |+|||+||+.++|..+   |.  .+|++|+|++||+||+.++++  ++
T Consensus       232 ~~~~~~~pPlr~~~~d~eaL~~~l~~G~Id~-I~SDHaP~~~e~K~~~~~~f~~ap~Gi~g~e~~l~~llt~~V~~g~is  310 (334)
T d1kcxa2         232 AAAFVTSPPLSPDPTTPDYLTSLLACGDLQV-TGSGHCPYSTAQKAVGKDNFTLIPEGVNGIEERMTVVWDKAVATGKMD  310 (334)
T ss_dssp             HHHTCCSSCCCSCTTHHHHHHHHHHHTSSCC-CBCCBCCCCHHHHGGGSSCGGGSCCCBCCTTTHHHHHHHHHTTTTSSC
T ss_pred             hcceEeeeccCchhhhHHHHHHHhhcCCcce-EecCCCCCCHHHhccCCCChhhCCCCcccHHHHHHHHHHHHHHcCCCC
Confidence            13466777776 6889999999999999999 9999999999999754   43  359999999999999865543  59


Q ss_pred             HHHHHHHHchhhhhhcCC-CCC
Q 019093          286 LDKLEAFTSFNGPDFYGL-PRN  306 (346)
Q Consensus       286 l~~lv~~~s~nPAki~gl-~~k  306 (346)
                      |++++++||.||||+||| |+|
T Consensus       311 l~~~v~~~s~nPA~i~gL~p~K  332 (334)
T d1kcxa2         311 ENQFVAVTSTNAAKIFNLYPRK  332 (334)
T ss_dssp             HHHHHHHHTHHHHHHHTCTTTS
T ss_pred             HHHHHHHHHHHHHHHhCCCCCC
Confidence            999999999999999999 765

>d2fvka2 c.1.9.6 (A:57-440) Dihydropyrimidine amidohydrolase Pyd2 {Yeast (Saccharomyces kluyveri) [TaxId: 4934]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase), catalytic domain
domain: Dihydropyrimidine amidohydrolase Pyd2
species: Yeast (Saccharomyces kluyveri) [TaxId: 4934]

Probab=100.00  E-value=7.5e-69  Score=519.19  Aligned_cols=288  Identities=13%  Similarity=0.121  Sum_probs=232.0

Q ss_pred             CccccceecCC-Cc---cccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHH-HHh-h-CCCCccEEEEEEE
Q 019093            7 QPDDWHLHLRD-GD---LLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRES-ILK-A-LPASSNFTPLMTL   74 (346)
Q Consensus         7 G~ID~HvH~r~-g~---~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~-~~~-~-~~~~vd~~~~~~~   74 (346)
                      |+||+|||+|+ |.   +++|||+|+|     ||||||++|||+.|+.++++.+....+. ..+ . ..+.|||++|+.+
T Consensus         1 G~ID~HvH~rePg~~~~~~~ed~~tgs~AAa~GGvTtvi~mp~~~p~~~~~~~~~~~~~~~~~~~a~~~~~vdy~~~~~~   80 (384)
T d2fvka2           1 GGIDAHVHVDEPLKLLGDVVDTMEHATRSAVAGGTTTVVAFSTQDVSKKGPSALAESVKLDVDEYSEQTLYCDYGLHLIL   80 (384)
T ss_dssp             CEEECCBCCCCTTCTTSCCSCCHHHHHHHHHHTTEEEEEEEEECCTTCCSTTHHHHHHHHHHHHHTTSCCSSEEEEEEEC
T ss_pred             CceeCCcCCCCCCCCCCcccchHHHHHHHHHcCCceEEEECCCCCCCCCCHHHHHHHHHHHHHHHHhcCccceeeEEEEE
Confidence            89999999999 64   7899999876     9999999999999998876655443322 111 1 1123999999876


Q ss_pred             EeCCCC-CH---HHHHH------HHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC
Q 019093           75 YLTDTT-SP---DEIKL------ARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV  144 (346)
Q Consensus        75 ~~~~~~-~~---~el~~------l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~  144 (346)
                        +... ..   .|+.+      +...| |.+||+||.+    +...+ ++ +.++++|+++++.|.++++||||.+++.
T Consensus        81 --~~~~~~~~~~~el~~~~~~~~~~~~G-v~~~k~f~~~----~~~~~-~~-~~l~~~l~~~~~~g~~v~~H~Ed~~~~~  151 (384)
T d2fvka2          81 --FQIEKPSVEARELLDVQLQAAYNDYG-VSSVKMFMTY----PGLQI-SD-YDIMSAMYATRKNGFTTMLHAENGDMVK  151 (384)
T ss_dssp             --CCCCSSHHHHHHHHHHHHHHHHHHHC-CCEEEEESSS----TTTBC-CH-HHHHHHHHHHHHTTCEEEEECCCHHHHH
T ss_pred             --eCCCCccchHHHHHhHHHHHHcccCc-ccccceeccc----ccccc-CH-HHHHHHHHHHHhcCCceeeccccHHHHH
Confidence              2211 11   23322      23457 8999999864    22334 44 7899999999999999999999977541


Q ss_pred             ---------C-----------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhc
Q 019093          145 ---------D-----------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLV  202 (346)
Q Consensus       145 ---------~-----------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~  202 (346)
                               +           +..+|.+++.+++  .+|+++|+|+||+|+||++++++|+++|  |.+||||||||||+
T Consensus       152 ~~~~~~~~~g~~~~~~~~~~rP~~aE~~av~r~~--~la~~~g~~lhi~HiSt~~~ve~I~~ak~~G~~Vt~Et~ph~L~  229 (384)
T d2fvka2         152 WMIEALEEQGLTDAYYHGVSRPSIVEGEATNRAI--TLATTMDTPILFVHVSSPQAAEVIKQAQTKGLKVYAETCPQYAL  229 (384)
T ss_dssp             HHHHHHHHTTCCSTTHHHHTSCHHHHHHHHHHHH--HHHHHTTCCEEECSCCCHHHHHHHHHHHHHTCCEEEEECHHHHH
T ss_pred             HHHHHHhhcCCCChhhcccccccchhhHHHHHHH--HHHHhcCceEEecccccchhhHHHHHhhhcCCCEEEEeChHHhh
Confidence                     1           1358999999999  8999999999999999999999999998  89999999999999


Q ss_pred             cchhhhcc----------------------------CCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCc
Q 019093          203 LNRNALFQ----------------------------GGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHER  254 (346)
Q Consensus       203 l~~~~~~~----------------------------~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~  254 (346)
                      ||++.+..                            ..+|+++|||||||+++||++||++|++|+||+ |+||||||+.
T Consensus       230 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~~~k~~PPLR~~~dr~aL~~~l~dG~Id~-IaSDHaP~~~  308 (384)
T d2fvka2         230 LSDAITRCHHHGEVESYGVGIDLSSISESPFTNPDDRFIGSKYICSPPIRPEGTQKSIWKGMNNGTFTI-VGSDHCSYNY  308 (384)
T ss_dssp             CCGGGGSCC--------CCSCCGGGSSSSTTTCTTCTTGGGGGCCSSCCCCTTSHHHHHHHHHHTSCSE-ECCCBCCCBS
T ss_pred             ccchhhcccccccccccccccccccccccccccccccccCceeEEcCCCCCHHHHHHHHHHhhCCceeE-EecCCCCCCH
Confidence            99885421                            113588999999999999999999999999999 9999999999


Q ss_pred             cccccC----------------CC--CCCccchhHHHHHHHHHHHh--cC-CHHHHHHHHchhhhhhcCC-CCC
Q 019093          255 GRKECA----------------CG--CAGIYNAPVALSLYAKVFEE--MG-ALDKLEAFTSFNGPDFYGL-PRN  306 (346)
Q Consensus       255 ~~K~~~----------------~~--~~G~~g~e~~lp~l~~~~~~--~~-~l~~lv~~~s~nPAki~gl-~~k  306 (346)
                      ++|..+                |.  ++|++|+|++||+||+..+.  +. +|++++++||+||||+||| |+|
T Consensus       309 ~eK~~~~~~~~~~~~~~~~~~df~~ap~G~~gle~~lpll~~~~v~~~~~~sl~~lv~~~s~nPAki~Gl~p~K  382 (384)
T d2fvka2         309 YEKTSTASKHRAFDPENNKNGEFRYIPNGLPGVCTRMPLLYDYGYLRGNLTSMMKLVEIQCTNPAKVYGMYPQK  382 (384)
T ss_dssp             SCCSSTTBGGGGEEGGGTEESCGGGSCCCBCCTTTHHHHHHHHTTTTTSSSCHHHHHHHHTHHHHHHTTCTTTS
T ss_pred             HHhcccccccccccccccccCccccCCCCCccHHHHHHHHHHHHHhcCCCCCHHHHHHHHhHHHHHHhCCCCCC
Confidence            999642                43  24999999999999985433  33 7999999999999999999 776

>d1gkpa2 c.1.9.6 (A:55-389) D-hydantoinase {Thermus sp. [TaxId: 275]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase), catalytic domain
domain: D-hydantoinase
species: Thermus sp. [TaxId: 275]

Probab=100.00  E-value=4.4e-68  Score=505.83  Aligned_cols=288  Identities=15%  Similarity=0.092  Sum_probs=245.7

Q ss_pred             ccccceecCC---CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCC
Q 019093            8 PDDWHLHLRD---GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDT   79 (346)
Q Consensus         8 ~ID~HvH~r~---g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~   79 (346)
                      +||+|||+|+   +..+||||+|+|     ||||||++|||+.|+.++.+.++.+++++++.+.  |||++|+++.....
T Consensus         1 lID~HvH~~~p~~~~~~ked~~sgs~AAa~GGvTtv~dmpn~~p~~~~~~~~~~~~~~a~~~~~--~d~~~~~~~~~~~~   78 (335)
T d1gkpa2           1 FIDPHVHIYLPFMATFAKDTHETGSKAALMGGTTTYIEMCCPSRNDDALEGYQLWKSKAEGNSY--CDYTFHMAVSKFDE   78 (335)
T ss_dssp             EEEEEECSSCEETTEECSCCHHHHHHHHHHTTEEEEEEEECCCTTSCHHHHHHHHHHHHTTTCS--SEEEEEEECCCCCT
T ss_pred             CcCcccccCCCCCCCccccHHHHHHHHHHhCCCeEEEECCCCCCCCChHHHHHHHHHHHhcCCc--cceeeEEEEecccc
Confidence            6999999998   355799999975     9999999999999999999999998888766555  99999988731112


Q ss_pred             CCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC------------C--
Q 019093           80 TSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV------------D--  145 (346)
Q Consensus        80 ~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~------------~--  145 (346)
                      ....+|.+|.+.| +++||+|+++    .+....|+ ..++++|+++++.|.++++||||..+..            +  
T Consensus        79 ~~~~el~~l~~~G-~~~~k~~~~~----~~~~~~d~-~~l~~~~~~~~~~~~~v~~h~ed~~l~~~~~~~~~~~~~~~~~  152 (335)
T d1gkpa2          79 KTEGQLREIVADG-ISSFKIFLSY----KNFFGVDD-GEMYQTLRLAKELGVIVTAHCENAELVGRLQQKLLSEGKTGPE  152 (335)
T ss_dssp             THHHHHHHHHHTT-CCEEEEEECS----TTTTBCCH-HHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHTTCCSGG
T ss_pred             ccHHHHHHHHhhh-cccccccccc----CCCccCCH-HHHHHHHHHhhhcCCEEEEcCCcHHHHHHHHhhhhcccccCcc
Confidence            2356888999999 8999999963    22333455 8999999999999999999999976531            1  


Q ss_pred             ------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccCC-CCCc
Q 019093          146 ------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQGG-LRPH  216 (346)
Q Consensus       146 ------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~~-~~~~  216 (346)
                            ...+|.+++.+++  .+++++|+|+||+|+||++++++|+++|  |.+||||||||||+|+++++.+.+ ++.+
T Consensus       153 ~~~~~~p~~~E~~av~r~~--~la~~~~~~~hi~HiSt~~~l~~i~~ak~~g~~it~e~~~~hl~l~~~~~~~~~~~~~~  230 (335)
T d1gkpa2         153 WHEPSRPEAVEAEGTARFA--TFLETTGATGYVVHLSCKPALDAAMAAKARGVPIYIESVIPHFLLDKTYAERGGVEAMK  230 (335)
T ss_dssp             GTTTTSCHHHHHHHHHHHH--HHHHHHTCEEEECSCCSHHHHHHHHHHHHTTCCEEEEEEHHHHHCCGGGGGSCHHHHHT
T ss_pred             ccccchhhhhHHHHHHHHH--HHHHHhCcccchhhhhhhhhhhhhhhhhhcCceEEeecccchhhcCHHHHhcCCchhcc
Confidence                  1368999999999  8999999999999999999999999998  899999999999999999887532 1247


Q ss_pred             eEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCcccccc---CCC--CCCccchhHHHHHHHHHHHhc--CCHHHH
Q 019093          217 NYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKEC---ACG--CAGIYNAPVALSLYAKVFEEM--GALDKL  289 (346)
Q Consensus       217 ~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~---~~~--~~G~~g~e~~lp~l~~~~~~~--~~l~~l  289 (346)
                      +|||||||+++||++||++|++|+||+ |+|||+||+.++|..   +|.  .+|++|+|++||+||+.++++  ++|+++
T Consensus       231 ~k~~PPlRs~~d~~~L~~al~~G~id~-i~SDHaP~~~e~K~~~~~~~~~~~~G~~gle~~lplll~~~V~~g~lsl~~~  309 (335)
T d1gkpa2         231 YIMSPPLRDKRNQKVLWDALAQGFIDT-VGTDHCPFDTEQKLLGKEAFTAIPNGIPAIEDRVNLLYTYGVSRGRLDIHRF  309 (335)
T ss_dssp             TCCSSCCCCTHHHHHHHHHHHTTSSCE-EECCBCCCCHHHHGGGSSCGGGSCCCBCCTTTHHHHHHHHHTTSSSCCHHHH
T ss_pred             eecccCCCCHHHHHHHHHHHhcCCccE-EEecCCCCCHHHhccCCCChhhCCCChhHHHHHHHHHHHHHHHcCCCCHHHH
Confidence            899999999999999999999999999 999999999999964   343  359999999999999866554  489999


Q ss_pred             HHHHchhhhhhcCC-CCC
Q 019093          290 EAFTSFNGPDFYGL-PRN  306 (346)
Q Consensus       290 v~~~s~nPAki~gl-~~k  306 (346)
                      +++||.||||+||| ++|
T Consensus       310 v~~~S~nPAri~Gl~~~K  327 (335)
T d1gkpa2         310 VDAASTKAAKLFGLFPRK  327 (335)
T ss_dssp             HHHHTHHHHHHTTCTTTS
T ss_pred             HHHHHHHHHHHhCCCCCC
Confidence            99999999999999 664

>d1xrta2 c.1.9.6 (A:56-365) Two-domain dihydroorotase {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase), catalytic domain
domain: Two-domain dihydroorotase
species: Aquifex aeolicus [TaxId: 63363]

Probab=100.00  E-value=3e-68  Score=501.43  Aligned_cols=282  Identities=21%  Similarity=0.260  Sum_probs=213.5

Q ss_pred             CccccceecCC-CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeC-CC
Q 019093            7 QPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLT-DT   79 (346)
Q Consensus         7 G~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~-~~   79 (346)
                      |+||+|||+|+ |.+++|||+|+|     ||||||++|||+.|++++.+.++.++++++..+.  +||.++++++.. .+
T Consensus         1 G~ID~HvHlr~PG~~~~ed~~tgs~AAa~GGvTtv~~mPnt~P~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~   78 (310)
T d1xrta2           1 GFIDIHVHLRDPGQTYKEDIESGSRCAVAGGFTTIVCMPNTNPPIDNTTVVNYILQKSKSVGL--CRVLPTGTITKGRKG   78 (310)
T ss_dssp             CEEEEEECCCTTTCTTTCCHHHHHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCS--SEEEECBCSBGGGCS
T ss_pred             CcEeCcccCCCCCccccccHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHhhccCC--cccccceeeccCCcc
Confidence            89999999999 999999999976     9999999999999999999999988888777665  899988776311 11


Q ss_pred             CCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCC--------------
Q 019093           80 TSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVD--------------  145 (346)
Q Consensus        80 ~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~--------------  145 (346)
                      ....++..+...|    +|.|+.     .+....|+ ..++++|++++++|.++++||||..+..+              
T Consensus        79 ~~~~~~~~~~~~g----~~~f~~-----~~~~~~d~-~~l~~~~~~~~~~~~~~~~h~e~~~~~~~~~~~~~~~~~~~~~  148 (310)
T d1xrta2          79 KEIADFYSLKEAG----CVAFTD-----DGSPVMDS-SVMRKALELASQLGVPIMDHCEDDKLAYGVINEGEVSALLGLS  148 (310)
T ss_dssp             SSBCCHHHHHHHT----CCCBCC-----TTSCCCCH-HHHHHHHHHHHHHTCEEEECCCGGGGTC---------------
T ss_pred             chhhhhhhcccCc----EEEEEC-----CCCCccCH-HHHHHHHHHhhhhhhhhhhccchhhhhhhhhhhhhcccccCcc
Confidence            1334566665555    355653     23344566 89999999999999999999999776421              


