Citrus Sinensis ID: 019301

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340---
Protein Sequence
MEVEGGNTSANDAVARKIPIQSRRAKVFYQFTQQNLPACKPVLTPSWIVTTFLLMGVIFIPIGLVTLRTSHSVIEIVERYDTECIPEKFRGNKVSYIKDSTILKNCSLYLKVPKHMKAPIYIYYQLDNYYQNHRRYVKSRNDQQLLHGLKSNDTSSCQPEDSSNGLPIVPCGLIAWSLFNDTFKFIRESSELVVNRKNIAWKSDRNHKFGKQVYPFNFQNGTFIGGGSLDPSVPLSDQEDLIVWMRTAALPSFRKMYGRIEEDLDADDVIAVHLMNNYNTYSFGGKKKLVLSTSSWLGGKNDFLGVAYVFVGSSSIIISLVFMLLHVKNPRPYGETAYLSWNR
Secondary Structure (PSIPRED)
ccccccccccccHHccccccccccccccccccEEEcccccEEccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEccccccccccccccccEEccccccEEEEEEEEEcccccccEEEEEEEccccHHHHHHHHcccHHHHccccccccccccccccccccccEEEcccEEccccccEEEEEEcccEEEccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccHHHHHHEEcccccccccEEEEEEEEcccccccccEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccccHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEccccccccccccccEEcccccccccEEEEEEEEcccccccEEEEEEcccHHHcccHEEEEccHHHHccccccccccccccccccccccEcccHHHHHHcccccEEEcccccEEEEccccEEcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccHHHHHHHHHHHcccccccEEEEEEEEcccEEEEccEEEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEccccc
Coil and Loop (DISEMBL)
meveggntsandavarkipiqsrRAKVFYQFTqqnlpackpvltpswIVTTFLLMGVIFIPIGLVTLRTSHSVIEIVErydtecipekfrgnkvsyikdstilkNCSLylkvpkhmkapiyIYYQLDNYYQNHRRYVKsrndqqllhglksndtsscqpedssnglpivpcgliawSLFNDTFKFIRESSELVVNRKNiawksdrnhkfgkqvypfnfqngtfigggsldpsvplsdqeDLIVWMRTAALPSFRKMYGRIEEDLDADDVIAVHLMNnyntysfggkKKLVLSTSswlggkndFLGVAYVFVGSSSIIISLVFMLLHvknprpygetayLSWNR
Flexible Loop (DISEMBL)
meveggntsandavarkipiqsRRAKVFYQFTQqnlpackpvLTPSWIVTTFLLMGVIFIPIGLVTLRTSHSVIEIVerydtecipekfrgnkvsyikdstiLKNCSLYLKVPKHMKAPIYIYYQLDNYYQNHRRYVKSRNDQQLLHGLKSNDTSSCQPEDSSNGLPIVPCGLIAWSLFNDTFKFIRESselvvnrkniawksdrnhkfgKQVYPFNFQNGTFIGGGSLDPSVPLSDQEDLIVWMRTAALPSFRKMYGRIEEDLDADDVIAVHLMNNYNTYSFGGKKKLVLSTSSWLGGKNDFLGVAYVFVGSSSIIISLVFMLLHVknprpygetaylswnr
Low Complexity Region (SEG)
MEVEGGNTSANDAVARKIPIQSRRAKVFYQFTQQNLPACKPVLTPSWIVTTFLLMGVIFIPIGLVTLRTSHSVIEIVERYDTECIPEKFRGNKVSYIKDSTILKNCSLYLKVPKHMKAPIYIYYQLDNYYQNHRRYVKSRNDQQLLHGLKSNDTSSCQPEDSSNGLPIVPCGLIAWSLFNDTFKFIRESSELVVNRKNIAWKSDRNHKFGKQVYPFNFQNGTFIGGGSLDPSVPLSDQEDLIVWMRTAALPSFRKMYGRIEEDLDADDVIAVHLMNNYNTYSFGGKKKLVLSTSSWLGGKNDFLGVAYVFVGSSSIIISLVFMLLHVKNPRPYGETAYLSWNR
Disordered region (IsUnstruct)
*****************IPIQSRRAKVFYQFTQQNLPACKPVLTPSWIVTTFLLMGVIFIPIGLVTLRTSHSVIEIVERYDTECIPEKFRGNKVSYIKDSTILKNCSLYLKVPKHMKAPIYIYYQLDNYYQNHRRYVK***************************LPIVPCGLIAWSLFNDTFKFIRESSELVVNRKNIAWKSDRNHKFGKQVYPFNFQNGTFIGGGSLDPSVPLSDQEDLIVWMRTAALPSFRKMYGRIEEDLDADDVIAVHLMNNYNTYSFGGKKKLVLSTSSWLGGKNDFLGVAYVFVGSSSIIISLVFMLLHVKNPRPYGETAYLS***
Disordered Region (DISOPRED)
*******************************TQQNLPACKPVLTPSWIVTTFLLMGVIFIPIGLVTLRTSHSVIEIVERYDTECIPEKFRGNKVSYIKDSTILKNCSLYLKVPKHMKAPIYIYYQLDNYYQNHRRYVKSRNDQQLLHGLKSNDTSSCQPEDSSNGLPIVPCGLIAWSLFNDTFKFIRESSELVVNRKNIAWKSDRNHKFGKQVYPFNFQNGTFIGGGSLDPSVPLSDQEDLIVWMRTAALPSFRKMYGRIEEDLDADDVIAVHLMNNYNTYSFGGKKKLVLSTSSWLGGKNDFLGVAYVFVGSSSIIISLVFMLLHVKNPRPYGET*YLSWN*
Disordered Region (DISEMBL)
***********DAVARKIPIQSRRAKVFYQFTQQNLPACKPVLTPSWIVTTFLLMGVIFIPIGLVTLRTSHSVIEIVERYDTECIPEKFRGNKVSYIKDSTILKNCSLYLKVPKHMKAPIYIYYQLDNYYQNHRRYVKSRNDQQLLHGLK************SNGLPIVPCGLIAWSLFNDTFKFIRESSELVVNRKNIAWKSDRNHKFGKQVYPFNFQNGTFIGGGSLDPSVPLSDQEDLIVWMRTAALPSFRKMYGRIEEDLDADDVIAVHLMNNYNTYSFGGKKKLVLSTSSWLGGKNDFLGVAYVFVGSSSIIISLVFMLLHVKNPRPYGETAYLSWNR
Disordered Region (DISPRO)
**************************VFYQFTQQNLPACKPVLTPSWIVTTFLLMGVIFIPIGLVTLRTSHSVIEIVERYDTECIPEKFRGNKVSYIKDSTILKNCSLYLKVPKHMKAPIYIYYQLDNYYQNHRRYVKSRNDQQLLHGLK**DTSSCQPEDSSNGLPIVPCGLIAWSLFNDTFKFIRESSELVVNRKNIAWKSDRNHKFGKQVYPFNFQNGTFIGGGSLDPSVPLSDQEDLIVWMRTAALPSFRKMYGRIEEDLDADDVIAVHLMNNYNTYSFGGKKKLVLSTSSWLGGKNDFLGVAYVFVGSSSIIISLVFMLLHVKNPRPYGETA******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEVEGGNTSANDAVARKIPIQSRRAKVFYQFTQQNLPACKPVLTPSWIVTTFLLMGVIFIPIGLVTLRTSHSVIEIVERYDTECIPEKFRGNKVSYIKDSTILKNCSLYLKVPKHMKAPIYIYYQLDNYYQNHRRYVKSRNDQQLLHGLKSNDTSSCQPEDSSNGLPIVPCGLIAWSLFNDTFKFIRESSELVVNRKNIAWKSDRNHKFGKQVYPFNFQNGTFIGGGSLDPSVPLSDQEDLIVWMRTAALPSFRKMYGRIEEDLDADDVIAVHLMNNYNTYSFGGKKKLVLSTSSWLGGKNDFLGVAYVFVGSSSIIISLVFMLLHVKNPRPYGETAYLSWNR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	343	2.2.26 [Sep-21-2011]
Q67YS6	343	Putative ALA-interacting	yes	no	0.982	0.982	0.705	1e-140
Q9SLK2	349	ALA-interacting subunit 3	no	no	0.932	0.916	0.618	1e-119
Q9LTW0	350	ALA-interacting subunit 1	no	no	0.932	0.914	0.614	1e-118
Q8L8W0	350	ALA-interacting subunit 5	no	no	0.932	0.914	0.605	1e-117
Q9SA35	336	Putative ALA-interacting	no	no	0.912	0.931	0.617	1e-116
Q3MIR4	351	Cell cycle control protei	yes	no	0.848	0.829	0.359	1e-46
Q1MTQ5	396	Meiotically up-regulated	yes	no	0.973	0.843	0.350	4e-46
Q8BHG3	353	Cell cycle control protei	yes	no	0.848	0.824	0.350	2e-44
Q8VEK0	364	Cell cycle control protei	no	no	0.827	0.780	0.371	4e-43
Q5F362	372	Cell cycle control protei	yes	no	0.857	0.790	0.371	9e-43

>sp|Q67YS6|ALIS2_ARATH Putative ALA-interacting subunit 2 OS=Arabidopsis thaliana GN=ALIS2 PE=2 SV=1

 Score =  499 bits (1284), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 242/343 (70%), Positives = 286/343 (83%), Gaps = 6/343 (1%)

Query: 1   MEVEGGNTSANDAVARKIPIQSRRAKVFYQFTQQNLPACKPVLTPSWIVTTFLLMGVIFI 60
           MEVEG   S N A  +   ++SRR+K  YQF QQ LPACKPVLTP  ++T F+LMG +FI
Sbjct: 2   MEVEG---SMNRAPDQSSFLRSRRSKALYQFKQQKLPACKPVLTPISVITVFMLMGFVFI 58

Query: 61  PIGLVTLRTSHSVIEIVERYDTECIPEKFRGNKVSYIKDSTILKNCSLYLKVPKHMKAPI 120
           PIGL+TLR S   IEI++RYD ECIPE++R NK+ YI DS+I KNC+ YLKV K+MKAPI
Sbjct: 59  PIGLITLRASRDAIEIIDRYDVECIPEEYRTNKLLYITDSSIPKNCTRYLKVQKYMKAPI 118

Query: 121 YIYYQLDNYYQNHRRYVKSRNDQQLLHGLKSNDTSSCQPEDSSNGLPIVPCGLIAWSLFN 180
           +IYYQLDNYYQNHRRYVKSR+DQQLLHGL+ + TSSC+PE+SSNGLPIVPCGLIAWS+FN
Sbjct: 119 FIYYQLDNYYQNHRRYVKSRSDQQLLHGLEYSHTSSCEPEESSNGLPIVPCGLIAWSMFN 178

Query: 181 DTFKFIRESSELVVNRKNIAWKSDRNHKFGKQVYPFNFQNGTFIGGGSLDPSVPLSDQED 240
           DTF F RE ++L V+R NIAWKSDR HKFGK VYP NFQNGT IGG  LDP +PLSDQED
Sbjct: 179 DTFTFSRERTKLNVSRNNIAWKSDREHKFGKNVYPINFQNGTLIGGAKLDPKIPLSDQED 238

Query: 241 LIVWMRTAALPSFRKMYGRIEEDLDADDVIAVHLMNNYNTYSFGGKKKLVLSTSSWLGGK 300
            IVWMR AAL SFRK+YGRIEEDL+   V+ V+LMNNYNTYSF G+KKL+LSTS+WLGG+
Sbjct: 239 FIVWMRAAALLSFRKLYGRIEEDLEPGKVVEVNLMNNYNTYSFSGQKKLILSTSNWLGGR 298

Query: 301 NDFLGVAYVFVGSSSIIISLVFMLLHVKNPRPYGETAYLSWNR 343
           NDFLG+ Y+ VGSSSI+IS++FMLLH+KNPRPYG+    SWN+
Sbjct: 299 NDFLGITYLVVGSSSIVISIIFMLLHLKNPRPYGDN---SWNK 338

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SLK2|ALIS3_ARATH ALA-interacting subunit 3 OS=Arabidopsis thaliana GN=ALIS3 PE=1 SV=1

 Score =  427 bits (1099), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 199/322 (61%), Positives = 247/322 (76%), Gaps = 2/322 (0%)

Query: 22  SRRAKVFYQFTQQNLPACKPVLTPSWIVTTFLLMGVIFIPIGLVTLRTSHSVIEIVERYD 81
           S+R K + +FTQQ LPACKP+LTP W+++TFL++ VIFIP+G+++L  S  V+EIV+RYD
Sbjct: 25  SKRPK-YSKFTQQELPACKPILTPGWVISTFLIVSVIFIPLGVISLFASQDVVEIVDRYD 83

Query: 82  TECIPEKFRGNKVSYIKDSTILKNCSLYLKVPKHMKAPIYIYYQLDNYYQNHRRYVKSRN 141
           TECIP   R NKV+YI+     K C+  LKV K MK PIY+YYQL+N+YQNHRRYVKSR+
Sbjct: 84  TECIPAPARTNKVAYIQGDGD-KVCNRDLKVTKRMKQPIYVYYQLENFYQNHRRYVKSRS 142

Query: 142 DQQLLHGLKSNDTSSCQPEDSSNGLPIVPCGLIAWSLFNDTFKFIRESSELVVNRKNIAW 201
           D QL      N  S+C+PED   G PIVPCGLIAWSLFNDT+   R +  L VN+K IAW
Sbjct: 143 DSQLRSTKYENQISACKPEDDVGGQPIVPCGLIAWSLFNDTYALSRNNVSLAVNKKGIAW 202

Query: 202 KSDRNHKFGKQVYPFNFQNGTFIGGGSLDPSVPLSDQEDLIVWMRTAALPSFRKMYGRIE 261
           KSD+ HKFG +V+P NFQ G   GG +LDP +PLS+QEDLIVWMRTAALP+FRK+YG+IE
Sbjct: 203 KSDKEHKFGNKVFPKNFQKGNITGGATLDPRIPLSEQEDLIVWMRTAALPTFRKLYGKIE 262

Query: 262 EDLDADDVIAVHLMNNYNTYSFGGKKKLVLSTSSWLGGKNDFLGVAYVFVGSSSIIISLV 321
            DL+  D I V L NNYNTYSF GKKKLVLST+SWLGGKNDFLG+AY+ VG    I++L 
Sbjct: 263 SDLEMGDTIHVKLNNNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGICFILALA 322

Query: 322 FMLLHVKNPRPYGETAYLSWNR 343
           F ++++  PR  G+ +YLSWNR
Sbjct: 323 FTIMYLVKPRRLGDPSYLSWNR 344

Required for the lipid transport activity of the ALA/ALIS P4-ATPase complex.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LTW0|ALIS1_ARATH ALA-interacting subunit 1 OS=Arabidopsis thaliana GN=ALIS1 PE=1 SV=1

 Score =  424 bits (1090), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 198/322 (61%), Positives = 246/322 (76%), Gaps = 2/322 (0%)

