Citrus Sinensis ID: 019311

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340---
Protein Sequence
MDVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLEPVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIKGALMITAGCFSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWGKSKDHKSPSPSTDEHLPPAEQTNNTGSNGKENFGHEVTKIDV
Secondary Structure (PSIPRED)
ccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHEEccEEEEEEEccccccccccccccccccccccccccccccccEEccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEcccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHEEccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHEHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccHEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHccccccccHcccccHHccccccccccccccccEEEEEc
Coil and Loop (DISEMBL)
MDVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVildkkirpkMTLAILTKLLLLGLlepvidqnlYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIKGPILElfwtkgaenhghgssgttthnsIKGALMITAGCFSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGLTYYIQGivmkdrgpvfvaAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVwgkskdhkspspstdehlppaeqtnntgsngkenfghevtkidv
Flexible Loop (DISEMBL)
MDVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLEPVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIKGALMITAGCFSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWGKSKDHKSpspstdehlppaeqtnntgsngkenfghevtkidv
Low Complexity Region (SEG)
MDVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTlailtkllllgllEPVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIKGALMITAGCFSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLgriigaiiiiggLYLVVWGKSKDHKSPSPSTDEHLPPAEQTNNTGSNGKENFGHEVTKIDV
Disordered region (IsUnstruct)
***LCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLEPVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIKGPILELFWTKGAEN*********THNSIKGALMITAGCFSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWG******************************************
Disordered Region (DISOPRED)
MDVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLEPVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIKGPILEL*******************NSIKGALMITAGCFSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVW****************************************I**
Disordered Region (DISEMBL)
MDVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLEPVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIKGALMITAGCFSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWGK*****************AEQTNNTGSNGKENFGHEVTKIDV
Disordered Region (DISPRO)
MDVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLEPVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIKGPILELFWT***************HNSIKGALMITAGCFSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWGKS*********************************EV*****
Transmembrane Helix (TMHMM)
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MDVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLEPVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIKGALMITAGCFSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWGKSKDHKSPSPSTDEHLPPAEQTNNTGSNGKENFGHEVTKIDV
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	343	2.2.26 [Sep-21-2011]
Q9ZUS1	380	WAT1-related protein At2g	yes	no	0.982	0.886	0.659	1e-132
O80638	374	WAT1-related protein At2g	no	no	0.927	0.850	0.611	1e-112
F4IQX1	336	WAT1-related protein At2g	no	no	0.889	0.907	0.583	1e-102
Q501F8	373	WAT1-related protein At4g	no	no	0.886	0.815	0.551	6e-93
Q9SUF1	384	WAT1-related protein At4g	no	no	0.886	0.791	0.498	1e-90
Q9LPF1	370	WAT1-related protein At1g	no	no	0.970	0.9	0.492	1e-89
F4HZQ7	389	WAT1-related protein At1g	no	no	0.997	0.879	0.464	5e-88
Q9FNA5	377	WAT1-related protein At5g	no	no	0.889	0.809	0.504	3e-87
Q9FL41	402	WAT1-related protein At5g	no	no	0.965	0.823	0.464	9e-85
F4IJ08	394	WAT1-related protein At2g	no	no	0.938	0.817	0.424	3e-76

>sp|Q9ZUS1|WTR13_ARATH WAT1-related protein At2g37460 OS=Arabidopsis thaliana GN=At2g37460 PE=2 SV=1

 Score =  472 bits (1215), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 227/344 (65%), Positives = 271/344 (78%), Gaps = 7/344 (2%)

Query: 1   MDVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLE 60
           MD+L KA LNKGMS YVLVVYRHA ATI MAPFA   DKK+RPKMTL I  K+ LLGLLE
Sbjct: 29  MDILSKAVLNKGMSNYVLVVYRHAVATIVMAPFAFYFDKKVRPKMTLMIFFKISLLGLLE 88

Query: 61  PVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLAT 120
           PVIDQNLY++GMKYTTATFA AMYN+LPAITF++A+I  LE V L+ IRS  KV+GTLAT
Sbjct: 89  PVIDQNLYYLGMKYTTATFATAMYNVLPAITFVLAYIFGLERVKLRCIRSTGKVVGTLAT 148

Query: 121 VAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIKGALMITAGCFSWSFFIILQA 180
           V GAM+MTL+KGP+L+LFWTKG     H ++GT  H++IKGA+++T GCFS++ F+ILQA
Sbjct: 149 VGGAMIMTLVKGPVLDLFWTKGVS--AHNTAGTDIHSAIKGAVLVTIGCFSYACFMILQA 206

Query: 181 ITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGL 240
           ITL+ YPAELSLTAWIC  GT+EGT  AL+ME+G  S WAI WDTKL+ + YSGI+CS L
Sbjct: 207 ITLRTYPAELSLTAWICLMGTIEGTAVALVMEKGNPSAWAIGWDTKLLTATYSGIVCSAL 266

Query: 241 TYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVW 300
            YY+ G+VMK RGPVFV AFSPLCM+IVAIMSTII AEQMYLGR++GA++I  GLYLV+W
Sbjct: 267 AYYVGGVVMKTRGPVFVTAFSPLCMIIVAIMSTIIFAEQMYLGRVLGAVVICAGLYLVIW 326

Query: 301 GKSKDHKSPS--PSTDEHLPPAEQTNNTGSNGKENFGHEVTKID 342
           GK KD+K  S     DE   P  + +    NGK+N  HEV  I 
Sbjct: 327 GKGKDYKYNSTLQLDDESAQPKLELSG---NGKDNVDHEVITIS 367

Arabidopsis thaliana (taxid: 3702)

>sp|O80638|WTR14_ARATH WAT1-related protein At2g39510 OS=Arabidopsis thaliana GN=At2g39510 PE=2 SV=1

 Score =  404 bits (1038), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 195/319 (61%), Positives = 245/319 (76%), Gaps = 1/319 (0%)

Query: 1   MDVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLE 60
           + ++ K ALN+GMSP+VL  YRH  ATI +APFA  LD+KIRPKMTL+I  K+LLLGLLE
Sbjct: 22  LSIIAKFALNQGMSPHVLASYRHIVATIFIAPFAYFLDRKIRPKMTLSIFFKILLLGLLE 81

Query: 61  PVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLAT 120
           P IDQNLY+ GMKYT+ATF AAM N+LPA  F+MAWI RLE VN+K I S AK++GT+ T
Sbjct: 82  PTIDQNLYYTGMKYTSATFTAAMTNVLPAFAFIMAWIFRLEKVNVKKIHSQAKILGTIVT 141

Query: 121 VAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIKGALMITAGCFSWSFFIILQA 180
           V GAM+MT++KGP++ L W    + H   S+     +  KGA +I  GC  W+ FI LQA
Sbjct: 142 VGGAMLMTVVKGPLIPLPWANPHDIHQDSSNTGVKQDLTKGASLIAIGCICWAGFINLQA 201

Query: 181 ITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGL 240
           ITLK+YP ELSLTA+ICF G++E T+ AL +ERG  S WAIH D+KL+A+VY G+ICSG+
Sbjct: 202 ITLKSYPVELSLTAYICFLGSIESTIVALFIERGNPSAWAIHLDSKLLAAVYGGVICSGI 261

Query: 241 TYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVW 300
            YY+QG++MK RGPVFV AF+PL MVIVAI+ +IILAE M+LGRI+GAI+I+ GLY V+W
Sbjct: 262 GYYVQGVIMKTRGPVFVTAFNPLSMVIVAILGSIILAEVMFLGRILGAIVIVLGLYSVLW 321

Query: 301 GKSKDHKSPSPST-DEHLP 318
           GKSKD  S S S  D+ LP
Sbjct: 322 GKSKDEPSSSFSDMDKELP 340

Arabidopsis thaliana (taxid: 3702)

>sp|F4IQX1|WTR12_ARATH WAT1-related protein At2g37450 OS=Arabidopsis thaliana GN=At2g37450 PE=2 SV=1

 Score =  373 bits (957), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 195/334 (58%), Positives = 235/334 (70%), Gaps = 29/334 (8%)

Query: 1   MDVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLE 60
           MD+L K  LNKGMS YVL VYRH  AT+ MAPFA   D                      
Sbjct: 23  MDILTKDVLNKGMSIYVLSVYRHGVATVVMAPFAFYFD---------------------N 61

Query: 61  PVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLAT 120
           PVI QNL+ +GMKYTTATFA A+YN LPA+TF++A I RLE+V  +SIRS AKV+GT+ T
Sbjct: 62  PVIAQNLFNLGMKYTTATFAIALYNTLPAVTFILALIFRLESVKFQSIRSAAKVVGTVTT 121

Query: 121 VAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIKGALMITAGCFSWSFFIILQA 180
           V G MVMTL+KGP L+LFWTKG       + GT  H+SIKGA+++T GCFS++ F+ILQA
Sbjct: 122 VGGIMVMTLVKGPALDLFWTKGPS--AQNTVGTDIHSSIKGAVLVTIGCFSYACFMILQA 179

Query: 181 ITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGL 240
           ITLK YPAELSL  WIC  GT+EG + AL+ME+G  S+WAI WDTKL+   YSGI+CS L
Sbjct: 180 ITLKTYPAELSLATWICLIGTIEGVVVALVMEKGNPSVWAIGWDTKLLTITYSGIVCSAL 239

Query: 241 TYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVW 300
            YYI G+VMK RGPVFV AF PLCM++VAIMS+II  EQMYLGR +GA +I  GLYLV+W
Sbjct: 240 GYYIGGVVMKTRGPVFVTAFKPLCMIVVAIMSSIIFDEQMYLGRALGATVICVGLYLVIW 299

Query: 301 GKSKDHKSPS-PSTDEHLPPAEQTNNTGSNGKEN 333
           GK+KD++ PS P  D+ L  A     T S  KE 
Sbjct: 300 GKAKDYEYPSTPQIDDDLAQA-----TTSKQKEQ 328

Arabidopsis thaliana (taxid: 3702)

>sp|Q501F8|WTR32_ARATH WAT1-related protein At4g08300 OS=Arabidopsis thaliana GN=At4g08300 PE=2 SV=1

 Score =  341 bits (874), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 171/310 (55%), Positives = 223/310 (71%), Gaps = 6/310 (1%)

Query: 1   MDVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLE 60
           M ++   +   GM+ ++L  YRH  ATI +APFA+IL++KIRPKMT  +  ++L LG LE
Sbjct: 25  MYIITMVSFKHGMNHWILATYRHVVATIVIAPFALILERKIRPKMTWPLFLRILALGFLE 84

Query: 61  PVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLAT 120
           P++DQNLY+IGMK T+AT+++A  N LPAITF+MA I R+E VNLK  RSLAKVIGT  T
Sbjct: 85  PLLDQNLYYIGMKATSATYSSAFVNALPAITFIMAVIFRIETVNLKKTRSLAKVIGTAIT 144

Query: 121 VAGAMVMTLIKGPILELFWTKGAENHGHGSSG----TTTHNSIKGALMITAGCFSWSFFI 176
           V GAMVMTL KGP +ELF T  +  HG GSSG    TT  N + G L +     +W+ F 
Sbjct: 145 VGGAMVMTLYKGPAIELFKTAHSSLHG-GSSGTSSETTDQNWVTGTLAVMGSITTWAGFF 203

Query: 177 ILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGII 236
           ILQ+ TLK YPAELSL  WIC  GTV  T+A+LIM R   S W +  D+  +A+VYSG++
Sbjct: 204 ILQSFTLKKYPAELSLVMWICAMGTVLNTIASLIMVR-DVSAWKVGMDSGTLAAVYSGVV 262

Query: 237 CSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLY 296
           CSG+ YYIQ IV+++RGPVF  +FSP+CM+I A +  ++LAE+++LG IIGAI I+ GLY
Sbjct: 263 CSGMAYYIQSIVIRERGPVFTTSFSPMCMIITAFLGVLVLAEKIHLGSIIGAIFIVFGLY 322

Query: 297 LVVWGKSKDH 306
            VVWGK+KD 
Sbjct: 323 SVVWGKAKDE 332

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SUF1|WTR31_ARATH WAT1-related protein At4g08290 OS=Arabidopsis thaliana GN=At4g08290 PE=2 SV=1

 Score =  333 bits (854), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 153/307 (49%), Positives = 229/307 (74%), Gaps = 3/307 (0%)

Query: 3   VLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLEPV 62
           ++  A LN+G + YV++VYR+  A + +APFA+I ++K+RPKMTL++L K++ LG LEPV
Sbjct: 29  IVIMATLNQGQNRYVVIVYRNLVAALVLAPFALIFERKVRPKMTLSVLWKIMALGFLEPV 88

Query: 63  IDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVA 122
           +DQ   ++GM  T+AT+ +A+ NILP++TF++AWI+R+E VN+  +RS AK+IGTL  + 
Sbjct: 89  LDQGFGYLGMNMTSATYTSAIMNILPSVTFIIAWILRMEKVNIAEVRSKAKIIGTLVGLG 148

Query: 123 GAMVMTLIKGPILELFWTKG--AENHGHGSSGTTTHNSIKGALMITAGCFSWSFFIILQA 180
           GA+VMTL KGP++ L W+     + +GH ++    +N + G L+I  GC +WS F +LQ+
Sbjct: 149 GALVMTLYKGPLIPLPWSNPNMDQQNGHTNNSQDHNNWVVGTLLILLGCVAWSGFYVLQS 208

Query: 181 ITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGL 240
           IT+K YPA+LSL+A IC  G V+    AL++ER   S WA+ WD +L A +Y+GI+ SG+
Sbjct: 209 ITIKTYPADLSLSALICLAGAVQSFAVALVVER-HPSGWAVGWDARLFAPLYTGIVSSGI 267

Query: 241 TYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVW 300
           TYY+QG+VMK RGPVFV AF+PLCM++VA++++ IL EQ++ G +IG  +I  GLY+VVW
Sbjct: 268 TYYVQGMVMKTRGPVFVTAFNPLCMILVALIASFILHEQIHFGCVIGGAVIAAGLYMVVW 327

Query: 301 GKSKDHK 307
           GK KD++
Sbjct: 328 GKGKDYE 334

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LPF1|WTR8_ARATH WAT1-related protein At1g44800 OS=Arabidopsis thaliana GN=At1g44800 PE=1 SV=1

 Score =  330 bits (846), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 168/341 (49%), Positives = 231/341 (67%), Gaps = 8/341 (2%)

Query: 1   MDVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLE 60
           M ++   +   GM  +VL  YRH  AT+ MAPFA++ ++KIRPKMTLAI  +LL LG+LE
Sbjct: 25  MYIITMVSFKHGMDHWVLATYRHVVATVVMAPFALMFERKIRPKMTLAIFWRLLALGILE 84

Query: 61  PVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLAT 120
           P++DQNLY+IG+K T+A++ +A  N LPA+TF++A I RLE VN + + S+AKV+GT+ T
Sbjct: 85  PLMDQNLYYIGLKNTSASYTSAFTNALPAVTFILALIFRLETVNFRKVHSVAKVVGTVIT 144

Query: 121 VAGAMVMTLIKGPILELFWTKGAEN--HGHGSSGTTTHNSIKGALMITAGCFSWSFFIIL 178
           V GAM+MTL KGP +E+   K A N  HG  SS  T  + + G + I     +W+ F IL
Sbjct: 145 VGGAMIMTLYKGPAIEI--VKAAHNSFHGGSSSTPTGQHWVLGTIAIMGSISTWAAFFIL 202

Query: 179 QAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICS 238
           Q+ TLK YPAELSL   IC  GT+   +A+LIM R   S W I  D+  +A+VYSG++CS
Sbjct: 203 QSYTLKVYPAELSLVTLICGIGTILNAIASLIMVR-DPSAWKIGMDSGTLAAVYSGVVCS 261

Query: 239 GLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLV 298
           G+ YYIQ IV+K RGPVF  +FSP+CM+I A +  ++LAE+++LG IIGA+ I+ GLY V
Sbjct: 262 GIAYYIQSIVIKQRGPVFTTSFSPMCMIITAFLGALVLAEKIHLGSIIGAVFIVLGLYSV 321

Query: 299 VWGKSKDHKSPSPSTDEHLPPAEQTNNTGSNGKENFGHEVT 339
           VWGKSKD  +P    DE +    Q     +  K+  GH+V+
Sbjct: 322 VWGKSKDEVNP---LDEKIVAKSQELPITNVVKQTNGHDVS 359

Arabidopsis thaliana (taxid: 3702)

>sp|F4HZQ7|WTR5_ARATH WAT1-related protein At1g21890 OS=Arabidopsis thaliana GN=At1g21890 PE=2 SV=1

 Score =  324 bits (831), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 170/366 (46%), Positives = 233/366 (63%), Gaps = 24/366 (6%)

Query: 1   MDVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLE 60
           M ++   +L  GM+ YVL VYRHA AT  +APFA+  ++KIRPKMT  I  ++ LLG +E
Sbjct: 25  MYIITMVSLKHGMNHYVLAVYRHAIATAVIAPFALFHERKIRPKMTFRIFLQIALLGFIE 84

Query: 61  PVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLAT 120
           PV+DQNLY++GM YT+ATFA+A  N+LPAITF++A I RLE+VN K +RS+AKV+GT+ T
Sbjct: 85  PVLDQNLYYVGMTYTSATFASATANVLPAITFVLAIIFRLESVNFKKVRSIAKVVGTVIT 144

Query: 121 VAGAMVMTLIKGPILELF---------WTKGAENHGHGSSGTTTHNSIKGALMITAGCFS 171
           V+GA++MTL KGPI++                 +HG   +     + I G LM+    F 
Sbjct: 145 VSGALLMTLYKGPIVDFIRFGGGGGGGSDGAGGSHGGAGAAAMDKHWIPGTLMLLGRTFG 204

Query: 172 WSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASV 231
           W+ F ILQ+ TLK YPAELSLT  IC  GT+EGT  +L+  R   S W I +D+ L A+ 
Sbjct: 205 WAGFFILQSFTLKQYPAELSLTTLICLMGTLEGTAVSLVTVR-DLSAWKIGFDSNLFAAA 263

Query: 232 YSGIICSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIII 291
           YSG+ICSG+ YY+QG+VM++RGPVFVA F+PLC+VI A +  ++L+E ++LG +IG + I
Sbjct: 264 YSGVICSGVAYYVQGVVMRERGPVFVATFNPLCVVITAALGVVVLSESIHLGSVIGTLFI 323

Query: 292 IGGLYLVVWGKSKDH--------------KSPSPSTDEHLPPAEQTNNTGSNGKENFGHE 337
           I GLY VVWGK KD               KSP    D     A +       G+E     
Sbjct: 324 IVGLYTVVWGKGKDKRMTDDDEDCKGLPIKSPVKPVDTGKGLAAELEMKSKEGQEAKATT 383

Query: 338 VTKIDV 343
            T++++
Sbjct: 384 TTQVEI 389

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FNA5|WTR39_ARATH WAT1-related protein At5g13670 OS=Arabidopsis thaliana GN=At5g13670 PE=2 SV=1

 Score =  322 bits (824), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 156/309 (50%), Positives = 220/309 (71%), Gaps = 4/309 (1%)

Query: 1   MDVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLE 60
           M ++ K ALNKGMSP+VLV YR A A+  + PFA+IL++  RPK+T  IL ++ +L L E
Sbjct: 22  MSIVAKLALNKGMSPHVLVAYRMAVASALITPFALILERNTRPKLTFKILLQIAILSLFE 81

Query: 61  PVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLAT 120
           PV++QNLY+ GMK TTATF +A+ N LPA+TF+MA + +LE V ++   S AK++GT+  
Sbjct: 82  PVVEQNLYYSGMKLTTATFTSALCNALPAMTFIMACVFKLEKVTIERRHSQAKLVGTMVA 141

Query: 121 VAGAMVMTLIKGPILELFWT---KGAENHGHGSSGTTTHNSIKGALMITAGCFSWSFFII 177
           + GAM+MT +KG ++EL WT   +G   H H        +  +G++M+ A CFSWS +II
Sbjct: 142 IGGAMLMTFVKGNVIELPWTSNSRGLNGHTHAMRIPKQADIARGSIMLVASCFSWSCYII 201

Query: 178 LQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIIC 237
           LQA  L  Y AELSLTA +C  G +E T+  LI ER   S+W I+ D  L+AS+Y G++ 
Sbjct: 202 LQAKILAQYKAELSLTALMCIMGMLEATVMGLIWERKNMSVWKINPDVTLLASIYGGLV- 260

Query: 238 SGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYL 297
           SGL YY+ G   K+RGPVFV+AF+PL MV+VAI+ST +  E++Y+GR+IG+++I+ G+YL
Sbjct: 261 SGLAYYVIGWASKERGPVFVSAFNPLSMVLVAILSTFVFLEKVYVGRVIGSVVIVIGIYL 320

Query: 298 VVWGKSKDH 306
           V+WGKSKD 
Sbjct: 321 VLWGKSKDK 329

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FL41|WTR38_ARATH WAT1-related protein At5g07050 OS=Arabidopsis thaliana GN=At5g07050 PE=2 SV=1

 Score =  313 bits (803), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 158/340 (46%), Positives = 235/340 (69%), Gaps = 9/340 (2%)

Query: 1   MDVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLE 60
           M+++ K +LN GMS YVLVVYRHA AT  +APFA   ++K +PK+T +I  +L +LGLL 
Sbjct: 32  MNIITKISLNTGMSHYVLVVYRHAIATAVIAPFAFFFERKAQPKITFSIFMQLFILGLLG 91

Query: 61  PVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLAT 120
           PVIDQN Y++G+KYT+ TF+ AM N+LPA+TF++A + R+E ++LK +   AK+ GT+ T
Sbjct: 92  PVIDQNFYYMGLKYTSPTFSCAMSNMLPAMTFILAVLFRMEMLDLKKLWCQAKIAGTVVT 151

Query: 121 VAGAMVMTLIKGPILELFWTK--GAENHGHGSSGTTTHNS-----IKGALMITAGCFSWS 173
           VAGAM+MT+ KGPI+ELFWTK    ++  H ++ ++ ++S     +KG++++     +W+
Sbjct: 152 VAGAMLMTIYKGPIVELFWTKYMHIQDSSHANTTSSKNSSSDKEFLKGSILLIFATLAWA 211

Query: 174 FFIILQAITLKAYPA-ELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVY 232
              +LQA  LK Y   +LSLT  ICF GT++      +ME    S W I WD  L+A+ Y
Sbjct: 212 SLFVLQAKILKTYAKHQLSLTTLICFIGTLQAVAVTFVMEHN-PSAWRIGWDMNLLAAAY 270

Query: 233 SGIICSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIII 292
           SGI+ S ++YY+QGIVMK RGPVF  AFSPL MVIVA+M + +LAE+++LG +IGA++I+
Sbjct: 271 SGIVASSISYYVQGIVMKKRGPVFATAFSPLMMVIVAVMGSFVLAEKIFLGGVIGAVLIV 330

Query: 293 GGLYLVVWGKSKDHKSPSPSTDEHLPPAEQTNNTGSNGKE 332
            GLY V+WGK K+++       +    ++ T +  +NG +
Sbjct: 331 IGLYAVLWGKQKENQVTICELAKIDSNSKVTEDVEANGSK 370

Arabidopsis thaliana (taxid: 3702)

>sp|F4IJ08|WTR15_ARATH WAT1-related protein At2g40900 OS=Arabidopsis thaliana GN=At2g40900 PE=2 SV=1

 Score =  285 bits (730), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 140/330 (42%), Positives = 220/330 (66%), Gaps = 8/330 (2%)

