Citrus Sinensis ID: 019247

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340----
Protein Sequence
MNLMNAIISCWSGRSQMALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLPIPALENGNYDVQYQRLDDENMASRGKESFY
Secondary Structure (PSIPRED)
cccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHcccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHEEEccccccccccccccccHHHHcccccccccccccccccc
Coil and Loop (DISEMBL)
MNLMNAIISCWSGRSQMALRTLYLLLLGQLVSFSLALSSFTTAVITdlgvdapiTQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVqgnflfnkafqftsissvtlldccaipcaiVFTWVFLGTRYSVWQLFGASLCVLGLGLMllsdaemaggggsrplLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSttakdllpipalengnydvqyqrlddenmasrgkesfy
Flexible Loop (DISEMBL)
MNLMNAIISCWSGRSQMALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLPIPALENGNYDVQYQRLDDenmasrgkesfy
Low Complexity Region (SEG)
MNLMNAIISCWSGRSQMAlrtlyllllgqlvsfslalSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASlcvlglglmllSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLPIPALENGNYDVQYQRLDDENMASRGKESFY
Disordered region (IsUnstruct)
***MNAIISCWSGRSQMALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLPIPALENGNYDVQY*****************
Disordered Region (DISOPRED)
************GRSQMALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYS**************************************
Disordered Region (DISEMBL)
MNLMNAIISCWSGRSQMALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLPIPALENGNYDVQYQRLDDENM*********
Disordered Region (DISPRO)
*NLMNAIISCWSGRSQMALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA***********************************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNLMNAIISCWSGRSQMALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLPIPALENGNYDVQYQRLDDENMASRGKESFY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	344	2.2.26 [Sep-21-2011]
Q5T1Q4	408	Solute carrier family 35	yes	no	0.843	0.710	0.354	4e-47
Q8BGK5	408	Solute carrier family 35	yes	no	0.843	0.710	0.357	2e-46
Q8IXU6	374	Solute carrier family 35	no	no	0.822	0.756	0.345	1e-44
Q7TML3	375	Solute carrier family 35	no	no	0.843	0.773	0.337	6e-44
Q0V9U2	391	Solute carrier family 35	yes	no	0.819	0.721	0.345	2e-42
O59785	505	Uncharacterized solute ca	yes	no	0.845	0.576	0.275	6e-29

>sp|Q5T1Q4|S35F1_HUMAN Solute carrier family 35 member F1 OS=Homo sapiens GN=SLC35F1 PE=2 SV=2

 Score =  189 bits (479), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 106/299 (35%), Positives = 178/299 (59%), Gaps = 9/299 (3%)

Query: 27  LGQLVSFSLALSSFTTAVIT-DLGVDAPITQSVLCYLSLALAYGGILLYRRQR------L 79
           LGQ++S  +     T+  ++ D   + P+ QS L Y+ L L Y   L  R+        L
Sbjct: 66  LGQVLSLLICGIGLTSKYLSEDFHANTPVFQSFLNYILLFLVYTTTLAVRQGEENLLAIL 125

Query: 80  QVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQ 139
           +  W+ Y++LG +D++ N+L  KA+Q+T+++S+ LLDC  IP  I+ +W FL  RY    
Sbjct: 126 RRRWWKYMILGLIDLEANYLVVKAYQYTTLTSIQLLDCFVIPVVILLSWFFLLIRYKAVH 185

Query: 140 LFGASLCVLGLGLMLLSDAEMA--GGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKID 197
             G  +C+LG+G M+ +D  +    G G   L+GD+LV+ GA  + +S V EE++++ + 
Sbjct: 186 FIGIVVCILGMGCMVGADVLVGRHQGAGENKLVGDLLVLGGATLYGISNVWEEYIIRTLS 245

Query: 198 RVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLK 257
           RVE + MIG++G   S +QL+ +E K L  V W   I L +VG +A  F  Y+ +P V+K
Sbjct: 246 RVEFLGMIGLFGAFFSGIQLAIMEHKELLKVPWDWQIGLLYVGFSACMFGLYSFMPVVIK 305

Query: 258 LSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLPIP 316
            + AT + LS+LT+D++++   +F +H + +  Y L+F  +LIGL++YS+T+  +   P
Sbjct: 306 KTSATSVNLSLLTADLYSLFCGLFLFHYKFSGLYLLSFFTILIGLVLYSSTSTYIAQDP 364

Putative solute transporter.
Homo sapiens (taxid: 9606)

>sp|Q8BGK5|S35F1_MOUSE Solute carrier family 35 member F1 OS=Mus musculus GN=Slc35f1 PE=2 SV=1

 Score =  186 bits (472), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 107/299 (35%), Positives = 176/299 (58%), Gaps = 9/299 (3%)

Query: 27  LGQLVSFSLALSSFTTAVIT-DLGVDAPITQSVLCYLSLALAYGGILLYRRQR------L 79
           LGQ++S  +     T+  +  D   + P+ QS L Y+ L L Y   L  R+        L
Sbjct: 66  LGQVLSLLVCGIGLTSKYLAEDFHANTPVFQSFLNYILLFLVYTTTLAVRQGEENLLAIL 125

Query: 80  QVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQ 139
           +  W+ Y++LG +D++ N+L  KA+Q+T+++SV LLDC  IP  I+ +W FL  RY    
Sbjct: 126 RRRWWKYMILGLIDLEANYLVVKAYQYTTLTSVQLLDCFVIPVVILLSWFFLLIRYKAVH 185

Query: 140 LFGASLCVLGLGLMLLSDAEMA--GGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKID 197
             G  +C+LG+G M+ +D  +    G G   L+GD+LV+ GA  + +S V EE +++ + 
Sbjct: 186 FIGIVVCILGMGCMVGADVLVGRHQGAGENKLVGDLLVLGGATLYGISNVWEESIIRTLS 245

Query: 198 RVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLK 257
           RVE + MIG++G   S +QL+ +E K L  V W   I L +VG +A  F  Y+ +P V+K
Sbjct: 246 RVEFLGMIGLFGAFFSGIQLAIMEHKELLKVPWDWQIGLLYVGFSACMFGLYSFMPVVIK 305

Query: 258 LSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLPIP 316
            + AT + LS+LT+D++++   +F +H + +  Y L+F  +LIGL++YS+T+  +   P
Sbjct: 306 KTSATSVNLSLLTADLYSLFCGLFLFHYKFSGLYLLSFFTILIGLVLYSSTSTYIAQDP 364

Putative solute transporter.

Mus musculus (taxid: 10090)

>sp|Q8IXU6|S35F2_HUMAN Solute carrier family 35 member F2 OS=Homo sapiens GN=SLC35F2 PE=1 SV=1

 Score =  180 bits (456), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 101/292 (34%), Positives = 174/292 (59%), Gaps = 9/292 (3%)

Query: 27  LGQLVSFSLALSSFTTAVITD-LGVDAPITQSVLCYLSLALAYGGILLYRRQR------L 79
           LGQ++S  +  ++ T+  + +   V+ P+ QS + Y  L L Y  +L +R         L
Sbjct: 45  LGQMLSLCICGTAITSQYLAERYKVNTPMLQSFINYCLLFLIYTVMLAFRSGSDNLLVIL 104

Query: 80  QVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQ 139
           +  W+ Y+LLG  DV+ N++  +A+Q+T+++SV LLDC  IP  +  +W  L  RY V  
Sbjct: 105 KRKWWKYILLGLADVEANYVIVRAYQYTTLTSVQLLDCFGIPVLMALSWFILHARYRVIH 164

Query: 140 LFGASLCVLGLGLMLLSD--AEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKID 197
               ++C+LG+G M+ +D  A      GS  L+GDILV+ GA  +A+S V EE++VKK+ 
Sbjct: 165 FIAVAVCLLGVGTMVGADILAGREDNSGSDVLIGDILVLLGASLYAISNVCEEYIVKKLS 224

Query: 198 RVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLK 257
           R E + M+G++G ++S +QL  +E K + S+ W   I L FV  A   F  Y+ +P V+K
Sbjct: 225 RQEFLGMVGLFGTIISGIQLLIVEYKDIASIHWDWKIALLFVAFALCMFCLYSFMPLVIK 284

Query: 258 LSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA 309
           ++ AT + L +LT+D++++ + +F +  + +  Y L+F  +++G I+Y +T 
Sbjct: 285 VTSATSVNLGILTADLYSLFVGLFLFGYKFSGLYILSFTVIMVGFILYCSTP 336

Putative solute transporter.

Homo sapiens (taxid: 9606)

>sp|Q7TML3|S35F2_MOUSE Solute carrier family 35 member F2 OS=Mus musculus GN=Slc35f2 PE=2 SV=2

 Score =  178 bits (451), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 101/299 (33%), Positives = 174/299 (58%), Gaps = 9/299 (3%)

Query: 27  LGQLVSFSLALSSFTTAVITD-LGVDAPITQSVLCYLSLALAYGGILLYRR------QRL 79
           LGQ++S  +  ++ T+  + +   V+ P+ QS + Y  L L Y  +L ++       + L
Sbjct: 45  LGQMLSLCICGTAITSQYLAEKYRVNTPMLQSFINYCLLFLVYTLMLAFQSGSDNLLEIL 104

Query: 80  QVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQ 139
           +  W+ Y LLG  DV+ N+L  +A+Q+T+++SV LLDC  IP  +  +W  L  RY V  
Sbjct: 105 RRKWWKYTLLGLADVEANYLIVRAYQYTTLTSVQLLDCFGIPVLMALSWFILRARYKVIH 164

Query: 140 LFGASLCVLGLGLMLLSD--AEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKID 197
                +C+LG+G M+ +D  A      GS  L+GDILV+ GA  +A+S V EE++VKK+ 
Sbjct: 165 FIAVFVCLLGVGTMVGADILAGREDNSGSDVLIGDILVLLGASLYAVSNVCEEYIVKKLS 224

Query: 198 RVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLK 257
           R E + M+G++G ++S +QL  +E K +  ++W   I L FV  A   F  Y+ +P V+K
Sbjct: 225 RQEFLGMVGLFGTIISGIQLLIVEYKDIARIQWDWKIALLFVAFALCMFCLYSFMPLVIK 284

Query: 258 LSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLPIP 316
           ++ AT + L +LT+D++++   +F +  + +  Y L+F  +++G I+Y +T    +  P
Sbjct: 285 VTSATSVNLGILTADLYSLFFGLFLFEYKFSGLYILSFTVIMVGFILYCSTPTRTVEPP 343

Putative solute transporter.

Mus musculus (taxid: 10090)

>sp|Q0V9U2|S35F2_XENTR Solute carrier family 35 member F2 OS=Xenopus tropicalis GN=slc35f2 PE=2 SV=2

 Score =  173 bits (438), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 102/295 (34%), Positives = 165/295 (55%), Gaps = 13/295 (4%)

Query: 27  LGQLVSFSLALSSFTTAVIT-DLGVDAPITQSVLCYLSLALAYGGILLYRRQR------L 79
           LGQ++S  +     T+  ++ D   + P+ QS L Y+ L L Y   L  R+        L
Sbjct: 45  LGQVLSLLICGIRLTSKYLSEDFHANTPLFQSFLNYILLFLVYTTTLAVRQGEENLLAIL 104

Query: 80  QVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQ 139
           +  W+ Y+ LG +D++  +L  KA Q+T+  S+ LL+C  IP  I+ +W FL  RY V  
Sbjct: 105 KRRWWKYMFLGIIDIEATYLVVKAHQYTTFISIQLLNCFVIPVVILLSWFFLLVRYKVLH 164

Query: 140 LFGASLCVLGLGLMLLSDAEMAGG------GGSRPLLGDILVIAGAIFFAMSYVGEEFLV 193
             GA  C+LG+G M  +D  M          G   L+GD+LV+ GA  + +S V +E++V
Sbjct: 165 FIGAIACILGIGCMAGADVLMGRQQKGDFYPGDSKLIGDVLVLGGATLYGISSVCQEYIV 224

Query: 194 KKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVP 253
           + + RVE++ MIG++G   S +QL+ +E K L  V W   I L +VG  A  F  Y+ +P
Sbjct: 225 RNLSRVELLGMIGLFGSFFSGIQLAIMEHKELLKVPWDWQIGLLYVGFTACMFGLYSFMP 284

Query: 254 FVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTT 308
            V+K + AT + LS+LT++++     +F +H + +  Y L+F  +L+GL+ Y +T
Sbjct: 285 VVIKKTSATAINLSMLTAELYTFFCGLFLFHYKFSGLYLLSFFTILLGLVFYFST 339

Putative solute transporter.

Xenopus tropicalis (taxid: 8364)

>sp|O59785|YCN8_SCHPO Uncharacterized solute carrier family 35 member C320.08 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC320.08 PE=1 SV=1

 Score =  128 bits (321), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 158/308 (51%), Gaps = 17/308 (5%)

Query: 14  RSQMALRTLYLLL---------LGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSL 64
            S    + LY LL         LGQ++S  +  ++     ++ +  + P  Q+ L Y  L
Sbjct: 125 ESTPKAKPLYFLLDKRFWIVFFLGQVLSLCITATNTFNGYMSGIS-NIPAFQTFLVYALL 183

Query: 65  ALAYGGILLYR---RQRLQV---SWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCC 118
            L Y    ++R   ++  ++     + Y++  F DV+GN+    A+Q+T++ S +LLD  
Sbjct: 184 TLVYTPYTVFRMGFKKYFEMIFRHGWKYIIFAFFDVEGNYFVVLAYQYTNMLSASLLDSW 243

Query: 119 AIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGG-GGSRPLLGDILVIA 177
           A    ++ +++FL  RY   Q+ G   C+ GL L+++SD    G      P LGD  +I 
Sbjct: 244 ATVAVVILSFIFLKVRYHWSQILGVVACIGGLVLLVVSDVISRGDYSAVNPGLGDGYMII 303

Query: 178 GAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILS 237
           GA  + +S   EE+   K+    V+  + +YG ++S++Q    +   L ++ W++++   
Sbjct: 304 GATCYGVSNTLEEYFASKLPLYVVIGQLSLYGSIISIIQTFIFDRHHLYTLHWTSEMGGY 363

Query: 238 FVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAA 297
             G     F+ Y+L P + ++S AT   +S+LTSD W++++ I  +   V W Y +AF  
Sbjct: 364 LAGFILVMFLLYSLAPILFRMSSATFYNISLLTSDFWSLVIGIHVFGYHVYWLYPIAFVL 423

Query: 298 VLIGLIIY 305
           +++GL +Y
Sbjct: 424 IILGLFVY 431

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	344
297740093	337	unnamed protein product [Vitis vinifera]	0.968	0.988	0.666	1e-129
359481996	352	PREDICTED: solute carrier family 35 memb	0.968	0.946	0.659	1e-127
359481998	673	PREDICTED: solute carrier family 35 memb	0.895	0.457	0.656	1e-122
297740094	337	unnamed protein product [Vitis vinifera]	0.962	0.982	0.658	1e-122
255575633	340	conserved hypothetical protein [Ricinus	0.947	0.958	0.681	1e-107
357511003	363	Solute carrier family 35 member F1 [Medi	0.909	0.862	0.593	1e-101
357511005	349	Solute carrier family 35 member F2 [Medi	0.906	0.893	0.583	5e-96
224134462	267	predicted protein [Populus trichocarpa]	0.755	0.973	0.697	3e-93
297740095	356	unnamed protein product [Vitis vinifera]	0.851	0.823	0.614	5e-91
242088093	347	hypothetical protein SORBIDRAFT_09g02187	0.883	0.876	0.553	4e-87

>gi|297740093|emb|CBI30275.3| unnamed protein product [Vitis vinifera]

 Score =  467 bits (1201), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 222/333 (66%), Positives = 279/333 (83%)

Query: 8   ISCWSGRSQMALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALA 67
           +S W     + LRTLY+L LGQ+VSF LA++SF+++ I DLGVDAP+TQS   YLSLAL 
Sbjct: 1   MSSWWRSHGILLRTLYVLFLGQVVSFVLAVASFSSSFIADLGVDAPLTQSFFTYLSLALV 60

Query: 68  YGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFT 127
           YG ILLYRRQ+L++SWYWYL LGFVDVQGN+L NKA+Q++SI+SVTLLDC  IP  I+ T
Sbjct: 61  YGSILLYRRQKLRISWYWYLFLGFVDVQGNYLVNKAYQYSSITSVTLLDCWTIPWVIILT 120

Query: 128 WVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYV 187
           W+FLGTRYS+WQ FGA+LC++GLGL+LLSDA + GG GSRPLLGDILVIAG +FFA+S V
Sbjct: 121 WIFLGTRYSLWQFFGAALCIVGLGLVLLSDAGVGGGDGSRPLLGDILVIAGTLFFALSNV 180

Query: 188 GEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFM 247
           GEEF VKK DRVEVV MIG++GLLVSV ++S +ELKSLESV+WSTDIIL FVG A S+F+
Sbjct: 181 GEEFCVKKKDRVEVVTMIGIFGLLVSVCEISIMELKSLESVEWSTDIILGFVGYAVSTFL 240

Query: 248 FYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYST 307
           FYT+VPF+L++SGAT   LS+LTSDMWAV++RIF YHQ+V+W YY++FA V +GL+IYS 
Sbjct: 241 FYTIVPFLLQISGATWFNLSLLTSDMWAVVIRIFFYHQKVDWLYYISFAMVAVGLVIYSK 300

Query: 308 TAKDLLPIPALENGNYDVQYQRLDDENMASRGK 340
           T KD +P+P L +GN++ +YQ LD+EN  SR +
Sbjct: 301 TEKDPIPLPTLGDGNHNAEYQVLDEENTESRNE 333

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359481996|ref|XP_002276979.2| PREDICTED: solute carrier family 35 member F1-like [Vitis vinifera]

 Score =  459 bits (1181), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 221/335 (65%), Positives = 278/335 (82%), Gaps = 2/335 (0%)

Query: 6   AIISCWSGRSQMALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLA 65
           A +  W     + LRTLY+L LGQ+VSF LA++SF+++ I DLGVDAP+TQS   YLSLA
Sbjct: 16  ADLDAWWRSHGILLRTLYVLFLGQVVSFVLAVASFSSSFIADLGVDAPLTQSFFTYLSLA 75

Query: 66  LAYGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIV 125
           L YG ILLYRRQ+L++SWYWYL LGFVDVQGN+L NKA+Q++SI+SVTLLDC  IP  I+
Sbjct: 76  LVYGSILLYRRQKLRISWYWYLFLGFVDVQGNYLVNKAYQYSSITSVTLLDCWTIPWVII 135

Query: 126 FTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMS 185
            TW+FLGTRYS+WQ FGA+LC++GLGL+LLSDA +  G GSRPLLGDILVIAG +FFA+S
Sbjct: 136 LTWIFLGTRYSLWQFFGAALCIVGLGLVLLSDAGV--GDGSRPLLGDILVIAGTLFFALS 193

Query: 186 YVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASS 245
            VGEEF VKK DRVEVV MIG++GLLVSV ++S +ELKSLESV+WSTDIIL FVG A S+
Sbjct: 194 NVGEEFCVKKKDRVEVVTMIGIFGLLVSVCEISIMELKSLESVEWSTDIILGFVGYAVST 253

Query: 246 FMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIY 305
           F+FYT+VPF+L++SGAT   LS+LTSDMWAV++RIF YHQ+V+W YY++FA V +GL+IY
Sbjct: 254 FLFYTIVPFLLQISGATWFNLSLLTSDMWAVVIRIFFYHQKVDWLYYISFAMVAVGLVIY 313

Query: 306 STTAKDLLPIPALENGNYDVQYQRLDDENMASRGK 340
           S T KD +P+P L +GN++ +YQ LD+EN  SR +
Sbjct: 314 SKTEKDPIPLPTLGDGNHNAEYQVLDEENTESRNE 348

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359481998|ref|XP_003632702.1| PREDICTED: solute carrier family 35 member F1-like [Vitis vinifera]

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 218/332 (65%), Positives = 270/332 (81%)

Query: 8   ISCWSGRSQMALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALA 67
           ++ W   ++ +LRTL++LLLGQ+VSF LA+S FT++ I DLGVDAP+TQS   YL LAL 
Sbjct: 337 MNSWWRCNEASLRTLHVLLLGQVVSFVLAVSGFTSSFIADLGVDAPLTQSFFTYLCLALV 396

Query: 68  YGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFT 127
            G ILLYRRQRLQVSWYWYL LGF+DVQGN+L NKAFQ++S++SV LLDC  IP  I+ T
Sbjct: 397 NGSILLYRRQRLQVSWYWYLFLGFIDVQGNYLVNKAFQYSSLTSVALLDCWTIPWVIILT 456

Query: 128 WVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYV 187
           W+FLGTRYS+WQ FGA+LCV GLGL+LLSDA + G GGSRPLLGD LVIAG +  AMS V
Sbjct: 457 WIFLGTRYSIWQFFGAALCVAGLGLVLLSDAGVGGEGGSRPLLGDTLVIAGTLCIAMSNV 516

Query: 188 GEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFM 247
           GEEF VKK DRVE++ M+G++GLLVSV ++S +ELKSLES++WST I+L+FVG A S+F+
Sbjct: 517 GEEFCVKKKDRVELMSMLGLFGLLVSVCEISIVELKSLESIEWSTKIVLAFVGFALSNFL 576

Query: 248 FYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYST 307
           FYTLVPF+LK+SGATM  LS LTSDMWAV++RIF Y Q+V+W YYL+FA V IG+IIYST
Sbjct: 577 FYTLVPFLLKISGATMFNLSALTSDMWAVVIRIFFYRQKVDWLYYLSFAVVAIGIIIYST 636

Query: 308 TAKDLLPIPALENGNYDVQYQRLDDENMASRG 339
           T KD +P P+ E+GN   QYQ L+ E+  SR 
Sbjct: 637 TEKDPIPSPSPEDGNLSAQYQVLNGESTESRN 668

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740094|emb|CBI30276.3| unnamed protein product [Vitis vinifera]

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 218/331 (65%), Positives = 270/331 (81%)

Query: 8   ISCWSGRSQMALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALA 67
           ++ W   ++ +LRTL++LLLGQ+VSF LA+S FT++ I DLGVDAP+TQS   YL LAL 
Sbjct: 1   MNSWWRCNEASLRTLHVLLLGQVVSFVLAVSGFTSSFIADLGVDAPLTQSFFTYLCLALV 60

Query: 68  YGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFT 127
            G ILLYRRQRLQVSWYWYL LGF+DVQGN+L NKAFQ++S++SV LLDC  IP  I+ T
Sbjct: 61  NGSILLYRRQRLQVSWYWYLFLGFIDVQGNYLVNKAFQYSSLTSVALLDCWTIPWVIILT 120

Query: 128 WVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYV 187
           W+FLGTRYS+WQ FGA+LCV GLGL+LLSDA + G GGSRPLLGD LVIAG +  AMS V
Sbjct: 121 WIFLGTRYSIWQFFGAALCVAGLGLVLLSDAGVGGEGGSRPLLGDTLVIAGTLCIAMSNV 180

Query: 188 GEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFM 247
           GEEF VKK DRVE++ M+G++GLLVSV ++S +ELKSLES++WST I+L+FVG A S+F+
Sbjct: 181 GEEFCVKKKDRVELMSMLGLFGLLVSVCEISIVELKSLESIEWSTKIVLAFVGFALSNFL 240

Query: 248 FYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYST 307
           FYTLVPF+LK+SGATM  LS LTSDMWAV++RIF Y Q+V+W YYL+FA V IG+IIYST
Sbjct: 241 FYTLVPFLLKISGATMFNLSALTSDMWAVVIRIFFYRQKVDWLYYLSFAVVAIGIIIYST 300

Query: 308 TAKDLLPIPALENGNYDVQYQRLDDENMASR 338
           T KD +P P+ E+GN   QYQ L+ E+  SR
Sbjct: 301 TEKDPIPSPSPEDGNLSAQYQVLNGESTESR 331

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255575633|ref|XP_002528716.1| conserved hypothetical protein [Ricinus communis] gi|223531810|gb|EEF33628.1| conserved hypothetical protein [Ricinus communis]

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 223/327 (68%), Positives = 266/327 (81%), Gaps = 1/327 (0%)

Query: 9   SCWSGRSQMALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAY 68
           SC   +S   L+ LYLLLLGQ+VSF LA+ S T++++ DLG+DAPITQS   Y +LAL +
Sbjct: 8   SCRWWKSHATLKILYLLLLGQVVSFILAVCSLTSSLVVDLGIDAPITQSSFNYFALALVF 67

Query: 69  GGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTW 128
           G ILLYRRQ+L+VSWYWYLLLGFVDVQGN+L N+A+Q+TSI+SVTLLDC  I  AIV TW
Sbjct: 68  GSILLYRRQKLRVSWYWYLLLGFVDVQGNYLVNRAYQYTSITSVTLLDCWTIVWAIVLTW 127

Query: 129 VFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVG 188
            FLGTRYS+WQLFGA+LCVLGLGL+LLSDA + GGGGSRPLLGD+LVIAG IFFA+S VG
Sbjct: 128 FFLGTRYSIWQLFGAALCVLGLGLVLLSDAGVGGGGGSRPLLGDLLVIAGTIFFALSNVG 187

Query: 189 EEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMF 248
           EEF VK  DRVEVV M+G++GLLVSVVQLS LELK+L+S+ W+ DIIL+  G   S FMF
Sbjct: 188 EEFFVKNKDRVEVVAMLGIFGLLVSVVQLSVLELKTLKSINWTADIILAIAGYTLSMFMF 247

Query: 249 YTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTT 308
           YTL PFVLKL GATM  LS+LTSDMWAV+ RI  YHQ+V+W Y+L+ A V +GLIIYSTT
Sbjct: 248 YTLTPFVLKLGGATMFNLSMLTSDMWAVVFRICFYHQEVDWLYFLSLAVVTVGLIIYSTT 307

Query: 309 AKD-LLPIPALENGNYDVQYQRLDDEN 334
            K+   PIPALE GN + +YQ L+D N
Sbjct: 308 DKESSAPIPALEEGNSNGEYQVLNDGN 334

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357511003|ref|XP_003625790.1| Solute carrier family 35 member F1 [Medicago truncatula] gi|355500805|gb|AES82008.1| Solute carrier family 35 member F1 [Medicago truncatula]

 Score =  374 bits (959), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 194/327 (59%), Positives = 246/327 (75%), Gaps = 14/327 (4%)

Query: 31  VSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLG 90
           VSF LAL S T+++I   GVDAP+TQS+  Y SLAL YG ILLYR Q+  VSWYWYLLLG
Sbjct: 28  VSFLLALMSITSSLIAQFGVDAPLTQSLFTYGSLALVYGSILLYRHQKPLVSWYWYLLLG 87

Query: 91  FVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGL 150
           F D QG +L  KA+Q+TS++SVTLLDC  +P AI+ TW+FLGTRYS+WQL G +LCVLGL
Sbjct: 88  FADAQGCYLVIKAYQYTSVTSVTLLDCWTVPWAILLTWIFLGTRYSLWQLCGGTLCVLGL 147

Query: 151 GLMLLSDA---EMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGV 207
            L+L SD       GGGGS+P+LGD+LVI G +F+A+S V EEF VKK DRVE V M+GV
Sbjct: 148 SLVLFSDTWDGGGGGGGGSKPVLGDVLVIVGTVFYAISNVVEEFCVKKKDRVETVTMLGV 207

Query: 208 YGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILS 267
           YG LV+ +++S LELK+L+S+KWS+DI+L+F G   SSFMFY+L PFVLKLSG+TM  LS
Sbjct: 208 YGFLVTAIEVSVLELKTLKSIKWSSDIVLAFAGYGVSSFMFYSLAPFVLKLSGSTMFNLS 267

Query: 268 VLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLPIPA-LENGNYDVQ 326
           +LTSD+WAV+ R+F YHQ+V+W Y+++F  V IGLIIYSTT K L+P  A  E+ N + +
Sbjct: 268 LLTSDIWAVVFRVFIYHQKVDWLYFVSFLVVAIGLIIYSTTEKKLVPASATTEDENLNTE 327

Query: 327 YQRLDDEN----------MASRGKESF 343
           YQ L+ EN          +ASRGK  +
Sbjct: 328 YQILNGENESSTFAQNDSLASRGKPHW 354

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357511005|ref|XP_003625791.1| Solute carrier family 35 member F2 [Medicago truncatula] gi|355500806|gb|AES82009.1| Solute carrier family 35 member F2 [Medicago truncatula]

 Score =  357 bits (915), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 185/317 (58%), Positives = 238/317 (75%), Gaps = 5/317 (1%)

Query: 31  VSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLG 90
           VSF LAL S T+++I   GVDAP+TQS+  Y SLAL YG ILLYR Q+  VSWYWYLLLG
Sbjct: 28  VSFLLALMSITSSLIAQFGVDAPLTQSLFTYGSLALVYGSILLYRHQKPLVSWYWYLLLG 87

Query: 91  FVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGL 150
           F D QG +L  KA+Q+TS++SVTLLDC  +P AI+ TW+FLGTRYS+WQL G +LCVLGL
Sbjct: 88  FADAQGCYLVIKAYQYTSVTSVTLLDCWTVPWAILLTWIFLGTRYSLWQLCGGTLCVLGL 147

Query: 151 GLMLLSDA----EMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIG 206
            L+L SD        GGGGS+P+LGD+LVI G +FFA+S V EEF VKK DRVE V M+G
Sbjct: 148 SLVLFSDTWDGGGGGGGGGSKPILGDVLVIVGTVFFAVSNVVEEFCVKKKDRVEAVTMLG 207

Query: 207 VYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLIL 266
           VYG LV+ +++S LELK+L+S+KWS DI+L+F G   SSF++ +L PFVLK  G+ M  L
Sbjct: 208 VYGFLVTAIEVSVLELKTLKSIKWSGDIVLAFAGYGVSSFIYCSLAPFVLKFGGSAMFNL 267

Query: 267 SVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLPIPA-LENGNYDV 325
           S+LTSDMWAV+ R+F YHQ+V+W Y+++F  V IGLIIYSTT K L+P  A  E+ N + 
Sbjct: 268 SLLTSDMWAVLFRVFIYHQKVDWLYFVSFLVVGIGLIIYSTTEKKLVPASATTEDENLNT 327

Query: 326 QYQRLDDENMASRGKES 342
           +YQ L+ E+ ++   +S
Sbjct: 328 EYQILNGESESTTLDQS 344

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224134462|ref|XP_002327411.1| predicted protein [Populus trichocarpa] gi|222835965|gb|EEE74386.1| predicted protein [Populus trichocarpa]

 Score =  348 bits (892), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 182/261 (69%), Positives = 213/261 (81%), Gaps = 1/261 (0%)

Query: 49  GVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTS 108
           GVDAP+TQS   YL+LAL YG ILLYRRQ+LQVSWYWYLLLGFVDVQGN+L NKA+QF+S
Sbjct: 1   GVDAPLTQSSFNYLALALIYGSILLYRRQKLQVSWYWYLLLGFVDVQGNYLVNKAYQFSS 60

Query: 109 ISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAG-GGGSR 167
           I+SVTLLDC  +   I  TW FLGTRY++WQL GA++CVLGLGL+LLSDA +A   GGS+
Sbjct: 61  ITSVTLLDCWTVAWVIALTWFFLGTRYTLWQLLGAAVCVLGLGLVLLSDAGVAHITGGSK 120

Query: 168 PLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLES 227
           P+LGD LVI G IFFA+S VGEEF VKK  RVEVV MIGVYG LVS V+LS +ELKSLE+
Sbjct: 121 PVLGDFLVITGTIFFALSNVGEEFCVKKKGRVEVVTMIGVYGFLVSAVELSIVELKSLEA 180

Query: 228 VKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQV 287
           V WS DI+ +  G   S F+FY+L PFVLKLSGATM  LS+LT+DMWAV+ R+F YHQQV
Sbjct: 181 VAWSKDIVFAIAGYTLSMFLFYSLAPFVLKLSGATMFNLSILTADMWAVVFRVFFYHQQV 240

Query: 288 NWTYYLAFAAVLIGLIIYSTT 308
           +W Y+L+FA V IGLIIYS T
Sbjct: 241 DWLYFLSFAIVAIGLIIYSLT 261

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740095|emb|CBI30277.3| unnamed protein product [Vitis vinifera]

 Score =  340 bits (872), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 180/293 (61%), Positives = 228/293 (77%)

Query: 14  RSQMALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILL 73
           R++  LR  Y L LGQ+VSF +A SSF T+ + DLGV+ P+TQS   YL L L +G I L
Sbjct: 28  RNERLLRNAYALFLGQVVSFLVAFSSFFTSSVIDLGVNVPLTQSFFAYLCLVLVFGTIRL 87

Query: 74  YRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGT 133
            RRQ ++VSW WYL LGFVDVQGN+L  KA+Q++S +SVTLLDC  IP A++FTW+ LGT
Sbjct: 88  GRRQNIRVSWIWYLFLGFVDVQGNYLVKKAYQYSSATSVTLLDCWTIPWAMIFTWIVLGT 147

Query: 134 RYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLV 193
           RYS+ Q FGA+LCV GL  + LSDA   GGGGS+P+LGD LV+AG +F AMS VGEEF V
Sbjct: 148 RYSIRQFFGAALCVAGLASVFLSDAGAGGGGGSKPILGDTLVVAGTLFLAMSNVGEEFCV 207

Query: 194 KKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVP 253
           KK D VEVV MIG +GLLVS  ++  +E ++L+S+KWS DIIL   G+  S+F+FYTLVP
Sbjct: 208 KKKDSVEVVAMIGAFGLLVSACEIYIMEFETLKSIKWSPDIILGLAGHVLSTFLFYTLVP 267

Query: 254 FVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYS 306
           F+LKLSGATML LS+LTSD+WAV++R++ YHQ+V+W YYL+FA + IGLIIYS
Sbjct: 268 FLLKLSGATMLSLSLLTSDLWAVVIRVYFYHQKVDWLYYLSFATITIGLIIYS 320

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242088093|ref|XP_002439879.1| hypothetical protein SORBIDRAFT_09g021870 [Sorghum bicolor] gi|241945164|gb|EES18309.1| hypothetical protein SORBIDRAFT_09g021870 [Sorghum bicolor]