Query: 22  SRRAKVFYQFTQQNLPACKPVLTPSWIVTTFLLMGVIFIPIGLVTLRTSHSVIEIVERYD 81
           S+R K + +FTQQ LPACKP+LTP W+++TFL++ VIFIP+G+++L  S  V+EIV+RYD
Sbjct: 26  SKRPK-YSKFTQQELPACKPILTPGWVISTFLIISVIFIPLGVISLFASQDVVEIVDRYD 84

Query: 82  TECIPEKFRGNKVSYIKDSTILKNCSLYLKVPKHMKAPIYIYYQLDNYYQNHRRYVKSRN 141
           + CIP   R NKV+YI+  T  K+C+  L VPK MK PIY+YYQL+N+YQNHRRYVKSR+
Sbjct: 85  SACIPLSDRANKVAYIQ-GTGNKSCTRTLIVPKRMKQPIYVYYQLENFYQNHRRYVKSRS 143

Query: 142 DQQLLHGLKSNDTSSCQPEDSSNGLPIVPCGLIAWSLFNDTFKFIRESSELVVNRKNIAW 201
           D QL      N   +C+PED   G PIVPCGLIAWSLFNDT+   R +  L VN+K IAW
Sbjct: 144 DSQLRSVKDENQIDACKPEDDFGGQPIVPCGLIAWSLFNDTYVLSRNNQGLTVNKKGIAW 203

Query: 202 KSDRNHKFGKQVYPFNFQNGTFIGGGSLDPSVPLSDQEDLIVWMRTAALPSFRKMYGRIE 261
           KSD+ HKFGK V+P NFQ G   GG SLDP+ PLSDQEDLIVWMRTAALP+FRK+YG+IE
Sbjct: 204 KSDKEHKFGKNVFPKNFQKGNLTGGASLDPNKPLSDQEDLIVWMRTAALPTFRKLYGKIE 263

Query: 262 EDLDADDVIAVHLMNNYNTYSFGGKKKLVLSTSSWLGGKNDFLGVAYVFVGSSSIIISLV 321
            DL+  + I V L NNYNTYSF GKKKLVLST+SWLGGKNDFLG+AY+ VG    +++L 
Sbjct: 264 SDLEKGENIQVTLQNNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGICFVLALA 323

Query: 322 FMLLHVKNPRPYGETAYLSWNR 343
           F ++++  PR  G+  YLSWNR
Sbjct: 324 FTVMYLVKPRRLGDPTYLSWNR 345

Required for the lipid transport activity of the ALA/ALIS P4-ATPase complex.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8L8W0|ALIS5_ARATH ALA-interacting subunit 5 OS=Arabidopsis thaliana GN=ALIS5 PE=1 SV=1

 Score =  421 bits (1081), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 195/322 (60%), Positives = 248/322 (77%), Gaps = 2/322 (0%)

Query: 22  SRRAKVFYQFTQQNLPACKPVLTPSWIVTTFLLMGVIFIPIGLVTLRTSHSVIEIVERYD 81
           S+R K + +FTQQ LPACKP+LTP W++ TFL+ GV+FIP+G++ L  S  V+EIV+RYD
Sbjct: 25  SKRPK-YSRFTQQELPACKPILTPRWVILTFLVAGVVFIPLGVICLFASQGVVEIVDRYD 83

Query: 82  TECIPEKFRGNKVSYIKDSTILKNCSLYLKVPKHMKAPIYIYYQLDNYYQNHRRYVKSRN 141
           T+CIP   R N V+YI+     K C   + V K MK P+Y+YYQL+N+YQNHRRYVKSRN
Sbjct: 84  TDCIPTSSRNNMVAYIQGEGD-KICKRTITVTKAMKHPVYVYYQLENFYQNHRRYVKSRN 142

Query: 142 DQQLLHGLKSNDTSSCQPEDSSNGLPIVPCGLIAWSLFNDTFKFIRESSELVVNRKNIAW 201
           D QL    + +D  +C PED+  G PIVPCGL+AWSLFNDT+ F R S +L+VN+K I+W
Sbjct: 143 DAQLRSPKEEHDVKTCAPEDNVGGEPIVPCGLVAWSLFNDTYSFSRNSQQLLVNKKGISW 202

Query: 202 KSDRNHKFGKQVYPFNFQNGTFIGGGSLDPSVPLSDQEDLIVWMRTAALPSFRKMYGRIE 261
           KSDR +KFGK V+P NFQ G  IGGG+L+ S PLS+QEDLIVWMRTAALP+FRK+YG+IE
Sbjct: 203 KSDRENKFGKNVFPKNFQKGAPIGGGTLNISKPLSEQEDLIVWMRTAALPTFRKLYGKIE 262

Query: 262 EDLDADDVIAVHLMNNYNTYSFGGKKKLVLSTSSWLGGKNDFLGVAYVFVGSSSIIISLV 321
            DL A D I V L NNYNTYSF G+KKLVLST+SWLGG+NDFLG+AY+ VGS  + +++ 
Sbjct: 263 TDLHAGDTITVLLQNNYNTYSFNGQKKLVLSTTSWLGGRNDFLGIAYLTVGSICLFLAVT 322

Query: 322 FMLLHVKNPRPYGETAYLSWNR 343
           F +L++  PR  G+ +YLSWNR
Sbjct: 323 FAVLYLVKPRQLGDPSYLSWNR 344

Required for the lipid transport activity of the ALA/ALIS P4-ATPase complex.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SA35|ALIS4_ARATH Putative ALA-interacting subunit 4 OS=Arabidopsis thaliana GN=ALIS4 PE=2 SV=2

 Score =  419 bits (1077), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 194/314 (61%), Positives = 242/314 (77%), Gaps = 1/314 (0%)

Query: 30  QFTQQNLPACKPVLTPSWIVTTFLLMGVIFIPIGLVTLRTSHSVIEIVERYDTECIPEKF 89
           +FTQQ LPACKP+LTP W++ TFL+ GV+FIP+G++ L  S  VIEIV+RYDT+CIP   
Sbjct: 18  RFTQQELPACKPILTPKWVILTFLVSGVVFIPLGVICLFASQGVIEIVDRYDTDCIPLSS 77

Query: 90  RGNKVSYIKDSTILKNCSLYLKVPKHMKAPIYIYYQLDNYYQNHRRYVKSRNDQQLLHGL 149
           R NKV YI+     K C+  + V K MK P+Y+YYQL+NYYQNHRRYVKSR D QL    
Sbjct: 78  RDNKVRYIQGLED-KRCNRTITVTKTMKNPVYVYYQLENYYQNHRRYVKSRQDGQLRSPK 136

Query: 150 KSNDTSSCQPEDSSNGLPIVPCGLIAWSLFNDTFKFIRESSELVVNRKNIAWKSDRNHKF 209
             ++T SC PED+  G PIVPCGL+AWSLFNDT+ F R + +L VN+K+I+WKSDR  KF
Sbjct: 137 DEHETKSCAPEDTLGGQPIVPCGLVAWSLFNDTYDFTRNNQKLPVNKKDISWKSDRESKF 196

Query: 210 GKQVYPFNFQNGTFIGGGSLDPSVPLSDQEDLIVWMRTAALPSFRKMYGRIEEDLDADDV 269
           GK V+P NFQ G+ IGG SLD  +PLS+QEDLIVWMRTAALP+FRK+YG+I+ DL A D 
Sbjct: 197 GKNVFPKNFQKGSLIGGKSLDQDIPLSEQEDLIVWMRTAALPTFRKLYGKIDTDLQAGDT 256

Query: 270 IAVHLMNNYNTYSFGGKKKLVLSTSSWLGGKNDFLGVAYVFVGSSSIIISLVFMLLHVKN 329
           I V L NNYNTYSF GKKKLVLST+SWLGG+NDFLG+AY+ VGS  + +++ F +L++  
Sbjct: 257 IKVLLQNNYNTYSFNGKKKLVLSTTSWLGGRNDFLGIAYLTVGSICLFLAVSFSVLYLAK 316

Query: 330 PRPYGETAYLSWNR 343
           PR  G+ +YLSWNR
Sbjct: 317 PRQLGDPSYLSWNR 330

Arabidopsis thaliana (taxid: 3702)

>sp|Q3MIR4|CC50B_HUMAN Cell cycle control protein 50B OS=Homo sapiens GN=TMEM30B PE=2 SV=1

 Score =  187 bits (474), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/331 (35%), Positives = 177/331 (53%), Gaps = 40/331 (12%)

Query: 31  FTQQNLPACKPVLTPSWIVTTFLLMGVIFIPIGLVTLRTSHSVIEIVERYDTECIPEKFR 90
           FTQQ LPA +P+L+ S  +  F   G+ FI +GL    +S+ + E+   YD    P    
Sbjct: 18  FTQQRLPAWQPLLSASIALPLFFCAGLAFIGLGLGLYYSSNGIKEL--EYDYTGDPGTGN 75

Query: 91  GNKVSYIKDSTILK---NCSLYLKVPKHMKAPIYIYYQLDNYYQNHRRYVKSRNDQQLLH 147
            +  +       L    +C+ Y  +P+  + P+Y+YY+L N+YQN+RRY  SR+D QL  
Sbjct: 76  CSVCAAAGQGRALPPPCSCAWYFSLPELFQGPVYLYYELTNFYQNNRRYGVSRDDAQL-S 134

Query: 148 GLKS---NDTSSCQP-EDSSNGLPIVPCGLIAWSLFNDTFKFIRESS------ELVVNRK 197
           GL S   +  + C P + S+ GLPI PCG IA SLFND+F    +        E+ ++R 
Sbjct: 135 GLPSALRHPVNECAPYQRSAAGLPIAPCGAIANSLFNDSFSLWHQRQPGGPYVEVPLDRS 194

Query: 198 NIAWKSDRNHKFGKQVYPFNFQNGT----FIGGG------------SLDPSVPLSDQEDL 241
            IAW +D + KF          NG+    F G              S DP+      +D 
Sbjct: 195 GIAWWTDYHVKFRNP----PLVNGSLALAFQGTAPPPNWRRPVYELSPDPNNTGFINQDF 250

Query: 242 IVWMRTAALPSFRKMYGRIEEDLDADDV----IAVHLMNNYNTYSFGGKKKLVLSTSSWL 297
           +VWMRTAALP+FRK+Y RI +   +  +      V++  NY   +FGG K L+ S+ SW+
Sbjct: 251 VVWMRTAALPTFRKLYARIRQGNYSAGLPRGAYRVNITYNYPVRAFGGHKLLIFSSISWM 310

Query: 298 GGKNDFLGVAYVFVGSSSIIISLVFMLLHVK 328
           GGKN FLG+AY+ VGS  I+   V ++++++
Sbjct: 311 GGKNPFLGIAYLVVGSLCILTGFVMLVVYIR 341

Homo sapiens (taxid: 9606)

>sp|Q1MTQ5|MUG89_SCHPO Meiotically up-regulated gene 89 protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mug89 PE=1 SV=1

 Score =  185 bits (470), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 135/385 (35%), Positives = 195/385 (50%), Gaps = 51/385 (13%)

Query: 4   EGGNTSANDAVARKIPIQSRRAKVFYQFTQQNLPACKPVLTPSWIVTTFLLMGVIFIPIG 63
           E  N + +D  A   P+   RA     F QQ + + +P+LTP  ++  F ++G+IF P+G
Sbjct: 3   EALNENVSDT-ASNGPVAKTRAPPNTSFRQQRIKSWQPLLTPKIVLPLFFVLGIIFGPLG 61

Query: 64  LVTLRTSHSVIEIVERYDTEC-----------IPEKF------RGNKVSYIKDSTILK-- 104
              L  S  V E+V  Y T+C           +P K       +   + + K+ST  K  
Sbjct: 62  GGLLYASSIVQELVVDY-TDCETLASYDEFSAVPSKKYTASFDQSGTIGFDKESTYWKLE 120

Query: 105 ------------NCSLYLKVPKHMKAPIYIYYQLDNYYQNHRRYVKSRNDQQLLHGLKSN 152
                        C +   VP  +KAPI+IYY+L N++QNHRRY KS +++QL     + 
Sbjct: 121 KILDKDLDMDVNYCIIRFTVPSVLKAPIFIYYRLTNFFQNHRRYAKSVDEKQLQGVALTA 180

Query: 153 DT---SSCQP-EDSSNGLPIVPCGLIAWSLFNDTFKFIR---ESSELVVNRKNIAWKSDR 205
           D     +C P E + +  P  PCGLIA SLFNDTF  +R   ++S    + KNIAW SD+
Sbjct: 181 DEVKGGNCFPLEVNEDDKPYYPCGLIANSLFNDTFSSLRLLDDNSVYTFSTKNIAWASDK 240

Query: 206 NHKFGKQVY-------PFNFQNGTFIGGGSLDPSVP-LSDQEDLIVWMRTAALPSFRKMY 257
             +F K  Y       P N+        G  + ++P LS  E+L VWMRTA LP+F K+ 
Sbjct: 241 -RRFLKTNYSPDDVAPPPNWV--LRYPDGYTESNMPDLSTMENLQVWMRTAGLPTFSKLA 297

Query: 258 GRIEEDLDADDVIAVHLMNNYNTYSFGGKKKLVLSTSSWLGGKNDFLGVAYVFVGSSSII 317
            R + D        + +   +   SF G K LVL+T S LGGKN FLG+AY+ V +  ++
Sbjct: 298 MRNDNDDIFPGTYEIKIGLFFPVKSFDGTKSLVLTTRSVLGGKNPFLGIAYIVVSAVCVV 357

Query: 318 ISLVFMLLHVKNPRPYGETAYLSWN 342
           +  VF L H   PR   +  YL+W+
Sbjct: 358 LGTVFTLRHFIRPRKLADHRYLNWD 382

Has a role in meiosis.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q8BHG3|CC50B_MOUSE Cell cycle control protein 50B OS=Mus musculus GN=Tmem30b PE=2 SV=1

 Score =  179 bits (455), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/331 (35%), Positives = 171/331 (51%), Gaps = 40/331 (12%)

Query: 31  FTQQNLPACKPVLTPSWIVTTFLLMGVIFIPIGLVTLRTSHSVIEIVERY-------DTE 83
           FTQQ LPA +P+L+    +  F   G+ FI +GL    +S+ + E+   Y       D  
Sbjct: 18  FTQQRLPAWQPLLSAGIALPLFFCAGLAFIGLGLGLFYSSNGIKELEYDYTGNPGTGDCS 77

Query: 84  CIPEKFRGNKVSYIKDSTILKNCSLYLKVPKHMKAPIYIYYQLDNYYQNHRRYVKSRNDQ 143
               K +G      +       CS    +P+    P+Y+YY+L N+YQN+RRY  SR+D 
Sbjct: 78  VCAAKGQG------RAPPPGCACSWSFTLPELFPGPVYLYYELSNFYQNNRRYGVSRDDA 131

Query: 144 QLLHGLKS---NDTSSCQP-EDSSNGLPIVPCGLIAWSLFNDTFKFIRESS------ELV 193
           QL  GL S   +  + C P +  S+GLPI PCG IA SLFND+F    +        E+ 
Sbjct: 132 QL-SGLASALRHPANECAPYQFRSDGLPIAPCGAIANSLFNDSFSLWHQRQPSDPFVEVP 190