Query: 1   MDVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLE 60
           M+++ K  L++GMS YVLV YR+A AT A+APFA++ ++K+R KMT  I  ++ LL LL 
Sbjct: 25  MNLVTKTVLDRGMSHYVLVAYRNAFATAAIAPFALLSERKVRSKMTFPIFMRIFLLALLG 84

Query: 61  PVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLAT 120
           PVIDQNLY+IG+K T+ TF++A+ NI+PAIT ++A + R+E V ++ +R L KV+GTL T
Sbjct: 85  PVIDQNLYYIGLKLTSPTFSSAVSNIVPAITIILATLFRMEKVEMRKVRCLVKVMGTLVT 144

Query: 121 VAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIKGALMITAGCFSWSFFIILQA 180
           V G+++M   KGP +  F      +H   +S   T + +K A+ +     SW+ F +LQA
Sbjct: 145 VVGSILMIFYKGPFINFF-----RSHLTAASSPPTADYLKAAVFLLLASLSWASFFVLQA 199

Query: 181 ITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGL 240
            TLK Y A LS++  +CF GT++    A +ME   +++  I +D  L+AS Y+GI+ S +
Sbjct: 200 ATLKKYSAHLSMSTMVCFMGTLQSLALAFVMEHNPSAL-NIGFDMNLLASAYAGIMSSSI 258

Query: 241 TYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVW 300
            YY+QG++M+ +GPVFV AF+PL +VIV+IMS  +L + +YLG +IG ++++ G+Y V+W
Sbjct: 259 AYYVQGLMMQRKGPVFVTAFNPLIVVIVSIMSFFVLGQGIYLGGVIGVVVLMVGVYAVLW 318

Query: 301 GKSKDHKSPSPSTDEHLPPAEQTNNTGSNG 330
           GK  D        ++++   +    +G+NG
Sbjct: 319 GKHVDDDGEETRHEDNVVAVKCC--SGNNG 346

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	343
359481510	396	PREDICTED: auxin-induced protein 5NG4-li	1.0	0.866	0.705	1e-143
297741549	383	unnamed protein product [Vitis vinifera]	0.970	0.869	0.690	1e-137
224087387	348	predicted protein [Populus trichocarpa]	0.944	0.931	0.719	1e-136
356570708	383	PREDICTED: auxin-induced protein 5NG4-li	0.967	0.866	0.681	1e-131
15224291	380	nodulin MtN21 /EamA-like transporter-lik	0.982	0.886	0.659	1e-131
21553757	362	nodulin-like protein [Arabidopsis thalia	0.988	0.936	0.657	1e-130
356505132	377	PREDICTED: auxin-induced protein 5NG4-li	0.970	0.883	0.662	1e-130
388498394	386	unknown [Lotus japonicus]	0.997	0.886	0.667	1e-129
449502577	368	PREDICTED: auxin-induced protein 5NG4-li	0.947	0.883	0.679	1e-129
449448663	375	PREDICTED: auxin-induced protein 5NG4-li	0.947	0.866	0.679	1e-128

>gi|359481510|ref|XP_002274909.2| PREDICTED: auxin-induced protein 5NG4-like [Vitis vinifera]

 Score =  512 bits (1319), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 242/343 (70%), Positives = 284/343 (82%)

Query: 1   MDVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLE 60
           MDV  K ALN+G+S YVLVVYRHA AT  +APFAVILDKK+RPKMT +I TKL+LL LLE
Sbjct: 33  MDVFSKVALNQGVSNYVLVVYRHAIATAFIAPFAVILDKKVRPKMTFSIFTKLMLLSLLE 92

Query: 61  PVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLAT 120
           PVIDQNLY+ G+KYTTATFAAAMYNILPAITFLMA I  LE V LKSI S AKV+GT+AT
Sbjct: 93  PVIDQNLYYFGLKYTTATFAAAMYNILPAITFLMACIFGLEKVTLKSIHSQAKVVGTVAT 152

Query: 121 VAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIKGALMITAGCFSWSFFIILQA 180
           VAGAM+MTL+KGP++EL WTKG  N G    GT  H+SIKG+LMITAGCFSW+ FIILQA
Sbjct: 153 VAGAMLMTLVKGPVIELIWTKGRNNQGVKGGGTNIHDSIKGSLMITAGCFSWACFIILQA 212

Query: 181 ITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGL 240
           ITLK YPAELSLTAWIC  GT +GT+ AL+MERGK S+W+IHWDTK +A++YSGI+CSGL
Sbjct: 213 ITLKTYPAELSLTAWICLLGTAQGTIVALVMERGKTSVWSIHWDTKFLAALYSGIVCSGL 272

Query: 241 TYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVW 300
            YYIQG+VMKDRGPVFV AF+PL M+IVA+MS+ ILAEQMYLGR+IGAI+I+ GLY VVW
Sbjct: 273 AYYIQGVVMKDRGPVFVTAFNPLSMIIVAVMSSFILAEQMYLGRVIGAIVIVAGLYFVVW 332

Query: 301 GKSKDHKSPSPSTDEHLPPAEQTNNTGSNGKENFGHEVTKIDV 343
           GKSK++KS SPSTD  +   +Q  +  S+  EN   EV  ++V
Sbjct: 333 GKSKEYKSGSPSTDGQMVQDKQMTDASSDSNENSTPEVITLNV 375

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297741549|emb|CBI32681.3| unnamed protein product [Vitis vinifera]

 Score =  493 bits (1270), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 234/339 (69%), Positives = 276/339 (81%), Gaps = 6/339 (1%)

Query: 1   MDVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAV------ILDKKIRPKMTLAILTKLL 54
           MDV  K ALN+G+S YVLVVYRHA AT  +APFA         ++K+RPKMT +I TKL+
Sbjct: 33  MDVFSKVALNQGVSNYVLVVYRHAIATAFIAPFAKTEYKIHFFNRKVRPKMTFSIFTKLM 92

Query: 55  LLGLLEPVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKV 114
           LL LLEPVIDQNLY+ G+KYTTATFAAAMYNILPAITFLMA I  LE V LKSI S AKV
Sbjct: 93  LLSLLEPVIDQNLYYFGLKYTTATFAAAMYNILPAITFLMACIFGLEKVTLKSIHSQAKV 152

Query: 115 IGTLATVAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIKGALMITAGCFSWSF 174
           +GT+ATVAGAM+MTL+KGP++EL WTKG  N G    GT  H+SIKG+LMITAGCFSW+ 
Sbjct: 153 VGTVATVAGAMLMTLVKGPVIELIWTKGRNNQGVKGGGTNIHDSIKGSLMITAGCFSWAC 212

Query: 175 FIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSG 234
           FIILQAITLK YPAELSLTAWIC  GT +GT+ AL+MERGK S+W+IHWDTK +A++YSG
Sbjct: 213 FIILQAITLKTYPAELSLTAWICLLGTAQGTIVALVMERGKTSVWSIHWDTKFLAALYSG 272

Query: 235 IICSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGG 294
           I+CSGL YYIQG+VMKDRGPVFV AF+PL M+IVA+MS+ ILAEQMYLGR+IGAI+I+ G
Sbjct: 273 IVCSGLAYYIQGVVMKDRGPVFVTAFNPLSMIIVAVMSSFILAEQMYLGRVIGAIVIVAG 332

Query: 295 LYLVVWGKSKDHKSPSPSTDEHLPPAEQTNNTGSNGKEN 333
           LY VVWGKSK++KS SPSTD  +   +Q  +  S+  EN
Sbjct: 333 LYFVVWGKSKEYKSGSPSTDGQMVQDKQMTDASSDSNEN 371

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224087387|ref|XP_002308146.1| predicted protein [Populus trichocarpa] gi|222854122|gb|EEE91669.1| predicted protein [Populus trichocarpa]

 Score =  490 bits (1261), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 233/324 (71%), Positives = 274/324 (84%)

Query: 1   MDVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLE 60
           MD+L KAALN+GMS YVLVVYRHA AT+ +APFA ILDKK+RPKMTL+I  KL+ L LLE
Sbjct: 23  MDILSKAALNQGMSNYVLVVYRHAVATVVIAPFAAILDKKLRPKMTLSIFIKLVALSLLE 82

Query: 61  PVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLAT 120
           PVIDQNLYF+GMKYTTATFAAA+ N+LPAITF++AWI+RLE V + S+ S AK+ GT+AT
Sbjct: 83  PVIDQNLYFLGMKYTTATFAAAIVNVLPAITFIIAWIVRLEKVKIGSLHSQAKLAGTIAT 142

Query: 121 VAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIKGALMITAGCFSWSFFIILQA 180
           VAGAM+MTL+KGP++E F  KG   H +G+ G   H+SIKGALMIT GCFSW+ F+ILQA
Sbjct: 143 VAGAMLMTLMKGPLIEFFRIKGNAYHENGTGGIDLHSSIKGALMITVGCFSWACFMILQA 202

Query: 181 ITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGL 240
           ITLK+YPAELSLTAWIC  GT+EG + AL+ E GK S+WAI+WD KL+A+VYSGI CSGL
Sbjct: 203 ITLKSYPAELSLTAWICLLGTIEGAVVALVAENGKPSVWAINWDMKLLAAVYSGIFCSGL 262

Query: 241 TYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVW 300
            YYIQGIVMKDRGPVFV AFSPLCMVIVA+MS+II AEQMYLGRI+GAIII+ GLYLVVW
Sbjct: 263 AYYIQGIVMKDRGPVFVTAFSPLCMVIVAVMSSIIWAEQMYLGRILGAIIIVAGLYLVVW 322

Query: 301 GKSKDHKSPSPSTDEHLPPAEQTN 324
           GKSKD+K+ SP  DE   P +QT 
Sbjct: 323 GKSKDYKTSSPPADEQTIPVKQTT 346

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356570708|ref|XP_003553527.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 227/333 (68%), Positives = 271/333 (81%), Gaps = 1/333 (0%)

Query: 1   MDVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLE 60
           MDVL KAALNKGMS YV VVYRH  A +  APFA+IL+KK+RPKMT +I  K+++L LLE
Sbjct: 28  MDVLSKAALNKGMSNYVFVVYRHVFAFVVTAPFALILEKKVRPKMTFSIFMKIMILSLLE 87

Query: 61  PVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLAT 120
           PVIDQNLYF+GMKYTTATFA +MYN+LPAITF+MAWI RLE V LKSIRS AKV+GTLAT
Sbjct: 88  PVIDQNLYFLGMKYTTATFAVSMYNVLPAITFVMAWIFRLEKVKLKSIRSQAKVVGTLAT 147

Query: 121 VAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIKGALMITAGCFSWSFFIILQA 180
           VAGAMVMTLIKGP+L+LF T  +  H   + G    ++IKG++MIT GCFS + F+ILQA
Sbjct: 148 VAGAMVMTLIKGPVLDLFGTHTSNTHNQQNGGVNLQHAIKGSVMITIGCFSCACFMILQA 207

Query: 181 ITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGL 240
           IT++AYPAELSLTAWIC  GTVEG + AL+MER   S W++ WDTKL+A+VYSGI+CSG+
Sbjct: 208 ITIEAYPAELSLTAWICLLGTVEGGVVALVMERKNLSAWSLQWDTKLLAAVYSGIVCSGM 267

Query: 241 TYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVW 300
            YYIQG VMKDRGPVFV  F+PLCMVIVAIM +  LAE MYLGR +GAI+II GLYLVVW
Sbjct: 268 AYYIQGAVMKDRGPVFVTTFNPLCMVIVAIMGSFFLAEIMYLGRAVGAIVIILGLYLVVW 327

Query: 301 GKSKDHKSPSPSTDEHLPPAEQTNNTGSNGKEN 333
           GKS+D++S SP T EH+  ++QT    +NGKE 
Sbjct: 328 GKSQDYESSSPITKEHILASKQTVEE-NNGKEE 359

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15224291|ref|NP_181282.1| nodulin MtN21 /EamA-like transporter-like protein [Arabidopsis thaliana] gi|4056506|gb|AAC98072.1| nodulin-like protein [Arabidopsis thaliana] gi|14334858|gb|AAK59607.1| putative nodulin protein [Arabidopsis thaliana] gi|14994253|gb|AAK73261.1| nodulin-like protein [Arabidopsis thaliana] gi|17104641|gb|AAL34209.1| putative nodulin protein [Arabidopsis thaliana] gi|330254309|gb|AEC09403.1| nodulin MtN21 /EamA-like transporter-like protein [Arabidopsis thaliana]

 Score =  472 bits (1215), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 227/344 (65%), Positives = 271/344 (78%), Gaps = 7/344 (2%)

Query: 1   MDVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLE 60
           MD+L KA LNKGMS YVLVVYRHA ATI MAPFA   DKK+RPKMTL I  K+ LLGLLE
Sbjct: 29  MDILSKAVLNKGMSNYVLVVYRHAVATIVMAPFAFYFDKKVRPKMTLMIFFKISLLGLLE 88

Query: 61  PVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLAT 120
           PVIDQNLY++GMKYTTATFA AMYN+LPAITF++A+I  LE V L+ IRS  KV+GTLAT
Sbjct: 89  PVIDQNLYYLGMKYTTATFATAMYNVLPAITFVLAYIFGLERVKLRCIRSTGKVVGTLAT 148

Query: 121 VAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIKGALMITAGCFSWSFFIILQA 180
           V GAM+MTL+KGP+L+LFWTKG     H ++GT  H++IKGA+++T GCFS++ F+ILQA
Sbjct: 149 VGGAMIMTLVKGPVLDLFWTKGVS--AHNTAGTDIHSAIKGAVLVTIGCFSYACFMILQA 206

Query: 181 ITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGL 240
           ITL+ YPAELSLTAWIC  GT+EGT  AL+ME+G  S WAI WDTKL+ + YSGI+CS L
Sbjct: 207 ITLRTYPAELSLTAWICLMGTIEGTAVALVMEKGNPSAWAIGWDTKLLTATYSGIVCSAL 266

Query: 241 TYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVW 300
            YY+ G+VMK RGPVFV AFSPLCM+IVAIMSTII AEQMYLGR++GA++I  GLYLV+W
Sbjct: 267 AYYVGGVVMKTRGPVFVTAFSPLCMIIVAIMSTIIFAEQMYLGRVLGAVVICAGLYLVIW 326

Query: 301 GKSKDHKSPS--PSTDEHLPPAEQTNNTGSNGKENFGHEVTKID 342
           GK KD+K  S     DE   P  + +    NGK+N  HEV  I 
Sbjct: 327 GKGKDYKYNSTLQLDDESAQPKLELSG---NGKDNVDHEVITIS 367

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21553757|gb|AAM62850.1| nodulin-like protein [Arabidopsis thaliana]

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 225/342 (65%), Positives = 270/342 (78%), Gaps = 3/342 (0%)

Query: 1   MDVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLE 60
           MD+L KA LNKGMS YVLVVYRHA ATI MAPFA   DKK+RPKMTL I  K+ LLGLLE
Sbjct: 11  MDILSKAVLNKGMSNYVLVVYRHAVATIVMAPFAFYFDKKVRPKMTLMIFFKISLLGLLE 70

Query: 61  PVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLAT 120
           PVIDQNLY++GMKYTTATFA AMYN+LPAITF++A+I  LE V L+ IRS  KV+GTLAT
Sbjct: 71  PVIDQNLYYLGMKYTTATFATAMYNVLPAITFVLAYIFGLERVKLRCIRSTGKVVGTLAT 130

Query: 121 VAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIKGALMITAGCFSWSFFIILQA 180
           V GAM+MTL+KGP+L+LFWTKG     H ++GT  H++IKGA+++T GCFS++ F+ILQA
Sbjct: 131 VGGAMIMTLVKGPVLDLFWTKGVS--AHNTAGTDIHSAIKGAVLVTIGCFSYACFMILQA 188

Query: 181 ITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGL 240
           ITL+ YPAELSLTAWIC  GT+EGT  AL+ME+G  S WAI WDTKL+ + YSGI+CS L
Sbjct: 189 ITLRTYPAELSLTAWICLMGTIEGTAVALVMEKGNPSAWAIGWDTKLLTATYSGIVCSAL 248

Query: 241 TYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVW 300
            YY+ G+VMK RGPVFV AFSPLCM+IVAIMSTII AEQMYLGR++GA++I  GLYLV+W
Sbjct: 249 AYYVGGVVMKTRGPVFVTAFSPLCMIIVAIMSTIIFAEQMYLGRVLGAVVICAGLYLVIW 308

Query: 301 GKSKDHKSPSPSTDEHLPPAEQTNNTGSNGKENFGHEVTKID 342
           GK KD+K  S    +      +   +G NGK+N  HEV  I 
Sbjct: 309 GKGKDYKYNSTLQLDDKSAQPKLELSG-NGKDNVDHEVITIS 349

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356505132|ref|XP_003521346.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]

 Score =  470 bits (1210), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 224/338 (66%), Positives = 272/338 (80%), Gaps = 5/338 (1%)

Query: 1   MDVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLE 60
           MD+L KAALNKGMS YV VVYRH  A + MAPFA+IL+KK+RPKMT +I  K+++L LLE
Sbjct: 28  MDILSKAALNKGMSNYVFVVYRHVFAFVVMAPFALILEKKVRPKMTFSIFMKIMILSLLE 87

Query: 61  PVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLAT 120
           PVIDQNLYF+GMKYTTATFA +MYN+LPAITF+MAWI+RLE V LKSIRS AKV+GTLAT
Sbjct: 88  PVIDQNLYFLGMKYTTATFAVSMYNVLPAITFVMAWILRLEKVKLKSIRSQAKVVGTLAT 147

Query: 121 VAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIKGALMITAGCFSWSFFIILQA 180
           V GAMVMTLIKGPIL+LF T  +  H   + G    ++IKG++MIT GCFS + F+ILQA
Sbjct: 148 VVGAMVMTLIKGPILDLFGTHASSTHNQQNGGVNLQHAIKGSVMITIGCFSCACFMILQA 207

Query: 181 ITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGL 240
           IT++AYPAELSLTAWIC  GTVEG + AL+MER   S W++ WDTKL+A+VYSGI+CSG+
Sbjct: 208 ITIEAYPAELSLTAWICLLGTVEGGVVALVMERKNLSAWSLQWDTKLLAAVYSGIVCSGM 267

Query: 241 TYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVW 300
            YYIQG VMKDRGPVFV  F+PLCMVIVAIM +  LAE MYLGR++GAI+II GLYLVVW
Sbjct: 268 AYYIQGAVMKDRGPVFVTTFNPLCMVIVAIMGSFFLAEIMYLGRVVGAIVIILGLYLVVW 327

Query: 301 GKSKDHKSPSPSTDEHLPPAEQTNNTGSNGKENFGHEV 338
           GKS D++S +  T +H  P++QT       +E+  H+V
Sbjct: 328 GKSNDYESSNSITKKHTLPSKQTVE-----EEHSNHDV 360

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388498394|gb|AFK37263.1| unknown [Lotus japonicus]

 Score =  467 bits (1201), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 231/346 (66%), Positives = 281/346 (81%), Gaps = 4/346 (1%)

Query: 1   MDVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLE 60
           MDVLCKAALN GMS YVLVVYRHA A + M PFA+ILDKKIRPKMT +I  K++LL LLE
Sbjct: 28  MDVLCKAALNNGMSNYVLVVYRHAVAFVVMVPFALILDKKIRPKMTFSIFVKIVLLSLLE 87

Query: 61  PVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLAT 120
           PVIDQNLY++GMKYTTATFA +MYNILPAITFLMA+I++LE + +KSIRS AKV GTLAT
Sbjct: 88  PVIDQNLYYLGMKYTTATFAVSMYNILPAITFLMAYILKLEKIKIKSIRSQAKVFGTLAT 147

Query: 121 VAGAMVMTLIKGPILELFWTK-GAENHGHGSSGTTTHNSIKGALMITAGCFSWSFFIILQ 179
           VAGAMVMTLIKGP LELF T  G+  H   + G    ++IKG++MIT GCFS++ F+ILQ
Sbjct: 148 VAGAMVMTLIKGPELELFGTHGGSSTHIQHNGGVNLQHAIKGSVMITIGCFSFAGFMILQ 207

Query: 180 AITLKAYPAELSLTAWICFFGTVEGTLAALIMERGK-ASIWAIHWDTKLVASVYSGIICS 238
           AITL+AYPA+LSLTAWIC  GTVEG + AL+MERG  A +W+++W+T L+A+VY GI+CS
Sbjct: 208 AITLEAYPADLSLTAWICLLGTVEGGIVALVMERGNPAPVWSLNWNTSLLAAVYGGIVCS 267

Query: 239 GLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLV 298
           G+TYYIQG VMK +GPVFV  FSPLCM+IVAI+ + ILAEQMYLGR+IGAI+I+ GLYLV
Sbjct: 268 GMTYYIQGAVMKYKGPVFVTTFSPLCMIIVAILGSFILAEQMYLGRVIGAIVILLGLYLV 327

Query: 299 VWGKSKDHKS-PSPSTDEHLPPAEQTNNTGSNGKEN-FGHEVTKID 342
           VWGK+KD+ S PSP  +EH+ P +QT  + +  KE    HE+  I 
Sbjct: 328 VWGKNKDYDSPPSPIINEHVLPDKQTIESNAKDKEKPSNHELITIS 373

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449502577|ref|XP_004161682.1| PREDICTED: auxin-induced protein 5NG4-like [Cucumis sativus]

 Score =  466 bits (1200), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 223/328 (67%), Positives = 269/328 (82%), Gaps = 3/328 (0%)

Query: 1   MDVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLE 60
           MD+L KAALN+GMS YVLVVYRHA ATI +APFA+I DKK+RPKMT+ +  KL++L LLE
Sbjct: 21  MDILSKAALNQGMSNYVLVVYRHAVATIVIAPFALIFDKKVRPKMTIPVFAKLMVLSLLE 80

Query: 61  PVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLAT 120
           PVIDQNLYF+GMKYTTATFAAAM NILPAITF+MAWI+RLE V +KSIRS AK++GT+AT
Sbjct: 81  PVIDQNLYFMGMKYTTATFAAAMCNILPAITFVMAWILRLEKVRIKSIRSQAKIVGTVAT 140

Query: 121 VAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIKGALMITAGCFSWSFFIILQA 180
           V GAM+MTL+KGPI+ELFW K   N+       +  ++IKG++MIT GCFSW+ F+ILQA
Sbjct: 141 VGGAMIMTLMKGPIVELFWVKERANNPQQRGEISLQHTIKGSIMITIGCFSWACFMILQA 200

Query: 181 ITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGL 240
           ITLKAYPAELSLTAWIC  GT EGT+ AL+MERG  ++W+I W TKL+A+VYSGI CSGL
Sbjct: 201 ITLKAYPAELSLTAWICLLGTAEGTVVALVMERGNPAVWSITWGTKLLAAVYSGIFCSGL 260

Query: 241 TYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVW 300
            YYIQG+VMKD+GPVFV AFSPL MVIVAIMS+ IL E++Y GR++GA++II GLYLVVW
Sbjct: 261 AYYIQGLVMKDKGPVFVTAFSPLSMVIVAIMSSFILGERLYFGRVLGAVVIIVGLYLVVW 320

Query: 301 GKSKDHKSPSPSTDEHLPPAE--QTNNT 326
           GK+KD    S S D  LP  +  + N T
Sbjct: 321 GKNKDENC-SSSEDLKLPTKQILEDNKT 347

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449448663|ref|XP_004142085.1| PREDICTED: auxin-induced protein 5NG4-like [Cucumis sativus]

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 223/328 (67%), Positives = 269/328 (82%), Gaps = 3/328 (0%)

Query: 1   MDVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLE 60
           MD+L KAALN+GMS YVLVVYRHA ATI +APFA+I DKK+RPKMT+ +  KL++L LLE
Sbjct: 28  MDILSKAALNQGMSNYVLVVYRHAVATIVIAPFALIFDKKVRPKMTIPVFAKLMVLSLLE 87