 Score =  327 bits (839), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 172/311 (55%), Positives = 220/311 (70%), Gaps = 7/311 (2%)

Query: 32  SFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGF 91
           +F++A SSFT+++I +LGVDAP+TQS   YL L L Y  I+L RRQ+LQ++WYWYL L F
Sbjct: 21  AFAMAASSFTSSLIANLGVDAPLTQSFFAYLLLTLVYVPIVLRRRQKLQIAWYWYLALAF 80

Query: 92  VDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLG 151
            DVQGN+L  KA+Q++ I+SVTLLDC  +   I+ TW  LGTRYS+WQ  GA  CV GL 
Sbjct: 81  FDVQGNYLVVKAYQYSYITSVTLLDCWTVVWVIILTWYALGTRYSLWQFVGAGTCVAGLA 140

Query: 152 LMLLSDAEMAG--GGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYG 209
           L+LLSDAE       G  PLLGD+LVIAG + FA S VGEE+ VKK DRVEVV M+G++G
Sbjct: 141 LVLLSDAESPEEQDPGKMPLLGDVLVIAGTVGFAFSNVGEEYCVKKKDRVEVVAMLGLFG 200

Query: 210 LLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVL 269
           LL+S+VQ+   E K LE+V WS  +I  F G A + F+FYT+ PFVLK+SGAT+  LS+L
Sbjct: 201 LLISIVQILIFERKGLEAVTWSPTMISLFAGFAVAIFIFYTITPFVLKMSGATLFNLSLL 260

Query: 270 TSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYS--TTAKDLLPIPALENGNYDVQY 327
           TSDMWAV +R+  Y QQ+NW YYLAF  V IGLIIYS   ++ D     + E      QY
Sbjct: 261 TSDMWAVAIRVLFYQQQINWLYYLAFTVVAIGLIIYSLNDSSSDDETAGSTEA---PAQY 317

Query: 328 QRLDDENMASR 338
           Q+L  E+ ++R
Sbjct: 318 QQLPIEDNSTR 328

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	344
TAIR|locus:2081262	333	AT3G59340 "AT3G59340" [Arabido	0.796	0.822	0.469	5.6e-68
TAIR|locus:2081212	339	AT3G59320 "AT3G59320" [Arabido	0.761	0.772	0.490	3.1e-67
TAIR|locus:2081197	363	AT3G59310 "AT3G59310" [Arabido	0.595	0.564	0.430	5.4e-65
DICTYBASE|DDB_G0287003	417	DDB_G0287003 "solute carrier f	0.779	0.642	0.358	4.4e-45
UNIPROTKB|Q5T1Q4	408	SLC35F1 "Solute carrier family	0.761	0.642	0.352	5.7e-43
MGI|MGI:2139810	408	Slc35f1 "solute carrier family	0.761	0.642	0.356	1.5e-42
UNIPROTKB|Q8IXU6	374	SLC35F2 "Solute carrier family	0.75	0.689	0.343	2.8e-41
MGI|MGI:1919272	375	Slc35f2 "solute carrier family	0.75	0.688	0.339	1.2e-40
WB|WBGene00022270	429	Y73E7A.3 [Caenorhabditis elega	0.761	0.610	0.347	4.2e-40
ASPGD|ASPL0000029133	399	AN5236 [Emericella nidulans (t	0.776	0.669	0.269	6.9e-31

TAIR|locus:2081262 AT3G59340 "AT3G59340" [Arabidopsis thaliana (taxid:3702)]

 Score = 690 (248.0 bits), Expect = 5.6e-68, P = 5.6e-68
 Identities = 129/275 (46%), Positives = 185/275 (67%)

Query:    38 SSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGN 97
             ++FT++ +   G++AP +Q+ L Y  LA+ YGGI+LYRR  ++  WY Y LL  VDV+GN
Sbjct:    33 NAFTSSELARKGINAPTSQTFLSYTLLAVVYGGIMLYRRPTIKGKWYHYFLLALVDVEGN 92

Query:    98 FLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASXXXXXXXXXXXSD 157
             FL  KA Q+TSI+S+ LLDC AIPC +V TW+FL T+Y + ++ G             SD
Sbjct:    93 FLVVKANQYTSITSIMLLDCWAIPCVLVLTWMFLKTKYRLMKISGVFICIAGVVMVLFSD 152

Query:   158 AEMAG-GGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQ 216
                    GGS P+ GD LV+AGA  +A+S   EEFLVK  D VE++  +G++G ++S +Q
Sbjct:   153 VHAGSRAGGSNPVKGDFLVLAGATLYAVSNTTEEFLVKNADTVELMTFMGLFGAIISAIQ 212

Query:   217 LSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAV 276
             ++  E   L+++ WS D +  F+  A + F+FY+L+P +L+ +G+TM  LS+LTSDMWAV
Sbjct:   213 VAIFEQGELKAIHWSADAVFPFLRFAITMFLFYSLLPILLRTNGSTMFTLSLLTSDMWAV 272

Query:   277 ILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKD 311
             ++RIF YH++V+W YYLAFA   IGLIIYS   KD
Sbjct:   273 LIRIFAYHEKVDWLYYLAFATTAIGLIIYSMKEKD 307

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2081212 AT3G59320 "AT3G59320" [Arabidopsis thaliana (taxid:3702)]

 Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
 Identities = 130/265 (49%), Positives = 181/265 (68%)

Query:    49 GVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTS 108
             G+ AP +Q+ L Y+SLA+ YGGI+LYRR  ++V WY Y LL  VDV+ NFL  KAFQ TS
Sbjct:    42 GISAPTSQTFLGYVSLAIVYGGIMLYRRSAIKVKWYHYFLLAVVDVEANFLVVKAFQNTS 101

Query:   109 ISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASXXXXXXXXXXXSDAEMAG--GGGS 166
             ++S+ LLDC AIPC +V TWVFL TRY + ++ G             SD   AG   GGS
Sbjct:   102 MTSIMLLDCWAIPCVLVLTWVFLKTRYRLMKISGVVICIVGVVMVVFSDVH-AGDRAGGS 160

Query:   167 RPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLE 226
              P+ GD LVIAGA  +A+S V EEFLVK  D  E++  +G++G +++ +Q+S  E  ++ 
Sbjct:   161 NPVKGDFLVIAGATLYAVSNVTEEFLVKNADVTELMAFLGLFGAIIAAIQISIFERGAVR 220

Query:   227 SVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQ 286
             +++WST+ IL ++G A   F+FYTL+  ++K +G+TM  LS+LTSDMWA+++R F YH++
Sbjct:   221 AIQWSTEAILLYIGGALGLFLFYTLITILIKNNGSTMFNLSLLTSDMWAILIRTFGYHEK 280

Query:   287 VNWTYYLAFAAVLIGLIIYSTTAKD 311
             V+W Y+LAFA    GLIIYS   KD
Sbjct:   281 VDWLYFLAFATTATGLIIYSMKEKD 305

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2081197 AT3G59310 "AT3G59310" [Arabidopsis thaliana (taxid:3702)]

 Score = 457 (165.9 bits), Expect = 5.4e-65, Sum P(2) = 5.4e-65
 Identities = 90/209 (43%), Positives = 131/209 (62%)

Query:    38 SSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGN 97
             + FT++ +   G++ P +Q  L Y+ LA+ YG I+LYRR  ++  WY+Y LL FVDV+ N
Sbjct:    30 NGFTSSELARKGINVPTSQCFLNYVLLAIVYGSIMLYRRSDIKAKWYYYFLLAFVDVEAN 89

Query:    98 FLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASXXXXXXXXXXXSD 157
             FL  KA+Q+TS++SV LLDC AIPC +V TW +L T+Y + ++ G             SD
Sbjct:    90 FLVVKAYQYTSLTSVMLLDCWAIPCVLVLTWFYLKTKYRLMKISGVFICIVGVFMVVFSD 149

Query:   158 AEMAG--GGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVV 215
                AG   GGS P+ GD LV+AGA  +A+S   EEFLVK  D VE++  +G +G ++S +
Sbjct:   150 VH-AGDRAGGSNPVKGDFLVLAGATLYAVSNTSEEFLVKNADTVELMTFLGFFGAIISAI 208

Query:   216 QLSTLELKSLESVKWSTDIILSFVGNAAS 244
             Q+S LE   L+++ WST  +  F+  A S
Sbjct:   209 QVSILERDELKAIHWSTGAV-GFLAMAIS 236

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

DICTYBASE|DDB_G0287003 DDB_G0287003 "solute carrier family 35 member protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
 Identities = 99/276 (35%), Positives = 167/276 (60%)

Query:    40 FTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRR---QRLQVSWYWYLLLGFVDVQG 96
             F+  ++   GV+ P TQS+L Y+ L + Y  +L+ R    + ++    ++  L  VD++ 
Sbjct:    47 FSQLLVKKYGVNIPTTQSLLNYILLCV-YLLVLVKRGVLWETIKTKSIYFAPLALVDLEA 105

Query:    97 NFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASXXXXXXXXXXXS 156
             N++  KA+Q+T+I+SV LLDC  IPC +V + +FL TR++   +               S
Sbjct:   106 NYIVVKAYQYTTITSVMLLDCFTIPCVVVLSRIFLKTRFTFVHIIAVLIALAGMAILVVS 165

Query:   157 D---AEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVS 213
             D    E A GG S PLLGD L +A ++ +A+S VG+E  VKK DRV  + MIG+YG +  
Sbjct:   166 DIIEGESANGG-SNPLLGDFLCLASSVCYAISNVGQEATVKKYDRVTYLAMIGLYGSIFC 224

Query:   214 VVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDM 273
              +Q++ LE   L ++ WS  ++   VG A   F+ Y+  P +++++GAT++ LS+LTSDM
Sbjct:   225 GIQIAILERNELATMAWSGGVVGYIVGFALCLFIMYSFTPTMMEIAGATVMNLSLLTSDM 284

Query:   274 WAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA 309
             + +I+ IF + + ++W Y+L+F  ++  L+IY+ +A
Sbjct:   285 FGIIVAIFVFDRDLSWLYFLSFFVIVSALVIYNLSA 320

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

UNIPROTKB|Q5T1Q4 SLC35F1 "Solute carrier family 35 member F1" [Homo sapiens (taxid:9606)]

 Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
 Identities = 96/272 (35%), Positives = 157/272 (57%)

Query:    47 DLGVDAPITQSVLCYLSLALAYGGILLYRRQR------LQVSWYWYLLLGFVDVQGNFLF 100
             D   + P+ QS L Y+ L L Y   L  R+        L+  W+ Y++LG +D++ N+L 
Sbjct:    87 DFHANTPVFQSFLNYILLFLVYTTTLAVRQGEENLLAILRRRWWKYMILGLIDLEANYLV 146

Query:   101 NKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASXXXXXXXXXXXSDAEM 160
              KA+Q+T+++S+ LLDC  IP  I+ +W FL  RY      G             +D  +
Sbjct:   147 VKAYQYTTLTSIQLLDCFVIPVVILLSWFFLLIRYKAVHFIGIVVCILGMGCMVGADV-L 205

Query:   161 AG---GGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQL 217
              G   G G   L+GD+LV+ GA  + +S V EE++++ + RVE + MIG++G   S +QL
Sbjct:   206 VGRHQGAGENKLVGDLLVLGGATLYGISNVWEEYIIRTLSRVEFLGMIGLFGAFFSGIQL 265

Query:   218 STLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVI 277
             + +E K L  V W   I L +VG +A  F  Y+ +P V+K + AT + LS+LT+D++++ 
Sbjct:   266 AIMEHKELLKVPWDWQIGLLYVGFSACMFGLYSFMPVVIKKTSATSVNLSLLTADLYSLF 325

Query:   278 LRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA 309
               +F +H + +  Y L+F  +LIGL++YS+T+
Sbjct:   326 CGLFLFHYKFSGLYLLSFFTILIGLVLYSSTS 357

GO:0006810 "transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:2139810 Slc35f1 "solute carrier family 35, member F1" [Mus musculus (taxid:10090)]

 Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
 Identities = 97/272 (35%), Positives = 156/272 (57%)

Query:    47 DLGVDAPITQSVLCYLSLALAYGGILLYRRQR------LQVSWYWYLLLGFVDVQGNFLF 100
             D   + P+ QS L Y+ L L Y   L  R+        L+  W+ Y++LG +D++ N+L 
Sbjct:    87 DFHANTPVFQSFLNYILLFLVYTTTLAVRQGEENLLAILRRRWWKYMILGLIDLEANYLV 146

Query:   101 NKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASXXXXXXXXXXXSDAEM 160
              KA+Q+T+++SV LLDC  IP  I+ +W FL  RY      G             +D  +
Sbjct:   147 VKAYQYTTLTSVQLLDCFVIPVVILLSWFFLLIRYKAVHFIGIVVCILGMGCMVGADV-L 205

Query:   161 AG---GGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQL 217
              G   G G   L+GD+LV+ GA  + +S V EE +++ + RVE + MIG++G   S +QL
Sbjct:   206 VGRHQGAGENKLVGDLLVLGGATLYGISNVWEESIIRTLSRVEFLGMIGLFGAFFSGIQL 265

Query:   218 STLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVI 277
             + +E K L  V W   I L +VG +A  F  Y+ +P V+K + AT + LS+LT+D++++ 
Sbjct:   266 AIMEHKELLKVPWDWQIGLLYVGFSACMFGLYSFMPVVIKKTSATSVNLSLLTADLYSLF 325

Query:   278 LRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA 309
               +F +H + +  Y L+F  +LIGL++YS+T+
Sbjct:   326 CGLFLFHYKFSGLYLLSFFTILIGLVLYSSTS 357

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0006810 "transport" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q8IXU6 SLC35F2 "Solute carrier family 35 member F2" [Homo sapiens (taxid:9606)]

 Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
 Identities = 92/268 (34%), Positives = 154/268 (57%)

Query:    50 VDAPITQSVLCYLSLALAYGGILLYRRQR------LQVSWYWYLLLGFVDVQGNFLFNKA 103
             V+ P+ QS + Y  L L Y  +L +R         L+  W+ Y+LLG  DV+ N++  +A
Sbjct:    69 VNTPMLQSFINYCLLFLIYTVMLAFRSGSDNLLVILKRKWWKYILLGLADVEANYVIVRA 128

Query:   104 FQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASXXXXXXXXXXXSDAEMAG- 162
             +Q+T+++SV LLDC  IP  +  +W  L  RY V      +           +D  +AG 
Sbjct:   129 YQYTTLTSVQLLDCFGIPVLMALSWFILHARYRVIHFIAVAVCLLGVGTMVGADI-LAGR 187

Query:   163 --GGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTL 220
                 GS  L+GDILV+ GA  +A+S V EE++VKK+ R E + M+G++G ++S +QL  +
Sbjct:   188 EDNSGSDVLIGDILVLLGASLYAISNVCEEYIVKKLSRQEFLGMVGLFGTIISGIQLLIV 247

Query:   221 ELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRI 280
             E K + S+ W   I L FV  A   F  Y+ +P V+K++ AT + L +LT+D++++ + +
Sbjct:   248 EYKDIASIHWDWKIALLFVAFALCMFCLYSFMPLVIKVTSATSVNLGILTADLYSLFVGL 307

Query:   281 FCYHQQVNWTYYLAFAAVLIGLIIYSTT 308
             F +  + +  Y L+F  +++G I+Y +T
Sbjct:   308 FLFGYKFSGLYILSFTVIMVGFILYCST 335

GO:0006810 "transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

MGI|MGI:1919272 Slc35f2 "solute carrier family 35, member F2" [Mus musculus (taxid:10090)]

 Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
 Identities = 91/268 (33%), Positives = 152/268 (56%)

Query:    50 VDAPITQSVLCYLSLALAYGGILLYRR------QRLQVSWYWYLLLGFVDVQGNFLFNKA 103
             V+ P+ QS + Y  L L Y  +L ++       + L+  W+ Y LLG  DV+ N+L  +A
Sbjct:    69 VNTPMLQSFINYCLLFLVYTLMLAFQSGSDNLLEILRRKWWKYTLLGLADVEANYLIVRA 128

Query:   104 FQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASXXXXXXXXXXXSDAEMAG- 162
             +Q+T+++SV LLDC  IP  +  +W  L  RY V                  +D  +AG 
Sbjct:   129 YQYTTLTSVQLLDCFGIPVLMALSWFILRARYKVIHFIAVFVCLLGVGTMVGADI-LAGR 187

Query:   163 --GGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTL 220
                 GS  L+GDILV+ GA  +A+S V EE++VKK+ R E + M+G++G ++S +QL  +
Sbjct:   188 EDNSGSDVLIGDILVLLGASLYAVSNVCEEYIVKKLSRQEFLGMVGLFGTIISGIQLLIV 247

Query:   221 ELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRI 280
             E K +  ++W   I L FV  A   F  Y+ +P V+K++ AT + L +LT+D++++   +
Sbjct:   248 EYKDIARIQWDWKIALLFVAFALCMFCLYSFMPLVIKVTSATSVNLGILTADLYSLFFGL 307

Query:   281 FCYHQQVNWTYYLAFAAVLIGLIIYSTT 308
             F +  + +  Y L+F  +++G I+Y +T
Sbjct:   308 FLFEYKFSGLYILSFTVIMVGFILYCST 335

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0006810 "transport" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

WB|WBGene00022270 Y73E7A.3 [Caenorhabditis elegans (taxid:6239)]

 Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
 Identities = 97/279 (34%), Positives = 161/279 (57%)

Query:    41 TTAVITDLGVDAPITQS-----VLCY---LSLALAY--GGILLYRRQRLQVSWYWYLLLG 90
             ++ ++ +  V+AP  Q+     +LC+   +SLA      G+++  R+R    W  YL+L 
Sbjct:    80 SSQLLVNQNVNAPAAQAFSNYFLLCFVYCISLACKNDENGLVVVLRKR---GWR-YLILA 135

Query:    91 FVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASXXXXXX 150
              +DV+ N++  KA+Q+T+++SV LLDC  IP  +  +W+FL  RY    + G +      
Sbjct:   136 IIDVEANYMIVKAYQYTNLTSVQLLDCATIPTVLFLSWLFLSVRYLASHILGVTICIIGI 195

Query:   151 XXXXXSDA---EMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGV 207
                  +DA   + A  GGS  +LGDIL +A A+ +A+  V EEFLVK+  R E + M+G+
Sbjct:   196 ACVIWADALGDKGALDGGSNKVLGDILCLAAAVMYAICNVAEEFLVKQHSRTEYLGMLGL 255

Query:   208 YGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILS 267
             +G +VS VQ +  E ++L  + W   I+  F   A S F+FY+LV  VL+ + A M  LS
Sbjct:   256 FGCIVSGVQTAVFEQEALSKIVWDGTIVSYFALFAFSMFIFYSLVTVVLQKTSALMFNLS 315

Query:   268 VLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYS 306
              LT+D ++++  IF +    ++ Y+++F   +IG +IYS
Sbjct:   316 TLTADFYSLLFGIFMFKDTFHYLYFVSFIVCIIGSVIYS 354

GO:0016020 "membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

ASPGD|ASPL0000029133 AN5236 [Emericella nidulans (taxid:162425)]

 Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
 Identities = 75/278 (26%), Positives = 141/278 (50%)

Query:    38 SSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYR---RQRLQVSWY--W-YLLLGF 91
             ++F T ++ +   + P  Q+   Y  L + +    +Y+   +   ++ W   W Y++L F
Sbjct:    78 NTFNT-LLANKNTNIPAFQTFFNYSLLNIIFTSYTIYKYGIKGWFEMLWKRGWKYIILSF 136

Query:    92 VDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASXXXXXXX 151
              DV+GN+    A+++T++ S  L++  AI   +V +++FL  RY + Q+ G         
Sbjct:   137 CDVEGNYFMVLAYEYTTMMSAQLINFWAIVVVVVVSFLFLRVRYHISQVLGILICIGGMG 196

Query:   152 XXXXSDAEMAGGGG--SR--PLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGV 207
                 SD      GG  SR   + GD+  + GA F+ ++  GEEF V      EV+  +G 
Sbjct:   197 ILIASDHIQGTNGGDISRGNQIKGDLFALLGASFYGLANTGEEFFVSTAPVYEVIGQMGF 256

Query:   208 YGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILS 267
             +G++++ VQ +  + KS++   W   +     G      +FY+  P + +L+ A    +S
Sbjct:   257 FGMIINGVQAAIFDRKSIQHAHWDGQVGGYLTGYTLCLSIFYSTAPLLFRLASAAFFNIS 316

Query:   268 VLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIY 305
             +LT + W VI+ I  +H  V+W Y +AF  +++G ++Y
Sbjct:   317 LLTMNFWGVIIGIRVFHYSVHWMYPIAFVLIIVGQLVY 354

GO:0008150 "biological_process" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	344
pfam06027	336	pfam06027, DUF914, Eukaryotic protein of unknown f	2e-92
pfam08449	303	pfam08449, UAA, UAA transporter family	4e-05
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	9e-05
TIGR00950	260	TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Tran	6e-04

>gnl|CDD|218861 pfam06027, DUF914, Eukaryotic protein of unknown function (DUF914)

 Score =  278 bits (714), Expect = 2e-92
 Identities = 129/300 (43%), Positives = 194/300 (64%), Gaps = 8/300 (2%)

Query: 20  RTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRR--- 76
           RTL  L LGQ++S  +  ++ T+  + + GV+AP  Q+ L Y  L L Y GIL +RR   
Sbjct: 11  RTLIGLALGQILSLCITGTATTSQYLAEKGVNAPAFQTFLNYALLFLVYTGILAFRRGEK 70

Query: 77  ---QRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGT 133
                ++  W+ Y++L  +DV+ N+L  KA+Q+T+++SV LLDC AIP  +V +W FL  
Sbjct: 71  NLLVIIKRKWWKYIILALIDVEANYLVVKAYQYTNLTSVQLLDCWAIPVVLVLSWFFLKV 130

Query: 134 RYSVWQLFGASLCVLGLGLMLLSD--AEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEF 191
           RY    + G  +C+LG+  ++ SD  A     GGS P+LGDILV+AGA  +A+S V EEF
Sbjct: 131 RYRASHILGVVICILGVVCVVGSDVLAGRRAYGGSNPVLGDILVLAGATLYAVSNVTEEF 190

Query: 192 LVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTL 251
           LVKK+ R E + M+G++G ++S +Q +  E K+L  + W  +I L F G A   F+ Y+L
Sbjct: 191 LVKKLSRTEFLGMLGLFGAIISGIQTAIFERKALYKIHWDWEIGLLFAGFALCMFLLYSL 250

Query: 252 VPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKD 311
           +P ++K + ATM  LS+LTSD W++++ IF +H +V+W Y+LAFA ++IGLIIYS    D
Sbjct: 251 MPILIKKTSATMFNLSLLTSDFWSLLIGIFLFHYKVSWLYFLAFATIIIGLIIYSMKETD 310

This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as being putative membrane proteins. Length = 336

>gnl|CDD|219846 pfam08449, UAA, UAA transporter family

 Score = 44.5 bits (106), Expect = 4e-05
 Identities = 47/248 (18%), Positives = 96/248 (38%), Gaps = 23/248 (9%)

Query: 75  RRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTR 134
           + +  ++    Y+L+       + L N+A ++ S  +  +   C +   ++   +  G R
Sbjct: 56  KLKPRKIPLKTYVLIVATFFLSSVLNNEALKYISYPTHVIFKSCKLIPVMILGILIYGKR 115

Query: 135 YSVWQLFGASLCVLGLGLMLLSDAEMAGGGGS---RPLLGDILVIAGAIFFAMSYVG--E 189
           YS  Q   A L  LG+ +  L+ A+ +           +G I ++ GA+    +  G  +
Sbjct: 116 YSSLQYLSALLITLGVIIFTLASAKDSKNSKLTTFSDNVG-IALLFGALLM-DALTGNTQ 173

Query: 190 EFLVKKIDRVEVVCMIGVYGL-----LVSVVQLSTLELKSLES------VKWSTDIILSF 238
           E L KK  +     M   + L     L+ ++ + T  L S ES            ++ S 
Sbjct: 174 EKLYKKYGKHSKEMMFYSHLLSLPFFLLGLLDIRTGLLFSAESFCLRHPSVLFYLLLNSL 233

Query: 239 VGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAV 298
                  F+FY      +   GA  + L        +++L +  +   +    +L    V
Sbjct: 234 TQYVGQFFVFYL-----ISEFGALTVTLVTTLRKFVSLLLSVLLFGNPLTLQQWLGTLLV 288

Query: 299 LIGLIIYS 306
            +G+ +Y+
Sbjct: 289 FLGIFLYA 296

This family includes transporters with a specificity for UDP-N-acetylglucosamine. Length = 303

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 43.3 bits (102), Expect = 9e-05
 Identities = 71/298 (23%), Positives = 125/298 (41%), Gaps = 10/298 (3%)

Query: 14  RSQMALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILL 73
           +  + L  L LLL G L   S          +      A   + ++  L L         
Sbjct: 2   KRALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLF-AAALRFLIAALLLLPLLLLEPR 60

Query: 74  YRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTW-VFLG 132
             R  L+      LL          L   A ++TS S  +L+         +    + LG
Sbjct: 61  GLRPALRPWLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLG 120

Query: 133 TRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFL 192
            R S+ Q+ G  L + G+ L+LL      GGGG   LLG +L +A A+ +A+       L
Sbjct: 121 ERLSLLQILGILLALAGVLLILLGG----GGGGILSLLGLLLALAAALLWALYTA----L 172

Query: 193 VKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLV 252
           VK++ R+  V +  +  LL++++ L    L    +   S   +L       S+ + Y L 
Sbjct: 173 VKRLSRLGPVTLALLLQLLLALLLLLLFFLSGFGAPILSRAWLLLLYLGVFSTGLAYLLW 232

Query: 253 PFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAK 310
            + L+L GA+++ L  L   ++A +L +    + ++    L  A V++G+++ S  A+
Sbjct: 233 YYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLRAR 290

Length = 292

>gnl|CDD|233205 TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Transporter

 Score = 40.8 bits (96), Expect = 6e-04
 Identities = 48/249 (19%), Positives = 94/249 (37%), Gaps = 21/249 (8%)

Query: 64  LALAYGGILL--YRRQRLQVSWYW-YLLLGFVDVQ-GNFLFNKAFQFTSISSVTLLDCCA 119
             L +  +LL    R+R  +      LLLG + +     L+  A +   +    LL   A
Sbjct: 24  RRLIFALLLLLPLLRRRPPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALLLYLA 83

Query: 120 IPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGA 179
                + + +    R     L  A L + G  L+L      + G  S    G +L +   
Sbjct: 84  PLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLL------SDGNLSINPAGLLLGLGSG 137

Query: 180 IFFAMSYVGEEFLVKK-----IDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDI 234
           I FA+  V  + LVKK     +     V ++G   LL+              S++W   +
Sbjct: 138 ISFALGTVLYKRLVKKEGPELLQFTGWVLLLG--ALLLLPFAWFLGPNPQALSLQWGALL 195

Query: 235 ILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLA 294
            L  +G A + F++   +  V   + + + +   L     A++L +    + ++    + 
Sbjct: 196 YLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLV----ALLLGLLILGETLSLPQLIG 251

Query: 295 FAAVLIGLI 303
            A ++  ++
Sbjct: 252 GALIIAAVL 260

[Transport and binding proteins, Amino acids, peptides and amines]. Length = 260

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	344
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	100.0
PLN00411	358	nodulin MtN21 family protein; Provisional	100.0
PRK11272	292	putative DMT superfamily transporter inner membran	100.0
PRK11689	295	aromatic amino acid exporter; Provisional	100.0
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	100.0
KOG2766	336	consensus Predicted membrane protein [Function unk	99.97
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.97
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.97
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.97
PRK15430	296	putative chloramphenical resistance permease RarD;	99.96
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.96
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.94
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.93
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.91
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.91
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.9
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.88
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.86
COG2962	293	RarD Predicted permeases [General function predict	99.83
KOG1581	327	consensus UDP-galactose transporter related protei	99.82
KOG2765	416	consensus Predicted membrane protein [Function unk	99.82
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.8
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.76
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.75
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.73
KOG1580	337	consensus UDP-galactose transporter related protei	99.71
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.68
KOG1582	367	consensus UDP-galactose transporter related protei	99.62
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.57
COG2510	140	Predicted membrane protein [Function unknown]	99.5
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	99.49
COG2510	140	Predicted membrane protein [Function unknown]	99.48
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.4
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.39
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	99.37
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.31
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.31
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.25
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.23
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.23
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	99.14
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	99.13
PRK15430	296	putative chloramphenical resistance permease RarD;	99.06
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.05
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.02
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.02
PRK13499	345	rhamnose-proton symporter; Provisional	98.93
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.88
KOG2922	335	consensus Uncharacterized conserved protein [Funct	98.85
PLN00411	358	nodulin MtN21 family protein; Provisional	98.76
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.64
PRK11272	292	putative DMT superfamily transporter inner membran	98.63
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.61
COG2962	293	RarD Predicted permeases [General function predict	98.6
PRK11689	295	aromatic amino acid exporter; Provisional	98.58
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.54
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.53
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.49
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	98.43
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.39
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.39
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.37
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.26
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.23
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	98.04
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	98.0
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.89
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.85
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.78
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.69
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.69
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	97.69
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.62
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.61
COG2076	106	EmrE Membrane transporters of cations and cationic	97.56
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.55
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	97.52
COG2076	106	EmrE Membrane transporters of cations and cationic	97.52
PRK11431	105	multidrug efflux system protein; Provisional	97.49
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.41
PRK11431	105	multidrug efflux system protein; Provisional	97.4
PRK13499	345	rhamnose-proton symporter; Provisional	97.37
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.3
KOG4510	346	consensus Permease of the drug/metabolite transpor	97.26
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.23
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	97.21
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.09
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.83
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.65
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	96.64
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	96.48
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	96.31
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	96.06
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	95.75
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	95.75
KOG1580	337	consensus UDP-galactose transporter related protei	95.7
KOG2765	416	consensus Predicted membrane protein [Function unk	95.48
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	95.42
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	94.95
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	94.68
KOG2922	335	consensus Uncharacterized conserved protein [Funct	94.62
KOG1581	327	consensus UDP-galactose transporter related protei	94.52
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	92.59
KOG4831	125	consensus Unnamed protein [Function unknown]	92.21
PF07168	336	Ureide_permease: Ureide permease; InterPro: IPR009	89.72
KOG3912	372	consensus Predicted integral membrane protein [Gen	89.33
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	87.75
PRK02237	109	hypothetical protein; Provisional	87.22
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	86.08
PRK02237	109	hypothetical protein; Provisional	86.07
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	86.03
PF08507	136	COPI_assoc: COPI associated protein; InterPro: IPR	85.86
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	84.63
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	84.25

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=100.00  E-value=3.8e-39  Score=287.09  Aligned_cols=299  Identities=41%  Similarity=0.757  Sum_probs=274.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHhhccc------cccchHHHHHHH
Q 019247           17 MALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQR------LQVSWYWYLLLG   90 (344)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~------~~~~~~~~~~~g   90 (344)
                      ++|+.++.+++|+++++++++++..++.+.+++...|..++++.+....++..++..+|++.      .+++|+++++++
T Consensus         7 ~~~~~~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla   86 (334)
T PF06027_consen    7 FTRRFWIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLA   86 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHH
Confidence            67999999999999999999999999999999887799999999999999988887766543      567899999999


Q ss_pred             HHHHHHHHHHHHhhhccchhHHHHhhcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhceeeeeccccc--CCCCCCch
Q 019247           91 FVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEM--AGGGGSRP  168 (344)
Q Consensus        91 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~--~~~~~~~~  168 (344)
                      ++.+.+|++.+.|++|++.+.++++.++..+++++++++++|||+++.|++|+.+++.|+.++...|..+  +.+..++.
T Consensus        87 ~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~  166 (334)
T PF06027_consen   87 LLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNP  166 (334)
T ss_pred             HHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCcc
Confidence            9999999999999999999999999999999999999999999999999999999999999999987542  22245678


Q ss_pred             HHHHHHHHHhHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHHHH
Q 019247          169 LLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMF  248 (344)
Q Consensus       169 ~~G~~l~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (344)
                      ..|+++++.|+++||+++++.|+..++.|+....++.++++.++..+....+|..++...+|+......+++..++.+..
T Consensus       167 i~GDll~l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~~lf~~  246 (334)
T PF06027_consen  167 ILGDLLALLGAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYALCLFLF  246 (334)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHHHHHHH
Confidence            89999999999999999999999999999999999999999999988888899888888888888778888888889999


Q ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhccccCCCCC
Q 019247          249 YTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLPI  315 (344)
Q Consensus       249 ~~~~~~~l~~~~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~~~  315 (344)
                      |.+....++..+|+..++...+..+++++++++++|+++++..++|.++|++|.+++...+++.+++
T Consensus       247 y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~~~~  313 (334)
T PF06027_consen  247 YSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPEEEA  313 (334)
T ss_pred             HHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCccccc
Confidence            9999999999999999999999999999999999999999999999999999999999877654443

Some of the sequences in this family are annotated as putative membrane proteins.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=100.00  E-value=9.4e-33  Score=251.46  Aligned_cols=278  Identities=14%  Similarity=0.155  Sum_probs=211.7

Q ss_pred             HHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHhhcc--c-c---ccchHHHHHHHHHHHHHHHHHHHhhhc
Q 019247           33 FSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQ--R-L---QVSWYWYLLLGFVDVQGNFLFNKAFQF  106 (344)
Q Consensus        33 ~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~--~-~---~~~~~~~~~~g~~~~~~~~~~~~al~~  106 (344)
                      ++..+.....+...+.+. +|+.+.++|+.+++++++++.+++++  + .   ++++....+.|+++...+.+++.|++|
T Consensus        23 ~~~~~~~~~~k~a~~~G~-~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~~~~~~~~~gl~~  101 (358)
T PLN00411         23 TSVVGISTLFKVATSKGL-NIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGSMYVITGYIGIEY  101 (358)
T ss_pred             HHHHHHHHHHHHHHHCCC-CccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            455666666666666677 99999999999999999998865432  1 2   233456777777774346688999999