Q ss_pred             --hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccCCCCCceEEeC
Q 019093          146 --IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQGGLRPHNYCLP  221 (346)
Q Consensus       146 --~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~P  221 (346)
                        +..+|..++.|.+  .+++++|+|+||+|+||++++++|+++|  |.+||||||||||+|+++++..  .++++||+|
T Consensus       149 ~rp~~~E~~ai~r~~--~la~~~~~~~~i~HiSt~~~l~~i~~a~~~g~~vt~e~~ph~L~l~~~~~~~--~~~~~k~~P  224 (310)
T d1xrta2         149 SRAPEAEEIQIARDG--ILAQRTGGHVHIQHVSTKLSLEIIEFFKEKGVKITCEVNPNHLLFTEREVLN--SGANARVNP  224 (310)
T ss_dssp             -----CHHHHHHHHH--HHHHHHCCEEEESCCCSHHHHHHHHHHHHTTCCEEEEECGGGGC-------------------
T ss_pred             ccchHHHHHHHHHHH--HHHhhcCCeeeccccchHHHHHHHHHHHHcCCceecchHHHHhhcccccccc--ccchhhhcc
Confidence              1358889999999  8999999999999999999999999988  8999999999999999999864  468999999


Q ss_pred             CCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccC-CCCCCccchhHHHHHHHHHHHhc-CCHHHHHHHHchhhhh
Q 019093          222 VLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECA-CGCAGIYNAPVALSLYAKVFEEM-GALDKLEAFTSFNGPD  299 (346)
Q Consensus       222 PLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~-~~~~G~~g~e~~lp~l~~~~~~~-~~l~~lv~~~s~nPAk  299 (346)
                      |||+++||++||++|++|+||+ |+||||||+.++|+.. +..+|++|+|++||++|+.+.++ ++|+++++++|+||||
T Consensus       225 plR~~~d~~aL~~al~~G~id~-i~SDHaPh~~~~K~~~~~~~~G~~g~e~~lp~l~~~v~~g~l~l~~~v~~~s~npAk  303 (310)
T d1xrta2         225 PLRKKEDRLALIEGVKRGIIDC-FATDHAPHQTFEKELVEFAMPGIIGLQTALPSALELYRKGIISLKKLIEMFTINPAR  303 (310)
T ss_dssp             -----CCHHHHHHHHHHTCSCE-ECCCBCCCCC-----------CCCCGGGHHHHHHHHHHTTSSCHHHHHHHHTHHHHH
T ss_pred             cCCCHHHHHHHHHHHhcCCCeE-EecCCCCCCHHHccCcccCCCCceeHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence            9999999999999999999999 8999999999999642 23469999999999999865554 4999999999999999


Q ss_pred             hcCCCC
Q 019093          300 FYGLPR  305 (346)
Q Consensus       300 i~gl~~  305 (346)
                      +|||+.
T Consensus       304 i~gL~~  309 (310)
T d1xrta2         304 IIGVDL  309 (310)
T ss_dssp             HHTCSC
T ss_pred             HhCCCC
Confidence            999964

>d1i0da_ c.1.9.3 (A:) Phosphotriesterase (parathion hydrolase, PTE) {Pseudomonas diminuta [TaxId: 293]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Phosphotriesterase-like
domain: Phosphotriesterase (parathion hydrolase, PTE)
species: Pseudomonas diminuta [TaxId: 293]

Probab=99.95  E-value=8.7e-30  Score=236.15  Aligned_cols=176  Identities=10%  Similarity=0.023  Sum_probs=140.5

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEE
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAA  194 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~  194 (346)
                      ..+.+.++.++++|.++.+|+....       .+.+.+.+.+  ..+...+.++||+|+++.++++.+++++  |..+++
T Consensus       148 ~~~~~~~~~a~~~g~pv~~h~~~~~-------~~~~~~~~~~--~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~g~~v~~  218 (331)
T d1i0da_         148 LVLKAAARASLATGVPVTTHTAASQ-------RDGEQQAAIF--ESEGLSPSRVCIGHSDDTDDLSYLTALAARGYLIGL  218 (331)
T ss_dssp             HHHHHHHHHHHHHCCCEEEECCGGG-------THHHHHHHHH--HHTTCCGGGEEECSGGGCCCHHHHHHHHHTTCEEEE
T ss_pred             HHHHHHHHHHHHhCCeEEeeccchh-------hhhhhhhhhh--hhcccCCcceEEEecCCcchHHHHHHHHhcCCceee
Confidence            4577788889999999999998642       3445566666  6788899999999999989999998887  889999


Q ss_pred             EccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCcccc---ccCCCCCCccchhH
Q 019093          195 TVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRK---ECACGCAGIYNAPV  271 (346)
Q Consensus       195 Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K---~~~~~~~G~~g~e~  271 (346)
                      |+||||+++..++....  +...+++||+|.+.+|++||+++.|+.  + ++|||.+.+...+   .......|++|+++
T Consensus       219 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~r~~~~~~~l~~g~~d~i--~-~~tD~p~~~p~~~~~~~~~~~~~g~~g~~~  293 (331)
T d1i0da_         219 DHIPHSAIGLEDNASAS--ALLGIRSWQTRALLIKALIDQGYMKQI--L-VSNDWLFGFSSYVTNIMDVMDRVNPDGMAF  293 (331)
T ss_dssp             CCTTCCCTTCTTCHHHH--HHHCSSCHHHHHHHHHHHHHTTCGGGE--E-ECCCCCSEECSSSTTHHHHHHHHCTTGGGH
T ss_pred             cceeeeccchhhhcccc--CCccCCChhhhHHHHHHHHHhcCCCCE--E-ECCCCCCcccccccCCCccccccCCCcHHH
Confidence            99999999998877542  467889999999999988888876532  6 8999955433222   11112248899999


Q ss_pred             HHHHHHHHHHhcC-CHHHHHHHHchhhhhhcCC-CCC
Q 019093          272 ALSLYAKVFEEMG-ALDKLEAFTSFNGPDFYGL-PRN  306 (346)
Q Consensus       272 ~lp~l~~~~~~~~-~l~~lv~~~s~nPAki~gl-~~k  306 (346)
                      .++.++..+.+++ +++++.++++.||||+||| |+|
T Consensus       294 ~l~~~~~~~~~~gis~e~i~~i~~~NParlf~l~~k~  330 (331)
T d1i0da_         294 IPLRVIPFLREKGVPQETLAGITVTNPARFLSPTLRA  330 (331)
T ss_dssp             HHHTHHHHHHHTTCCHHHHHHHHTHHHHHHHSCCCCC
T ss_pred             HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCCCC
Confidence            9999987766665 9999999999999999999 554

>d1onwa2 c.1.9.13 (A:63-346) Isoaspartyl dipeptidase, catalytic domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Isoaspartyl dipeptidase, catalytic domain
domain: Isoaspartyl dipeptidase, catalytic domain
species: Escherichia coli [TaxId: 562]

Probab=99.73  E-value=5.1e-18  Score=151.02  Aligned_cols=266  Identities=11%  Similarity=-0.040  Sum_probs=134.4

Q ss_pred             CccccceecCC-Cc---ccccccccc-----CCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeC
Q 019093            7 QPDDWHLHLRD-GD---LLKAVVPHS-----VSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLT   77 (346)
Q Consensus         7 G~ID~HvH~r~-g~---~~ke~~~s~-----sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~   77 (346)
                      |+||+|||++. +.   ...++++..     .|||||+++||++.|...+.+.+..+.+.......  ..|.........
T Consensus         1 GlID~HvHl~~~~~~~~~~~~~~~~~~~~~l~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~   78 (284)
T d1onwa2           1 GFIDQHVHLIGGGGEAGPTTRTPEVALSRLTEAGVTSVVGLLGTDSISRHPESLLAKTRALNEEGI--SAWMLTGAYHVP   78 (284)
T ss_dssp             CEEEEEECTTCCBCTTSGGGBCCCCCHHHHHHTTEEEEEECCCSCCSSCCHHHHHHHHHHHHHHTS--EEEEEEECSCSS
T ss_pred             CEEEeccCCCCCCCCcccchhhHHHHHHHHHhCCeEEEecCCCCCChHhHHHHHHHHHHHHhhcCe--eEEEecccccCC
Confidence            89999999986 22   234555443     39999999999999999888887777766655442  334322221111


Q ss_pred             CCCCHHHH-HHHHHcCCeeEEEEeecCCccCCCCCccCh--H---HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHH
Q 019093           78 DTTSPDEI-KLARKTGVVFAVKLYPAGATTNSQDGVTDL--F---GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREK  151 (346)
Q Consensus        78 ~~~~~~el-~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~--~---~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~  151 (346)
                      ........ ..........+.+......    .....+.  .   ....+........+.++..|.....-         
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------  145 (284)
T d1onwa2          79 SRTITGSVEKDVAIIDRVIGVKCAISDH----RSAAPDVYHLANMAAESRVGGLLGGKPGVTVFHMGDSKK---------  145 (284)
T ss_dssp             CCCSSSCHHHHHHHCTTEEEEEEEESST----TSCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEEECSCTT---------
T ss_pred             cccccccchhhhhccchhhhhhhhhHHH----HhhccchHHHHhHHHHHHHHhhccccCCceeccccccHH---------
Confidence            11111111 1111111133333322110    0011111  0   11223333444556777777654321         


Q ss_pred             HHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHH
Q 019093          152 VFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQA  231 (346)
Q Consensus       152 ~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~a  231 (346)
                       .+.+++  ..++..+.+++..+.+.            .....++.++++.+..+....   .......++......+..
T Consensus       146 -~~~~~~--~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~  207 (284)
T d1onwa2         146 -ALQPIY--DLLENCDVPISKLLPTH------------VNRNVPLFEQALEFARKGGTI---DITSSIDEPVAPAEGIAR  207 (284)
T ss_dssp             -TTHHHH--HHHHTCCCCGGGEEEEC------------GGGSHHHHHHHHHHHHTTCCE---EEETTCCSSSCHHHHHHH
T ss_pred             -HHHHHH--HHHHhcCCEEEEecccc------------cccccccHHHHHHHHhcCCee---hhhccCCCccCCHHHHHH
Confidence             122333  34555555444332221            000111222222221111000   000001122233455666


Q ss_pred             HHHHHHcCCccEEeecCCCCCCccccccCCCC-CCccchhHHHHHHHHHHHh-cCCHHHHHHHHchhhhhhcCCCCC
Q 019093          232 VVSAVTSGSRKFFLGTDSAPHERGRKECACGC-AGIYNAPVALSLYAKVFEE-MGALDKLEAFTSFNGPDFYGLPRN  306 (346)
Q Consensus       232 L~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~-~G~~g~e~~lp~l~~~~~~-~~~l~~lv~~~s~nPAki~gl~~k  306 (346)
                      +|+....+.+.+ ++|||+++....|...... +|.++.+.+++.++....+ ..++++++++++.||||+|||+.|
T Consensus       208 ~~~~~~~~~~~~-~~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gls~~~al~~aT~npAr~lGL~~k  283 (284)
T d1onwa2         208 AVQAGIPLARVT-LSSDGNGSQPFFDDEGNLTHIGVAGFETLLETVQVLVKDYDFSISDALRPLTSSVAGFLNLTGK  283 (284)
T ss_dssp             HHHTTCCGGGEE-EECCBTCC-------------CCCCSHHHHHHHHHHHHHHCCCHHHHHGGGTHHHHHHTTCTTC
T ss_pred             HHHhCCCCceEE-EEeccccccccccccccccCCCCChHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCCC
Confidence            777777777888 8999999987776543332 4888899999988765544 569999999999999999999643

>d2icsa2 c.1.9.14 (A:55-321) Putative adenine deaminase EF0837 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Adenine deaminase-like
domain: Putative adenine deaminase EF0837
species: Enterococcus faecalis [TaxId: 1351]

Probab=99.13  E-value=1.8e-10  Score=98.21  Aligned_cols=37  Identities=14%  Similarity=-0.114  Sum_probs=28.7

Q ss_pred             CccccceecCC-Cccccccccc--cCCceeEEEeCCCCCC
Q 019093            7 QPDDWHLHLRD-GDLLKAVVPH--SVSHYGRAIVMPNLKP   43 (346)
Q Consensus         7 G~ID~HvH~r~-g~~~ke~~~s--~sGGvTtvv~mPnt~p   43 (346)
                      |+||+|||+++ +..++++...  ..+|||||++|++..+
T Consensus         1 GlID~H~H~~~~~~~~~~~~~~~~l~~GvTTv~d~~~~~~   40 (267)
T d2icsa2           1 GWIDDHVHCFEKMALYYDYPDEIGVKKGVTTVIDAGTTGA   40 (267)
T ss_dssp             CEEEEEECCCTTSSSSCCCHHHHTGGGTEEEEEEESSSCT
T ss_pred             CeEEeCcCCCCCCCcchhhHHHHHhCCeeEEEECCCCCCh
Confidence            89999999988 5666665543  4599999999976543

>d1m7ja3 c.1.9.11 (A:62-419) N-acyl-D-aminoacid amidohydrolase, catalytic domain {Alcaligenes faecalis [TaxId: 511]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: D-aminoacylase, catalytic domain
domain: N-acyl-D-aminoacid amidohydrolase, catalytic domain
species: Alcaligenes faecalis [TaxId: 511]

Probab=99.09  E-value=1e-09  Score=102.82  Aligned_cols=178  Identities=16%  Similarity=0.128  Sum_probs=106.2

Q ss_pred             CccccceecCCCccccccc-cccCCceeEEEeCCCCC---CCC-----------------CcHHHHHHHHHHHHhhCCCC
Q 019093            7 QPDDWHLHLRDGDLLKAVV-PHSVSHYGRAIVMPNLK---PPI-----------------TTTAAAVAYRESILKALPAS   65 (346)
Q Consensus         7 G~ID~HvH~r~g~~~ke~~-~s~sGGvTtvv~mPnt~---p~~-----------------~~~~~~~~~~~~~~~~~~~~   65 (346)
                      ||||+|+|........... .+..=||||+|.. |+.   .|+                 -+-+++..|.+.+.+... .
T Consensus         1 GFID~HtH~D~~~~~~p~~~~~~~~GVTT~v~G-ncG~s~aP~~~~~~~~~~~~l~~g~~~~w~t~~eyl~~le~~~~-~   78 (358)
T d1m7ja3           1 GFIDSHTHDDNYLLKHRDMTPKISQGVTTVVTG-NCGISLAPLAHANPPAPLDLLDEGGSFRFARFSDYLEALRAAPP-A   78 (358)
T ss_dssp             CEEESSCCCTTHHHHCTTCHHHHTTTEEEEEES-CTTCCSCSEECSSCCTTGGGGCSSSCCEESSHHHHHHHHHHSCC-S
T ss_pred             CceecCCCCchhhccCCCCcccccCCCceEEEe-CCCCCcccCCcccccchHHHhccCCCcCcCCHHHHHHHHHhcCC-c
Confidence            8999999964311111111 2334799998864 221   000                 011234567776655432 3


Q ss_pred             ccEEEEEEEE-e-----C---CCCCHHHHHHH-------HHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHc
Q 019093           66 SNFTPLMTLY-L-----T---DTTSPDEIKLA-------RKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQ  129 (346)
Q Consensus        66 vd~~~~~~~~-~-----~---~~~~~~el~~l-------~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~  129 (346)
                      +|++.+++-. +     .   .....+||.+|       .++|+ .||-.=..|..  +  ...+. ++|.++.+.+++.
T Consensus        79 ~Nva~~vgH~~lR~~vmg~~~~~at~~ei~~M~~ll~eal~~GA-~G~Stgl~y~P--~--~~A~~-~El~~lak~~~~~  152 (358)
T d1m7ja3          79 VNAACMVGHSTLRAAVMPDLRREATADEIQAMQALADDALASGA-IGISTGAFYPP--A--AHAST-EEIIEVCRPLITH  152 (358)
T ss_dssp             SEEEEEEEHHHHHHHHCSCCSSCCCHHHHHHHHHHHHHHHHHTC-CEEEEETTSGG--G--TTCCH-HHHHHHHTHHHHH
T ss_pred             cceeeecccccccccccCcccccCCHHHHHHHHHHHHHHHhcCC-cccccCCcccc--c--ccCCH-HHHHHHHHHHHhc
Confidence            7877654421 0     1   11134555444       35784 67754222211  1  11245 7899999999999


Q ss_pred             CCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCC---------HHHHHHHHccC-CCeeEEEccch
Q 019093          130 NMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITT---------MDAVKFVESCK-EGFVAATVTPQ  199 (346)
Q Consensus       130 g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt---------~~~l~~i~~ak-g~~vt~Et~ph  199 (346)
                      |.++..|.-+..-      ...+++..++  .+++.+|+|+||+|+.+         .+.++++.+++ |.+|++++-|.
T Consensus       153 g~~~~~h~r~~~~------~~~~~~~e~~--~~a~~~g~~~~ish~~~~~~~~~~~~~~~~~~~~~a~~G~~i~~d~yPy  224 (358)
T d1m7ja3         153 GGVYATHMRDEGE------HIVQALEETF--RIGRELDVPVVISHHKVMGKLNFGRSKETLALIEAAMASQDVSLDAYPY  224 (358)
T ss_dssp             TCEEEEECSCSST------THHHHHHHHH--HHHHHHTSCEEECSCCCCSGGGTTTHHHHHHHHHHHHHHSCEEEEECSC
T ss_pred             CCeeeeeeccccc------cHHHHHHHHH--HHHHHcCCceEecccccCCCcchhhHHHHHHHHHHHhcCCCcceeecCc
Confidence            9999999876431      2233556666  68888999999999853         34556777766 88999999994