Query: 61  PVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLAT 120
           PVIDQNLYF+GMKYTTATFAAAM NILPAITF+MAWI+RLE V +KSIRS AK++GT+AT
Sbjct: 88  PVIDQNLYFMGMKYTTATFAAAMCNILPAITFVMAWILRLEKVRIKSIRSQAKIVGTVAT 147

Query: 121 VAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIKGALMITAGCFSWSFFIILQA 180
           V GAM+MTL+KGPI+ELFW K   N+       +  ++IKG++MIT GCFSW+ F+ILQA
Sbjct: 148 VGGAMIMTLMKGPIVELFWVKERANNPQQRGEISLQHTIKGSIMITIGCFSWACFMILQA 207

Query: 181 ITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGL 240
           ITLKAYPAELSLTAWIC  GT EGT+ AL+MERG  ++W+I W TKL+A+VYSGI CSGL
Sbjct: 208 ITLKAYPAELSLTAWICLLGTAEGTVVALVMERGNPAVWSITWGTKLLAAVYSGIFCSGL 267

Query: 241 TYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVW 300
            YYIQG+VMKD+GPVFV AFSPL MVIVAIMS+ IL E++Y GR++GA++II GLYLVVW
Sbjct: 268 AYYIQGLVMKDKGPVFVTAFSPLSMVIVAIMSSFILGERLYFGRVLGAVVIIVGLYLVVW 327

Query: 301 GKSKDHKSPSPSTDEHLPPAE--QTNNT 326
           GK+KD    S S D  LP  +  + N T
Sbjct: 328 GKNKDENC-SSSEDLKLPTKQILEDNKT 354

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	343
TAIR|locus:2049847	380	UMAMIT12 "Usually multiple aci	0.979	0.884	0.620	1.6e-111
TAIR|locus:2049837	336	UMAMIT13 "Usually multiple aci	0.752	0.767	0.613	4.2e-96
TAIR|locus:2039792	374	UMAMIT14 "AT2G39510" [Arabidop	0.927	0.850	0.557	2.4e-92
TAIR|locus:2132457	373	UMAMIT17 "Usually multiple aci	0.883	0.812	0.514	1.6e-79
TAIR|locus:2201148	389	UMAMIT19 "Usually multiple aci	0.924	0.814	0.481	3.8e-78
TAIR|locus:2132447	384	UMAMIT20 "Usually multiple aci	0.886	0.791	0.459	1.6e-77
TAIR|locus:2194864	370	SIAR1 "Siliques Are Red 1" [Ar	0.970	0.9	0.451	2.7e-75
TAIR|locus:2173189	377	UMAMIT15 "Usually multiple aci	0.886	0.806	0.474	3.1e-74
TAIR|locus:2169414	402	UMAMIT9 "Usually multiple acid	0.892	0.761	0.453	1.6e-72
TAIR|locus:2058460	394	UMAMIT11 "Usually multiple aci	0.938	0.817	0.396	7.6e-64

TAIR|locus:2049847 UMAMIT12 "Usually multiple acids move in and out Transporters 12" [Arabidopsis thaliana (taxid:3702)]

 Score = 1101 (392.6 bits), Expect = 1.6e-111, P = 1.6e-111
 Identities = 213/343 (62%), Positives = 252/343 (73%)

Query:     1 MDVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTXXXXXXXXXXXXXE 60
             MD+L KA LNKGMS YVLVVYRHA ATI MAPFA   DKK+RPKMT             E
Sbjct:    29 MDILSKAVLNKGMSNYVLVVYRHAVATIVMAPFAFYFDKKVRPKMTLMIFFKISLLGLLE 88

Query:    61 PVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLAT 120
             PVIDQNLY++GMKYTTATFA AMYN+LPAITF++A+I  LE V L+ IRS  KV+GTLAT
Sbjct:    89 PVIDQNLYYLGMKYTTATFATAMYNVLPAITFVLAYIFGLERVKLRCIRSTGKVVGTLAT 148

Query:   121 VAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIKGALMITAGCFSWSFFIILQA 180
             V GAM+MTL+KGP+L+LFWTKG     H ++GT  H++IKGA+++T GCFS++ F+ILQA
Sbjct:   149 VGGAMIMTLVKGPVLDLFWTKGVS--AHNTAGTDIHSAIKGAVLVTIGCFSYACFMILQA 206

Query:   181 ITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGL 240
             ITL+ YPAELSLTAWIC  GT+EGT  AL+ME+G  S WAI WDTKL+ + YSGI+CS L
Sbjct:   207 ITLRTYPAELSLTAWICLMGTIEGTAVALVMEKGNPSAWAIGWDTKLLTATYSGIVCSAL 266

Query:   241 TYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLXXXXXXXXXXXXLYLVVW 300
              YY+ G+VMK RGPVFV AFSPLCM+IVAIMSTII AEQMYL            LYLV+W
Sbjct:   267 AYYVGGVVMKTRGPVFVTAFSPLCMIIVAIMSTIIFAEQMYLGRVLGAVVICAGLYLVIW 326

Query:   301 GKSKDHK--SPSPSTDEHLPPAEQTNNTGSNGKENFGHEVTKI 341
             GK KD+K  S     DE   P  + +    NGK+N  HEV  I
Sbjct:   327 GKGKDYKYNSTLQLDDESAQPKLELSG---NGKDNVDHEVITI 366

GO:0005737 "cytoplasm" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

TAIR|locus:2049837 UMAMIT13 "Usually multiple acids move in and out Transporters 13" [Arabidopsis thaliana (taxid:3702)]

 Score = 847 (303.2 bits), Expect = 4.2e-96, Sum P(2) = 4.2e-96
 Identities = 160/261 (61%), Positives = 196/261 (75%)

Query:    61 PVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLAT 120
             PVI QNL+ +GMKYTTATFA A+YN LPA+TF++A I RLE+V  +SIRS AKV+GT+ T
Sbjct:    62 PVIAQNLFNLGMKYTTATFAIALYNTLPAVTFILALIFRLESVKFQSIRSAAKVVGTVTT 121

Query:   121 VAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIKGALMITAGCFSWSFFIILQA 180
             V G MVMTL+KGP L+LFWTKG       + GT  H+SIKGA+++T GCFS++ F+ILQA
Sbjct:   122 VGGIMVMTLVKGPALDLFWTKGPS--AQNTVGTDIHSSIKGAVLVTIGCFSYACFMILQA 179

Query:   181 ITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGL 240
             ITLK YPAELSL  WIC  GT+EG + AL+ME+G  S+WAI WDTKL+   YSGI+CS L
Sbjct:   180 ITLKTYPAELSLATWICLIGTIEGVVVALVMEKGNPSVWAIGWDTKLLTITYSGIVCSAL 239

Query:   241 TYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLXXXXXXXXXXXXLYLVVW 300
              YYI G+VMK RGPVFV AF PLCM++VAIMS+II  EQMYL            LYLV+W
Sbjct:   240 GYYIGGVVMKTRGPVFVTAFKPLCMIVVAIMSSIIFDEQMYLGRALGATVICVGLYLVIW 299

Query:   301 GKSKDHKSPS-PSTDEHLPPA 320
             GK+KD++ PS P  D+ L  A
Sbjct:   300 GKAKDYEYPSTPQIDDDLAQA 320

GO:0016020 "membrane" evidence=IEA

GO:0016556 "mRNA modification" evidence=RCA

TAIR|locus:2039792 UMAMIT14 "AT2G39510" [Arabidopsis thaliana (taxid:3702)]

 Score = 920 (328.9 bits), Expect = 2.4e-92, P = 2.4e-92
 Identities = 178/319 (55%), Positives = 223/319 (69%)

Query:     1 MDVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTXXXXXXXXXXXXXE 60
             + ++ K ALN+GMSP+VL  YRH  ATI +APFA  LD+KIRPKMT             E
Sbjct:    22 LSIIAKFALNQGMSPHVLASYRHIVATIFIAPFAYFLDRKIRPKMTLSIFFKILLLGLLE 81

Query:    61 PVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLAT 120
             P IDQNLY+ GMKYT+ATF AAM N+LPA  F+MAWI RLE VN+K I S AK++GT+ T
Sbjct:    82 PTIDQNLYYTGMKYTSATFTAAMTNVLPAFAFIMAWIFRLEKVNVKKIHSQAKILGTIVT 141

Query:   121 VAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIKGALMITAGCFSWSFFIILQA 180
             V GAM+MT++KGP++ L W    + H   S+     +  KGA +I  GC  W+ FI LQA
Sbjct:   142 VGGAMLMTVVKGPLIPLPWANPHDIHQDSSNTGVKQDLTKGASLIAIGCICWAGFINLQA 201

Query:   181 ITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGL 240
             ITLK+YP ELSLTA+ICF G++E T+ AL +ERG  S WAIH D+KL+A+VY G+ICSG+
Sbjct:   202 ITLKSYPVELSLTAYICFLGSIESTIVALFIERGNPSAWAIHLDSKLLAAVYGGVICSGI 261

Query:   241 TYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLXXXXXXXXXXXXLYLVVW 300
              YY+QG++MK RGPVFV AF+PL MVIVAI+ +IILAE M+L            LY V+W
Sbjct:   262 GYYVQGVIMKTRGPVFVTAFNPLSMVIVAILGSIILAEVMFLGRILGAIVIVLGLYSVLW 321

Query:   301 GKSKDHKSPSPST-DEHLP 318
             GKSKD  S S S  D+ LP
Sbjct:   322 GKSKDEPSSSFSDMDKELP 340

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2132457 UMAMIT17 "Usually multiple acids move in and out Transporters 17" [Arabidopsis thaliana (taxid:3702)]

 Score = 799 (286.3 bits), Expect = 1.6e-79, P = 1.6e-79
 Identities = 159/309 (51%), Positives = 207/309 (66%)

Query:     1 MDVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTXXXXXXXXXXXXXE 60
             M ++   +   GM+ ++L  YRH  ATI +APFA+IL++KIRPKMT             E
Sbjct:    25 MYIITMVSFKHGMNHWILATYRHVVATIVIAPFALILERKIRPKMTWPLFLRILALGFLE 84

Query:    61 PVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLAT 120
             P++DQNLY+IGMK T+AT+++A  N LPAITF+MA I R+E VNLK  RSLAKVIGT  T
Sbjct:    85 PLLDQNLYYIGMKATSATYSSAFVNALPAITFIMAVIFRIETVNLKKTRSLAKVIGTAIT 144

Query:   121 VAGAMVMTLIKGPILELFWTKGAENHGHGSSGT----TTHNSIKGALMITAGCFSWSFFI 176
             V GAMVMTL KGP +ELF T  +  HG GSSGT    T  N + G L +     +W+ F 
Sbjct:   145 VGGAMVMTLYKGPAIELFKTAHSSLHG-GSSGTSSETTDQNWVTGTLAVMGSITTWAGFF 203

Query:   177 ILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGII 236
             ILQ+ TLK YPAELSL  WIC  GTV  T+A+LIM R   S W +  D+  +A+VYSG++
Sbjct:   204 ILQSFTLKKYPAELSLVMWICAMGTVLNTIASLIMVRD-VSAWKVGMDSGTLAAVYSGVV 262

Query:   237 CSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLXXXXXXXXXXXXLY 296
             CSG+ YYIQ IV+++RGPVF  +FSP+CM+I A +  ++LAE+++L            LY
Sbjct:   263 CSGMAYYIQSIVIRERGPVFTTSFSPMCMIITAFLGVLVLAEKIHLGSIIGAIFIVFGLY 322

Query:   297 LVVWGKSKD 305
              VVWGK+KD
Sbjct:   323 SVVWGKAKD 331

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2201148 UMAMIT19 "Usually multiple acids move in and out Transporters 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 786 (281.7 bits), Expect = 3.8e-78, P = 3.8e-78
 Identities = 158/328 (48%), Positives = 211/328 (64%)

Query:     1 MDVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTXXXXXXXXXXXXXE 60
             M ++   +L  GM+ YVL VYRHA AT  +APFA+  ++KIRPKMT             E
Sbjct:    25 MYIITMVSLKHGMNHYVLAVYRHAIATAVIAPFALFHERKIRPKMTFRIFLQIALLGFIE 84

Query:    61 PVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLAT 120
             PV+DQNLY++GM YT+ATFA+A  N+LPAITF++A I RLE+VN K +RS+AKV+GT+ T
Sbjct:    85 PVLDQNLYYVGMTYTSATFASATANVLPAITFVLAIIFRLESVNFKKVRSIAKVVGTVIT 144

Query:   121 VAGAMVMTLIKGPILELFWTKGAENHG-------HGSSGTTTHNS--IKGALMITAGCFS 171
             V+GA++MTL KGPI++     G    G       HG +G    +   I G LM+    F 
Sbjct:   145 VSGALLMTLYKGPIVDFIRFGGGGGGGSDGAGGSHGGAGAAAMDKHWIPGTLMLLGRTFG 204

Query:   172 WSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASV 231
             W+ F ILQ+ TLK YPAELSLT  IC  GT+EGT  +L+  R   S W I +D+ L A+ 
Sbjct:   205 WAGFFILQSFTLKQYPAELSLTTLICLMGTLEGTAVSLVTVRD-LSAWKIGFDSNLFAAA 263

Query:   232 YSGIICSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLXXXXXXXXX 291
             YSG+ICSG+ YY+QG+VM++RGPVFVA F+PLC+VI A +  ++L+E ++L         
Sbjct:   264 YSGVICSGVAYYVQGVVMRERGPVFVATFNPLCVVITAALGVVVLSESIHLGSVIGTLFI 323

Query:   292 XXXLYLVVWGKSKDHKSPSPSTD-EHLP 318
                LY VVWGK KD +      D + LP
Sbjct:   324 IVGLYTVVWGKGKDKRMTDDDEDCKGLP 351

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2132447 UMAMIT20 "Usually multiple acids move in and out Transporters 20" [Arabidopsis thaliana (taxid:3702)]

 Score = 780 (279.6 bits), Expect = 1.6e-77, P = 1.6e-77
 Identities = 141/307 (45%), Positives = 212/307 (69%)

Query:     3 VLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTXXXXXXXXXXXXXEPV 62
             ++  A LN+G + YV++VYR+  A + +APFA+I ++K+RPKMT             EPV
Sbjct:    29 IVIMATLNQGQNRYVVIVYRNLVAALVLAPFALIFERKVRPKMTLSVLWKIMALGFLEPV 88

Query:    63 IDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVA 122
             +DQ   ++GM  T+AT+ +A+ NILP++TF++AWI+R+E VN+  +RS AK+IGTL  + 
Sbjct:    89 LDQGFGYLGMNMTSATYTSAIMNILPSVTFIIAWILRMEKVNIAEVRSKAKIIGTLVGLG 148

Query:   123 GAMVMTLIKGPILELFWTKGA--ENHGHGSSGTTTHNSIKGALMITAGCFSWSFFIILQA 180
             GA+VMTL KGP++ L W+     + +GH ++    +N + G L+I  GC +WS F +LQ+
Sbjct:   149 GALVMTLYKGPLIPLPWSNPNMDQQNGHTNNSQDHNNWVVGTLLILLGCVAWSGFYVLQS 208

Query:   181 ITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGL 240
             IT+K YPA+LSL+A IC  G V+    AL++ER  +  WA+ WD +L A +Y+GI+ SG+
Sbjct:   209 ITIKTYPADLSLSALICLAGAVQSFAVALVVERHPSG-WAVGWDARLFAPLYTGIVSSGI 267

Query:   241 TYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLXXXXXXXXXXXXLYLVVW 300
             TYY+QG+VMK RGPVFV AF+PLCM++VA++++ IL EQ++             LY+VVW
Sbjct:   268 TYYVQGMVMKTRGPVFVTAFNPLCMILVALIASFILHEQIHFGCVIGGAVIAAGLYMVVW 327

Query:   301 GKSKDHK 307
             GK KD++
Sbjct:   328 GKGKDYE 334

GO:0005576 "extracellular region" evidence=ISM

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2194864 SIAR1 "Siliques Are Red 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 759 (272.2 bits), Expect = 2.7e-75, P = 2.7e-75
 Identities = 154/341 (45%), Positives = 213/341 (62%)

Query:     1 MDVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTXXXXXXXXXXXXXE 60
             M ++   +   GM  +VL  YRH  AT+ MAPFA++ ++KIRPKMT             E
Sbjct:    25 MYIITMVSFKHGMDHWVLATYRHVVATVVMAPFALMFERKIRPKMTLAIFWRLLALGILE 84

Query:    61 PVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLAT 120
             P++DQNLY+IG+K T+A++ +A  N LPA+TF++A I RLE VN + + S+AKV+GT+ T
Sbjct:    85 PLMDQNLYYIGLKNTSASYTSAFTNALPAVTFILALIFRLETVNFRKVHSVAKVVGTVIT 144

Query:   121 VAGAMVMTLIKGPILELFWTKGAENHGHG-SSGTTT-HNSIKGALMITAGCFSWSFFIIL 178
             V GAM+MTL KGP +E+   K A N  HG SS T T  + + G + I     +W+ F IL
Sbjct:   145 VGGAMIMTLYKGPAIEI--VKAAHNSFHGGSSSTPTGQHWVLGTIAIMGSISTWAAFFIL 202

Query:   179 QAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICS 238
             Q+ TLK YPAELSL   IC  GT+   +A+LIM R   S W I  D+  +A+VYSG++CS
Sbjct:   203 QSYTLKVYPAELSLVTLICGIGTILNAIASLIMVRDP-SAWKIGMDSGTLAAVYSGVVCS 261

Query:   239 GLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLXXXXXXXXXXXXLYLV 298
             G+ YYIQ IV+K RGPVF  +FSP+CM+I A +  ++LAE+++L            LY V
Sbjct:   262 GIAYYIQSIVIKQRGPVFTTSFSPMCMIITAFLGALVLAEKIHLGSIIGAVFIVLGLYSV 321

Query:   299 VWGKSKDHKSPSPSTDEHLPPAEQTNNTGSNGKENFGHEVT 339
             VWGKSKD  +P    DE +    Q     +  K+  GH+V+
Sbjct:   322 VWGKSKDEVNP---LDEKIVAKSQELPITNVVKQTNGHDVS 359

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

GO:0005515 "protein binding" evidence=IPI

GO:0005886 "plasma membrane" evidence=IDA

GO:0006865 "amino acid transport" evidence=IDA

GO:0015171 "amino acid transmembrane transporter activity" evidence=IDA

GO:0032973 "amino acid export" evidence=IDA

GO:0034639 "L-amino acid efflux transmembrane transporter activity" evidence=IDA

GO:0043090 "amino acid import" evidence=IDA

GO:0080144 "amino acid homeostasis" evidence=IMP

TAIR|locus:2173189 UMAMIT15 "Usually multiple acids move in and out Transporters 15" [Arabidopsis thaliana (taxid:3702)]

 Score = 749 (268.7 bits), Expect = 3.1e-74, P = 3.1e-74
 Identities = 146/308 (47%), Positives = 202/308 (65%)

Query:     1 MDVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTXXXXXXXXXXXXXE 60
             M ++ K ALNKGMSP+VLV YR A A+  + PFA+IL++  RPK+T             E
Sbjct:    22 MSIVAKLALNKGMSPHVLVAYRMAVASALITPFALILERNTRPKLTFKILLQIAILSLFE 81

Query:    61 PVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLAT 120
             PV++QNLY+ GMK TTATF +A+ N LPA+TF+MA + +LE V ++   S AK++GT+  
Sbjct:    82 PVVEQNLYYSGMKLTTATFTSALCNALPAMTFIMACVFKLEKVTIERRHSQAKLVGTMVA 141

Query:   121 VAGAMVMTLIKGPILELFWT---KGAENHGHGSSGTTTHNSIKGALMITAGCFSWSFFII 177
             + GAM+MT +KG ++EL WT   +G   H H        +  +G++M+ A CFSWS +II
Sbjct:   142 IGGAMLMTFVKGNVIELPWTSNSRGLNGHTHAMRIPKQADIARGSIMLVASCFSWSCYII 201

Query:   178 LQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIIC 237
             LQA  L  Y AELSLTA +C  G +E T+  LI ER   S+W I+ D  L+AS+Y G++ 
Sbjct:   202 LQAKILAQYKAELSLTALMCIMGMLEATVMGLIWERKNMSVWKINPDVTLLASIYGGLV- 260

Query:   238 SGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLXXXXXXXXXXXXLYL 297
             SGL YY+ G   K+RGPVFV+AF+PL MV+VAI+ST +  E++Y+            +YL
Sbjct:   261 SGLAYYVIGWASKERGPVFVSAFNPLSMVLVAILSTFVFLEKVYVGRVIGSVVIVIGIYL 320

Query:   298 VVWGKSKD 305
             V+WGKSKD
Sbjct:   321 VLWGKSKD 328

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2169414 UMAMIT9 "Usually multiple acids move in and out Transporters 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
 Identities = 143/315 (45%), Positives = 207/315 (65%)

Query:     1 MDVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTXXXXXXXXXXXXXE 60
             M+++ K +LN GMS YVLVVYRHA AT  +APFA   ++K +PK+T              
Sbjct:    32 MNIITKISLNTGMSHYVLVVYRHAIATAVIAPFAFFFERKAQPKITFSIFMQLFILGLLG 91

Query:    61 PVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLAT 120
             PVIDQN Y++G+KYT+ TF+ AM N+LPA+TF++A + R+E ++LK +   AK+ GT+ T
Sbjct:    92 PVIDQNFYYMGLKYTSPTFSCAMSNMLPAMTFILAVLFRMEMLDLKKLWCQAKIAGTVVT 151

Query:   121 VAGAMVMTLIKGPILELFWTK--GAENHGHGSSGTTTHNS-----IKGALMITAGCFSWS 173
             VAGAM+MT+ KGPI+ELFWTK    ++  H ++ ++ ++S     +KG++++     +W+
Sbjct:   152 VAGAMLMTIYKGPIVELFWTKYMHIQDSSHANTTSSKNSSSDKEFLKGSILLIFATLAWA 211

Query:   174 FFIILQAITLKAYPA-ELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVY 232
                +LQA  LK Y   +LSLT  ICF GT++      +ME    S W I WD  L+A+ Y
Sbjct:   212 SLFVLQAKILKTYAKHQLSLTTLICFIGTLQAVAVTFVMEHNP-SAWRIGWDMNLLAAAY 270

Query:   233 SGIICSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLXXXXXXXXXX 292
             SGI+ S ++YY+QGIVMK RGPVF  AFSPL MVIVA+M + +LAE+++L          
Sbjct:   271 SGIVASSISYYVQGIVMKKRGPVFATAFSPLMMVIVAVMGSFVLAEKIFLGGVIGAVLIV 330

Query:   293 XXLYLVVWGKSKDHK 307
               LY V+WGK K+++
Sbjct:   331 IGLYAVLWGKQKENQ 345

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2058460 UMAMIT11 "Usually multiple acids move in and out Transporters 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 651 (234.2 bits), Expect = 7.6e-64, P = 7.6e-64
 Identities = 131/330 (39%), Positives = 204/330 (61%)

Query:     1 MDVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTXXXXXXXXXXXXXE 60
             M+++ K  L++GMS YVLV YR+A AT A+APFA++ ++K+R KMT              
Sbjct:    25 MNLVTKTVLDRGMSHYVLVAYRNAFATAAIAPFALLSERKVRSKMTFPIFMRIFLLALLG 84