Q ss_pred             cchhHHHHhhcCchhHHHHHHHHH------hcccchHHHHHHHHHHhhhceeeeeccccc------------------CC
Q 019247          107 TSISSVTLLDCCAIPCAIVFTWVF------LGTRYSVWQLFGASLCVLGLGLMLLSDAEM------------------AG  162 (344)
Q Consensus       107 ~~~~~~~~l~~~~p~~~~lla~l~------l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~------------------~~  162 (344)
                      ++++.++++.+++|+++.++++++      +|||+++++++|++++++|+.++...+...                  +.
T Consensus       102 tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~  181 (358)
T PLN00411        102 SNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLS  181 (358)
T ss_pred             ccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccccccccccccccC
Confidence            999999999999999999999999      699999999999999999999876532110                  00


Q ss_pred             CCCCchHHHHHHHHHhHHHHHHHHHHHHHhhcCCCh-HHHHHHHHHHHHHHHHHHHHhhccccccc--cccchhhHHHHH
Q 019247          163 GGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDR-VEVVCMIGVYGLLVSVVQLSTLELKSLES--VKWSTDIILSFV  239 (344)
Q Consensus       163 ~~~~~~~~G~~l~l~~~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  239 (344)
                      ....+...|+++.+.++++||+|++.+|+..++.++ ...+++...++.+...++....++.+...  ..++...+..++
T Consensus       182 ~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~y  261 (358)
T PLN00411        182 SSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITLITIVT  261 (358)
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHHHHHHH
Confidence            111223569999999999999999999999887754 45566666666665545555544322211  122222222222


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhccccCC
Q 019247          240 GNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDL  312 (344)
Q Consensus       240 ~~~~~~~~~~~~~~~~l~~~~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~  312 (344)
                      .. +.+.++|.+|++++++.+|.+++...+++|+++++++++++||++++.+++|+++|+.|+++.++.++++
T Consensus       262 ~~-i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~~~  333 (358)
T PLN00411        262 MA-IITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKANE  333 (358)
T ss_pred             HH-HHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhhhh
Confidence            22 3356789999999999999999999999999999999999999999999999999999999998755544

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=100.00  E-value=6.3e-31  Score=235.68  Aligned_cols=281  Identities=15%  Similarity=0.128  Sum_probs=223.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHhhcc--ccccchHHHHHHHHHHHHH
Q 019247           19 LRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQ--RLQVSWYWYLLLGFVDVQG   96 (344)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~--~~~~~~~~~~~~g~~~~~~   96 (344)
                      -|.+..++...+...++|++++...|...++. +|..++++|+..++++++++...+++  +.++++......|.++...
T Consensus         3 ~~~~~~~~~~~~~~~~iWg~~~~~~K~~~~~~-~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   81 (292)
T PRK11272          3 FRQLLPLFGALFALYIIWGSTYLVIRIGVESW-PPLMMAGVRFLIAGILLLAFLLLRGHPLPTLRQWLNAALIGLLLLAV   81 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHhhHHHHHHHHhccC-CHHHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHH
Confidence            35566778888888999999999999888776 99999999999999998888765443  2344566677778776444


Q ss_pred             -HHHHHHhh-hccchhHHHHhhcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhceeeeecccccCCCCCCchHHHHHH
Q 019247           97 -NFLFNKAF-QFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDIL  174 (344)
Q Consensus        97 -~~~~~~al-~~~~~~~~~~l~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l  174 (344)
                       +.+++.+. ++++++.++++.++.|+++.+++++ +|||+++++++|+.++++|+.++...+     +. .....|+++
T Consensus        82 ~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~-----~~-~~~~~G~l~  154 (292)
T PRK11272         82 GNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGG-----NL-SGNPWGAIL  154 (292)
T ss_pred             HHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCc-----cc-ccchHHHHH
Confidence             77788888 9999999999999999999999985 699999999999999999998875422     11 233579999


Q ss_pred             HHHhHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccccccc-cccchhhHHHHHHHHHHHHHHHHHHH
Q 019247          175 VIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLES-VKWSTDIILSFVGNAASSFMFYTLVP  253 (344)
Q Consensus       175 ~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (344)
                      +++++++||.+.+..||..++ ++.....+....+..... +........... .+...+....+.++ +++..++.+|+
T Consensus       155 ~l~a~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~l~i-~~s~~~~~l~~  231 (292)
T PRK11272        155 ILIASASWAFGSVWSSRLPLP-VGMMAGAAEMLAAGVVLL-IASLLSGERLTALPTLSGFLALGYLAV-FGSIIAISAYM  231 (292)
T ss_pred             HHHHHHHHHHHHHHHHhcCCC-cchHHHHHHHHHHHHHHH-HHHHHcCCcccccCCHHHHHHHHHHHH-HHHHHHHHHHH
Confidence            999999999999999997654 445556677777766663 333222222111 12233444455555 66889999999


Q ss_pred             HHHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhcccc
Q 019247          254 FVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAK  310 (344)
Q Consensus       254 ~~l~~~~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  310 (344)
                      +++++.++..++...+++|+++++++++++||++++.+++|+.+++.|+++.+..++
T Consensus       232 ~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~  288 (292)
T PRK11272        232 YLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY  288 (292)
T ss_pred             HHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999999999999877554

>PRK11689 aromatic amino acid exporter; Provisional

Probab=100.00  E-value=1e-30  Score=234.55  Aligned_cols=274  Identities=14%  Similarity=0.112  Sum_probs=206.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHhhccccccchHHHHHHHHHHHHH-HHHHHHhhhc
Q 019247           28 GQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQG-NFLFNKAFQF  106 (344)
Q Consensus        28 ~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~al~~  106 (344)
                      ..+.+.++|++++...|...++. +|..+.++|+.++++++.++..  +++.++.+++..+.+.+.... +.+++.++++
T Consensus         8 ~~l~a~~~Wg~~~~~~k~~~~~~-~P~~~~~~R~~~a~l~l~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~   84 (295)
T PRK11689          8 IGLIAILLWSTMVGLIRGVSESL-GPVGGAAMIYSVSGLLLLLTVG--FPRLRQFPKRYLLAGGLLFVSYEICLALSLGY   84 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHHccC-ChHHHHHHHHHHHHHHHHHHcc--ccccccccHHHHHHHhHHHHHHHHHHHHHHHH
Confidence            35566789999999999988787 9999999999999998877542  222333344455556555544 5566667654


Q ss_pred             ----cchhHHHHhhcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhceeeeecccccCC----CCCCchHHHHHHHHHh
Q 019247          107 ----TSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAG----GGGSRPLLGDILVIAG  178 (344)
Q Consensus       107 ----~~~~~~~~l~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~----~~~~~~~~G~~l~l~~  178 (344)
                          .+++.++++.+++|+++.+++++++|||+++++++|++++++|+.++..++...+.    +...+...|+.+++.+
T Consensus        85 ~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~l~a  164 (295)
T PRK11689         85 ANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGLAFIG  164 (295)
T ss_pred             hhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHHHHHH
Confidence                57788899999999999999999999999999999999999999998865421000    0112235699999999


Q ss_pred             HHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 019247          179 AIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKL  258 (344)
Q Consensus       179 ~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  258 (344)
                      +++||+|+++.||..++.++.....   ..+.+....+.. .++......++..+.+..+  .+++++.+|.+|++++++
T Consensus       165 a~~~A~~~v~~k~~~~~~~~~~~~~---~~~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~--~~~~t~~~~~l~~~al~~  238 (295)
T PRK11689        165 AFIWAAYCNVTRKYARGKNGITLFF---ILTALALWIKYF-LSPQPAMVFSLPAIIKLLL--AAAAMGFGYAAWNVGILH  238 (295)
T ss_pred             HHHHHHHHHHHhhccCCCCchhHHH---HHHHHHHHHHHH-HhcCccccCCHHHHHHHHH--HHHHHHHHHHHHHHHHHc
Confidence            9999999999999887777665432   222233322222 2222211223333333333  335688899999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhcccc
Q 019247          259 SGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAK  310 (344)
Q Consensus       259 ~~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  310 (344)
                      .++..++...+++|+++++++++++||++++.+++|+++|+.|+++....++
T Consensus       239 ~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~~  290 (295)
T PRK11689        239 GNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLATR  290 (295)
T ss_pred             cCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhHh
Confidence            9999999999999999999999999999999999999999999999876554

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=100.00  E-value=8.3e-30  Score=229.21  Aligned_cols=272  Identities=15%  Similarity=0.146  Sum_probs=205.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHhhccccccchHHHHHHHHHHHHH-HHHHHHhhhc-
Q 019247           29 QLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQG-NFLFNKAFQF-  106 (344)
Q Consensus        29 ~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~al~~-  106 (344)
                      .+.+.++|++++...|...++. +|..++++|+.++++.++++..++    +.+++.....|.+.... ..+++.+++| 
T Consensus         9 ~l~~~~~Wg~~~~~~k~~~~~~-~p~~~~~~R~~~a~~~l~~~~~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   83 (299)
T PRK11453          9 ALLVVVVWGLNFVVIKVGLHNM-PPLMLAGLRFMLVAFPAIFFVARP----KVPLNLLLGYGLTISFGQFAFLFCAINFG   83 (299)
T ss_pred             HHHHHHHHhhhHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHHHhcCC----CCchHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            4566789999999999888776 999999999999887766654321    12333444455554444 4466788988 


Q ss_pred             cchhHHHHhhcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhceeeeecccccCCCCCCchHHHHHHHHHhHHHHHHHH
Q 019247          107 TSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSY  186 (344)
Q Consensus       107 ~~~~~~~~l~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l~~~~~~a~~~  186 (344)
                      .+++.++++.+++|+++.+++++++|||++++++++++++++|+.++..++.    +.......|+.+++.++++|+.|.
T Consensus        84 ~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~----~~~~~~~~G~~l~l~aal~~a~~~  159 (299)
T PRK11453         84 MPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSL----NGQHVAMLGFMLTLAAAFSWACGN  159 (299)
T ss_pred             CCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccC----CCcchhHHHHHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999999999998876431    112223579999999999999999


Q ss_pred             HHHHHhhcCCChH---HHHHHHHHHHHHHHHHHHHhhcccc-----ccccccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 019247          187 VGEEFLVKKIDRV---EVVCMIGVYGLLVSVVQLSTLELKS-----LESVKWSTDIILSFVGNAASSFMFYTLVPFVLKL  258 (344)
Q Consensus       187 v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  258 (344)
                      ++.||..++.+..   ....+....+.+.........+++.     ....++..+....+.++ +++...|.+|++++++
T Consensus       160 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i-~~t~~~~~l~~~~l~~  238 (299)
T PRK11453        160 IFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAF-VATIVGYGIWGTLLGR  238 (299)
T ss_pred             HHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHh
Confidence            9999986654332   3333444443332211222223211     11222334444555665 7788999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhcccc
Q 019247          259 SGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAK  310 (344)
Q Consensus       259 ~~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  310 (344)
                      .++.+++...+++|+++.+++++++||++++.+++|+++|++|+++..+.++
T Consensus       239 ~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~  290 (299)
T PRK11453        239 YETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR  290 (299)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence            9999999999999999999999999999999999999999999999876554

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.97  E-value=1.8e-32  Score=225.98  Aligned_cols=301  Identities=42%  Similarity=0.800  Sum_probs=267.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHhhccccccchHHHHHHHHHHHHHH
Q 019247           18 ALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGN   97 (344)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   97 (344)
                      .+|.++++.+|+++++++.+.++.++.++.++...|..++|..+.+.+++..+++.+|++..+..|++++++++..+-+|
T Consensus        13 tkk~li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~~~~~~~~hYilla~~DVEaN   92 (336)
T KOG2766|consen   13 TKKTLIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRRKYIKAKWRHYILLAFVDVEAN   92 (336)
T ss_pred             chhhhheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhhHHHHHHHHHhhheeEEeeccc
Confidence            68899999999999999999999999999999988999999999999999999999988777888999999999999999


Q ss_pred             HHHHHhhhccchhHHHHhhcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhceeeeecccc-cCCCCCCchHHHHHHHH
Q 019247           98 FLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAE-MAGGGGSRPLLGDILVI  176 (344)
Q Consensus        98 ~~~~~al~~~~~~~~~~l~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~-~~~~~~~~~~~G~~l~l  176 (344)
                      ++...|+||++...++++.+-..+.+.+++|+++|.|.++.++.|+++|+.|+.++..+|-. ++..++++...|+.+.+
T Consensus        93 y~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi  172 (336)
T KOG2766|consen   93 YFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVI  172 (336)
T ss_pred             EEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEE
Confidence            99999999999999999999999999999999999999999999999999999999998865 45556788899999999


Q ss_pred             HhHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 019247          177 AGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVL  256 (344)
Q Consensus       177 ~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  256 (344)
                      +++-+||..++..+...|+.|..+++....++|+++..+. .+++........|+..... ++...+++++.|.+....+
T Consensus       173 ~GATlYaVSNv~EEflvkn~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~tl~w~~~i~~-yl~f~L~MFllYsl~pil~  250 (336)
T KOG2766|consen  173 AGATLYAVSNVSEEFLVKNADRVELMGFLGLFGAIISAIQ-FIFERHHVSTLHWDSAIFL-YLRFALTMFLLYSLAPILI  250 (336)
T ss_pred             ecceeeeeccccHHHHHhcCcHHHHHHHHHHHHHHHHHHH-HhhhccceeeEeehHHHHH-HHHHHHHHHHHHHhhHHhe
Confidence            9999999999999999999999999999999999999877 6666666666667644444 3446688999999999999


Q ss_pred             HHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhccccCCCCCCcccCCC
Q 019247          257 KLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLPIPALENGN  322 (344)
Q Consensus       257 ~~~~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~~~~~~~~~~  322 (344)
                      |..+++..++..+++-.++.++  ..||-..+|..++..+.+..|.++|..+++.+++.+..+..+
T Consensus       251 k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~re~~~~e~r~~~v~~  314 (336)
T KOG2766|consen  251 KTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTREKDEEELRKGQVVS  314 (336)
T ss_pred             ecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeeccccCcHhhccCcccc
Confidence            9999999999999999999988  566777999999999999999999976666555444444333

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.97  E-value=4.6e-29  Score=220.37  Aligned_cols=256  Identities=17%  Similarity=0.060  Sum_probs=207.3

Q ss_pred             HHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHhhccccccchHHHHHHHHHHHHH-HHHHHHhhhccchhHHHH
Q 019247           36 ALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQG-NFLFNKAFQFTSISSVTL  114 (344)
Q Consensus        36 ~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~al~~~~~~~~~~  114 (344)
                      ||.++...|...++..+|....+.|...+.+++.+....+  +.++++.++...|.++... +.+++.|++|++++++++
T Consensus         1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~i   78 (260)
T TIGR00950         1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR--PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAAL   78 (260)
T ss_pred             CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc--cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHH
Confidence            7788888888776665889999999998888887765544  4555667788888877666 778899999999999999


Q ss_pred             hhcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhceeeeecccccCCCCCCchHHHHHHHHHhHHHHHHHHHHHHHhhc
Q 019247          115 LDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVK  194 (344)
Q Consensus       115 l~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l~~~~~~a~~~v~~~~~~~  194 (344)
                      +.++.|+++++++++++|||+++++++|+.++++|+.++...+      .......|+.+++.++++|+.+.+..|+..+
T Consensus        79 i~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~------~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~  152 (260)
T TIGR00950        79 LLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDG------NLSINPAGLLLGLGSGISFALGTVLYKRLVK  152 (260)
T ss_pred             HHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCC------cccccHHHHHHHHHHHHHHHHHHHHHhHHhh
Confidence            9999999999999999999999999999999999999986532      1234568999999999999999999999987


Q ss_pred             CCChH--HHHHHHHHHHHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 019247          195 KIDRV--EVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSD  272 (344)
Q Consensus       195 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~~~~~~~~p  272 (344)
                      +.|+.  ....+.+..+.++. .+.....++.. ..+...+....+.+. +++..+|.++++++++.++.+++.+.+++|
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~~~~~~s~~~~~~p  229 (260)
T TIGR00950       153 KEGPELLQFTGWVLLLGALLL-LPFAWFLGPNP-QALSLQWGALLYLGL-IGTALAYFLWNKGLTLVDPSAASILALAEP  229 (260)
T ss_pred             cCCchHHHHHHHHHHHHHHHH-HHHHHhcCCCC-CcchHHHHHHHHHHH-HHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Confidence            76643  44445677777766 34433322221 122223333444455 667889999999999999999999999999


Q ss_pred             HHHHHHHHHHhccccchhhHhHHHHHHHHH
Q 019247          273 MWAVILRIFCYHQQVNWTYYLAFAAVLIGL  302 (344)
Q Consensus       273 ~~~~i~~~~~~~e~~~~~~~~G~~li~~g~  302 (344)
                      +++++++++++||++++.+++|+.+++.|+
T Consensus       230 v~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       230 LVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            999999999999999999999999999986

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.97  E-value=5.8e-28  Score=216.52  Aligned_cols=270  Identities=16%  Similarity=0.100  Sum_probs=206.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHhhc-cccccchHHHHHHHHHHHHHHHHHHHhhh
Q 019247           27 LGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRR-QRLQVSWYWYLLLGFVDVQGNFLFNKAFQ  105 (344)
Q Consensus        27 ~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~al~  105 (344)
                      ...+.+.+.|+.+....|...++. +|..+.++|+.+++++++++...++ +..+++++..+..|.+....+.+++.+++
T Consensus        15 ~~~~la~~~~~~~~~~~K~~~~~~-~~~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~   93 (293)
T PRK10532         15 LLLLIAMASIQSGASLAKSLFPLV-GAPGVTALRLALGTLILIAIFKPWRLRFAKEQRLPLLFYGVSLGGMNYLFYLSIQ   93 (293)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHhHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            344456677888888888777666 9999999999999998887764332 23355666777788776555888899999


Q ss_pred             ccchhHHHHhhcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhceeeeecccccCCCCCCchHHHHHHHHHhHHHHHHH
Q 019247          106 FTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMS  185 (344)
Q Consensus       106 ~~~~~~~~~l~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l~~~~~~a~~  185 (344)
                      |++++.++++..+.|+++.+++    +||++..  .++.++++|+.++...+.    +.+..+..|+++.++++++||.|
T Consensus        94 ~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~~--~~~~i~~~Gv~li~~~~~----~~~~~~~~G~ll~l~aa~~~a~~  163 (293)
T PRK10532         94 TVPLGIAVALEFTGPLAVALFS----SRRPVDF--VWVVLAVLGLWFLLPLGQ----DVSHVDLTGAALALGAGACWAIY  163 (293)
T ss_pred             cccHHHHHHHHHHHHHHHHHHh----cCChHHH--HHHHHHHHHHheeeecCC----CcccCChHHHHHHHHHHHHHHHH
Confidence            9999999999999999998877    3665544  456778999988775331    11223457999999999999999


Q ss_pred             HHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Q 019247          186 YVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLI  265 (344)
Q Consensus       186 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~~  265 (344)
                      .+..||..++.++... .+..+++.++. .+....+... ...++..+....+.++ +++..+|.+|++++++.++..++
T Consensus       164 ~v~~r~~~~~~~~~~~-~~~~~~~~~~l-~~~~~~~~~~-~~~~~~~~~~~l~lgv-~~t~~~~~l~~~~~~~~~a~~as  239 (293)
T PRK10532        164 ILSGQRAGAEHGPATV-AIGSLIAALIF-VPIGALQAGE-ALWHWSILPLGLAVAI-LSTALPYSLEMIALTRLPTRTFG  239 (293)
T ss_pred             HHHHHHHhccCCchHH-HHHHHHHHHHH-HHHHHHccCc-ccCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcChhHHH
Confidence            9999999877777665 44555665555 3444332221 1122222333345556 77889999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhccccC
Q 019247          266 LSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKD  311 (344)
Q Consensus       266 ~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~  311 (344)
                      ...+++|+++.+++++++||++++.+++|+++|++|++...++.++
T Consensus       240 ~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~  285 (293)
T PRK10532        240 TLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRR  285 (293)
T ss_pred             HHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCC
Confidence            9999999999999999999999999999999999999999876544

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.97  E-value=1.2e-28  Score=222.27  Aligned_cols=265  Identities=12%  Similarity=0.086  Sum_probs=203.2

Q ss_pred             HHHhhcCCChhHHHHHHHHHHHHHHHHHHHH---hhc-cccccchHHHHHHHHHHHHHHHHHHHhhhccchhHHHHhhcC
Q 019247           43 AVITDLGVDAPITQSVLCYLSLALAYGGILL---YRR-QRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCC  118 (344)
Q Consensus        43 ~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~---~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~  118 (344)
                      +|...+....|...++.|+..+.+.+.+...   .++ +..+++++..+..|++......+.+.|++|++++.++++.++
T Consensus        21 NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~s~s~~~li~~~  100 (302)
T TIGR00817        21 NKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHVTSNVSLSKVAVSFTHTIKAM  100 (302)
T ss_pred             HHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHhc
Confidence            3555556667999999999998877655521   111 223557788888999876668889999999999999999999


Q ss_pred             chhHHHHHHHHHhcccchHHHHHHHHHHhhhceeeeecccccCCCCCCchHHHHHHHHHhHHHHHHHHHHHHHhhc--CC
Q 019247          119 AIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVK--KI  196 (344)
Q Consensus       119 ~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l~~~~~~a~~~v~~~~~~~--~~  196 (344)
                      +|+++++++++++|||+++++++|++++++|+.+....+       .+....|++++++++++|+++.+..||..+  +.
T Consensus       101 ~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~-------~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~  173 (302)
T TIGR00817       101 EPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTE-------LSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSL  173 (302)
T ss_pred             chHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCc-------ccccHHHHHHHHHHHHHHHHHHHHHHHhhccCCC
Confidence            999999999999999999999999999999998653311       133457999999999999999999999987  67


Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHhhcccccccccc-------c-hhhHH-HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Q 019247          197 DRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKW-------S-TDIIL-SFVGNAASSFMFYTLVPFVLKLSGATMLILS  267 (344)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~a~~~~~~  267 (344)
                      |+.+.+.+....+.+...+.....++.+....++       . ...+. .+.....+....+.+++.++++.++.+.++.
T Consensus       174 ~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~  253 (302)
T TIGR00817       174 DKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVG  253 (302)
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHH
Confidence            9999999999998887743333333322111000       1 11121 1111111233344566689999999999999


Q ss_pred             HHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhccccCCCC
Q 019247          268 VLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLP  314 (344)
Q Consensus       268 ~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~~  314 (344)
                      .+++|+++++++++++||+++..+++|.++++.|++++++.+++|++
T Consensus       254 ~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~~~~  300 (302)
T TIGR00817       254 NCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQKPK  300 (302)
T ss_pred             hhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhccCcC
Confidence            99999999999999999999999999999999999999976544433

specificities overlap.

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.96  E-value=7.3e-27  Score=209.71  Aligned_cols=272  Identities=14%  Similarity=0.063  Sum_probs=194.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHhhccc-c----ccchH--HHHHHHHH
Q 019247           20 RTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQR-L----QVSWY--WYLLLGFV   92 (344)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~-~----~~~~~--~~~~~g~~   92 (344)
                      ++.++.+... .+.++|+.+....|.. .+. +|.++.++|+.++.++++++...+++. .    .++++  .....+.+
T Consensus         5 ~~~~g~~~~l-~a~~~wg~~~~~~k~~-~~~-~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (296)
T PRK15430          5 QTRQGVLLAL-AAYFIWGIAPAYFKLI-YYV-PADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAV   81 (296)
T ss_pred             hhhhHHHHHH-HHHHHHHHHHHHHHHh-cCC-CHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHH
Confidence            4445665544 4566788877777765 355 899999999999998887776543211 0    11222  22335555


Q ss_pred             HHHH-HHHHHHhhhccchhHHHHhhcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhceeeeecccccCCCCCCchHHH
Q 019247           93 DVQG-NFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLG  171 (344)
Q Consensus        93 ~~~~-~~~~~~al~~~~~~~~~~l~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G  171 (344)
                      +... +.+++.|++++++++++++.++.|+++.+++++++|||+++++++|++++++|+.++..++    +   +.    
T Consensus        82 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~----~---~~----  150 (296)
T PRK15430         82 LIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTF----G---SL----  150 (296)
T ss_pred             HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHc----C---Cc----
Confidence            5555 8889999999999999999999999999999999999999999999999999999886532    1   11    


Q ss_pred             HHHHHHhHHHHHHHHHHHHHhhcCCC--hHHHHHHHHHHHHHHHHHHHHhhccccccccccchh-hHHHHHHHHHHHHHH
Q 019247          172 DILVIAGAIFFAMSYVGEEFLVKKID--RVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTD-IILSFVGNAASSFMF  248 (344)
Q Consensus       172 ~~l~l~~~~~~a~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  248 (344)
                      ..+.++++++||.|.+..|+..++..  ......+....+.+.. .+.  .+.. ......... .+..++..++.+.++
T Consensus       151 ~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~-~~~~~~~~~~~~~~~~~~g~~t~i~  226 (296)
T PRK15430        151 PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYL-FAI--ADSS-TSHMGQNPMSLNLLLIAAGIVTTVP  226 (296)
T ss_pred             cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH-HHH--ccCC-cccccCCcHHHHHHHHHHHHHHHHH
Confidence            14678899999999999998754322  2222333333333322 111  1111 111111111 122233333456789


Q ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhccc
Q 019247          249 YTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA  309 (344)
Q Consensus       249 ~~~~~~~l~~~~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  309 (344)
                      |.+|++++++.++..++...+++|+++.+++++++||++++.+++|+++|+.|+.+...+.
T Consensus       227 ~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~  287 (296)
T PRK15430        227 LLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDA  287 (296)
T ss_pred             HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999988888776543

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.96  E-value=6.6e-26  Score=207.41  Aligned_cols=256  Identities=14%  Similarity=0.105  Sum_probs=197.9

Q ss_pred             HHhhcCCChhHHHHHHHHHHHHHHHHHHHHh--hc-cc---cccchHHHHHHHHHHHHHHHHHHHhhhccchhHHHHhhc
Q 019247           44 VITDLGVDAPITQSVLCYLSLALAYGGILLY--RR-QR---LQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDC  117 (344)
Q Consensus        44 ~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~--~~-~~---~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~  117 (344)
                      |...+.+..|.+++++|++++.+++..+...  ++ ++   .+.+++..+.+|+++...+...+.|+++++++.++++.+
T Consensus        69 K~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~~~~~~~~~sl~~~svs~~~iika  148 (350)
T PTZ00343         69 KLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHLFVHFGAVISMGLGAVSFTHVVKA  148 (350)
T ss_pred             HHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHH
Confidence            4445466339999999999998765544322  11 11   123567888999998888777789999999999999999


Q ss_pred             CchhHHHHHHHHHhcccchHHHHHHHHHHhhhceeeeecccccCCCCCCchHHHHHHHHHhHHHHHHHHHHHHHhhcCC-
Q 019247          118 CAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKI-  196 (344)
Q Consensus       118 ~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l~~~~~~a~~~v~~~~~~~~~-  196 (344)
                      +.|+++++++++++|||++++++.+++++++|+.+....+       ......|+++++++++++|+++++.|+..++. 
T Consensus       149 ~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~-------~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~  221 (350)
T PTZ00343        149 AEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKE-------LHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKS  221 (350)
T ss_pred             hhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheeccc-------chhHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            9999999999999999999999999999999999987632       12346799999999999999999999988654 


Q ss_pred             ------ChHHHHHHHHHHHHHHHHHHHHh-hccccccc------cccchhhHH-HHHHHHHHHHHHHHHHH----HHHHH
Q 019247          197 ------DRVEVVCMIGVYGLLVSVVQLST-LELKSLES------VKWSTDIIL-SFVGNAASSFMFYTLVP----FVLKL  258 (344)
Q Consensus       197 ------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~l~~  258 (344)
                            ++.....+....+.++. +|... .|......      ..+..+.+. .+... +.+++.+.+++    .++++
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~l~~-lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~s~l~~~l~n~~~f~~l~~  299 (350)
T PTZ00343        222 EIGENLTASNIYMLLTLIASLIS-LPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKI-FFSGVWYYLYNEVAFYCLGK  299 (350)
T ss_pred             cccccCCHHHHHHHHHHHHHHHH-HHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHH-HHHHHHHHHHHHHHHHHHhc
Confidence                  35555555677888777 45433 44321110      011111111 12223 44677777777    49999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhcc
Q 019247          259 SGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTT  308 (344)
Q Consensus       259 ~~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~  308 (344)
                      .++.+.++...++|+++++.+++++||++++.+++|.++++.|+++|++.
T Consensus       300 ~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~  349 (350)
T PTZ00343        300 VNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLF  349 (350)
T ss_pred             cchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence            99999999999999999999999999999999999999999999999864

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.94  E-value=4.5e-25  Score=196.80  Aligned_cols=265  Identities=15%  Similarity=0.097  Sum_probs=183.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHhh-----ccccccchHHHHHHHHHH-HHHHHHH
Q 019247           27 LGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYR-----RQRLQVSWYWYLLLGFVD-VQGNFLF  100 (344)
Q Consensus        27 ~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~-----~~~~~~~~~~~~~~g~~~-~~~~~~~  100 (344)
                      +....+++........++...+ . ++.  .+++.....+++.|+...+     +++.+++++.....+.++ .....++
T Consensus         5 ~~~~aa~~~a~~~~~~k~~~~~-~-~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (281)
T TIGR03340         5 LVVFSALMHAGWNLMAKSHADK-E-PDF--LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGL   80 (281)
T ss_pred             HHHHHHHHHHHHHHHHhhcCCc-h-hHH--HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHH
Confidence            3444444444445554445543 2 333  4666677777777776543     122234445455555544 4448888


Q ss_pred             HHhhhccchhHHHHhhcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhceeeeecccccCCCCCCchHHHHHHHHHhHH
Q 019247          101 NKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAI  180 (344)
Q Consensus       101 ~~al~~~~~~~~~~l~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l~~~~  180 (344)
                      +.|+++.+++.++++.++.|+++++++++++|||+++++|+|+.+++.|+.++..++.   .   .....|+.+++.+++
T Consensus        81 ~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~---~---~~~~~g~~~~l~aal  154 (281)
T TIGR03340        81 AQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRF---A---QHRRKAYAWALAAAL  154 (281)
T ss_pred             HHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccc---c---ccchhHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999998875431   1   123468889999999


Q ss_pred             HHHHHHHHHHHhhcCCChHH----HHHHHHHHH-HHHHHHHHHhhccccccccccchhhHHHHHHHHHHHHHHHHHHHHH
Q 019247          181 FFAMSYVGEEFLVKKIDRVE----VVCMIGVYG-LLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFV  255 (344)
Q Consensus       181 ~~a~~~v~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (344)
                      +|++|.+..|+..++.++..    ...+....+ .++. ......+.....  ......+......++++..+|.+|+++
T Consensus       155 ~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~s~l~~~l~~~a  231 (281)
T TIGR03340       155 GTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFL-LLYLKRHGRSMF--PYARQILPSATLGGLMIGGAYALVLWA  231 (281)
T ss_pred             HHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHH-HHHHHHhccchh--hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999988654443322    222222222 1211 111111111111  111112222233336678899999999


Q ss_pred             HHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHh
Q 019247          256 LKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLII  304 (344)
Q Consensus       256 l~~~~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l  304 (344)
                      +++.++..++...+++|+++.+++++++||+++..+++|+++++.|+++
T Consensus       232 l~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       232 MTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            9999999999999999999999999999999999999999999999876

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.93  E-value=3.2e-22  Score=179.26  Aligned_cols=268  Identities=23%  Similarity=0.290  Sum_probs=200.0

Q ss_pred             HHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHhhc---cccccchHHHHHHHHHHHHH-HHHHHHhhhcc
Q 019247           32 SFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRR---QRLQVSWYWYLLLGFVDVQG-NFLFNKAFQFT  107 (344)
Q Consensus        32 ~~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~---~~~~~~~~~~~~~g~~~~~~-~~~~~~al~~~  107 (344)
                      ..+.|+......+...++..++....+.|...+.+...+....++   ++..+++++..+.+.+.... ..+++.+++++
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (292)
T COG0697          15 WGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFLLLFLALKYT   94 (292)
T ss_pred             HHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            347788877777666655435666667799888888444443332   12222234555666555555 88889999999


Q ss_pred             chhHHHHhhcCchhHHHHHHH-HHhcccchHHHHHHHHHHhhhceeeeecccccCCCCCCchHHHHHHHHHhHHHHHHHH
Q 019247          108 SISSVTLLDCCAIPCAIVFTW-VFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSY  186 (344)
Q Consensus       108 ~~~~~~~l~~~~p~~~~lla~-l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l~~~~~~a~~~  186 (344)
                      +++.++++.++.|+++.++++ +++|||++++++.++.+.++|+.++..++.   .+... ...|+.+.+.+++++|++.
T Consensus        95 ~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~---~~~~~-~~~g~~~~l~a~~~~a~~~  170 (292)
T COG0697          95 SASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGG---GGGIL-SLLGLLLALAAALLWALYT  170 (292)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCC---cchhH-HHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999997 677999999999999999999999988653   11111 5789999999999999999


Q ss_pred             HHHHHhhcCCChHHHHH-HHHHHHHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Q 019247          187 VGEEFLVKKIDRVEVVC-MIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLI  265 (344)
Q Consensus       187 v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~~  265 (344)
                      +..|+.. +.++..... +... +......+....+..  ....+..+......+. ++++.++.++.++++..++..++
T Consensus       171 ~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~-~~~~i~~~~~~~~~~~~~~~~~~  245 (292)
T COG0697         171 ALVKRLS-RLGPVTLALLLQLL-LALLLLLLFFLSGFG--APILSRAWLLLLYLGV-FSTGLAYLLWYYALRLLGASLVA  245 (292)
T ss_pred             HHHHHhc-CCChHHHHHHHHHH-HHHHHHHHHHhcccc--ccCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCchHHH
Confidence            9999987 556655555 3333 222221222222111  1222234444445555 54568999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhcc
Q 019247          266 LSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTT  308 (344)
Q Consensus       266 ~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~  308 (344)
                      ....++|+++.+++++++||+++..+++|+.+++.|+++...+
T Consensus       246 ~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         246 LLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            9999999999999999999999999999999999999999876

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.91  E-value=2.2e-21  Score=174.71  Aligned_cols=273  Identities=17%  Similarity=0.225  Sum_probs=220.1