Query: 194 VNRKNIAWKSDRNHKFGKQVYPFNFQNGTFIGGG------------SLDPSVPLSDQEDL 241
           ++R  IAW +D + KF             F G              S DP+      +D 
Sbjct: 191 LDRTAIAWWTDYHVKFRNPPLVNGSLALAFRGTAPPPNWHRPVYELSPDPNNTGFINQDF 250

Query: 242 IVWMRTAALPSFRKMYGRIEEDLDADDV----IAVHLMNNYNTYSFGGKKKLVLSTSSWL 297
           +VWMRTAALP+FRK+Y RI +   +  +      V++  NY   +FGG K ++LS  SW+
Sbjct: 251 VVWMRTAALPTFRKLYARIRQGNYSAGLPRGTYRVNITYNYPVRAFGGHKLIILSNISWM 310

Query: 298 GGKNDFLGVAYVFVGSSSIIISLVFMLLHVK 328
           GGKN FLG+AY+ VGS  I++  V ++++++
Sbjct: 311 GGKNPFLGIAYLVVGSLCIVMGFVMLVVYIR 341

Mus musculus (taxid: 10090)

>sp|Q8VEK0|CC50A_MOUSE Cell cycle control protein 50A OS=Mus musculus GN=Tmem30a PE=1 SV=1

 Score =  175 bits (444), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 124/334 (37%), Positives = 188/334 (56%), Gaps = 50/334 (14%)

Query: 31  FTQQNLPACKPVLTPSWIVTTFLLMGVIFIPIGLVTLRTSHSVIEIVERYDTECIPEKFR 90
           F QQ LPA +P+LT   ++ TF ++G+IFIPIG+    TS+++ EI   Y          
Sbjct: 33  FKQQRLPAWQPILTAGTVLPTFFIIGLIFIPIGIGIFVTSNNIREIEIDY---------T 83

Query: 91  GNKVSYIKDSTILKN-----CSLYLKVPKHMKAPIYIYYQLDNYYQNHRRYVKSRNDQQL 145
           G + S   +  +  N     C++   + +  +  +++YY L N+YQNHRRYVKSR+D QL
Sbjct: 84  GTEPSSPCNKCLSPNVTSCACTINFTLKQSFEGNVFMYYGLSNFYQNHRRYVKSRDDSQL 143

Query: 146 LHGLKS---NDTSSCQPEDSSNGLPIVPCGLIAWSLFNDTFKFIRESSE-------LVVN 195
            +G  S   N +  C+P   +   PI PCG IA S+FNDT +    ++E       + + 
Sbjct: 144 -NGDPSALLNPSKECEPYRRNEDRPIAPCGAIANSMFNDTLELYLVANESDPKPIPIPLK 202

Query: 196 RKNIAWKSDRNHKF----GKQ---------VYPFNFQNGTFIGGGSLDPSVPLSD---QE 239
           +K IAW +D+N KF    GK+         + P N+    +     LDP    ++    E
Sbjct: 203 KKGIAWWTDKNVKFRNPPGKESLEEKFKDTIKPVNWHKAVY----ELDPEDESNNGFINE 258

Query: 240 DLIVWMRTAALPSFRKMYGRIE--EDLDADDVIAVHLMN---NYNTYSFGGKKKLVLSTS 294
           D IVWMRTAALP+FRK+Y  IE  +DL        + +N   NY  +SF G+K+++LST 
Sbjct: 259 DFIVWMRTAALPTFRKLYRLIERRDDLHPTLPAGQYFLNITYNYPVHSFDGRKRMILSTI 318

Query: 295 SWLGGKNDFLGVAYVFVGSSSIIISLVFMLLHVK 328
           SW+GGKN FLG+AY+ +GS S ++ +V ++++ K
Sbjct: 319 SWMGGKNPFLGIAYITIGSISFLLGVVLLVINHK 352

Mus musculus (taxid: 10090)

>sp|Q5F362|CC50A_CHICK Cell cycle control protein 50A OS=Gallus gallus GN=TMEM30A PE=2 SV=1

 Score =  174 bits (441), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 120/323 (37%), Positives = 180/323 (55%), Gaps = 29/323 (8%)

Query: 31  FTQQNLPACKPVLTPSWIVTTFLLMGVIFIPIGLVTLRTSHSVIEIVERYDTECIPEKFR 90
           F QQ LPA +P+LT   ++  F ++G+IFIPIG+    TS+++ E    Y T   P    
Sbjct: 42  FKQQRLPAWQPILTAGTVLPAFFIIGLIFIPIGIGIFVTSNNIREYEIDY-TGVEPSSPC 100

Query: 91  GNKVSYIKDSTILKNCSLYLKVPKHMKAPIYIYYQLDNYYQNHRRYVKSRNDQQLLHGLK 150
              ++   DST    C++   +    ++ +++YY L N+YQNHRRYVKSR+D QL     
Sbjct: 101 NKCLNVSWDSTPPCTCTINFTLEHSFESNVFMYYGLSNFYQNHRRYVKSRDDSQLNGDNS 160

Query: 151 S--NDTSSCQPEDSSNGLPIVPCGLIAWSLFNDTFKFIR----ESSELVVNRKNIAWKSD 204
           S  N +  C+P  ++   PI PCG IA S+FNDT +         + + + +K IAW +D
Sbjct: 161 SLLNPSKECEPYRTNEDKPIAPCGAIANSMFNDTLELYHIENDTRTAITLIKKGIAWWTD 220

Query: 205 RNHKFGKQVYPFNFQNGTFIGGGSLDP-----------SVPLSD---QEDLIVWMRTAAL 250
           +N KF     P    N T +  G+  P           S P ++    ED IVWMRTAAL
Sbjct: 221 KNVKFRN---PKGDGNLTALFQGTTKPVNWPKPVYMLDSEPDNNGFINEDFIVWMRTAAL 277

Query: 251 PSFRKMYGRIEEDLDADDVI-----AVHLMNNYNTYSFGGKKKLVLSTSSWLGGKNDFLG 305
           P+FRK+Y  IE   +    +     ++++  NY  +SF G+K+++LST SW+GGKN FLG
Sbjct: 278 PTFRKLYRLIERKSNLQPTLQAGKYSLNITYNYPVHSFDGRKRMILSTISWMGGKNPFLG 337

Query: 306 VAYVFVGSSSIIISLVFMLLHVK 328
           +AY+ VGS    + +V +++H K
Sbjct: 338 IAYITVGSICFFLGVVLLIIHHK 360

Gallus gallus (taxid: 9031)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	343
255587734	348	conserved hypothetical protein [Ricinus	1.0	0.985	0.769	1e-163
225443936	331	PREDICTED: putative ALA-interacting subu	0.965	1.0	0.761	1e-155
356530567	348	PREDICTED: putative ALA-interacting subu	1.0	0.985	0.766	1e-152
449433613	353	PREDICTED: putative ALA-interacting subu	0.997	0.968	0.670	1e-141
449490563	353	PREDICTED: LOW QUALITY PROTEIN: putative	0.997	0.968	0.667	1e-140
297791079	343	LEM3 (ligand-effect modulator 3) family	0.982	0.982	0.705	1e-139
18422638	343	putative ALA-interacting subunit 2 [Arab	0.982	0.982	0.705	1e-139
110737130	343	hypothetical protein [Arabidopsis thalia	0.982	0.982	0.705	1e-138
51970838	343	unknown protein [Arabidopsis thaliana]	0.982	0.982	0.702	1e-138
21554054	336	unknown [Arabidopsis thaliana]	0.935	0.955	0.719	1e-136

>gi|255587734|ref|XP_002534376.1| conserved hypothetical protein [Ricinus communis] gi|223525401|gb|EEF28000.1| conserved hypothetical protein [Ricinus communis]

 Score =  580 bits (1496), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 264/343 (76%), Positives = 305/343 (88%)

Query: 1   MEVEGGNTSANDAVARKIPIQSRRAKVFYQFTQQNLPACKPVLTPSWIVTTFLLMGVIFI 60
           M+ +G   S++    R IPI+SRR + FYQF QQ LPACKPVLTP+W+++TFLL+G +F+
Sbjct: 1   MDADGEGISSDSTAVRTIPIRSRRCEAFYQFKQQRLPACKPVLTPAWVISTFLLLGFVFL 60

Query: 61  PIGLVTLRTSHSVIEIVERYDTECIPEKFRGNKVSYIKDSTILKNCSLYLKVPKHMKAPI 120
           PIGLVTLR S  V+EIV+RYD +CIPE FRGNKVSYIKD+++ KNC+  LKV K+MKAPI
Sbjct: 61  PIGLVTLRASRDVVEIVDRYDIDCIPESFRGNKVSYIKDTSVPKNCTRVLKVHKYMKAPI 120

Query: 121 YIYYQLDNYYQNHRRYVKSRNDQQLLHGLKSNDTSSCQPEDSSNGLPIVPCGLIAWSLFN 180
           YIYYQLD+YYQNHRRYVKSR+DQQLLHGLK NDTSSC+PE+S+ GLPIVPCGLIAWSLFN
Sbjct: 121 YIYYQLDSYYQNHRRYVKSRSDQQLLHGLKYNDTSSCKPEESNKGLPIVPCGLIAWSLFN 180

Query: 181 DTFKFIRESSELVVNRKNIAWKSDRNHKFGKQVYPFNFQNGTFIGGGSLDPSVPLSDQED 240
           DT+ F+R  +EL VNRKNIAWKSDR HKFGK VYPFNFQNGT IGGG LDP  PLSDQED
Sbjct: 181 DTYTFVRGRAELSVNRKNIAWKSDREHKFGKHVYPFNFQNGTLIGGGKLDPHTPLSDQED 240

Query: 241 LIVWMRTAALPSFRKMYGRIEEDLDADDVIAVHLMNNYNTYSFGGKKKLVLSTSSWLGGK 300
           LIVWMRTAALPSFRK+YGRIEEDLDADDVI VHLMNNYNTYSFGG+KKLV+STSSWLGG+
Sbjct: 241 LIVWMRTAALPSFRKLYGRIEEDLDADDVILVHLMNNYNTYSFGGQKKLVISTSSWLGGR 300

Query: 301 NDFLGVAYVFVGSSSIIISLVFMLLHVKNPRPYGETAYLSWNR 343
           NDFLGVAY+FVGSS+II+SLVF+LLHV NPRPY +++YLSWN+
Sbjct: 301 NDFLGVAYIFVGSSAIILSLVFLLLHVNNPRPYRDSSYLSWNK 343

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225443936|ref|XP_002271780.1| PREDICTED: putative ALA-interacting subunit 2 [Vitis vinifera] gi|297740755|emb|CBI30937.3| unnamed protein product [Vitis vinifera]

 Score =  552 bits (1423), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 252/331 (76%), Positives = 290/331 (87%)

Query: 1   MEVEGGNTSANDAVARKIPIQSRRAKVFYQFTQQNLPACKPVLTPSWIVTTFLLMGVIFI 60
           M+ +GG+ SA     R + + S + +  YQFTQQ+LPACKPVLTP W++ TFLL+G IFI
Sbjct: 1   MDADGGSASAVGIEGRPVSLHSGQPRALYQFTQQSLPACKPVLTPGWVIATFLLIGAIFI 60

Query: 61  PIGLVTLRTSHSVIEIVERYDTECIPEKFRGNKVSYIKDSTILKNCSLYLKVPKHMKAPI 120
           P+GLV+L  S +V+EIVERYD ECIPEK++ NKV+YI+DS+I KNC+ YLKV KHMKAPI
Sbjct: 61  PVGLVSLHASQNVVEIVERYDAECIPEKYQSNKVAYIRDSSIPKNCTRYLKVHKHMKAPI 120

Query: 121 YIYYQLDNYYQNHRRYVKSRNDQQLLHGLKSNDTSSCQPEDSSNGLPIVPCGLIAWSLFN 180
            +YYQLDN+YQNHRRYVKSR+DQQLLHGLK NDTSSC+PE  +NGLPIVPCGLIAWSLFN
Sbjct: 121 SVYYQLDNFYQNHRRYVKSRSDQQLLHGLKYNDTSSCKPEQLNNGLPIVPCGLIAWSLFN 180

Query: 181 DTFKFIRESSELVVNRKNIAWKSDRNHKFGKQVYPFNFQNGTFIGGGSLDPSVPLSDQED 240
           DTF F+R S E+ +NRKNIAWKSDR+HKFGK+VYPFNFQNGT IGGG LDP +PLSDQED
Sbjct: 181 DTFNFVRRSEEMKINRKNIAWKSDRDHKFGKEVYPFNFQNGTLIGGGKLDPRIPLSDQED 240

Query: 241 LIVWMRTAALPSFRKMYGRIEEDLDADDVIAVHLMNNYNTYSFGGKKKLVLSTSSWLGGK 300
           LIVWMRTAALPSFRK+YGRIEED+DADDVI VHL NNYNTYSFGGKKKLVLSTSSWLGGK
Sbjct: 241 LIVWMRTAALPSFRKLYGRIEEDIDADDVIVVHLSNNYNTYSFGGKKKLVLSTSSWLGGK 300

Query: 301 NDFLGVAYVFVGSSSIIISLVFMLLHVKNPR 331
           N+FLG+AY+FVGSS I  S+VFMLLHVKNPR
Sbjct: 301 NNFLGIAYIFVGSSCIFTSIVFMLLHVKNPR 331

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356530567|ref|XP_003533852.1| PREDICTED: putative ALA-interacting subunit 2-like [Glycine max]

 Score =  543 bits (1398), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 263/343 (76%), Positives = 298/343 (86%)

Query: 1   MEVEGGNTSANDAVARKIPIQSRRAKVFYQFTQQNLPACKPVLTPSWIVTTFLLMGVIFI 60
           M+++GG +S     A+ IP +S R   FY+FTQQNLPACKPVLTP+ ++ TFLLMG IFI
Sbjct: 1   MDLDGGCSSTVSTGAQAIPGRSTRHGAFYRFTQQNLPACKPVLTPAAVIATFLLMGFIFI 60

Query: 61  PIGLVTLRTSHSVIEIVERYDTECIPEKFRGNKVSYIKDSTILKNCSLYLKVPKHMKAPI 120
           P+GLVTLR S+SV+EIV+RYD +C+PE FR NKV+YIKD +I KNCS  LKV K MKAPI
Sbjct: 61  PVGLVTLRASNSVVEIVDRYDIDCVPEDFRSNKVAYIKDDSIAKNCSRLLKVLKPMKAPI 120

Query: 121 YIYYQLDNYYQNHRRYVKSRNDQQLLHGLKSNDTSSCQPEDSSNGLPIVPCGLIAWSLFN 180
           YIYYQLDNYYQNHRRYVKSR+D QLLHGL  NDTSSC+P +SS+ LPIVPCGL+AWSLFN
Sbjct: 121 YIYYQLDNYYQNHRRYVKSRSDLQLLHGLGYNDTSSCKPLESSHNLPIVPCGLMAWSLFN 180