Query:    61 PVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLAT 120
             PVIDQNLY+IG+K T+ TF++A+ NI+PAIT ++A + R+E V ++ +R L KV+GTL T
Sbjct:    85 PVIDQNLYYIGLKLTSPTFSSAVSNIVPAITIILATLFRMEKVEMRKVRCLVKVMGTLVT 144

Query:   121 VAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIKGALMITAGCFSWSFFIILQA 180
             V G+++M   KGP +  F      +H   +S   T + +K A+ +     SW+ F +LQA
Sbjct:   145 VVGSILMIFYKGPFINFF-----RSHLTAASSPPTADYLKAAVFLLLASLSWASFFVLQA 199

Query:   181 ITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGL 240
              TLK Y A LS++  +CF GT++    A +ME   +++  I +D  L+AS Y+GI+ S +
Sbjct:   200 ATLKKYSAHLSMSTMVCFMGTLQSLALAFVMEHNPSAL-NIGFDMNLLASAYAGIMSSSI 258

Query:   241 TYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLXXXXXXXXXXXXLYLVVW 300
              YY+QG++M+ +GPVFV AF+PL +VIV+IMS  +L + +YL            +Y V+W
Sbjct:   259 AYYVQGLMMQRKGPVFVTAFNPLIVVIVSIMSFFVLGQGIYLGGVIGVVVLMVGVYAVLW 318

Query:   301 GKSKDHKSPSPSTDEHLPPAEQTNNTGSNG 330
             GK  D        ++++   +  +  G+NG
Sbjct:   319 GKHVDDDGEETRHEDNVVAVKCCS--GNNG 346

GO:0005576 "extracellular region" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9ZUS1	WTR13_ARATH	No assigned EC number	0.6598	0.9825	0.8868	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00023132001 SubName- Full=Chromosome chr8 scaffold_29, whole genome shotgun sequence; (394 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	343
PLN00411	358	PLN00411, PLN00411, nodulin MtN21 family protein;	4e-47
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	7e-11
pfam00892	126	pfam00892, EamA, EamA-like transporter family	2e-08
pfam00892	126	pfam00892, EamA, EamA-like transporter family	7e-08
TIGR00950	260	TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Tran	8e-06
PRK11453	299	PRK11453, PRK11453, O-acetylserine/cysteine export	3e-04
TIGR03340	281	TIGR03340, phn_DUF6, phosphonate utilization assoc	4e-04

>gnl|CDD|177805 PLN00411, PLN00411, nodulin MtN21 family protein; Provisional

 Score =  162 bits (412), Expect = 4e-47
 Identities = 105/312 (33%), Positives = 178/312 (57%), Gaps = 9/312 (2%)

Query: 1   MDVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDK-KIRPKMTLAILTKLLLLGLL 59
           +  L K A +KG++ Y  + Y +  A++ + P     ++ +  P ++++IL+K+ LLG L
Sbjct: 28  ISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFL 87

Query: 60  EPVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLA 119
             +     Y IG++Y+  T A+A+ NI PA+TF++A I R+E V+ K   S+AKV+GT+ 
Sbjct: 88  GSMYVITGY-IGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTIL 146

Query: 120 TVAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNS---IKGALMITAGCF-SWSFF 175
           ++ GA+V+    GP + +  +    N    S   ++ NS   I GAL+   G F S SF 
Sbjct: 147 SLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSF- 205

Query: 176 IILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGI 235
            ILQA  +  YPA  +++       ++  ++  L++E+   S+W IH+D  L+  V   I
Sbjct: 206 -ILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITLITIVTMAI 264

Query: 236 ICSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGL 295
           I S + Y I    ++ +GP+++A F PL ++I  +M  I L + +YLG +IG I+I  G 
Sbjct: 265 ITS-VYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGF 323

Query: 296 YLVVWGKSKDHK 307
           Y V+WGK+ + K
Sbjct: 324 YAVMWGKANEEK 335

Length = 358

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 61.8 bits (150), Expect = 7e-11
 Identities = 63/304 (20%), Positives = 117/304 (38%), Gaps = 34/304 (11%)

Query: 1   MDVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLE 60
             +  K A+            R   A + + P  ++  +    +  L     LLLL LL 
Sbjct: 22  SFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLL--EPRGLRPALRPWLLLLLLALLG 79

Query: 61  PVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLAT 120
             +   L F+ +KYT+A+ A+ +  +LP  T L+A ++ L         SL +++G L  
Sbjct: 80  LALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLL-----GERLSLLQILGILLA 134

Query: 121 VAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIKGALMITAGCFSWSFFIILQA 180
           +AG +++ L                      G     S+ G L+  A    W+ +  L  
Sbjct: 135 LAGVLLILL--------------------GGGGGGILSLLGLLLALAAALLWALYTALVK 174

Query: 181 ITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGL 240
              +  P      A +         L    +    A I +  W    +  +Y G+  +GL
Sbjct: 175 RLSRLGPV---TLALLLQLLLALLLLLLFFLSGFGAPILSRAW----LLLLYLGVFSTGL 227

Query: 241 TYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVW 300
            Y +    ++  G   VA  S L  V  A++  ++L E +   +++GA +++ G+ L   
Sbjct: 228 AYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASL 287

Query: 301 GKSK 304
              +
Sbjct: 288 RARR 291

Length = 292

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 51.8 bits (125), Expect = 2e-08
 Identities = 32/127 (25%), Positives = 62/127 (48%), Gaps = 8/127 (6%)

Query: 3   VLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLEPV 62
           V  K  L + +SP     YR   A I +    + L +K    ++L  +  LL LGL    
Sbjct: 8   VFSKKLLER-ISPLTFTAYRFLIAGI-LLILLLFLLRKPFALLSLKAILALLYLGLFGTA 65

Query: 63  IDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVA 122
           +   LYF  +KY +A+ A+ + ++ P  T +++ ++  E + LK      +++G +  + 
Sbjct: 66  LGYLLYFYALKYVSASNASVITSLSPVFTLILSVLLLGEKLTLK------QLLGIVLILL 119

Query: 123 GAMVMTL 129
           G +++ L
Sbjct: 120 GVLLILL 126

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 50.3 bits (121), Expect = 7e-08
 Identities = 25/131 (19%), Positives = 61/131 (46%), Gaps = 5/131 (3%)

Query: 170 FSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVA 229
            SW+ + +     L+     L+ TA+      +   +  L + R   ++ ++     ++A
Sbjct: 1   LSWALYFVFSKKLLERISP-LTFTAYRFLIAGI-LLILLLFLLRKPFALLSLKA---ILA 55

Query: 230 SVYSGIICSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAI 289
            +Y G+  + L Y +    +K       +  + L  V   I+S ++L E++ L +++G +
Sbjct: 56  LLYLGLFGTALGYLLYFYALKYVSASNASVITSLSPVFTLILSVLLLGEKLTLKQLLGIV 115

Query: 290 IIIGGLYLVVW 300
           +I+ G+ L++ 
Sbjct: 116 LILLGVLLILL 126

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

>gnl|CDD|233205 TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Transporter

 Score = 46.1 bits (110), Expect = 8e-06
 Identities = 57/294 (19%), Positives = 111/294 (37%), Gaps = 41/294 (13%)

Query: 3   VLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLEPV 62
           V+    L   +  Y  V  R   A + + P        +R +  L  L +LLLLG L+  
Sbjct: 6   VVIGQYLEGQVPLYFAVFRRLIFALLLLLPL-------LRRRPPLKRLLRLLLLGALQIG 58

Query: 63  IDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVA 122
           +   LYF+ +K      AA +  + P    L++ ++  E            ++  +  +A
Sbjct: 59  VFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKL------VLLAAVLGLA 112

Query: 123 GAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIKGALMITAGCFSWSFFIIL-QAI 181
           GA++  L+    L +                       G L+      S++   +L + +
Sbjct: 113 GAVL--LLSDGNLSINP--------------------AGLLLGLGSGISFALGTVLYKRL 150

Query: 182 TLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGLT 241
             K  P  L  T W+   G +     A  +        ++ W     A +Y G+I + L 
Sbjct: 151 VKKEGPELLQFTGWVLLLGALLLLPFAWFLG-PNPQALSLQW----GALLYLGLIGTALA 205

Query: 242 YYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGL 295
           Y++    +    P   +  +    ++  ++  +IL E + L ++IG  +II  +
Sbjct: 206 YFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259

[Transport and binding proteins, Amino acids, peptides and amines]. Length = 260

>gnl|CDD|183142 PRK11453, PRK11453, O-acetylserine/cysteine export protein; Provisional

 Score = 41.7 bits (98), Expect = 3e-04
 Identities = 38/151 (25%), Positives = 77/151 (50%), Gaps = 6/151 (3%)

Query: 156 HNSIKGALMITAGCFSWSFFIIL--QAITLKAYPAELSLTAWICFFGTVEGTLAALIMER 213
           H ++ G ++  A  FSW+   I   + ++    PA +SL  W      +   +A+LI++ 
Sbjct: 139 HVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILD- 197

Query: 214 GKASIWA--IHWD-TKLVASVYSGIICSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAI 270
           G A++    +  D T +++ +Y   + + + Y I G ++       VA  S L  V+   
Sbjct: 198 GSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLA 257

Query: 271 MSTIILAEQMYLGRIIGAIIIIGGLYLVVWG 301
            + ++L E++   + +GA++I+ GLY+ V+G
Sbjct: 258 SAALLLDERLTGLQFLGAVLIMAGLYINVFG 288

Length = 299

>gnl|CDD|234171 TIGR03340, phn_DUF6, phosphonate utilization associated putative membrane protein

 Score = 41.3 bits (97), Expect = 4e-04
 Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 2/90 (2%)

Query: 206 LAALIMERGKASIWAIHWDTKLVASVYSGIICSGLTYYIQGIVMKDRGPVFVAAFSPLCM 265
              L ++R   S++         A++  G +  G  Y +    M       V A     +
Sbjct: 191 FLLLYLKRHGRSMFPYARQILPSATL--GGLMIGGAYALVLWAMTRLPVATVVALRNTSI 248

Query: 266 VIVAIMSTIILAEQMYLGRIIGAIIIIGGL 295
           V   ++    L E+ YL R++G  II+ GL
Sbjct: 249 VFAVVLGIWFLNERWYLTRLMGVCIIVAGL 278

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira. Length = 281

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	343
PLN00411	358	nodulin MtN21 family protein; Provisional	100.0
PRK11272	292	putative DMT superfamily transporter inner membran	100.0
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	100.0
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.98
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.97
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.97
PRK11689	295	aromatic amino acid exporter; Provisional	99.97
PRK15430	296	putative chloramphenical resistance permease RarD;	99.96
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.96
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.96
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.95
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.92
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.91
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.9
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.9
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.88
COG2962	293	RarD Predicted permeases [General function predict	99.86
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.84
KOG2765	416	consensus Predicted membrane protein [Function unk	99.84
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.81
KOG1580	337	consensus UDP-galactose transporter related protei	99.79
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.71
KOG1581	327	consensus UDP-galactose transporter related protei	99.71
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.68
KOG2766	336	consensus Predicted membrane protein [Function unk	99.66
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.63
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.59
COG2510	140	Predicted membrane protein [Function unknown]	99.59
COG2510	140	Predicted membrane protein [Function unknown]	99.48
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.48
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.47
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.42
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.39
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.39
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	99.35
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.32
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.29
KOG1582	367	consensus UDP-galactose transporter related protei	99.26
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	99.25
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.24
PRK15430	296	putative chloramphenical resistance permease RarD;	99.23
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.19
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.13
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	99.01
PLN00411	358	nodulin MtN21 family protein; Provisional	99.0
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	98.99
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.96
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.93
PRK11272	292	putative DMT superfamily transporter inner membran	98.89
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.89
PRK11689	295	aromatic amino acid exporter; Provisional	98.87
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.86
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.75
PRK13499	345	rhamnose-proton symporter; Provisional	98.74
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.74
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.69
COG2962	293	RarD Predicted permeases [General function predict	98.65
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.6
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.58
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.47
KOG2922	335	consensus Uncharacterized conserved protein [Funct	98.42
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	98.4
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.34
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.29
KOG4510	346	consensus Permease of the drug/metabolite transpor	98.27
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	98.16
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	98.14
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	98.14
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.1
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.98
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.95
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.93
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.82
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	97.76
COG2076	106	EmrE Membrane transporters of cations and cationic	97.71
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.69
PRK11431	105	multidrug efflux system protein; Provisional	97.65
PRK11431	105	multidrug efflux system protein; Provisional	97.64
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.64
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.63
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	97.63
COG2076	106	EmrE Membrane transporters of cations and cationic	97.61
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.58
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.49
PRK13499	345	rhamnose-proton symporter; Provisional	97.47
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.4
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	97.3
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	97.26
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	97.24
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.11
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.06
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	96.95
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	96.68
KOG2922	335	consensus Uncharacterized conserved protein [Funct	96.52
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	96.5
KOG2765	416	consensus Predicted membrane protein [Function unk	96.27
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.25
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	95.71
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	95.68
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	95.36
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	94.59
KOG1581	327	consensus UDP-galactose transporter related protei	94.58
KOG1443	349	consensus Predicted integral membrane protein [Fun	94.4
KOG1580	337	consensus UDP-galactose transporter related protei	94.01
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	93.74
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	93.66
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	93.56
PRK02237	109	hypothetical protein; Provisional	91.9
KOG2766	336	consensus Predicted membrane protein [Function unk	91.38
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	90.63
PRK02237	109	hypothetical protein; Provisional	90.33
KOG3912	372	consensus Predicted integral membrane protein [Gen	90.28
PF07168	336	Ureide_permease: Ureide permease; InterPro: IPR009	88.65
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	88.06
PF05297	381	Herpes_LMP1: Herpesvirus latent membrane protein 1	82.48
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	82.14
KOG4831	125	consensus Unnamed protein [Function unknown]	82.04
PF04342	108	DUF486: Protein of unknown function, DUF486; Inter	81.85
COG1742	109	Uncharacterized conserved protein [Function unknow	80.58
KOG4831	125	consensus Unnamed protein [Function unknown]	80.36

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=100.00  E-value=3.8e-37  Score=279.65  Aligned_cols=301  Identities=30%  Similarity=0.545  Sum_probs=233.4

Q ss_pred             CcchhhhhhhCCCChhHHHHHHHHHHHHHHHHHHHHhcc-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhH
Q 019311            1 MDVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDK-KIRPKMTLAILTKLLLLGLLEPVIDQNLYFIGMKYTTATF   79 (343)
Q Consensus         1 ~~~~~k~~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~   79 (343)
                      |+++.|.+++.+++|..++++|+.++.++++++.+.++| +++++.+++++..+.+.|+++ .+.+.+++.|++|+++++
T Consensus        28 ~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g-~~~~~~~~~gl~~tsa~~  106 (358)
T PLN00411         28 ISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLG-SMYVITGYIGIEYSNPTL  106 (358)
T ss_pred             HHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHH-HHHHHHHHHHHhhccHHH
Confidence            467899999999999999999999999999999877544 233444678889999999999 788889999999999999


Q ss_pred             HHHHhchhHHHHHHHHHHHh------hccccccccccchhhHHHHHHHhhhhhheeecCcccccc--cccCCCCCCCCCC
Q 019311           80 AAAMYNILPAITFLMAWIIR------LENVNLKSIRSLAKVIGTLATVAGAMVMTLIKGPILELF--WTKGAENHGHGSS  151 (343)
Q Consensus        80 ~~~i~~~~p~~~~lla~~~~------~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~~~~~~~~~~--~~~~~~~~~~~~~  151 (343)
                      ++++.++.|+++.+++++++      |||++++      |++|++++++|+.++...+++.....  ++.-+........
T Consensus       107 asll~~~~P~~~~lla~~~~~e~~~~~er~~~~------~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~  180 (358)
T PLN00411        107 ASAISNITPALTFILAIIFRMEKVSFKERSSVA------KVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPL  180 (358)
T ss_pred             HHHHHHhhHHHHHHHHHHHHhchhhhcccccHH------HHHHHHHHHHHHHHHHHccCccccccccccccccccccccc
Confidence            99999999999999999994      6666666      59999999999998875444211000  0000000000000


Q ss_pred             CCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHHccCCccceeecchhhHHHHH
Q 019311          152 GTTTHNSIKGALMITAGCFSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASV  231 (343)
Q Consensus       152 ~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  231 (343)
                      .....+...|++++++++++||+|.+.+|+..++++++...++++..++.+...+..+..+..+...|..........++
T Consensus       181 ~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~  260 (358)
T PLN00411        181 SSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITLITIV  260 (358)
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHHHHHH
Confidence            11223446799999999999999999999999988766677777777777776666665553122333222222445677


Q ss_pred             HHHHHHHHHHHHHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhccCccCCCCC
Q 019311          232 YSGIICSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWGKSKDHKSP  309 (343)
Q Consensus       232 ~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~~~~~~~~~  309 (343)
                      +.+++ +.++|.+|++++++.+|+++++..+++|+++++++++++||++++.+++|+++|++|+++..+.++||.+.+
T Consensus       261 y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~~~~~~~  337 (358)
T PLN00411        261 TMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKANEEKDQ  337 (358)
T ss_pred             HHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhhhhhhhc
Confidence            87775 678999999999999999999999999999999999999999999999999999999999988766654433

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=100.00  E-value=9.4e-31  Score=234.06  Aligned_cols=264  Identities=16%  Similarity=0.180  Sum_probs=217.9

Q ss_pred             cchhhhhhhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh-cccchhHH
Q 019311            2 DVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLEPVIDQNLYFIGM-KYTTATFA   80 (343)
Q Consensus         2 ~~~~k~~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al-~~~~~~~~   80 (343)
                      ++.+|..+ ++++|.+++++|+.++.++++++...+++  + ..+++++......|.++...++.+++.+. ++++++++
T Consensus        24 ~~~~K~~~-~~~~p~~~~~~R~~~a~l~ll~~~~~~~~--~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a   99 (292)
T PRK11272         24 YLVIRIGV-ESWPPLMMAGVRFLIAGILLLAFLLLRGH--P-LPTLRQWLNAALIGLLLLAVGNGMVTVAEHQNVPSGIA   99 (292)
T ss_pred             HHHHHHHh-ccCCHHHHHHHHHHHHHHHHHHHHHHhCC--C-CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHH
Confidence            46789884 57999999999999999999888654322  2 22467788888899887678888999999 99999999


Q ss_pred             HHHhchhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhheeecCcccccccccCCCCCCCCCCCCCccchhH
Q 019311           81 AAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIK  160 (343)
Q Consensus        81 ~~i~~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (343)
                      +++.++.|+++.+++++ +|||+++++      +++++++++|+.++... +                     +.+....
T Consensus       100 ~~l~~~~Pl~~~lla~~-~~e~~~~~~------~~~~~la~~Gv~ll~~~-~---------------------~~~~~~~  150 (292)
T PRK11272        100 AVVVATVPLFTLCFSRL-FGIRTRKLE------WLGIAIGLAGIVLLNSG-G---------------------NLSGNPW  150 (292)
T ss_pred             HHHHHHHHHHHHHHHHH-hcccCchhH------HHHHHHHHHhHHHHhcC-c---------------------ccccchH
Confidence            99999999999999985 699999997      99999999999988621 1                     1123357


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHHccCCccceeecchhhHHHHHHHHHHHHHH
Q 019311          161 GALMITAGCFSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGL  240 (343)
Q Consensus       161 G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  240 (343)
                      |++++++++++||.|.+..|+..++  ++.....+++..+.+.+.+.....+. ...  ...+...|..+++.+++++.+
T Consensus       151 G~l~~l~a~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~i~~l~i~~s~~  225 (292)
T PRK11272        151 GAILILIASASWAFGSVWSSRLPLP--VGMMAGAAEMLAAGVVLLIASLLSGE-RLT--ALPTLSGFLALGYLAVFGSII  225 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCC--cchHHHHHHHHHHHHHHHHHHHHcCC-ccc--ccCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999986543  23556677888887777776654332 111  112345788999999999999


Q ss_pred             HHHHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhccCc
Q 019311          241 TYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWGKS  303 (343)
Q Consensus       241 ~~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~~~  303 (343)
                      ++.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++++.|+++..+.++
T Consensus       226 ~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~  288 (292)
T PRK11272        226 AISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY  288 (292)
T ss_pred             HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999999999999999999876544

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=100.00  E-value=2.4e-30  Score=228.11  Aligned_cols=256  Identities=21%  Similarity=0.274  Sum_probs=216.1

Q ss_pred             CcchhhhhhhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHH
Q 019311            1 MDVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLEPVIDQNLYFIGMKYTTATFA   80 (343)
Q Consensus         1 ~~~~~k~~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~   80 (343)
                      +++.+|..++++.++.+..+.|+..+.+++.++...  +     .+++++.+++..|.++..+++.+++.|+++++++++
T Consensus         4 ~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~--~-----~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~   76 (260)
T TIGR00950         4 TGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRR--R-----PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEA   76 (260)
T ss_pred             hHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHh--c-----cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhh
Confidence            367889987777899999999999998888776543  2     235677788888888879999999999999999999


Q ss_pred             HHHhchhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhheeecCcccccccccCCCCCCCCCCCCCccchhH
Q 019311           81 AAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIK  160 (343)
Q Consensus        81 ~~i~~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (343)
                      +++.++.|+++.+++++++|||+++++      ++|+.++++|+.++.. ++                     +.+....
T Consensus        77 ~ii~~~~P~~~~~~~~l~~~e~~~~~~------~~gi~i~~~Gv~li~~-~~---------------------~~~~~~~  128 (260)
T TIGR00950        77 ALLLYLAPLYVTLLSDLMGKERPRKLV------LLAAVLGLAGAVLLLS-DG---------------------NLSINPA  128 (260)
T ss_pred             HHHHhhhHHHHHHHHHHHccCCCcHHH------HHHHHHHHHhHHhhcc-CC---------------------cccccHH
Confidence            999999999999999999999999997      9999999999999862 11                     1124468


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhCC-chhHHHHHHHHHHHHHHHHHHHHHccCCccceeecchhhHHHHHHHHHHHHH
Q 019311          161 GALMITAGCFSWSFFIILQAITLKAYP-AELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSG  239 (343)
Q Consensus       161 G~~~~l~a~~~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  239 (343)
                      |+.++++++++|+.+.+..|+..++.+ ++.....+++..+.+++.+.....+. . ...   +...+..+++.+++++.
T Consensus       129 G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~-~~~---~~~~~~~~~~~~~~~~~  203 (260)
T TIGR00950       129 GLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGP-N-PQA---LSLQWGALLYLGLIGTA  203 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCC-C-CCc---chHHHHHHHHHHHHHHH
Confidence            999999999999999999999887654 23455556788888888777765432 1 111   34467778999999899


Q ss_pred             HHHHHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhh
Q 019311          240 LTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLY  296 (343)
Q Consensus       240 ~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~  296 (343)
                      +++.+|++++++.++.+++.+.+++|+++.+++++++||+++..+++|+++++.|++
T Consensus       204 ~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~  260 (260)
T TIGR00950       204 LAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence            999999999999999999999999999999999999999999999999999999863

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.98  E-value=1.1e-30  Score=234.97  Aligned_cols=270  Identities=14%  Similarity=0.135  Sum_probs=213.4

Q ss_pred             cchhhhhhhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHH
Q 019311            2 DVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLEPVIDQNLYFIGMKYTTATFAA   81 (343)
Q Consensus         2 ~~~~k~~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~   81 (343)
                      .+.+|.++++..+|..++++|+.++.+.+.+. +..+.+++++.+++++.+++..|++. .+++.+.+.+++|+++++++
T Consensus        18 ~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~l~~~s~s~~~   95 (302)
T TIGR00817        18 NIYNKKLLNVFPYPYFKTLISLAVGSLYCLLS-WSSGLPKRLKISSALLKLLLPVAIVH-TIGHVTSNVSLSKVAVSFTH   95 (302)
T ss_pred             HHHHHHHHhhCChhHHHHHHHHHHHHHHHHHH-HHhCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHhccHHHHH
Confidence            45789997654669999999999988776554 22223334556789999999999997 89999999999999999999


Q ss_pred             HHhchhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhheeecCcccccccccCCCCCCCCCCCCCccchhHH
Q 019311           82 AMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIKG  161 (343)
Q Consensus        82 ~i~~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G  161 (343)
                      ++.++.|+++++++++++|||+++++      +++++++++|+.+..  .+                     +.+....|
T Consensus        96 li~~~~Pv~~~ll~~~~~~e~~~~~~------~~~l~l~~~Gv~l~~--~~---------------------~~~~~~~G  146 (302)
T TIGR00817        96 TIKAMEPFFSVVLSAFFLGQEFPSTL------WLSLLPIVGGVALAS--DT---------------------ELSFNWAG  146 (302)
T ss_pred             HHHhcchHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHhhhc--CC---------------------cccccHHH
Confidence            99999999999999999999999997      999999999998754  11                     11234579


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHh--hCCchhHHHHHHHHHHHHHHHHHHHHHccCCcc--ceee-----cchhhHHHHHH
Q 019311          162 ALMITAGCFSWSFFIILQAITLK--AYPAELSLTAWICFFGTVEGTLAALIMERGKAS--IWAI-----HWDTKLVASVY  232 (343)
Q Consensus       162 ~~~~l~a~~~~a~~~i~~k~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~l~~  232 (343)
                      ++++++++++|+.|.+..|+..+  +. ++.....++...+.+.++|.....+.....  .+..     .....+...+.
T Consensus       147 ~~~~l~a~~~~a~~~v~~k~~~~~~~~-~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (302)
T TIGR00817       147 FLSAMISNITFVSRNIFSKKAMTIKSL-DKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLV  225 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCCC-CcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHH
Confidence            99999999999999999999887  55 478999999999999999988765531110  0000     00001111222


Q ss_pred             HHHHHHHHHHHHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhccCc
Q 019311          233 SGIICSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWGKS  303 (343)
Q Consensus       233 ~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~~~  303 (343)
                      .+..+....+.+++.++++.++++.++..+++|+++++++++++||+++..+++|.+++++|++++.+.|+
T Consensus       226 ~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~  296 (302)
T TIGR00817       226 AAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKA  296 (302)
T ss_pred             HHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhc
Confidence            23322333334666899999999999999999999999999999999999999999999999999987554

specificities overlap.