Q ss_pred             h
Q 019093          200 H  200 (346)
Q Consensus       200 ~  200 (346)
                      -
T Consensus       225 ~  225 (358)
T d1m7ja3         225 V  225 (358)
T ss_dssp             S
T ss_pred             c
Confidence            3

>d1xrta1 b.92.1.3 (A:1-55,A:366-422) Two-domain dihydroorotase {Aquifex aeolicus [TaxId: 63363]}

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase)
domain: Two-domain dihydroorotase
species: Aquifex aeolicus [TaxId: 63363]

Probab=99.02  E-value=6.7e-11  Score=92.51  Aligned_cols=59  Identities=14%  Similarity=0.206  Sum_probs=49.8

Q ss_pred             HHHHHHHHchhhhhhcCCCC----------CCccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEE
Q 019093          286 LDKLEAFTSFNGPDFYGLPR----------NTSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL  345 (346)
Q Consensus       286 l~~lv~~~s~nPAki~gl~~----------kdAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~  345 (346)
                      +.++.+.++.+||+++.+..          .+|||+|||  ++|+++.++++|+++|||| +|++++|+|.+
T Consensus        31 I~~I~~~i~~~~a~viD~~g~~~~~~l~~G~~ADl~i~Dp~~~~~v~~~~~~Sk~~nspf-~g~~l~G~v~~  101 (112)
T d1xrta1          31 IKKIDKNILVPEAEIIDAKGLIVCPTLKLGSPADITIFDPNKEWILNEETNLSKSRNTPL-WGKVLKGKVIY  101 (112)
T ss_dssp             EEEEESSCCCSSEEEEECTTSEEEECCCTTSBCCEEEEEEEEEEECSTTTCCSSCCCCTT-TTCEEEEEEEE
T ss_pred             EEEeecCCCcccceEEehhcccccceeecccceEEEEecCCccEEECHHHccCcCCCcee-cCCEEeeEEEE
Confidence            34455667889999984321          289999999  9999999999999999999 79999999986

>d1o12a2 c.1.9.10 (A:44-331) N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain
domain: N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain
species: Thermotoga maritima [TaxId: 2336]

Probab=98.91  E-value=1.1e-10  Score=103.21  Aligned_cols=54  Identities=13%  Similarity=-0.019  Sum_probs=40.9

Q ss_pred             CccccceecCC-Ccccccccccc-----CCceeEEEeCCCCCCCCCcHHHHHHHHHHHHh
Q 019093            7 QPDDWHLHLRD-GDLLKAVVPHS-----VSHYGRAIVMPNLKPPITTTAAAVAYRESILK   60 (346)
Q Consensus         7 G~ID~HvH~r~-g~~~ke~~~s~-----sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~   60 (346)
                      |+||+|||+++ +...++++.+.     .||||||++|||+.|.....+.++...+....
T Consensus         1 GlID~HvH~~~~~~~~~~~~~~~~~~~l~~GvTTv~~~~~t~~~~~~~~~~~~~~~~~~~   60 (288)
T d1o12a2           1 GFVDPHIHGVVGADTMNCDFSEMEEFLYSQGVTTFLATTVSTSLEKMKEILRKARDYILE   60 (288)
T ss_dssp             CEEEEEECEETTEETTTTCHHHHHHHHHTTTEEEEEEECCSCCHHHHHHHHHHHHHHHHH
T ss_pred             CeEEecccCCCCCccccccHHHHHHHHHhCCeEEEcCCCCCCCHHHHHHHHHHHHHHHHh
Confidence            89999999998 56667777653     49999999999998765555556655555544

>d1kcxa1 b.92.1.3 (A:15-66,A:401-490) Dihydropyrimidinase related protein-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase)
domain: Dihydropyrimidinase related protein-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.81  E-value=1.3e-09  Score=88.35  Aligned_cols=52  Identities=8%  Similarity=-0.082  Sum_probs=45.0

Q ss_pred             HchhhhhhcCCCCC--------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEE
Q 019093          293 TSFNGPDFYGLPRN--------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL  345 (346)
Q Consensus       293 ~s~nPAki~gl~~k--------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~  345 (346)
                      .+.+||++++...+        |||++|||  .+|+|++++++|+++|||| +|++++|+|.+
T Consensus        36 ~~~~~a~vIDa~G~~v~~~~G~dAdl~i~Dp~~~~~i~~~~~~sk~~~tpf-~G~~~~G~v~~   97 (142)
T d1kcxa1          36 IVPGGVKTIEANGRMVIIAVGSDADVVIWDPDKMKTITAKSHKSTVEYNIF-EGMECHGSPLV   97 (142)
T ss_dssp             CSCSSCEEEECTTCEEECCTTSBCCEEEEEEEEEEECCTTTCSSSSSCCTT-TTCEEEEEEEE
T ss_pred             CCCccceeechhhcceeecccccceEEEEeccceEEEcchhccccCCccCC-cCCEEEEEEEE
Confidence            34578888766322        99999999  8999999999999999999 79999999986

>d2ftwa1 b.92.1.3 (A:7-59,A:394-490) Dihydropyrimidine amidohydrolase Pyd2 {Dictyostelium discoideum [TaxId: 44689]}

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase)
domain: Dihydropyrimidine amidohydrolase Pyd2
species: Dictyostelium discoideum [TaxId: 44689]

Probab=98.76  E-value=2.5e-09  Score=87.46  Aligned_cols=53  Identities=8%  Similarity=-0.024  Sum_probs=46.5

Q ss_pred             HHchhhhhhcCCCCC--------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEE
Q 019093          292 FTSFNGPDFYGLPRN--------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL  345 (346)
Q Consensus       292 ~~s~nPAki~gl~~k--------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~  345 (346)
                      +.+.++++++++..+        |||++|||  .+|+|++++++|+++|||| +|++++|+|.+
T Consensus        36 i~~~~~~~iida~gk~v~i~~G~dad~~i~dp~~~~~i~~~~~~sk~~~spf-eG~~~~G~v~~   98 (150)
T d2ftwa1          36 IEPKEGIKVVDATDKLLLIDVGCDGDIVIWDPNQSKTISKDTHHHAVDFNIF-EGIKVTGIAVT   98 (150)
T ss_dssp             CCCCSSCCEEECTTCEEECSTTSBCCEEEEEEEEEEECCTTTCCCSSSCCTT-TTCEEEEEEEE
T ss_pred             CCCCCccEEEecccceeeeecCccCceEEEecCceEEEeccccccccccccC-cCCEEEEEEeE
Confidence            345689999877332        99999999  8999999999999999999 79999999986

>d1bf6a_ c.1.9.3 (A:) Phosphotriesterase homology protein {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Phosphotriesterase-like
domain: Phosphotriesterase homology protein
species: Escherichia coli [TaxId: 562]

Probab=98.54  E-value=5.4e-07  Score=80.89  Aligned_cols=150  Identities=13%  Similarity=0.117  Sum_probs=83.3

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEE
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAA  194 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~  194 (346)
                      ..+...++.++++|+||.+|+.+...        +..+...+  .-......++++.|..-..+++.++++-  |..+..
T Consensus       138 ~~f~~~~~~A~~~~lPv~iH~r~~~~--------~~e~~~~l--~~~~~~~~~~~~~H~~f~~~~e~~~~~~~~G~~i~~  207 (291)
T d1bf6a_         138 KVFIAAALAHNQTGRPISTHTSFSTM--------GLEQLALL--QAHGVDLSRVTVGHCDLKDNLDNILKMIDLGAYVQF  207 (291)
T ss_dssp             HHHHHHHHHHHHHCCCEEEECGGGCS--------HHHHHHHH--HHTTCCGGGEEECCCCSSCCHHHHHHHHHTTCEEEE
T ss_pred             HHHHHHHHHHHHhCCCeEEeccchhh--------hHHHHHHH--HHhCCCcccceecccCCCCCHHHHHHHHhcCeeEEe
Confidence            45777888899999999999986421        11111222  1122234567888983223344444332  444433


Q ss_pred             EccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCcc-EEeecCCCCCCccccccCCCCCCccchhHHH
Q 019093          195 TVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRK-FFLGTDSAPHERGRKECACGCAGIYNAPVAL  273 (346)
Q Consensus       195 Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id-~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~l  273 (346)
                      ....                + ++. +|  .....+.+.+.++.+-.| ++++|| +|+..-.+.     .|-+|....+
T Consensus       208 ~g~~----------------~-~~~-~~--~~~~~~~~~~lv~~~p~drilleTD-~p~~~p~~~-----~g~~~~~~~~  261 (291)
T d1bf6a_         208 DTIG----------------K-NSY-YP--DEKRIAMLHALRDRGLLNRVMLSMD-ITRRSHLKA-----NGGYGYDYLL  261 (291)
T ss_dssp             CCTT----------------C-TTT-SC--HHHHHHHHHHHHHTTCGGGEEECCC-CCSGGGSGG-----GTSCCTTHHH
T ss_pred             cccc----------------c-ccC-Cc--HHHhHHHHHHHHHhCCchhEEEecC-CCCcccccc-----CCCCCchhHH
Confidence            3222                0 111 22  123345667777777777 337888 576322211     1333443445


Q ss_pred             HHHHHHHHhcC-CHHHHHHHHchhhhhhcC
Q 019093          274 SLYAKVFEEMG-ALDKLEAFTSFNGPDFYG  302 (346)
Q Consensus       274 p~l~~~~~~~~-~l~~lv~~~s~nPAki~g  302 (346)
                      +.+...+.+++ +.+++.+++..||+|+|.
T Consensus       262 ~~~~~~l~~~g~s~e~i~~i~~~Np~rlf~  291 (291)
T d1bf6a_         262 TTFIPQLRQSGFSQADVDVMLRENPSQFFQ  291 (291)
T ss_dssp             HTHHHHHHHTTCCHHHHHHHHTHHHHHHCC
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHHcC
Confidence            44443334454 899999999999999983

>d1gkra1 b.92.1.3 (A:1-54,A:380-451) L-hydantoinase {Arthrobacter aurescens [TaxId: 43663]}

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase)
domain: L-hydantoinase
species: Arthrobacter aurescens [TaxId: 43663]

Probab=98.45  E-value=5.3e-08  Score=77.24  Aligned_cols=38  Identities=21%  Similarity=0.219  Sum_probs=36.5

Q ss_pred             CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEE
Q 019093          307 TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL  345 (346)
Q Consensus       307 dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~  345 (346)
                      |||++|||  .+|+++++.++|+++|||| +|++++|+|.+
T Consensus        61 DAD~~l~Dp~~~~~v~~~~~~sk~~~tpf-~G~~~~G~v~~  100 (126)
T d1gkra1          61 DADLLILDLDIDTKVDASQFRSLHKYSPF-DGMPVTGAPVL  100 (126)
T ss_dssp             BCCEEEEESCCCEECCGGGCSSSCCCCTT-TTCEECCEEEE
T ss_pred             cchhheeccccceeccHHHHHhhhccccc-CCcEEEeEEEE
Confidence            99999999  8999999999999999999 79999999976

>d2dvta1 c.1.9.15 (A:1-325) Thermophilic reversible gamma-resorcylate decarboxylase {Rhizobium sp. MTP-10005 [TaxId: 267998]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: PP1699/LP2961-like
domain: Thermophilic reversible gamma-resorcylate decarboxylase
species: Rhizobium sp. MTP-10005 [TaxId: 267998]

Probab=98.42  E-value=1.5e-06  Score=79.07  Aligned_cols=107  Identities=12%  Similarity=0.143  Sum_probs=62.8

Q ss_pred             cEEEEEEEEeCCCC---CHHHHHHHHHcCCeeEEEEeecCCccCC--CCCccChHHHHHHHHHHhHHcCCcEEEecCCCC
Q 019093           67 NFTPLMTLYLTDTT---SPDEIKLARKTGVVFAVKLYPAGATTNS--QDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTD  141 (346)
Q Consensus        67 d~~~~~~~~~~~~~---~~~el~~l~~~G~v~~~Kif~~~~~~~~--~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~  141 (346)
                      .|..++.+  .+..   ..+|+.+.++..+..|+|+...+.....  ...+.|  ..+..+++.++++|++|.+|+.+..
T Consensus        94 Rf~~~~~v--~~~~~~~a~~el~r~~~~~g~~Gv~l~~~~~~~~~~~~~~~~d--~~~~pi~~~~~e~~lpv~iH~~~~~  169 (325)
T d2dvta1          94 RFLAFAAL--PLQDPDAATEELQRCVNDLGFVGALVNGFSQEGDGQTPLYYDL--PQYRPFWGEVEKLDVPFYLHPRNPL  169 (325)
T ss_dssp             TEEEEECC--CTTSHHHHHHHHHHHHHTTCCCEEEEESSBCCTTCCSCBCTTS--GGGHHHHHHHHHHTCCEEEECCCCC
T ss_pred             eEEEEEEc--cccccchhhhhhhhhhhcccceEEEEeCCCcCCCCCCcccccC--cccchHHHHHhhCCceEEEecCCCC
Confidence            57665554  3321   2356777666533789999764211111  112334  6789999999999999999987643


Q ss_pred             CCC------Ch--------h-hhHHHHHHHH-HHHHHHhCCCCcEEEEccCC
Q 019093          142 PIV------DI--------F-DREKVFIDTI-LQPLIQRLPQLKVVMEHITT  177 (346)
Q Consensus       142 ~~~------~~--------~-~~E~~av~~~-l~~~la~~~g~~lhi~HvSt  177 (346)
                      ...      ..        . .....++..+ +...+.+++++|+.+.|...
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~r~P~Lk~v~~H~gg  221 (325)
T d2dvta1         170 PQDSRIYDGHPWLLGPTWAFAQETAVHALRLMASGLFDEHPRLNIILGHMGE  221 (325)
T ss_dssp             GGGCGGGTTCGGGSGGGTHHHHHHHHHHHHHHHTTHHHHCTTCCEEESGGGT
T ss_pred             CcccccccccccccccccccchhhHHHhHHHHhcchhhhccccceeeecccc
Confidence            211      00        1 1112222222 11136789999999999864

>d1k1da1 b.92.1.3 (A:1-52,A:385-460) D-hydantoinase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase)
domain: D-hydantoinase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.24  E-value=3.1e-07  Score=72.84  Aligned_cols=38  Identities=11%  Similarity=0.086  Sum_probs=36.3

Q ss_pred             CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEE
Q 019093          307 TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL  345 (346)
Q Consensus       307 dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~  345 (346)
                      |||++++|  .+|+|++++++|+++|||| +|++++|+|.+
T Consensus        58 ~~~~~~~dp~~~~~i~~~~~~s~~~~tpf-~G~~~~g~v~~   97 (128)
T d1k1da1          58 DADLVIFDPNIERVISAETHHMAVDYNAF-EGMKVTGEPVS   97 (128)
T ss_dssp             BCCEEEEEEEEEEECCTTTCCSSSSCCTT-TTCEEEEEEEE
T ss_pred             ccceEEeeccccEEEeccccccccceeee-cCcEEEEEEEE
Confidence            89999999  9999999999999999999 79999999976

>d1gkpa1 b.92.1.3 (A:2-54,A:390-459) D-hydantoinase {Thermus sp. [TaxId: 275]}

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase)
domain: D-hydantoinase
species: Thermus sp. [TaxId: 275]

Probab=98.20  E-value=3.2e-07  Score=72.23  Aligned_cols=38  Identities=11%  Similarity=0.136  Sum_probs=35.8

Q ss_pred             ccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093          308 SKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI  346 (346)
Q Consensus       308 Adlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~  346 (346)
                      ||+|+||  .+|++++++++|+++|||| ||++++|+|.++
T Consensus        54 ~d~~~~d~~~~~tis~~~~~s~~~~tpf-eG~~~~G~v~~t   93 (123)
T d1gkpa1          54 ADLVVYDPQYRGTISVKTQHVNNDYNGF-EGFEIDGRPSVV   93 (123)
T ss_dssp             CCEEEEETTCCEECCGGGCCSSSSCCTT-TTCEESCEEEEE
T ss_pred             cceEEEecccccccchhhhhcccccccc-cccEEeeEEEEE
Confidence            7999999  9999999999999999999 799999999863

>d1nfga1 b.92.1.3 (A:1-51,A:382-457) D-hydantoinase {Burkholderia pickettii [TaxId: 329]}

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase)
domain: D-hydantoinase
species: Burkholderia pickettii [TaxId: 329]

Probab=98.20  E-value=4.4e-07  Score=71.84  Aligned_cols=38  Identities=13%  Similarity=0.101  Sum_probs=36.4