Query: 181 DTFKFIRESSELVVNRKNIAWKSDRNHKFGKQVYPFNFQNGTFIGGGSLDPSVPLSDQED 240
           DT+ F R  SEL VNRKNIAWKSDR+HKFG  VYPFNFQNGT IGGG LDPS+PL DQED
Sbjct: 181 DTYTFSRGPSELKVNRKNIAWKSDRDHKFGNHVYPFNFQNGTLIGGGKLDPSIPLGDQED 240

Query: 241 LIVWMRTAALPSFRKMYGRIEEDLDADDVIAVHLMNNYNTYSFGGKKKLVLSTSSWLGGK 300
           LIVWMRTAALP+FRK+YGRIEEDLDADDVI VHL NNYNTYSFGGKKKLVLSTSSWLGGK
Sbjct: 241 LIVWMRTAALPTFRKLYGRIEEDLDADDVIVVHLENNYNTYSFGGKKKLVLSTSSWLGGK 300

Query: 301 NDFLGVAYVFVGSSSIIISLVFMLLHVKNPRPYGETAYLSWNR 343
           NDFLGVA +FVG+  I+IS++F+LLHVKNPRPYG+TAYLSWNR
Sbjct: 301 NDFLGVANLFVGAFCILISIIFLLLHVKNPRPYGDTAYLSWNR 343

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449433613|ref|XP_004134592.1| PREDICTED: putative ALA-interacting subunit 2-like [Cucumis sativus]

 Score =  506 bits (1303), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 232/346 (67%), Positives = 287/346 (82%), Gaps = 4/346 (1%)

Query: 1   MEVEGGNTSANDAVARKIP---IQSRRAKVFYQFTQQNLPACKPVLTPSWIVTTFLLMGV 57
           M+++G ++      +  +P   +Q+RR   +Y+FTQQ+LPACKPVLTP+W+++ FLLMG+
Sbjct: 4   MDLDGSSSLVASEGSGSVPAGHVQARRHTAYYRFTQQSLPACKPVLTPTWVISIFLLMGI 63

Query: 58  IFIPIGLVTLRTSHSVIEIVERYDTECIPEKFRGNKVSYIKDSTILKNCSLYLKVPKHMK 117
           IF+P+G + L TSHSV EIV RYDTEC+P  ++ N V+YIKDS++ K CS  +KV K MK
Sbjct: 64  IFVPVGFLVLHTSHSVAEIVYRYDTECVPVSYKNNMVAYIKDSSVPKLCSFSIKVNKTMK 123

Query: 118 APIYIYYQLDNYYQNHRRYVKSRNDQQLLHGLKSNDTSSCQPEDSSNGLPIVPCGLIAWS 177
           APIYIYYQLDNYYQNHRRYVKSR+D+QLLHGL  NDTSSC+P  S NGLPIVPCGLIAWS
Sbjct: 124 APIYIYYQLDNYYQNHRRYVKSRSDKQLLHGLAYNDTSSCKPLQSHNGLPIVPCGLIAWS 183

Query: 178 LFNDTFKFIRESSELVVNRKNIAWKSDRNHKFGKQVYPFNFQNGTFIGGGSLDPSVPLSD 237
           LFNDT++F+   SEL V+RKNIAW SDR HKFGK VYPFNFQNG+ IGGG+LD ++PLSD
Sbjct: 184 LFNDTYRFVLGKSELKVDRKNIAWASDREHKFGKHVYPFNFQNGSLIGGGNLDRNIPLSD 243

Query: 238 QEDLIVWMRTAALPSFRKMYGRIEEDLDADDVIAVHLMNNYNTYSFGGKKKLVLSTSSWL 297
            EDLIVWMRTAALPSFRK+YGRIEEDL ADDV+ + +MNNYNTYSFGG KKLV+STSSWL
Sbjct: 244 HEDLIVWMRTAALPSFRKLYGRIEEDLHADDVLDIKIMNNYNTYSFGGTKKLVISTSSWL 303

Query: 298 GGKNDFLGVAYVFVGSSSIIISLVFMLLHVKNPRPYGETAYLSWNR 343
           GG+NDFLG AY+F+GSSS+++S+ F LLH+K+ RP+ E  + S N+
Sbjct: 304 GGRNDFLGCAYIFLGSSSLLVSIFFTLLHMKS-RPFREINFSSRNK 348

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449490563|ref|XP_004158641.1| PREDICTED: LOW QUALITY PROTEIN: putative ALA-interacting subunit 2-like [Cucumis sativus]

 Score =  504 bits (1297), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 231/346 (66%), Positives = 286/346 (82%), Gaps = 4/346 (1%)

Query: 1   MEVEGGNTSANDAVARKIP---IQSRRAKVFYQFTQQNLPACKPVLTPSWIVTTFLLMGV 57
           M+++G ++      +  +P   +Q+RR   +Y+FTQQ+LPACKPVLTP+W+++ FLLMG+
Sbjct: 4   MDLDGSSSLVASEGSGSVPAGHVQARRHTAYYRFTQQSLPACKPVLTPTWVISIFLLMGI 63

Query: 58  IFIPIGLVTLRTSHSVIEIVERYDTECIPEKFRGNKVSYIKDSTILKNCSLYLKVPKHMK 117
           IF+P+G + L TSHSV EIV RYDTEC+P  ++ N V+YIKDS++ K CS  +KV K MK
Sbjct: 64  IFVPVGFLVLHTSHSVAEIVYRYDTECVPVSYKNNMVAYIKDSSVPKLCSFSIKVNKTMK 123

Query: 118 APIYIYYQLDNYYQNHRRYVKSRNDQQLLHGLKSNDTSSCQPEDSSNGLPIVPCGLIAWS 177
           APIYIYYQLDNYYQNHRRYVKSR+D+QLLHGL  NDTSSC+P  S NGLPIVPCGLIAWS
Sbjct: 124 APIYIYYQLDNYYQNHRRYVKSRSDKQLLHGLAYNDTSSCKPLQSHNGLPIVPCGLIAWS 183

Query: 178 LFNDTFKFIRESSELVVNRKNIAWKSDRNHKFGKQVYPFNFQNGTFIGGGSLDPSVPLSD 237
           LFNDT++F+   SEL V+RKNIAW SDR HKFGK VYPFNFQNG+ IGGG+LD ++PLSD
Sbjct: 184 LFNDTYRFVLGKSELKVDRKNIAWASDREHKFGKHVYPFNFQNGSLIGGGNLDRNIPLSD 243

Query: 238 QEDLIVWMRTAALPSFRKMYGRIEEDLDADDVIAVHLMNNYNTYSFGGKKKLVLSTSSWL 297
            EDLIVWMRTAALPSFRK+YGRIEEDL ADDV+ + +MNNYNTYSFGG KKLV+STSSW 
Sbjct: 244 HEDLIVWMRTAALPSFRKLYGRIEEDLHADDVLDIKIMNNYNTYSFGGTKKLVISTSSWX 303

Query: 298 GGKNDFLGVAYVFVGSSSIIISLVFMLLHVKNPRPYGETAYLSWNR 343
           GG+NDFLG AY+F+GSSS+++S+ F LLH+K+ RP+ E  + S N+
Sbjct: 304 GGRNDFLGCAYIFLGSSSLLVSIFFTLLHMKS-RPFREINFSSRNK 348

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297791079|ref|XP_002863424.1| LEM3 (ligand-effect modulator 3) family protein [Arabidopsis lyrata subsp. lyrata] gi|297309259|gb|EFH39683.1| LEM3 (ligand-effect modulator 3) family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  499 bits (1286), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 242/343 (70%), Positives = 286/343 (83%), Gaps = 6/343 (1%)

Query: 1   MEVEGGNTSANDAVARKIPIQSRRAKVFYQFTQQNLPACKPVLTPSWIVTTFLLMGVIFI 60
           MEVEG   S N A  +   ++SRR+K  YQF QQ LPACKPVLTP  ++T F+LMG +FI
Sbjct: 2   MEVEG---SMNRAPDQSSFLRSRRSKALYQFKQQKLPACKPVLTPISVITVFMLMGFVFI 58

Query: 61  PIGLVTLRTSHSVIEIVERYDTECIPEKFRGNKVSYIKDSTILKNCSLYLKVPKHMKAPI 120
           PIGL+TLR S   IEI++RYD ECIPE++R NK+SYI DS+I KNC+ YLKV K+MKAPI
Sbjct: 59  PIGLITLRASRDAIEIIDRYDVECIPEEYRTNKLSYITDSSIPKNCTRYLKVQKYMKAPI 118

Query: 121 YIYYQLDNYYQNHRRYVKSRNDQQLLHGLKSNDTSSCQPEDSSNGLPIVPCGLIAWSLFN 180
           +IYYQLDNYYQNHRRYVKSR+DQQLLHGL+ + TSSC+PE+SSNGLPIVPCGLIAWS+FN
Sbjct: 119 FIYYQLDNYYQNHRRYVKSRSDQQLLHGLEYSHTSSCEPEESSNGLPIVPCGLIAWSMFN 178

Query: 181 DTFKFIRESSELVVNRKNIAWKSDRNHKFGKQVYPFNFQNGTFIGGGSLDPSVPLSDQED 240
           DTF F RE ++L V+R NIAWKSDR  KFGK VYP NFQNGT IGG  LDP +PLSDQED
Sbjct: 179 DTFTFSRERTKLKVSRNNIAWKSDREQKFGKNVYPVNFQNGTLIGGAKLDPKIPLSDQED 238

Query: 241 LIVWMRTAALPSFRKMYGRIEEDLDADDVIAVHLMNNYNTYSFGGKKKLVLSTSSWLGGK 300
            IVWMR AAL SFRK+YGRIEEDL+   V+ V+LMNNYNTYSF G+KKL+LSTS+WLGG+
Sbjct: 239 FIVWMRAAALLSFRKLYGRIEEDLEPGSVVEVNLMNNYNTYSFSGQKKLILSTSNWLGGR 298

Query: 301 NDFLGVAYVFVGSSSIIISLVFMLLHVKNPRPYGETAYLSWNR 343
           NDFLG+ Y+ VGSSSI+IS++FMLLH+KNPRPYG+    SWN+
Sbjct: 299 NDFLGITYLVVGSSSIVISIIFMLLHLKNPRPYGDN---SWNK 338

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18422638|ref|NP_568657.1| putative ALA-interacting subunit 2 [Arabidopsis thaliana] gi|30694892|ref|NP_851139.1| putative ALA-interacting subunit 2 [Arabidopsis thaliana] gi|75116611|sp|Q67YS6.1|ALIS2_ARATH RecName: Full=Putative ALA-interacting subunit 2; Short=AtALIS2 gi|51968732|dbj|BAD43058.1| unknown protein [Arabidopsis thaliana] gi|51970926|dbj|BAD44155.1| unknown protein [Arabidopsis thaliana] gi|51971485|dbj|BAD44407.1| unknown protein [Arabidopsis thaliana] gi|62320767|dbj|BAD95435.1| hypothetical protein [Arabidopsis thaliana] gi|90093270|gb|ABD85148.1| At5g46150 [Arabidopsis thaliana] gi|332007962|gb|AED95345.1| putative ALA-interacting subunit 2 [Arabidopsis thaliana] gi|332007963|gb|AED95346.1| putative ALA-interacting subunit 2 [Arabidopsis thaliana]

 Score =  499 bits (1284), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 242/343 (70%), Positives = 286/343 (83%), Gaps = 6/343 (1%)

Query: 1   MEVEGGNTSANDAVARKIPIQSRRAKVFYQFTQQNLPACKPVLTPSWIVTTFLLMGVIFI 60
           MEVEG   S N A  +   ++SRR+K  YQF QQ LPACKPVLTP  ++T F+LMG +FI
Sbjct: 2   MEVEG---SMNRAPDQSSFLRSRRSKALYQFKQQKLPACKPVLTPISVITVFMLMGFVFI 58

Query: 61  PIGLVTLRTSHSVIEIVERYDTECIPEKFRGNKVSYIKDSTILKNCSLYLKVPKHMKAPI 120
           PIGL+TLR S   IEI++RYD ECIPE++R NK+ YI DS+I KNC+ YLKV K+MKAPI
Sbjct: 59  PIGLITLRASRDAIEIIDRYDVECIPEEYRTNKLLYITDSSIPKNCTRYLKVQKYMKAPI 118

Query: 121 YIYYQLDNYYQNHRRYVKSRNDQQLLHGLKSNDTSSCQPEDSSNGLPIVPCGLIAWSLFN 180
           +IYYQLDNYYQNHRRYVKSR+DQQLLHGL+ + TSSC+PE+SSNGLPIVPCGLIAWS+FN
Sbjct: 119 FIYYQLDNYYQNHRRYVKSRSDQQLLHGLEYSHTSSCEPEESSNGLPIVPCGLIAWSMFN 178

Query: 181 DTFKFIRESSELVVNRKNIAWKSDRNHKFGKQVYPFNFQNGTFIGGGSLDPSVPLSDQED 240
           DTF F RE ++L V+R NIAWKSDR HKFGK VYP NFQNGT IGG  LDP +PLSDQED
Sbjct: 179 DTFTFSRERTKLNVSRNNIAWKSDREHKFGKNVYPINFQNGTLIGGAKLDPKIPLSDQED 238

Query: 241 LIVWMRTAALPSFRKMYGRIEEDLDADDVIAVHLMNNYNTYSFGGKKKLVLSTSSWLGGK 300
            IVWMR AAL SFRK+YGRIEEDL+   V+ V+LMNNYNTYSF G+KKL+LSTS+WLGG+
Sbjct: 239 FIVWMRAAALLSFRKLYGRIEEDLEPGKVVEVNLMNNYNTYSFSGQKKLILSTSNWLGGR 298

Query: 301 NDFLGVAYVFVGSSSIIISLVFMLLHVKNPRPYGETAYLSWNR 343
           NDFLG+ Y+ VGSSSI+IS++FMLLH+KNPRPYG+    SWN+
Sbjct: 299 NDFLGITYLVVGSSSIVISIIFMLLHLKNPRPYGDN---SWNK 338

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|110737130|dbj|BAF00516.1| hypothetical protein [Arabidopsis thaliana]

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 242/343 (70%), Positives = 285/343 (83%), Gaps = 6/343 (1%)

Query: 1   MEVEGGNTSANDAVARKIPIQSRRAKVFYQFTQQNLPACKPVLTPSWIVTTFLLMGVIFI 60
           MEVEG   S N A  +   ++SRR+K  YQF QQ LPACKPVLTP  ++T F+LMG +FI
Sbjct: 2   MEVEG---SMNRAPDQSSFLRSRRSKALYQFKQQKLPACKPVLTPISVITVFMLMGFVFI 58

Query: 61  PIGLVTLRTSHSVIEIVERYDTECIPEKFRGNKVSYIKDSTILKNCSLYLKVPKHMKAPI 120
           PIGL+TLR S   IEI++RYD ECIPE++R NK+ YI DS+I KNC+ YLKV K+MKAPI
Sbjct: 59  PIGLITLRASRDAIEIIDRYDVECIPEEYRTNKLLYITDSSIPKNCTRYLKVQKYMKAPI 118