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.97  E-value=6.9e-30  Score=229.27  Aligned_cols=266  Identities=21%  Similarity=0.292  Sum_probs=203.1

Q ss_pred             cchhhhhhhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cchhHH
Q 019311            2 DVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLEPVIDQNLYFIGMKY-TTATFA   80 (343)
Q Consensus         2 ~~~~k~~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~-~~~~~~   80 (343)
                      ++++|..+ ++++|..++++|+.++++.++++..   ++   +.+++   ..+..|++.....+.+++.++++ .+++.+
T Consensus        20 ~~~~k~~~-~~~~p~~~~~~R~~~a~~~l~~~~~---~~---~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a   89 (299)
T PRK11453         20 FVVIKVGL-HNMPPLMLAGLRFMLVAFPAIFFVA---RP---KVPLN---LLLGYGLTISFGQFAFLFCAINFGMPAGLA   89 (299)
T ss_pred             HHHHHHHH-hcCCHHHHHHHHHHHHHHHHHHHhc---CC---CCchH---HHHHHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence            56789884 5699999999999998776655431   21   11222   34455665545666778889998 588999


Q ss_pred             HHHhchhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhheeecCcccccccccCCCCCCCCCCCCCccchhH
Q 019311           81 AAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIK  160 (343)
Q Consensus        81 ~~i~~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (343)
                      +++.++.|+++.+++++++|||+++++      +++++++++|+.++...+.                    ...+....
T Consensus        90 ~~l~~~~pi~~~ll~~~~l~e~~~~~~------~~~~~l~~~Gv~ll~~~~~--------------------~~~~~~~~  143 (299)
T PRK11453         90 SLVLQAQAFFTIVLGAFTFGERLQGKQ------LAGIALAIFGVLVLIEDSL--------------------NGQHVAML  143 (299)
T ss_pred             HHHHHhHHHHHHHHHHHHhcCcCcHHH------HHHHHHHHHhHHHhccccC--------------------CCcchhHH
Confidence            999999999999999999999999997      9999999999998873211                    11122357


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhCCch--hHHHHHHHHHHHHHHHHHHHHHccCCc--cceeecchhhHHHHHHHHHH
Q 019311          161 GALMITAGCFSWSFFIILQAITLKAYPAE--LSLTAWICFFGTVEGTLAALIMERGKA--SIWAIHWDTKLVASVYSGII  236 (343)
Q Consensus       161 G~~~~l~a~~~~a~~~i~~k~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~  236 (343)
                      |++++++++++|+.|.+..|+..++.+++  .....+....+.+.........+.+..  ..+...+...|..+++++++
T Consensus       144 G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~  223 (299)
T PRK11453        144 GFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFV  223 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHH
Confidence            99999999999999999999987665432  233344444444333333333332110  11122244578899999999


Q ss_pred             HHHHHHHHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhccCc
Q 019311          237 CSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWGKS  303 (343)
Q Consensus       237 ~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~~~  303 (343)
                      ++.++|.+|++++++.++.+++.+.+++|+++.+++++++||++++.+++|++++++|+++..+.++
T Consensus       224 ~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~  290 (299)
T PRK11453        224 ATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR  290 (299)
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence            9999999999999999999999999999999999999999999999999999999999998876553

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.97  E-value=5.7e-29  Score=222.59  Aligned_cols=261  Identities=13%  Similarity=0.097  Sum_probs=204.5

Q ss_pred             cchhhhhhhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHH
Q 019311            2 DVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLEPVIDQNLYFIGMKYTTATFAA   81 (343)
Q Consensus         2 ~~~~k~~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~   81 (343)
                      +.++|.+++ +++|.+++++|+.++.++++++...  ++  ++.+++++...+..|.+. ...+.++++++++++++.++
T Consensus        28 ~~~~K~~~~-~~~~~~~~~~R~~~a~l~l~~~~~~--~~--~~~~~~~~~~~~~~g~~~-~~~~~~~~~al~~~~~~~a~  101 (293)
T PRK10532         28 ASLAKSLFP-LVGAPGVTALRLALGTLILIAIFKP--WR--LRFAKEQRLPLLFYGVSL-GGMNYLFYLSIQTVPLGIAV  101 (293)
T ss_pred             HHHHHHHHH-HcCHHHHHHHHHHHHHHHHHHHHhH--Hh--ccCCHHHHHHHHHHHHHH-HHHHHHHHHHHhcccHHHHH
Confidence            567899954 5999999999999999988776432  21  234577888888888876 88889999999999999999


Q ss_pred             HHhchhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhheeecCcccccccccCCCCCCCCCCCCCccchhHH
Q 019311           82 AMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIKG  161 (343)
Q Consensus        82 ~i~~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G  161 (343)
                      ++..+.|+++.+++.    |++.+        ..++.++++|+.++...+.                    ........|
T Consensus       102 ~l~~t~Pi~~~ll~~----~~~~~--------~~~~~i~~~Gv~li~~~~~--------------------~~~~~~~~G  149 (293)
T PRK10532        102 ALEFTGPLAVALFSS----RRPVD--------FVWVVLAVLGLWFLLPLGQ--------------------DVSHVDLTG  149 (293)
T ss_pred             HHHHHHHHHHHHHhc----CChHH--------HHHHHHHHHHHheeeecCC--------------------CcccCChHH
Confidence            999999999988763    44332        5567788999988762211                    011223579


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHHccCCccceeecchhhHHHHHHHHHHHHHHH
Q 019311          162 ALMITAGCFSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGLT  241 (343)
Q Consensus       162 ~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  241 (343)
                      ++++++++++|+.|.+..|+..++.+ +... .+....+.+++.+.....+.    .. ..+...+..++++|++++.++
T Consensus       150 ~ll~l~aa~~~a~~~v~~r~~~~~~~-~~~~-~~~~~~~~~~l~~~~~~~~~----~~-~~~~~~~~~~l~lgv~~t~~~  222 (293)
T PRK10532        150 AALALGAGACWAIYILSGQRAGAEHG-PATV-AIGSLIAALIFVPIGALQAG----EA-LWHWSILPLGLAVAILSTALP  222 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCC-chHH-HHHHHHHHHHHHHHHHHccC----cc-cCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999877654 5554 45556666666666553221    11 112234556789999999999


Q ss_pred             HHHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhccCccCCC
Q 019311          242 YYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWGKSKDHK  307 (343)
Q Consensus       242 ~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~~~~~~~  307 (343)
                      |.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|++++++|++...+..+||.|
T Consensus       223 ~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~~~~  288 (293)
T PRK10532        223 YSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRREPK  288 (293)
T ss_pred             HHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence            999999999999999999999999999999999999999999999999999999999876655433

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.97  E-value=4.1e-29  Score=223.71  Aligned_cols=266  Identities=12%  Similarity=0.107  Sum_probs=196.3

Q ss_pred             cchhhhhhhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc----cch
Q 019311            2 DVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLEPVIDQNLYFIGMKY----TTA   77 (343)
Q Consensus         2 ~~~~k~~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~----~~~   77 (343)
                      |+.+|.+ .++++|..++++|+.++.++++++.   .+++.+   ++ .++.+..+.+....++.+++.++++    +++
T Consensus        20 ~~~~k~~-~~~~~P~~~~~~R~~~a~l~l~~~~---~~~~~~---~~-~~~~~~~~~l~~~~~~~~~~~a~~~~~~~~~a   91 (295)
T PRK11689         20 VGLIRGV-SESLGPVGGAAMIYSVSGLLLLLTV---GFPRLR---QF-PKRYLLAGGLLFVSYEICLALSLGYANTRRQA   91 (295)
T ss_pred             HHHHHHH-HccCChHHHHHHHHHHHHHHHHHHc---cccccc---cc-cHHHHHHHhHHHHHHHHHHHHHHHHhhccccc
Confidence            5788998 5669999999999999999887653   121111   11 2223444555557788888888765    577


Q ss_pred             hHHHHHhchhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhheeecCcccccccccCCCCCCCCCCCCCccc
Q 019311           78 TFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHN  157 (343)
Q Consensus        78 ~~~~~i~~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (343)
                      ++++++.++.|+++.+++++++|||+++++      ++|++++++|+.++...+...     +..+.       ......
T Consensus        92 ~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~------~~g~~l~~~Gv~li~~~~~~~-----~~~~~-------~~~~~~  153 (295)
T PRK11689         92 IEVGMVNYLWPSLTILFAVLFNGQKANWLL------IPGLLLALAGVAWVLGGDNGL-----SLAEL-------INNIAS  153 (295)
T ss_pred             hHHHHHHHHhHHHHHHHHHHHhcCCccHHH------HHHHHHHHHhHhheecCCccc-----hhhhh-------hhcccc
Confidence            888999999999999999999999999997      999999999999987321100     00000       001112


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHHccCCccceeecchhhHHHHHHHHHHH
Q 019311          158 SIKGALMITAGCFSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIIC  237 (343)
Q Consensus       158 ~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  237 (343)
                      ...|++++++++++||.|.+..|+..++.+ +....   ...+.+.+.+.... +. +. ... .+...|..+++.++ +
T Consensus       154 ~~~G~~~~l~aa~~~A~~~v~~k~~~~~~~-~~~~~---~~~~~~~l~~~~~~-~~-~~-~~~-~~~~~~~~l~~~~~-~  224 (295)
T PRK11689        154 NPLSYGLAFIGAFIWAAYCNVTRKYARGKN-GITLF---FILTALALWIKYFL-SP-QP-AMV-FSLPAIIKLLLAAA-A  224 (295)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHhhccCCCC-chhHH---HHHHHHHHHHHHHH-hc-Cc-ccc-CCHHHHHHHHHHHH-H
Confidence            356999999999999999999999876654 45432   22233333333322 22 11 111 23346777777775 6


Q ss_pred             HHHHHHHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhccC
Q 019311          238 SGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWGK  302 (343)
Q Consensus       238 ~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~~  302 (343)
                      ++++|.+|++++++.++++++.+.+++|+++++++++++||++++.+++|+++|+.|+++..+.+
T Consensus       225 t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~  289 (295)
T PRK11689        225 MGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLAT  289 (295)
T ss_pred             HHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhH
Confidence            89999999999999999999999999999999999999999999999999999999998886544

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.96  E-value=7.1e-28  Score=215.81  Aligned_cols=259  Identities=12%  Similarity=0.063  Sum_probs=187.7

Q ss_pred             cchhhhhhhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCC--CC-CHHHHHHHHHHHHHHHHHHHHHHHHhhcccchh
Q 019311            2 DVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRP--KM-TLAILTKLLLLGLLEPVIDQNLYFIGMKYTTAT   78 (343)
Q Consensus         2 ~~~~k~~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~   78 (343)
                      ++..|.. . +++|.+++++|+.++.++++++...+++++..  +. +++++.. ...+.+....++.++++|+++++++
T Consensus        24 ~~~~k~~-~-~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~a~~~~~~~  100 (296)
T PRK15430         24 PAYFKLI-Y-YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFM-LAVSAVLIGGNWLLFIWAVNNHHML  100 (296)
T ss_pred             HHHHHHh-c-CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHH-HHHHHHHHHHHHHHHHHHHhcCchH
Confidence            4567876 3 59999999999999998887776543221110  01 2333333 3466666688999999999999999


Q ss_pred             HHHHHhchhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhheeecCcccccccccCCCCCCCCCCCCCccch
Q 019311           79 FAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNS  158 (343)
Q Consensus        79 ~~~~i~~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (343)
                      +++++.++.|+++.+++++++|||+++++      +++++++++|+.++...++                     +  . 
T Consensus       101 ~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~------~~g~~l~~~Gv~li~~~~~---------------------~--~-  150 (296)
T PRK15430        101 EASLGYFINPLVNIVLGMIFLGERFRRMQ------WLAVILAICGVLVQLWTFG---------------------S--L-  150 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCcHHH------HHHHHHHHHHHHHHHHHcC---------------------C--c-
Confidence            99999999999999999999999999998      9999999999999862111                     0  0 


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhCC-chhHHHHHHHHHHHHHHHHHHHHHccCCccceeecchhhHHHHHHHHHHH
Q 019311          159 IKGALMITAGCFSWSFFIILQAITLKAYP-AELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIIC  237 (343)
Q Consensus       159 ~~G~~~~l~a~~~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  237 (343)
                         ..++++++++||.|.+..|+..++.. +......+....+.+...+.   ... ....+...+...+..+...++ .
T Consensus       151 ---~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~g~-~  222 (296)
T PRK15430        151 ---PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI---ADS-STSHMGQNPMSLNLLLIAAGI-V  222 (296)
T ss_pred             ---cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH---ccC-CcccccCCcHHHHHHHHHHHH-H
Confidence               14688899999999998888643211 11222233333333222111   111 111111111112333344454 5


Q ss_pred             HHHHHHHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhcc
Q 019311          238 SGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWG  301 (343)
Q Consensus       238 ~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~  301 (343)
                      +.+++.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|++++++|+.+....
T Consensus       223 t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~  286 (296)
T PRK15430        223 TTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMD  286 (296)
T ss_pred             HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            8899999999999999999999999999999999999999999999999999999998777644

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.96  E-value=7.3e-27  Score=213.29  Aligned_cols=267  Identities=19%  Similarity=0.201  Sum_probs=209.5

Q ss_pred             cchhhhhhhCCCC-hhHHHHHHHHHHHHHHHHHHHHhccCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHhhcccchh
Q 019311            2 DVLCKAALNKGMS-PYVLVVYRHAAATIAMAPFAVILDKKIRPKM--TLAILTKLLLLGLLEPVIDQNLYFIGMKYTTAT   78 (343)
Q Consensus         2 ~~~~k~~~~~~~~-p~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~   78 (343)
                      ...+|.+++. ++ |+.++++|+.++.+++..+... +.+++++.  .+++++..+..|+++. ..+.+.+.|+++++++
T Consensus        65 ~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~llp~gl~~~-~~~~~~~~sl~~~svs  141 (350)
T PTZ00343         65 VVDNKLALNM-LPLPWTISSLQLFVGWLFALLYWAT-GFRKIPRIKSLKLFLKNFLPQGLCHL-FVHFGAVISMGLGAVS  141 (350)
T ss_pred             HHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHh-CCCCCCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHhhccHH
Confidence            3568999654 89 9999999999998776554322 22323334  2457888999999994 4466678999999999


Q ss_pred             HHHHHhchhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhheeecCcccccccccCCCCCCCCCCCCCccch
Q 019311           79 FAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNS  158 (343)
Q Consensus        79 ~~~~i~~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (343)
                      .++++.++.|+++++++++++|||+++++      +.+++++++|+++... +                      +.+..
T Consensus       142 ~~~iika~~Pvft~lls~~~l~ek~s~~~------~l~l~l~v~Gv~l~~~-~----------------------~~~~~  192 (350)
T PTZ00343        142 FTHVVKAAEPVFTALLSILFLKQFLNLYA------YLSLIPIVGGVALASV-K----------------------ELHFT  192 (350)
T ss_pred             HHHHHHHhhHHHHHHHHHHHhCCCccHHH------HHHHHHHHHHHHheec-c----------------------cchhH
Confidence            99999999999999999999999999997      9999999999999873 1                      12235


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhCC------chhHHHHHHHHHHHHHHHHHHHHHccCC-ccce----eecchhhH
Q 019311          159 IKGALMITAGCFSWSFFIILQAITLKAYP------AELSLTAWICFFGTVEGTLAALIMERGK-ASIW----AIHWDTKL  227 (343)
Q Consensus       159 ~~G~~~~l~a~~~~a~~~i~~k~~~~~~~------~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~----~~~~~~~~  227 (343)
                      ..|++++++++++|+.+++..|+..++.+      ++.....+....++++++|+....|... ...+    .......+
T Consensus       193 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~  272 (350)
T PTZ00343        193 WLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTK  272 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccch
Confidence            67999999999999999999999887542      2444556667888888888887555311 1111    00011122


Q ss_pred             HHHHHHHHHHHHHHHHHHHH----hhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhcc
Q 019311          228 VASVYSGIICSGLTYYIQGI----VMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWG  301 (343)
Q Consensus       228 ~~l~~~~~~~~~~~~~l~~~----a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~  301 (343)
                      ..+++. ++.+++++.+++.    +++++++.+.++..+++|+++++++++++||++++.+++|++++++|++++.+.
T Consensus       273 ~~~l~~-i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~  349 (350)
T PTZ00343        273 GIIIFK-IFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLF  349 (350)
T ss_pred             HHHHHH-HHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence            334443 4457888888885    999999999999999999999999999999999999999999999999998764

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.96  E-value=2.7e-26  Score=204.36  Aligned_cols=280  Identities=17%  Similarity=0.236  Sum_probs=221.3

Q ss_pred             hhhhhhCCCC-hhHHHHHHHHHHHHHHHHHHHHhccCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHH
Q 019311            5 CKAALNKGMS-PYVLVVYRHAAATIAMAPFAVILDKKI-RPKMTLAILTKLLLLGLLEPVIDQNLYFIGMKYTTATFAAA   82 (343)
Q Consensus         5 ~k~~~~~~~~-p~~~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~   82 (343)
                      +..+...+.+ |....++.+..-.++..+...++++++ ..+..+++|+++++.+++- ..++.+.+.|++|++.+.+++
T Consensus        32 s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~D-v~aN~~~v~a~~yTsvtS~~l  110 (334)
T PF06027_consen   32 SSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLD-VEANYLVVLAYQYTSVTSVQL  110 (334)
T ss_pred             HHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHH-HHHHHHHHHHhhcccHhHHHh
Confidence            3334344555 777778878777777766665543321 2223456788888899999 899999999999999999999


Q ss_pred             HhchhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhheeecCcccccccccCCCCCCCCCCCCCccchhHHH
Q 019311           83 MYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIKGA  162 (343)
Q Consensus        83 i~~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~  162 (343)
                      +..+..+++++++++++|+|+++.+      ++|++++++|+.++...+..              +++++.+..+..+|+
T Consensus       111 L~~~~i~~~~~LS~~fL~~ry~~~~------~~gv~i~i~Gv~lv~~sD~~--------------~~~~~~~~~~~i~GD  170 (334)
T PF06027_consen  111 LDCTSIPFVMILSFIFLKRRYSWFH------ILGVLICIAGVVLVVVSDVL--------------SGSDSSSGSNPILGD  170 (334)
T ss_pred             hhhhhhHHHHHHHHHHHHhhhhHHH------HHHHHHHHhhhhheeeeccc--------------ccccCCCCCccchhH
Confidence            9999999999999999999999997      99999999999998865532              111123445678999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHHccCCccceeecchhhHHHHHHHHHHHHHHHH
Q 019311          163 LMITAGCFSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGLTY  242 (343)
Q Consensus       163 ~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  242 (343)
                      +++++|+++||++++..++..++.+ ......+..+++.++..+...+.|..+.+..+...  ..........++.+.-|
T Consensus       171 ll~l~~a~lya~~nV~~E~~v~~~~-~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~--~~~~~~v~~~~~lf~~y  247 (334)
T PF06027_consen  171 LLALLGAILYAVSNVLEEKLVKKAP-RVEFLGMLGLFGFIISGIQLAILERSGIESIHWTS--QVIGLLVGYALCLFLFY  247 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCC-HHHHHHHHHHHHHHHHHHHHHheehhhhhccCCCh--hhHHHHHHHHHHHHHHH
Confidence            9999999999999999999999875 67788888889999988888877763333333222  22233333344567788


Q ss_pred             HHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhccCccCCCC
Q 019311          243 YIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWGKSKDHKS  308 (343)
Q Consensus       243 ~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~~~~~~~~  308 (343)
                      .+....+++.+|+...+-..+..+++++++++++|+++++..++|.++|++|.+++...+++++++
T Consensus       248 ~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~~~~  313 (334)
T PF06027_consen  248 SLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPEEEA  313 (334)
T ss_pred             HHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCccccc
Confidence            888899999999999999999999999999999999999999999999999999998766554433

Some of the sequences in this family are annotated as putative membrane proteins.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.95  E-value=1.3e-26  Score=206.27  Aligned_cols=260  Identities=15%  Similarity=0.153  Sum_probs=187.6

Q ss_pred             cchhhhhhhCCCChhHHHHHHHHHHHHHHHHHHHHhc-cCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHH
Q 019311            2 DVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILD-KKIRPKMTLAILTKLLLLGLLEPVIDQNLYFIGMKYTTATFA   80 (343)
Q Consensus         2 ~~~~k~~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~   80 (343)
                      ++++|....+ -++  ..+++...+.++++++...+. ++.++..+++ ++..++.+.++...++.+++.|+++.+++++
T Consensus        17 ~~~~k~~~~~-~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~   92 (281)
T TIGR03340        17 NLMAKSHADK-EPD--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPAT-FWLLLAISAVANMVYFLGLAQAYHHADVGLV   92 (281)
T ss_pred             HHHHhhcCCc-hhH--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchh-hHHHHHHHHHHHHHHHHHHHHHHhcCChhhh
Confidence            4567755333 344  347777777777777766532 2222322334 4444444555558999999999999999999