Q ss_pred             CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEE
Q 019093          307 TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL  345 (346)
Q Consensus       307 dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~  345 (346)
                      +||++++|  .+|+|++++++|+++|||| +|++++|+|.+
T Consensus        57 ~~~~~i~dP~~~~tIt~~~~~s~~~~tpy-eG~~~~G~~~~   96 (127)
T d1nfga1          57 DADIVLWDPEAEMVIEQTAMHNAMDYSSY-EGHKVKGVPKT   96 (127)
T ss_dssp             BCCEEEEEEEEEEECCGGGSCSSCSCCTT-TTCEEEEEEEE
T ss_pred             cccceeeccccceEEehHHhccccCcCCC-cCCEEeeEEEE
Confidence            89999999  8999999999999999999 79999999986

>d1ynya1 b.92.1.3 (A:2-52,A:385-460) D-hydantoinase {Bacillus sp. AR9 [TaxId: 301298]}

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase)
domain: D-hydantoinase
species: Bacillus sp. AR9 [TaxId: 301298]

Probab=98.12  E-value=8.8e-07  Score=70.06  Aligned_cols=38  Identities=11%  Similarity=0.025  Sum_probs=36.3

Q ss_pred             CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEE
Q 019093          307 TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL  345 (346)
Q Consensus       307 dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~  345 (346)
                      +|||+++|  .+|+|++++++|+++|||| +|++++|+|.+
T Consensus        57 ~~~~~i~dp~~~~tI~~~~~~s~~~~tpf-eG~~~~G~v~~   96 (127)
T d1ynya1          57 DADIVIFDPHVKRTLSVETHHMNVDYNPF-EGMEVYGEVVS   96 (127)
T ss_dssp             BCCEEEEEEEEEEEECTTTCCSSSSCCTT-TTEEEEEEEEE
T ss_pred             cchhhhhccccceEEeehhhhhccCcCCc-CCCEEeeEEEE
Confidence            89999998  8999999999999999999 79999999976

>d2puza2 c.1.9.17 (A:80-380) Imidazolonepropionase {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Imidazolonepropionase-like
domain: Imidazolonepropionase
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.08  E-value=0.00015  Score=62.30  Aligned_cols=140  Identities=16%  Similarity=0.148  Sum_probs=79.7

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccCCCeeEEEc
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATV  196 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~akg~~vt~Et  196 (346)
                      +.+..+++.+...|.++..|+...+...           ...  ...+.....+...|..+.+..+++++.+   ..+-.
T Consensus       158 ~~~~~~~~~a~~~g~~~~~h~~~~~~~~-----------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~  221 (301)
T d2puza2         158 KEIDRVFAAAQQRGLPVKLHAEQLSNLG-----------GAE--LAASYNALSADHLEYLDETGAKALAKAG---TVAVL  221 (301)
T ss_dssp             HHHHHHHHHHHHTTCCBEEEESSSSCCS-----------HHH--HHHHTTCSEEEECTTCCHHHHHHHHHHT---CEEEE
T ss_pred             HHHHHHHHHHHHCCCceeeecccccchh-----------HHH--HHhhhccceeeeeecchHHHHHHHHhcC---Ceeee
Confidence            6788899999999999999988655311           111  2333334444455555777777777654   33334


Q ss_pred             cchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHH
Q 019093          197 TPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLY  276 (346)
Q Consensus       197 ~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l  276 (346)
                      ||..-    ... ..+   .   .||+         ++.++.|.--. +|||+.|...          ....+...+-++
T Consensus       222 ~~~~~----~~~-~~~---~---~~~~---------~~~~~~Gv~v~-lGTD~~~~~~----------~~~~l~~~~~~~  270 (301)
T d2puza2         222 LPGAF----YAL-REK---Q---LPPV---------QALRDAGAEIA-LATDCNPGTS----------PLTSLLLTMNMG  270 (301)
T ss_dssp             CHHHH----HHH-TCC---C---CCCH---------HHHHHHTCCEE-ECCCCCSSSC----------CBCCHHHHHHHH
T ss_pred             ccchh----hhh-ccc---c---cchH---------HHHHHCCCeEE-EEeCCCCCCC----------ccchHHHHHHHH
Confidence            44211    111 111   1   1332         33445576666 8999865321          111221111111


Q ss_pred             HHHHHhcCCHHHHHHHHchhhhhhcCCCC
Q 019093          277 AKVFEEMGALDKLEAFTSFNGPDFYGLPR  305 (346)
Q Consensus       277 ~~~~~~~~~l~~lv~~~s~nPAki~gl~~  305 (346)
                        +...+.+..++++..+.||||.+|+..
T Consensus       271 --~~~~gl~~~eal~~aT~~~A~~LGl~~  297 (301)
T d2puza2         271 --ATLFRMTVEECLTATTRNAAKALGLLA  297 (301)
T ss_dssp             --HHHHCCCHHHHHHHTTHHHHHHTTCTT
T ss_pred             --HHHcCCCHHHHHHHHHHHHHHHhCCCc
Confidence              122356899999999999999999953

>d1yrra2 c.1.9.10 (A:54-350) N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain
domain: N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain
species: Escherichia coli [TaxId: 562]

Probab=98.06  E-value=6e-07  Score=77.33  Aligned_cols=30  Identities=17%  Similarity=0.123  Sum_probs=23.3

Q ss_pred             HHHHHHHh-cCCHHHHHHHHchhhhhhcCCC
Q 019093          275 LYAKVFEE-MGALDKLEAFTSFNGPDFYGLP  304 (346)
Q Consensus       275 ~l~~~~~~-~~~l~~lv~~~s~nPAki~gl~  304 (346)
                      .++..... ..++++++++.+.||||++||.
T Consensus       263 ~~~~~v~~~gls~~~al~~aT~n~A~~LGld  293 (297)
T d1yrra2         263 GVRNLVEHCGIALDEVLRMATLYPARAIGVE  293 (297)
T ss_dssp             HHHHHHHHHCCCHHHHHHHHTHHHHHHTTCT
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHHHHHHhCCC
Confidence            34433333 5599999999999999999994

>d2uz9a2 c.1.9.9 (A:76-388) Guanine deaminase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: SAH/MTA deaminase-like
domain: Guanine deaminase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=0.002  Score=56.96  Aligned_cols=145  Identities=12%  Similarity=0.062  Sum_probs=85.0

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHH-------HH-HHHHhCCCCcEEEEccC--CHHHHHHHHc
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTI-------LQ-PLIQRLPQLKVVMEHIT--TMDAVKFVES  186 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~-------l~-~~la~~~g~~lhi~HvS--t~~~l~~i~~  186 (346)
                      +.+.++.+.+++.|.++.+|.....       .|..++...       +. ..-....+.++.+.|..  +.+.++++++
T Consensus       146 e~l~~~~~~a~~~g~~~~~H~~e~~-------~e~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~H~~~l~~~e~~~l~~  218 (313)
T d2uz9a2         146 TLMGELGNIAKTRDLHIQSHISENR-------DEVEAVKNLYPSYKNYTSVYDKNNLLTNKTVMAHGCYLSAEELNVFHE  218 (313)
T ss_dssp             HHHHHHHHHHHHHTCEEEEEESCSH-------HHHHHHHHHSTTSSSHHHHHHHTTCCSTTEEEEECTTCCHHHHHHHHH
T ss_pred             HHHHHHHHHhhccccceeeehhcch-------hHHHHHHHhhcccCChHHHHHHcCCcCCcceEEeeeecchhHHHHHhh
Confidence            7888999999999999999987431       122222111       10 01122346788888887  6888998887


Q ss_pred             cCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCc
Q 019093          187 CKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGI  266 (346)
Q Consensus       187 akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~  266 (346)
                      .   .+..-.||..-...       +.+     .||+         -+.++.|.-=. +|||-++-.           +.
T Consensus       219 ~---g~~~~~~P~~~~~~-------~~~-----~~~v---------~~l~~~Gv~va-lGTD~~~~~-----------~~  262 (313)
T d2uz9a2         219 R---GASIAHCPNSNLSL-------SSG-----FLNV---------LEVLKHEVKIG-LGTDVAGGY-----------SY  262 (313)
T ss_dssp             H---TCEEEECHHHHHHT-------TCC-----CCCH---------HHHHHTTCEEE-ECCCTTTSC-----------CC
T ss_pred             h---cccccccchhhhhc-------ccc-----ccch---------hhhhccCceEE-EeCCCCCCC-----------CC
Confidence            5   35667788533211       111     2442         22334466555 899964321           11


Q ss_pred             cch-hHHHHHHHH-HHH--h----cCCHHHHHHHHchhhhhhcCCC
Q 019093          267 YNA-PVALSLYAK-VFE--E----MGALDKLEAFTSFNGPDFYGLP  304 (346)
Q Consensus       267 ~g~-e~~lp~l~~-~~~--~----~~~l~~lv~~~s~nPAki~gl~  304 (346)
                      .-+ |....+++. ...  +    ..+.++++++.+.|+||.+|++
T Consensus       263 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~e~l~~AT~ngA~aLg~~  308 (313)
T d2uz9a2         263 SMLDAIRRAVMVSNILLINKVNEKSLTLKEVFRLATLGGSQALGLD  308 (313)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSSSSCCCHHHHHHHHTHHHHHHTTCT
T ss_pred             CHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCC
Confidence            112 222333222 111  1    1368999999999999999995

>d1zzma1 c.1.9.12 (A:1-259) Putative deoxyribonuclease YjjV {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: TatD Mg-dependent DNase-like
domain: Putative deoxyribonuclease YjjV
species: Escherichia coli [TaxId: 562]

Probab=97.84  E-value=0.00022  Score=62.48  Aligned_cols=142  Identities=16%  Similarity=0.134  Sum_probs=75.6

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEcc--CCHHHHHHHHccCCCeeEE
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHI--TTMDAVKFVESCKEGFVAA  194 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~Hv--St~~~l~~i~~akg~~vt~  194 (346)
                      ..+.+.++.++++|+|+++||-+..         .    .++. .+..+...+..+.|-  ++.+.++.+.+. |  .+.
T Consensus       114 ~~f~~ql~lA~~~~~Pv~IH~r~a~---------~----~~~~-~l~~~~~~~~~i~H~f~g~~~~~~~~l~~-g--~~~  176 (259)
T d1zzma1         114 WLLDEQLKLAKRYDLPVILHSRRTH---------D----KLAM-HLKRHDLPRTGVVHGFSGSLQQAERFVQL-G--YKI  176 (259)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEESCH---------H----HHHH-HHHHHCCTTCEEETTCCSCHHHHHHHHHT-T--CEE
T ss_pred             HHHHHHHHHHHHhccchhhhhHHHH---------H----HHHH-hhhccccccceeeecccCCHHHHHHHHHc-C--CCc
Confidence            4566788999999999999997641         1    1221 122222223346674  455555544431 2  122


Q ss_pred             EccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHH
Q 019093          195 TVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALS  274 (346)
Q Consensus       195 Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp  274 (346)
                      .+++       .-..             .+.++-| .+.+.+-.+.|  ++-|| +|+..-.+..     |-.+-...++
T Consensus       177 si~~-------~~~~-------------~~~~~~~-~~v~~iPldri--L~ETD-~P~~~~~~~~-----~~~~~P~~~~  227 (259)
T d1zzma1         177 GVGG-------TITY-------------PRASKTR-DVIAKLPLASL--LLETD-APDMPLNGFQ-----GQPNRPEQAA  227 (259)
T ss_dssp             EECG-------GGGC-------------TTTCSHH-HHHHHSCGGGE--EECCC-BTSSCCTTCT-----TSCCCGGGHH
T ss_pred             cccc-------cccc-------------cchHHHH-HHHHhhccceE--EEecC-CCCcCCCcCC-----CCCCchHHHH
Confidence            2222       1000             0112223 34555554544  36899 5764322211     2222223455


Q ss_pred             HHHHHHHh--cCCHHHHHHHHchhhhhhcCCC
Q 019093          275 LYAKVFEE--MGALDKLEAFTSFNGPDFYGLP  304 (346)
Q Consensus       275 ~l~~~~~~--~~~l~~lv~~~s~nPAki~gl~  304 (346)
                      .+...+.+  ..+.+++.+.+..|-.|+||||
T Consensus       228 ~~~~~iA~i~~~~~~ev~~~~~~N~~rlf~lp  259 (259)
T d1zzma1         228 RVFAVLCELRREPADEIAQALLNNTYTLFNVP  259 (259)
T ss_dssp             HHHHHHHHHCSSCHHHHHHHHHHHHHHHHCCC
T ss_pred             HHHHHHHHHhCCCHHHHHHHHHHHHHHHhCCC
Confidence            55443323  3489999999999999999996

>d2bb0a2 c.1.9.17 (A:74-373) Imidazolonepropionase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Imidazolonepropionase-like
domain: Imidazolonepropionase
species: Bacillus subtilis [TaxId: 1423]

Probab=97.83  E-value=0.0013  Score=56.35  Aligned_cols=137  Identities=15%  Similarity=0.204  Sum_probs=73.6

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccC--CHHHHHHHHccCCCeeEE
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHIT--TMDAVKFVESCKEGFVAA  194 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvS--t~~~l~~i~~akg~~vt~  194 (346)
                      ..+.++.+.+++.+..+..|+...+...         ...    ...+....  .+.|..  +.+.++++.+..   ...
T Consensus       157 ~~~~~~~~~~~~~~~~~~~h~~~~~~~~---------~~~----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~  218 (300)
T d2bb0a2         157 SQSRRYLQKAAEAGFGLKIHADEIDPLG---------GAE----LAGKLKAV--SADHLVGTSDEGIKKLAEAG---TIA  218 (300)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEECSSSCCS---------HHH----HHHHTTCS--EEEECTTCCHHHHHHHHHHT---CEE
T ss_pred             HHHHHHHHHHHhhhhcccccccchhhhH---------HHH----HHHHhCCc--eEEEeeeccHHHHHHHHhcC---cce
Confidence            6778888999999999999998654210         011    12222222  233333  556667666643   334


Q ss_pred             EccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHH
Q 019093          195 TVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALS  274 (346)
Q Consensus       195 Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp  274 (346)
                      -.||-.      ++.- ..+..    +|      ..   +.+..|. .+.+|||+.+.+...          ..+..   
T Consensus       219 ~~~~~s------~~~l-~~~~~----~~------~~---~l~~~Gv-~v~lgTD~~~~~~~~----------~~l~~---  264 (300)
T d2bb0a2         219 VLLPGT------TFYL-GKSTY----AR------AR---AMIDEGV-CVSLATDFNPGSSPT----------ENIQL---  264 (300)
T ss_dssp             EECHHH------HHHT-TCCCC----CC------HH---HHHHTTC-CEEECCCBBTTTBCC----------CCHHH---
T ss_pred             eecchh------hhhh-hcccc----cc------HH---HHHHCCC-EEEEEeCCCCCCCch----------hhHHH---
Confidence            455521      1110 01111    22      12   2344465 444999986532111          11211   


Q ss_pred             HHHHHH-HhcCCHHHHHHHHchhhhhhcCCCC
Q 019093          275 LYAKVF-EEMGALDKLEAFTSFNGPDFYGLPR  305 (346)
Q Consensus       275 ~l~~~~-~~~~~l~~lv~~~s~nPAki~gl~~  305 (346)
                      .+.... ..+.+..++++..+.||||.+|+..
T Consensus       265 ~~~~a~~~~gl~~~eal~~aT~~~A~~lG~~~  296 (300)
T d2bb0a2         265 IMSIAALHLKMTAEEIWHAVTVNAAYAIGKGE  296 (300)
T ss_dssp             HHHHHHHHSCCCHHHHHHHTTHHHHHHTTCTT
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHHHHhCcch
Confidence            122222 2245899999999999999999953

>d2q09a2 c.1.9.17 (A:66-366) Probable 4-imidazolone-5-propanoate amidohydrolase GOS_1928421 {Environmental samples}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Imidazolonepropionase-like
domain: Probable 4-imidazolone-5-propanoate amidohydrolase GOS 1928421
species: Environmental samples

Probab=97.82  E-value=0.00099  Score=56.19  Aligned_cols=137  Identities=12%  Similarity=0.055  Sum_probs=73.2

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccC--CHHHHHHHHccCCCeeEE
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHIT--TMDAVKFVESCKEGFVAA  194 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvS--t~~~l~~i~~akg~~vt~  194 (346)
                      ....+........+..+..|+.......         ..+..    .. .+. ..+.|..  +.+.++++++.   .+..
T Consensus       158 ~~~~~~~~~~~~~~~~~~~h~~~~~~~~---------~~~~~----~~-~~~-~~~~~~~~~~~~~~~~~~~~---~~~~  219 (301)
T d2q09a2         158 AQTEQVYLAADQYGLAVKGHMDQLSNLG---------GSTLA----AN-FGA-LSVDHLEYLDPEGIQALAHR---GVVA  219 (301)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEESSSCCCS---------HHHHH----HH-TTC-SEEEECTTCCHHHHHHHHHH---TCEE
T ss_pred             hhHHHHHHHHHHhcccceecccccchhH---------HHHHH----Hh-cCC-ceEeeeecCcHHHHHHHHHc---CCCc
Confidence            4555666777778888888987543200         11111    11 122 2344444  67778877764   3455