Q ss_pred             HHHHHHhhcCCCh--hHHHHHHHHHHHHHHHHHHHHhhc--cccccchHHHHHHHHHHHHHHHHHHHhhhccchhHHHHh
Q 019247           40 FTTAVITDLGVDA--PITQSVLCYLSLALAYGGILLYRR--QRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLL  115 (344)
Q Consensus        40 ~~~~~l~~~~~~~--p~~~~~~r~~~~~l~l~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l  115 (344)
                      ..-.++..+....  |..+++..+....+...+.....+  ++.+.+++.++..+++......+.+.|++|+|.+...++
T Consensus        17 ~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~~~   96 (303)
T PF08449_consen   17 ILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPKSRKIPLKKYAILSFLFFLASVLSNAALKYISYPTQIVF   96 (303)
T ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccCCCcChHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHH
Confidence            4444666554434  999999999998887776665433  455667789999999999999999999999999999999


Q ss_pred             hcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhceeeeecccccCCCC---CCchHHHHHHHHHhHHHHHHHHHHHHHh
Q 019247          116 DCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGG---GSRPLLGDILVIAGAIFFAMSYVGEEFL  192 (344)
Q Consensus       116 ~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~---~~~~~~G~~l~l~~~~~~a~~~v~~~~~  192 (344)
                      .++.|+.+++++.+++|+|++.+++.++.+..+|+.+....+...+...   ..+...|+.+.+.+.++.|...+.+||.
T Consensus        97 ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~qe~~  176 (303)
T PF08449_consen   97 KSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVYQEKL  176 (303)
T ss_pred             hhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999998765321111   1122349999999999999999999999


Q ss_pred             hcCC--ChHHHHHHHHHHHHHHHHHHHHhhc-cccccc---cccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Q 019247          193 VKKI--DRVEVVCMIGVYGLLVSVVQLSTLE-LKSLES---VKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLIL  266 (344)
Q Consensus       193 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~~~  266 (344)
                      .+++  ++.+.+++..+++.++..+.....+ ++....   ...++..+..+....++...+........++.++...++
T Consensus       177 ~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g~~~i~~~~~~~~al~~t~  256 (303)
T PF08449_consen  177 FKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALGQFFIFYLIKKFSALTTTI  256 (303)
T ss_pred             HHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhh
Confidence            8765  6889999999999998865544421 111111   112333444445555666777778888899999999999


Q ss_pred             HHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhccccCC
Q 019247          267 SVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDL  312 (344)
Q Consensus       267 ~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~  312 (344)
                      ...+..+++++++++++|+++++.+|+|.++++.|..++...++|+
T Consensus       257 v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~  302 (303)
T PF08449_consen  257 VTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK  302 (303)
T ss_pred             HHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence            9999999999999999999999999999999999999999877765

; GO: 0055085 transmembrane transport

>TIGR00688 rarD rarD protein

Probab=99.91  E-value=7e-22  Score=173.98  Aligned_cols=237  Identities=15%  Similarity=0.019  Sum_probs=166.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHhhcc------c---c-ccc-hHHHHHHHHHHHHH
Q 019247           28 GQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQ------R---L-QVS-WYWYLLLGFVDVQG   96 (344)
Q Consensus        28 ~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~------~---~-~~~-~~~~~~~g~~~~~~   96 (344)
                      ..+.+.++|+.+....|.. .+. +|.+++++|++++++++.++...+++      +   . +++ +......|.+....
T Consensus         6 ~~i~a~~~wg~~~~~~k~~-~~~-~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   83 (256)
T TIGR00688         6 VSLLASFLFGYMYYYSKLL-KPL-PATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLIGFN   83 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHh-ccC-CHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHHHHH
Confidence            3445667899988888874 355 99999999999999887776533221      1   1 112 12244555555555


Q ss_pred             HHHHHHhhhccchhHHHHhhcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhceeeeecccccCCCCCCchHHHHHHHH
Q 019247           97 NFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVI  176 (344)
Q Consensus        97 ~~~~~~al~~~~~~~~~~l~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l  176 (344)
                      +.+++.|++++++++++++.+++|+++++++++++|||+++++++++.++++|+.++..++    .   +..    .+++
T Consensus        84 ~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~----~---~~~----~~~l  152 (256)
T TIGR00688        84 WWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLK----G---SLP----WEAL  152 (256)
T ss_pred             HHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHc----C---Cch----HHHH
Confidence            8899999999999999999999999999999999999999999999999999998875422    1   111    3578


Q ss_pred             HhHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhh-cccccccccc-chhhHHHHHHHHHHHHHHHHHHHH
Q 019247          177 AGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTL-ELKSLESVKW-STDIILSFVGNAASSFMFYTLVPF  254 (344)
Q Consensus       177 ~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  254 (344)
                      .++++||.|.+..|+..++ +....... .+...++. .+.... +.......++ ..+.+..+.+  +.+..+|.++++
T Consensus       153 ~aa~~~a~~~i~~~~~~~~-~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~g--~~t~i~~~l~~~  227 (256)
T TIGR00688       153 VLAFSFTAYGLIRKALKNT-DLAGFCLE-TLSLMPVA-IYYLLQTDFATVQQTNPFPIWLLLVLAG--LITGTPLLAFVI  227 (256)
T ss_pred             HHHHHHHHHHHHHhhcCCC-CcchHHHH-HHHHHHHH-HHHHHHhccCcccccCchhHHHHHHHHH--HHHHHHHHHHHH
Confidence            8999999999999997543 33222221 22222222 111111 1111111111 2344444444  347789999999


Q ss_pred             HHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 019247          255 VLKLSGATMLILSVLTSDMWAVILRIFC  282 (344)
Q Consensus       255 ~l~~~~a~~~~~~~~~~p~~~~i~~~~~  282 (344)
                      ++++.++..++...+++|++++++++++
T Consensus       228 a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       228 AANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.90  E-value=9.5e-21  Score=156.95  Aligned_cols=247  Identities=16%  Similarity=0.087  Sum_probs=200.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHH-hhccccccchHHHHHHHHHHHHHHHHHHHhhhccchhHHHHhhcCchhHHHHHHHHH
Q 019247           52 APITQSVLCYLSLALAYGGILL-YRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVF  130 (344)
Q Consensus        52 ~p~~~~~~r~~~~~l~l~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~lla~l~  130 (344)
                      .|.-.++.|...++++++++.. +++|..+++|......|......|.+||.+++..|.+.+..+-++-|+..++++   
T Consensus        39 G~~g~t~lRl~~aaLIll~l~RPwr~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~~---  115 (292)
T COG5006          39 GAAGVTALRLAIAALILLALFRPWRRRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEFTGPLAVALLS---  115 (292)
T ss_pred             ChhhHHHHHHHHHHHHHHHHhhHHHhccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccHHHHHHHh---
Confidence            7899999999999999988776 455666778888889998877779999999999999999999999999987766   


Q ss_pred             hcccchHHHHHHHHHHhhhceeeeecccccCCCCCCchHHHHHHHHHhHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHH
Q 019247          131 LGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGL  210 (344)
Q Consensus       131 l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~  210 (344)
                         .-+.++.+-+.+++.|..++...+    ++...-+..|..+++.++.||++|.+..||..+..|..+.+..-+.++.
T Consensus       116 ---sRr~~d~vwvaLAvlGi~lL~p~~----~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~~g~a~gm~vAa  188 (292)
T COG5006         116 ---SRRLRDFVWVALAVLGIWLLLPLG----QSVWSLDPVGVALALGAGACWALYIVLGQRAGRAEHGTAGVAVGMLVAA  188 (292)
T ss_pred             ---ccchhhHHHHHHHHHHHHhheecc----CCcCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCCCchHHHHHHHHHH
Confidence               234556666778888888877644    2334556789999999999999999999999877777888888888888


Q ss_pred             HHHHHHHHhhccc-cccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccch
Q 019247          211 LVSVVQLSTLELK-SLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNW  289 (344)
Q Consensus       211 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~  289 (344)
                      ++. +|+...+.. .+  ..|+-....+..++ +++.+-|.+-..++++.+....+.++.+||.++.+.+++++||.+|+
T Consensus       189 viv-~Pig~~~ag~~l--~~p~ll~laLgvav-lSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~  264 (292)
T COG5006         189 LIV-LPIGAAQAGPAL--FSPSLLPLALGVAV-LSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTL  264 (292)
T ss_pred             HHH-hhhhhhhcchhh--cChHHHHHHHHHHH-HhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCH
Confidence            888 566543221 11  22233333333444 66789999999999999999999999999999999999999999999


Q ss_pred             hhHhHHHHHHHHHHhhhccccCC
Q 019247          290 TYYLAFAAVLIGLIIYSTTAKDL  312 (344)
Q Consensus       290 ~~~~G~~li~~g~~l~~~~~~~~  312 (344)
                      .||.|+..|+.+..=.+...|++
T Consensus       265 ~qwlaI~~ViaAsaG~~lt~~~~  287 (292)
T COG5006         265 IQWLAIAAVIAASAGSTLTARKP  287 (292)
T ss_pred             HHHHHHHHHHHHHhccccccCCC
Confidence            99999999999988776655443

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.88  E-value=1e-23  Score=175.64  Aligned_cols=281  Identities=16%  Similarity=0.258  Sum_probs=215.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHhhcccc---ccchHHHHHHHHHHHHHHHH
Q 019247           23 YLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRL---QVSWYWYLLLGFVDVQGNFL   99 (344)
Q Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~   99 (344)
                      +++.+..+. ..+-.+.+.+++...   .+|..+.-.|.++-.++..|...+++...   +...+++++.|+.+..+..+
T Consensus        38 ~gl~l~~vs-~ff~~~~vv~t~~~e---~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R~~LiLRg~mG~tgvml  113 (346)
T KOG4510|consen   38 LGLLLLTVS-YFFNSCMVVSTKVLE---NDPMELASFRLLVRMLITYPCLIYYMQPVIGPEGKRKWLILRGFMGFTGVML  113 (346)
T ss_pred             cCceehhhH-HHHhhHHHhhhhhhc---cChhHhhhhhhhhehhhhheEEEEEeeeeecCCCcEEEEEeehhhhhhHHHH
Confidence            344443333 444444555555543   37888889997777777777666554322   22334667788888899999


Q ss_pred             HHHhhhccchhHHHHhhcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhceeeeecccc-cCC-----CC-CCchHHHH
Q 019247          100 FNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAE-MAG-----GG-GSRPLLGD  172 (344)
Q Consensus       100 ~~~al~~~~~~~~~~l~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~-~~~-----~~-~~~~~~G~  172 (344)
                      .|+|++|.+.+++.++..++|.+|.+++|+++|||.++.+.++..+.+.||+++..+..- +++     +. ....+.|.
T Consensus       114 myya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt  193 (346)
T KOG4510|consen  114 MYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGT  193 (346)
T ss_pred             HHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCch
Confidence            999999999999999999999999999999999999999999999999999999877431 111     11 13356788


Q ss_pred             HHHHHhHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHHHHHHHH
Q 019247          173 ILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLV  252 (344)
Q Consensus       173 ~l~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (344)
                      ..++.++++-|--.++.|+..|+.|....+.+....+++..++........+++.   ...-+.+++-+++..++++.+.
T Consensus       194 ~aai~s~lf~asvyIilR~iGk~~h~~msvsyf~~i~lV~s~I~~~~ig~~~lP~---cgkdr~l~~~lGvfgfigQIll  270 (346)
T KOG4510|consen  194 VAAISSVLFGASVYIILRYIGKNAHAIMSVSYFSLITLVVSLIGCASIGAVQLPH---CGKDRWLFVNLGVFGFIGQILL  270 (346)
T ss_pred             HHHHHhHhhhhhHHHHHHHhhccccEEEEehHHHHHHHHHHHHHHhhccceecCc---cccceEEEEEehhhhhHHHHHH
Confidence            9999999999999999999999988888888888888888755544333223322   2222223323345577889999


Q ss_pred             HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhcccc
Q 019247          253 PFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAK  310 (344)
Q Consensus       253 ~~~l~~~~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  310 (344)
                      ..+++.-.+-.++++.++..+++.++.+++|||.||++.|.|.++++.+.+.....+.
T Consensus       271 Tm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~kw  328 (346)
T KOG4510|consen  271 TMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKKW  328 (346)
T ss_pred             HHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999998876554

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.86  E-value=4.2e-19  Score=158.50  Aligned_cols=267  Identities=14%  Similarity=0.049  Sum_probs=188.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHhhccccc---cchHHHHHHHHHHHHHHHHHHHhh
Q 019247           28 GQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQ---VSWYWYLLLGFVDVQGNFLFNKAF  104 (344)
Q Consensus        28 ~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~al  104 (344)
                      ..+.+.++||+.....|... +. ++.+..  |..++.+++..+....+++.+   +.+..-++.|.....++.+++.|.
T Consensus         5 ~~lia~~~wGs~g~~~k~~~-g~-~~~~~~--~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~l~G~~w~ig~~~~~~ai   80 (290)
T TIGR00776         5 IALIPALFWGSFVLINVKIG-GG-PYSQTL--GTTFGALILSIAIAIFVLPEFWALSIFLVGLLSGAFWALGQINQFKSM   80 (290)
T ss_pred             HHHHHHHHHhhhHHHHhccC-CC-HHHHHH--HHHHHHHHHHHHHHHHhCCcccccHHHHHHHHHHHHHHhhhhhHHHHH
Confidence            34455677888666666554 55 444433  676676666554433222211   111223334444555589999999


Q ss_pred             hccchhHHHHhhc-CchhHHHHHHHHHhcccchHHH----HHHHHHHhhhceeeeecccccCCCCC-CchHHHHHHHHHh
Q 019247          105 QFTSISSVTLLDC-CAIPCAIVFTWVFLGTRYSVWQ----LFGASLCVLGLGLMLLSDAEMAGGGG-SRPLLGDILVIAG  178 (344)
Q Consensus       105 ~~~~~~~~~~l~~-~~p~~~~lla~l~l~e~~~~~~----~~~~~l~~~Gv~l~~~~~~~~~~~~~-~~~~~G~~l~l~~  178 (344)
                      ++.+.+.+..+.+ +.+++..+++.+++|||.++++    ++|++++++|+.++...+.++..+++ .+...|+.+++.+
T Consensus        81 ~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~~~l~s  160 (290)
T TIGR00776        81 RYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGILLLLMS  160 (290)
T ss_pred             HHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHHHHHHH
Confidence            9999999988877 8888999999999999999999    99999999999998776531111011 3346799999999


Q ss_pred             HHHHHHHHHHHHHhhcCCChHHHHHHHH---HHHHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHHHHHHHHHHH
Q 019247          179 AIFFAMSYVGEEFLVKKIDRVEVVCMIG---VYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFV  255 (344)
Q Consensus       179 ~~~~a~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (344)
                      +++|+.|.+..|+.  +.|+.+..+.+.   +.+..+...+.  .+.   .+.. ....+.... .++....++.+|..+
T Consensus       161 g~~y~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~---~~~~-~~~~~~~~~-~Gi~~~ia~~~y~~~  231 (290)
T TIGR00776       161 TIGYLVYVVVAKAF--GVDGLSVLLPQAIGMVIGGIIFNLGH--ILA---KPLK-KYAILLNIL-PGLMWGIGNFFYLFS  231 (290)
T ss_pred             HHHHHHHHHHHHHc--CCCcceehhHHHHHHHHHHHHHHHHH--hcc---cchH-HHHHHHHHH-HHHHHHHHHHHHHHH
Confidence            99999999999976  367777744433   33333332232  110   1111 112222222 223368889999999


Q ss_pred             HH-HhhHHHHHHHHHHHHHHHHHHHHHHhccccchhhH----hHHHHHHHHHHhhhc
Q 019247          256 LK-LSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYY----LAFAAVLIGLIIYST  307 (344)
Q Consensus       256 l~-~~~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~~----~G~~li~~g~~l~~~  307 (344)
                      .+ +.++..++.+...+|+.+.+++++++||+.++.|+    +|+++++.|+.+...
T Consensus       232 ~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       232 AQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             cccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence            99 99999999999999999999999999999999999    999999999998764

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.83  E-value=7.1e-18  Score=143.78  Aligned_cols=272  Identities=15%  Similarity=0.065  Sum_probs=202.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHhh--cc---ccccchH--HHHHHHHHHH
Q 019247           22 LYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYR--RQ---RLQVSWY--WYLLLGFVDV   94 (344)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~--~~---~~~~~~~--~~~~~g~~~~   94 (344)
                      .+|++.+. .+-++||....-.++.+ .. ++.++...|..-+..+++......  ++   ...++++  ..+......+
T Consensus         6 ~~Gil~~l-~Ay~lwG~lp~y~kll~-~~-~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li   82 (293)
T COG2962           6 RKGILLAL-LAYLLWGLLPLYFKLLE-PL-PATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLI   82 (293)
T ss_pred             cchhHHHH-HHHHHHHHHHHHHHHHc-cC-CHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHH
Confidence            35666665 55678888666666664 55 788999999887777766555432  21   1122222  2233333344


Q ss_pred             HH-HHHHHHhhhccchhHHHHhhcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhceeeeecccccCCCCCCchHHHHH
Q 019247           95 QG-NFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDI  173 (344)
Q Consensus        95 ~~-~~~~~~al~~~~~~~~~~l~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~  173 (344)
                      .. .+.+..|.++..+-++++=++..|++.++++++|+|||+++.||+++.++.+||.......       ++-++.   
T Consensus        83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~-------g~lpwv---  152 (293)
T COG2962          83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL-------GSLPWV---  152 (293)
T ss_pred             HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc-------CCCcHH---
Confidence            44 4566799999999999999999999999999999999999999999999999998887733       122232   


Q ss_pred             HHHHhHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHHHHHHHHH
Q 019247          174 LVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVP  253 (344)
Q Consensus       174 l~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (344)
                       ++.=++.|++|...-|+.  +.|+.+-....+++-.+..++.....+.+.......+...+..+...+..+.+...++.
T Consensus       153 -al~la~sf~~Ygl~RK~~--~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~aG~vTavpL~lf~  229 (293)
T COG2962         153 -ALALALSFGLYGLLRKKL--KVDALTGLTLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLLVLAGLVTAVPLLLFA  229 (293)
T ss_pred             -HHHHHHHHHHHHHHHHhc--CCchHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHhhHHHHHHHHHHH
Confidence             444578999999887764  35778888888888877774443333322211111244445555566677888999999


Q ss_pred             HHHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhccc
Q 019247          254 FVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA  309 (344)
Q Consensus       254 ~~l~~~~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  309 (344)
                      .+-++.+-++.+.+.+.+|.+-.+++++++||+++..++++.++|.+|++++..+.
T Consensus       230 ~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~  285 (293)
T COG2962         230 AAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDG  285 (293)
T ss_pred             HHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999998755

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.82  E-value=1.3e-17  Score=142.18  Aligned_cols=265  Identities=15%  Similarity=0.216  Sum_probs=218.9

Q ss_pred             CChhHHHHHHHHHHHHHHHHHHHHhhc--cccccchHHHHHHHHHHHHHHHHHHHhhhccchhHHHHhhcCchhHHHHHH
Q 019247           50 VDAPITQSVLCYLSLALAYGGILLYRR--QRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFT  127 (344)
Q Consensus        50 ~~~p~~~~~~r~~~~~l~l~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~lla  127 (344)
                      +.+|..+.+...+++.++-..++-+++  ...+.+|+.+...++.+....++.|.|++|++-....+-.+.-.+-++++.
T Consensus        48 F~~~~fL~~~q~l~~~~~s~~~l~~~k~~~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg  127 (327)
T KOG1581|consen   48 FEHSLFLVFCQRLVALLVSYAMLKWWKKELSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMG  127 (327)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHhcccccCCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHH
Confidence            456899999998888887755554332  234567889999999999999999999999999999999999999999999


Q ss_pred             HHHhcccchHHHHHHHHHHhhhceeeeecccccC--CCCCCchHHHHHHHHHhHHHHHHHHHHHHHhhcCC--ChHHHHH
Q 019247          128 WVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMA--GGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKI--DRVEVVC  203 (344)
Q Consensus       128 ~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~--~~~~~~~~~G~~l~l~~~~~~a~~~v~~~~~~~~~--~~~~~~~  203 (344)
                      .++.|+|++..++....++-+|+.+....+..++  ..+..+..+|+.+....-++.++.+..+++..++.  ++...++
T Consensus       128 ~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~  207 (327)
T KOG1581|consen  128 TLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMF  207 (327)
T ss_pred             HHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHH
Confidence            9999999999999999999999999988754321  22445778999999999999999999999998865  7899999


Q ss_pred             HHHHHHHHHHHHHHHhhcccccccc---ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 019247          204 MIGVYGLLVSVVQLSTLELKSLESV---KWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRI  280 (344)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~~~~~~~~p~~~~i~~~  280 (344)
                      +..+++.+... ...+..+...+..   .-++..+.-+.....+..+++.+.++-+++.|+.+.+.++.+.-++++.++.
T Consensus       208 ~vNLf~~i~~~-~~li~qg~~~~av~F~~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~  286 (327)
T KOG1581|consen  208 GVNLFSAILNG-TYLILQGHLLPAVSFIKEHPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSC  286 (327)
T ss_pred             HHHHHHHHHHH-HhhhcCCCCchHHHHHHcChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHH
Confidence            99999999994 3344333322222   2234444445556677778899999999999999999999999999999999


Q ss_pred             HHhccccchhhHhHHHHHHHHHHhhhccccCCCCC
Q 019247          281 FCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLPI  315 (344)
Q Consensus       281 ~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~~~  315 (344)
                      +.+|.++++.||.|..+++.|+.+-...+++++.+
T Consensus       287 i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~~~~~  321 (327)
T KOG1581|consen  287 IVFGHPLSSEQWLGVLIVFGGIFLEILLKKKKNQP  321 (327)
T ss_pred             HHhCCccchhhccCeeeehHHHHHHHHHHHhccCc
Confidence            99999999999999999999999988776664333

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.82  E-value=1.6e-18  Score=151.61  Aligned_cols=226  Identities=18%  Similarity=0.260  Sum_probs=179.9

Q ss_pred             HHHHHHHHHHHHHHHHHhhhccchhHHHHhhcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhceeeeecccc-cCCCC
Q 019247           86 YLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAE-MAGGG  164 (344)
Q Consensus        86 ~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~-~~~~~  164 (344)
                      .+....+...+++.+..|++|++++..+++.+++-+||..++.++..||++..+.+++++++.|++++...+.. .+...
T Consensus       162 sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~  241 (416)
T KOG2765|consen  162 SLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLP  241 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCC
Confidence            34455666777999999999999999999999999999999999999999999999999999999999987642 12223


Q ss_pred             CCchHHHHHHHHHhHHHHHHHHHHHHHhhcCC----ChHHHHHHHHHHHHHHHHHHHHhhcc--ccccccccchh-hHHH
Q 019247          165 GSRPLLGDILVIAGAIFFAMSYVGEEFLVKKI----DRVEVVCMIGVYGLLVSVVQLSTLEL--KSLESVKWSTD-IILS  237 (344)
Q Consensus       165 ~~~~~~G~~l~l~~~~~~a~~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~  237 (344)
                      ..+...|.++++++++.||.|.++.||-..+.    |...+..+.+++..++...+..+.+.  .+..+.+-... ..+.
T Consensus       242 a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv  321 (416)
T KOG2765|consen  242 ASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVV  321 (416)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeee
Confidence            45568999999999999999999999987665    34455555666666666433333322  12222222222 2233


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhccccCC
Q 019247          238 FVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDL  312 (344)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~l~~~~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~  312 (344)
                      +.+ .++++++-++|.++.-..++.++..-+.+..+.+++.+.++-|..+++.+++|...|+.|.+..+......
T Consensus       322 ~~~-ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~~~  395 (416)
T KOG2765|consen  322 FNN-LIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSENS  395 (416)
T ss_pred             Hhh-HHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccccc
Confidence            344 47788999999999999999999999999999999999999999999999999999999999999866543

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.80  E-value=6.6e-19  Score=155.50  Aligned_cols=258  Identities=17%  Similarity=0.260  Sum_probs=211.0

Q ss_pred             CCChhHHHHHHHHHHHHHHHHHHHHhhccc-----cccchHHHHHHHHHHHHHHHHHHHhhhccchhHHHHhhcCchhHH
Q 019247           49 GVDAPITQSVLCYLSLALAYGGILLYRRQR-----LQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCA  123 (344)
Q Consensus        49 ~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~  123 (344)
                      ++..|.+++..+...+.+.+......+..+     .+..+...+.+|+....+..+.+.|+.+.+++.++.+..++|+++
T Consensus        44 ~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~t  123 (316)
T KOG1441|consen   44 GFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFT  123 (316)
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhH
Confidence            676799999998888887776665544322     234678888899998888999999999999999999999999999


Q ss_pred             HHHHHHHhcccchHHHHHHHHHHhhhceeeeecccccCCCCCCchHHHHHHHHHhHHHHHHHHHHHHHhhc--C--CChH
Q 019247          124 IVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVK--K--IDRV  199 (344)
Q Consensus       124 ~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l~~~~~~a~~~v~~~~~~~--~--~~~~  199 (344)
                      +++++++.+|+.+...+.++...+.||.+....+       ...++.|...++.+.+..++.+++.|+..+  +  .|+.
T Consensus       124 vl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e-------~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~  196 (316)
T KOG1441|consen  124 VLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTE-------LSFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSM  196 (316)
T ss_pred             HHHHHHHhCCCCcceEEEEEEEeeeeEEEeeecc-------ccccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCch
Confidence            9999999999999999999999999999988843       356689999999999999999999999984  2  3899


Q ss_pred             HHHHHHHHHHHHHHHHHHHhh-ccccc---cccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 019247          200 EVVCMIGVYGLLVSVVQLSTL-ELKSL---ESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWA  275 (344)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~~~~~~~~p~~~  275 (344)
                      +...+..-.++..+++|+... ++...   ...+|+...+. .....++.+..+...+..+.+.+|.+.++.+...-++.
T Consensus       197 ~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~-~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~v  275 (316)
T KOG1441|consen  197 NLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLI-LLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVV  275 (316)
T ss_pred             HHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHH-HHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEE
Confidence            999999999999886576544 33222   22233322222 22222556677888888999999999999999999999


Q ss_pred             HHHHHHHhccccchhhHhHHHHHHHHHHhhhccccCCCC
Q 019247          276 VILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLP  314 (344)
Q Consensus       276 ~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~~  314 (344)
                      +..++++|+++.|+.+..|.++.++|+++|++.+.++++
T Consensus       276 i~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~  314 (316)
T KOG1441|consen  276 IVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKK  314 (316)
T ss_pred             EEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhc
Confidence            999999999999999999999999999999987765443

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.76  E-value=6.7e-15  Score=129.24  Aligned_cols=256  Identities=15%  Similarity=0.160  Sum_probs=193.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhc----cc-----------cccchHHHHHHHHHHHHHHHHHHHhhhccchhHHHHhh
Q 019247           52 APITQSVLCYLSLALAYGGILLYRR----QR-----------LQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLD  116 (344)
Q Consensus        52 ~p~~~~~~r~~~~~l~l~~~~~~~~----~~-----------~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~  116 (344)
                      .|.+.+++--.+-.+++....+...    ++           .+++..+..+++++....|.++|.++.+.+++..++..
T Consensus        46 ~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~vPa~iYalqNnl~yval~~ldaatyqVt~  125 (345)
T KOG2234|consen   46 LPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSVPALIYALQNNLQYVALSNLDAATYQVTY  125 (345)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhh
Confidence            5788888877777777666665442    11           12234577788888888877999999999999999999


Q ss_pred             cCchhHHHHHHHHHhcccchHHHHHHHHHHhhhceeeeecccc---cC-CCCCCchHHHHHHHHHhHHHHHHHHHHHHHh
Q 019247          117 CCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAE---MA-GGGGSRPLLGDILVIAGAIFFAMSYVGEEFL  192 (344)
Q Consensus       117 ~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~---~~-~~~~~~~~~G~~l~l~~~~~~a~~~v~~~~~  192 (344)
                      .+..+-|++++.+++++|++++||.++.+...|+.++..+...   .. .....+...|....+.+++..++..++.+|.
T Consensus       126 qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEki  205 (345)
T KOG2234|consen  126 QLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKI  205 (345)
T ss_pred             hHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999998833321   11 2235667899999999999999999999999


Q ss_pred             hcCC--ChHHHHHHHHHHHHHHHHHHHHhhccccccc----cccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Q 019247          193 VKKI--DRVEVVCMIGVYGLLVSVVQLSTLELKSLES----VKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLIL  266 (344)
Q Consensus       193 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~~~  266 (344)
                      .|+.  +.+.......++|.++.++..+..+++....    ..|+...|...+..+++..+.-.+.    |+.+-..=+.
T Consensus       206 LK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~vw~vVl~~a~gGLlvs~v~----KyADnIlK~f  281 (345)
T KOG2234|consen  206 LKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIVWLVVLLNAVGGLLVSLVM----KYADNILKGF  281 (345)
T ss_pred             HhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHHHHHHHHHHhccchhHHHHH----HHhHHHHHHH
Confidence            9764  5666777778888888866555555443321    2356666776666655444434343    4444444444


Q ss_pred             HHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhccccC
Q 019247          267 SVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKD  311 (344)
Q Consensus       267 ~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~  311 (344)
                      ...+..+++.+.++.++|-++|....+|..+++.++.+|...+.+
T Consensus       282 ~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~  326 (345)
T KOG2234|consen  282 STSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPAR  326 (345)
T ss_pred             HHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCcc
Confidence            444577888899999999999999999999999999999955443

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.75  E-value=3.6e-16  Score=131.61  Aligned_cols=259  Identities=22%  Similarity=0.257  Sum_probs=196.2

Q ss_pred             CCChhHHHHHHHHHHHHHHHHHHHHhhccc-----------------cccchHHHHHHHHHHHHHHHHHHHhhhccchhH
Q 019247           49 GVDAPITQSVLCYLSLALAYGGILLYRRQR-----------------LQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISS  111 (344)
Q Consensus        49 ~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~-----------------~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~  111 (344)
                      ++.+|+.++..-++.-+++++.+.+.|++.                 ++-+...++..+++...+..+.|.++.+++++.
T Consensus        35 gfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lfl~Pal~Di~gsslm~vgL~lTsASs  114 (372)
T KOG3912|consen   35 GFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLFLPPALCDIAGSSLMYVGLNLTSASS  114 (372)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcceecChHHHHHhhhHHHHHHHHHhhHHH
Confidence            466799999999999988888887765431                 122345667789999999999999999999999


Q ss_pred             HHHhhcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhceeeeecccc---cCCCCCCchHHHHHHHHHhHHHHHHHHHH
Q 019247          112 VTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAE---MAGGGGSRPLLGDILVIAGAIFFAMSYVG  188 (344)
Q Consensus       112 ~~~l~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~---~~~~~~~~~~~G~~l~l~~~~~~a~~~v~  188 (344)
                      .+++.....+|+.+++..+++++++.+||.|+....+|+..+...|..   .+.++-++.+.|+++.+.+-+.-|+..++
T Consensus       115 fQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s~iitGdllIiiaqiivaiQ~v~  194 (372)
T KOG3912|consen  115 FQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYSSIITGDLLIIIAQIIVAIQMVC  194 (372)
T ss_pred             HHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCccccccchhhhHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999887543   12223356678999999999999999999


Q ss_pred             HHHhhcCC--ChHHHHHHHHHHHHHHHHHHHHhh----cccccc---ccccch------------hhHHHHHHHHHHHHH
Q 019247          189 EEFLVKKI--DRVEVVCMIGVYGLLVSVVQLSTL----ELKSLE---SVKWST------------DIILSFVGNAASSFM  247 (344)
Q Consensus       189 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~---~~~~~~------------~~~~~~~~~~~~~~~  247 (344)
                      .+|..++.  +|.+...|..++|.++..+.....    .+..++   +-.|.+            .....+.+...+-..
T Consensus       195 Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAf  274 (372)
T KOG3912|consen  195 EEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAF  274 (372)
T ss_pred             HHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhheee
Confidence            99998775  799999999999976663332211    111111   011221            222233333222222


Q ss_pred             HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhc
Q 019247          248 FYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYST  307 (344)
Q Consensus       248 ~~~~~~~~l~~~~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  307 (344)
                      ++..-...-+..++++-...-.+...+-=+++.....|.++..|+.|.++.+.|+++|+-
T Consensus       275 fNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY~~  334 (372)
T KOG3912|consen  275 FNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILYNQ  334 (372)
T ss_pred             eeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            233333445677777777777788877778888899999999999999999999999973

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.73  E-value=1.2e-15  Score=131.99  Aligned_cols=216  Identities=20%  Similarity=0.191  Sum_probs=169.0

Q ss_pred             cccchHHHHHHHHHHHHHHHHHHHhhhccchhHHHHhhcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhceeeeeccc
Q 019247           79 LQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDA  158 (344)
Q Consensus        79 ~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~  158 (344)
                      .+++..++.+++++....|.+.+.++++.+++..+++.++..++|++++++++|+|++++||+++.+.++|+.+....+.
T Consensus        13 ~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~   92 (244)
T PF04142_consen   13 SPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSS   92 (244)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCc
Confidence            34566889999999999999999999999999999999999999999999999999999999999999999999887664


Q ss_pred             ccC-C--C-------CCCchHHHHHHHHHhHHHHHHHHHHHHHhhcCC--ChHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 019247          159 EMA-G--G-------GGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKI--DRVEVVCMIGVYGLLVSVVQLSTLELKSLE  226 (344)
Q Consensus       159 ~~~-~--~-------~~~~~~~G~~l~l~~~~~~a~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (344)
                      ..+ .  +       ...+...|..+.+.++++.++..++.+|..|+.  +.+....+..++|.++.++.....++....
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~  172 (244)
T PF04142_consen   93 QSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAIS  172 (244)
T ss_pred             cccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence            321 1  1       123457899999999999999999999999886  566777777888888886554444443322