Q ss_pred             HHHhchhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhheeecCcccccccccCCCCCCCCCCCCCccchhH
Q 019311           81 AAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIK  160 (343)
Q Consensus        81 ~~i~~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (343)
                      +++.++.|+++.+++++++|||+++++      ++|+.++++|+.++...+.                      ......
T Consensus        93 ~~l~~~~p~~~~l~~~~~~~e~~~~~~------~~g~~~~~~Gv~ll~~~~~----------------------~~~~~~  144 (281)
T TIGR03340        93 YPLARSSPLLVAIWATLTLGETLSPLA------WLGILIITLGLLVLGLSRF----------------------AQHRRK  144 (281)
T ss_pred             hhHHhhhHHHHHHHHHHHHcCCCCHHH------HHHHHHHHHHHHHHhcccc----------------------cccchh
Confidence            999999999999999999999999998      9999999999998873211                      112246


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhCCchhH---HHHHHHHHHHHHHHHHHHHHccCCccceeecchhhHHHHHHHHHHH
Q 019311          161 GALMITAGCFSWSFFIILQAITLKAYPAELS---LTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIIC  237 (343)
Q Consensus       161 G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  237 (343)
                      |+.++++++++|+.|.+..|+..++.++...   ...+......+...+.....+. .  ... .....++.+++.+.++
T Consensus       145 g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~-~~~~~~~~~~~~~~~~  220 (281)
T TIGR03340       145 AYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHG-R--SMF-PYARQILPSATLGGLM  220 (281)
T ss_pred             HHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhc-c--chh-hhHHHHHHHHHHHHHH
Confidence            7889999999999999988876544332111   1222222221111111111111 1  111 1223456777888888


Q ss_pred             HHHHHHHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhh
Q 019311          238 SGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYL  297 (343)
Q Consensus       238 ~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l  297 (343)
                      +.++|.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|++++++|+.+
T Consensus       221 s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       221 IGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            999999999999999999999999999999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>TIGR00688 rarD rarD protein

Probab=99.92  E-value=3.7e-23  Score=181.72  Aligned_cols=232  Identities=12%  Similarity=0.070  Sum_probs=167.4

Q ss_pred             cchhhhhhhCCCChhHHHHHHHHHHHHHHHHHHHHhccCC-----CCCCCHHH-HHHHHHHHHHHHHHHHHHHHHhhccc
Q 019311            2 DVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKI-----RPKMTLAI-LTKLLLLGLLEPVIDQNLYFIGMKYT   75 (343)
Q Consensus         2 ~~~~k~~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~al~~~   75 (343)
                      +++.|.+ . +++|.+++++|+.++.++++++...+++++     .++.++++ +......|++. ..++.+++.|++++
T Consensus        18 ~~~~k~~-~-~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~a~~~~   94 (256)
T TIGR00688        18 YYYSKLL-K-PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLI-GFNWWLFIWAVNNG   94 (256)
T ss_pred             HHHHHHh-c-cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHH-HHHHHHHHHHHHcc
Confidence            4678874 4 599999999999999988877664433211     11122333 34456677765 89999999999999


Q ss_pred             chhHHHHHhchhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhheeecCcccccccccCCCCCCCCCCCCCc
Q 019311           76 TATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTT  155 (343)
Q Consensus        76 ~~~~~~~i~~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (343)
                      ++++++++.++.|+++++++++++|||+++++      +++++++++|+.++...++                     + 
T Consensus        95 ~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~------~l~~~~~~~Gv~li~~~~~---------------------~-  146 (256)
T TIGR00688        95 SSLEVSLGYLINPLVMVALGRVFLKERISRFQ------FIAVIIATLGVISNIVLKG---------------------S-  146 (256)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHcC---------------------C-
Confidence            99999999999999999999999999999997      9999999999998862111                     1 


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHHccCCccceeecchhhHHHHHHHHH
Q 019311          156 HNSIKGALMITAGCFSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGI  235 (343)
Q Consensus       156 ~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  235 (343)
                       ..    .++++++++|+.|.+..|+..++ + ....... .........+.....+. . ......+...|..+++.|+
T Consensus       147 -~~----~~~l~aa~~~a~~~i~~~~~~~~-~-~~~~~~~-~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~l~~~g~  216 (256)
T TIGR00688       147 -LP----WEALVLAFSFTAYGLIRKALKNT-D-LAGFCLE-TLSLMPVAIYYLLQTDF-A-TVQQTNPFPIWLLLVLAGL  216 (256)
T ss_pred             -ch----HHHHHHHHHHHHHHHHHhhcCCC-C-cchHHHH-HHHHHHHHHHHHHHhcc-C-cccccCchhHHHHHHHHHH
Confidence             11    35788999999999999886543 2 2222211 11122222212111111 1 1111112236777888887


Q ss_pred             HHHHHHHHHHHHhhccCCceeeeechhHHHHHHHHHHHHH
Q 019311          236 ICSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTII  275 (343)
Q Consensus       236 ~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~  275 (343)
                      + +.++|.++++++++.++++++++.+++|+++.+++.++
T Consensus       217 ~-t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       217 I-TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             H-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            6 88999999999999999999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.91  E-value=7.1e-22  Score=176.69  Aligned_cols=262  Identities=23%  Similarity=0.316  Sum_probs=196.2

Q ss_pred             hhhhhhhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHH
Q 019311            4 LCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLEPVIDQNLYFIGMKYTTATFAAAM   83 (343)
Q Consensus         4 ~~k~~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i   83 (343)
                      ..|.......++....+.|...+.+...+.... ++....+. .+.+.+..+.+.+.....+.+++.++++++++.++++
T Consensus        25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  102 (292)
T COG0697          25 ALKLAVESLDPFLFAAALRFLIAALLLLPLLLL-EPRGLRPA-LRPWLLLLLLALLGLALPFLLLFLALKYTSASVASLI  102 (292)
T ss_pred             HHHHHhcccCChHHHHHHHHHHHHHHHHHHHHh-hccccccc-ccchHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHH
Confidence            345552223667777777999888874333322 11111111 1224556666666669999999999999999999999


Q ss_pred             hchhHHHHHHHHH-HHhhccccccccccchhhHHHHHHHhhhhhheeecCcccccccccCCCCCCCCCCCCCccchhHHH
Q 019311           84 YNILPAITFLMAW-IIRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIKGA  162 (343)
Q Consensus        84 ~~~~p~~~~lla~-~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~  162 (343)
                      .++.|+++.++++ +++|||+++++      +.++.++++|+.++...++.                   .... ...|+
T Consensus       103 ~~~~p~~~~~~~~~~~~~e~~~~~~------~~~~~~~~~Gv~lv~~~~~~-------------------~~~~-~~~g~  156 (292)
T COG0697         103 IGLLPLFTALLAVLLLLGERLSLLQ------ILGILLALAGVLLILLGGGG-------------------GGIL-SLLGL  156 (292)
T ss_pred             HHHHHHHHHHHHHHHHccCCCcHHH------HHHHHHHHHhHHheecCCCc-------------------chhH-HHHHH
Confidence            9999999999997 66799999997      99999999999999843321                   1111 57899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCCchhHHHH-HHHHHHHHHHHHHHHHHccCCccceeecchhhHHHHHHHHHHHHHHH
Q 019311          163 LMITAGCFSWSFFIILQAITLKAYPAELSLTA-WICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGLT  241 (343)
Q Consensus       163 ~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  241 (343)
                      .++++++++|+.+.+..|+.. +.+ +..... +...  .............  . . .......+..+.+.++++++++
T Consensus       157 ~~~l~a~~~~a~~~~~~~~~~-~~~-~~~~~~~~~~~--~~~~~~~~~~~~~--~-~-~~~~~~~~~~~~~~g~~~~~i~  228 (292)
T COG0697         157 LLALAAALLWALYTALVKRLS-RLG-PVTLALLLQLL--LALLLLLLFFLSG--F-G-APILSRAWLLLLYLGVFSTGLA  228 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHhc-CCC-hHHHHHHHHHH--HHHHHHHHHHhcc--c-c-ccCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999887 443 344444 3333  1222222211111  1 1 1223347888889999888899


Q ss_pred             HHHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhcc
Q 019311          242 YYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWG  301 (343)
Q Consensus       242 ~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~  301 (343)
                      +.++++++++.++..++.+.+++|+++.++++++++|+++..+++|+++++.|+.+...+
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         229 YLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            999999999999999999999999999999999999999999999999999999998765

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.90  E-value=7.4e-22  Score=163.12  Aligned_cols=257  Identities=14%  Similarity=0.105  Sum_probs=207.3

Q ss_pred             hhhhhhhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHH
Q 019311            4 LCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLEPVIDQNLYFIGMKYTTATFAAAM   83 (343)
Q Consensus         4 ~~k~~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i   83 (343)
                      +.|.+.. .+.|.-.+.+|..+++++++++.    |+.+.+.++++++..+..|+.. ..-|.+||.+++..|.+.+..+
T Consensus        30 ~Ak~LFP-~vG~~g~t~lRl~~aaLIll~l~----RPwr~r~~~~~~~~~~~yGvsL-g~MNl~FY~si~riPlGiAVAi  103 (292)
T COG5006          30 FAKSLFP-LVGAAGVTALRLAIAALILLALF----RPWRRRLSKPQRLALLAYGVSL-GGMNLLFYLSIERIPLGIAVAI  103 (292)
T ss_pred             HHHHHcc-ccChhhHHHHHHHHHHHHHHHHh----hHHHhccChhhhHHHHHHHHHH-HHHHHHHHHHHHhccchhhhhh
Confidence            4566643 37899999999999999988765    3334567789999999999988 7888999999999999999999


Q ss_pred             hchhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhheeecCcccccccccCCCCCCCCCCCCCccchhHHHH
Q 019311           84 YNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIKGAL  163 (343)
Q Consensus        84 ~~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~  163 (343)
                      -++-|+..++++-   |+.   ++      .+.+.+++.|+.++.- .+                   ++....+..|..
T Consensus       104 EF~GPL~vA~~~s---Rr~---~d------~vwvaLAvlGi~lL~p-~~-------------------~~~~~lDp~Gv~  151 (292)
T COG5006         104 EFTGPLAVALLSS---RRL---RD------FVWVALAVLGIWLLLP-LG-------------------QSVWSLDPVGVA  151 (292)
T ss_pred             hhccHHHHHHHhc---cch---hh------HHHHHHHHHHHHhhee-cc-------------------CCcCcCCHHHHH
Confidence            9999999776643   222   22      5667788889888873 22                   123446679999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHHccCCccceeecchhhHHHHHHHHHHHHHHHHH
Q 019311          164 MITAGCFSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGLTYY  243 (343)
Q Consensus       164 ~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  243 (343)
                      +++.++.||+.|.+..||..+..+ ....+...+..++++.+|+......     .....+.-...-+..+++.+.+.|.
T Consensus       152 ~Al~AG~~Wa~YIv~G~r~g~~~~-g~~g~a~gm~vAaviv~Pig~~~ag-----~~l~~p~ll~laLgvavlSSalPYs  225 (292)
T COG5006         152 LALGAGACWALYIVLGQRAGRAEH-GTAGVAVGMLVAALIVLPIGAAQAG-----PALFSPSLLPLALGVAVLSSALPYS  225 (292)
T ss_pred             HHHHHhHHHHHHHHHcchhcccCC-CchHHHHHHHHHHHHHhhhhhhhcc-----hhhcChHHHHHHHHHHHHhcccchH
Confidence            999999999999999999886554 4566778889999999999874332     1122333455566778889999999


Q ss_pred             HHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhccCcc
Q 019311          244 IQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWGKSK  304 (343)
Q Consensus       244 l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~~~~  304 (343)
                      +...++++.+....+.++.+||.++.+.+++++||.+++.||.|++.++.+..-..+..+|
T Consensus       226 LEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~  286 (292)
T COG5006         226 LEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARK  286 (292)
T ss_pred             HHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCC
Confidence            9999999999999999999999999999999999999999999999999998766654443

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.90  E-value=8.1e-25  Score=181.70  Aligned_cols=276  Identities=15%  Similarity=0.145  Sum_probs=208.9

Q ss_pred             CcchhhhhhhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHH
Q 019311            1 MDVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLEPVIDQNLYFIGMKYTTATFA   80 (343)
Q Consensus         1 ~~~~~k~~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~   80 (343)
                      |++.+|.+   +.+|.+..-.|++..++...|...+.+....  -+..+..++++.|..+ ..+..+.|+|++|++.+++
T Consensus        53 ~vv~t~~~---e~~p~e~a~~r~l~~mlit~pcliy~~~~v~--gp~g~R~~LiLRg~mG-~tgvmlmyya~~~mslaDA  126 (346)
T KOG4510|consen   53 MVVSTKVL---ENDPMELASFRLLVRMLITYPCLIYYMQPVI--GPEGKRKWLILRGFMG-FTGVMLMYYALMYMSLADA  126 (346)
T ss_pred             HHhhhhhh---ccChhHhhhhhhhhehhhhheEEEEEeeeee--cCCCcEEEEEeehhhh-hhHHHHHHHHHhhcchhhe
Confidence            34555655   4789999999998888888877766444321  1234455778889988 7778889999999999999


Q ss_pred             HHHhchhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhheeecCcccccccccCCCCCCCCCCCCCccchhH
Q 019311           81 AAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIK  160 (343)
Q Consensus        81 ~~i~~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (343)
                      +++...+|+++.+++|+++|||.++.+      .++..+.+.|+++++-   |.+.+.+.....+      .+..+....
T Consensus       127 ~vItFssPvft~ifaw~~LkE~~t~~e------aL~s~itl~GVVLIvR---PpFlFG~~t~g~~------~s~~~~~~~  191 (346)
T KOG4510|consen  127 VVITFSSPVFTIIFAWAFLKEPFTKFE------ALGSLITLLGVVLIVR---PPFLFGDTTEGED------SSQVEYDIP  191 (346)
T ss_pred             EEEEecChHHHHHHHHHHHcCCCcHHH------HHHHHHhhheEEEEec---CCcccCCCccccc------cccccccCC
Confidence            999999999999999999999999998      9999999999999983   2222221111111      111344567


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHHccCCccceeecchhhHHHHHHHHHHHHHH
Q 019311          161 GALMITAGCFSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGL  240 (343)
Q Consensus       161 G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  240 (343)
                      |...++.+++.-|...++.|+..|+.+..+. ..+....+.+..+......+.   -.++. ...+|+..+.+|++ +++
T Consensus       192 gt~aai~s~lf~asvyIilR~iGk~~h~~ms-vsyf~~i~lV~s~I~~~~ig~---~~lP~-cgkdr~l~~~lGvf-gfi  265 (346)
T KOG4510|consen  192 GTVAAISSVLFGASVYIILRYIGKNAHAIMS-VSYFSLITLVVSLIGCASIGA---VQLPH-CGKDRWLFVNLGVF-GFI  265 (346)
T ss_pred             chHHHHHhHhhhhhHHHHHHHhhccccEEEE-ehHHHHHHHHHHHHHHhhccc---eecCc-cccceEEEEEehhh-hhH
Confidence            7888888888888888999998888764333 334344444444443332221   12222 23467777888986 899


Q ss_pred             HHHHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhccCc
Q 019311          241 TYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWGKS  303 (343)
Q Consensus       241 ~~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~~~  303 (343)
                      ++.+...++|+..+..+++..+.+.+++++++.++|+|.|+++.|.|+++++...+....+|.
T Consensus       266 gQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~kw  328 (346)
T KOG4510|consen  266 GQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKKW  328 (346)
T ss_pred             HHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999887765443

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.88  E-value=1.9e-20  Score=168.37  Aligned_cols=268  Identities=15%  Similarity=0.188  Sum_probs=211.7

Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhchhHHHHHH
Q 019311           14 SPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLEPVIDQNLYFIGMKYTTATFAAAMYNILPAITFL   93 (343)
Q Consensus        14 ~p~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~l   93 (343)
                      .|..+++..+....++..+.....++++.   ++..+..++..+++. .++..+.+.|++|.+.+...++.++.|+.+++
T Consensus        31 ~~~~lt~~q~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi  106 (303)
T PF08449_consen   31 FPLFLTFVQFAFNALFSFILLSLFKFPKS---RKIPLKKYAILSFLF-FLASVLSNAALKYISYPTQIVFKSSKPIPVMI  106 (303)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhccccCC---CcChHHHHHHHHHHH-HHHHHHHHHHHHhCChHHHHHHhhhHHHHHHH
Confidence            38899999998888887776655332222   334466667778887 88889999999999999999999999999999


Q ss_pred             HHHHHhhccccccccccchhhHHHHHHHhhhhhheeecCcccccccccCCCCCCCCCCCCCccchhHHHHHHHHHHHHHH
Q 019311           94 MAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIKGALMITAGCFSWS  173 (343)
Q Consensus        94 la~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a  173 (343)
                      ++.+++|+|.++++      +.++++..+|+.+....+...             ++.++........|+++.+++.++.|
T Consensus       107 ~~~l~~~k~y~~~~------~~~v~li~~Gv~~~~~~~~~~-------------~~~~~~~~~~~~~G~~ll~~sl~~~a  167 (303)
T PF08449_consen  107 LGVLILGKRYSRRQ------YLSVLLITIGVAIFTLSDSSS-------------SSSSNSSSFSSALGIILLLLSLLLDA  167 (303)
T ss_pred             HHHHhcCccccHHH------HHHHHHHHhhHheeeeccccc-------------ccccccccccchhHHHHHHHHHHHHH
Confidence            99999999999997      999999999999998655321             11111122223349999999999999


Q ss_pred             HHHHHHHHHHhhCC-chhHHHHHHHHHHHHHHHHHHHH--Hcc-CCccceeecchhhHHHHHHHHHHHHHHHHHHHHHhh
Q 019311          174 FFIILQAITLKAYP-AELSLTAWICFFGTVEGTLAALI--MER-GKASIWAIHWDTKLVASVYSGIICSGLTYYIQGIVM  249 (343)
Q Consensus       174 ~~~i~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~--~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~  249 (343)
                      .+.+.+++..++++ ++...+++....+.+...+....  .+. .+...+....+..+..++...+ ++.+++...+...
T Consensus       168 ~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~-~~~~g~~~i~~~~  246 (303)
T PF08449_consen  168 FTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSL-TGALGQFFIFYLI  246 (303)
T ss_pred             HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence            99999999998776 56888999999999888887776  222 0111111122334444445445 5788888888999


Q ss_pred             ccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhccCccC
Q 019311          250 KDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWGKSKD  305 (343)
Q Consensus       250 ~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~~~~~  305 (343)
                      ++.++...+++..++.+++++++.+++++++++.+|+|.++++.|..++.+.++|+
T Consensus       247 ~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~  302 (303)
T PF08449_consen  247 KKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK  302 (303)
T ss_pred             HhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence            99999999999999999999999999999999999999999999999999877654

; GO: 0055085 transmembrane transport

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.86  E-value=1.4e-19  Score=153.76  Aligned_cols=259  Identities=14%  Similarity=0.112  Sum_probs=204.4

Q ss_pred             hhhhhhhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCC---CCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHH
Q 019311            4 LCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRP---KMTLAILTKLLLLGLLEPVIDQNLYFIGMKYTTATFA   80 (343)
Q Consensus         4 ~~k~~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~   80 (343)
                      ..|.+  ++.++.++...|...+..+++.+....++++..   .-+++.+....+.+++. ..++..|.+|......-++
T Consensus        25 y~kll--~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li-~~nW~lfiWAvn~g~~lea  101 (293)
T COG2962          25 YFKLL--EPLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLI-GLNWWLFIWAVNNGHVLEA  101 (293)
T ss_pred             HHHHH--ccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHH-HHHHHHhheecCCCchhHH
Confidence            34555  469999999999999999988877765443311   11356677777777777 9999999999999999999


Q ss_pred             HHHhchhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhheeecCcccccccccCCCCCCCCCCCCCccchhH
Q 019311           81 AAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIK  160 (343)
Q Consensus        81 ~~i~~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (343)
                      +.=+++.|++.++++++++|||+++.|      +++++++.+||....+..|.                       -.  
T Consensus       102 SLGY~InPL~~VllG~lflkErls~~Q------~iAV~lA~~GV~~~~~~~g~-----------------------lp--  150 (293)
T COG2962         102 SLGYFINPLVNVLLGRLFLKERLSRLQ------WIAVGLAAAGVLIQTWLLGS-----------------------LP--  150 (293)
T ss_pred             HhHHHHHHHHHHHHHHHHHHhhccHHH------HHHHHHHHHHHHHHHHHcCC-----------------------Cc--
Confidence            999999999999999999999999998      99999999999999865441                       11  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHHccCCccceeecchhhHHHHHHHHHHHHHH
Q 019311          161 GALMITAGCFSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGL  240 (343)
Q Consensus       161 G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  240 (343)
                        ..++.=++.|+.|... ||..+ .+ +.+-...-...-.+..+.+.+..+. ..+.....+...+..++..|.+ +++
T Consensus       151 --wval~la~sf~~Ygl~-RK~~~-v~-a~~g~~lE~l~l~p~al~yl~~l~~-~~~~~~~~~~~~~~LLv~aG~v-Tav  223 (293)
T COG2962         151 --WVALALALSFGLYGLL-RKKLK-VD-ALTGLTLETLLLLPVALIYLLFLAD-SGQFLQQNANSLWLLLVLAGLV-TAV  223 (293)
T ss_pred             --HHHHHHHHHHHHHHHH-HHhcC-Cc-hHHhHHHHHHHHhHHHHHHHHHHhc-CchhhhcCCchHHHHHHHhhHH-HHH
Confidence              2445557899999875 44344 23 4555556666666666666655554 2221222344466777777775 999


Q ss_pred             HHHHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhccCc
Q 019311          241 TYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWGKS  303 (343)
Q Consensus       241 ~~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~~~  303 (343)
                      +..++..+.++++-+..+.++|.+|..-.+++.+++||+++..+++..++|.+|..++....-
T Consensus       224 pL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l  286 (293)
T COG2962         224 PLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGL  286 (293)
T ss_pred             HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999999986543

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.84  E-value=1.1e-18  Score=155.61  Aligned_cols=257  Identities=14%  Similarity=0.127  Sum_probs=188.4

Q ss_pred             chhhhhhhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHH
Q 019311            3 VLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLEPVIDQNLYFIGMKYTTATFAAA   82 (343)
Q Consensus         3 ~~~k~~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~   82 (343)
                      +..|.. . +.++.++.  |..++.+++..+....+.+  ++..++.+...++.|++- ..++.+++.+.++++.+.+..
T Consensus        18 ~~~k~~-~-g~~~~~~~--~~~~g~l~~~~~~~~~~~~--~~~~~~~~~~g~l~G~~w-~ig~~~~~~ai~~~gva~a~~   90 (290)
T TIGR00776        18 LINVKI-G-GGPYSQTL--GTTFGALILSIAIAIFVLP--EFWALSIFLVGLLSGAFW-ALGQINQFKSMRYMGVSKTMP   90 (290)
T ss_pred             HHHhcc-C-CCHHHHHH--HHHHHHHHHHHHHHHHhCC--cccccHHHHHHHHHHHHH-HhhhhhHHHHHHHHhHHHHhH
Confidence            456666 3 67877775  7777777776665543321  122245455566666664 889999999999999999999