Query: 121 YIYYQLDNYYQNHRRYVKSRNDQQLLHGLKSNDTSSCQPEDSSNGLPIVPCGLIAWSLFN 180
            IYYQLDNYYQNHRRYVKSR+DQQLLHGL+ + TSSC+PE+SSNGLPIVPCGLIAWS+FN
Sbjct: 119 LIYYQLDNYYQNHRRYVKSRSDQQLLHGLEYSHTSSCEPEESSNGLPIVPCGLIAWSMFN 178

Query: 181 DTFKFIRESSELVVNRKNIAWKSDRNHKFGKQVYPFNFQNGTFIGGGSLDPSVPLSDQED 240
           DTF F RE ++L V+R NIAWKSDR HKFGK VYP NFQNGT IGG  LDP +PLSDQED
Sbjct: 179 DTFTFSRERTKLNVSRNNIAWKSDREHKFGKNVYPINFQNGTLIGGAKLDPKIPLSDQED 238

Query: 241 LIVWMRTAALPSFRKMYGRIEEDLDADDVIAVHLMNNYNTYSFGGKKKLVLSTSSWLGGK 300
            IVWMR AAL SFRK+YGRIEEDL+   V+ V+LMNNYNTYSF G+KKL+LSTS+WLGG+
Sbjct: 239 FIVWMRAAALLSFRKLYGRIEEDLEPGKVVEVNLMNNYNTYSFSGQKKLILSTSNWLGGR 298

Query: 301 NDFLGVAYVFVGSSSIIISLVFMLLHVKNPRPYGETAYLSWNR 343
           NDFLG+ Y+ VGSSSI+IS++FMLLH+KNPRPYG+    SWN+
Sbjct: 299 NDFLGITYLVVGSSSIVISIIFMLLHLKNPRPYGDN---SWNK 338

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|51970838|dbj|BAD44111.1| unknown protein [Arabidopsis thaliana]

 Score =  496 bits (1276), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 241/343 (70%), Positives = 285/343 (83%), Gaps = 6/343 (1%)

Query: 1   MEVEGGNTSANDAVARKIPIQSRRAKVFYQFTQQNLPACKPVLTPSWIVTTFLLMGVIFI 60
           MEVEG   S N A  +   ++SRR+K  YQF QQ LPACKPVLTP  ++T F+LMG +FI
Sbjct: 2   MEVEG---SMNRAPDQSSFLRSRRSKALYQFKQQKLPACKPVLTPISVITVFMLMGFVFI 58

Query: 61  PIGLVTLRTSHSVIEIVERYDTECIPEKFRGNKVSYIKDSTILKNCSLYLKVPKHMKAPI 120
           PIGL+TLR S   IEI++RYD ECIPE++R NK+ YI DS+I KNC+ YLKV K+MKAPI
Sbjct: 59  PIGLITLRASRDAIEIIDRYDVECIPEEYRTNKLLYITDSSIPKNCTRYLKVQKYMKAPI 118

Query: 121 YIYYQLDNYYQNHRRYVKSRNDQQLLHGLKSNDTSSCQPEDSSNGLPIVPCGLIAWSLFN 180
           +IYYQLDNYYQNHRRYVKSR+DQQLLHGL+ + TSSC+PE+SSNGLPIVPCGLIAWS+FN
Sbjct: 119 FIYYQLDNYYQNHRRYVKSRSDQQLLHGLEYSHTSSCEPEESSNGLPIVPCGLIAWSMFN 178

Query: 181 DTFKFIRESSELVVNRKNIAWKSDRNHKFGKQVYPFNFQNGTFIGGGSLDPSVPLSDQED 240
           DTF F RE ++L V+R NIAWKSDR HKFGK VYP NFQNGT IGG  LDP +PLSDQED
Sbjct: 179 DTFTFSRERTKLNVSRNNIAWKSDREHKFGKNVYPINFQNGTLIGGAKLDPKIPLSDQED 238

Query: 241 LIVWMRTAALPSFRKMYGRIEEDLDADDVIAVHLMNNYNTYSFGGKKKLVLSTSSWLGGK 300
            IVWMR AAL SFRK+YG IEEDL+   V+ V+LMNNYNTYSF G+KKL+LSTS+WLGG+
Sbjct: 239 FIVWMRAAALLSFRKLYGGIEEDLEPGKVVEVNLMNNYNTYSFSGQKKLILSTSNWLGGR 298

Query: 301 NDFLGVAYVFVGSSSIIISLVFMLLHVKNPRPYGETAYLSWNR 343
           NDFLG+ Y+ VGSSSI+IS++FMLLH+KNPRPYG+    SWN+
Sbjct: 299 NDFLGITYLVVGSSSIVISIIFMLLHLKNPRPYGDN---SWNK 338

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21554054|gb|AAM63135.1| unknown [Arabidopsis thaliana]

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 233/324 (71%), Positives = 277/324 (85%), Gaps = 3/324 (0%)

Query: 20  IQSRRAKVFYQFTQQNLPACKPVLTPSWIVTTFLLMGVIFIPIGLVTLRTSHSVIEIVER 79
           ++SRR+K  YQF QQ LPACKPVLTP  ++T F+LMG +FIPIGL+TLR S   IEI++R
Sbjct: 11  LRSRRSKALYQFKQQKLPACKPVLTPISVITVFMLMGFVFIPIGLITLRASRDAIEIIDR 70

Query: 80  YDTECIPEKFRGNKVSYIKDSTILKNCSLYLKVPKHMKAPIYIYYQLDNYYQNHRRYVKS 139
           YD ECIPE++R NK+ YI DS+I KNC+ YLKV K+MKAPI+IYYQLDNYYQNHRRYVKS
Sbjct: 71  YDVECIPEEYRTNKLLYITDSSIPKNCTRYLKVQKYMKAPIFIYYQLDNYYQNHRRYVKS 130

Query: 140 RNDQQLLHGLKSNDTSSCQPEDSSNGLPIVPCGLIAWSLFNDTFKFIRESSELVVNRKNI 199
           R+DQQLLHGL+ + TSSC+PE+SSNGLPIVPCGLIAWS+FNDTF F RE ++L V+R NI
Sbjct: 131 RSDQQLLHGLEYSHTSSCEPEESSNGLPIVPCGLIAWSMFNDTFTFSRERTKLNVSRNNI 190

Query: 200 AWKSDRNHKFGKQVYPFNFQNGTFIGGGSLDPSVPLSDQEDLIVWMRTAALPSFRKMYGR 259
           AWKSDR HKFGK VYP NFQNGT IGG  LDP +PLSDQED IVWMR AAL SFRK+YGR
Sbjct: 191 AWKSDREHKFGKNVYPINFQNGTLIGGAKLDPKLPLSDQEDFIVWMRAAALLSFRKLYGR 250

Query: 260 IEEDLDADDVIAVHLMNNYNTYSFGGKKKLVLSTSSWLGGKNDFLGVAYVFVGSSSIIIS 319
           IEEDL+   V+ V+LMNNYNTYSF G+KKL+LSTS+WLGG+NDFLG+ Y+ VGSSS++IS
Sbjct: 251 IEEDLEPGKVVEVNLMNNYNTYSFSGQKKLILSTSNWLGGRNDFLGITYLVVGSSSVVIS 310

Query: 320 LVFMLLHVKNPRPYGETAYLSWNR 343
           ++FMLLH+KNPRPYG+    SWN+
Sbjct: 311 IIFMLLHLKNPRPYGDN---SWNK 331

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	343
TAIR|locus:2161453	343	AT5G46150 "AT5G46150" [Arabido	0.982	0.982	0.705	4.2e-134
TAIR|locus:2020018	349	AT1G54320 [Arabidopsis thalian	0.973	0.957	0.601	3.3e-111
TAIR|locus:2087695	350	ALIS1 "ALA-interacting subunit	0.962	0.942	0.6	6.1e-110
TAIR|locus:2206400	350	ALIS5 "ALA-interacting subunit	0.976	0.957	0.586	9e-109
TAIR|locus:2032780	336	AT1G16360 [Arabidopsis thalian	0.912	0.931	0.617	3e-108
DICTYBASE|DDB_G0276567	312	DDB_G0276567 "CDC50/LEM3 famil	0.833	0.916	0.419	3.6e-57
UNIPROTKB|E2R2Z8	361	TMEM30A "Uncharacterized prote	0.577	0.548	0.381	4.2e-53
UNIPROTKB|F1PKF1	454	TMEM30A "Uncharacterized prote	0.577	0.436	0.381	4.2e-53
UNIPROTKB|Q17QL5	361	TMEM30A "Uncharacterized prote	0.507	0.481	0.390	7.7e-52
MGI|MGI:106402	364	Tmem30a "transmembrane protein	0.507	0.478	0.380	9.9e-52

TAIR|locus:2161453 AT5G46150 "AT5G46150" [Arabidopsis thaliana (taxid:3702)]

 Score = 1314 (467.6 bits), Expect = 4.2e-134, P = 4.2e-134
 Identities = 242/343 (70%), Positives = 286/343 (83%)

Query:     1 MEVEGGNTSANDAVARKIPIQSRRAKVFYQFTQQNLPACKPVLTPSWIVTTFLLMGVIFI 60
             MEVEG   S N A  +   ++SRR+K  YQF QQ LPACKPVLTP  ++T F+LMG +FI
Sbjct:     2 MEVEG---SMNRAPDQSSFLRSRRSKALYQFKQQKLPACKPVLTPISVITVFMLMGFVFI 58

Query:    61 PIGLVTLRTSHSVIEIVERYDTECIPEKFRGNKVSYIKDSTILKNCSLYLKVPKHMKAPI 120
             PIGL+TLR S   IEI++RYD ECIPE++R NK+ YI DS+I KNC+ YLKV K+MKAPI
Sbjct:    59 PIGLITLRASRDAIEIIDRYDVECIPEEYRTNKLLYITDSSIPKNCTRYLKVQKYMKAPI 118

Query:   121 YIYYQLDNYYQNHRRYVKSRNDQQLLHGLKSNDTSSCQPEDSSNGLPIVPCGLIAWSLFN 180
             +IYYQLDNYYQNHRRYVKSR+DQQLLHGL+ + TSSC+PE+SSNGLPIVPCGLIAWS+FN
Sbjct:   119 FIYYQLDNYYQNHRRYVKSRSDQQLLHGLEYSHTSSCEPEESSNGLPIVPCGLIAWSMFN 178

Query:   181 DTFKFIRESSELVVNRKNIAWKSDRNHKFGKQVYPFNFQNGTFIGGGSLDPSVPLSDQED 240
             DTF F RE ++L V+R NIAWKSDR HKFGK VYP NFQNGT IGG  LDP +PLSDQED
Sbjct:   179 DTFTFSRERTKLNVSRNNIAWKSDREHKFGKNVYPINFQNGTLIGGAKLDPKIPLSDQED 238

Query:   241 LIVWMRTAALPSFRKMYGRIEEDLDADDVIAVHLMNNYNTYSFGGKKKLVLSTSSWLGGK 300
              IVWMR AAL SFRK+YGRIEEDL+   V+ V+LMNNYNTYSF G+KKL+LSTS+WLGG+
Sbjct:   239 FIVWMRAAALLSFRKLYGRIEEDLEPGKVVEVNLMNNYNTYSFSGQKKLILSTSNWLGGR 298

Query:   301 NDFLGVAYVFVGSSSIIISLVFMLLHVKNPRPYGETAYLSWNR 343
             NDFLG+ Y+ VGSSSI+IS++FMLLH+KNPRPYG+    SWN+
Sbjct:   299 NDFLGITYLVVGSSSIVISIIFMLLHLKNPRPYGDN---SWNK 338

GO:0003674 "molecular_function" evidence=ND

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2020018 AT1G54320 [Arabidopsis thaliana (taxid:3702)]

 Score = 1098 (391.6 bits), Expect = 3.3e-111, P = 3.3e-111
 Identities = 204/339 (60%), Positives = 254/339 (74%)

Query:     5 GGNTSANDAVARKIPIQSRRAKVFYQFTQQNLPACKPVLTPSWIVTTFLLMGVIFIPIGL 64
             G   S + + ARK    S+R K + +FTQQ LPACKP+LTP W+++TFL++ VIFIP+G+
Sbjct:    11 GAAGSGDSSAARK---NSKRPK-YSKFTQQELPACKPILTPGWVISTFLIVSVIFIPLGV 66

Query:    65 VTLRTSHSVIEIVERYDTECIPEKFRGNKVSYIKDSTILKNCSLYLKVPKHMKAPIYIYY 124
             ++L  S  V+EIV+RYDTECIP   R NKV+YI+     K C+  LKV K MK PIY+YY
Sbjct:    67 ISLFASQDVVEIVDRYDTECIPAPARTNKVAYIQGDGD-KVCNRDLKVTKRMKQPIYVYY 125

Query:   125 QLDNYYQNHRRYVKSRNDQQLLHGLKSNDTSSCQPEDSSNGLPIVPCGLIAWSLFNDTFK 184
             QL+N+YQNHRRYVKSR+D QL      N  S+C+PED   G PIVPCGLIAWSLFNDT+ 
Sbjct:   126 QLENFYQNHRRYVKSRSDSQLRSTKYENQISACKPEDDVGGQPIVPCGLIAWSLFNDTYA 185

Query:   185 FIRESSELVVNRKNIAWKSDRNHKFGKQVYPFNFQNGTFIGGGSLDPSVPLSDQEDLIVW 244
               R +  L VN+K IAWKSD+ HKFG +V+P NFQ G   GG +LDP +PLS+QEDLIVW
Sbjct:   186 LSRNNVSLAVNKKGIAWKSDKEHKFGNKVFPKNFQKGNITGGATLDPRIPLSEQEDLIVW 245

Query:   245 MRTAALPSFRKMYGRIEEDLDADDVIAVHLMNNYNTYSFGGKKKLVLSTSSWLGGKNDFL 304
             MRTAALP+FRK+YG+IE DL+  D I V L NNYNTYSF GKKKLVLST+SWLGGKNDFL
Sbjct:   246 MRTAALPTFRKLYGKIESDLEMGDTIHVKLNNNYNTYSFNGKKKLVLSTTSWLGGKNDFL 305

Query:   305 GVAYVFVGSSSIIISLVFMLLHVKNPRPYGETAYLSWNR 343
             G+AY+ VG    I++L F ++++  PR  G+ +YLSWNR
Sbjct:   306 GIAYLTVGGICFILALAFTIMYLVKPRRLGDPSYLSWNR 344

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

TAIR|locus:2087695 ALIS1 "ALA-interacting subunit 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1086 (387.4 bits), Expect = 6.1e-110, P = 6.1e-110
 Identities = 201/335 (60%), Positives = 252/335 (75%)

Query:     9 SANDAVARKIPIQSRRAKVFYQFTQQNLPACKPVLTPSWIVTTFLLMGVIFIPIGLVTLR 68
             S + + AR+    S+R K + +FTQQ LPACKP+LTP W+++TFL++ VIFIP+G+++L 
Sbjct:    16 SIDSSAARR---NSKRPK-YSKFTQQELPACKPILTPGWVISTFLIISVIFIPLGVISLF 71