Q ss_pred             cc----ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHH
Q 019247          227 SV----KWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAV  298 (344)
Q Consensus       227 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li  298 (344)
                      +.    .++.+.|..+....+    +=.+....+|+.+...=+.......+++.+.++.++|.+++....+|..++
T Consensus       173 ~~g~f~G~~~~~~~~i~~~a~----gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V  244 (244)
T PF04142_consen  173 ESGFFHGYSWWVWIVIFLQAI----GGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV  244 (244)
T ss_pred             cCCchhhcchHHHHHHHHHHH----hhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence            21    234444443333322    222333566888877777777789999999999999999999999998653

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.71  E-value=5.5e-16  Score=127.32  Aligned_cols=258  Identities=10%  Similarity=0.111  Sum_probs=199.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhc--cccccchHHHHHHHHHHHHHHHHHHHhhhccchhHHHHhhcCchhHHHHHHHHH
Q 019247           53 PITQSVLCYLSLALAYGGILLYRR--QRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVF  130 (344)
Q Consensus        53 p~~~~~~r~~~~~l~l~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~lla~l~  130 (344)
                      ...++|+....-.++.=.+...++  +..+.+.+.+...+.....+...-+.|++|+|-....+-.+..|+-+++++.++
T Consensus        53 alaLVf~qC~~N~vfAkvl~~ir~~~~~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~  132 (337)
T KOG1580|consen   53 ALALVFFQCTANTVFAKVLFLIRKKTEIDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLF  132 (337)
T ss_pred             HHHHHHHHHHHHHHHHHhheeecccccccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhh
Confidence            445555555555444322222222  233445567777777666667777899999999999999999999999999999


Q ss_pred             hcccchHHHHHHHHHHhhhceeeeecccccCCCCCCchHHHHHHHHHhHHHHHHHHHHHHHhhcCC--ChHHHHHHHHHH
Q 019247          131 LGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKI--DRVEVVCMIGVY  208 (344)
Q Consensus       131 l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l~~~~~~a~~~v~~~~~~~~~--~~~~~~~~~~~~  208 (344)
                      .+++.+++++..++++++|+++..+.+....+..+.....|.++.+++-...++....++|.....  .....+++..+|
T Consensus       133 ~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~Nlw  212 (337)
T KOG1580|consen  133 AHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLW  212 (337)
T ss_pred             hcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHH
Confidence            999999999999999999999999875432233445667899999999999999999999886654  456788889999


Q ss_pred             HHHHHHHHHHhhcccccc--cc-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcc
Q 019247          209 GLLVSVVQLSTLELKSLE--SV-KWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQ  285 (344)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~~~~~~~~p~~~~i~~~~~~~e  285 (344)
                      +.+.+... ..+.++.+.  .. .-++..+.-+.++++++.+++.+.+..+...+|...++...+...++++.++++++.
T Consensus       213 StL~Lg~g-~lfTGElweF~yF~~RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~n  291 (337)
T KOG1580|consen  213 STLYLGAG-LLFTGELWEFFYFVQRHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNN  291 (337)
T ss_pred             HHHHhhhh-heehhhHHHHHHHHHhccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcC
Confidence            99888533 333232211  11 113344444556667788999999999999999999999999999999999999999


Q ss_pred             ccchhhHhHHHHHHHHHHhhhccccC
Q 019247          286 QVNWTYYLAFAAVLIGLIIYSTTAKD  311 (344)
Q Consensus       286 ~~~~~~~~G~~li~~g~~l~~~~~~~  311 (344)
                      +++.+||+|..+++.+...-....++
T Consensus       292 pls~rQwlgtvlVF~aL~~D~~~GK~  317 (337)
T KOG1580|consen  292 PLSGRQWLGTVLVFSALTADVVDGKK  317 (337)
T ss_pred             cCcHHHHHHHHHHHHHhhhHhhcCCc
Confidence            99999999999999999888765553

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.68  E-value=2.1e-14  Score=122.63  Aligned_cols=252  Identities=14%  Similarity=0.155  Sum_probs=182.6

Q ss_pred             CCChhHHHHHHHHHHHHHHHHHHHHhhc-c-cc---ccchHHHH----HHHHHHHHHHHHHHHhhhccchhHHHHhhcCc
Q 019247           49 GVDAPITQSVLCYLSLALAYGGILLYRR-Q-RL---QVSWYWYL----LLGFVDVQGNFLFNKAFQFTSISSVTLLDCCA  119 (344)
Q Consensus        49 ~~~~p~~~~~~r~~~~~l~l~~~~~~~~-~-~~---~~~~~~~~----~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~  119 (344)
                      .+.-|..++.++..+-.++.......++ + +.   .-.|.-++    ..|+....-..+-+.+++|++.+.+++..++.
T Consensus        41 ~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSs  120 (349)
T KOG1443|consen   41 NFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSS  120 (349)
T ss_pred             CcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccH
Confidence            4545999999998887776655443322 1 11   22443333    44443333366778999999999999999999


Q ss_pred             hhHHHHHHHHHhcccchHHHHHHHHHHhhhceeeeecccccCCCCCCchHHHHHHHHHhHHHHHHHHHHHHHhhcCC---
Q 019247          120 IPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKI---  196 (344)
Q Consensus       120 p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l~~~~~~a~~~v~~~~~~~~~---  196 (344)
                      ++|+.+++.+|.=||+++.-...+.+..+|+.++...+.       +.+..|..+..++.++-++...+.++.+++.   
T Consensus       121 i~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsT-------qf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~  193 (349)
T KOG1443|consen  121 ILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKST-------QFNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSA  193 (349)
T ss_pred             HHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEeccc-------ceeehhHHHHHHHHHhhhhhHHHHHHHHhcCccc
Confidence            999999999988899999999999999999999998542       3556899999999999999888888887765   


Q ss_pred             --ChHHHHHHHHHHHHHHHHHHHHhhcccccc-------ccccchhh--HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Q 019247          197 --DRVEVVCMIGVYGLLVSVVQLSTLELKSLE-------SVKWSTDI--ILSFVGNAASSFMFYTLVPFVLKLSGATMLI  265 (344)
Q Consensus       197 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~~  265 (344)
                        +|...++...-+....+++..+.+|+....       ..+.....  ...+.+.+...+.--.+-+..+.+.+..+.+
T Consensus       194 ~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~g~laF~l~~sEflLl~~Ts~ltlS  273 (349)
T KOG1443|consen  194 KRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLGGLLAFLLEFSEFLLLSRTSSLTLS  273 (349)
T ss_pred             cCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHheeeeccceeee
Confidence              467777776666666664556677764322       11111111  1112122222222233334557788899999


Q ss_pred             HHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhc
Q 019247          266 LSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYST  307 (344)
Q Consensus       266 ~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  307 (344)
                      +.+...-+.+.+++.++.+|.++...|.|..+...|+..+..
T Consensus       274 IaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~  315 (349)
T KOG1443|consen  274 IAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRN  315 (349)
T ss_pred             HHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhcc
Confidence            999999999999999999999999999999999999999943

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.62  E-value=2.4e-14  Score=120.13  Aligned_cols=288  Identities=16%  Similarity=0.142  Sum_probs=211.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH-Hh-hcCCC-hhHHHHHHHHHHHHHHHHHHHH-hhccccccchHHHHHHHHHHH
Q 019247           19 LRTLYLLLLGQLVSFSLALSSFTTAV-IT-DLGVD-APITQSVLCYLSLALAYGGILL-YRRQRLQVSWYWYLLLGFVDV   94 (344)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~-l~-~~~~~-~p~~~~~~r~~~~~l~l~~~~~-~~~~~~~~~~~~~~~~g~~~~   94 (344)
                      +.+|.-.+++....++.....-.... +. .+++. --+.+++.++++-..+.+..+. ++.++...+|+.+..++.+-+
T Consensus        38 kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~~k~r~iP~rtY~~la~~t~  117 (367)
T KOG1582|consen   38 KPKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQTKRRVIPWRTYVILAFLTV  117 (367)
T ss_pred             CchhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEeecccceecchhHhhhhHhhhh
Confidence            34555555555444444433333332 22 23552 1456666666555443333322 234455668899999999888


Q ss_pred             HHHHHHHHhhhccchhHHHHhhcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhceeeeecccccCCCCCCchHHHHHH
Q 019247           95 QGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDIL  174 (344)
Q Consensus        95 ~~~~~~~~al~~~~~~~~~~l~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l  174 (344)
                      +...+-.-++.|.+-..-.++.++..+-+++.+.++-++|.+..++++..+..+|.++....|.   +..++.+.+|+.+
T Consensus       118 gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs---~~sPNF~~~Gv~m  194 (367)
T KOG1582|consen  118 GTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADS---QTSPNFNLIGVMM  194 (367)
T ss_pred             hccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhccc---ccCCCcceeeHHH
Confidence            7788889999999999999999999999999999999999999999999999999999999874   4455667789999


Q ss_pred             HHHhHHHHHHHHHHHHHhhcCC--ChHHHHHHHHHHHHHHHHHHHHhhcccccccc------ccchhhHHHHHHHHHHHH
Q 019247          175 VIAGAIFFAMSYVGEEFLVKKI--DRVEVVCMIGVYGLLVSVVQLSTLELKSLESV------KWSTDIILSFVGNAASSF  246 (344)
Q Consensus       175 ~l~~~~~~a~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~  246 (344)
                      .-.+-++.|.-.-.+++.++..  +..+..++...+|.++.+.++... ++-++.+      ++....+..  .......
T Consensus       195 IsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlT-ge~f~a~~fcaehp~~tyGy~~--~~s~~gy  271 (367)
T KOG1582|consen  195 ISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLT-GELFSAWTFCAEHPVRTYGYAF--LFSLAGY  271 (367)
T ss_pred             HHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhc-ccchhhhHHHHhCcHhHHHHHH--HHHHHhH
Confidence            9999999999888888888765  567888888999999887665543 2222222      222222222  2223344


Q ss_pred             HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhccccCC
Q 019247          247 MFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDL  312 (344)
Q Consensus       247 ~~~~~~~~~l~~~~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~  312 (344)
                      ++.......++..|+.++..+......+++++++++|..++|....-|..+++.|+++...+++.+
T Consensus       272 lG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~nk  337 (367)
T KOG1582|consen  272 LGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKRNK  337 (367)
T ss_pred             hhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCCCC
Confidence            555555577889999999999999999999999999999999999999999999999998876433

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.57  E-value=1.9e-12  Score=112.25  Aligned_cols=268  Identities=13%  Similarity=0.064  Sum_probs=195.6

Q ss_pred             HHHHHHhhcCCChhHHH--HHHHHHHHHHHHHHHHHhhc---c-ccccchHHHHHHHHHHHHHHHHHHHhhhccchhHHH
Q 019247           40 FTTAVITDLGVDAPITQ--SVLCYLSLALAYGGILLYRR---Q-RLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVT  113 (344)
Q Consensus        40 ~~~~~l~~~~~~~p~~~--~~~r~~~~~l~l~~~~~~~~---~-~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~  113 (344)
                      ....|........|..+  ...+.+...+.+...-..+-   + -.++..++++...++..+..+....+++|.+.+..+
T Consensus        28 ~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t~~~slk~lnVpm~t  107 (314)
T KOG1444|consen   28 TVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLFTGSKSLKYLNVPMFT  107 (314)
T ss_pred             HHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHHHccccccccCchHHH
Confidence            34445554443334444  44777777666655443321   1 223445677778887777788888999999999999


Q ss_pred             HhhcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhceeeeecccccCCCCCCchHHHHHHHHHhHHHHHHHHHHHHHhh
Q 019247          114 LLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLV  193 (344)
Q Consensus       114 ~l~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l~~~~~~a~~~v~~~~~~  193 (344)
                      ++...+|+++++.+..++|.|++...|.++....+|.......|.       ..+..|..+++...+.-+.+.+..|+..
T Consensus       108 v~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~-------sf~~~gY~w~~~n~~~~a~~~v~~kk~v  180 (314)
T KOG1444|consen  108 VFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDL-------SFNLRGYSWALANCLTTAAFVVYVKKSV  180 (314)
T ss_pred             HHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccc-------eecchhHHHHHHHHHHHHHHHHHHHHhh
Confidence            999999999999999999999999999999999999987766542       3344599999999999999999999987


Q ss_pred             cCC--ChHHHHHHHHHHHHHHHHHHHHhhcccc-cc--ccccc-hhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Q 019247          194 KKI--DRVEVVCMIGVYGLLVSVVQLSTLELKS-LE--SVKWS-TDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILS  267 (344)
Q Consensus       194 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~~~~  267 (344)
                      +..  +.+..+++..+...+...+...+++..+ ..  ..+|. ...+..+..-++..+.-.++-..+.+..+++..++.
T Consensus       181 d~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s~~ct~~~SAtT~tiv  260 (314)
T KOG1444|consen  181 DSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGFGISYTSFLCTRVNSATTTTIV  260 (314)
T ss_pred             ccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccccceeeh
Confidence            654  5678889999998888854444443211 11  01122 222232222223344445555677888889988888


Q ss_pred             HHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhccccCCCC
Q 019247          268 VLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLP  314 (344)
Q Consensus       268 ~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~~  314 (344)
                      +..+...+.+-..+++|++.++...+|..+-+.|-++|+..++++++
T Consensus       261 G~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~  307 (314)
T KOG1444|consen  261 GAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKK  307 (314)
T ss_pred             hhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhcc
Confidence            88888888888888899999999999999999999999987754433

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.50  E-value=5.7e-13  Score=99.37  Aligned_cols=125  Identities=26%  Similarity=0.263  Sum_probs=103.4

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHhhcc--c----cccchHHHHHHHHHHHH-HHHHHH
Q 019247           29 QLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQ--R----LQVSWYWYLLLGFVDVQ-GNFLFN  101 (344)
Q Consensus        29 ~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~--~----~~~~~~~~~~~g~~~~~-~~~~~~  101 (344)
                      .+++.++|+......|+..++. +|.+.++.|..+..++++.+....++  .    .++.| .+++++.+..+ ...++|
T Consensus         8 ALLsA~fa~L~~iF~KIGl~~v-dp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~-lflilSGla~glswl~Yf   85 (140)
T COG2510           8 ALLSALFAGLTPIFAKIGLEGV-DPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSW-LFLILSGLAGGLSWLLYF   85 (140)
T ss_pred             HHHHHHHHHHHHHHHHHhcccc-CccHHHHHHHHHHHHHHHHHHHhcCceecccccCccee-hhhhHHHHHHHHHHHHHH
Confidence            3445568888888899999888 99999999999999888888775432  1    23444 44444444444 488899


Q ss_pred             HhhhccchhHHHHhhcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhceeeee
Q 019247          102 KAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLL  155 (344)
Q Consensus       102 ~al~~~~~~~~~~l~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~  155 (344)
                      +|++..+++.+.++..++|+++++++++++|||++..+|+|+.+.++|++++..
T Consensus        86 ~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          86 RALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            999999999999999999999999999999999999999999999999998764

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=99.49  E-value=8.7e-13  Score=105.84  Aligned_cols=218  Identities=17%  Similarity=0.279  Sum_probs=169.9

Q ss_pred             HHHHHHHHHHHHHHhhhccchhHHHHhhcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhceeeeecccccCCCCCCch
Q 019247           89 LGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRP  168 (344)
Q Consensus        89 ~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~  168 (344)
                      ..++....++.+..|++..+++.++.+.+..-.|+.+++++.+|+|+...++++..+++-|++++.+.|.     ...+.
T Consensus        59 F~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN-----~~a~e  133 (290)
T KOG4314|consen   59 FSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN-----EHADE  133 (290)
T ss_pred             eEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc-----hhhhh
Confidence            3455566799999999999999999999999999999999999999999999999999999999998663     34567


Q ss_pred             HHHHHHHHHhHHHHHHHHHHHHHhhcCC---ChHHHHHHHHHHHHHHHHHHHHhhccccccccc-cchhhHHHHHHHHHH
Q 019247          169 LLGDILVIAGAIFFAMSYVGEEFLVKKI---DRVEVVCMIGVYGLLVSVVQLSTLELKSLESVK-WSTDIILSFVGNAAS  244 (344)
Q Consensus       169 ~~G~~l~l~~~~~~a~~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  244 (344)
                      +.|+.++..+++..|+|.++.|+.....   |...++.-..++..++...|..+.........+ .....|..+.|...-
T Consensus       134 ~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~qsFA~~PWG~l~G~A~L  213 (290)
T KOG4314|consen  134 IIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAFTGVEHLQSFAAAPWGCLCGAAGL  213 (290)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHhchHHHHHHhhCCchhhhhHHHH
Confidence            8999999999999999999999988765   455555556666666664443322111111111 222334444444344


Q ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhccccC
Q 019247          245 SFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKD  311 (344)
Q Consensus       245 ~~~~~~~~~~~l~~~~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~  311 (344)
                      +..++...+.++....|...++-+.........++.++-+-..+.....|..+|++|.++...++.+
T Consensus       214 ~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~d~  280 (290)
T KOG4314|consen  214 SLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPEDK  280 (290)
T ss_pred             HHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheecccch
Confidence            5567888888899999999999888888888899988877778889999999999999998875543

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.48  E-value=3.5e-13  Score=100.47  Aligned_cols=135  Identities=16%  Similarity=0.136  Sum_probs=110.5

Q ss_pred             HHHHHHHhHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccc-ccccccchhhHHHHHHHHHHHHHHH
Q 019247          171 GDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKS-LESVKWSTDIILSFVGNAASSFMFY  249 (344)
Q Consensus       171 G~~l~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  249 (344)
                      ...+++++++++++..+..|--.++.||...++...+....++..........+ ..+.+...+.+..+  -++..+.++
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflil--SGla~glsw   81 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLIL--SGLAGGLSW   81 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhH--HHHHHHHHH
Confidence            468899999999999999998889899999999999888888843333322212 11233344444444  446688999


Q ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhc
Q 019247          250 TLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYST  307 (344)
Q Consensus       250 ~~~~~~l~~~~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  307 (344)
                      .+|+++++..+++.+..+.-+.|+++++++++++||++|..+++|+.+|.+|.++..+
T Consensus        82 l~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          82 LLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            9999999999999999999999999999999999999999999999999999988764

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.40  E-value=3.6e-12  Score=99.19  Aligned_cols=125  Identities=20%  Similarity=0.280  Sum_probs=102.4

Q ss_pred             HHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 019247          180 IFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLS  259 (344)
Q Consensus       180 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  259 (344)
                      ++||.+.+..|+..++.|+....++....+.+ ..+.....+..+....++..+.+..+.+. ++...++.++++++++.
T Consensus         1 ~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~   78 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGL-LGTALAYLLYFYALKYI   78 (126)
T ss_pred             ceeeeHHHHHHHHhccCCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhc-cceehHHHHHHHHHHhc
Confidence            46899999999999999999999999999987 43333333333323344445555555555 55788899999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhh
Q 019247          260 GATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYS  306 (344)
Q Consensus       260 ~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~  306 (344)
                      ++..++....++|+++.+++++++||++++.+++|+.+++.|+++..
T Consensus        79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   79 SASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999998864

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.39  E-value=1.8e-12  Score=109.41  Aligned_cols=267  Identities=12%  Similarity=0.111  Sum_probs=177.9

Q ss_pred             HHhhcCCChhHHHHHHHHHHHHHHHHHHHHh-hccccccchHHHHHHHHHHHHHHHHHHHhhhccch-hHHHHhhcCchh
Q 019247           44 VITDLGVDAPITQSVLCYLSLALAYGGILLY-RRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSI-SSVTLLDCCAIP  121 (344)
Q Consensus        44 ~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~-~~~~~l~~~~p~  121 (344)
                      .+..+.-.+--.+++..+++-++--+++.-. ...+++.+.+.+.+.-......+.+.++++++--+ ..-.++.+..++
T Consensus        24 ~L~~~~pgsgNLITFaqFlFia~eGlif~skf~~~k~kiplk~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll  103 (330)
T KOG1583|consen   24 LLVRNEPGSGNLITFAQFLFIATEGLIFTSKFFTVKPKIPLKDYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLL  103 (330)
T ss_pred             HHHHhCCCCeeehHHHHHHHHHHhceeeeccccccCCCCchhhhheehheeeeeeeeccceeeecccceEEEEEecCcHH
Confidence            4444332233556677766655544333211 11234445566666666555668888899998644 667778889999


Q ss_pred             HHHHHHHHHhcccchHHHHHHHHHHhhhceeeeecccc-cCC-----------CCCCchHHHHHHHHHhHHHHHHHHHHH
Q 019247          122 CAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAE-MAG-----------GGGSRPLLGDILVIAGAIFFAMSYVGE  189 (344)
Q Consensus       122 ~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~-~~~-----------~~~~~~~~G~~l~l~~~~~~a~~~v~~  189 (344)
                      .+++++++++|+|.+.+|+.++++..+|+++....... .+.           +.......|+.+...+-+.-|.-.+++
T Consensus       104 ~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyq  183 (330)
T KOG1583|consen  104 ANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQ  183 (330)
T ss_pred             HHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999998876432 111           111234578888888888889888888


Q ss_pred             HHhhcCC--ChHHHHHHHHHHHHHHHHHHHH--------hhcccc--ccccc-cchhhHHHHHHHHHHHHHHHHHHHHHH
Q 019247          190 EFLVKKI--DRVEVVCMIGVYGLLVSVVQLS--------TLELKS--LESVK-WSTDIILSFVGNAASSFMFYTLVPFVL  256 (344)
Q Consensus       190 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l  256 (344)
                      +...+++  ++.+.+++..+.+.+..+...-        .+..+.  .+... .-+..|..+...++..-..--..+..-
T Consensus       184 E~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~CikgVy~L~  263 (330)
T KOG1583|consen  184 ETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYFCIKGVYILT  263 (330)
T ss_pred             HHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHHHHHHHHHhhhhhh
Confidence            8887775  8899999999988887743210        010110  11111 112233333333232222111222223


Q ss_pred             HHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhcccc
Q 019247          257 KLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAK  310 (344)
Q Consensus       257 ~~~~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  310 (344)
                      ...++.++++...+...++.+++++.|+.++++..|+|..++..|.+++.....
T Consensus       264 te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~~~  317 (330)
T KOG1583|consen  264 TETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANVWN  317 (330)
T ss_pred             ceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHHHc
Confidence            345566677778899999999999999999999999999999999999985443

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=99.37  E-value=2.3e-10  Score=98.89  Aligned_cols=245  Identities=13%  Similarity=0.109  Sum_probs=169.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhccccc---cchHHHHHHHHHHHHHHHHHHHhhhccchhHHHHhh-cCchhHHHHHH
Q 019247           52 APITQSVLCYLSLALAYGGILLYRRQRLQ---VSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLD-CCAIPCAIVFT  127 (344)
Q Consensus        52 ~p~~~~~~r~~~~~l~l~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~-~~~p~~~~lla  127 (344)
                      +|..+.+.-...+.++-+.....++....   +.+...++-|++...++..++.|+++..++.+.++. ...-+.+.+++
T Consensus        11 ~~~~Q~lG~t~Gali~alv~~~~~~p~~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~g   90 (269)
T PF06800_consen   11 KPANQILGTTIGALIFALVVFLFRQPAFSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIG   90 (269)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHH
Confidence            46666655554454444444444433332   455666778888888899999999999999999885 46666699999


Q ss_pred             HHHhcccchHHHHH----HHHHHhhhceeeeecccccCCC-CCCchHHHHHHHHHhHHHHHHHHHHHHHhhcCCChHHHH
Q 019247          128 WVFLGTRYSVWQLF----GASLCVLGLGLMLLSDAEMAGG-GGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVV  202 (344)
Q Consensus       128 ~l~l~e~~~~~~~~----~~~l~~~Gv~l~~~~~~~~~~~-~~~~~~~G~~l~l~~~~~~a~~~v~~~~~~~~~~~~~~~  202 (344)
                      .++++|.-+..+++    ++++.++|+.+....+..++.. ...+...|+...+.+.+.|..|.+.-|..  +.|+.+..
T Consensus        91 v~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~--~~~~~~~~  168 (269)
T PF06800_consen   91 VLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAF--HVSGWSAF  168 (269)
T ss_pred             HhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhc--CCChhHhH
Confidence            99999988877654    7788899999998877543322 23456689999999999999999997753  45676666


Q ss_pred             HHHHHHHHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 019247          203 CMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFC  282 (344)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~~~~~~~~p~~~~i~~~~~  282 (344)
                      .-+.+ |.++..+.+.........    +...+.-++.- +.-.+++.++..+.+..+.+..=.+.-+.++++.+.+.++
T Consensus       169 lPqai-Gm~i~a~i~~~~~~~~~~----~k~~~~nil~G-~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~i  242 (269)
T PF06800_consen  169 LPQAI-GMLIGAFIFNLFSKKPFF----EKKSWKNILTG-LIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFI  242 (269)
T ss_pred             HHHHH-HHHHHHHHHhhccccccc----ccchHHhhHHH-HHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheE
Confidence            65433 333332333332221111    11112222122 3345667777788889998888888889999999999999


Q ss_pred             hccccchh----hHhHHHHHHHHHHh
Q 019247          283 YHQQVNWT----YYLAFAAVLIGLII  304 (344)
Q Consensus       283 ~~e~~~~~----~~~G~~li~~g~~l  304 (344)
                      +||+=+.+    .++|+.+++.|.++
T Consensus       243 l~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  243 LKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             EEecCchhhHHHHHHHHHHHHHhhhc
Confidence            99998865    45688888887664

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.31  E-value=8.9e-11  Score=96.17  Aligned_cols=261  Identities=11%  Similarity=0.068  Sum_probs=190.3

Q ss_pred             CCChhHHHHHHHHHHHHHHHHHHHHhhccc-cccchHHHHHHHHHHHHHHHHHHHhhhccchhHHHHhhcCchhHHHHHH
Q 019247           49 GVDAPITQSVLCYLSLALAYGGILLYRRQR-LQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFT  127 (344)
Q Consensus        49 ~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~lla  127 (344)
                      ++.--+.+.+.+.++..+-++.+-+.+-.. ..++.+.++..+++.+...+..-.+++|.+...++++.+++.+.++...
T Consensus        33 gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR~t~aK~WfpiSfLLv~MIyt~SKsLqyL~vpiYTiFKNltII~iAygE  112 (309)
T COG5070          33 GFNMNFLLLAVQSLVCVVGLLILKFLRLVEFRLTKAKKWFPISFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGE  112 (309)
T ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHhHhheehhhhhhhcCHHHHHHHHHHhcccceeeeeeeHHHHhccceeehhHhhH
Confidence            554456666777666555554443322111 1334455566777766667777899999999999999999999999999


Q ss_pred             HHHhcccchHHHHHHHHHHhhhceeeeecccccCCCCCCchHHHHHHHHHhHHHHHHHHHHHHHhhcCC--ChHHHHHHH
Q 019247          128 WVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKI--DRVEVVCMI  205 (344)
Q Consensus       128 ~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l~~~~~~a~~~v~~~~~~~~~--~~~~~~~~~  205 (344)
                      .+++|.|.+..+..+..+.++.-....+.|...........+.|.+++..-++.-+.+....|+..+-.  .....++|.
T Consensus       113 vl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYn  192 (309)
T COG5070         113 VLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYN  192 (309)
T ss_pred             HHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccCCceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHh
Confidence            999999999999999999988887777765321111112345799999999999999999998877654  467889999


Q ss_pred             HHHHHHHHHHHHHhhccccccc----cccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 019247          206 GVYGLLVSVVQLSTLELKSLES----VKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIF  281 (344)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~~~~~~~~p~~~~i~~~~  281 (344)
                      .+.+.+++...-..+|..+...    .+.+...+..+-++  +++.--++-.+.++..+++..++.+.++..-..+.|.+
T Consensus       193 NllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl--~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlv  270 (309)
T COG5070         193 NLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGL--CSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLV  270 (309)
T ss_pred             hhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHH--HHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhh
Confidence            9999999865555555433221    12223233333333  33333344457789999999999999999999999999


Q ss_pred             HhccccchhhHhHHHHHHHHHHhhhccccC
Q 019247          282 CYHQQVNWTYYLAFAAVLIGLIIYSTTAKD  311 (344)
Q Consensus       282 ~~~e~~~~~~~~G~~li~~g~~l~~~~~~~  311 (344)
                      +++|+.+...+..+.+-..+.++|...+++
T Consensus       271 ffdap~nf~si~sillGflsg~iYavaks~  300 (309)
T COG5070         271 FFDAPVNFLSIFSILLGFLSGAIYAVAKSK  300 (309)
T ss_pred             hcCCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999888888888776543

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.31  E-value=5.6e-13  Score=112.24  Aligned_cols=258  Identities=15%  Similarity=0.149  Sum_probs=191.0

Q ss_pred             CChhHHHHHHHHHHHHHHHHHHHHhhcc--------cccc---chHHHHHHHHHHHHHHHHHHHhhhccchhHHHHhhcC
Q 019247           50 VDAPITQSVLCYLSLALAYGGILLYRRQ--------RLQV---SWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCC  118 (344)
Q Consensus        50 ~~~p~~~~~~r~~~~~l~l~~~~~~~~~--------~~~~---~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~  118 (344)
                      ...|..+++...++...+...+.....+        +.+-   ..+...-+.++.+....+-++.++|++++.+.+=.++
T Consensus        58 Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsL  137 (347)
T KOG1442|consen   58 LDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFILMISFNNLCLKYVGVAFYYVGRSL  137 (347)
T ss_pred             cCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheeeeehhccceehhhcceEEEEeccch
Confidence            3459999999998888777666542211        1111   1234445555555556667799999999999999999


Q ss_pred             chhHHHHHHHHHhcccchHHHHHHHHHHhhhceeeeecccccCCCCCCchHHHHHHHHHhHHHHHHHHHHHHHhhcCC--
Q 019247          119 AIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKI--  196 (344)
Q Consensus       119 ~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l~~~~~~a~~~v~~~~~~~~~--  196 (344)
                      ..+|+.+++++++|+|-+..-..+..+.+.|-.+=.-.+    +..+.-.+.|++++..+.++-|+..+..||.....  
T Consensus       138 ttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE----~~~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~  213 (347)
T KOG1442|consen  138 TTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQE----GSTGTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGD  213 (347)
T ss_pred             hhhHHHHhHHhhcccccccccceeehhheehheeccccc----cccCccchhhhHHHHHHHHHHHHHHHhhheecccccC
Confidence            999999999999999999999999999999987644432    23345567999999999999999999999876654  


Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHhhcccc--ccc--cccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 019247          197 DRVEVVCMIGVYGLLVSVVQLSTLELKS--LES--VKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSD  272 (344)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~~~~~~~~p  272 (344)
                      .-+.++++....+.++. +|.....++-  ...  ..|....|......+++.+...+...+=+|..+|.+..+.....-
T Consensus       214 ~iw~lt~ynnv~a~lLf-lpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyvTg~QIK~TSplThnISgTAka  292 (347)
T KOG1442|consen  214 CIWRLTAYNNVNALLLF-LPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKA  292 (347)
T ss_pred             eehhhHHHHHHHHHHHH-HHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhheeeEEEEecccceeeecHhHHH
Confidence            35789999999998888 5766655421  111  223445555443333333332323223356778888888888888


Q ss_pred             HHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhccccCC
Q 019247          273 MWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDL  312 (344)
Q Consensus       273 ~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~  312 (344)
                      ....+++..+++|.-+..-|.|-.+++.|...|++.++.+
T Consensus       293 ~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~e  332 (347)
T KOG1442|consen  293 AAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHE  332 (347)
T ss_pred             HHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHH
Confidence            9999999999999999999999999999999999876543

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.25  E-value=1.9e-11  Score=95.03  Aligned_cols=118  Identities=23%  Similarity=0.359  Sum_probs=94.4

Q ss_pred             HHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHhhc-----cccccchHHHHHHHHHH-HHHHHHHHHhhhccc
Q 019247           35 LALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRR-----QRLQVSWYWYLLLGFVD-VQGNFLFNKAFQFTS  108 (344)
Q Consensus        35 ~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~-----~~~~~~~~~~~~~g~~~-~~~~~~~~~al~~~~  108 (344)
                      +|+......|...++. +|...+++|+..+.+ ++++....+     +...+++......+.+. ...+.+++.++++.+
T Consensus         2 ~~a~~~~~~k~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~   79 (126)
T PF00892_consen    2 SWAIYSVFSKKLLKKI-SPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYIS   79 (126)
T ss_pred             eeeeHHHHHHHHhccC-CHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcc
Confidence            4666666666666566 999999999999997 444443322     22234556667777774 455889999999999


Q ss_pred             hhHHHHhhcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhceeee
Q 019247          109 ISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLML  154 (344)
Q Consensus       109 ~~~~~~l~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~  154 (344)
                      ++.++++.++.|+++.+++++++||++++++++|+.+++.|+.++.
T Consensus        80 ~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   80 ASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999997653

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.23  E-value=5e-11  Score=91.14  Aligned_cols=100  Identities=24%  Similarity=0.404  Sum_probs=82.8

Q ss_pred             HHHHHHHHHHHHHHHHhhccc-------cccchHHHHHHHHHHH-HHHHHHHHhhhccchhHHHHhhcCchhHHHHHHHH
Q 019247           58 VLCYLSLALAYGGILLYRRQR-------LQVSWYWYLLLGFVDV-QGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWV  129 (344)
Q Consensus        58 ~~r~~~~~l~l~~~~~~~~~~-------~~~~~~~~~~~g~~~~-~~~~~~~~al~~~~~~~~~~l~~~~p~~~~lla~l  129 (344)
                      .+|+..+.+++..+...+++.       .++++.+....|.++. ..+.+++.|+++.+ +.++++.+++|+++++++++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            578888888888777654321       2344556666677776 55888999999999 58889999999999999999


Q ss_pred             HhcccchHHHHHHHHHHhhhceeeeeccc
Q 019247          130 FLGTRYSVWQLFGASLCVLGLGLMLLSDA  158 (344)
Q Consensus       130 ~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~  158 (344)
                      ++|||++++++.++.++++|+.++..++.
T Consensus        81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~  109 (113)
T PF13536_consen   81 FFKERLSPRRWLAILLILIGVILIAWSDL  109 (113)
T ss_pred             HhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence            99999999999999999999999998764

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.23  E-value=4.8e-10  Score=90.60  Aligned_cols=137  Identities=17%  Similarity=0.247  Sum_probs=111.1