Q ss_pred             Hhc-hhHHHHHHHHHHHhhccccccccccchh----hHHHHHHHhhhhhheeecCcccccccccCCCCCCCCCCCCCccc
Q 019311           83 MYN-ILPAITFLMAWIIRLENVNLKSIRSLAK----VIGTLATVAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHN  157 (343)
Q Consensus        83 i~~-~~p~~~~lla~~~~~e~~~~~~~~~~~k----~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (343)
                      +.+ +.+++..+.+.+++||+.+++      |    ++|++++++|+.++...+++.          .     ++.+..+
T Consensus        91 i~~~~~~v~~~l~~~~~f~e~~t~~------~~~~~~~g~~l~l~G~~l~~~~~~~~----------~-----~~~~~~~  149 (290)
T TIGR00776        91 ISTGFQLVGGTLFGVIVFGEWSTSI------QTLLGLLALILIIIGVYLTSRSKDKS----------A-----GIKSEFN  149 (290)
T ss_pred             HHHHHHHHHHHHHHHHHhhhccchH------HHHHHHHHHHHHHHhHheEEeccccc----------c-----ccccccc
Confidence            997 999999999999999999877      6    888999999988886432210          0     0000023


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHH----HHHHHHHHHHHHHccCCccceeecchhhHHHHHHH
Q 019311          158 SIKGALMITAGCFSWSFFIILQAITLKAYPAELSLTAWICF----FGTVEGTLAALIMERGKASIWAIHWDTKLVASVYS  233 (343)
Q Consensus       158 ~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  233 (343)
                      ..+|..++++++++|+.|.+..|+. + + +|....+.+..    .+.++..+. .   . . ..+  .+. ..+.....
T Consensus       150 ~~~Gi~~~l~sg~~y~~~~~~~~~~-~-~-~~~~~~~~~~~g~~~~~~~~~~~~-~---~-~-~~~--~~~-~~~~~~~~  217 (290)
T TIGR00776       150 FKKGILLLLMSTIGYLVYVVVAKAF-G-V-DGLSVLLPQAIGMVIGGIIFNLGH-I---L-A-KPL--KKY-AILLNILP  217 (290)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHc-C-C-CcceehhHHHHHHHHHHHHHHHHH-h---c-c-cch--HHH-HHHHHHHH
Confidence            3679999999999999999999875 2 4 36666444444    333322222 0   1 1 111  122 33334448


Q ss_pred             HHHHHHHHHHHHHHhhc-cCCceeeeechhHHHHHHHHHHHHHhccccchhhH----HHHHHHHHhhhhhhc
Q 019311          234 GIICSGLTYYIQGIVMK-DRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRI----IGAIIIIGGLYLVVW  300 (343)
Q Consensus       234 ~~~~~~~~~~l~~~a~~-~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~----iG~~li~~G~~l~~~  300 (343)
                      |++ ..+++.+|..+.+ +.+++..+.+.+.+|+.+.+++++++||+.++.++    +|+++++.|+.+...
T Consensus       218 Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       218 GLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             HHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence            887 7999999999999 99999999999999999999999999999999999    999999999988754

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.84  E-value=1.2e-19  Score=158.15  Aligned_cols=229  Identities=14%  Similarity=0.203  Sum_probs=187.2

Q ss_pred             HHHHHHHHHHHHHHHHHhhcccchhHHHHHhchhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhheeecCc
Q 019311           54 LLLGLLEPVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIKGP  133 (343)
Q Consensus        54 ~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~~~~~  133 (343)
                      +....+= .+++..++.|+.+++++..+++.+++-+|+.+++.++.+||+++.      |.+++.+++.|++++...+.+
T Consensus       163 l~fc~lW-F~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~s------Kllav~~si~GViiVt~~~s~  235 (416)
T KOG2765|consen  163 LFFCPLW-FLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLS------KLLAVFVSIAGVIIVTMGDSK  235 (416)
T ss_pred             HHHHHHH-HHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHH------HHHHHHHhhccEEEEEecccc
Confidence            3444443 888999999999999999999999999999999999999999999      599999999999999865431


Q ss_pred             ccccccccCCCCCCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCC---chhHHHHHHHHHHHHHHHHHHHH
Q 019311          134 ILELFWTKGAENHGHGSSGTTTHNSIKGALMITAGCFSWSFFIILQAITLKAYP---AELSLTAWICFFGTVEGTLAALI  210 (343)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~  210 (343)
                                     +.++..+.....|+++++++++.||.|.++.|+...+.+   |--.+..+..++..+++.|..++
T Consensus       236 ---------------~~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~i  300 (416)
T KOG2765|consen  236 ---------------QNSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLII  300 (416)
T ss_pred             ---------------ccccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHH
Confidence                           122334456689999999999999999999999877663   21222334445556666666655


Q ss_pred             HccCCccceeecchhhHHHHHHHHHHHHHHHHHHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHH
Q 019311          211 MERGKASIWAIHWDTKLVASVYSGIICSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAII  290 (343)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~l  290 (343)
                      .+....+.++.++......++..+++.++++-++|.+|.-.+++..+++-+.++.+.+++.+.++-+.++++.+++|.+.
T Consensus       301 L~~~~~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~  380 (416)
T KOG2765|consen  301 LDFFGEERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIP  380 (416)
T ss_pred             HHHhccCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHH
Confidence            54434455666666667778888899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhhhhccCcc
Q 019311          291 IIGGLYLVVWGKSK  304 (343)
Q Consensus       291 i~~G~~l~~~~~~~  304 (343)
                      |++|.++.++....
T Consensus       381 Ifv~Fv~vn~~~~~  394 (416)
T KOG2765|consen  381 IFVGFVIVNISSEN  394 (416)
T ss_pred             HHHHHhheeccccc
Confidence            99999998875543

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.81  E-value=1.6e-19  Score=158.95  Aligned_cols=274  Identities=17%  Similarity=0.207  Sum_probs=220.2

Q ss_pred             cchhhhhhhC-CCC-hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhH
Q 019311            2 DVLCKAALNK-GMS-PYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLEPVIDQNLYFIGMKYTTATF   79 (343)
Q Consensus         2 ~~~~k~~~~~-~~~-p~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~   79 (343)
                      ...+|..++. +.+ |..++.++...+.+..+.....+..+..+..++..+...+..|++. .++..+-+.++.+.+++.
T Consensus        33 ~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~-~~~~v~~n~Sl~~v~VsF  111 (316)
T KOG1441|consen   33 IILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVF-CISHVLGNVSLSYVPVSF  111 (316)
T ss_pred             EEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHH-HHHHHhcchhhhccchhH
Confidence            3567888762 444 9999999887777777666555444333333556788889999998 899999999999999999


Q ss_pred             HHHHhchhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhheeecCcccccccccCCCCCCCCCCCCCccchh
Q 019311           80 AAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSI  159 (343)
Q Consensus        80 ~~~i~~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (343)
                      ++.+..++|++++++++++.+|+.+...      +..+.....|+.+...                       ++.+.+.
T Consensus       112 ~q~iKa~~P~~tvl~~~~~~~~~~s~~~------~lsL~piv~GV~ias~-----------------------~e~~fn~  162 (316)
T KOG1441|consen  112 YQTIKALMPPFTVLLSVLLLGKTYSSMT------YLSLLPIVFGVAIASV-----------------------TELSFNL  162 (316)
T ss_pred             HHHHHhhcchhHHHHHHHHhCCCCcceE------EEEEEEeeeeEEEeee-----------------------ccccccH
Confidence            9999999999999999999999999998      9999999999999884                       2344678


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhh--CC-chhHHHHHHHHHHHHHHH-HHHHHHccCCccc-eee-cchhhHHHHHHH
Q 019311          160 KGALMITAGCFSWSFFIILQAITLKA--YP-AELSLTAWICFFGTVEGT-LAALIMERGKASI-WAI-HWDTKLVASVYS  233 (343)
Q Consensus       160 ~G~~~~l~a~~~~a~~~i~~k~~~~~--~~-~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~-~~~-~~~~~~~~l~~~  233 (343)
                      .|.+.++++.+..+..+++.|+..++  .+ +++++..++...+.+.++ |.....++ +... +.. .........++.
T Consensus       163 ~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  241 (316)
T KOG1441|consen  163 FGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEG-NKFVGFLTAPWFVTFLILLLN  241 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcc-cceeeeeccccchhhHHHHHH
Confidence            99999999999999999999999852  22 679999999999999888 87776665 2220 011 111123333344


Q ss_pred             HHHHHHHHHHHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhccCccCCC
Q 019311          234 GIICSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWGKSKDHK  307 (343)
Q Consensus       234 ~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~~~~~~~  307 (343)
                      . ++...-+...+..+.+++|.+.++.....-++.++.++++|+++.++.+..|+++.++|+.++.+.+.++++
T Consensus       242 s-v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~  314 (316)
T KOG1441|consen  242 S-VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKK  314 (316)
T ss_pred             H-HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhc
Confidence            4 346666777888999999999999999999999999999999999999999999999999999987776554

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.79  E-value=1.8e-17  Score=135.74  Aligned_cols=264  Identities=11%  Similarity=0.093  Sum_probs=202.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhchhHHHHHHH
Q 019311           15 PYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLEPVIDQNLYFIGMKYTTATFAAAMYNILPAITFLM   94 (343)
Q Consensus        15 p~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll   94 (343)
                      ...+++.....-.++.-++..++++.   +.+...-+.+..+++.. .+++...+.|++|+|-....+-.++.|+-++++
T Consensus        53 alaLVf~qC~~N~vfAkvl~~ir~~~---~~D~t~~~~YaAcs~sY-LlAMVssN~Alq~vpYPTqVlgKScKPIPVMil  128 (337)
T KOG1580|consen   53 ALALVFFQCTANTVFAKVLFLIRKKT---EIDNTPTKMYAACSASY-LLAMVSSNQALQYVPYPTQVLGKSCKPIPVMIL  128 (337)
T ss_pred             HHHHHHHHHHHHHHHHHhheeecccc---cccCCcchHHHHHHHHH-HHHHHhccchhcccCCcHHHhcccCCCcceeee
Confidence            34455555555555443333332221   12222223345555544 888899999999999999999999999999999


Q ss_pred             HHHHhhccccccccccchhhHHHHHHHhhhhhheeecCcccccccccCCCCCCCCCCCCCccchhHHHHHHHHHHHHHHH
Q 019311           95 AWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIKGALMITAGCFSWSF  174 (343)
Q Consensus        95 a~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~  174 (343)
                      +.++.+++.+++.      +.+++++++|+++....+++.                ++........|.++.+++-..-+.
T Consensus       129 GVl~~~KsY~w~k------Y~cVL~IV~GValFmYK~~Kv----------------~g~e~~t~g~GElLL~lSL~mDGl  186 (337)
T KOG1580|consen  129 GVLFAHKSYHWRK------YCCVLMIVVGVALFMYKENKV----------------GGAEDKTFGFGELLLILSLAMDGL  186 (337)
T ss_pred             ehhhhcccccHHH------HHHHHHHHHHHHHhhcccccc----------------CCCcccccchHHHHHHHHHHhccc
Confidence            9999999999995      999999999999998543321                234556778999999999999999


Q ss_pred             HHHHHHHHHhhCC-chhHHHHHHHHHHHHHHHHHHHHHcc-CCccceeecchhhHHHHHHHHHHHHHHHHHHHHHhhccC
Q 019311          175 FIILQAITLKAYP-AELSLTAWICFFGTVEGTLAALIMER-GKASIWAIHWDTKLVASVYSGIICSGLTYYIQGIVMKDR  252 (343)
Q Consensus       175 ~~i~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~  252 (343)
                      ....+.+..+.+. ....++++.++.+.+.+..-.++.+. ++...+....+..|+.+..+++ ++++++++.+.-+.+.
T Consensus       187 Tg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai-~s~LGQ~fIF~tv~~F  265 (337)
T KOG1580|consen  187 TGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAI-ASCLGQWFIFKTVEEF  265 (337)
T ss_pred             chhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHH-HHHhhhHHHHHHHHHh
Confidence            9999888776654 34678888889888877766655432 1222223334556778888888 5999999999999999


Q ss_pred             CceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhccCccC
Q 019311          253 GPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWGKSKD  305 (343)
Q Consensus       253 ~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~~~~~  305 (343)
                      +|...+++......|+++.+.++++++++.+||+|..+++.|...-....++.
T Consensus       266 gPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~GK~a  318 (337)
T KOG1580|consen  266 GPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDGKKA  318 (337)
T ss_pred             CCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcCCcC
Confidence            99999999999999999999999999999999999999999988877655443

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.71  E-value=2e-15  Score=128.59  Aligned_cols=257  Identities=15%  Similarity=0.174  Sum_probs=196.8

Q ss_pred             CCCC-hhHHHHHHHHHHHHHHHHHHHHhccCCCC---CCCHHHHH-HHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhc
Q 019311           11 KGMS-PYVLVVYRHAAATIAMAPFAVILDKKIRP---KMTLAILT-KLLLLGLLEPVIDQNLYFIGMKYTTATFAAAMYN   85 (343)
Q Consensus        11 ~~~~-p~~~~~~r~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~   85 (343)
                      ++++ |+.++.+++.+-.++........+++.++   +.+|++.+ ++...|+.. ++.-.+.+++++|++.+.+++..+
T Consensus        40 ~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalat-a~DIGLSN~sl~yVtlSlYTM~KS  118 (349)
T KOG1443|consen   40 KNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALAT-ALDIGLSNWSLEYVTLSLYTMTKS  118 (349)
T ss_pred             cCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhh-hcccccccceeeeeeeeeeeeccc
Confidence            3455 88888888877777666555544433322   45677655 556667776 999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhheeecCcccccccccCCCCCCCCCCCCCccchhHHHHHH
Q 019311           86 ILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIKGALMI  165 (343)
Q Consensus        86 ~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~  165 (343)
                      ..++|+.+++.++.-||.++.-      ..-++++.+|+.+.+..                       ..+....|..+.
T Consensus       119 Ssi~FIllFs~if~lEk~~w~L------~l~v~lI~~Glflft~K-----------------------sTqf~i~Gf~lv  169 (349)
T KOG1443|consen  119 SSILFILLFSLIFKLEKFRWAL------VLIVLLIAVGLFLFTYK-----------------------STQFNIEGFFLV  169 (349)
T ss_pred             cHHHHHHHHHHHHHhHHHHHHH------HHHHHHHhhheeEEEec-----------------------ccceeehhHHHH
Confidence            9999999999999999999985      66667777777777742                       223567899999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCC----chhHHHHHHHHHHHHHHHHHHHHHccCCcc----ceeecch-hhHHHHHHHHHH
Q 019311          166 TAGCFSWSFFIILQAITLKAYP----AELSLTAWICFFGTVEGTLAALIMERGKAS----IWAIHWD-TKLVASVYSGII  236 (343)
Q Consensus       166 l~a~~~~a~~~i~~k~~~~~~~----~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~----~~~~~~~-~~~~~l~~~~~~  236 (343)
                      .+++++-++-+...+..+++.+    +|....+.......+.++|..+..|+....    .+...+. ..+..+..+++ 
T Consensus       170 ~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l-  248 (349)
T KOG1443|consen  170 LAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISL-  248 (349)
T ss_pred             HHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHH-
Confidence            9999999999999998888765    688888888888888999999988873221    1211121 12222222222 


Q ss_pred             HHHHHH---HHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhh
Q 019311          237 CSGLTY---YIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLV  298 (343)
Q Consensus       237 ~~~~~~---~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~  298 (343)
                      ++..++   ...+.-+.+++....++.....-+.+.+++.++.+|.++...|.|..+...|+.+.
T Consensus       249 ~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~  313 (349)
T KOG1443|consen  249 GGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH  313 (349)
T ss_pred             HHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence            233333   33455688899999999999999999999999999999999999999999999988

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.71  E-value=1.5e-15  Score=129.36  Aligned_cols=265  Identities=14%  Similarity=0.160  Sum_probs=212.7

Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhchhHHHHHH
Q 019311           14 SPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLEPVIDQNLYFIGMKYTTATFAAAMYNILPAITFL   93 (343)
Q Consensus        14 ~p~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~l   93 (343)
                      +|..+.+.+-+.+.++-.....+++++   ...++.|+.+...++.+ .++..|-+.|++|++-....+..++--+-+++
T Consensus        50 ~~~fL~~~q~l~~~~~s~~~l~~~k~~---~~~~apl~~y~~is~tn-~~s~~~~yeaLKyvSyPtq~LaKscKmIPVml  125 (327)
T KOG1581|consen   50 HSLFLVFCQRLVALLVSYAMLKWWKKE---LSGVAPLYKYSLISFTN-TLSSWCGYEALKYVSYPTQTLAKSCKMIPVML  125 (327)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhccccc---CCCCCchhHHhHHHHHh-hcchHHHHHHHHhccchHHHHHHHhhhhHHHH
Confidence            577778887777777765444332222   22345577888888888 88999999999999999999999999999999


Q ss_pred             HHHHHhhccccccccccchhhHHHHHHHhhhhhheeecCcccccccccCCCCCCCCCCCCCccchhHHHHHHHHHHHHHH
Q 019311           94 MAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIKGALMITAGCFSWS  173 (343)
Q Consensus        94 la~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a  173 (343)
                      ++.++.|.|.+..+      ++...+.-.|+.+....+..              ++++....++..+|..+....-++-+
T Consensus       126 mg~Lvy~~ky~~~e------Yl~~~LIs~GvsiF~l~~~s--------------~s~~~~g~~ns~~G~~Ll~~~L~fDg  185 (327)
T KOG1581|consen  126 MGTLVYGRKYSSFE------YLVAFLISLGVSIFSLFPNS--------------DSSSKSGRENSPIGILLLFGYLLFDG  185 (327)
T ss_pred             HHHHHhcCccCcHH------HHHHHHHHhheeeEEEecCC--------------CCccccCCCCchHhHHHHHHHHHHHh
Confidence            99999999999996      99999999999888865431              12334556688899999999999999


Q ss_pred             HHHHHHHHHHhhCC-chhHHHHHHHHHHHHHHHHHHHHHccCCcc--ceeecchhhHHHHHHHHHHHHHHHHHHHHHhhc
Q 019311          174 FFIILQAITLKAYP-AELSLTAWICFFGTVEGTLAALIMERGKAS--IWAIHWDTKLVASVYSGIICSGLTYYIQGIVMK  250 (343)
Q Consensus       174 ~~~i~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~  250 (343)
                      +.+..+.++.+++. ++..+++..++++++.........+. ...  .+-...+..+.-++.... ++.+++.+.++-++
T Consensus       186 fTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~-~~~av~F~~~hp~~~~Di~l~s~-~gavGQ~FI~~TI~  263 (327)
T KOG1581|consen  186 FTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGH-LLPAVSFIKEHPDVAFDILLYST-CGAVGQLFIFYTIE  263 (327)
T ss_pred             hHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCC-CchHHHHHHcChhHHHHHHHHHH-hhhhhhheehhhHh
Confidence            99999999988765 57899999999999888777432222 111  111123345666666676 58999999999999


Q ss_pred             cCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhccCcc
Q 019311          251 DRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWGKSK  304 (343)
Q Consensus       251 ~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~~~~  304 (343)
                      +.++.+.+.++.++-+++.+++.+.+++++++.||+|..+++.|+.+-.+-+++
T Consensus       264 ~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~  317 (327)
T KOG1581|consen  264 RFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK  317 (327)
T ss_pred             hcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999999988876665

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.68  E-value=7e-15  Score=126.99  Aligned_cols=230  Identities=17%  Similarity=0.216  Sum_probs=168.7

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhchhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhh
Q 019311           46 TLAILTKLLLLGLLEPVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAM  125 (343)
Q Consensus        46 ~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~  125 (343)
                      ++++.+++.+.+++. .+.+.+.+.++++++++..+++.++..+++++++++++|+|++++|      |.++.+.++|+.
T Consensus        13 ~~~~~~~~~vPA~lY-~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~q------W~aL~lL~~Gv~   85 (244)
T PF04142_consen   13 SPKDTLKLAVPALLY-AIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQ------WLALFLLVAGVV   85 (244)
T ss_pred             hHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhh------HHHHHHHHHHHh
Confidence            367788889999998 9999999999999999999999999999999999999999999998      999999999999


Q ss_pred             hheeecCcccccccccCCCCCCCC-CCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCchh-HHHHHHHHHHHHH
Q 019311          126 VMTLIKGPILELFWTKGAENHGHG-SSGTTTHNSIKGALMITAGCFSWSFFIILQAITLKAYPAEL-SLTAWICFFGTVE  203 (343)
Q Consensus       126 li~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~-~~~~~~~~~~~i~  203 (343)
                      ++...+....       +.+++++ ..+....+...|.++.++++++.++..+..++..|+.+.+. ....+....+.++
T Consensus        86 lv~~~~~~~~-------~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~  158 (244)
T PF04142_consen   86 LVQLSSSQSS-------DNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILF  158 (244)
T ss_pred             eeecCCcccc-------ccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHH
Confidence            9875433210       0000000 00123445679999999999999999999999999875333 3333444555555


Q ss_pred             HHHHHHHHccCCccceeecchhhHHHHHHHHHHHHHHHHHHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchh
Q 019311          204 GTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLG  283 (343)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~  283 (343)
                      .++.....+.....+.......++  ..+..++...++-.+....+||.+...=........+++.++++++++.+++..
T Consensus       159 ~~~~~~~~~~~~~~~~g~f~G~~~--~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~  236 (244)
T PF04142_consen  159 NLLALLLSDGSAISESGFFHGYSW--WVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLS  236 (244)
T ss_pred             HHHHHhcccccccccCCchhhcch--HHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchH
Confidence            544443333211111111111122  223333445556666777899999999999999999999999999999999999


Q ss_pred             hHHHHHHH
Q 019311          284 RIIGAIII  291 (343)
Q Consensus       284 ~~iG~~li  291 (343)
                      ..+|+.++
T Consensus       237 f~lg~~~V  244 (244)
T PF04142_consen  237 FLLGAALV  244 (244)
T ss_pred             HhhheecC
Confidence            99998753

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.66  E-value=1.9e-16  Score=131.32  Aligned_cols=260  Identities=15%  Similarity=0.251  Sum_probs=204.8

Q ss_pred             hCCCC-hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhchhH
Q 019311           10 NKGMS-PYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLEPVIDQNLYFIGMKYTTATFAAAMYNILP   88 (343)
Q Consensus        10 ~~~~~-p~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p   88 (343)
                      ..+++ |..-+|+.+..-+++.-+++.+++     +.-+..|+.++++++.- .-++.+...|.||++......+..-..
T Consensus        42 ~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~-----~~~~~~~~hYilla~~D-VEaNy~vV~AyQyTsmtSi~lLDcwai  115 (336)
T KOG2766|consen   42 RKGINAPTSQTFLNYVLLALVYGPIMLFRR-----KYIKAKWRHYILLAFVD-VEANYFVVKAYQYTSMTSIMLLDCWAI  115 (336)
T ss_pred             hccCCCccHHHHHHHHHHHHHHhhHHHhhh-----HHHHHHHHHhhheeEEe-ecccEEEeeehhhcchHHHHHHHHhhh
Confidence            44455 888999999999999998887633     23345577788889888 677777889999999999999998888


Q ss_pred             HHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhheeecCcccccccccCCCCCCCCCCCCCccchhHHHHHHHHH
Q 019311           89 AITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIKGALMITAG  168 (343)
Q Consensus        89 ~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a  168 (343)
                      ..+.+++|+++|.|.++.+      +.|+++|+.|+.+++..+-.               ..+..+..+..+|+.+.+++
T Consensus       116 p~v~~lsw~fLktrYrlmk------i~gV~iCi~GvvmvV~sDV~---------------agd~aggsnp~~GD~lvi~G  174 (336)
T KOG2766|consen  116 PCVLVLSWFFLKTRYRLMK------ISGVVICIVGVVMVVFSDVH---------------AGDRAGGSNPVKGDFLVIAG  174 (336)
T ss_pred             HHHHHHHHHHHHHHHhhhe------eeeEEeEecceEEEEEeeec---------------cccccCCCCCccCcEEEEec
Confidence            8889999999999999996      99999999999999854421               11123445677999999999