Query:    69 TSHSVIEIVERYDTECIPEKFRGNKVSYIKDSTILKNCSLYLKVPKHMKAPIYIYYQLDN 128
              S  V+EIV+RYD+ CIP   R NKV+YI+  T  K+C+  L VPK MK PIY+YYQL+N
Sbjct:    72 ASQDVVEIVDRYDSACIPLSDRANKVAYIQ-GTGNKSCTRTLIVPKRMKQPIYVYYQLEN 130

Query:   129 YYQNHRRYVKSRNDQQLLHGLKSNDTSSCQPEDSSNGLPIVPCGLIAWSLFNDTFKFIRE 188
             +YQNHRRYVKSR+D QL      N   +C+PED   G PIVPCGLIAWSLFNDT+   R 
Sbjct:   131 FYQNHRRYVKSRSDSQLRSVKDENQIDACKPEDDFGGQPIVPCGLIAWSLFNDTYVLSRN 190

Query:   189 SSELVVNRKNIAWKSDRNHKFGKQVYPFNFQNGTFIGGGSLDPSVPLSDQEDLIVWMRTA 248
             +  L VN+K IAWKSD+ HKFGK V+P NFQ G   GG SLDP+ PLSDQEDLIVWMRTA
Sbjct:   191 NQGLTVNKKGIAWKSDKEHKFGKNVFPKNFQKGNLTGGASLDPNKPLSDQEDLIVWMRTA 250

Query:   249 ALPSFRKMYGRIEEDLDADDVIAVHLMNNYNTYSFGGKKKLVLSTSSWLGGKNDFLGVAY 308
             ALP+FRK+YG+IE DL+  + I V L NNYNTYSF GKKKLVLST+SWLGGKNDFLG+AY
Sbjct:   251 ALPTFRKLYGKIESDLEKGENIQVTLQNNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAY 310

Query:   309 VFVGSSSIIISLVFMLLHVKNPRPYGETAYLSWNR 343
             + VG    +++L F ++++  PR  G+  YLSWNR
Sbjct:   311 LTVGGICFVLALAFTVMYLVKPRRLGDPTYLSWNR 345

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0016020 "membrane" evidence=ISS

GO:0015914 "phospholipid transport" evidence=IDA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

TAIR|locus:2206400 ALIS5 "ALA-interacting subunit 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 1075 (383.5 bits), Expect = 9.0e-109, P = 9.0e-109
 Identities = 200/341 (58%), Positives = 255/341 (74%)

Query:     3 VEGGNTSANDAVARKIPIQSRRAKVFYQFTQQNLPACKPVLTPSWIVTTFLLMGVIFIPI 62
             V GG +S    V +     S+R K + +FTQQ LPACKP+LTP W++ TFL+ GV+FIP+
Sbjct:    10 VGGGGSSEISGVKKT----SKRPK-YSRFTQQELPACKPILTPRWVILTFLVAGVVFIPL 64

Query:    63 GLVTLRTSHSVIEIVERYDTECIPEKFRGNKVSYIKDSTILKNCSLYLKVPKHMKAPIYI 122
             G++ L  S  V+EIV+RYDT+CIP   R N V+YI+     K C   + V K MK P+Y+
Sbjct:    65 GVICLFASQGVVEIVDRYDTDCIPTSSRNNMVAYIQGEGD-KICKRTITVTKAMKHPVYV 123

Query:   123 YYQLDNYYQNHRRYVKSRNDQQLLHGLKSNDTSSCQPEDSSNGLPIVPCGLIAWSLFNDT 182
             YYQL+N+YQNHRRYVKSRND QL    + +D  +C PED+  G PIVPCGL+AWSLFNDT
Sbjct:   124 YYQLENFYQNHRRYVKSRNDAQLRSPKEEHDVKTCAPEDNVGGEPIVPCGLVAWSLFNDT 183

Query:   183 FKFIRESSELVVNRKNIAWKSDRNHKFGKQVYPFNFQNGTFIGGGSLDPSVPLSDQEDLI 242
             + F R S +L+VN+K I+WKSDR +KFGK V+P NFQ G  IGGG+L+ S PLS+QEDLI
Sbjct:   184 YSFSRNSQQLLVNKKGISWKSDRENKFGKNVFPKNFQKGAPIGGGTLNISKPLSEQEDLI 243

Query:   243 VWMRTAALPSFRKMYGRIEEDLDADDVIAVHLMNNYNTYSFGGKKKLVLSTSSWLGGKND 302
             VWMRTAALP+FRK+YG+IE DL A D I V L NNYNTYSF G+KKLVLST+SWLGG+ND
Sbjct:   244 VWMRTAALPTFRKLYGKIETDLHAGDTITVLLQNNYNTYSFNGQKKLVLSTTSWLGGRND 303

Query:   303 FLGVAYVFVGSSSIIISLVFMLLHVKNPRPYGETAYLSWNR 343
             FLG+AY+ VGS  + +++ F +L++  PR  G+ +YLSWNR
Sbjct:   304 FLGIAYLTVGSICLFLAVTFAVLYLVKPRQLGDPSYLSWNR 344

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

GO:0009543 "chloroplast thylakoid lumen" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0006865 "amino acid transport" evidence=RCA

TAIR|locus:2032780 AT1G16360 [Arabidopsis thaliana (taxid:3702)]

 Score = 1070 (381.7 bits), Expect = 3.0e-108, P = 3.0e-108
 Identities = 194/314 (61%), Positives = 242/314 (77%)

Query:    30 QFTQQNLPACKPVLTPSWIVTTFLLMGVIFIPIGLVTLRTSHSVIEIVERYDTECIPEKF 89
             +FTQQ LPACKP+LTP W++ TFL+ GV+FIP+G++ L  S  VIEIV+RYDT+CIP   
Sbjct:    18 RFTQQELPACKPILTPKWVILTFLVSGVVFIPLGVICLFASQGVIEIVDRYDTDCIPLSS 77

Query:    90 RGNKVSYIKDSTILKNCSLYLKVPKHMKAPIYIYYQLDNYYQNHRRYVKSRNDQQLLHGL 149
             R NKV YI+     K C+  + V K MK P+Y+YYQL+NYYQNHRRYVKSR D QL    
Sbjct:    78 RDNKVRYIQGLED-KRCNRTITVTKTMKNPVYVYYQLENYYQNHRRYVKSRQDGQLRSPK 136

Query:   150 KSNDTSSCQPEDSSNGLPIVPCGLIAWSLFNDTFKFIRESSELVVNRKNIAWKSDRNHKF 209
               ++T SC PED+  G PIVPCGL+AWSLFNDT+ F R + +L VN+K+I+WKSDR  KF
Sbjct:   137 DEHETKSCAPEDTLGGQPIVPCGLVAWSLFNDTYDFTRNNQKLPVNKKDISWKSDRESKF 196

Query:   210 GKQVYPFNFQNGTFIGGGSLDPSVPLSDQEDLIVWMRTAALPSFRKMYGRIEEDLDADDV 269
             GK V+P NFQ G+ IGG SLD  +PLS+QEDLIVWMRTAALP+FRK+YG+I+ DL A D 
Sbjct:   197 GKNVFPKNFQKGSLIGGKSLDQDIPLSEQEDLIVWMRTAALPTFRKLYGKIDTDLQAGDT 256

Query:   270 IAVHLMNNYNTYSFGGKKKLVLSTSSWLGGKNDFLGVAYVFVGSSSIIISLVFMLLHVKN 329
             I V L NNYNTYSF GKKKLVLST+SWLGG+NDFLG+AY+ VGS  + +++ F +L++  
Sbjct:   257 IKVLLQNNYNTYSFNGKKKLVLSTTSWLGGRNDFLGIAYLTVGSICLFLAVSFSVLYLAK 316

Query:   330 PRPYGETAYLSWNR 343
             PR  G+ +YLSWNR
Sbjct:   317 PRQLGDPSYLSWNR 330

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

DICTYBASE|DDB_G0276567 DDB_G0276567 "CDC50/LEM3 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 588 (212.0 bits), Expect = 3.6e-57, P = 3.6e-57
 Identities = 136/324 (41%), Positives = 190/324 (58%)

Query:    31 FTQQNLPACKPVLTPSWIVTTFLLMGVIFIPIGLVTLRTSHSVIEIVERYDTECIPEKFR 90
             F QQ L A +P+LTP  ++  F+++G++FIPIG   + +S+ V+E V RYD    P    
Sbjct:    16 FKQQRLKAWEPILTPGPVIIAFIVIGIVFIPIGAAIINSSNKVLEHVIRYDDN--PNCQL 73

Query:    91 GNKVSYIKDSTILKNCSLYLKVPKHMKAPIYIYYQLDNYYQNHRRYVKSRNDQQLLHGLK 150
             G K            C++   +P  M++P+Y+YY+LDN+YQNHRRYVKSRND QL  G++
Sbjct:    74 GQK------------CTINYTLPTEMESPVYLYYKLDNFYQNHRRYVKSRNDDQL-RGIE 120

Query:   151 SNDTSS---CQPEDSSNGLP-----IVPCGLIAWSLFNDTFKFIRESSELV-VNRKNIAW 201
               D S    C+P  +++G       +VPCGLIA S+FND+      S  L+ + +K IAW
Sbjct:   121 VTDFSKLKDCEPLITTDGSEDVNKILVPCGLIANSVFNDSISLADASGNLINLTKKGIAW 180

Query:   202 KSDRNHKFGKQVYPFNFQNGTFIGGGSLDPSVPLSDQEDLIVWMRTAALPSFRKMYGRIE 261
             +SD + KF    YP   +NG     G ++ S    + ED IVWMRTAALP F+K+Y RI 
Sbjct:   181 QSDIDKKFKN--YP---ENGV----GVINFSN--FEDEDFIVWMRTAALPDFKKLY-RIY 228

Query:   262 EDLDA--DDVIAVHLMNNYNTYSFGGKKKLVLSTSSWLGGKNDFLGVAYVFVGSSSIIIS 319
                +      I + + N Y   SF GKK +VLST+SW+GGKN FLG AY+ VG    +  
Sbjct:   229 HGQNGPLSGTIQIRIDNKYPVASFDGKKYVVLSTTSWIGGKNPFLGYAYIIVGIICFVQG 288

Query:   320 LVFMLLHVKNPRPYGETAYLSWNR 343
             +VF + H  +PR  G   YL WN+
Sbjct:   289 VVFAIKHKISPRVLGSPKYLEWNK 312

GO:0016020 "membrane" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

UNIPROTKB|E2R2Z8 TMEM30A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 315 (115.9 bits), Expect = 4.2e-53, Sum P(2) = 4.2e-53
 Identities = 82/215 (38%), Positives = 120/215 (55%)

Query:     2 EVEGGNTSANDAVARKIPIQSRRAKVFYQFTQQNLPACKPVLTPSWIVTTFLLMGVIFIP 61
             EV+GG   A  A A+     +RR      F QQ LPA +P+LT   ++ TF ++G+IFIP
Sbjct:    10 EVDGGPPCAPGATAK-----NRRPDNT-AFKQQRLPAWQPILTAGTVLPTFFIIGLIFIP 63

Query:    62 IGLVTLRTSHSVIEIVERYDTECIPEKFRGNKVSYIKDSTILKNCSLYLKVPKHMKAPIY 121
             IG+    TS+++ EI   Y T   P     NK   +  +     C++   + +  +  ++
Sbjct:    64 IGIGIFVTSNNIREIEIDY-TGTDPSS-PCNKC--LSPNVTPCICTINFTLEQSFEGNVF 119

Query:   122 IYYQLDNYYQNHRRYVKSRNDQQLL--HGLKSNDTSSCQPEDSSNGLPIVPCGLIAWSLF 179
             +YY L N+YQNHRRYVKSR+D QL    G   N +  C+P   +   PI PCG IA S+F
Sbjct:   120 MYYGLSNFYQNHRRYVKSRDDSQLNGDSGALLNPSKECEPYRRNEDKPIAPCGAIANSMF 179

Query:   180 NDTFK-FI--RES--SELVVNRKNIAWKSDRNHKF 209
             NDT + F+   ES  + + + +K IAW +D+N KF
Sbjct:   180 NDTLELFLVGNESYPTPIPLKKKGIAWWTDKNVKF 214

GO:0070863 "positive regulation of protein exit from endoplasmic reticulum" evidence=IEA

GO:0036010 "protein localization to endosome" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|F1PKF1 TMEM30A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 315 (115.9 bits), Expect = 4.2e-53, Sum P(2) = 4.2e-53
 Identities = 82/215 (38%), Positives = 120/215 (55%)

Query:     2 EVEGGNTSANDAVARKIPIQSRRAKVFYQFTQQNLPACKPVLTPSWIVTTFLLMGVIFIP 61
             EV+GG   A  A A+     +RR      F QQ LPA +P+LT   ++ TF ++G+IFIP
Sbjct:   103 EVDGGPPCAPGATAK-----NRRPDNT-AFKQQRLPAWQPILTAGTVLPTFFIIGLIFIP 156

Query:    62 IGLVTLRTSHSVIEIVERYDTECIPEKFRGNKVSYIKDSTILKNCSLYLKVPKHMKAPIY 121
             IG+    TS+++ EI   Y T   P     NK   +  +     C++   + +  +  ++
Sbjct:   157 IGIGIFVTSNNIREIEIDY-TGTDPSS-PCNKC--LSPNVTPCICTINFTLEQSFEGNVF 212

Query:   122 IYYQLDNYYQNHRRYVKSRNDQQLL--HGLKSNDTSSCQPEDSSNGLPIVPCGLIAWSLF 179
             +YY L N+YQNHRRYVKSR+D QL    G   N +  C+P   +   PI PCG IA S+F
Sbjct:   213 MYYGLSNFYQNHRRYVKSRDDSQLNGDSGALLNPSKECEPYRRNEDKPIAPCGAIANSMF 272

Query:   180 NDTFK-FI--RES--SELVVNRKNIAWKSDRNHKF 209
             NDT + F+   ES  + + + +K IAW +D+N KF
Sbjct:   273 NDTLELFLVGNESYPTPIPLKKKGIAWWTDKNVKF 307

GO:0070863 "positive regulation of protein exit from endoplasmic reticulum" evidence=IEA

GO:0036010 "protein localization to endosome" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|Q17QL5 TMEM30A "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 306 (112.8 bits), Expect = 7.7e-52, Sum P(2) = 7.7e-52
 Identities = 73/187 (39%), Positives = 109/187 (58%)

Query:    31 FTQQNLPACKPVLTPSWIVTTFLLMGVIFIPIGLVTLRTSHSVIEIVERYDTECIPEKFR 90
             F QQ LPA +P+LT   ++ TF ++G+IFIPIG+    TS+++ EI   Y T   P    
Sbjct:    33 FKQQRLPAWQPILTAGTVLPTFFIIGLIFIPIGIGIFVTSNNIREIEIDY-TGTDPSS-P 90