Q ss_pred             HHHHHHHhHHHHHHHHHHHHHhhcC-----C--ChHHHHHHHHHHHHHHHHHHHHhhcccccccc----cc-----chhh
Q 019247          171 GDILVIAGAIFFAMSYVGEEFLVKK-----I--DRVEVVCMIGVYGLLVSVVQLSTLELKSLESV----KW-----STDI  234 (344)
Q Consensus       171 G~~l~l~~~~~~a~~~v~~~~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-----~~~~  234 (344)
                      |..+++.+.++.|++.++.|+..++     .  ++.+...+....+.++..+.....|.......    ..     ....
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            6788999999999999999998766     2  78999999999999999666666665432111    11     2233


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhc
Q 019247          235 ILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYST  307 (344)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  307 (344)
                      +..+...++.....+...+..+++.+|...++....+.+..++.+++++||+++..+++|.++.+.|.++|++
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            3344444455667788888999999999999999999999999999999999999999999999999999864

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=99.14  E-value=2e-09  Score=96.03  Aligned_cols=212  Identities=13%  Similarity=0.191  Sum_probs=124.4

Q ss_pred             HHHHHHHHhhhccchhHHHHhhcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhceeeeecccccCCCCCCchH-----
Q 019247           95 QGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPL-----  169 (344)
Q Consensus        95 ~~~~~~~~al~~~~~~~~~~l~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~-----  169 (344)
                      .+..+.+.|+.+.|++..+++.....++.++++..++|||++++++.|+.++++|..++.......++..+.+..     
T Consensus        62 ~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~~~l~~~~~  141 (300)
T PF05653_consen   62 LGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHTLDELIALLS  141 (300)
T ss_pred             cchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCCHHHHHHHhc
Confidence            347788899999999999999999999999999999999999999999999999998877654221111111111     


Q ss_pred             -HHH-HH-HHHhHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHH----HHHH---hhccccccccccchhhHHHHH
Q 019247          170 -LGD-IL-VIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSV----VQLS---TLELKSLESVKWSTDIILSFV  239 (344)
Q Consensus       170 -~G~-~l-~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~---~~~~~~~~~~~~~~~~~~~~~  239 (344)
                       .+. .+ .+...+...+.....+|..++ +..........+|..-..    +...   ..++++.  . .++..|..+.
T Consensus       142 ~~~fl~y~~~~~~~~~~L~~~~~~r~g~~-~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~~~--f-~~~~~y~l~~  217 (300)
T PF05653_consen  142 QPGFLVYFILVLVLILILIFFIKPRYGRR-NILVYISICSLIGSFTVLSAKAISILIKLTFSGDNQ--F-TYPLTYLLLL  217 (300)
T ss_pred             CcceehhHHHHHHHHHHHHHhhcchhccc-ceEEEEEEeccccchhhhHHHHHHHHHHHHhcCchh--h-hhhHHHHHHH
Confidence             010 11 111111222222222222221 221111111222221110    0011   1112111  1 1333444455


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHhccccc--h----hhHhHHHHHHHHHHhhhcccc
Q 019247          240 GNAASSFMFYTLVPFVLKLSGATMLILSVL-TSDMWAVILRIFCYHQQVN--W----TYYLAFAAVLIGLIIYSTTAK  310 (344)
Q Consensus       240 ~~~~~~~~~~~~~~~~l~~~~a~~~~~~~~-~~p~~~~i~~~~~~~e~~~--~----~~~~G~~li~~g~~l~~~~~~  310 (344)
                      ....+........++++++.++..+..+.+ .-...+++-+.++++|.-+  .    ....|+.+++.|+++.+..++
T Consensus       218 ~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~lL~~~~~  295 (300)
T PF05653_consen  218 VLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFLLSSSKD  295 (300)
T ss_pred             HHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhheeeccCc
Confidence            554555566666678999999877765554 4455677777888888654  3    467888999999999875443

>TIGR00803 nst UDP-galactose transporter

Probab=99.13  E-value=3.1e-09  Score=91.42  Aligned_cols=189  Identities=12%  Similarity=0.118  Sum_probs=114.5

Q ss_pred             HHHhhcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhce--------------------eeeecccccCCCCCCchHHH
Q 019247          112 VTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLG--------------------LMLLSDAEMAGGGGSRPLLG  171 (344)
Q Consensus       112 ~~~l~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~--------------------l~~~~~~~~~~~~~~~~~~G  171 (344)
                      .....+..++++++..+.+.+||++..++++.++...|+.                    .....+...+.....+...|
T Consensus         7 ~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g~~~~g   86 (222)
T TIGR00803         7 HIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFGNPVVG   86 (222)
T ss_pred             hHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccccHHHH
Confidence            3444455555555555555555555555555555555554                    33221110001122356788


Q ss_pred             HHHHHHhHHHHHHHHHHHHHhhcCCChH--HHHHHHHHHHHHHHHHHHHhhcc-cccccc----ccchhhHHHHHHHHHH
Q 019247          172 DILVIAGAIFFAMSYVGEEFLVKKIDRV--EVVCMIGVYGLLVSVVQLSTLEL-KSLESV----KWSTDIILSFVGNAAS  244 (344)
Q Consensus       172 ~~l~l~~~~~~a~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~  244 (344)
                      ....+.+.++.++..++.++..++.+..  .......+++.+... ....... ......    .++...+...    +.
T Consensus        87 ~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~  161 (222)
T TIGR00803        87 LSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTF-SVLLWSDGTLISNFGFFIGYPTAVWIVG----LL  161 (222)
T ss_pred             HHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHH-HHHhhcccchhhccCcccCCchHHHHHH----HH
Confidence            8888889999999999999987654321  112222233333221 1111111 111111    1122222221    33


Q ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhh
Q 019247          245 SFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIY  305 (344)
Q Consensus       245 ~~~~~~~~~~~l~~~~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~  305 (344)
                      ......+....+++.++...+....++++++.+++++++||+++..+++|..+++.|+.+|
T Consensus       162 ~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       162 NVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             HHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            4455667778899999999999999999999999999999999999999999999998764

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.06  E-value=8.8e-09  Score=92.60  Aligned_cols=137  Identities=11%  Similarity=0.136  Sum_probs=106.4

Q ss_pred             chHHHHHHHHHhHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccc--cccccccchhhHHH-HHHHHH
Q 019247          167 RPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELK--SLESVKWSTDIILS-FVGNAA  243 (344)
Q Consensus       167 ~~~~G~~l~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~  243 (344)
                      +...|+.+.+++++.|+...+..|.. .+.++.+..+++.+++.++.. +.....++  .......+...+.. ..+. +
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~~~~~~~~R~~~a~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~   81 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYVPADEILTHRVIWSFFFMV-VLMSICRQWSYLKTLIQTPQKIFMLAVSA-V   81 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHH-HHHHHHccHHHHHHHHcCHHHHHHHHHHH-H
Confidence            45689999999999999999999764 567999999999999988773 33322211  11000001112122 2333 5


Q ss_pred             HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhh
Q 019247          244 SSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYS  306 (344)
Q Consensus       244 ~~~~~~~~~~~~l~~~~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~  306 (344)
                      +.+..+.++++++++.++..+++..++.|++..+++++++||+++.++++|.++.++|+++..
T Consensus        82 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         82 LIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            566789999999999999999999999999999999999999999999999999999999875

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.05  E-value=8.7e-09  Score=91.97  Aligned_cols=131  Identities=9%  Similarity=0.039  Sum_probs=96.2

Q ss_pred             HHHHHHhHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhc--cccccccccchhhHHHHHHHHHHHHHHH
Q 019247          172 DILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLE--LKSLESVKWSTDIILSFVGNAASSFMFY  249 (344)
Q Consensus       172 ~~l~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (344)
                      ..+.+.+++++|..++..|+..++.++.+  .+....+.+.. .|.....  .......+...  +......+.+....+
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~~~~~--~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~   77 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKEPDFL--WWALLAHSVLL-TPYGLWYLAQVGWSRLPATF--WLLLAISAVANMVYF   77 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCchhHHH--HHHHHHHHHHH-HHHHHHhcccCCCCCcchhh--HHHHHHHHHHHHHHH
Confidence            46789999999999999998877655533  44444554444 3444332  12222211122  222222335566788


Q ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhc
Q 019247          250 TLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYST  307 (344)
Q Consensus       250 ~~~~~~l~~~~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  307 (344)
                      .++.+++++.++..++.+.++.|+++.+++++++||+++.++++|..+++.|+++...
T Consensus        78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~  135 (281)
T TIGR03340        78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL  135 (281)
T ss_pred             HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence            8889999999999999999999999999999999999999999999999999998764

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>TIGR00688 rarD rarD protein

Probab=99.02  E-value=1.8e-08  Score=88.67  Aligned_cols=136  Identities=13%  Similarity=0.194  Sum_probs=103.6

Q ss_pred             HHHHHHHHhHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcc-c----cccccccchhhHHHHHHHHHH
Q 019247          170 LGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLEL-K----SLESVKWSTDIILSFVGNAAS  244 (344)
Q Consensus       170 ~G~~l~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~  244 (344)
                      .|..+.++++++|+...+..|. ..+.|+.+..++.++++.++..+....... .    .....+... .+......++.
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LKPLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRP-LILSLLLCGLL   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccch-HHHHHHHHHHH
Confidence            3789999999999999999997 456899999999999998776332222221 1    111111111 12222222233


Q ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhc
Q 019247          245 SFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYST  307 (344)
Q Consensus       245 ~~~~~~~~~~~l~~~~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  307 (344)
                      ....+.+++.++++.++..++.+.++.|+++++++++++||+++.++++|..+.++|+++...
T Consensus        80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~  142 (256)
T TIGR00688        80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIV  142 (256)
T ss_pred             HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence            567788999999999999999999999999999999999999999999999999999987743

This uncharacterized protein is predicted to have many membrane-spanning domains.

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.02  E-value=1.1e-08  Score=90.25  Aligned_cols=130  Identities=22%  Similarity=0.241  Sum_probs=95.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHhhcccc---ccchHHHHHHHHHHHH-HH
Q 019247           22 LYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRL---QVSWYWYLLLGFVDVQ-GN   97 (344)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~---~~~~~~~~~~g~~~~~-~~   97 (344)
                      .++...+.+.+++........++..++...++.....+++..+.+++.++....++..   .+++...+..+.++.. +.
T Consensus       127 ~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (260)
T TIGR00950       127 PAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQALSLQWGALLYLGLIGTALAY  206 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHH
Confidence            4566666655555555555555555432223555666788888888888776543222   2233445666766544 48


Q ss_pred             HHHHHhhhccchhHHHHhhcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhce
Q 019247           98 FLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLG  151 (344)
Q Consensus        98 ~~~~~al~~~~~~~~~~l~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~  151 (344)
                      .+++.++++.+++.++.+.++.|+++++++++++||+++..+++|..+.+.|+.
T Consensus       207 ~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~  260 (260)
T TIGR00950       207 FLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence            889999999999999999999999999999999999999999999999999873

>PRK13499 rhamnose-proton symporter; Provisional

Probab=98.93  E-value=9.1e-07  Score=79.78  Aligned_cols=227  Identities=11%  Similarity=0.093  Sum_probs=139.3

Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHhhhccchhHHHHh-hcCchhHHHHHHHHHhcccc-------hHHHHHHHHHHhhhce
Q 019247           80 QVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLL-DCCAIPCAIVFTWVFLGTRY-------SVWQLFGASLCVLGLG  151 (344)
Q Consensus        80 ~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l-~~~~p~~~~lla~l~l~e~~-------~~~~~~~~~l~~~Gv~  151 (344)
                      ...+...++.|.+...++.+++.++++...+.+..+ ..+.-+...++..++++|-.       .....+|++++++|++
T Consensus        70 ~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~  149 (345)
T PRK13499         70 GSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVA  149 (345)
T ss_pred             HHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHH
Confidence            344556667778888889999999999999988777 66888889999998988644       2346788999999999


Q ss_pred             eeee----cccccCC--CCCCchHHHHHHHHHhHHHHHHHH-------HHHHHhhc-CCChHHHHHHHH---HHHHHHHH
Q 019247          152 LMLL----SDAEMAG--GGGSRPLLGDILVIAGAIFFAMSY-------VGEEFLVK-KIDRVEVVCMIG---VYGLLVSV  214 (344)
Q Consensus       152 l~~~----~~~~~~~--~~~~~~~~G~~l~l~~~~~~a~~~-------v~~~~~~~-~~~~~~~~~~~~---~~~~~~~~  214 (344)
                      +...    .+...+.  +.+.+...|+.+++++.+.++.|+       ...+.... +.|+......+.   +++..+.-
T Consensus       150 l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n  229 (345)
T PRK13499        150 IVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITN  229 (345)
T ss_pred             HHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHH
Confidence            9988    4321111  233566799999999999999999       44433211 223332222222   23333332


Q ss_pred             HHHHhh---ccccc---cccc------cchhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH-H---HHHHHHHHHHHHH
Q 019247          215 VQLSTL---ELKSL---ESVK------WSTDIILSFVGNAASSFMFYTLVPFVLKLSGATML-I---LSVLTSDMWAVIL  278 (344)
Q Consensus       215 ~~~~~~---~~~~~---~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~-~---~~~~~~p~~~~i~  278 (344)
                      ..+...   ..+..   .+..      +.......+.|  +.-..++..+..+-...+.... .   +.+.+..+++.++
T Consensus       230 ~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G--~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Viistlw  307 (345)
T PRK13499        230 LGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAG--VMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLW  307 (345)
T ss_pred             HHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHH--HHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHh
Confidence            222221   11111   1111      11111112222  2223444444444454432222 1   3335677899999


Q ss_pred             HHHHhccccc------hhhHhHHHHHHHHHHhhhccc
Q 019247          279 RIFCYHQQVN------WTYYLAFAAVLIGLIIYSTTA  309 (344)
Q Consensus       279 ~~~~~~e~~~------~~~~~G~~li~~g~~l~~~~~  309 (344)
                      +.+ +||.=+      ...++|++++++|..+....+
T Consensus       308 Gi~-lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~~  343 (345)
T PRK13499        308 GLV-LKEWKGASRRPVRVLSLGCVVIILAANIVGLGN  343 (345)
T ss_pred             hhh-hhhccCCCccchhHHHHHHHHHHHHHHHHhhcc
Confidence            995 899866      567999999999999887643

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.88  E-value=1.4e-07  Score=73.21  Aligned_cols=122  Identities=7%  Similarity=0.060  Sum_probs=89.2

Q ss_pred             HHHHHHHHhHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHHHHH
Q 019247          170 LGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFY  249 (344)
Q Consensus       170 ~G~~l~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (344)
                      .|.++.+.+.++-+...++.|+-.++.+..+.... . .  . . +. ...          ++ ....+.++ ++.+.++
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~-~-~--~-~-~~-~~~----------~p-~~~i~lgl-~~~~la~   62 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHAWD-F-I--A-A-LL-AFG----------LA-LRAVLLGL-AGYALSM   62 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccchhH-H-H--H-H-HH-HHh----------cc-HHHHHHHH-HHHHHHH
Confidence            47788999999999999999998876543332211 0 0  0 0 00 000          11 11233344 5677889


Q ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH--HhccccchhhHhHHHHHHHHHHhhhcccc
Q 019247          250 TLVPFVLKLSGATMLILSVLTSDMWAVILRIF--CYHQQVNWTYYLAFAAVLIGLIIYSTTAK  310 (344)
Q Consensus       250 ~~~~~~l~~~~a~~~~~~~~~~p~~~~i~~~~--~~~e~~~~~~~~G~~li~~g~~l~~~~~~  310 (344)
                      .+|.+++++.+...+..+....++...+.++.  ++||++|+.+++|.++|++|+++.++.++
T Consensus        63 ~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~  125 (129)
T PRK02971         63 LCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT  125 (129)
T ss_pred             HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence            99999999999999999888888878777774  89999999999999999999999976444

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=98.85  E-value=5.8e-08  Score=84.50  Aligned_cols=219  Identities=12%  Similarity=0.137  Sum_probs=134.6

Q ss_pred             HHHHHHHHHHHH-HHHHHHhhhccchhHHHHhhcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhceeeeecccccCCC
Q 019247           85 WYLLLGFVDVQG-NFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGG  163 (344)
Q Consensus        85 ~~~~~g~~~~~~-~~~~~~al~~~~~~~~~~l~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~  163 (344)
                      +.++.|++-... ....|.|+.|.|++..+++-+++.+..++++..++|||++....+|++++++|-.+++......++-
T Consensus        65 ~~Ww~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i  144 (335)
T KOG2922|consen   65 PLWWAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEI  144 (335)
T ss_pred             HHHHHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCccccc
Confidence            344456554444 8888999999999999999999999999999999999999999999999999999988865321111


Q ss_pred             CC----------CchHHHHHHHHHhHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHH----HHHHH---hhc-cccc
Q 019247          164 GG----------SRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVS----VVQLS---TLE-LKSL  225 (344)
Q Consensus       164 ~~----------~~~~~G~~l~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~---~~~-~~~~  225 (344)
                      .+          ..+..-..+.   .....+-....|+.-...+.........+.|.+-.    .+...   .+. ..+.
T Consensus       145 ~t~~el~~~~~~~~Fliy~~~i---il~~~il~~~~~p~~g~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~~ql  221 (335)
T KOG2922|consen  145 ESVEEVWELATEPGFLVYVIII---ILIVLILIFFYAPRYGQTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGNNQL  221 (335)
T ss_pred             ccHHHHHHHhcCccHHHHHHHH---HHHHHHHheeecccccccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCCccc
Confidence            11          1111111111   11111111222211112244555554444443222    01111   111 1111


Q ss_pred             cccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHhccccc------hhhHhHHHHH
Q 019247          226 ESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVL-TSDMWAVILRIFCYHQQVN------WTYYLAFAAV  298 (344)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~~~~~~-~~p~~~~i~~~~~~~e~~~------~~~~~G~~li  298 (344)
                      .    .+..|..+.....+......-.+++++..++..++.+.+ .-..++++-+.++|+|.-.      ..+..|+..+
T Consensus       222 ~----~~~ty~~~l~~~~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti  297 (335)
T KOG2922|consen  222 F----YPLTWIFLLVVATCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTI  297 (335)
T ss_pred             c----cHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHh
Confidence            1    223444444443444444455578889888888887665 5566778888899988754      2578899999


Q ss_pred             HHHHHhhhcccc
Q 019247          299 LIGLIIYSTTAK  310 (344)
Q Consensus       299 ~~g~~l~~~~~~  310 (344)
                      +.|+.+....+.
T Consensus       298 ~~G~flL~~~kd  309 (335)
T KOG2922|consen  298 FLGIFLLHRTKD  309 (335)
T ss_pred             hheeeEeeeecc
Confidence            999999865443

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.76  E-value=3.8e-07  Score=83.72  Aligned_cols=136  Identities=12%  Similarity=0.008  Sum_probs=106.4

Q ss_pred             HHHHHHHHhHHHHHHHHHHHHHhhcCC-ChHHHHHHHHHHHHHHHHHHHHhh-cc-ccccccccchhhHHHHHHHHHHHH
Q 019247          170 LGDILVIAGAIFFAMSYVGEEFLVKKI-DRVEVVCMIGVYGLLVSVVQLSTL-EL-KSLESVKWSTDIILSFVGNAASSF  246 (344)
Q Consensus       170 ~G~~l~l~~~~~~a~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~  246 (344)
                      .-.+.+++.-++|+.+.++.|...+.. ++....++...++.+++. ++... +. ...+..+|..+....+.+. ++ .
T Consensus        13 ~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll-~~~~~~~~~~~~~~~~~~~~~~l~l~g~-~g-~   89 (358)
T PLN00411         13 VFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLL-PSLFFTNRSRSLPPLSVSILSKIGLLGF-LG-S   89 (358)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHH-HHHHHHHHhcccCcchHHHHHHHHHHHH-HH-H
Confidence            345667888899999999999998765 899999999999988873 44432 22 1222223444444555554 32 4


Q ss_pred             HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH------hccccchhhHhHHHHHHHHHHhhhcc
Q 019247          247 MFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFC------YHQQVNWTYYLAFAAVLIGLIIYSTT  308 (344)
Q Consensus       247 ~~~~~~~~~l~~~~a~~~~~~~~~~p~~~~i~~~~~------~~e~~~~~~~~G~~li~~g~~l~~~~  308 (344)
                      ..+.+++.++++.++..++++.++.|+++.++++++      ++|+++..+++|.++.++|+.+....
T Consensus        90 ~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~  157 (358)
T PLN00411         90 MYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFY  157 (358)
T ss_pred             HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHc
Confidence            566788899999999999999999999999999999      69999999999999999999987753

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.64  E-value=7.9e-07  Score=79.86  Aligned_cols=132  Identities=14%  Similarity=-0.030  Sum_probs=91.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHhhccccccc---hHHHHHHHHHHHHH-HH
Q 019247           23 YLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVS---WYWYLLLGFVDVQG-NF   98 (344)
Q Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~---~~~~~~~g~~~~~~-~~   98 (344)
                      .+.+++...+++........++..+ .. +|...... ..++.+++.++..........+   +...+.+|++.... +.
T Consensus       148 ~G~ll~l~aa~~~a~~~v~~r~~~~-~~-~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~lgv~~t~~~~~  224 (293)
T PRK10532        148 TGAALALGAGACWAIYILSGQRAGA-EH-GPATVAIG-SLIAALIFVPIGALQAGEALWHWSILPLGLAVAILSTALPYS  224 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc-cC-CchHHHHH-HHHHHHHHHHHHHHccCcccCCHHHHHHHHHHHHHHHHHHHH
Confidence            4666666555444444444445533 33 55555444 4555666666655432211112   22335667666555 67


Q ss_pred             HHHHhhhccchhHHHHhhcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhceeeeecc
Q 019247           99 LFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSD  157 (344)
Q Consensus        99 ~~~~al~~~~~~~~~~l~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~  157 (344)
                      ++++++++.+++.++++.+++|+++.++++++++|+++..+++|..+.+.|++......
T Consensus       225 l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~  283 (293)
T PRK10532        225 LEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTI  283 (293)
T ss_pred             HHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence            88999999999999999999999999999999999999999999999999998876543

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.63  E-value=2.3e-06  Score=76.87  Aligned_cols=132  Identities=11%  Similarity=0.057  Sum_probs=100.3

Q ss_pred             HHHHHHhHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHHHHHHH
Q 019247          172 DILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTL  251 (344)
Q Consensus       172 ~~l~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (344)
                      .+..++-.+.|+...+..|...++.||....++...++.++.. +....+....  .+...+......+. +....++.+
T Consensus        10 ~~~~~~~~~iWg~~~~~~K~~~~~~~p~~~~~~R~~~a~l~ll-~~~~~~~~~~--~~~~~~~~~~~~g~-~~~~~~~~~   85 (292)
T PRK11272         10 FGALFALYIIWGSTYLVIRIGVESWPPLMMAGVRFLIAGILLL-AFLLLRGHPL--PTLRQWLNAALIGL-LLLAVGNGM   85 (292)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHhccCCHHHHHHHHHHHHHHHHH-HHHHHhCCCC--CcHHHHHHHHHHHH-HHHHHHHHH
Confidence            4556777899999999999888888999999999999988874 4443333221  11223333333444 323345667


Q ss_pred             HHHHH-HHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhcc
Q 019247          252 VPFVL-KLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTT  308 (344)
Q Consensus       252 ~~~~l-~~~~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~  308 (344)
                      ++.+. +..++..++++..+.|+++.+++.+ +||+++.++++|..+.++|+.+....
T Consensus        86 ~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~  142 (292)
T PRK11272         86 VTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSG  142 (292)
T ss_pred             HHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcC
Confidence            77777 8889999999999999999999985 79999999999999999999888643

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.61  E-value=1.1e-06  Score=67.00  Aligned_cols=78  Identities=18%  Similarity=0.259  Sum_probs=64.5

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhcccc
Q 019247          231 STDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAK  310 (344)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  310 (344)
                      ..+.+....+. ++....+.++.++.++.++ .+..+..+.|+++.+++.++++|+++..+++|.+++.+|+++....+.
T Consensus        32 ~~~~~~~~~g~-~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~  109 (113)
T PF13536_consen   32 KPWLWLILAGL-LGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDL  109 (113)
T ss_pred             CcHHHHHHHHH-HHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence            33344444444 4445779999999999995 777889999999999999999999999999999999999999987543

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.60  E-value=1.3e-06  Score=75.31  Aligned_cols=141  Identities=11%  Similarity=0.127  Sum_probs=110.8

Q ss_pred             hHHHHHHHHHhHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcc-ccccccccchhhHHHHHHHHHHHH
Q 019247          168 PLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLEL-KSLESVKWSTDIILSFVGNAASSF  246 (344)
Q Consensus       168 ~~~G~~l~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  246 (344)
                      ...|+++++.+-+.|+..-.+.|. .+..++.+...+..+++.++..+......+ .+..+...++..+..+...++-..
T Consensus         5 ~~~Gil~~l~Ay~lwG~lp~y~kl-l~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~   83 (293)
T COG2962           5 SRKGILLALLAYLLWGLLPLYFKL-LEPLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIG   83 (293)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHH-HccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHH
Confidence            346999999999999999999865 566799999999999999999554443322 222222223334444433434455


Q ss_pred             HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhccc
Q 019247          247 MFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA  309 (344)
Q Consensus       247 ~~~~~~~~~l~~~~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  309 (344)
                      .-+..+.++.++.....++.-.+++|++.+++|.++++|+++..|++...+..+|+.......
T Consensus        84 ~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~  146 (293)
T COG2962          84 LNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL  146 (293)
T ss_pred             HHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence            667888899999999999999999999999999999999999999999999999999887543

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.58  E-value=2e-06  Score=77.30  Aligned_cols=131  Identities=11%  Similarity=0.068  Sum_probs=96.2

Q ss_pred             HHHHHHHHhHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHHHHH
Q 019247          170 LGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFY  249 (344)
Q Consensus       170 ~G~~l~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (344)
                      .+.++++.++++|+...+..|...+..+|....++....+.++.. +...  .+...+   ..+... ..+. +.....+
T Consensus         4 ~~~l~~l~a~~~Wg~~~~~~k~~~~~~~P~~~~~~R~~~a~l~l~-~~~~--~~~~~~---~~~~~~-~~~~-l~~~~~~   75 (295)
T PRK11689          4 KATLIGLIAILLWSTMVGLIRGVSESLGPVGGAAMIYSVSGLLLL-LTVG--FPRLRQ---FPKRYL-LAGG-LLFVSYE   75 (295)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHH-HHcc--cccccc---ccHHHH-HHHh-HHHHHHH
Confidence            457789999999999999999998889999999999988887773 3321  111111   111111 1122 2233444


Q ss_pred             HHHHHHHH----HhhHHHHHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhcc
Q 019247          250 TLVPFVLK----LSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTT  308 (344)
Q Consensus       250 ~~~~~~l~----~~~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~  308 (344)
                      .+.+.+.+    ..++..++.+..+.|+++.++++++++|+++..+++|+.+.++|+++....
T Consensus        76 ~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~  138 (295)
T PRK11689         76 ICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGG  138 (295)
T ss_pred             HHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecC
Confidence            44444544    456777889999999999999999999999999999999999999888743

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.54  E-value=5.8e-06  Score=74.50  Aligned_cols=125  Identities=10%  Similarity=0.191  Sum_probs=93.1

Q ss_pred             HHHHHhHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHHHHHHHH
Q 019247          173 ILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLV  252 (344)
Q Consensus       173 ~l~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (344)
                      .+.++++++|+...+..|...++.||....++...++.+... +....     .+.++   ......+. ......+.++
T Consensus         7 l~~l~~~~~Wg~~~~~~k~~~~~~~p~~~~~~R~~~a~~~l~-~~~~~-----~~~~~---~~~~~~g~-~~~~~~~~~~   76 (299)
T PRK11453          7 VLALLVVVVWGLNFVVIKVGLHNMPPLMLAGLRFMLVAFPAI-FFVAR-----PKVPL---NLLLGYGL-TISFGQFAFL   76 (299)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHhcCCHHHHHHHHHHHHHHHHH-HHhcC-----CCCch---HHHHHHHH-HHHHHHHHHH
Confidence            567889999999999999988888999999999988766552 32211     11111   11111222 1123334455


Q ss_pred             HHHHHH-hhHHHHHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhc
Q 019247          253 PFVLKL-SGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYST  307 (344)
Q Consensus       253 ~~~l~~-~~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  307 (344)
                      +.+.++ .++..++++..+.|+++.++++++++|+++.++++|.++.++|+.+...
T Consensus        77 ~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~  132 (299)
T PRK11453         77 FCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIE  132 (299)
T ss_pred             HHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhcc
Confidence            567776 5778888889999999999999999999999999999999999988874

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.53  E-value=7.5e-06  Score=75.32  Aligned_cols=138  Identities=11%  Similarity=0.148  Sum_probs=97.0

Q ss_pred             HHHHHHHHHhHHHHHHHHHHHHHhhcCCC-hHHHHHHHHHHHHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHHH
Q 019247          169 LLGDILVIAGAIFFAMSYVGEEFLVKKID-RVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFM  247 (344)
Q Consensus       169 ~~G~~l~l~~~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (344)
                      ..-..+.+.--.+...++...|...+..+ |..+..++.+++.++.. ..+.......++.+.....+..++..+++...
T Consensus        48 ~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~~  126 (350)
T PTZ00343         48 WKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFAL-LYWATGFRKIPRIKSLKLFLKNFLPQGLCHLF  126 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHH-HHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence            33344444444555667788888888888 99999999999987663 33332211111121011122222233333344


Q ss_pred             HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhc
Q 019247          248 FYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYST  307 (344)
Q Consensus       248 ~~~~~~~~l~~~~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  307 (344)
                      .+...+.+++..+++.++++..++|++++++++++++|+++.+++.|.+++++|+.+...
T Consensus       127 ~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~  186 (350)
T PTZ00343        127 VHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASV  186 (350)
T ss_pred             HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheec
Confidence            466667889999999999999999999999999999999999999999999999998864

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.49  E-value=8.7e-06  Score=61.62  Aligned_cols=65  Identities=15%  Similarity=0.194  Sum_probs=59.9

Q ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhc
Q 019247          243 ASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYST  307 (344)
Q Consensus       243 ~~~~~~~~~~~~~l~~~~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  307 (344)
                      .+.+.++.++..++++.+..++-.+..+.++.+.+++++++||++++.+++|.+++++|+++...
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~  109 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS  109 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            44667899999999999999999999999999999999999999999999999999999988764

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=98.43  E-value=3.3e-08  Score=82.64  Aligned_cols=268  Identities=12%  Similarity=0.071  Sum_probs=164.2

Q ss_pred             HHHHHHHHHHHHH-HHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHhhcccc-ccchHHHHHHHHHHHHHHHHHHHh
Q 019247           26 LLGQLVSFSLALS-SFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRL-QVSWYWYLLLGFVDVQGNFLFNKA  103 (344)
Q Consensus        26 ~~~~~~~~~~~~~-~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~a  103 (344)
                      +++++= .+.||+ .....|...    .|.+++....+.+.++...+.+...+.. .+.+..-++-|.+...++...+.|
T Consensus         5 liaL~P-~l~WGsip~v~~k~GG----~p~qQ~lGtT~GALifaiiv~~~~~p~~T~~~~iv~~isG~~Ws~GQ~~Qfka   79 (288)
T COG4975           5 LIALLP-ALGWGSIPLVANKFGG----KPYQQTLGTTLGALIFAIIVFLFVSPELTLTIFIVGFISGAFWSFGQANQFKA   79 (288)
T ss_pred             HHHHHH-HHHhcccceeeeecCC----ChhHhhhhccHHHHHHHHHHheeecCccchhhHHHHHHhhhHhhhhhhhhhhh
Confidence            344433 345555 343334442    6777776665555555444444322222 223334455666677778899999


Q ss_pred             hhccchhHHHHhhc-CchhHHHHHHHHHhcccchHHHH----HHHHHHhhhceeeeecccc-cCCCCCCchHHHHHHHHH
Q 019247          104 FQFTSISSVTLLDC-CAIPCAIVFTWVFLGTRYSVWQL----FGASLCVLGLGLMLLSDAE-MAGGGGSRPLLGDILVIA  177 (344)
Q Consensus       104 l~~~~~~~~~~l~~-~~p~~~~lla~l~l~e~~~~~~~----~~~~l~~~Gv~l~~~~~~~-~~~~~~~~~~~G~~l~l~  177 (344)
                      +++..++.+.++.. ..-+-+.+++.+.++|..+..+.    +++++.+.|+.+-...+.+ ++.+..++.-.|+...+.
T Consensus        80 ~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~~~~n~kkgi~~L~i  159 (288)
T COG4975          80 IQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEENPSNLKKGIVILLI  159 (288)
T ss_pred             eeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccccccChHhhhhheeeeee
Confidence            99999999999855 45555889999999999888764    5677888999999888753 233344556689999999


Q ss_pred             hHHHHHHHHHHHHHhhcCC-ChHHHHHHHHHHHHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 019247          178 GAIFFAMSYVGEEFLVKKI-DRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVL  256 (344)
Q Consensus       178 ~~~~~a~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  256 (344)
                      |.+.|-.|.++.+...-+. +..--.+    .|.++.++.+..... +   ...+-..|.-.+ .++.-..++..+..+.
T Consensus       160 St~GYv~yvvl~~~f~v~g~saiLPqA----iGMv~~ali~~~~~~-~---~~~~K~t~~nii-~G~~Wa~GNl~ml~a~  230 (288)
T COG4975         160 STLGYVGYVVLFQLFDVDGLSAILPQA----IGMVIGALILGFFKM-E---KRFNKYTWLNII-PGLIWAIGNLFMLLAA  230 (288)
T ss_pred             eccceeeeEeeeccccccchhhhhHHH----HHHHHHHHHHhhccc-c---cchHHHHHHHHh-hHHHHHhhHHHHHHhh
Confidence            9999999999987654221 3333333    333333223222211 1   111111222111 1122334556655666