Q ss_pred             EccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHH
Q 019093          195 TVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALS  274 (346)
Q Consensus       195 Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp  274 (346)
                      -.||..-+..     ..  +    ..||+         .+..+.|.--. +|||+.|.+.         ++ ..+...+-
T Consensus       220 ~~~~~s~~~l-----~~--~----~~~~~---------~~l~~aGv~v~-lGTD~~~~~~---------~~-~~l~~~~~  268 (301)
T d2q09a2         220 TLLPTAFYFL-----KE--T----KLPPV---------VALRKAGVPMA-VSSDINPGTA---------PI-VSLRMAMN  268 (301)
T ss_dssp             EECHHHHHHT-----TC--C----CCCCH---------HHHHHTTCCEE-ECCCCBTTTB---------CC-CCHHHHHH
T ss_pred             ccCccHHhhh-----cc--c----ccCcH---------HHHHHCCCeEE-EEeCCCCCCC---------Cc-chHHHHHH
Confidence            6677422111     10  1    12332         23345576555 8999866421         11 11211111


Q ss_pred             HHHHHHHhcCCHHHHHHHHchhhhhhcCCC
Q 019093          275 LYAKVFEEMGALDKLEAFTSFNGPDFYGLP  304 (346)
Q Consensus       275 ~l~~~~~~~~~l~~lv~~~s~nPAki~gl~  304 (346)
                      ++  +.....+..++++..+.||||.+|+.
T Consensus       269 ~~--~~~~glt~~eal~~aT~~~A~~lG~~  296 (301)
T d2q09a2         269 MA--CTLFGLTPVEAMAGVTRHAARALGEQ  296 (301)
T ss_dssp             HH--HHHHCCCHHHHHHHTTHHHHHHTTCT
T ss_pred             HH--HHHcCCCHHHHHHHHHHHHHHHhCcc
Confidence            11  11224589999999999999999995

>d2gwga1 c.1.9.15 (A:1-342) 4-oxalomesaconate hydratase LigJ {Rhodopseudomonas palustris [TaxId: 1076]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: PP1699/LP2961-like
domain: 4-oxalomesaconate hydratase LigJ
species: Rhodopseudomonas palustris [TaxId: 1076]

Probab=97.79  E-value=0.00062  Score=60.91  Aligned_cols=195  Identities=13%  Similarity=0.129  Sum_probs=97.2

Q ss_pred             HHHHHHHHHcCCeeEEEEeecCCccC-CCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCC----h--hhhHHHHH
Q 019093           82 PDEIKLARKTGVVFAVKLYPAGATTN-SQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVD----I--FDREKVFI  154 (346)
Q Consensus        82 ~~el~~l~~~G~v~~~Kif~~~~~~~-~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~----~--~~~E~~av  154 (346)
                      ..|+...++.+...|+|+++...... .+..++|  ..++++++.++++|+++.+|+........    .  ...+..++
T Consensus       125 ~~e~~~~~~~~~~~gi~~~~~~~~~~~~~~~l~d--~~~~~~~~~~~~~glpv~~H~~~~~~~~~~~~~~~~~~~~~~~~  202 (342)
T d2gwga1         125 IPELEKCVKEYGFVAINLNPDPSGGHWTSPPLTD--RIWYPIYEKMVELEIPAMIHVSTSCNTCFHTTGAHYLNADTTAF  202 (342)
T ss_dssp             HHHHHHHHHTSCCCEEEECSCTTSSCCCSCCTTS--GGGHHHHHHHHHHTCCEEECCCC---------TTHHHHHHHHHH
T ss_pred             HHHHhhhHhhccceEEEEeccccccccCCCCCCC--HHHHHHHHHhhcCCCeEEEccCCCcCcccccccccccchhhhhh
Confidence            34666665544478999986432111 1223444  68899999999999999999986543211    1  12222333


Q ss_pred             HHH-HHHHHHhCCCCcEEEEccCCH-----HHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhh
Q 019093          155 DTI-LQPLIQRLPQLKVVMEHITTM-----DAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIH  228 (346)
Q Consensus       155 ~~~-l~~~la~~~g~~lhi~HvSt~-----~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d  228 (346)
                      ..+ +...+.+++++++.+.|....     +............           ...+.+.     ......++.-....
T Consensus       203 ~~l~~~~~~~~~P~lk~v~~H~g~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~-----~~~~~~~~~~~~~~  266 (342)
T d2gwga1         203 MQCVAGDLFKDFPELKFVIPHGGGAVPYHWGRFRGLAQEMKKP-----------LLEDHVL-----NNIFFDTCVYHQPG  266 (342)
T ss_dssp             HHHHHSCHHHHCTTCCEEESGGGTTTGGGHHHHHHHHHHTTCC-----------CHHHHTT-----TTEEEECCCCSHHH
T ss_pred             HHHHHhhhhhhcccchhhhhhcccccchHHHHHHHHHhhcccc-----------cchhhhh-----cceeeccccCCHHH
Confidence            222 211357899999999997531     1111111111110           0011111     11122222223445


Q ss_pred             HHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHchhhhhhc-CC
Q 019093          229 RQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFY-GL  303 (346)
Q Consensus       229 ~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~~~~l~~lv~~~s~nPAki~-gl  303 (346)
                      -+.|++.+--.  -++.|||. |+........   .|..-. .....+.  .....+-++.-+++..|++|+| .|
T Consensus       267 l~~l~~~~G~d--RimfGSD~-P~~~~~~~~~---~~~~~~-~~~~~~~--~~~~Ls~~~~~~I~~~NA~rly~rl  333 (342)
T d2gwga1         267 IDLLNTVIPVD--NVLFASEM-IGAVRGIDPR---TGFYYD-DTKRYIE--ASTILTPEEKQQIYEGNARRVYPRL  333 (342)
T ss_dssp             HHHHHHHSCGG--GEECCCCC-SSSCCCEETT---TTEETT-CTHHHHH--HCSSSCHHHHHHHHTHHHHHHCHHH
T ss_pred             HHHHHHHhCCC--eEEEeCCC-CCCccCCCcc---cccchh-HHHHHHH--HcCCCCHHHHHHHHhHHHHHHHHhh
Confidence            55677766222  33469995 8754332211   111100 0111111  0112466788899999999999 44

>d4ubpc2 c.1.9.2 (C:132-434,C:484-570) alpha-subunit of urease, catalytic domain {Bacillus pasteurii [TaxId: 1474]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: alpha-subunit of urease, catalytic domain
domain: alpha-subunit of urease, catalytic domain
species: Bacillus pasteurii [TaxId: 1474]

Probab=97.79  E-value=3.5e-05  Score=69.44  Aligned_cols=139  Identities=16%  Similarity=0.128  Sum_probs=87.3

Q ss_pred             CccccceecCCCccccccccccCCceeEEEeCCCCCCC------CCcHH--HHHHHHHHHHhhCCCCccEEEEEEEEeCC
Q 019093            7 QPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPP------ITTTA--AAVAYRESILKALPASSNFTPLMTLYLTD   78 (346)
Q Consensus         7 G~ID~HvH~r~g~~~ke~~~s~sGGvTtvv~mPnt~p~------~~~~~--~~~~~~~~~~~~~~~~vd~~~~~~~~~~~   78 (346)
                      |.||.||||--.+...   ...+.|+||++-.- |.|.      ..++.  .+....+.. +.-.  ++|+|.+-   ..
T Consensus         1 GgiDtHvHfi~Pqq~~---~al~sGiTT~~GgG-tGpa~gt~att~tpG~~~i~~ml~a~-d~~P--~N~g~~gk---Gn   70 (390)
T d4ubpc2           1 GGIDTHVHFINPDQVD---VALANGITTLFGGG-TGPAEGSKATTVTPGPWNIEKMLKST-EGLP--INVGILGK---GH   70 (390)
T ss_dssp             CEEEEEEECCCTTHHH---HHHHTTEEEEEEEC-CSSCHHHHHSSCCCHHHHHHHHHHHH-TTCS--SEEEEEEE---CC
T ss_pred             CCccccccccCHHHHH---HHHhcCCeeeecCc-cCCCCCCCCcccCCCHHHHHHHHHhh-hhCC--cceeeeec---cc
Confidence            7899999986422221   23457899988862 2332      11222  223332222 2222  88988765   22


Q ss_pred             CCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHH
Q 019093           79 TTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTIL  158 (346)
Q Consensus        79 ~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l  158 (346)
                      ....+-|.+.+++| .+|+|++-.       ++..-  ..+..+|..+.+.+.-|.+|...-.-        .-.+..  
T Consensus        71 ~s~~~~l~eqi~aG-a~GlKiHED-------wGatp--a~id~~L~vad~~dvqv~iHtDtlNE--------~gfve~--  130 (390)
T d4ubpc2          71 GSSIAPIMEQIDAG-AAGLKIHED-------WGATP--ASIDRSLTVADEADVQVAIHSDTLNE--------AGFLED--  130 (390)
T ss_dssp             CSSHHHHHHHHHHT-CCEEEEEGG-------GCCCH--HHHHHHHHHHHHHTCEEEEECCTTCS--------SCCHHH--
T ss_pred             cCChHHHHHHHHhh-hheeecccc-------cccCH--HHHHHHHHHhhccCceEEEecCCccc--------ceehhh--
Confidence            34567788889999 689999853       33222  67889999999999999999874211        001222  


Q ss_pred             HHHHHhCCCCcEEEEccCC
Q 019093          159 QPLIQRLPQLKVVMEHITT  177 (346)
Q Consensus       159 ~~~la~~~g~~lhi~HvSt  177 (346)
                        .++..-|..+|..|+--
T Consensus       131 --T~~a~~gRtiH~~HtEG  147 (390)
T d4ubpc2         131 --TLRAINGRVIHSFHVEG  147 (390)
T ss_dssp             --HHHHHTTCCEEETTTTS
T ss_pred             --HHHHhCCceeecccCCC
Confidence              45666688899999854

>d2f6ka1 c.1.9.15 (A:2-307) Putative amidohydrolase LP2961 {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: PP1699/LP2961-like
domain: Putative amidohydrolase LP2961
species: Lactobacillus plantarum [TaxId: 1590]

Probab=97.75  E-value=0.00024  Score=63.47  Aligned_cols=101  Identities=14%  Similarity=0.182  Sum_probs=64.2

Q ss_pred             cEEEEEEEEeCCCC---CHHHHHHHHH-cCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCC
Q 019093           67 NFTPLMTLYLTDTT---SPDEIKLARK-TGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDP  142 (346)
Q Consensus        67 d~~~~~~~~~~~~~---~~~el~~l~~-~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~  142 (346)
                      +|..++.+  ....   ..+|+.+.++ .| +.|+|+++..    .+..++|  ..++.+++.++++|++|++|......
T Consensus        89 Rf~~~a~v--p~~~~~~a~~el~r~~~~~G-~~Gi~~~~~~----~~~~~~d--p~~~pi~~~~~e~~lpv~~H~~~~~~  159 (306)
T d2f6ka1          89 QLGYLASL--PIPYELDAVKTVQQALDQDG-ALGVTVPTNS----RGLYFGS--PVLERVYQELDARQAIVALHPNEPAI  159 (306)
T ss_dssp             TEEEEECC--CTTCHHHHHHHHHHHHHTSC-CSEEEEESEE----TTEETTC--GGGHHHHHHHHTTTCEEEEECCCCSC
T ss_pred             eEEEEeec--ccchhhHHHHHHHHHHhccc-ceEEEecCcc----ccccCCC--ccchHHHHHHHHcCCceEeccCCCCC
Confidence            47665554  3221   2346777665 48 7899997632    2334545  67899999999999999999776543


Q ss_pred             CCC-----h-------hhhHHHHHHHHH-HHHHHhCCCCcEEEEccC
Q 019093          143 IVD-----I-------FDREKVFIDTIL-QPLIQRLPQLKVVMEHIT  176 (346)
Q Consensus       143 ~~~-----~-------~~~E~~av~~~l-~~~la~~~g~~lhi~HvS  176 (346)
                      ...     .       ...++.++.+++ ...+.+++++++.+.|..
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~rfP~l~~v~~H~G  206 (306)
T d2f6ka1         160 LPKNVDIDLPVPLLGFFMDTTMTFINMLKYHFFEKYPNIKVIIPHAG  206 (306)
T ss_dssp             CCTTSSTTCCHHHHHHHHHHHHHHHHHHHTTHHHHCTTCEEEESGGG
T ss_pred             CcccccccCccchhhhhHHHHHHHHHHHHhhhhhhccCceEEEeecc
Confidence            211     0       112333444432 113678999999999986

>d1ra0a2 c.1.9.5 (A:56-375) Cytosine deaminase catalytic domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Cytosine deaminase catalytic domain
domain: Cytosine deaminase catalytic domain
species: Escherichia coli [TaxId: 562]

Probab=97.72  E-value=0.00023  Score=61.90  Aligned_cols=162  Identities=13%  Similarity=0.042  Sum_probs=78.1

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccC------CHHHHHHHHccCCC
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHIT------TMDAVKFVESCKEG  190 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvS------t~~~l~~i~~akg~  190 (346)
                      +.+..+++.+++.|.++.+|+....-..   ..........   ........+..+.|..      .....+.++..+..
T Consensus       140 ~~~~~~~~~A~~~g~~~~~h~~~~~~~~---~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (320)
T d1ra0a2         140 ESLHKTFALAQKYDRLIDVHCDEIDDEQ---SRFVETVAAL---AHHEGMGARVTASHTTAMHSYNGAYTSRLFRLLKMS  213 (320)
T ss_dssp             HHHHHHHHHHHHHTCEEEEEECCSSCTT---CCHHHHHHHH---HHHHTCGGGEEEEECGGGGGSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCeeeeecccchhH---HHhhhhHHHH---HHHhhcccccccccceeccccchhhhHHHHHHhhhc
Confidence            5677888889999999999986543211   1111111111   1222233444444442      12222222222112


Q ss_pred             eeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchh
Q 019093          191 FVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAP  270 (346)
Q Consensus       191 ~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e  270 (346)
                      .++.-.||-.-..-         +......|..+.......   .+..|.--. ++||+....       +...|....-
T Consensus       214 g~~~~~~p~~~~~~---------~~~~~~~~~~~~~~~~~~---~~~~G~~v~-~gtd~~~~~-------~~~~~~~~~~  273 (320)
T d1ra0a2         214 GINFVANPLVNIHL---------QGRFDTYPKRRGITRVKE---MLESGINVC-FGHDGVFDP-------WYPLGTANML  273 (320)
T ss_dssp             TCEEEECHHHHHHH---------TTTTCCSSCCCCCCCHHH---HHHTTCCEE-ECCBCSSBT-------TBSCCCCCHH
T ss_pred             CcEEEeccchhhhh---------cccccccccccccCchhh---HhhcCceEe-ecCCcCCCC-------CCCCCChhHH
Confidence            35556666321110         112223333333323233   344476666 899975532       1112333332


Q ss_pred             HHHHHHHHHHHhc--CCHHHHHHHHchhhhhhcCCC
Q 019093          271 VALSLYAKVFEEM--GALDKLEAFTSFNGPDFYGLP  304 (346)
Q Consensus       271 ~~lp~l~~~~~~~--~~l~~lv~~~s~nPAki~gl~  304 (346)
                      ..+...+......  .++.+++++.+.||||.+||.
T Consensus       274 ~~~~~~~~~~~~~~~~s~~eal~~aT~ngA~aLgl~  309 (320)
T d1ra0a2         274 QVLHMGLHVCQLMGYGQINDGLNLITHHSARTLNLQ  309 (320)
T ss_dssp             HHHHHHHHHTTCCSHHHHHGGGGGGTHHHHHHTTCS
T ss_pred             HHHHHHHHHhccCCCCCHHHHHHHHHHHHHHHhCCC
Confidence            2233222222222  267899999999999999994

>d1yixa1 c.1.9.12 (A:1-265) Putative deoxyribonuclease YcfH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: TatD Mg-dependent DNase-like
domain: Putative deoxyribonuclease YcfH
species: Escherichia coli [TaxId: 562]

Probab=97.71  E-value=0.00094  Score=58.50  Aligned_cols=233  Identities=15%  Similarity=0.094  Sum_probs=113.9

Q ss_pred             ccccceecCC-Ccc-cccccc----c-cCCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCC-
Q 019093            8 PDDWHLHLRD-GDL-LKAVVP----H-SVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDT-   79 (346)
Q Consensus         8 ~ID~HvH~r~-g~~-~ke~~~----s-~sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~-   79 (346)
                      +||.|+|+.. ..+ ..+++.    . ...|++.++...      ++++......+.+++.    -++.+..++  .|. 
T Consensus         3 lIDtH~Hld~~~~e~~~~d~~~vi~~a~~~gv~~ii~~~------~~~~~~~~~~~l~~~~----~~i~~~~Gi--HP~~   70 (265)
T d1yixa1           3 LVDSHCHLDGLDYESLHKDVDDVLAKAAARDVKFCLAVA------TTLPSYLHMRDLVGER----DNVVFSCGV--HPLN   70 (265)
T ss_dssp             EEEEEECGGGSCTTTTCSSHHHHHHHHHHTTEEEEEECC------SSHHHHHHHHHHHCSC----TTEEEEECC--CTTC
T ss_pred             EEEecccCCccccchhhcCHHHHHHHHHHcCCCEEEEee------CCHHHHHHHHHHHHhc----ccccccccc--cccc
Confidence            7999999964 222 122332    1 237898887643      2344444444433221    233332233  431 