Query:    91 GNKVSYIKDSTILKNCSLYLKVPKHMKAPIYIYYQLDNYYQNHRRYVKSRNDQQLLHGLK 150
              NK   +  +     C++   + +  +  +++YY L N+YQNHRRYVKSR+D QL +G  
Sbjct:    91 CNKC--LSPNVTPCVCTINFTLEQSFEGNVFMYYGLSNFYQNHRRYVKSRDDGQL-NGDP 147

Query:   151 S---NDTSSCQPEDSSNGLPIVPCGLIAWSLFNDTFKFIR--ESSELV---VNRKNIAWK 202
             S   N +  C+P   +   PI PCG IA S+FNDT +  +   +S+L    + +K IAW 
Sbjct:   148 SALLNPSKECEPYRRNEDKPIAPCGAIANSMFNDTLELFQVGNASDLTPIPLKKKGIAWW 207

Query:   203 SDRNHKF 209
             +D+N KF
Sbjct:   208 TDKNVKF 214

GO:0070863 "positive regulation of protein exit from endoplasmic reticulum" evidence=IEA

GO:0036010 "protein localization to endosome" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:106402 Tmem30a "transmembrane protein 30A" [Mus musculus (taxid:10090)]

 Score = 303 (111.7 bits), Expect = 9.9e-52, Sum P(2) = 9.9e-52
 Identities = 72/189 (38%), Positives = 108/189 (57%)

Query:    31 FTQQNLPACKPVLTPSWIVTTFLLMGVIFIPIGLVTLRTSHSVIEIVERYDTECIPEKFR 90
             F QQ LPA +P+LT   ++ TF ++G+IFIPIG+    TS+++ EI   Y T   P    
Sbjct:    33 FKQQRLPAWQPILTAGTVLPTFFIIGLIFIPIGIGIFVTSNNIREIEIDY-TGTEPSS-P 90

Query:    91 GNKVSYIKDSTILKNCSLYLKVPKHMKAPIYIYYQLDNYYQNHRRYVKSRNDQQLLHGLK 150
              NK   +  +     C++   + +  +  +++YY L N+YQNHRRYVKSR+D QL +G  
Sbjct:    91 CNKC--LSPNVTSCACTINFTLKQSFEGNVFMYYGLSNFYQNHRRYVKSRDDSQL-NGDP 147

Query:   151 S---NDTSSCQPEDSSNGLPIVPCGLIAWSLFNDTFKFIRESSE-------LVVNRKNIA 200
             S   N +  C+P   +   PI PCG IA S+FNDT +    ++E       + + +K IA
Sbjct:   148 SALLNPSKECEPYRRNEDRPIAPCGAIANSMFNDTLELYLVANESDPKPIPIPLKKKGIA 207

Query:   201 WKSDRNHKF 209
             W +D+N KF
Sbjct:   208 WWTDKNVKF 216

GO:0003674 "molecular_function" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0031175 "neuron projection development" evidence=ISO

GO:0036010 "protein localization to endosome" evidence=ISO

GO:0070863 "positive regulation of protein exit from endoplasmic reticulum" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P53740	YN8S_YEAST	No assigned EC number	0.3165	0.9241	0.8066	yes	no
Q67YS6	ALIS2_ARATH	No assigned EC number	0.7055	0.9825	0.9825	yes	no
Q8BHG3	CC50B_MOUSE	No assigned EC number	0.3504	0.8483	0.8243	yes	no
Q1MTQ5	MUG89_SCHPO	No assigned EC number	0.3506	0.9737	0.8434	yes	no
Q3MIR4	CC50B_HUMAN	No assigned EC number	0.3595	0.8483	0.8290	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00028338001 SubName- Full=Chromosome chr10 scaffold_43, whole genome shotgun sequence; (312 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	343
pfam03381	275	pfam03381, CDC50, LEM3 (ligand-effect modulator 3)	1e-106
COG5035	372	COG5035, CDC50, Cell cycle control protein [Cell d	6e-72

>gnl|CDD|217523 pfam03381, CDC50, LEM3 (ligand-effect modulator 3) family / CDC50 family

 Score =  311 bits (799), Expect = e-106
 Identities = 117/278 (42%), Positives = 160/278 (57%), Gaps = 15/278 (5%)

Query: 67  LRTSHSVIEIVERYDTECIPEKFRGNKVSYIKDSTILKNCSLYLKVPKHMKAPIYIYYQL 126
           L  S++V EI  RYD  C               + I   C++   +P+ MK P+Y YYQL
Sbjct: 2   LVASNNVQEIEIRYDDCCTA-----APEIGESFAEIPSTCTITFTIPEDMKGPVYFYYQL 56

Query: 127 DNYYQNHRRYVKSRNDQQLLHGLKSNDTSSCQPE--DSSNGLPIVPCGLIAWSLFNDTFK 184
            N+YQNHRRYVKSR+D QL     S D ++C+P   +  NG PI PCGLIA S+FNDTF 
Sbjct: 57  TNFYQNHRRYVKSRSDDQLRGKAVSGDDNNCEPLRSNDYNGKPIAPCGLIANSMFNDTFS 116

Query: 185 FIRESS---ELVVNRKNIAWKSDRNHKFGKQVYPFNFQNGT--FIGGGSLDPSVP-LSDQ 238
               ++    + +++K IAW SD+  KF    Y  +       +      D ++P     
Sbjct: 117 LPLANNGTTNVTLDKKGIAWSSDKEKKFKNTKYNPSGTVPPPNWKPNYEDDHTIPDNQTN 176

Query: 239 EDLIVWMRTAALPSFRKMYGRIE-EDLDADDVIAVHLMNNYNTYSFGGKKKLVLSTSSWL 297
           ED IVWMRTAALP+FRK+Y RI+  DL A     + + NNY   SF GKK +VLST+SW 
Sbjct: 177 EDFIVWMRTAALPTFRKLYRRIDATDLPAGT-YTIQIENNYPVSSFNGKKSIVLSTTSWF 235

Query: 298 GGKNDFLGVAYVFVGSSSIIISLVFMLLHVKNPRPYGE 335
           GGKN FLG+AY+ VG    ++ ++F++ H+  PR  G+
Sbjct: 236 GGKNPFLGIAYLVVGGICFLLGILFLIRHLFKPRKLGD 273

Members of this family have been predicted to contain transmembrane helices. The family member LEM3 is a ligand-effect modulator, mutation of which increases glucocorticoid receptor activity in response to dexamethasone and also confers increased activity on other intracellular receptors including the progesterone, oestrogen and mineralocorticoid receptors. LEM3 is thought to affect a downstream step in the glucocorticoid receptor pathway. Factors that modulate ligand responsiveness are likely to contribute to the context-specific actions of the glucocorticoid receptor in mammalian cells. The products of genes YNR048w, YNL323w and YCR094w (CDC50) show redundancy of function and are involved in regulation of transcription via CDC39. CDC39 (also known as NOT1) is normally a negative regulator of transcription either by affecting the general RNA polymerase II machinery or by altering chromatin structure. One function of CDC39 is to block activation of the mating response pathway in the absence of pheromone, and mutation causes arrest in G1 by activation of the pathway. It may be that the cold-sensitive arrest in G1 noticed in CDC50 mutants may be due to inactivation of CDC39. The effects of LEM3 on glucocorticoid receptor activity may also be due to effects on transcription via CDC39. Length = 275

>gnl|CDD|227368 COG5035, CDC50, Cell cycle control protein [Cell division and chromosome partitioning / Transcription / Signal transduction mechanisms]

 Score =  227 bits (581), Expect = 6e-72
 Identities = 127/370 (34%), Positives = 191/370 (51%), Gaps = 47/370 (12%)

Query: 13  AVARKIPIQSRRAKVFYQFTQQNLPACKPVLTPSWIVTTFLLMGVIFIPIGLVTLRTSHS 72
           A+  K  +   R      F QQ L A +P+L+P  ++    L+G++F P+G   L  S S
Sbjct: 10  AIVSKPSLLKSRRPPNTAFRQQRLKAWQPILSPRTVLPLLFLIGIVFAPLGGGLLVASSS 69

Query: 73  VIEIVERYDTEC----------IPEKF-------RGNKVSYIKDSTILKN----CSLYLK 111
           V E+   Y T+C          IP ++       + N +   + ST  ++    C +   
Sbjct: 70  VQELTIDY-TDCMTLASDEFSDIPSEYIQFHFKKKVNVLPQWRFSTDEEDDFQKCQIRFT 128

Query: 112 VPKHMKAPIYIYYQLDNYYQNHRRYVKSRNDQQLL-HGLKSNDT-SSCQPEDSSNGLPIV 169
           VP  MK P++IYY+L N+YQNHRRYVKS ++ QL    LKS+D  S+C+P   +    I 
Sbjct: 129 VPSDMKKPVFIYYRLTNFYQNHRRYVKSFDEDQLRGEALKSDDLKSNCKPLSYNEDKIIY 188

Query: 170 PCGLIAWSLFNDTFK----FIRESSELVVNRKNIAWKSDRNHKFGKQVY----------- 214
           PCGLIA S+FNDTF      I ++S   +  K IAW+SDR H++ K  Y           
Sbjct: 189 PCGLIANSMFNDTFSSLLTGIEDTSNYNLTTKGIAWESDR-HRYKKTKYNASDIVPPPNW 247

Query: 215 PFNFQNGTFIGGGSLDPSVP-LSDQEDLIVWMRTAALPSFRKMYGRIEEDLDADDVIAVH 273
              + +G        D ++P LS  E+   WMRTAA P F K+  R   D+       ++
Sbjct: 248 AKMYPDGY------TDDNIPDLSTWEEFQNWMRTAAFPKFSKLAMRNVNDVLPPGTYQLN 301

Query: 274 LMNNYNTYSFGGKKKLVLSTSSWLGGKNDFLGVAYVFVGSSSIIISLVFMLLHVKNPRPY 333
           +  N+    F G K +VL+T+S +GGKN FLG+ Y+ VG    ++ L+F++  +  PR  
Sbjct: 302 ITLNFPVLEFNGTKSIVLTTNSVIGGKNYFLGIVYLIVGGICALLGLIFLIKWLFKPRKM 361

Query: 334 GETAYLSWNR 343
            + +YL+WN 
Sbjct: 362 ADHSYLNWNM 371

Length = 372

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	343
KOG2952	351	consensus Cell cycle control protein [Cell cycle c	100.0
COG5035	372	CDC50 Cell cycle control protein [Cell division an	100.0
PF03381	278	CDC50: LEM3 (ligand-effect modulator 3) family / C	100.0
PF01102	122	Glycophorin_A: Glycophorin A; InterPro: IPR001195	83.93

>KOG2952 consensus Cell cycle control protein [Cell cycle control, cell division, chromosome partitioning; Transcription; Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-111  Score=801.24  Aligned_cols=322  Identities=50%  Similarity=0.896  Sum_probs=295.5

Q ss_pred             CccccCCCCCCCcccccccCCcccccchhHHHHHHHHHHHHHHHHHHhhhhhcCceEEEEEeCCCCCCCCccCCCceeee
Q 019301           18 IPIQSRRAKVFYQFTQQNLPACKPVLTPSWIVTTFLLMGVIFIPIGLVTLRTSHSVIEIVERYDTECIPEKFRGNKVSYI   97 (343)
Q Consensus        18 ~~~~~s~~p~~~~f~QQ~l~aw~p~ltp~~v~~~f~~ig~ifi~iGi~~~~~s~~v~E~~i~Y~~~c~~~~~~~~~~~~~   97 (343)
                      ...+++|||++++|+|||||||||++||++|+++||++|++|++||+++++++++|.|++++|++ |.+.+....+.+++
T Consensus        15 ~~~~~s~rP~~t~f~QQrLpA~qPilt~~~vlp~f~i~g~vFipiGv~l~~as~~v~Ei~i~YTd-c~~~~~~~~~~~~~   93 (351)
T KOG2952|consen   15 GNRKKSRRPKNTAFKQQRLPAWQPILTPRTVLPLFFIIGVVFLPIGVGLLFASSKVIEITIRYTD-CIPTGFRTNPSEYI   93 (351)
T ss_pred             chhhhccCCccccchhccccccccccCcchHHHHHHHHHHHHHhhhhheeEeecceEEEEEeccc-Cccccccccchhhh
Confidence            35667899999999999999999999999999999999999999999999999999999999977 87755445555555


Q ss_pred             ecC-CCCceeEEEEEecCCCCCceEEEEEecchhhhhhhhhcCCCchhhcCCCCCC-CCCCCCcccCCCC-ceeeechhh
Q 019301           98 KDS-TILKNCSLYLKVPKHMKAPIYIYYQLDNYYQNHRRYVKSRNDQQLLHGLKSN-DTSSCQPEDSSNG-LPIVPCGLI  174 (343)
Q Consensus        98 ~~~-~~~~~C~v~f~i~~~mk~pVyvYY~L~NFyQNHrry~~S~s~~QL~G~~~~~-~~~~C~P~~~~~g-~~~~PCGli  174 (343)
                      +.. .+.+.|+++|+||++|++|||+||+|+|||||||||++|||++||+|+.... ..++|+|+++.++ ++|+|||||
T Consensus        94 ~~~~~~~~~C~~~f~vp~~~k~pVy~YY~L~nfyQNhRRYvkSr~d~QL~G~~~~~~~~~~C~Pl~~~~~~kpi~PCGlI  173 (351)
T KOG2952|consen   94 QGHFDQTKSCTITFTVPKDMKGPVYLYYELTNFYQNHRRYVKSRDDKQLRGEPSKELNVKSCAPLEYNEGGKPIYPCGLI  173 (351)
T ss_pred             hcccCcccceEEEEEccccCCCCEEEEEehhHHHHHHHHHHhcccHHHhcCCCccccCccCCCcceecCCCceeeecchh
Confidence            532 2346799999999999999999999999999999999999999999997753 3366999998766 999999999


Q ss_pred             hhcccccceecccCCc---eeeeecccccccCccccccCCCCC-------CCCCCCCccCCCCcCCCCCCCCCchhHHHH
Q 019301          175 AWSLFNDTFKFIRESS---ELVVNRKNIAWKSDRNHKFGKQVY-------PFNFQNGTFIGGGSLDPSVPLSDQEDLIVW  244 (343)
Q Consensus       175 A~S~FNDtf~l~~~~~---~i~~~~~gIaw~sD~~~kf~~~~~-------p~~w~~~~~~~~~~~~~~~~~~~ne~FivW  244 (343)
                      |||||||||++...+.   .++++++||||++|+ +||+++.+       |+||+++.+.+| ..|.+.|+.+||+||||
T Consensus       174 AnSlFNDTf~~~~~~~~~~~~~l~~kgIaW~sDk-~kf~~p~~n~~~~~pPpnW~k~~~~gg-~~d~n~pl~~nedfivW  251 (351)
T KOG2952|consen  174 ANSLFNDTFELSLTNDGDSDYPLTTKGIAWESDK-HKFRKPIYNASGIVPPPNWQKGYPEGG-YTDDNIPLSENEDFIVW  251 (351)
T ss_pred             cchhcccccchhcccCCCccceeccCCccchhhh-hhhcCCCCccccccCCccccccCCcCC-cCCCCCCchhhHHHHHH
Confidence            9999999999976533   789999999999999 79998755       999999999887 78888898999999999