Q ss_pred             HHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhh----HhHHHHHHHHHHhhhc
Q 019247          257 KLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTY----YLAFAAVLIGLIIYST  307 (344)
Q Consensus       257 ~~~~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~----~~G~~li~~g~~l~~~  307 (344)
                      +..+.++.=.+.-+..+++.+=++++++|+=|..+    ++|..+++.|..+...
T Consensus       231 ~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg~  285 (288)
T COG4975         231 QKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLGI  285 (288)
T ss_pred             hhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhhe
Confidence            66664444344446678888999999999998865    4677788877776543

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.39  E-value=1.8e-05  Score=71.35  Aligned_cols=122  Identities=12%  Similarity=-0.004  Sum_probs=89.6

Q ss_pred             HHHHHHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 019247          182 FAMSYVGEEFLVKK-IDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSG  260 (344)
Q Consensus       182 ~a~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  260 (344)
                      ...++++.|...++ ..|....+++...+.+... +..........+.+.+++......+.  .....+.+.+.++++.+
T Consensus        14 ~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~l~~~s   90 (302)
T TIGR00817        14 NVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCL-LSWSSGLPKRLKISSALLKLLLPVAI--VHTIGHVTSNVSLSKVA   90 (302)
T ss_pred             HHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHH-HHHHhCCCCCCCCCHHHHHHHHHHHH--HHHHHHHHHHHHHHhcc
Confidence            33455677888876 4688888888888776653 33211111112233334444444444  34666788999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhh
Q 019247          261 ATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYS  306 (344)
Q Consensus       261 a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~  306 (344)
                      +...+++..+.|+++.++++++++|+++..++.|..++++|+.+..
T Consensus        91 ~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~  136 (302)
T TIGR00817        91 VSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS  136 (302)
T ss_pred             HHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc
Confidence            9999999999999999999999999999999999999999998764

specificities overlap.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.39  E-value=4e-06  Score=63.46  Aligned_cols=64  Identities=8%  Similarity=-0.034  Sum_probs=57.0

Q ss_pred             HHHHH-HHHHHHhhhccchhHHHHhhcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhceeeee
Q 019247           92 VDVQG-NFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLL  155 (344)
Q Consensus        92 ~~~~~-~~~~~~al~~~~~~~~~~l~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~  155 (344)
                      +..+. ..+...+++..|.+.+..+.++.++++.+++++++|||++.+|++|+.+.+.|++++..
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~  109 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS  109 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            44444 66778999999999999999999999999999999999999999999999999987654

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.37  E-value=1.7e-05  Score=63.77  Aligned_cols=129  Identities=15%  Similarity=0.109  Sum_probs=97.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhc-----CCChhHHHHHHHHHHHHHHHHHHHHhhccc----------------cccch
Q 019247           25 LLLGQLVSFSLALSSFTTAVITDL-----GVDAPITQSVLCYLSLALAYGGILLYRRQR----------------LQVSW   83 (344)
Q Consensus        25 ~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~----------------~~~~~   83 (344)
                      .+++....++...-+...++...+     ...+|..+.......+.+.+.+.....++.                ....+
T Consensus         2 ~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~   81 (153)
T PF03151_consen    2 FILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFI   81 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHH
Confidence            344554555555555566665555     344799999999999998888876642211                11223


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhccchhHHHHhhcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhceee
Q 019247           84 YWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLM  153 (344)
Q Consensus        84 ~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~  153 (344)
                      ...+..|+++...+...+..++++++...+++.....+.+.++++++++|+++..+++|+.+++.|+.+-
T Consensus        82 ~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Y  151 (153)
T PF03151_consen   82 FLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLY  151 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhee
Confidence            3444555666666999999999999999999999999999999999999999999999999999998764

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.26  E-value=8.8e-06  Score=72.88  Aligned_cols=128  Identities=13%  Similarity=0.111  Sum_probs=91.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHH---H-HHHHHHHHHHHhhccc-cccchHHHHHHHHHHHHH
Q 019247           22 LYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCY---L-SLALAYGGILLYRRQR-LQVSWYWYLLLGFVDVQG   96 (344)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~r~---~-~~~l~l~~~~~~~~~~-~~~~~~~~~~~g~~~~~~   96 (344)
                      .++++.+++.+++.+......+..   +. +|.+.++...   . .+.++..++  .+.++ ..+..+..++.|++...+
T Consensus       151 ~~Gi~~~l~sg~~y~~~~~~~~~~---~~-~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~Gi~~~ia  224 (290)
T TIGR00776       151 KKGILLLLMSTIGYLVYVVVAKAF---GV-DGLSVLLPQAIGMVIGGIIFNLGH--ILAKPLKKYAILLNILPGLMWGIG  224 (290)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHc---CC-CcceehhHHHHHHHHHHHHHHHHH--hcccchHHHHHHHHHHHHHHHHHH
Confidence            568999988887776665555543   23 6676644443   3 333333333  11111 222334455577776555


Q ss_pred             HHHHHHhhh-ccchhHHHHhhcCchhHHHHHHHHHhcccchHHHH----HHHHHHhhhceeeee
Q 019247           97 NFLFNKAFQ-FTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQL----FGASLCVLGLGLMLL  155 (344)
Q Consensus        97 ~~~~~~al~-~~~~~~~~~l~~~~p~~~~lla~l~l~e~~~~~~~----~~~~l~~~Gv~l~~~  155 (344)
                      +.+++.+.+ +.+++.+.++.+..|+...+++.+++||+.+++++    +|.++.+.|+.+...
T Consensus       225 ~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       225 NFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             HHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence            888889999 99999999999999999999999999999999999    999999999887643

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.23  E-value=0.00012  Score=65.33  Aligned_cols=141  Identities=14%  Similarity=0.203  Sum_probs=101.4

Q ss_pred             hHHHHHHHHHhHHHHHHHHHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHH
Q 019247          168 PLLGDILVIAGAIFFAMSYVGEEFLVKK-IDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSF  246 (344)
Q Consensus       168 ~~~G~~l~l~~~~~~a~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (344)
                      ...+....+..++.|+......|+..++ .+.....+.....+.+.. .+....+........ ....+..+.+. +...
T Consensus         5 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~   81 (292)
T COG0697           5 LLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLL-LPLLLLEPRGLRPAL-RPWLLLLLLAL-LGLA   81 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHH-HHHHHhhcccccccc-cchHHHHHHHH-HHHH
Confidence            3467788888889999999999888776 345555555666666553 333332211111111 11222333333 6677


Q ss_pred             HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH-HHhccccchhhHhHHHHHHHHHHhhhccccC
Q 019247          247 MFYTLVPFVLKLSGATMLILSVLTSDMWAVILRI-FCYHQQVNWTYYLAFAAVLIGLIIYSTTAKD  311 (344)
Q Consensus       247 ~~~~~~~~~l~~~~a~~~~~~~~~~p~~~~i~~~-~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~  311 (344)
                      ..+.++..++++.++..+..+..+.|++..+++. ++++|+++..++.|..+.+.|+++.......
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~  147 (292)
T COG0697          82 LPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGG  147 (292)
T ss_pred             HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCc
Confidence            8888999999999999999999999999999997 6679999999999999999999999875543

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=98.04  E-value=8e-05  Score=56.76  Aligned_cols=68  Identities=6%  Similarity=0.205  Sum_probs=55.0

Q ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHH-HHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhcccc
Q 019247          243 ASSFMFYTLVPFVLKLSGATMLILS-VLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAK  310 (344)
Q Consensus       243 ~~~~~~~~~~~~~l~~~~a~~~~~~-~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  310 (344)
                      ++...++.++..++++.+...+=.+ .-+..+...+++++++||++++.+++|..+|++|++..+...+
T Consensus        38 ~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~  106 (120)
T PRK10452         38 VMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTR  106 (120)
T ss_pred             HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCC
Confidence            4455678888889988885554433 3467788899999999999999999999999999999876553

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=98.00  E-value=0.00036  Score=63.14  Aligned_cols=139  Identities=14%  Similarity=0.033  Sum_probs=89.3

Q ss_pred             HHHHHHHHHhHHHHHHHHHHHHHhhcC-C-ChHHHHHHHHHHHHHHHHHHHHhhcccc--ccccccchhhHHHHHHHHHH
Q 019247          169 LLGDILVIAGAIFFAMSYVGEEFLVKK-I-DRVEVVCMIGVYGLLVSVVQLSTLELKS--LESVKWSTDIILSFVGNAAS  244 (344)
Q Consensus       169 ~~G~~l~l~~~~~~a~~~v~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  244 (344)
                      +.+.+++-.-+++-+..++.+....++ . -|....++..+.-.++.. +........  .....  ...|.-++..++.
T Consensus        12 ~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~-~~~~~r~~~~~~~~~~--~~~~w~y~lla~~   88 (334)
T PF06027_consen   12 WIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYT-PILLYRRGFKKWLKVL--KRPWWKYFLLALL   88 (334)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHh-hhhhhccccccchhhc--chhHHHHHHHHHH
Confidence            334444444444444444444444333 2 255555554444444332 333222211  11111  1122222233456


Q ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhcccc
Q 019247          245 SFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAK  310 (344)
Q Consensus       245 ~~~~~~~~~~~l~~~~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  310 (344)
                      -..++.++..+.++.+.+.+.++.....++++++++++++|+.++.+++|+.+.++|+.+......
T Consensus        89 Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~  154 (334)
T PF06027_consen   89 DVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDV  154 (334)
T ss_pred             HHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecc
Confidence            778899999999999999999999999999999999999999999999999999999998876543

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.89  E-value=4.2e-05  Score=59.40  Aligned_cols=72  Identities=18%  Similarity=0.271  Sum_probs=61.3

Q ss_pred             HHHHHHHHHHH-HHHHHHhhhccchhHHHHhhcCchhHHHHHHHH--HhcccchHHHHHHHHHHhhhceeeeecc
Q 019247           86 YLLLGFVDVQG-NFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWV--FLGTRYSVWQLFGASLCVLGLGLMLLSD  157 (344)
Q Consensus        86 ~~~~g~~~~~~-~~~~~~al~~~~~~~~~~l~~~~p~~~~lla~l--~l~e~~~~~~~~~~~l~~~Gv~l~~~~~  157 (344)
                      ++..|+...+. ..++..+++..+.+.+..+.+..+..+.+.++.  ++||+++..+++|+.+.++|+.++..++
T Consensus        50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~  124 (129)
T PRK02971         50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT  124 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence            55666665555 778889999999999999998888888888874  8999999999999999999999987643

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.85  E-value=0.00096  Score=60.21  Aligned_cols=129  Identities=13%  Similarity=0.114  Sum_probs=90.7

Q ss_pred             HHHHHHHHHHHhhcCC--C--hHHHHHHHHHHHHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 019247          181 FFAMSYVGEEFLVKKI--D--RVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVL  256 (344)
Q Consensus       181 ~~a~~~v~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  256 (344)
                      ++..+.+.+++..++.  +  +..+++.+.....+...+.......+..+..++..     +...++....+..+-+.++
T Consensus        11 ~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~al   85 (303)
T PF08449_consen   11 GCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPKSRKIPLKK-----YAILSFLFFLASVLSNAAL   85 (303)
T ss_pred             HHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccCCCcChHHH-----HHHHHHHHHHHHHHHHHHH
Confidence            3445667888887664  3  55667777777776663332222212222222111     1222344556677788999


Q ss_pred             HHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhccccCCCC
Q 019247          257 KLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLP  314 (344)
Q Consensus       257 ~~~~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~~  314 (344)
                      ++.+.....+.-...|+..++++++++|++.+..++.+..++.+|+++....+.++.+
T Consensus        86 ~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~  143 (303)
T PF08449_consen   86 KYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSS  143 (303)
T ss_pred             HhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccc
Confidence            9999999999999999999999999999999999999999999999999876654433

; GO: 0055085 transmembrane transport

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.78  E-value=0.00042  Score=52.10  Aligned_cols=67  Identities=7%  Similarity=0.051  Sum_probs=53.0

Q ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHH-HHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhccc
Q 019247          243 ASSFMFYTLVPFVLKLSGATMLILS-VLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA  309 (344)
Q Consensus       243 ~~~~~~~~~~~~~l~~~~a~~~~~~-~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  309 (344)
                      ++.+.++.++..++++.+...+=.. .-+..+...++++++|||++++.+++|..+|++|++..+...
T Consensus        38 ~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            4455567777788888775544333 336778889999999999999999999999999999997654

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.69  E-value=0.003  Score=49.75  Aligned_cols=131  Identities=14%  Similarity=0.174  Sum_probs=89.1

Q ss_pred             HHHHHHHhHHHHHHHHHHHHHhhcCC-ChHHHHHHHHHHHHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHHHHH
Q 019247          171 GDILVIAGAIFFAMSYVGEEFLVKKI-DRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFY  249 (344)
Q Consensus       171 G~~l~l~~~~~~a~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (344)
                      ..++++.+..+-++......+..++. |+....+.....|.++..+.....+..+....+  ...|..+.+-.+ .....
T Consensus         2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~--~~p~w~~lGG~l-G~~~V   78 (138)
T PF04657_consen    2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSLASLS--SVPWWAYLGGLL-GVFFV   78 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhc--cCChHHhccHHH-HHHHH
Confidence            35678888888899888888887776 499999999999999886555555443332222  222222223313 33445


Q ss_pred             HHHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHH----HhccccchhhHhHHHHHHHHHHh
Q 019247          250 TLVPFVLKLSGATMLILSVL-TSDMWAVILRIF----CYHQQVNWTYYLAFAAVLIGLII  304 (344)
Q Consensus       250 ~~~~~~l~~~~a~~~~~~~~-~~p~~~~i~~~~----~~~e~~~~~~~~G~~li~~g~~l  304 (344)
                      .+.....++.++........ -+.+.+.+++.+    .-++++++.+.+|..++++|+++
T Consensus        79 ~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   79 LSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            55556778888776665444 456667777775    33577899999999999999864

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.69  E-value=0.00034  Score=62.74  Aligned_cols=122  Identities=13%  Similarity=0.118  Sum_probs=86.1

Q ss_pred             CchHHHHHHHHHhHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccccccccccchhhHHHHHHHHHHH
Q 019247          166 SRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASS  245 (344)
Q Consensus       166 ~~~~~G~~l~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (344)
                      .+..+|+.+++.++++.+....++|+...+.+....-.                  .....+.-.+..+|....    ..
T Consensus         3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~------------------~~~~~~~l~~~~W~~G~~----~~   60 (300)
T PF05653_consen    3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRA------------------GSGGRSYLRRPLWWIGLL----LM   60 (300)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc------------------cchhhHHHhhHHHHHHHH----HH
Confidence            45678999999999999999999999765532200000                  000000000112222221    23


Q ss_pred             HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhccc
Q 019247          246 FMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA  309 (344)
Q Consensus       246 ~~~~~~~~~~l~~~~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  309 (344)
                      ..+..+...++...+++.++.+..+..+++.+++..++||+++..++.|+.+++.|..+.....
T Consensus        61 ~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~  124 (300)
T PF05653_consen   61 VLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFA  124 (300)
T ss_pred             hcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeC
Confidence            3445566678889999999999999999999999999999999999999999999998776433

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=97.69  E-value=0.00094  Score=56.70  Aligned_cols=104  Identities=14%  Similarity=-0.041  Sum_probs=79.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhccccccch---HHHHHHHHHHHHH-HHHHHHhhhccchhHHHHhhcCchhHHHHHH
Q 019247           52 APITQSVLCYLSLALAYGGILLYRRQRLQVSW---YWYLLLGFVDVQG-NFLFNKAFQFTSISSVTLLDCCAIPCAIVFT  127 (344)
Q Consensus        52 ~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~---~~~~~~g~~~~~~-~~~~~~al~~~~~~~~~~l~~~~p~~~~lla  127 (344)
                      +--.-+...+.+++++.+|+-..+-.+.-.++   ..-+..+++.... +.+-..+++..|....+++.++.|.+.++.+
T Consensus       175 ~g~~g~a~gm~vAaviv~Pig~~~ag~~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G  254 (292)
T COG5006         175 HGTAGVAVGMLVAALIVLPIGAAQAGPALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSG  254 (292)
T ss_pred             CCchHHHHHHHHHHHHHhhhhhhhcchhhcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHH
Confidence            44455667788888888888774433322222   2333455555555 5566799999999999999999999999999


Q ss_pred             HHHhcccchHHHHHHHHHHhhhceeeee
Q 019247          128 WVFLGTRYSVWQLFGASLCVLGLGLMLL  155 (344)
Q Consensus       128 ~l~l~e~~~~~~~~~~~l~~~Gv~l~~~  155 (344)
                      +++++|++|..||.++...+.+..-...
T Consensus       255 ~i~L~e~ls~~qwlaI~~ViaAsaG~~l  282 (292)
T COG5006         255 LIFLGETLTLIQWLAIAAVIAASAGSTL  282 (292)
T ss_pred             HHHhcCCCCHHHHHHHHHHHHHHhcccc
Confidence            9999999999999999999888765544

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.62  E-value=0.00075  Score=58.80  Aligned_cols=126  Identities=13%  Similarity=0.098  Sum_probs=81.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHH---HHHHHHHHHHHHHHHhhccccccchHHHHHHHHHHHHH
Q 019247           20 RTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSV---LCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQG   96 (344)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~---~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~   96 (344)
                      +..+++..-++.++..|.-....+...   . +|.+..+   ..++++++++..+.  +++..+++.++-++-|++...+
T Consensus       135 ~~~kgi~~Ll~stigy~~Y~~~~~~~~---~-~~~~~~lPqaiGm~i~a~i~~~~~--~~~~~~k~~~~nil~G~~w~ig  208 (269)
T PF06800_consen  135 NMKKGILALLISTIGYWIYSVIPKAFH---V-SGWSAFLPQAIGMLIGAFIFNLFS--KKPFFEKKSWKNILTGLIWGIG  208 (269)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhcC---C-ChhHhHHHHHHHHHHHHHHHhhcc--cccccccchHHhhHHHHHHHHH
Confidence            344456655555555555544433322   2 4444333   22333333332222  3333344456677888988889


Q ss_pred             HHHHHHhhhccchhHHHHhhcCchhHHHHHHHHHhcccchHHHHH----HHHHHhhhce
Q 019247           97 NFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLF----GASLCVLGLG  151 (344)
Q Consensus        97 ~~~~~~al~~~~~~~~~~l~~~~p~~~~lla~l~l~e~~~~~~~~----~~~l~~~Gv~  151 (344)
                      +.+++.|.+....+.+-.+..+.++...+.+.+++||+-+++++.    |+.+.++|.+
T Consensus       209 nl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i  267 (269)
T PF06800_consen  209 NLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI  267 (269)
T ss_pred             HHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence            999999999999999999999999999999999999999988764    4445555554

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.61  E-value=0.0012  Score=49.53  Aligned_cols=72  Identities=15%  Similarity=0.214  Sum_probs=55.8

Q ss_pred             chHHHHHHHHHHHHHHHHHHHhhhccchhHH-HHhhcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhceee
Q 019247           82 SWYWYLLLGFVDVQGNFLFNKAFQFTSISSV-TLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLM  153 (344)
Q Consensus        82 ~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~-~~l~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~  153 (344)
                      ++......-.......++...++++.|.+.+ ++-...-.+.+.+.+.+++||++++.+++++.+.+.|++.+
T Consensus        34 ~~~~~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         34 RKIYGILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            3333333333333447778899999999666 55566788889999999999999999999999999999765

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.56  E-value=0.00089  Score=49.38  Aligned_cols=62  Identities=16%  Similarity=0.230  Sum_probs=52.9

Q ss_pred             HHHHHHHHHhhhccchhHH-HHhhcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhceeeee
Q 019247           94 VQGNFLFNKAFQFTSISSV-TLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLL  155 (344)
Q Consensus        94 ~~~~~~~~~al~~~~~~~~-~~l~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~  155 (344)
                      .....++-.|+++.|.+.+ ++-...-.+.+++.+++++||+++..+++++.+.++|++.+-.
T Consensus        41 ~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          41 GLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL  103 (106)
T ss_pred             HHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence            3347778899999999655 5667788888999999999999999999999999999987643

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.55  E-value=0.0049  Score=46.15  Aligned_cols=64  Identities=11%  Similarity=0.113  Sum_probs=51.2

Q ss_pred             HHHHHHHHHHHHHHHHhhHHHH-HHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhh
Q 019247          243 ASSFMFYTLVPFVLKLSGATML-ILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYS  306 (344)
Q Consensus       243 ~~~~~~~~~~~~~l~~~~a~~~-~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~  306 (344)
                      .+...++.+...++|+.+..++ ++-.-+..+.+.+.+++++||++++.+++|..+|+.|++..+
T Consensus        43 ~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         43 AAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            4455667788888888774443 344446778889999999999999999999999999999874

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.52  E-value=0.0074  Score=47.62  Aligned_cols=138  Identities=12%  Similarity=0.095  Sum_probs=85.1

Q ss_pred             HHHHHHHHHhHHHHHHHHHHHHHhhcCC-ChHHHHHHHHHHHHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHHH
Q 019247          169 LLGDILVIAGAIFFAMSYVGEEFLVKKI-DRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFM  247 (344)
Q Consensus       169 ~~G~~l~l~~~~~~a~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (344)
                      ....++.+.+..+-.+..-..-+..+.. +|....+.....|.+++.+.....+.........+...|..+-|. ++...
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~-lGa~~   82 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGL-LGAIF   82 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccc-hhhhh
Confidence            4567788888888888887777776665 588888888888888875555544433322222233333333332 32222


Q ss_pred             HHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHhc----cccchhhHhHHHHHHHHHHhhhcc
Q 019247          248 FYTLVPFVLKLSG-ATMLILSVLTSDMWAVILRIFCYH----QQVNWTYYLAFAAVLIGLIIYSTT  308 (344)
Q Consensus       248 ~~~~~~~~l~~~~-a~~~~~~~~~~p~~~~i~~~~~~~----e~~~~~~~~G~~li~~g~~l~~~~  308 (344)
                      -+ .-.....+.+ +........-+.+.+.+++-+=+.    .+++...++|.+++++|+++.+.+
T Consensus        83 vt-~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~  147 (150)
T COG3238          83 VT-SSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRF  147 (150)
T ss_pred             hh-hhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhccc
Confidence            12 2223334444 444445555667778888876554    668999999999999996665543

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.52  E-value=0.0013  Score=48.56  Aligned_cols=67  Identities=12%  Similarity=0.142  Sum_probs=53.3

Q ss_pred             HHHHHHHHHHHHHHHHhhHHH-HHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhccc
Q 019247          243 ASSFMFYTLVPFVLKLSGATM-LILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA  309 (344)
Q Consensus       243 ~~~~~~~~~~~~~l~~~~a~~-~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  309 (344)
                      ++...+|.+...++|..+..+ .++-.-+..+.+.+.++++|||+++..+++|..++++|++..+...
T Consensus        38 v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~s  105 (106)
T COG2076          38 VGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLGS  105 (106)
T ss_pred             HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhcC
Confidence            445556777778888877443 3444446788899999999999999999999999999999887543

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.49  E-value=0.0018  Score=48.23  Aligned_cols=66  Identities=14%  Similarity=0.118  Sum_probs=52.5

Q ss_pred             HHHHHHHHHHHHHHHHhhHHH-HHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhcc
Q 019247          243 ASSFMFYTLVPFVLKLSGATM-LILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTT  308 (344)
Q Consensus       243 ~~~~~~~~~~~~~l~~~~a~~-~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~  308 (344)
                      .+...++.+...++|..+..+ .++-.-+..+.+.+.++++|||++++.+++|..++++|++..+..
T Consensus        37 ~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l~  103 (105)
T PRK11431         37 TAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKLS  103 (105)
T ss_pred             HHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhcc
Confidence            445567777788888877443 344444677888999999999999999999999999999988643

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.41  E-value=0.002  Score=49.21  Aligned_cols=63  Identities=14%  Similarity=0.200  Sum_probs=54.3

Q ss_pred             HHHHHHHHhhhccchhHHHHh-hcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhceeeeecc
Q 019247           95 QGNFLFNKAFQFTSISSVTLL-DCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSD  157 (344)
Q Consensus        95 ~~~~~~~~al~~~~~~~~~~l-~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~  157 (344)
                      ...+++..++++.|.+.+-.+ .....+.+.+++.++++|+++..+++|+.+.++|++.+-..+
T Consensus        42 ~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         42 LSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            337778899999999777666 568888999999999999999999999999999998875533

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.40  E-value=0.0026  Score=47.35  Aligned_cols=61  Identities=20%  Similarity=0.144  Sum_probs=52.2

Q ss_pred             HHHHHHHHhhhccchhHH-HHhhcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhceeeee
Q 019247           95 QGNFLFNKAFQFTSISSV-TLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLL  155 (344)
Q Consensus        95 ~~~~~~~~al~~~~~~~~-~~l~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~  155 (344)
                      ...++...+++..|.+.+ ++-...-.+.+.+.+.+++||++++.+++++.+.+.|++.+-.
T Consensus        41 ~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         41 VSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            347777899999999665 5556688888999999999999999999999999999987643

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.37  E-value=0.0053  Score=55.73  Aligned_cols=139  Identities=17%  Similarity=0.090  Sum_probs=86.5

Q ss_pred             chHHHHHHHHHhHHHHHHHHHHHHHhhcCCChHHHHHHH--HHHHHHHHHHH-HHhhccc---cccccccchhhHHHHHH
Q 019247          167 RPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMI--GVYGLLVSVVQ-LSTLELK---SLESVKWSTDIILSFVG  240 (344)
Q Consensus       167 ~~~~G~~l~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~  240 (344)
                      +...|+++.+++++|++...+-.|| .++-| ++.. |.  .++.-++.... .....+.   .....+.....+..+.|
T Consensus         4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~w~-wE~~-W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G   80 (345)
T PRK13499          4 AIILGIIWHLIGGASSGSFYAPFKK-VKKWS-WETM-WSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFG   80 (345)
T ss_pred             hhHHHHHHHHHHHHHhhcccccccc-cCCCc-hhHH-HHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHH
Confidence            4578999999999999999999988 44433 2222 32  12222222100 1111111   11112222222222222


Q ss_pred             HHHHHHHHHHHHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHhcccc---c----hhhHhHHHHHHHHHHhhhcccc
Q 019247          241 NAASSFMFYTLVPFVLKLSGATMLILSVL-TSDMWAVILRIFCYHQQV---N----WTYYLAFAAVLIGLIIYSTTAK  310 (344)
Q Consensus       241 ~~~~~~~~~~~~~~~l~~~~a~~~~~~~~-~~p~~~~i~~~~~~~e~~---~----~~~~~G~~li~~g~~l~~~~~~  310 (344)
                        +.-.+++..+..++++.+.+..-.+.. +.-+.+.+++.+++||..   +    ...++|.+++++|+++..+...
T Consensus        81 --~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~  156 (345)
T PRK13499         81 --ALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQ  156 (345)
T ss_pred             --HHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhh
Confidence              335577888889999999766654444 777889999999999765   2    3578899999999999987443

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.30  E-value=0.003  Score=47.51  Aligned_cols=59  Identities=17%  Similarity=0.356  Sum_probs=52.0

Q ss_pred             HHHHHHhhhccchhHHHHh-hcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhceeeee
Q 019247           97 NFLFNKAFQFTSISSVTLL-DCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLL  155 (344)
Q Consensus        97 ~~~~~~al~~~~~~~~~~l-~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~  155 (344)
                      .+++..+++..|.+.+-.+ .....+.+.+++++++||++++.+++|+.+.++|++++-.
T Consensus        44 f~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         44 FWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            6677899999999777555 6678888999999999999999999999999999998854

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=97.26  E-value=9.1e-05  Score=63.13  Aligned_cols=137  Identities=15%  Similarity=0.187  Sum_probs=90.2

Q ss_pred             chHHHHHHHHHhHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHH
Q 019247          167 RPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSF  246 (344)
Q Consensus       167 ~~~~G~~l~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (344)
                      ....|..+.-++ .++-...+..++.... ||.......+++-.++. .|..+...... -.+.....|+.+-+. . ..
T Consensus        35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~e~-~p~e~a~~r~l~~mlit-~pcliy~~~~v-~gp~g~R~~LiLRg~-m-G~  108 (346)
T KOG4510|consen   35 KPNLGLLLLTVS-YFFNSCMVVSTKVLEN-DPMELASFRLLVRMLIT-YPCLIYYMQPV-IGPEGKRKWLILRGF-M-GF  108 (346)
T ss_pred             CCccCceehhhH-HHHhhHHHhhhhhhcc-ChhHhhhhhhhhehhhh-heEEEEEeeee-ecCCCcEEEEEeehh-h-hh
Confidence            456788888888 7777777777776554 56555555543333333 23222211111 011112223222222 2 22


Q ss_pred             HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhccc
Q 019247          247 MFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA  309 (344)
Q Consensus       247 ~~~~~~~~~l~~~~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  309 (344)
                      .+..+.++++++.+-+-+..+.+..|++++++++++++|+.|..+.+|..+-+.|+++..+++
T Consensus       109 tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPp  171 (346)
T KOG4510|consen  109 TGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPP  171 (346)
T ss_pred             hHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCC
Confidence            234445577888888888889999999999999999999999999999999999999998765

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.23  E-value=0.0033  Score=54.71  Aligned_cols=68  Identities=7%  Similarity=0.176  Sum_probs=61.8

Q ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhccccCC
Q 019247          245 SFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDL  312 (344)
Q Consensus       245 ~~~~~~~~~~~l~~~~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~  312 (344)
                      -.+.+.+.+.++++.+|.+..+....+.++++++++++++++++..||.+..+..+|+.+........
T Consensus        27 Y~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~   94 (244)
T PF04142_consen   27 YAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS   94 (244)
T ss_pred             HHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence            45667888899999999999999999999999999999999999999999999999999998766543

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=97.21  E-value=0.00089  Score=50.22  Aligned_cols=70  Identities=17%  Similarity=0.246  Sum_probs=61.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhccchhHHHHh-hcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhceee
Q 019247           84 YWYLLLGFVDVQGNFLFNKAFQFTSISSVTLL-DCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLM  153 (344)
Q Consensus        84 ~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l-~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~  153 (344)
                      +++.+.=.++..+...|++.+...+.+.+.++ +++.-++|++.++++.+|..+++.++|+.+.+.|+.+.
T Consensus        42 ~~y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   42 PKYIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            45666677788889999999999999998888 68999999999988877888889999999999999875

Many members are annotated as potential transmembrane proteins.

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.09  E-value=0.019  Score=45.25  Aligned_cols=114  Identities=15%  Similarity=0.124  Sum_probs=81.2

Q ss_pred             HHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHhhccc----cccchHHHHHHHHHHHHHHHHHHHhhhccchhHHH
Q 019247           38 SSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQR----LQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVT  113 (344)
Q Consensus        38 ~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~----~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~  113 (344)
                      -...-.++.++-- +|+.-+++.+..+++.+..+....+++    .++..+++..-|+++...-.+........+++...
T Consensus        16 q~~~N~~L~~~~g-s~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~~lGG~lG~~~V~~~~~~vp~lG~~~~~   94 (138)
T PF04657_consen   16 QAAFNGQLGKALG-SPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWAYLGGLLGVFFVLSNIILVPRLGAALTT   94 (138)
T ss_pred             HHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHHhccHHHHHHHHHHHHHHhhhhhHHHHH
Confidence            3333445554333 699999999999999888777655432    22334555667888887788888888999887666


Q ss_pred             Hh-hcCchhHHHHHHHH----HhcccchHHHHHHHHHHhhhcee
Q 019247          114 LL-DCCAIPCAIVFTWV----FLGTRYSVWQLFGASLCVLGLGL  152 (344)
Q Consensus       114 ~l-~~~~p~~~~lla~l----~l~e~~~~~~~~~~~l~~~Gv~l  152 (344)
                      .+ ..-+.+...++..+    .-|+++++++.+|+.+.++|+.+
T Consensus        95 ~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   95 ILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            55 44555556666664    35689999999999999999864

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.83  E-value=0.02  Score=41.76  Aligned_cols=55  Identities=7%  Similarity=0.142  Sum_probs=31.8

Q ss_pred             HHHHHHHHHHHHHHHhhHHHH-HHHHHHHHHHHHHHHHHHhccccchhhHhHHHHH
Q 019247          244 SSFMFYTLVPFVLKLSGATML-ILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAV  298 (344)
Q Consensus       244 ~~~~~~~~~~~~l~~~~a~~~-~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li  298 (344)
                      +...++.++..++++.+..++ .+..-+..+...+.+.+++||++|+.+++|..+|
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            455677888899999887666 3444478889999999999999999999999876

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.65  E-value=0.0053  Score=44.80  Aligned_cols=51  Identities=16%  Similarity=0.199  Sum_probs=29.3

Q ss_pred             HHHHHHHhhhccchhHHHH-hhcCchhHHHHHHHHHhcccchHHHHHHHHHH
Q 019247           96 GNFLFNKAFQFTSISSVTL-LDCCAIPCAIVFTWVFLGTRYSVWQLFGASLC  146 (344)
Q Consensus        96 ~~~~~~~al~~~~~~~~~~-l~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~  146 (344)
                      ..+++..++++.|.+.+-. ......+.+.+.+.+++||+++..|+.|+.+.
T Consensus        42 s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   42 SFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            3667789999999977755 46688999999999999999999999998763

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=96.64  E-value=0.015  Score=50.55  Aligned_cols=132  Identities=20%  Similarity=0.159  Sum_probs=69.4

Q ss_pred             HHHHHHHhHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHHHHHH
Q 019247          171 GDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYT  250 (344)
Q Consensus       171 G~~l~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (344)
                      |...++.|+++++-..+=.||.-. .|...+..+.+....+...+.....+.+.+     ..  +..+-|. + -..++.
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~~-gDg~~fQw~~~~~i~~~g~~v~~~~~~p~f-----~p--~amlgG~-l-W~~gN~   70 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFDT-GDGFFFQWVMCSGIFLVGLVVNLILGFPPF-----YP--WAMLGGA-L-WATGNI   70 (254)
T ss_pred             CchhHHHHHHHhcccceeeEeccC-CCcHHHHHHHHHHHHHHHHHHHHhcCCCcc-----ee--HHHhhhh-h-hhcCce
Confidence            456678888888888888877543 366555555444444444322222221111     11  1111111 1 122333


Q ss_pred             HHHHHHHHhhHHHHHHHH-HHHHHHHHHHHHH-Hhcccc-----chhhHhHHHHHHHHHHhhhccccCC
Q 019247          251 LVPFVLKLSGATMLILSV-LTSDMWAVILRIF-CYHQQV-----NWTYYLAFAAVLIGLIIYSTTAKDL  312 (344)
Q Consensus       251 ~~~~~l~~~~a~~~~~~~-~~~p~~~~i~~~~-~~~e~~-----~~~~~~G~~li~~g~~l~~~~~~~~  312 (344)
                      +..-.++..|-...-.+- ..+.+.+-..+-+ +||++.     ++..++|.+++++|..++..-+.+.
T Consensus        71 ~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~  139 (254)
T PF07857_consen   71 LVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE  139 (254)
T ss_pred             eehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence            333445555533333222 2344555555433 455443     4579999999999999987655433

The region concerned is approximately 280 residues long.