Q ss_pred             ----CCHHHHHHHHHcCCeeEE-----EEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhH
Q 019093           80 ----TSPDEIKLARKTGVVFAV-----KLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDRE  150 (346)
Q Consensus        80 ----~~~~el~~l~~~G~v~~~-----Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E  150 (346)
                          ...+++.++.+...++++     -.|..    .+. .... +..+.+-++.++++++|+++|+-+..         
T Consensus        71 ~~~~~~~e~l~~~~~~~~vvaIGEiGLD~~~~----~~~-~~~q-~~~f~~ql~lA~~~~lPv~iH~r~a~---------  135 (265)
T d1yixa1          71 QNDPYDVEDLRRLAAEEGVVALGETGLDYYYT----PET-KVRQ-QESFIHHIQIGRELNKPVIVHTRDAR---------  135 (265)
T ss_dssp             CSSCCCHHHHHHHHTSTTEEEEEEEEEECTTC----SSC-HHHH-HHHHHHHHHHHHHHTCCEEEEEESCH---------
T ss_pred             cccccchHHHHHHhccCCceeeeccccccccc----ccc-hHHH-HHHHHHHHHHHHHhCCCcccchhhHH---------
Confidence                235567666653324332     22211    110 0001 13566778889999999999999752         


Q ss_pred             HHHHHHHHHHHHHhCCCCcEEEEcc-C-CHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChh-
Q 019093          151 KVFIDTILQPLIQRLPQLKVVMEHI-T-TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREI-  227 (346)
Q Consensus       151 ~~av~~~l~~~la~~~g~~lhi~Hv-S-t~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~-  227 (346)
                      . .+..++  ........+. |.|. | +.+.++.+.+. |                         .++-+++.+-... 
T Consensus       136 ~-~~~~il--~~~~~~~~~~-v~H~FsG~~~~a~~~l~~-g-------------------------~~~s~~g~~~~~~~  185 (265)
T d1yixa1         136 A-DTLAIL--REEKVTDCGG-VLHCFTEDRETAGKLLDL-G-------------------------FYISFSGIVTFRNA  185 (265)
T ss_dssp             H-HHHHHH--HHTTGGGTCE-EETTCCSCHHHHHHHHTT-T-------------------------CEEEECGGGGSTTC
T ss_pred             H-HHHHHH--HhhcccCcce-EEEeecCChHHHHHHHHc-C-------------------------CeecCccccccchh
Confidence            1 111222  1222234555 5565 2 44433333321 1                         1222222221111 


Q ss_pred             -hHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHh--cCCHHHHHHHHchhhhhhcCCC
Q 019093          228 -HRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEE--MGALDKLEAFTSFNGPDFYGLP  304 (346)
Q Consensus       228 -d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~--~~~l~~lv~~~s~nPAki~gl~  304 (346)
                       .-..+...+-.+.  +++-|| +|+..-.+.     .|-.+-...++.+...+.+  ..+.+++.+.+..|.-++|||+
T Consensus       186 ~~l~~~v~~iPldr--lLlETD-~P~~~p~~~-----~~~~n~P~~i~~~~~~iA~i~~~~~~ev~~~~~~Na~~lf~l~  257 (265)
T d1yixa1         186 EQLRDAARYVPLDR--LLVETD-SPYLAPVPH-----RGKENQPAMVRDVAEYMAVLKGVAVEELAQVTTDNFARLFHID  257 (265)
T ss_dssp             HHHHHHHHHSCGGG--EEECCC-BTSCCCTTC-----TTSCCCGGGHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHhcchhc--eEeecC-CcccCcccc-----CCCCCCcHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhCCC
Confidence             1123444443333  346899 487533221     1222223345555443322  3489999999999999999995


Q ss_pred             C
Q 019093          305 R  305 (346)
Q Consensus       305 ~  305 (346)
                      .
T Consensus       258 ~  258 (265)
T d1yixa1         258 A  258 (265)
T ss_dssp             G
T ss_pred             H
Confidence            3

>d2i9ua2 c.1.9.9 (A:67-376) Guanine deaminase {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: SAH/MTA deaminase-like
domain: Guanine deaminase
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=97.68  E-value=0.0025  Score=56.25  Aligned_cols=143  Identities=13%  Similarity=0.130  Sum_probs=79.3

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHH-------HHHHHHh--CCC-CcEEEEccC--CHHHHHHH
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTI-------LQPLIQR--LPQ-LKVVMEHIT--TMDAVKFV  184 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~-------l~~~la~--~~g-~~lhi~HvS--t~~~l~~i  184 (346)
                      +.+.++.+.+++.|.++.+|+....       .|.......       .+ .+.+  ..+ -++.++|..  +.+.++++
T Consensus       144 e~~~~~~~~a~~~~~~~~~H~~E~~-------~e~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~H~~~~~~~~i~~l  215 (310)
T d2i9ua2         144 ELMDGLGKLSYKYRLPVQSHLSENL-------DEIAVVKSLHKKSNFYGE-VYDKFGLFGNTPTLMAHCIHSSKEEINLI  215 (310)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEESCCH-------HHHHHHHHHCTTCSSHHH-HHHHTTCSSSSCEEEEECCSCCHHHHHHH
T ss_pred             HHHHHHHHHhhccccceeehhccch-------HHHHHHHHHhcccccHHH-HHHhcCCccCCceeeeeeeeechhHHHHH
Confidence            7888999999999999999976431       121111100       00 1111  122 246666764  78899999


Q ss_pred             HccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCC
Q 019093          185 ESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCA  264 (346)
Q Consensus       185 ~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~  264 (346)
                      +++   .++.-.||-      ++..- +.+     -||         +.+.+..|. .+-+|||..|...          
T Consensus       216 a~~---g~~vv~cP~------sn~~l-~~g-----~~p---------v~~l~~~Gv-~v~lGTD~~~~~~----------  260 (310)
T d2i9ua2         216 KRN---NVTIVHCPT------SNFNL-GSG-----MMP---------VRKYLNLGI-NVVLGSDISAGHT----------  260 (310)
T ss_dssp             HHT---TCEEEECHH------HHHHT-TCC-----CCC---------HHHHHHTTC-EEEECCCBTTBCC----------
T ss_pred             Hhc---CCEEEEeec------ccccc-cCC-----ccc---------ccchhccCc-eEEEecCCCCCCC----------
Confidence            975   356678893      22211 111     144         223334454 5449999755321          


Q ss_pred             Cccch-hHHHHHHHHHHHh--------cCCHHHHHHHHchhhhhhcCC
Q 019093          265 GIYNA-PVALSLYAKVFEE--------MGALDKLEAFTSFNGPDFYGL  303 (346)
Q Consensus       265 G~~g~-e~~lp~l~~~~~~--------~~~l~~lv~~~s~nPAki~gl  303 (346)
                       ..-+ |..+.+++..+..        ..+.+++.++.+.|.||.+|.
T Consensus       261 -~dm~~~m~~a~~~~~~~~~~~~~~~~~l~~~e~l~~aT~~gA~alGr  307 (310)
T d2i9ua2         261 -CSLFKVIAYAIQNSKIKWQESGKKDMFLSTSEAFYMATKKGGSFFGK  307 (310)
T ss_dssp             -SCHHHHHHHHHHHHHHHHHHTTSCSCCCCHHHHHHHHTHHHHTTTSS
T ss_pred             -CCHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHHhcC
Confidence             1112 2223332221111        135789999999999999983

>d1e9yb2 c.1.9.2 (B:132-431,B:481-569) alpha-subunit of urease, catalytic domain {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: alpha-subunit of urease, catalytic domain
domain: alpha-subunit of urease, catalytic domain
species: Helicobacter pylori [TaxId: 210]

Probab=97.48  E-value=0.00019  Score=64.61  Aligned_cols=157  Identities=13%  Similarity=0.112  Sum_probs=95.6

Q ss_pred             ccccceecCCCccccccccccCCceeEEEeCCCCCCC------CCcH--HHHHHHHHHHHhhCCCCccEEEEEEEEeCCC
Q 019093            8 PDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPP------ITTT--AAAVAYRESILKALPASSNFTPLMTLYLTDT   79 (346)
Q Consensus         8 ~ID~HvH~r~g~~~ke~~~s~sGGvTtvv~mPnt~p~------~~~~--~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~   79 (346)
                      +||.||||--.+...   ...+.|+||++-.- |.|.      ..++  --+....+.. +.-.  ++|+|.+-   ...
T Consensus         1 GiDtHvHfi~Pqq~~---~al~sGiTT~iGgG-tGPa~Gt~att~tpg~~~i~~ml~a~-d~~P--~N~g~~gk---Gn~   70 (389)
T d1e9yb2           1 GIDTHIHFISPQQIP---TAFASGVTTMIGGG-TGPADGTNATTITPGRRNLKWMLRAA-EEYS--MNLGFLAK---GNA   70 (389)
T ss_dssp             EEEEEEETTCTTHHH---HHHHTTEEEEEEEC-CSSCHHHHHCCCCCHHHHHHHHHHHH-TTSS--SEEEEEEE---CCC
T ss_pred             CccccccccCHHHHH---HHHhcCCeEEecCc-cCCCCCCCccccCCChhHHHHHHHhh-hcCC--cceeeeec---cCC
Confidence            489999986422221   23457899988862 2221      1122  2233333322 2223  89988765   323


Q ss_pred             CCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCC--CCCCCChhhhHHHHHHHH
Q 019093           80 TSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEV--TDPIVDIFDREKVFIDTI  157 (346)
Q Consensus        80 ~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~--~~~~~~~~~~E~~av~~~  157 (346)
                      ...+-|.+.+++| .+|+|++-.       ++.. . ..+..+|..+.+.+.-+.+|...  +.-              .
T Consensus        71 s~~~~l~eqi~aG-a~GlKiHED-------wGat-p-~~Id~~L~vad~~dvqv~iHtDtlNE~G--------------f  126 (389)
T d1e9yb2          71 SNDASLADQIEAG-AIGFKIHED-------WGTT-P-SAINHALDVADKYDVQVAIHTDTLNEAG--------------C  126 (389)
T ss_dssp             SCHHHHHHHHHTT-CSEEEECGG-------GCCC-H-HHHHHHHHHHHHTTCEEEECCCTTCSSC--------------C
T ss_pred             CChHHHHHHHHhc-cceeecccc-------ccCC-H-HHHHHHHHHHHhhCceEEecCCCccccc--------------c
Confidence            4577888999999 689999853       3322 2 67889999999999999999873  321              1


Q ss_pred             HHHHHHhCCCCcEEEEccCCHH---HHHHHHccCCCe-eEEEccc
Q 019093          158 LQPLIQRLPQLKVVMEHITTMD---AVKFVESCKEGF-VAATVTP  198 (346)
Q Consensus       158 l~~~la~~~g~~lhi~HvSt~~---~l~~i~~akg~~-vt~Et~p  198 (346)
                      ++..++..-|..+|..|+--+.   +=++|+-+-.-+ +-..|.|
T Consensus       127 ve~T~~a~~gRtiH~~HtEGaGGGHAPDii~~~~~~nvLpsSTnP  171 (389)
T d1e9yb2         127 VEDTMAAIAGRTMHTFHTEGAGGGHAPDIIKVAGEHNILPASTNP  171 (389)
T ss_dssp             HHHHHHHHTTCCEEETTTTSTTSCSTTTGGGGGGSTTEEEEECGG
T ss_pred             hhhHHHHhCCCcceeeecCCCCCCCccHHHHHccCCCccCCCCCC
Confidence            2224566668899999986544   345555543112 3444544

>d2paja2 c.1.9.9 (A:70-405) Hypothetical protein GOS_1943094 {Environmental samples}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: SAH/MTA deaminase-like
domain: Hypothetical protein GOS 1943094
species: Environmental samples

Probab=97.47  E-value=0.0024  Score=56.42  Aligned_cols=150  Identities=13%  Similarity=0.073  Sum_probs=77.7

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCC-hhhhH-HHHHHHHHHHHHHhCCCCcEEEEccC--CHHHHHHHHccCCCee
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVD-IFDRE-KVFIDTILQPLIQRLPQLKVVMEHIT--TMDAVKFVESCKEGFV  192 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~-~~~~E-~~av~~~l~~~la~~~g~~lhi~HvS--t~~~l~~i~~akg~~v  192 (346)
                      ..+....+.+.+.+.++.+|+....-... ..... ...+.. +  ......+..+.+.|..  +.+.+++++..   ..
T Consensus       160 ~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~h~~~~~~~~~~~l~~~---~~  233 (336)
T d2paja2         160 REMRETAAVARRLGLRMHSHLSETVGYQDSAYSMYGKSPVAF-C--GEHDWLGSDVWYAHLVKVDADEIALLAQT---GT  233 (336)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECC-------------CCCHHHH-H--HHTTCCSTTEEEESCCSCCHHHHHHHHHH---TC
T ss_pred             HHHHHHHhhhhccCCceeeeccccchhhHHHHHhcCCccccc-c--ccccccccccccccceecchHHHHHHhhc---cc
Confidence            67888889999999999999875432110 00000 001111 1  2344556778888875  66777777653   34


Q ss_pred             EEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccch-hH
Q 019093          193 AATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNA-PV  271 (346)
Q Consensus       193 t~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~-e~  271 (346)
                      ..-.||..-..         .   ..-.||++.-      +   ..|.-=. +|||..+-+.          ...-+ |.
T Consensus       234 ~~~~~p~~~~~---------~---~~~~~~~~~l------~---~~Gv~va-lGTD~~~s~~----------~~d~~~em  281 (336)
T d2paja2         234 GVAHCPQSNGR---------L---GSGICPVREM------A---DAGVPVS-IGVDGAASNE----------AADMISEV  281 (336)
T ss_dssp             EEEECHHHHHC---------C--------CCTTH------H---HHTCCEE-ECCCHHHHCS----------CCSHHHHH
T ss_pred             cceeccchhhc---------c---CccccchhhH------H---hcCCeEE-EEcCCCCCCC----------cccHHHHH
Confidence            55677743211         1   1123566532      2   3365445 8999543110          01111 22


Q ss_pred             HHHHHHHH------------------HHhcCCHHHHHHHHchhhhhhcCCC
Q 019093          272 ALSLYAKV------------------FEEMGALDKLEAFTSFNGPDFYGLP  304 (346)
Q Consensus       272 ~lp~l~~~------------------~~~~~~l~~lv~~~s~nPAki~gl~  304 (346)
                      .+.+++..                  .....+..++.++.+.|+||.+||+
T Consensus       282 r~a~~~~r~~~~~~~~~~~~~~~~~~~~~~~t~~eal~~aT~~gA~aLgld  332 (336)
T d2paja2         282 HMTWLAQRARLGMLAQPAYRGGSFEGGAGAASIAEVIHWGTAGGARVMGLD  332 (336)
T ss_dssp             HHHHHHHHHTC-------------------CCHHHHHHHHTHHHHHHHTCT
T ss_pred             HHHHHHHHHhhccccccccccccccCCCCCCCHHHHHHHHHHHHHHHhCcc
Confidence            22222110                  0112368899999999999999994

>d1ejxc2 c.1.9.2 (C:1130-1422,C:1476-1567) alpha-subunit of urease, catalytic domain {Klebsiella aerogenes [TaxId: 28451]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: alpha-subunit of urease, catalytic domain
domain: alpha-subunit of urease, catalytic domain
species: Klebsiella aerogenes [TaxId: 28451]

Probab=97.46  E-value=0.0002  Score=64.43  Aligned_cols=149  Identities=17%  Similarity=0.175  Sum_probs=90.9

Q ss_pred             ccccceecCCCccccccccccCCceeEEEeCCCCCCC------CCcH--HHHHHHHHHHHhhCCCCccEEEEEEEEeCCC
Q 019093            8 PDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPP------ITTT--AAAVAYRESILKALPASSNFTPLMTLYLTDT   79 (346)
Q Consensus         8 ~ID~HvH~r~g~~~ke~~~s~sGGvTtvv~mPnt~p~------~~~~--~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~   79 (346)
                      +||.||||=.++...   +..++|+||++-.- |.|.      ..++  -.+....+.. +.-+  ++|+|.+-   ...
T Consensus         1 GiDtHvHfi~Pqq~~---~al~sGiTT~iGgG-tGPa~Gt~att~tpg~~~~~~ml~a~-d~~P--~N~g~~gk---Gn~   70 (385)
T d1ejxc2           1 GIDTHIHWICPQQAE---EALVSGVTTMVGGG-TGPAAGTHATTCTPGPWYISRMLQAA-DSLP--VNIGLLGK---GNV   70 (385)
T ss_dssp             EEEEEEECSCTTHHH---HHHHTTEEEEEEEC-CSSSHHHHHSSCCCHHHHHHHHHHHH-TTSS--SEEEEEEE---CCC
T ss_pred             CccccccccCHHHHH---HHHhcCCeeeecCc-cCCCCCCCCcCcCCCHHHHHHHHHhh-hhCC--cceeeeec---ccc
Confidence            489999986432221   23458999988862 2222      1122  2233333322 2223  89988765   223