Q ss_pred             hhcCCCCchhhhhhhcccC-CCCCceEEEEEEeeecCcccCceEEEEEEeccccCCCCchhhHHHHHHHHHHHHHHHHHH
Q 019301          245 MRTAALPSFRKMYGRIEED-LDADDVIAVHLMNNYNTYSFGGKKKLVLSTSSWLGGKNDFLGVAYVFVGSSSIIISLVFM  323 (343)
Q Consensus       245 Mr~Aalp~FrKLYg~i~~~-l~~g~~y~v~I~nnypv~~F~G~K~ivlst~s~~GgkN~~Lgi~yivvG~i~~i~~i~f~  323 (343)
                      ||+||||+||||||||+++ |++| +|+++|++||||.+|+|+|.+||+|+||+||||+||||+|||||++|+++|++|+
T Consensus       252 MRtAAlPtFrKLy~~i~~~gL~~G-~y~l~i~~Nypv~sf~G~K~~vlst~SwlGgkN~FLgI~YLvVG~ic~~l~~~f~  330 (351)
T KOG2952|consen  252 MRTAALPTFRKLYRIIESNGLPKG-TYQLNITNNYPVRSFNGKKKFVLSTTSWLGGKNPFLGIAYLVVGSICILLGLIFL  330 (351)
T ss_pred             HHhcccchHHHHHhhhccCCCCCc-eEEEEEecccceeecCCceEEEEeeccccccCCccceehHHHHHHHHHHHHHHHH
Confidence            9999999999999999987 8888 6999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhCCCCCCCCcccccCC
Q 019301          324 LLHVKNPRPYGETAYLSWNR  343 (343)
Q Consensus       324 ~~~~~~pr~~gd~~~l~w~~  343 (343)
                      ++|+++||++||++||+|++
T Consensus       331 ~~~l~~~r~~~d~~~l~~~~  350 (351)
T KOG2952|consen  331 VIYLFKPRRLGDPSYLSWNR  350 (351)
T ss_pred             HHHhhcccccCCcccccccc
Confidence            99999999999999999985

>COG5035 CDC50 Cell cycle control protein [Cell division and chromosome partitioning / Transcription / Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-98  Score=698.13  Aligned_cols=320  Identities=37%  Similarity=0.661  Sum_probs=283.8

Q ss_pred             ccccCCCCCCCcccccccCCcccccchhHHHHHHHHHHHHHHHHHHhhhhhcCceEEEEEeCCCCCCCCcc------CC-
Q 019301           19 PIQSRRAKVFYQFTQQNLPACKPVLTPSWIVTTFLLMGVIFIPIGLVTLRTSHSVIEIVERYDTECIPEKF------RG-   91 (343)
Q Consensus        19 ~~~~s~~p~~~~f~QQ~l~aw~p~ltp~~v~~~f~~ig~ifi~iGi~~~~~s~~v~E~~i~Y~~~c~~~~~------~~-   91 (343)
                      ...++|||.+++|+|||||||||++||+.|+++||++|++|.+||+.+++++.+|+|++|+|++ |...+.      +. 
T Consensus        16 ~~~k~r~p~nt~F~QQrL~awqpilsp~~vLpL~flig~vf~plG~gl~~~~s~VqeltI~Ytd-c~t~as~~f~~iPs~   94 (372)
T COG5035          16 SLLKSRRPPNTAFRQQRLKAWQPILSPRTVLPLLFLIGIVFAPLGGGLLVASSSVQELTIDYTD-CMTLASDEFSDIPSE   94 (372)
T ss_pred             ccccccCCchhhHHHhhccccccccCchHHHHHHHHHHHHHhhccceEEEEeeeeeeeeecccc-cccccchhhhhCchh
Confidence            4567899999999999999999999999999999999999999999999999999999999999 765441      11 


Q ss_pred             -------------Cceeeeec-CCCCceeEEEEEecCCCCCceEEEEEecchhhhhhhhhcCCCchhhcCCCCCCCC--C
Q 019301           92 -------------NKVSYIKD-STILKNCSLYLKVPKHMKAPIYIYYQLDNYYQNHRRYVKSRNDQQLLHGLKSNDT--S  155 (343)
Q Consensus        92 -------------~~~~~~~~-~~~~~~C~v~f~i~~~mk~pVyvYY~L~NFyQNHrry~~S~s~~QL~G~~~~~~~--~  155 (343)
                                   ..|....+ ..+...|++.|++|++||.|||+||+|+|||||||||++|.|.+||+|+..+.+.  +
T Consensus        95 ~~~~~f~~~~~~~pqW~~~~~~~~d~~~C~irf~vp~~~k~~vfiyyrl~nFyQNhrRY~~S~d~dQl~Ge~~~~~~l~~  174 (372)
T COG5035          95 YIQFHFKKKVNVLPQWRFSTDEEDDFQKCQIRFTVPSDMKKPVFIYYRLTNFYQNHRRYVKSFDEDQLRGEALKSDDLKS  174 (372)
T ss_pred             heeeeeecccccccceeecccccCCcceeEEEEEchhhcccceeeeehhHHHHHhhHHHHhccCHHHhcCcccccccccc
Confidence                         11222211 1234579999999999999999999999999999999999999999999776432  7


Q ss_pred             CCCcccCCCCceeeechhhhhcccccceeccc----CCceeeeecccccccCccccccCCC-------CCCCCCCCCccC
Q 019301          156 SCQPEDSSNGLPIVPCGLIAWSLFNDTFKFIR----ESSELVVNRKNIAWKSDRNHKFGKQ-------VYPFNFQNGTFI  224 (343)
Q Consensus       156 ~C~P~~~~~g~~~~PCGliA~S~FNDtf~l~~----~~~~i~~~~~gIaw~sD~~~kf~~~-------~~p~~w~~~~~~  224 (343)
                      .|.|+.+..+|+||||||||||||||||+...    +++.+.++.+||||++|++ +|+.+       ++||+|.+.++.
T Consensus       175 nC~PL~~nedK~~YPcGLIaNSmfNDtf~~~l~~i~Dts~Y~lttkgIaW~sDr~-rykktkYn~sdIvpPPnW~k~ypd  253 (372)
T COG5035         175 NCKPLSYNEDKIIYPCGLIANSMFNDTFSSLLTGIEDTSNYNLTTKGIAWESDRH-RYKKTKYNASDIVPPPNWAKMYPD  253 (372)
T ss_pred             cCCcccccCCCeeecccccccccccccchhhccccccccccccccCCccchhhcc-cccCCCCChhhcCCCCchHhhCCC
Confidence            89999998889999999999999999998754    3456889999999999998 89865       579999877766


Q ss_pred             CCCcCCCCCC-CCCchhHHHHhhcCCCCchhhhhhhcccC-CCCCceEEEEEEeeecCcccCceEEEEEEeccccCCCCc
Q 019301          225 GGGSLDPSVP-LSDQEDLIVWMRTAALPSFRKMYGRIEED-LDADDVIAVHLMNNYNTYSFGGKKKLVLSTSSWLGGKND  302 (343)
Q Consensus       225 ~~~~~~~~~~-~~~ne~FivWMr~Aalp~FrKLYg~i~~~-l~~g~~y~v~I~nnypv~~F~G~K~ivlst~s~~GgkN~  302 (343)
                      |  .-|.++| +.++|.|+||||+||||+|+||++|.+.| |.+| +|+++|+.||||..|+|+|+|||+|.|.+||||+
T Consensus       254 G--Ytd~NiPDls~wE~Fq~WMrtAafP~F~KLa~~N~~d~l~~G-~Y~lnI~l~fPv~~f~GtKsi~Ltt~SviGgkN~  330 (372)
T COG5035         254 G--YTDDNIPDLSTWEEFQNWMRTAAFPKFSKLAMRNVNDVLPPG-TYQLNITLNFPVLEFNGTKSIVLTTNSVIGGKNY  330 (372)
T ss_pred             C--CCccCCCcchhHHHHHHHhhcccCchHHHHhcccccccCCCc-eEEEEEEeecceeecCCceEEEEEecccccCCCc
Confidence            5  3355666 67999999999999999999999998765 6676 6999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcccccCC
Q 019301          303 FLGVAYVFVGSSSIIISLVFMLLHVKNPRPYGETAYLSWNR  343 (343)
Q Consensus       303 ~Lgi~yivvG~i~~i~~i~f~~~~~~~pr~~gd~~~l~w~~  343 (343)
                      ||||+|||||++|.++|++|++.++++||++||++||+||.
T Consensus       331 fLGI~ylivg~ical~~~if~~~~~f~pR~~~Dh~yLnw~~  371 (372)
T COG5035         331 FLGIVYLIVGGICALLGLIFLIKWLFKPRKMADHSYLNWNM  371 (372)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhhCCcccCCcccccccC
Confidence            99999999999999999999999999999999999999984

>PF03381 CDC50: LEM3 (ligand-effect modulator 3) family / CDC50 family; InterPro: IPR005045 Members of this family have no known function

Probab=100.00  E-value=8.5e-85  Score=619.91  Aligned_cols=261  Identities=47%  Similarity=0.841  Sum_probs=227.3

Q ss_pred             hhhhcCceEEEEEeCCCCCCCCccCCCceeeeecCCCCceeEEEEEecCCCCCceEEEEEecchhhhhhhhhcCCCchhh
Q 019301           66 TLRTSHSVIEIVERYDTECIPEKFRGNKVSYIKDSTILKNCSLYLKVPKHMKAPIYIYYQLDNYYQNHRRYVKSRNDQQL  145 (343)
Q Consensus        66 ~~~~s~~v~E~~i~Y~~~c~~~~~~~~~~~~~~~~~~~~~C~v~f~i~~~mk~pVyvYY~L~NFyQNHrry~~S~s~~QL  145 (343)
                      |++++++++|++++||++|......     ........++|.++|+||++|++||||||||+|||||||||++|||++||
T Consensus         1 ll~~s~~v~E~~~~Yd~~~~~~~~~-----~~~~~~~~~~c~v~f~i~~~~~~pVyvYY~L~nFYQNhr~y~~S~~~~QL   75 (278)
T PF03381_consen    1 LLVASNSVVEIEIRYDDCCDCQNCY-----INEFSPIPCTCSVTFNIPEDMKGPVYVYYELTNFYQNHRRYVKSRSDSQL   75 (278)
T ss_pred             CEEEeCCEEEEEEECCCCCCCCCcc-----ccccCCCCceEEEEEEcCccCCCCEEEEEEEehhhHHhHHHHhcCCHHHh
Confidence            4678999999999999988653210     00111224589999999999999999999999999999999999999999


Q ss_pred             cCCCCCCC-CCCCCcccCC---CCceeeechhhhhcccccceeccc----CCceeeeecccccccCccccccCCCC----
Q 019301          146 LHGLKSND-TSSCQPEDSS---NGLPIVPCGLIAWSLFNDTFKFIR----ESSELVVNRKNIAWKSDRNHKFGKQV----  213 (343)
Q Consensus       146 ~G~~~~~~-~~~C~P~~~~---~g~~~~PCGliA~S~FNDtf~l~~----~~~~i~~~~~gIaw~sD~~~kf~~~~----  213 (343)
                      +|+..+.+ .++|+|+++.   ++++++||||||||||||||++..    .++.++++++||||++|++.+|+++.    
T Consensus        76 ~G~~~~~~~~~~C~p~~~~~~~~~~~~~PCGliA~S~FNDtF~l~~~~~~~~~~~~~~~~gIaw~~d~~~~fk~~~~~~~  155 (278)
T PF03381_consen   76 KGKIVSKSDLSDCDPLRTNNENNGKIIYPCGLIANSMFNDTFSLYRRNSGNNENIPLDETGIAWSSDRESKFKNPHYNNS  155 (278)
T ss_pred             CCCccccCCCCCCCCceeccCCCCCEeecccHhHhhhccceEEeeecccCCCceeeeecccccCchHHHHhcCCCCCccc
Confidence            99985543 3799999976   789999999999999999999974    34679999999999999988999853    


Q ss_pred             ---CCCCCCCCccCCCCcCCCCCCCC-CchhHHHHhhcCCCCchhhhhhhc-ccCCCCCceEEEEEEeeecCcccCceEE
Q 019301          214 ---YPFNFQNGTFIGGGSLDPSVPLS-DQEDLIVWMRTAALPSFRKMYGRI-EEDLDADDVIAVHLMNNYNTYSFGGKKK  288 (343)
Q Consensus       214 ---~p~~w~~~~~~~~~~~~~~~~~~-~ne~FivWMr~Aalp~FrKLYg~i-~~~l~~g~~y~v~I~nnypv~~F~G~K~  288 (343)
                         +|++|...     .+.+...|.. +|||||||||+||||+|||||||| +++|++|. |+|+|+|||||+.|+|+|+
T Consensus       156 ~~~~~~~W~~~-----~~~~~~~p~~~~ne~fivWMr~a~lp~FrKLYg~i~~~~L~~G~-y~i~I~nnypv~~f~G~K~  229 (278)
T PF03381_consen  156 NTVPPPNWRPG-----YENDTPWPDNSENEHFIVWMRPAALPTFRKLYGRIDNDDLPAGN-YTIDITNNYPVSSFGGKKS  229 (278)
T ss_pred             cccCCCceeee-----ccCCCCCCcccccHHHHHHhccccCCCeeEeEeeeccCCCCCce-EEEEEEEeecccccCcEEE
Confidence               46677431     2233334443 699999999999999999999999 88999996 9999999999999999999


Q ss_pred             EEEEeccccCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCc
Q 019301          289 LVLSTSSWLGGKNDFLGVAYVFVGSSSIIISLVFMLLHVKNPRPYGETA  337 (343)
Q Consensus       289 ivlst~s~~GgkN~~Lgi~yivvG~i~~i~~i~f~~~~~~~pr~~gd~~  337 (343)
                      |||+|+||+||||+||||+||++|+||+++|++|+++|+++||++||++
T Consensus       230 ivlst~s~~Ggkn~~Lgi~ylvvg~i~~v~~i~~~~~~~~~~r~~gD~~  278 (278)
T PF03381_consen  230 IVLSTTSWFGGKNYFLGIAYLVVGGICLVLAIIFLIIHYFKPRKLGDTS  278 (278)
T ss_pred             EEEEeccccCccccHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            9999999999999999999999999999999999999999999999985

They have predicted transmembrane helices.; GO: 0016020 membrane

>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane

Probab=83.93  E-value=0.93  Score=38.46  Aligned_cols=24  Identities=8%  Similarity=0.254  Sum_probs=14.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhC
Q 019301          306 VAYVFVGSSSIIISLVFMLLHVKN  329 (343)
Q Consensus       306 i~yivvG~i~~i~~i~f~~~~~~~  329 (343)
                      |+.||+|+++-++++++++.++.+
T Consensus        66 i~~Ii~gv~aGvIg~Illi~y~ir   89 (122)
T PF01102_consen   66 IIGIIFGVMAGVIGIILLISYCIR   89 (122)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eeehhHHHHHHHHHHHHHHHHHHH
Confidence            556666666666666666665553

Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00