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=96.48  E-value=0.62  Score=41.97  Aligned_cols=253  Identities=11%  Similarity=0.106  Sum_probs=136.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhh----------ccccccchHHHHHHHHHHHHHHHHHHHhhhccchhHHHH-hhcCchh
Q 019247           53 PITQSVLCYLSLALAYGGILLYR----------RQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTL-LDCCAIP  121 (344)
Q Consensus        53 p~~~~~~r~~~~~l~l~~~~~~~----------~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~-l~~~~p~  121 (344)
                      +++..+.-..+-.-+..|+....          +..+........+.|++.-.+...+=.+++|...+...- ...+...
T Consensus        33 sWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~  112 (344)
T PF06379_consen   33 SWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAV  112 (344)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHH
Confidence            45555555555555555554421          122233455667778777777888889999998866543 3455555


Q ss_pred             HHHHHHHHHhc-------ccchHHHHHHHHHHhhhceeeeecccccCC-----CCCCchHHHHHHHHHhHHHHHHHHHHH
Q 019247          122 CAIVFTWVFLG-------TRYSVWQLFGASLCVLGLGLMLLSDAEMAG-----GGGSRPLLGDILVIAGAIFFAMSYVGE  189 (344)
Q Consensus       122 ~~~lla~l~l~-------e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~-----~~~~~~~~G~~l~l~~~~~~a~~~v~~  189 (344)
                      +-.++-.++.+       ++-....++|++++++|+.+....+..++.     ..+.+...|.+++++|.++.|.++.-.
T Consensus       113 ~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~  192 (344)
T PF06379_consen  113 FGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGL  192 (344)
T ss_pred             HhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence            55555444433       333557899999999999998776543221     123445689999999999999998776


Q ss_pred             HHhhcC--------CChH----HHHHHHHHHHHHHHHHHHHhhc---ccccc---ccccchhhHH--HHHHHHHHHH--H
Q 019247          190 EFLVKK--------IDRV----EVVCMIGVYGLLVSVVQLSTLE---LKSLE---SVKWSTDIIL--SFVGNAASSF--M  247 (344)
Q Consensus       190 ~~~~~~--------~~~~----~~~~~~~~~~~~~~~~~~~~~~---~~~~~---~~~~~~~~~~--~~~~~~~~~~--~  247 (344)
                      ..-..-        .++.    ......+.-|.+..+ ......   ..+..   +.......+.  .+.....+..  .
T Consensus       193 ~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN~-~yc~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~lWy~  271 (344)
T PF06379_consen  193 DAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITNL-IYCLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVLWYS  271 (344)
T ss_pred             HcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHHH-HHHHHHHhhcCCCccccccccccchhHHHHHHHHHHHHHHHH
Confidence            432210        1111    111223333444442 222221   11111   1110111111  1111111122  2


Q ss_pred             HHHHHHHHHHHhh----HHHHHHHHHHHHHHHHHHHHHHhcccc------chhhHhHHHHHHHHHHhhhc
Q 019247          248 FYTLVPFVLKLSG----ATMLILSVLTSDMWAVILRIFCYHQQV------NWTYYLAFAAVLIGLIIYST  307 (344)
Q Consensus       248 ~~~~~~~~l~~~~----a~~~~~~~~~~p~~~~i~~~~~~~e~~------~~~~~~G~~li~~g~~l~~~  307 (344)
                      .+..|-.+-.+.+    ..--.+.+.+..+++-+++.+. +|.=      -...++|+++++.++.++-.
T Consensus       272 qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl~l-kEWKg~s~kt~~vl~~G~~vlI~s~~ivG~  340 (344)
T PF06379_consen  272 QFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGLIL-KEWKGASKKTIRVLVLGIAVLILSVVIVGY  340 (344)
T ss_pred             HHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHHHH-HHhccCCcccHHHHHHHHHHHHHHHHHHhc
Confidence            2222222223333    3333466667788888888765 7652      23568899888888887654

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>TIGR00803 nst UDP-galactose transporter

Probab=96.31  E-value=0.058  Score=46.22  Aligned_cols=68  Identities=15%  Similarity=0.236  Sum_probs=58.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhccchhHHHHhhcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhcee
Q 019247           85 WYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGL  152 (344)
Q Consensus        85 ~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l  152 (344)
                      ..+...+....+..+....++|.+....+....+.++++.+++.++++|+++..+++|+.+.+.|+.+
T Consensus       154 ~~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       154 AVWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            33444455555577788999999999999999999999999999999999999999999999998764

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=96.06  E-value=0.018  Score=51.69  Aligned_cols=135  Identities=13%  Similarity=0.118  Sum_probs=95.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhh-c-CCChhHHHHHHHHHHHHHHHH-HHHHhhccccc-----cc----hHHHHH
Q 019247           21 TLYLLLLGQLVSFSLALSSFTTAVITD-L-GVDAPITQSVLCYLSLALAYG-GILLYRRQRLQ-----VS----WYWYLL   88 (344)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~~l~~-~-~~~~p~~~~~~r~~~~~l~l~-~~~~~~~~~~~-----~~----~~~~~~   88 (344)
                      ++.|...+...-.....-+....++.. + .-.++......-.-.+.+.++ |+.........     ..    ......
T Consensus       161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (316)
T KOG1441|consen  161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLL  240 (316)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHH
Confidence            455666666555555555666665553 1 222677777777777777777 77665332111     11    123334


Q ss_pred             HHHHHHHHHHHHHHhhhccchhHHHHhhcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhceeeee
Q 019247           89 LGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLL  155 (344)
Q Consensus        89 ~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~  155 (344)
                      .+++....|...|..+..+++-..++....-=.++...+++++++++++.+..|.+++++|+.+-..
T Consensus       241 ~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~  307 (316)
T KOG1441|consen  241 NSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSR  307 (316)
T ss_pred             HHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHH
Confidence            4455555588889999999999999999888888889999999999999999999999999987544

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=95.75  E-value=0.82  Score=41.28  Aligned_cols=141  Identities=12%  Similarity=0.055  Sum_probs=88.6

Q ss_pred             HHHHHHHHhHHHHHHHHHHHHHhhcCC----ChHHHHHHHHHHHHHHHHHHHHhhcc---cc-ccccc---cchh-hHHH
Q 019247          170 LGDILVIAGAIFFAMSYVGEEFLVKKI----DRVEVVCMIGVYGLLVSVVQLSTLEL---KS-LESVK---WSTD-IILS  237 (344)
Q Consensus       170 ~G~~l~l~~~~~~a~~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~---~~~~-~~~~  237 (344)
                      .-....+...+..+......|...++.    .+.+..+..-+.-.+++......-+.   .. .....   +..+ ...-
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk   94 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK   94 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence            344555556666777777776655443    35566666556656655322222211   11 11111   1111 1111


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhcccc
Q 019247          238 FVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAK  310 (344)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~l~~~~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  310 (344)
                      ...-.+.-.+-+-+++.++.+.+|++..+...+..+-++++..++++++++..||....+..+|+.+.+....
T Consensus        95 ~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~  167 (345)
T KOG2234|consen   95 VSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSL  167 (345)
T ss_pred             HHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCC
Confidence            1111111223344667788999999999999999999999999999999999999999999999999995443

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=95.75  E-value=0.046  Score=41.10  Aligned_cols=109  Identities=8%  Similarity=0.020  Sum_probs=66.9

Q ss_pred             HhHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 019247          177 AGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVL  256 (344)
Q Consensus       177 ~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  256 (344)
                      +.+++|++.+-+.||..+..++..-.. . .+.-...    ..        .+|...  ..+..    ...+-..|++.+
T Consensus         3 ~Vg~~WG~Tnpfik~g~~~~~~~~~~~-~-~~~~~~~----Ll--------~n~~y~--ipf~l----Nq~GSv~f~~~L   62 (113)
T PF10639_consen    3 LVGILWGCTNPFIKRGSSGLEKVKASL-Q-LLQEIKF----LL--------LNPKYI--IPFLL----NQSGSVLFFLLL   62 (113)
T ss_pred             eehHHhcCchHHHHHHHhhcCCccchH-H-HHHHHHH----HH--------HhHHHH--HHHHH----HHHHHHHHHHHH
Confidence            456889999999999887654332221 1 1111111    00        011111  11222    223334444567


Q ss_pred             HHhhHHHHHHH-HHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhh
Q 019247          257 KLSGATMLILS-VLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIY  305 (344)
Q Consensus       257 ~~~~a~~~~~~-~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~  305 (344)
                      .+.+-+.+..+ +.+.-+++++.++++.+|..+...++|++++++|+.++
T Consensus        63 ~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   63 GSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             hcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            77775555554 46778899999998888888889999999999998764

Many members are annotated as potential transmembrane proteins.

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=95.70  E-value=0.016  Score=48.86  Aligned_cols=77  Identities=13%  Similarity=0.154  Sum_probs=68.7

Q ss_pred             cccchHHHHHHHHHHHHHHHHHHHhhhccchhHHHHhhcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhceeeee
Q 019247           79 LQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLL  155 (344)
Q Consensus        79 ~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~  155 (344)
                      .+..|+...++++.+..++++.+.-..+-++-..+++..+--.||++.+.++++.+++.+||+|..+.+.|...-..
T Consensus       237 hP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~  313 (337)
T KOG1580|consen  237 HPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVV  313 (337)
T ss_pred             ccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhh
Confidence            44567788889999999999999999999999999999999999999999999999999999999999998865444

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=95.48  E-value=0.29  Score=44.37  Aligned_cols=141  Identities=21%  Similarity=0.168  Sum_probs=99.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cC--CChhHHHHHHHHHHHHHHHHHHHHh----hcc----ccccchHH
Q 019247           17 MALRTLYLLLLGQLVSFSLALSSFTTAVITD-LG--VDAPITQSVLCYLSLALAYGGILLY----RRQ----RLQVSWYW   85 (344)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~--~~~p~~~~~~r~~~~~l~l~~~~~~----~~~----~~~~~~~~   85 (344)
                      -..|..+|-+++++.|++-+.-....++-.. +|  +.-+..+.+.. ++..++++|..+.    ++.    +...+...
T Consensus       241 ~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvG-LfnllllwP~l~iL~~~~~e~F~lP~~~q~~~  319 (416)
T KOG2765|consen  241 PASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVG-LFNLLLLWPPLIILDFFGEERFELPSSTQFSL  319 (416)
T ss_pred             CccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHH-HHHHHHHhHHHHHHHHhccCcccCCCCceeEe
Confidence            4466778899999888888777666665444 32  21244433333 2344444444331    111    22223344


Q ss_pred             HHHHHHHHHHH-HHHHHHhhhccchhHHHHhhcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhceeeeeccc
Q 019247           86 YLLLGFVDVQG-NFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDA  158 (344)
Q Consensus        86 ~~~~g~~~~~~-~~~~~~al~~~~~~~~~~l~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~  158 (344)
                      .++.++++... .+++..|.-.+++-.+++-.+++.+..++.-.++.++++++..++|...+++|.+++...+.
T Consensus       320 vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~  393 (416)
T KOG2765|consen  320 VVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE  393 (416)
T ss_pred             eeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence            55667777666 99999999999999999998889888889998888999999999999999999999887664

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=95.42  E-value=0.52  Score=42.48  Aligned_cols=144  Identities=15%  Similarity=0.089  Sum_probs=84.5

Q ss_pred             CchHHHHHHHHHhHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccc----ccccchhhHHHHHHH
Q 019247          166 SRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLE----SVKWSTDIILSFVGN  241 (344)
Q Consensus       166 ~~~~~G~~l~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~  241 (344)
                      .+...|+++..+++++.+.+.+=.||. |+-+-...-....+++-++.........-+++.    ..+.+...+..+.+.
T Consensus         3 ~~ii~Gii~h~iGg~~~~sfy~P~kkv-k~WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~   81 (344)
T PF06379_consen    3 SAIILGIIFHAIGGFASGSFYVPFKKV-KGWSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGV   81 (344)
T ss_pred             chHHHHHHHHHHHHHHhhhhccchhhc-CCccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHH
Confidence            345789999999999999999999885 334444444445556655552222222222221    222233333333333


Q ss_pred             HHHHHHHHHHHHHHHHHhhHHHHH-HHHHHHHHHHHHHHHHHhcc-------ccchhhHhHHHHHHHHHHhhhccccCC
Q 019247          242 AASSFMFYTLVPFVLKLSGATMLI-LSVLTSDMWAVILRIFCYHQ-------QVNWTYYLAFAAVLIGLIIYSTTAKDL  312 (344)
Q Consensus       242 ~~~~~~~~~~~~~~l~~~~a~~~~-~~~~~~p~~~~i~~~~~~~e-------~~~~~~~~G~~li~~g~~l~~~~~~~~  312 (344)
                        .=+++-..+-.++|+.+.+... +..-+.-+++.++.-++.|+       +-....++|.++.++|+.+..+....|
T Consensus        82 --lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~K  158 (344)
T PF06379_consen   82 --LWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMK  158 (344)
T ss_pred             --HHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhh
Confidence              2334455555778888854433 33334555566665554332       223468999999999999998765433

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=94.95  E-value=0.59  Score=37.02  Aligned_cols=119  Identities=12%  Similarity=0.117  Sum_probs=71.8

Q ss_pred             HHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHhhcccc-----ccchHHHHHHHHHHHHHHHHHHHhhhccc
Q 019247           34 SLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRL-----QVSWYWYLLLGFVDVQGNFLFNKAFQFTS  108 (344)
Q Consensus        34 ~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~-----~~~~~~~~~~g~~~~~~~~~~~~al~~~~  108 (344)
                      +.-.-+-.-..+.+ ...+|+.-.+..+.++.+++..+.+.++++.     .+..++.+.-|+++...-...........
T Consensus        16 ~l~~Q~~iN~qL~~-~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lGa~~vt~s~~l~p~lG   94 (150)
T COG3238          16 LLPLQAAINGRLAR-YLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLGAIFVTSSILLAPRLG   94 (150)
T ss_pred             hhhhHHHHHHHHHH-HcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchhhhhhhhhHHhccchh
Confidence            33333344445555 4447999999999998888887776543221     23345566666665555444444445554


Q ss_pred             h-hHHHHhhcCchhHHHHHHHHH----hcccchHHHHHHHHHHhhhceee
Q 019247          109 I-SSVTLLDCCAIPCAIVFTWVF----LGTRYSVWQLFGASLCVLGLGLM  153 (344)
Q Consensus       109 ~-~~~~~l~~~~p~~~~lla~l~----l~e~~~~~~~~~~~l~~~Gv~l~  153 (344)
                      + ....++.+-+.+..+++..+=    -+++++..+++|+.+.++|+.++
T Consensus        95 a~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~  144 (150)
T COG3238          95 AATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLA  144 (150)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHh
Confidence            4 333444545555555544321    24788999999999999995444

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=94.68  E-value=0.013  Score=49.81  Aligned_cols=132  Identities=10%  Similarity=0.028  Sum_probs=82.8

Q ss_pred             HHHHHHHhHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHHHHHH
Q 019247          171 GDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYT  250 (344)
Q Consensus       171 G~~l~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (344)
                      +.++++.=++.|+..-....|..  .+|.+.+.-..+-++++.. ..+.+..+.   ..+.......+ +- +.-..++.
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~G--G~p~qQ~lGtT~GALifai-iv~~~~~p~---~T~~~~iv~~i-sG-~~Ws~GQ~   74 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKFG--GKPYQQTLGTTLGALIFAI-IVFLFVSPE---LTLTIFIVGFI-SG-AFWSFGQA   74 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeecC--CChhHhhhhccHHHHHHHH-HHheeecCc---cchhhHHHHHH-hh-hHhhhhhh
Confidence            46778888999998777665543  3566666655555555553 333332222   12222222222 21 22335677


Q ss_pred             HHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHhccccchhhH----hHHHHHHHHHHhhhcccc
Q 019247          251 LVPFVLKLSGATMLILSVL-TSDMWAVILRIFCYHQQVNWTYY----LAFAAVLIGLIIYSTTAK  310 (344)
Q Consensus       251 ~~~~~l~~~~a~~~~~~~~-~~p~~~~i~~~~~~~e~~~~~~~----~G~~li~~g~~l~~~~~~  310 (344)
                      ..+++.+..+.+.+..+.. .+-+-+.+++++.|||..+..++    +..++++.|+.+..+.++
T Consensus        75 ~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~  139 (288)
T COG4975          75 NQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR  139 (288)
T ss_pred             hhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence            7788888888877775555 55677889999999999988654    456777788887765444

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=94.62  E-value=0.019  Score=50.80  Aligned_cols=125  Identities=15%  Similarity=0.069  Sum_probs=87.4

Q ss_pred             CCCchHHHHHHHHHhHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccccccccccchhhHHHHHHHHH
Q 019247          164 GGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAA  243 (344)
Q Consensus       164 ~~~~~~~G~~l~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (344)
                      ...++.+|..+++.+.++.+....+.||..++...              .    ....++.....-.++..|.   |. +
T Consensus        15 ~~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~--------------~----~~ra~~gg~~yl~~~~Ww~---G~-l   72 (335)
T KOG2922|consen   15 MSSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGA--------------S----GLRAGEGGYGYLKEPLWWA---GM-L   72 (335)
T ss_pred             hccCceeeeeehhhccEEEeeehhhhHHHHHHHhh--------------h----cccccCCCcchhhhHHHHH---HH-H
Confidence            34566789999999999999999999887665311              0    0000111101111222333   22 3


Q ss_pred             HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhcccc
Q 019247          244 SSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAK  310 (344)
Q Consensus       244 ~~~~~~~~~~~~l~~~~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  310 (344)
                      .++++-.+-+.+....+++.++.+..++.+.+++++..+++|++++...+|+++.++|..+......
T Consensus        73 tm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP  139 (335)
T KOG2922|consen   73 TMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAP  139 (335)
T ss_pred             HHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecC
Confidence            3444555555666778999999999999999999999999999999999999999999887765443

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=94.52  E-value=0.2  Score=44.06  Aligned_cols=116  Identities=14%  Similarity=0.088  Sum_probs=81.8

Q ss_pred             HHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHhhc---------cccccchHHHHHHHHHHHHHHHHHHHhhhcc
Q 019247           37 LSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRR---------QRLQVSWYWYLLLGFVDVQGNFLFNKAFQFT  107 (344)
Q Consensus        37 ~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~---------~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~  107 (344)
                      .++..-.++..+.-.+++.+.+.--+..++.-........         +..+..++-.++.+.++..++.+.|+-++.-
T Consensus       186 fTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~F  265 (327)
T KOG1581|consen  186 FTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYSTCGAVGQLFIFYTIERF  265 (327)
T ss_pred             hHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHHhhhhhhheehhhHhhc
Confidence            3333333555443336777666655555555544443221         1234456778889999999988888888777


Q ss_pred             chhHHHHhhcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhcee
Q 019247          108 SISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGL  152 (344)
Q Consensus       108 ~~~~~~~l~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l  152 (344)
                      .+-.-+.++.+-=+++.+++.+.++.+++..||.|+.+.+.|..+
T Consensus       266 Gslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l  310 (327)
T KOG1581|consen  266 GSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL  310 (327)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence            776666666689999999999999999999999998888877754

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=92.59  E-value=0.13  Score=42.31  Aligned_cols=61  Identities=16%  Similarity=0.093  Sum_probs=55.9

Q ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhccc
Q 019247          249 YTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA  309 (344)
Q Consensus       249 ~~~~~~~l~~~~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  309 (344)
                      ++.|..+++..+++.++.+...+..+..+++++++|+++....++...+.+.|+++..+..
T Consensus        67 NY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~D  127 (290)
T KOG4314|consen   67 NYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYAD  127 (290)
T ss_pred             CcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEecc
Confidence            6667788999999999999999999999999999999999999999999999999887544

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=92.21  E-value=0.14  Score=37.29  Aligned_cols=71  Identities=20%  Similarity=0.271  Sum_probs=56.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhccchhHHHHh-hcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhceeee
Q 019247           84 YWYLLLGFVDVQGNFLFNKAFQFTSISSVTLL-DCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLML  154 (344)
Q Consensus        84 ~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l-~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~  154 (344)
                      +.|.+.-.++.-++.++|.-+++.+.+.+..+ ++++-.++++.+..+-.|-...+...|..+.+.|+.+++
T Consensus        53 w~Y~iPFllNqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci  124 (125)
T KOG4831|consen   53 WEYLIPFLLNQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI  124 (125)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence            56777778888889999999999999887776 567788899999755334445667889999999988764

>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine

Probab=89.72  E-value=0.064  Score=47.09  Aligned_cols=132  Identities=11%  Similarity=0.082  Sum_probs=65.6

Q ss_pred             HHhHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcc---------cc-ccccccchhhHH--HHHHHHH
Q 019247          176 IAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLEL---------KS-LESVKWSTDIIL--SFVGNAA  243 (344)
Q Consensus       176 l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~-~~~~~~~~~~~~--~~~~~~~  243 (344)
                      +++.+||+-.-..+|..-++....+...|=+.++.++..++..+.-+         ++ +++.....+.-+  .+.|- +
T Consensus         2 ~itmlcwGSW~nt~kL~~r~gR~~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGG-v   80 (336)
T PF07168_consen    2 VITMLCWGSWPNTQKLAERRGRLPQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGG-V   80 (336)
T ss_pred             eeehhhhcChHHHHHHHHhcCCccceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhh-H
Confidence            45678888887777666554332333444444444444333322211         11 111222222222  22222 3


Q ss_pred             HHHHHHHHHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHhccccc--hhhHhHHHHHHHHHHhhhccc
Q 019247          244 SSFMFYTLVPFVLKLSGATMLILSVL-TSDMWAVILRIFCYHQQVN--WTYYLAFAAVLIGLIIYSTTA  309 (344)
Q Consensus       244 ~~~~~~~~~~~~l~~~~a~~~~~~~~-~~p~~~~i~~~~~~~e~~~--~~~~~G~~li~~g~~l~~~~~  309 (344)
                      ..-+++.+..+++...+-+++-.+.. +..++++.+.|+. +.+.+  ..-+.|.+++++++++-....
T Consensus        81 vfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYfl-d~~~n~a~iLF~GV~cf~iAI~lga~ah  148 (336)
T PF07168_consen   81 VFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYFL-DPKINRAEILFPGVACFLIAIILGAAAH  148 (336)
T ss_pred             hhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeeec-cCCCCCceEEEccHHHHHHHHHHHHHHH
Confidence            34466777777777766444433221 2334455555554 44443  356778888888888766433

Transport is dependent on glucose and a proton gradient [].

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=89.33  E-value=1.9  Score=37.78  Aligned_cols=66  Identities=14%  Similarity=0.165  Sum_probs=56.2

Q ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhcc
Q 019247          243 ASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTT  308 (344)
Q Consensus       243 ~~~~~~~~~~~~~l~~~~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~  308 (344)
                      ++-..+-.+++.++...+++...+.--...++..+++.-+++.+++..||+|...+.+|++.+-..
T Consensus        94 l~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~  159 (372)
T KOG3912|consen   94 LCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL  159 (372)
T ss_pred             HHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence            555666777778888888888887777778899999999999999999999999999999988654

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=87.75  E-value=20  Score=32.16  Aligned_cols=125  Identities=13%  Similarity=0.126  Sum_probs=77.8

Q ss_pred             HHHHHHHHHHHhhcCCC-hH--HHHHHHHHHHHHHHHHHHHhhccccccccccch-hhHHHHHHHHHHHHHHHHHHHHHH
Q 019247          181 FFAMSYVGEEFLVKKID-RV--EVVCMIGVYGLLVSVVQLSTLELKSLESVKWST-DIILSFVGNAASSFMFYTLVPFVL  256 (344)
Q Consensus       181 ~~a~~~v~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l  256 (344)
                      +..+-.+..|......+ |.  ....++.+.+.+... ..-...--++++.++.. .-|...-.+ +-..+....  +++
T Consensus        23 sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~-~lk~~~lv~~~~l~~~~~kk~~P~~~l-f~~~i~t~~--~sl   98 (314)
T KOG1444|consen   23 SSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVL-VLKRLGLVNFRPLDLRTAKKWFPVSLL-FVGMLFTGS--KSL   98 (314)
T ss_pred             HHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH-HHHHhceeecCCcChHHHHHHccHHHH-HHHHHHHcc--ccc
Confidence            33334455666665542 33  344477777776663 22222222333333322 122211111 111111222  678


Q ss_pred             HHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhccc
Q 019247          257 KLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA  309 (344)
Q Consensus       257 ~~~~a~~~~~~~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  309 (344)
                      ++.+.....++-...|++.++....++|-+++...+.....+++|........
T Consensus        99 k~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d  151 (314)
T KOG1444|consen   99 KYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTD  151 (314)
T ss_pred             cccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhcccc
Confidence            89999999999999999999999999999999999999999999988887544

>PRK02237 hypothetical protein; Provisional

Probab=87.22  E-value=1.2  Score=32.83  Aligned_cols=41  Identities=7%  Similarity=0.043  Sum_probs=36.2

Q ss_pred             HHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhcccc
Q 019247          270 TSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAK  310 (344)
Q Consensus       270 ~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  310 (344)
                      .-.+.+.++.+.+-|++|+...++|.+++++|+.+....+|
T Consensus        68 vyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~pR  108 (109)
T PRK02237         68 VYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAPR  108 (109)
T ss_pred             HHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecCC
Confidence            45678889999999999999999999999999988876554

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=86.08  E-value=1.2  Score=32.74  Aligned_cols=41  Identities=10%  Similarity=0.067  Sum_probs=36.5

Q ss_pred             HHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhcccc
Q 019247          270 TSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAK  310 (344)
Q Consensus       270 ~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  310 (344)
                      .-.+.+.++++.+-|++|+...++|..++++|+.+....+|
T Consensus        66 vfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR  106 (107)
T PF02694_consen   66 VFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR  106 (107)
T ss_pred             hHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence            35678899999999999999999999999999999877654

; GO: 0016020 membrane

>PRK02237 hypothetical protein; Provisional

Probab=86.07  E-value=11  Score=27.91  Aligned_cols=44  Identities=20%  Similarity=0.656  Sum_probs=35.9

Q ss_pred             HHhhcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhceeeeec
Q 019247          113 TLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLS  156 (344)
Q Consensus       113 ~~l~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~  156 (344)
                      +.--....+...+..+.+-|+|++..+++|..++++|+.++...
T Consensus        63 AAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~  106 (109)
T PRK02237         63 AAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA  106 (109)
T ss_pred             HHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence            33344556667788999999999999999999999999888664

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=86.03  E-value=18  Score=31.61  Aligned_cols=126  Identities=13%  Similarity=0.058  Sum_probs=76.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHhhhcc
Q 019247           28 GQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFT  107 (344)
Q Consensus        28 ~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~  107 (344)
                      +.++|.+.-|+++...|-...+  +++...++......+.-+.....+.  .++-..+-++-|.+...+|.+..-.++..
T Consensus         4 a~~va~~~fGs~~vPvK~~~~g--Dg~~fQw~~~~~i~~~g~~v~~~~~--~p~f~p~amlgG~lW~~gN~~~vpii~~i   79 (254)
T PF07857_consen    4 ACIVAVLFFGSNFVPVKKFDTG--DGFFFQWVMCSGIFLVGLVVNLILG--FPPFYPWAMLGGALWATGNILVVPIIKTI   79 (254)
T ss_pred             hHHHHHHHhcccceeeEeccCC--CcHHHHHHHHHHHHHHHHHHHHhcC--CCcceeHHHhhhhhhhcCceeehhHhhhh
Confidence            4445555556655555544433  4566555555444444333333332  22334455666788888899999999999


Q ss_pred             chhHHHHhhcCchhHH-HHHHHH-Hhccc-----chHHHHHHHHHHhhhceeeeecc
Q 019247          108 SISSVTLLDCCAIPCA-IVFTWV-FLGTR-----YSVWQLFGASLCVLGLGLMLLSD  157 (344)
Q Consensus       108 ~~~~~~~l~~~~p~~~-~lla~l-~l~e~-----~~~~~~~~~~l~~~Gv~l~~~~~  157 (344)
                      ..+....+-++.-..+ -..+++ +++++     -+...++|++++++|..+...-+
T Consensus        80 GLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik  136 (254)
T PF07857_consen   80 GLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIK  136 (254)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeec
Confidence            9999998876644443 233322 33322     25668999999999988776543

The region concerned is approximately 280 residues long.

>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []

Probab=85.86  E-value=15  Score=28.70  Aligned_cols=18  Identities=17%  Similarity=0.336  Sum_probs=11.1

Q ss_pred             hhHhHHHHHHHHHHhhhc
Q 019247          290 TYYLAFAAVLIGLIIYST  307 (344)
Q Consensus       290 ~~~~G~~li~~g~~l~~~  307 (344)
                      ..++|..+++.|++....
T Consensus        88 ~~i~g~~~~~~G~~~i~l  105 (136)
T PF08507_consen   88 SIIIGLLLFLVGVIYIIL  105 (136)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            355666667777665553

In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=84.63  E-value=0.83  Score=39.76  Aligned_cols=135  Identities=13%  Similarity=0.120  Sum_probs=79.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHhhcc--------cc--ccchHHHHHH
Q 019247           20 RTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQ--------RL--QVSWYWYLLL   89 (344)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~--------~~--~~~~~~~~~~   89 (344)
                      -.+.|+++|.+.++..+.-+...++........-+.++++.-..+.++++|.+.....        +.  .+-|..+.+-
T Consensus       182 ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLs  261 (347)
T KOG1442|consen  182 LSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLS  261 (347)
T ss_pred             cchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHH
Confidence            4578899999988888777766665544433357888999999999999988774321        11  1122222333


Q ss_pred             HHHHHHHHHHHHHhhhccchhHHHHhhcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhceeee
Q 019247           90 GFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLML  154 (344)
Q Consensus        90 g~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~  154 (344)
                      |+++...++--..=++.++|-...+=...-...-.+++..+++|-.+...|-+-.+.+.|...-.
T Consensus       262 glfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT  326 (347)
T KOG1442|consen  262 GLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYT  326 (347)
T ss_pred             HHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHH
Confidence            34444334333344444444222111112223345678889999999888887666555554433

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=84.25  E-value=9.4  Score=28.21  Aligned_cols=45  Identities=22%  Similarity=0.659  Sum_probs=38.0

Q ss_pred             HHhhcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhceeeeecc
Q 019247          113 TLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSD  157 (344)
Q Consensus       113 ~~l~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~  157 (344)
                      +.--....+...+..+.+-|+|++..+++|..+|++|+.++....
T Consensus        61 AAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P  105 (107)
T PF02694_consen   61 AAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP  105 (107)
T ss_pred             HHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence            444556677788889999999999999999999999999988743

; GO: 0016020 membrane

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	344
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	99.1
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.73
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.43
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.3

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=99.10  E-value=2.6e-10  Score=88.31  Aligned_cols=67  Identities=9%  Similarity=0.056  Sum_probs=50.8

Q ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHH-HHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhccc
Q 019247          243 ASSFMFYTLVPFVLKLSGATMLILS-VLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA  309 (344)
Q Consensus       243 ~~~~~~~~~~~~~l~~~~a~~~~~~-~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  309 (344)
                      ++.+++|.++.+++++.++.++..+ ..+.|+++++++++++||++++.+++|+++|++|+++.+..+
T Consensus        38 ~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            5677889999999999999999888 799999999999999999999999999999999999998654

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.73  E-value=4.4e-07  Score=67.60  Aligned_cols=67  Identities=9%  Similarity=0.056  Sum_probs=61.1

Q ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHH-HHHHHHHHHHHHHHHhccccchhhHhHHHHHHHHHHhhhccc
Q 019247          243 ASSFMFYTLVPFVLKLSGATMLILS-VLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA  309 (344)
Q Consensus       243 ~~~~~~~~~~~~~l~~~~a~~~~~~-~~~~p~~~~i~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  309 (344)
                      ++.+.++.++.+++++.+...+-.+ ..+.|+.+.+++++++||++++.+++|..+|++|+++.+..+
T Consensus        38 ~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            5567789999999999999999877 789999999999999999999999999999999999997643

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.43  E-value=1.6e-06  Score=64.58  Aligned_cols=69  Identities=14%  Similarity=0.272  Sum_probs=59.8

Q ss_pred             HHHHHHHHH-HHHHHHhhhccchhHHHHh-hcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhceeeeec
Q 019247           88 LLGFVDVQG-NFLFNKAFQFTSISSVTLL-DCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLS  156 (344)
Q Consensus        88 ~~g~~~~~~-~~~~~~al~~~~~~~~~~l-~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~  156 (344)
                      +.+.+.... .+++..++++.|.+.+..+ ..+.|+++++++++++||++++.+++|+.+.+.|++++...
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            444444444 7778899999999999888 79999999999999999999999999999999999988664

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.30  E-value=6.8e-07  Score=69.03  Aligned_cols=70  Identities=14%  Similarity=0.270  Sum_probs=49.4

Q ss_pred             HHHHHHHHH-HHHHHHhhhccchhHHHHh-hcCchhHHHHHHHHHhcccchHHHHHHHHHHhhhceeeeecc
Q 019247           88 LLGFVDVQG-NFLFNKAFQFTSISSVTLL-DCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSD  157 (344)
Q Consensus        88 ~~g~~~~~~-~~~~~~al~~~~~~~~~~l-~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~  157 (344)
                      +.+++.... .+++..++++.+++.+..+ .++.|++++++++++++|++++.+++|++++++|++++...+
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            445444444 7788899999999988888 899999999999999999999999999999999999986543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00