Q ss_pred             CCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHH
Q 019093           80 TSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQ  159 (346)
Q Consensus        80 ~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~  159 (346)
                      ...+-|.+.+++| .+|+|++-.       ++.. . ..+..+|..+.+.+.-|.+|...-.-        .-.+    +
T Consensus        71 s~~~~l~eqi~AG-a~GlKiHED-------wGat-p-a~id~~L~vad~~dvqv~iHtDtlNE--------~gfv----e  128 (385)
T d1ejxc2          71 SQPDALREQVAAG-VIGLKIHED-------WGAT-P-AAIDCALTVADEMDIQVALHSDTLNE--------SGFV----E  128 (385)
T ss_dssp             SSHHHHHHHHHHT-CSEEEEEGG-------GCCC-H-HHHHHHHHHHHHHTCEEEEECCTTCS--------SCCH----H
T ss_pred             CChHHHHHHHHhh-hceecCCcc-------cccC-h-HHHHHHHHhHhhcCceEEEecccccc--------cccc----h
Confidence            3567788888999 689999853       3322 2 67889999999999999999984210        0012    2


Q ss_pred             HHHHhCCCCcEEEEccCCHH---HHHHHHccC
Q 019093          160 PLIQRLPQLKVVMEHITTMD---AVKFVESCK  188 (346)
Q Consensus       160 ~~la~~~g~~lhi~HvSt~~---~l~~i~~ak  188 (346)
                      +.++..-|..+|..|+--+.   +=++|+-+.
T Consensus       129 dT~~a~~gRtiH~~H~EGaGGGHAPDii~~~~  160 (385)
T d1ejxc2         129 DTLAAIGGRTIHTFHTEGAGGGHAPDIITACA  160 (385)
T ss_dssp             HHHHHHTTCCEEESSTTSTTSSSTTTGGGGGG
T ss_pred             hhHHHhCCCceeeeecccCCCCccchhhHhhc
Confidence            24555568999999986422   234555443

>d1p1ma2 c.1.9.9 (A:50-330) Hypothetical protein TM0936, probable catalytic domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: SAH/MTA deaminase-like
domain: Hypothetical protein TM0936, probable catalytic domain
species: Thermotoga maritima [TaxId: 2336]

Probab=97.42  E-value=0.0059  Score=53.18  Aligned_cols=143  Identities=18%  Similarity=0.206  Sum_probs=83.8

Q ss_pred             HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccC--CHHHHHHHHccCCCeeEE
Q 019093          117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHIT--TMDAVKFVESCKEGFVAA  194 (346)
Q Consensus       117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvS--t~~~l~~i~~akg~~vt~  194 (346)
                      +.+.++++.+++.|+++.+|+-...-  .....+     .+.   -....+-++.+.|..  +.+.++++++.   .+.+
T Consensus       132 ~~~~~~~~~A~~~~~~i~iH~~e~~~--e~~~~~-----~l~---~~g~l~~~~~~~H~~~~~~~di~~la~~---~~~v  198 (281)
T d1p1ma2         132 EYLKRVFDTAKSLNAPVTIHLYETSK--EEYDLE-----DIL---NIGLKEVKTIAAHCVHLPERYFGVLKDI---PFFV  198 (281)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEESCSTT--CCCCTH-----HHH---TTTTTTSCEEEEECTTCCGGGTTTTTTS---SEEE
T ss_pred             hhhHHHHHHHhccCccccccccCCcc--cchhHH-----HHH---HcCCCCccccccceeeecHHHHHHHHhc---CCcc
Confidence            78899999999999999999643211  001111     111   122346778788877  56677777753   5778


Q ss_pred             EccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccch--hHH
Q 019093          195 TVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNA--PVA  272 (346)
Q Consensus       195 Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~--e~~  272 (346)
                      -.||-.      .+.- +.+  .   ||         +.+.+..|.-=. ||||..+-..           ...+  |..
T Consensus       199 v~cP~s------n~~l-g~~--~---~~---------~~~~~~~Gv~v~-LGTD~~~s~~-----------~~d~~~em~  245 (281)
T d1p1ma2         199 SHNPAS------NLKL-GNG--I---AP---------VQRMIEHGMKVT-LGTDGAASNN-----------SLNLFFEMR  245 (281)
T ss_dssp             EECHHH------HHHT-TCC--C---CC---------HHHHHHTTCEEE-ECCCCTTTTS-----------CCCHHHHHH
T ss_pred             ccccch------hhhh-ccc--c---hh---------HHHHHhCCCeEE-EECCCCCCCC-----------CcCHHHHHH
Confidence            889942      2211 111  1   33         334455576556 8999644321           0112  233


Q ss_pred             HHHHHHHHHh--cCCHHHHHHHHchhhhhhcCCCC
Q 019093          273 LSLYAKVFEE--MGALDKLEAFTSFNGPDFYGLPR  305 (346)
Q Consensus       273 lp~l~~~~~~--~~~l~~lv~~~s~nPAki~gl~~  305 (346)
                      +..++....+  ..+.+++.++.+.|+||.+||+.
T Consensus       246 ~a~~~~~~~~~~~~~~~~~l~~aT~~gA~aLGl~~  280 (281)
T d1p1ma2         246 LASLLQKAQNPRNLDVNTCLKMVTYDGAQAMGFKS  280 (281)
T ss_dssp             HHHHHHHTTCTTSSCHHHHHHHHTHHHHHHHTCSC
T ss_pred             HHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhCCCC
Confidence            3333221111  24678999999999999999953

>d2ffia1 c.1.9.15 (A:10-280) Putative 2-pyrone-4,6-dicarboxylic acid hydrolase PP1699 {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: PP1699/LP2961-like
domain: Putative 2-pyrone-4,6-dicarboxylic acid hydrolase PP1699
species: Pseudomonas putida [TaxId: 303]

Probab=97.40  E-value=0.0042  Score=52.02  Aligned_cols=54  Identities=22%  Similarity=0.285  Sum_probs=34.3

Q ss_pred             CHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCC
Q 019093           81 SPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVT  140 (346)
Q Consensus        81 ~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~  140 (346)
                      ......++...+ ..+++.....   .......+  ...+++++.+.+.+.++.+|+.-.
T Consensus        85 ~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  138 (271)
T d2ffia1          85 EQATLAEMARLG-VRGVRLNLMG---QDMPDLTG--AQWRPLLERIGEQGWHVELHRQVA  138 (271)
T ss_dssp             CHHHHHHHHTTT-CCEEECCCSS---SCCCCTTS--TTTHHHHHHHHHHTCEEEECSCTT
T ss_pred             chHHHHHHHHhh-hccceecccc---ccCCCccc--HhHHHHHHHHHHhCCCcccccCcc
Confidence            344566666666 4566654421   12222333  467888999999999999998754

>d1j6oa_ c.1.9.12 (A:) Hypothetical protein TM0667 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: TatD Mg-dependent DNase-like
domain: Hypothetical protein TM0667
species: Thermotoga maritima [TaxId: 2336]

Probab=97.22  E-value=0.0045  Score=53.89  Aligned_cols=233  Identities=18%  Similarity=0.051  Sum_probs=110.5

Q ss_pred             ccccceecCC-C-cccccc-cccc-CCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCC---
Q 019093            8 PDDWHLHLRD-G-DLLKAV-VPHS-VSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTT---   80 (346)
Q Consensus         8 ~ID~HvH~r~-g-~~~ke~-~~s~-sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~---   80 (346)
                      +||.|+|+.. . ..+.+. +... ..||+.++...      ++++..+...+.++. .   -.+..  ++++.|..   
T Consensus         5 lIDsH~HLd~~~~~~d~~~vi~~a~~~gV~~ii~~~------~~~~~~~~~~~la~~-~---~~i~~--a~GiHP~~~~~   72 (260)
T d1j6oa_           5 MVDTHAHLHFHQFDDDRNAVISSFEENNIEFVVNVG------VNLEDSKKSLDLSKT-S---DRIFC--SVGVHPHDAKE   72 (260)
T ss_dssp             EEEEEECTTSGGGTTTHHHHHHTTTTTTEEEEEEEC------SSHHHHHHHHHHHTT-C---TTEEE--EECCCGGGGGG
T ss_pred             cEEeccCCCChhhCcCHHHHHHHHHHCCCCEEEEec------CCHHHHHHHHHHHHh-c---ccccc--ccccChhhccc
Confidence            6999999864 2 112222 2222 37899887643      234444444443322 1   12322  33334421   


Q ss_pred             -C---HHHHHHHHHcCCeeEE-EEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHH
Q 019093           81 -S---PDEIKLARKTGVVFAV-KLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFID  155 (346)
Q Consensus        81 -~---~~el~~l~~~G~v~~~-Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~  155 (346)
                       .   .+.+..+.+..-++++ .+=+.+....+.... .. ..+.+.++.++++++|+++||-+..         ...+ 
T Consensus        73 ~~~~~~~~l~~~~~~~~vvaIGEiGLD~~~~~~~~~~-Q~-~vF~~ql~lA~~~~lPviiH~r~a~---------~~~~-  140 (260)
T d1j6oa_          73 VPEDFIEHLEKFAKDEKVVAIGETGLDFFRNISPAEV-QK-RVFVEQIELAGKLNLPLVVHIRDAY---------SEAY-  140 (260)
T ss_dssp             CCTTHHHHHHHHTTSTTEEEEEEEEEETTTCSSCHHH-HH-HHHHHHHHHHHHHTCCEEEEEESCH---------HHHH-
T ss_pred             ccchhhhhhHHHHhhCCeeeEeeccccccccccHHHH-HH-HHHHHHHHHHHhcCcceEEeeccch---------HHHH-
Confidence             1   2344555443324333 221111001110000 01 4577888999999999999998642         1111 


Q ss_pred             HHHHHHHHhCCCCcEEEEccC--CHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCC---CChhhHH
Q 019093          156 TILQPLIQRLPQLKVVMEHIT--TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVL---KREIHRQ  230 (346)
Q Consensus       156 ~~l~~~la~~~g~~lhi~HvS--t~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPL---R~~~d~~  230 (346)
                      .++  .-......+++| |.=  +.+.++.+.+. |.  +                       +-+++++   |.++-|+
T Consensus       141 ~il--~~~~~~~~~~i~-H~fsG~~~~~~~~l~~-g~--~-----------------------is~~g~~~~~~~~~~~~  191 (260)
T d1j6oa_         141 EIL--RTESLPEKRGVI-HAFSSDYEWAKKFIDL-GF--L-----------------------LGIGGPVTYPKNEALRE  191 (260)
T ss_dssp             HHH--HHSCCCSSCEEE-TTCCSCHHHHHHHHHH-TE--E-----------------------EEECGGGGCTTCHHHHH
T ss_pred             HHH--HhhcCCCCCeee-eccccCHHHHHHHHhC-CC--c-----------------------eeeccccccchHHHHHH
Confidence            222  112223345554 543  44444444322 22  1                       1222211   1222233


Q ss_pred             HHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHh--cCCHHHHHHHHchhhhhhcC
Q 019093          231 AVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEE--MGALDKLEAFTSFNGPDFYG  302 (346)
Q Consensus       231 aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~--~~~l~~lv~~~s~nPAki~g  302 (346)
                       +...+-.+.|  ++-||- |+...+.-.     |-.+-...++.+...+.+  ..+.+++.+.+..|.-|+|+
T Consensus       192 -~v~~iPldrl--llETD~-P~l~p~~~~-----~~~n~P~~l~~v~~~iA~~~~~~~~ev~~~~~~N~~rlF~  256 (260)
T d1j6oa_         192 -VVKRVGLEYI--VLETDC-PFLPPQPFR-----GKRNEPKYLKYVVETISQVLGVPEAKVDEATTENARRIFL  256 (260)
T ss_dssp             -HHHHHCGGGE--EECCCB-TSCCCGGGT-----TSCCCGGGHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHH
T ss_pred             -HHHhcccceE--EEecCC-CCCCCcccC-----CCCCChHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHH
Confidence             3344544433  357884 775333211     112223345655443322  44899999999999999986

>d2hbva1 c.1.9.15 (A:3-333) 2-amino-3-carboxymuconate 6-semialdehyde decarboxylase NbaD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: PP1699/LP2961-like
domain: 2-amino-3-carboxymuconate 6-semialdehyde decarboxylase NbaD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=97.09  E-value=0.0036  Score=55.69  Aligned_cols=200  Identities=15%  Similarity=0.183  Sum_probs=101.6

Q ss_pred             cEEEEEEEEeCCCC---CHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCC
Q 019093           67 NFTPLMTLYLTDTT---SPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPI  143 (346)
Q Consensus        67 d~~~~~~~~~~~~~---~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~  143 (346)
                      .|..++.+  ....   ..+|+.++++.| ..|+|++...    .+....|  ..++.+++.+.++|++|++|+.+....
T Consensus       112 R~~~~~~v--~~~~~~~a~~el~r~~~~g-~~g~~l~~~~----~~~~~~d--~~~~p~~~~~~e~~~pv~iH~~~~~~~  182 (331)
T d2hbva1         112 RIKVLAQV--PLQDLDLACKEASRAVAAG-HLGIQIGNHL----GDKDLDD--ATLEAFLTHCANEDIPILVHPWDMMGG  182 (331)
T ss_dssp             TEEECBCC--CTTSHHHHHHHHHHHHHHT-CCCEEEESCB----TTBCTTS--HHHHHHHHHHHHTTCCEEEECCSCSCT
T ss_pred             cceeeeEe--ecccchhhhhHHHHhhhhc-ceeeeecccc----cCccccc--chhhHHHHHHhccCCceEEecCCCCCc
Confidence            56655444  3321   234778888888 6799987532    2333445  789999999999999999998764321


Q ss_pred             C---C--h-----hhhH-HHHHHHHH-HHHHHhCCC-CcEEEEccCCH--HHHHHHHcc-CCCeeEEEccchhhccchhh
Q 019093          144 V---D--I-----FDRE-KVFIDTIL-QPLIQRLPQ-LKVVMEHITTM--DAVKFVESC-KEGFVAATVTPQHLVLNRNA  207 (346)
Q Consensus       144 ~---~--~-----~~~E-~~av~~~l-~~~la~~~g-~~lhi~HvSt~--~~l~~i~~a-kg~~vt~Et~ph~L~l~~~~  207 (346)
                      .   .  .     ...+ ..+...++ .-.+.++++ .++.+.|-...  .-+..+... .......+-+.+.    ...
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~r~P~~~~v~~~hg~g~~~~~~~r~~~~~~~~~~~~~~~~~~----~~~  258 (331)
T d2hbva1         183 QRMKKWMLPWLVAMPAETQLAILSLILSGAFERIPKSLKICFGHGGGSFAFLLGRVDNAWRHRDIVREDCPRP----PSE  258 (331)
T ss_dssp             TTTCSTTHHHHTHHHHHHHHHHHHHHHTTGGGTSCTTCCEEESGGGTTHHHHHHHHHHHHHHCHHHHTTCCSC----GGG
T ss_pred             ccccccccccccccchhhhhHhhhhhccchHhhCCCccEEEEecCccccHHHHHHHHhhhhccccchhhcccC----hhh
Confidence            1   0  0     1112 22222221 112467786 45555554321  111111110 0000000011110    011


Q ss_pred             hccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHh-cCCH
Q 019093          208 LFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEE-MGAL  286 (346)
Q Consensus       208 ~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~-~~~l  286 (346)
                      +.     ..+.......++...+.+++.+-.+.|  +.|||. ||...+...     +            ..... .++-
T Consensus       259 ~~-----~~~~~~~~~~~~~~l~~~~~~~G~dri--lfGSD~-P~~~~~~~~-----~------------~~~~~~~l~~  313 (331)
T d2hbva1         259 YV-----DRFFVDSAVFNPGALELLVSVMGEDRV--MLGSDY-PFPLGEQKI-----G------------GLVLSSNLGE  313 (331)
T ss_dssp             GG-----GGCEEECCCSSHHHHHHHHHHHCGGGE--ECCCCB-TSTTSCSST-----T------------HHHHTSSCCH
T ss_pred             hh-----cccccccccCCHHHHHHHHHHhCCCeE--EEeCCC-CCCCcchhH-----H------------HHHHhCCCCH
Confidence            11     111122223345556667777733444  379995 875333210     0            01111 3477


Q ss_pred             HHHHHHHchhhhhhcCCC
Q 019093          287 DKLEAFTSFNGPDFYGLP  304 (346)
Q Consensus       287 ~~lv~~~s~nPAki~gl~  304 (346)
                      +..-.++..|++|+|||+
T Consensus       314 ~~~~~I~~~NA~rl~~Ld  331 (331)
T d2hbva1         314 SAKDKIISGNASKFFNIN  331 (331)
T ss_dssp             HHHHHHHTHHHHHHHTCC
T ss_pred             HHHHHHHhHHHHHHhCcC
Confidence            888999999999999984

>d1ejxc1 b.92.1.1 (C:1002-1129,C:1423-1475) alpha-Subunit of urease {Klebsiella aerogenes [TaxId: 28451]}

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: alpha-Subunit of urease
domain: alpha-Subunit of urease
species: Klebsiella aerogenes [TaxId: 28451]

Probab=96.79  E-value=0.00014  Score=59.57  Aligned_cols=33  Identities=6%  Similarity=-0.222  Sum_probs=24.6

Q ss_pred             eEEecCccccceecCCCccccccccccCCceeEEEe
Q 019093            2 ELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIV   37 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~g~~~ke~~~s~sGGvTtvv~   37 (346)
                      ++|+||+||.||||++....++.|.+   |+|+++-
T Consensus       123 ~ivtpG~ID~HvHf~~p~~~~eal~s---G~tt~ig  155 (181)
T d1ejxc1         123 KIVTAGSIEVGKLADLVVWSPAFFGV---KPATVIK  155 (181)
T ss_dssp             CEEEECSSCTTSBCCEEEECGGGTTT---SCSEEEE
T ss_pred             cEEeeeeeecceEEeeeeeehhhhcc---chheEEe
Confidence            58999999999999985445555554   5676654

>d1xwya1 c.1.9.12 (A:1-260) Deoxyribonuclease TatD (MttC) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: TatD Mg-dependent DNase-like
domain: Deoxyribonuclease TatD (MttC)
species: Escherichia coli [TaxId: 562]

Probab=96.51  E-value=0.037  Score=47.71  Aligned_cols=35  Identities=20%  Similarity=0.213  Sum_probs=25.7

Q ss_pred             hHHHHHHHHHHHh-c-CCHHHHHHHHchhhhhhcCCC
Q 019093          270 PVALSLYAKVFEE-M-GALDKLEAFTSFNGPDFYGLP  304 (346)
Q Consensus       270 e~~lp~l~~~~~~-~-~~l~~lv~~~s~nPAki~gl~  304 (346)
                      ...++.+.+.+.+ + .+.+++.+.+..|--|+|||.
T Consensus       223 P~~l~~v~~~lA~~~g~~~~ev~~~~~~N~~~~f~l~  259 (260)
T d1xwya1         223 PAHLPHILQRIAHWRGEDAAWLAATTDANVKTLFGIA  259 (260)
T ss_dssp             GGGHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHCCC
T ss_pred             hHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHhCCC
Confidence            3346665544333 3 489999999999999999983

>d2p9ba1 b.92.1.10 (A:9-70,A:395-450) Uncharacterized protein BL1453 {Bifidobacterium longum [TaxId: 216816]}

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: Imidazolonepropionase-like
domain: Uncharacterized protein BL1453
species: Bifidobacterium longum [TaxId: 216816]

Probab=96.46  E-value=0.00077  Score=51.78  Aligned_cols=16  Identities=6%  Similarity=-0.122  Sum_probs=14.6

Q ss_pred             eEEecCccccceecCC
Q 019093            2 ELTLTQPDDWHLHLRD   17 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~   17 (346)
                      ++|+||+||+|+|+..
T Consensus        59 k~v~PGlid~H~Hl~~   74 (118)
T d2p9ba1          59 KIVMLEVGKSADLLVL   74 (118)
T ss_dssp             CEEECCTTSBCCEEEE
T ss_pred             cEEEeeecceeEEEEe
Confidence            5899999999999875

>d2fvka1 b.92.1.3 (A:2-56,A:441-541) Dihydropyrimidine amidohydrolase Pyd2 {Yeast (Saccharomyces kluyveri) [TaxId: 4934]}

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase)
domain: Dihydropyrimidine amidohydrolase Pyd2
species: Yeast (Saccharomyces kluyveri) [TaxId: 4934]

Probab=95.58  E-value=0.0024  Score=51.23  Aligned_cols=77  Identities=14%  Similarity=0.196  Sum_probs=53.4

Q ss_pred             HHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHchhhhhhcCCCCCCccEEEE
Q 019093          234 SAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLPRNTSKIKLT  313 (346)
Q Consensus       234 ~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~~~~l~~lv~~~s~nPAki~gl~~kdAdlvi~  313 (346)
                      -++.+|.|.. |++++.+++.++.-   ...|..-                           -|. +=|+-  ||++.++
T Consensus        23 i~i~~g~I~~-ig~~~~~~~~~~vi---Da~G~~V---------------------------~p~-~pg~~--d~Hih~~   68 (156)
T d2fvka1          23 IAVNNGKVQL-IAASIDPSLGSEVI---DAEGAFI---------------------------TPI-LPGVS--DADLVIW   68 (156)
T ss_dssp             EEEETTEEEE-EESCCCGGGEEEEE---ECTTCEE---------------------------EEC-CTTTS--BCCEEEE
T ss_pred             EEEECCEEEE-ecCCCCCCCCCEEE---ECCCCEE---------------------------eee-ccccc--ccceEEE
Confidence            4688999999 99999887543321   1112110                           010 00331  7888888


Q ss_pred             e----------cceeecCCccccCCcccccCCCcEEEEEEEE
Q 019093          314 K----------IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL  345 (346)
Q Consensus       314 d----------~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~  345 (346)
                      +          .+++|+++.++++++|+|| +|++++|+|.+
T Consensus        69 ~~~~~~~~~~~~~~tIs~~~~~~~~~~t~~-eg~~~~G~~~~  109 (156)
T d2fvka1          69 YPDDSKKEYNSKPKLITNKLMEHNCDYTPF-EGIEIKNWPRY  109 (156)
T ss_dssp             CCSSCCCCCTTSCSBCCTGGGCSSSSCCTT-TTCBCSCCEEE
T ss_pred             eeccccccccccceEEehhhcccccccccc-eeEEEccceEE
Confidence            6          3578999999999999999 89999999875

>d1onwa1 b.92.1.7 (A:1-62,A:347-389) Isoaspartyl dipeptidase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: Isoaspartyl dipeptidase
domain: Isoaspartyl dipeptidase
species: Escherichia coli [TaxId: 562]

Probab=95.02  E-value=0.0032  Score=47.15  Aligned_cols=32  Identities=3%  Similarity=-0.247  Sum_probs=21.5

Q ss_pred             eEEecCccccce---ecCC-CccccccccccCCceeEEE
Q 019093            2 ELTLTQPDDWHL---HLRD-GDLLKAVVPHSVSHYGRAI   36 (346)
Q Consensus         2 ~~vlPG~ID~Hv---H~r~-g~~~ke~~~s~sGGvTtvv   36 (346)
                      ++|+||+||.|.   |++. +...++.+.+   |.|++.
T Consensus        58 ~~v~PG~ID~H~h~~~~~~p~~~~~~~~~~---G~~~v~   93 (105)
T d1onwa1          58 QILCPEILPGNDADLLVMTPELRIEQVYAR---GKLMVK   93 (105)
T ss_dssp             CEEEESCCTTSBCCEEEECTTCCEEEEEET---TEEEEE
T ss_pred             CEEeCCEeecccCcceecCCCcchHHHhhc---ceEEec
Confidence            589999999995   6666 5555555544   455543

>d1yrra1 b.92.1.5 (A:1-53,A:351-382) N-acetylglucosamine-6-phosphate deacetylase, NagA {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: N-acetylglucosamine-6-phosphate deacetylase, NagA
domain: N-acetylglucosamine-6-phosphate deacetylase, NagA
species: Escherichia coli [TaxId: 562]

Probab=94.65  E-value=0.0037  Score=44.86  Aligned_cols=16  Identities=0%  Similarity=-0.226  Sum_probs=13.9

Q ss_pred             eEEecCccccceecCC
Q 019093            2 ELTLTQPDDWHLHLRD   17 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~   17 (346)
                      ++|+||+||.|||.-.
T Consensus        49 ~~l~PGlid~hvH~~~   64 (85)
T d1yrra1          49 AILSPTLAAGKVANLT   64 (85)
T ss_dssp             CEEEESCCTTSBCCEE
T ss_pred             cEEEcccEecceeecc
Confidence            5899999999999754

>d2p9ba2 c.1.9.17 (A:71-394) Uncharacterized protein BL1453 {Bifidobacterium longum [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Imidazolonepropionase-like
domain: Uncharacterized protein BL1453
species: Bifidobacterium longum [TaxId: 216816]

Probab=94.27  E-value=0.0068  Score=50.83  Aligned_cols=23  Identities=4%  Similarity=-0.130  Sum_probs=20.3

Q ss_pred             cCCHHHHHHHHchhhhhhcCCCC
Q 019093          283 MGALDKLEAFTSFNGPDFYGLPR  305 (346)
Q Consensus       283 ~~~l~~lv~~~s~nPAki~gl~~  305 (346)
                      ..+..+++++.+.||||.+|+..
T Consensus       298 Gls~~eaL~~aT~n~A~~lgl~d  320 (324)
T d2p9ba2         298 GFSPAEALHAATAVNASILGVDA  320 (324)
T ss_dssp             CCCHHHHHHHHTHHHHHHTTCTT
T ss_pred             CCCHHHHHHHHHHHHHHHhCCCc
Confidence            45899999999999999999953

>d3be7a2 c.1.9.18 (A:57-359) Zn-dependent arginine carboxypeptidase {Unidentified organism [TaxId: 32644]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Zn-dependent arginine carboxypeptidase-like
domain: Zn-dependent arginine carboxypeptidase
species: Unidentified organism [TaxId: 32644]

Probab=93.99  E-value=0.013  Score=48.84  Aligned_cols=22  Identities=5%  Similarity=0.034  Sum_probs=19.7

Q ss_pred             cCCHHHHHHHHchhhhhhcCCC
Q 019093          283 MGALDKLEAFTSFNGPDFYGLP  304 (346)
Q Consensus       283 ~~~l~~lv~~~s~nPAki~gl~  304 (346)
                      ..+..++++..+.||||.+||+
T Consensus       279 Gls~~eaL~~aT~n~A~~lGl~  300 (303)
T d3be7a2         279 GMTPLEAIQASTIKTATLFGIE  300 (303)
T ss_dssp             TCCHHHHHHTTTHHHHHHHTCS
T ss_pred             CCCHHHHHHHHHHHHHHHhCCc
Confidence            3588999999999999999994

>d2r8ca2 c.1.9.18 (A:58-368) Uncharacterized protein EAJ56179 {Unidentified organism [TaxId: 32644]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Zn-dependent arginine carboxypeptidase-like
domain: Uncharacterized protein EAJ56179
species: Unidentified organism [TaxId: 32644]

Probab=93.00  E-value=0.018  Score=48.21  Aligned_cols=25  Identities=12%  Similarity=0.199  Sum_probs=21.2

Q ss_pred             HHhcCCHHHHHHHHchhhhhhcCCC
Q 019093          280 FEEMGALDKLEAFTSFNGPDFYGLP  304 (346)
Q Consensus       280 ~~~~~~l~~lv~~~s~nPAki~gl~  304 (346)
                      +++..+..++++..+.||||.+|+.
T Consensus       283 ~~~gls~~eaL~~ATi~~A~aLg~~  307 (311)
T d2r8ca2         283 LAEVLSPAEVIASATIVSAEVLGMQ  307 (311)
T ss_dssp             HTTTSCHHHHHHHTTHHHHHHTTCT
T ss_pred             HHcCCCHHHHHHHHHHHHHHHHCCC
Confidence            3445688899999999999999995

>d2qs8a2 c.1.9.18 (A:64-373) Xaa-Pro dipeptidase {Alteromonas macleodii [TaxId: 28108]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Zn-dependent arginine carboxypeptidase-like
domain: Xaa-Pro dipeptidase
species: Alteromonas macleodii [TaxId: 28108]

Probab=92.95  E-value=0.024  Score=47.32  Aligned_cols=56  Identities=14%  Similarity=0.040  Sum_probs=35.6

Q ss_pred             HHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHh-cCCHHHHHHHHchhhhhhcCCC
Q 019093          232 VVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEE-MGALDKLEAFTSFNGPDFYGLP  304 (346)
Q Consensus       232 L~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~-~~~l~~lv~~~s~nPAki~gl~  304 (346)
                      +.+..+.|.--+ +|||+ |..          ++..-.+    -+.. +++ ..+..++++..+.||||.|||.
T Consensus       250 ~~~l~~~Gv~v~-lGTD~-~~~----------~~~~~~~----el~~-~~~~Gls~~eaL~~aT~~~A~~LGl~  306 (310)
T d2qs8a2         250 FRKAYEKGVKIA-FGTDA-GVQ----------KHGTNWK----EFVY-MVENGMPAMKAIQSATMETAKLLRIE  306 (310)
T ss_dssp             HHHHHHHTCCBC-CCCCB-TTB----------CTTCTTH----HHHH-HHHTTCCHHHHHHHTTHHHHHHTTCT
T ss_pred             HHHHHHCCCeEE-EecCC-CCC----------CccHHHH----HHHH-HHHcCCCHHHHHHHHHHHHHHHhCcC
Confidence            455566677777 89997 321          1111111    1111 233 3589999999999999999994

>d2ooda2 c.1.9.9 (A:73-397) Guanine deaminase {Bradyrhizobium japonicum [TaxId: 375]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: SAH/MTA deaminase-like
domain: Guanine deaminase
species: Bradyrhizobium japonicum [TaxId: 375]

Probab=92.52  E-value=0.0096  Score=51.34  Aligned_cols=23  Identities=4%  Similarity=-0.224  Sum_probs=20.0

Q ss_pred             cCCHHHHHHHHchhhhhhcCCCC
Q 019093          283 MGALDKLEAFTSFNGPDFYGLPR  305 (346)
Q Consensus       283 ~~~l~~lv~~~s~nPAki~gl~~  305 (346)
                      ..+..++++..+.|||+.+|+..
T Consensus       299 gl~~~eal~~AT~ngA~aLG~~d  321 (325)
T d2ooda2         299 KLSPYRGFWSVTLGGAEGLYIDD  321 (325)
T ss_dssp             CCCHHHHHHHTTHHHHHHTTCTT
T ss_pred             CCCHHHHHHHHHHHHHHHhCCCc
Confidence            34788999999999999999953

>d2r8ca1 b.92.1.9 (A:2-57,A:369-414) Uncharacterized protein EAJ56179 {Unidentified organism [TaxId: 32644]}

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: Zn-dependent arginine carboxypeptidase-like
domain: Uncharacterized protein EAJ56179
species: Unidentified organism [TaxId: 32644]

Probab=85.31  E-value=0.12  Score=37.65  Aligned_cols=13  Identities=0%  Similarity=-0.253  Sum_probs=10.9

Q ss_pred             eEEecCcccccee
Q 019093            2 ELTLTQPDDWHLH   14 (346)
Q Consensus         2 ~~vlPG~ID~HvH   14 (346)
                      ++|+||+||.|+|
T Consensus        52 ~~v~PGlid~h~~   64 (102)
T d2r8ca1          52 KTIMPRIVPGAHA   64 (102)
T ss_dssp             CEEEESCCTTSBC
T ss_pred             CEEECceeeheee
Confidence            5899999998764

>d1ynya1 b.92.1.3 (A:2-52,A:385-460) D-hydantoinase {Bacillus sp. AR9 [TaxId: 301298]}

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase)
domain: D-hydantoinase
species: Bacillus sp. AR9 [TaxId: 301298]

Probab=84.34  E-value=0.14  Score=39.01  Aligned_cols=16  Identities=0%  Similarity=-0.230  Sum_probs=13.9

Q ss_pred             eEEecCccccceecCC
Q 019093            2 ELTLTQPDDWHLHLRD   17 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~   17 (346)
                      ++|+||+||.|+|+..
T Consensus        47 ~~v~Pg~i~~~~~~~i   62 (127)
T d1ynya1          47 CYVIPIAVGSDADIVI   62 (127)
T ss_dssp             SEEEECSTTSBCCEEE
T ss_pred             ceeecccccccchhhh
Confidence            4799999999999853

>d1nfga1 b.92.1.3 (A:1-51,A:382-457) D-hydantoinase {Burkholderia pickettii [TaxId: 329]}

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase)
domain: D-hydantoinase
species: Burkholderia pickettii [TaxId: 329]

Probab=82.90  E-value=0.17  Score=38.61  Aligned_cols=16  Identities=0%  Similarity=-0.180  Sum_probs=13.8

Q ss_pred             eEEecCccccceecCC
Q 019093            2 ELTLTQPDDWHLHLRD   17 (346)
Q Consensus         2 ~~vlPG~ID~HvH~r~   17 (346)
                      ++|+||+||.|+|+..
T Consensus        47 ~~v~Pg~i~~~~~~~i   62 (127)
T d1nfga1          47 RYVFPIAVGSDADIVL   62 (127)
T ss_dssp             CEEEECSTTSBCCEEE
T ss_pred             eEEeeeccccccccee
Confidence            5899999999999854

>d2fvka1 b.92.1.3 (A:2-56,A:441-541) Dihydropyrimidine amidohydrolase Pyd2 {Yeast (Saccharomyces kluyveri) [TaxId: 4934]}

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase)
domain: Dihydropyrimidine amidohydrolase Pyd2
species: Yeast (Saccharomyces kluyveri) [TaxId: 4934]

Probab=80.39  E-value=0.56  Score=36.52  Aligned_cols=14  Identities=21%  Similarity=0.076  Sum_probs=12.4

Q ss_pred             EecCccccceecCC
Q 019093            4 TLTQPDDWHLHLRD   17 (346)
Q Consensus         4 vlPG~ID~HvH~r~   17 (346)
                      ++||+||+|+|+.+
T Consensus        56 ~~pg~~d~Hih~~~   69 (156)
T d2fvka1          56 ILPGVSDADLVIWY   69 (156)
T ss_dssp             CCTTTSBCCEEEEC
T ss_pred             ecccccccceEEEe
Confidence            48999999999876