Q ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHHccCCccceeecchhhHHHHHHHHHHHHHHHHHHHHHh
Q 019311          169 CFSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGLTYYIQGIV  248 (343)
Q Consensus       169 ~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a  248 (343)
                      +-+||..++..+.+.|+.+ ...++.+..++++++..+. ++.+.  ......+.+......+. ..++.++-|.+...-
T Consensus       175 ATlYaVSNv~EEflvkn~d-~~elm~~lgLfGaIIsaIQ-~i~~~--~~~~tl~w~~~i~~yl~-f~L~MFllYsl~pil  249 (336)
T KOG2766|consen  175 ATLYAVSNVSEEFLVKNAD-RVELMGFLGLFGAIISAIQ-FIFER--HHVSTLHWDSAIFLYLR-FALTMFLLYSLAPIL  249 (336)
T ss_pred             ceeeeeccccHHHHHhcCc-HHHHHHHHHHHHHHHHHHH-Hhhhc--cceeeEeehHHHHHHHH-HHHHHHHHHHhhHHh
Confidence            9999999999999999876 6888888889999988888 44443  12222222222222222 444677777888888


Q ss_pred             hccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhccCc
Q 019311          249 MKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWGKS  303 (343)
Q Consensus       249 ~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~~~  303 (343)
                      ++..+++...+-..+.-.++.++  ..||-+.+|...+..+.+..|.+++..+.+
T Consensus       250 ~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~re~  302 (336)
T KOG2766|consen  250 IKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTREK  302 (336)
T ss_pred             eecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeecccc
Confidence            99999999999999999999998  567778999999999999999999855443

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.63  E-value=5.3e-13  Score=117.15  Aligned_cols=272  Identities=15%  Similarity=0.182  Sum_probs=195.5

Q ss_pred             CChhHHHHHHHHHHHHHHHHHHHHhccC---C-CCCC------CHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHH
Q 019311           13 MSPYVLVVYRHAAATIAMAPFAVILDKK---I-RPKM------TLAILTKLLLLGLLEPVIDQNLYFIGMKYTTATFAAA   82 (343)
Q Consensus        13 ~~p~~~~~~r~~~~~~~~~~~~~~~~~~---~-~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~   82 (343)
                      +.|.+.+++--.+-.++.....+...|+   + ...+      .+++.+++.+.+++. ++.+.+.|.++.+.+++..++
T Consensus        45 f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~vPa~iY-alqNnl~yval~~ldaatyqV  123 (345)
T KOG2234|consen   45 FLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSVPALIY-ALQNNLQYVALSNLDAATYQV  123 (345)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHHHHHHH-HHhhhHHHHHHhcCCchhhhh
Confidence            6688888888877777777666654322   1 1111      344567777777777 888889999999999999999


Q ss_pred             HhchhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhheeecCcccccccccCCCCCCCCCCCCCccchhHHH
Q 019311           83 MYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIKGA  162 (343)
Q Consensus        83 i~~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~  162 (343)
                      ...+..+.|+++.++++++|++++|      |.++++.++|+.++.+...+.            ..+.+.....+...|.
T Consensus       124 t~qlKI~tTA~f~vl~L~rkLs~~Q------w~Al~lL~~Gv~~vQ~~~~~~------------~~a~~~~~~~n~~~G~  185 (345)
T KOG2234|consen  124 TYQLKILTTAIFSVLILRRKLSRLQ------WMALVLLFAGVALVQLPSLSP------------TGAKSESSAQNPFLGL  185 (345)
T ss_pred             hhhHHHHHHHHHHHHHHhhhhhHHH------HHHHHHHHHHHHHHhccCCCC------------CCccCCCcccchhhhH
Confidence            9999999999999999999999998      999999999999998433211            0111123455678999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHH-HHHHHHHHHHHHHHHccCCccceeecchhhHHHHHHHHHHHHHHH
Q 019311          163 LMITAGCFSWSFFIILQAITLKAYPAELSLTAWI-CFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGLT  241 (343)
Q Consensus       163 ~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  241 (343)
                      ...+.++++.++-.+..++.+|+...+..+.-.+ .+++.++.+...+..+. +.-.|... -..|-...+..++..+.+
T Consensus       186 ~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~-~~i~~~gf-f~G~s~~vw~vVl~~a~g  263 (345)
T KOG2234|consen  186 VAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDG-EAINEYGF-FYGYSSIVWLVVLLNAVG  263 (345)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccc-cccccCCc-cccccHHHHHHHHHHhcc
Confidence            9999999999999999999998765444433333 44444444444444433 21111110 012222233333345555


Q ss_pred             HHHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhccCccC
Q 019311          242 YYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWGKSKD  305 (343)
Q Consensus       242 ~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~~~~~  305 (343)
                      -.+....++|.+...=+....+..+++.+.++.+++-+++....+|..+++.++.++...+.++
T Consensus       264 GLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~~  327 (345)
T KOG2234|consen  264 GLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPARD  327 (345)
T ss_pred             chhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCccc
Confidence            5556666788888777778889999999999999999999999999999999999998555444

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.59  E-value=5.6e-13  Score=115.31  Aligned_cols=277  Identities=13%  Similarity=0.102  Sum_probs=209.1

Q ss_pred             CcchhhhhhhCCCChhHHHH--HHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccchh
Q 019311            1 MDVLCKAALNKGMSPYVLVV--YRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLEPVIDQNLYFIGMKYTTAT   78 (343)
Q Consensus         1 ~~~~~k~~~~~~~~p~~~~~--~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~   78 (343)
                      |-+.+|.++...--|..+..  ++.+.+.+.+...-.. +--+.++++++..++++...++. .+....-..+++|.+..
T Consensus        27 m~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~-~lv~~~~l~~~~~kk~~P~~~lf-~~~i~t~~~slk~lnVp  104 (314)
T KOG1444|consen   27 MTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRL-GLVNFRPLDLRTAKKWFPVSLLF-VGMLFTGSKSLKYLNVP  104 (314)
T ss_pred             HHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHh-ceeecCCcChHHHHHHccHHHHH-HHHHHHccccccccCch
Confidence            34678888755333555555  7777766665544322 22335556788888888888777 66777777999999999


Q ss_pred             HHHHHhchhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhheeecCcccccccccCCCCCCCCCCCCCccch
Q 019311           79 FAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNS  158 (343)
Q Consensus        79 ~~~~i~~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (343)
                      ..+++.+..|+++++...+++|.+++...      |.++....+|......                       .+....
T Consensus       105 m~tv~kn~tii~~ai~E~lf~~~~~~~~v------~~Sv~~m~~~s~~~~~-----------------------~d~sf~  155 (314)
T KOG1444|consen  105 MFTVFKNLTIILTAIGEVLFFGKRPSNKV------WASVFAMIIGSVAAAF-----------------------TDLSFN  155 (314)
T ss_pred             HHHHHhhchHHHHHHhHHhhcCcCchhhH------HHHHHHHHHHHHhhcc-----------------------ccceec
Confidence            99999999999999999999999999887      9999988888877762                       223344


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhCC-chhHHHHHHHHHHHHHHHHHHHHHccCCcccee---ecchhhHHHHHHHH
Q 019311          159 IKGALMITAGCFSWSFFIILQAITLKAYP-AELSLTAWICFFGTVEGTLAALIMERGKASIWA---IHWDTKLVASVYSG  234 (343)
Q Consensus       159 ~~G~~~~l~a~~~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~  234 (343)
                      ..|..+++...++-+.+.+..|+..+..+ +.+.++++..+.+...+....++.+..+.....   ......+..+...+
T Consensus       156 ~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lSc  235 (314)
T KOG1444|consen  156 LRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSC  235 (314)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHH
Confidence            56999999999999999999998777544 457788999999998888888766542200111   12223455666666


Q ss_pred             HHHHHHHHHHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhccCccCCCCC
Q 019311          235 IICSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWGKSKDHKSP  309 (343)
Q Consensus       235 ~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~~~~~~~~~  309 (343)
                      ++ ++.-.++-..+.+..++...++++......+.+-..++.+++.++...+|..+-++|.+++.+.+.++++.+
T Consensus       236 v~-gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~~~  309 (314)
T KOG1444|consen  236 VM-GFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKKQP  309 (314)
T ss_pred             HH-HHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhccCC
Confidence            66 444445556899999999999999888888888888888889999999999999999999998776555544

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.59  E-value=5.3e-14  Score=104.57  Aligned_cols=136  Identities=17%  Similarity=0.160  Sum_probs=114.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHHccCCccceeecchhhHHHHHHHHHHHHHH
Q 019311          161 GALMITAGCFSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGL  240 (343)
Q Consensus       161 G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  240 (343)
                      ..+++++++++++...++.|-..++.+ |..-+..+.+...+.+....+....++.  -...++..|..++..|+ .+++
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~--~~~~~~k~~lflilSGl-a~gl   79 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEGVD-PDFATTIRTIVILIFLLIVLLVTGNWQA--GGEIGPKSWLFLILSGL-AGGL   79 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccccC-ccHHHHHHHHHHHHHHHHHHHhcCceec--ccccCcceehhhhHHHH-HHHH
Confidence            467999999999999999999888764 6777888888877777777765543111  11124557888888886 6999


Q ss_pred             HHHHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhc
Q 019311          241 TYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVW  300 (343)
Q Consensus       241 ~~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~  300 (343)
                      +..+|++|++..+++++.++--++|+++++++++++||++|..+|+|+.+|.+|.++..+
T Consensus        80 swl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          80 SWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            999999999999999999999999999999999999999999999999999999887654

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.48  E-value=1.2e-13  Score=102.77  Aligned_cols=118  Identities=19%  Similarity=0.236  Sum_probs=106.0

Q ss_pred             chhhhhhhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHH
Q 019311            3 VLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRP-KMTLAILTKLLLLGLLEPVIDQNLYFIGMKYTTATFAA   81 (343)
Q Consensus         3 ~~~k~~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~   81 (343)
                      ++.|.. -++++|...++.|-....++++.+....++.+.+ ..++|.|..+.+.|+.+ ++++.+||.|++...++..+
T Consensus        20 iF~KIG-l~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~-glswl~Yf~ALk~G~as~Vv   97 (140)
T COG2510          20 IFAKIG-LEGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAG-GLSWLLYFRALKKGKASRVV   97 (140)
T ss_pred             HHHHHh-ccccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHH-HHHHHHHHHHHhcCCcceEE
Confidence            567899 5779999999999999999999888876655433 24678899999999887 99999999999999999999


Q ss_pred             HHhchhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhhe
Q 019311           82 AMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMT  128 (343)
Q Consensus        82 ~i~~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~  128 (343)
                      .+..++|+++++++++++|||++..+      |+|+++..+|++++.
T Consensus        98 Pldk~svvl~~lls~lfL~E~ls~~~------~iG~~LI~~Gailvs  138 (140)
T COG2510          98 PLDKTSVVLAVLLSILFLGERLSLPT------WIGIVLIVIGAILVS  138 (140)
T ss_pred             EcccccHHHHHHHHHHHhcCCCCHHH------HHHHHHHHhCeeeEe
Confidence            99999999999999999999999998      999999999998875

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.48  E-value=1.6e-13  Score=106.69  Aligned_cols=125  Identities=26%  Similarity=0.411  Sum_probs=107.2

Q ss_pred             HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHHccCCccceeecchhhHHHHHHHHHHHHHHHHHHHHHhh
Q 019311          170 FSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGLTYYIQGIVM  249 (343)
Q Consensus       170 ~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~  249 (343)
                      ++||.+.+..|+..++.+ +....++++..+.+ .++.....+. ..  ....+...+...++.+++++.+++.++++++
T Consensus         1 ~~~a~~~~~~k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~   75 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKIS-PLSITFWRFLIAGI-LLILLLILGR-KP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYAL   75 (126)
T ss_pred             ceeeeHHHHHHHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhcc-cc--ccCCChhhhhhhhHhhccceehHHHHHHHHH
Confidence            478999999999999865 79999999999988 6666665554 21  2223445677788888887899999999999


Q ss_pred             ccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhh
Q 019311          250 KDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVV  299 (343)
Q Consensus       250 ~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~  299 (343)
                      ++.+++.++.+.+++|+++.++++++++|++++.+++|+++++.|+++..
T Consensus        76 ~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   76 KYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999998764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.47  E-value=2.6e-13  Score=105.52  Aligned_cols=119  Identities=24%  Similarity=0.454  Sum_probs=104.6

Q ss_pred             cchhhhhhhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHH
Q 019311            2 DVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLEPVIDQNLYFIGMKYTTATFAA   81 (343)
Q Consensus         2 ~~~~k~~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~   81 (343)
                      .++.|.. .+++||...+++|+..+.+ ++++..+.+++...+.+++++...+..|.+...+++.+++.++++.+++.++
T Consensus         7 ~~~~k~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~   84 (126)
T PF00892_consen    7 SVFSKKL-LKKISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISASIVS   84 (126)
T ss_pred             HHHHHHH-hccCCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcchhHHH
Confidence            4677888 4559999999999999998 6666666555545666788888899999886699999999999999999999


Q ss_pred             HHhchhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhhe
Q 019311           82 AMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMT  128 (343)
Q Consensus        82 ~i~~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~  128 (343)
                      ++.++.|+++.+++++++||++++++      ++|++++++|+.++.
T Consensus        85 ~~~~~~pv~~~i~~~~~~~e~~~~~~------~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   85 ILQYLSPVFAAILGWLFLGERPSWRQ------IIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHHH
Confidence            99999999999999999999999997      999999999998864

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.42  E-value=1e-12  Score=107.20  Aligned_cols=279  Identities=12%  Similarity=0.087  Sum_probs=199.4

Q ss_pred             chhhhhhhC-CCC-hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHH
Q 019311            3 VLCKAALNK-GMS-PYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLEPVIDQNLYFIGMKYTTATFA   80 (343)
Q Consensus         3 ~~~k~~~~~-~~~-p~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~   80 (343)
                      +-+|..++. |++ -+.+++++...+.+.++.+-+.+--+.+ ..+.|.|.   ..+.+. ..-.+.--.+++|.+....
T Consensus        23 ltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR-~t~aK~Wf---piSfLL-v~MIyt~SKsLqyL~vpiY   97 (309)
T COG5070          23 LTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFR-LTKAKKWF---PISFLL-VVMIYTSSKSLQYLAVPIY   97 (309)
T ss_pred             HhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhee-hhhhhhhc---CHHHHH-HHHHHhcccceeeeeeeHH
Confidence            345555422 333 4566677776666665544333211111 12233343   233332 2222334578999999999


Q ss_pred             HHHhchhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhheeecCcccccccccCCCCCCCCCCCCCccchhH
Q 019311           81 AAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIK  160 (343)
Q Consensus        81 ~~i~~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (343)
                      ++..++..+.++....+++|.|++...      ..+.++.+..-....+.+.+..                .-.....+.
T Consensus        98 TiFKNltII~iAygEvl~Fgg~vtsl~------l~SFilMvlSS~va~w~D~q~~----------------~~~~~~lN~  155 (309)
T COG5070          98 TIFKNLTIILIAYGEVLFFGGRVTSLE------LLSFILMVLSSVVATWGDQQAS----------------AFKAQILNP  155 (309)
T ss_pred             HHhccceeehhHhhHHHHhcCccchhh------HHHHHHHHHHHHHhccchhhHH----------------HHHhcccCC
Confidence            999999999999999999999999997      8888888888777776543211                112235567


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhCC-chhHHHHHHHHHHHHHHHHHHHHHccCCccceeec-chhhHHHHHHHHHHHH
Q 019311          161 GALMITAGCFSWSFFIILQAITLKAYP-AELSLTAWICFFGTVEGTLAALIMERGKASIWAIH-WDTKLVASVYSGIICS  238 (343)
Q Consensus       161 G~~~~l~a~~~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~  238 (343)
                      |.+|+..-++.-+.+...+|+-.+-.. .....+++..+.+..+++.+.++.|.+...+.... +.....++...|+. +
T Consensus       156 GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~-s  234 (309)
T COG5070         156 GYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLC-S  234 (309)
T ss_pred             ceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHH-H
Confidence            999999999999999999888666432 24778999999999999999998887555433222 22344566666665 4


Q ss_pred             HHHHHHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhccCccCCCCC
Q 019311          239 GLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWGKSKDHKSP  309 (343)
Q Consensus       239 ~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~~~~~~~~~  309 (343)
                      +.-.++-.+.++.++.+..+++..++..-..+-|.++++|+.+...+....+-.....++...+.++++++
T Consensus       235 vgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~q~q  305 (309)
T COG5070         235 VGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQQNQ  305 (309)
T ss_pred             hhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            44455567899999999999999999999999999999999999999999999998888887766555444

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.39  E-value=1.9e-11  Score=103.16  Aligned_cols=264  Identities=16%  Similarity=0.178  Sum_probs=186.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhccCCCCCC-------------CHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHH
Q 019311           15 PYVLVVYRHAAATIAMAPFAVILDKKIRPKM-------------TLAILTKLLLLGLLEPVIDQNLYFIGMKYTTATFAA   81 (343)
Q Consensus        15 p~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~   81 (343)
                      |+..+..-++.-+++++.+.+++.|...+..             +.+. ...+.-.++- ..+..+.|.++.+++++..+
T Consensus        39 pvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p-~lfl~Pal~D-i~gsslm~vgL~lTsASsfQ  116 (372)
T KOG3912|consen   39 PVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNP-VLFLPPALCD-IAGSSLMYVGLNLTSASSFQ  116 (372)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCc-ceecChHHHH-HhhhHHHHHHHHHhhHHHHH
Confidence            6666666566666777777777654332211             1111 1233466666 67788899999999999999


Q ss_pred             HHhchhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhheeecCcccccccccCCCCCCCCCCCCCccchhHH
Q 019311           82 AMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIKG  161 (343)
Q Consensus        82 ~i~~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G  161 (343)
                      ++.....+|+.+++.-+++++++.++      |+|+....+|+.++...+--.             ..+...+-+....|
T Consensus       117 MlRGaviIFvglfst~~Ln~ti~~~q------Wl~i~fv~lGlviVg~~d~~~-------------~~~p~~d~s~iitG  177 (372)
T KOG3912|consen  117 MLRGAVIIFVGLFSTMFLNRTITGRQ------WLGILFVSLGLVIVGSLDVHL-------------VTDPYTDYSSIITG  177 (372)
T ss_pred             HhhcchhhhhHHHHHHHHhcccchhh------HHHHHHHHhhhheeeeeeccc-------------ccCCccccccchhh
Confidence            99999999999999999999999997      999999999999987543110             00111223456789


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCC-chhHHHHHHHHHHHHHHHHHHHHHccC-Cccceee------cchhhHH-----
Q 019311          162 ALMITAGCFSWSFFIILQAITLKAYP-AELSLTAWICFFGTVEGTLAALIMERG-KASIWAI------HWDTKLV-----  228 (343)
Q Consensus       162 ~~~~l~a~~~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~------~~~~~~~-----  228 (343)
                      +++.+++-+.-|...++-+|.+++.. +|.....|..+++.+++..++.....- ....+..      .+..+.+     
T Consensus       178 dllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~~~~e  257 (372)
T KOG3912|consen  178 DLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFAALQE  257 (372)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHHHhcC
Confidence            99999999999999999999888775 689999999988876665555433210 0000100      0110111     


Q ss_pred             -HHHHHHHHHHHHHHHHHHH----hhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhh
Q 019311          229 -ASVYSGIICSGLTYYIQGI----VMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVV  299 (343)
Q Consensus       229 -~l~~~~~~~~~~~~~l~~~----a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~  299 (343)
                       ..++..+.+..++..+++.    -.++.++++-.++-.+...+-.+++.....|.++..|+.|.++.+.|++++.
T Consensus       258 ~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY~  333 (372)
T KOG3912|consen  258 SPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILYN  333 (372)
T ss_pred             CchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             1222233333334333333    3566788888889999999999999999999999999999999999999986

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.39  E-value=4.2e-12  Score=106.92  Aligned_cols=240  Identities=14%  Similarity=0.131  Sum_probs=166.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccc-chhHHHHHhchhHHHHHHHHHHHhhccccccccccchhhHHHHHH
Q 019311           42 RPKMTLAILTKLLLLGLLEPVIDQNLYFIGMKYT-TATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLAT  120 (343)
Q Consensus        42 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~-~~~~~~~i~~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~  120 (343)
                      +++++.|++......=    ...+.+-++++++- +...=.++.+-.++.++++++++.|+|.+.+|      +.++.+.
T Consensus        59 k~kiplk~Y~i~V~mF----F~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Q------y~Sv~~i  128 (330)
T KOG1583|consen   59 KPKIPLKDYAITVAMF----FIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQ------YSSVLMI  128 (330)
T ss_pred             CCCCchhhhheehhee----eeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhh------hhhHHhh
Confidence            4556666555443322    44566667888874 44444555588999999999999999999998      9999999


Q ss_pred             HhhhhhheeecCcccccccccCCCCCCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCC-chhHHHHHHHHH
Q 019311          121 VAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIKGALMITAGCFSWSFFIILQAITLKAYP-AELSLTAWICFF  199 (343)
Q Consensus       121 ~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~  199 (343)
                      .+|+++.++.+.++...  ...+.  ++++.......+..|+.+...+-+.-|...+.++...++++ ++-..+++....
T Consensus       129 TiGiiIcTl~s~~d~~~--~~~~l--~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~L  204 (330)
T KOG1583|consen  129 TIGIIICTLFSSKDGRS--KLSGL--DSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFL  204 (330)
T ss_pred             hhhheeEEeecCcchhh--hhccc--ccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHh
Confidence            99999999776543211  00011  12222344456778999999999999999999999888886 566777777666


Q ss_pred             HHHHHHHHHHHHccC---------Ccc-----ceeecchhhHHHHHHHHHHHHHHHHHHHHHhhccCCceeeeechhHHH
Q 019311          200 GTVEGTLAALIMERG---------KAS-----IWAIHWDTKLVASVYSGIICSGLTYYIQGIVMKDRGPVFVAAFSPLCM  265 (343)
Q Consensus       200 ~~i~~~~~~~~~~~~---------~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~p  265 (343)
                      +...    .++....         ..+     .....-+..|..++.-.+ ..-.|.-..+.-..+.++.+++++..++.
T Consensus       205 sLP~----Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L-~Qy~CikgVy~L~te~~sLTVTlvltlRK  279 (330)
T KOG1583|consen  205 SLPL----FLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVL-TQYFCIKGVYILTTETSSLTVTLVLTLRK  279 (330)
T ss_pred             ccch----HHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHH-HHHHHHHhhhhhhceecceEEEEeeeHHH
Confidence            5543    3332220         001     111112224444444333 34444444555667788999999999999


Q ss_pred             HHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhc
Q 019311          266 VIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVW  300 (343)
Q Consensus       266 v~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~  300 (343)
                      .++.+++.+.|+++++++.|+|.++++.|.+++..
T Consensus       280 FvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~  314 (330)
T KOG1583|consen  280 FVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFAN  314 (330)
T ss_pred             HHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999888864

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=99.35  E-value=4.6e-10  Score=96.78  Aligned_cols=251  Identities=15%  Similarity=0.143  Sum_probs=175.0

Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCC--HHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHh-chhHHH
Q 019311           14 SPYVLVVYRHAAATIAMAPFAVILDKKIRPKMT--LAILTKLLLLGLLEPVIDQNLYFIGMKYTTATFAAAMY-NILPAI   90 (343)
Q Consensus        14 ~p~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~p~~   90 (343)
                      +|.+-.+---..+.++-+ ......+   +..+  .+.+...++.|++= .+.+.+.+.++++...+.+..+. .++-+.
T Consensus        11 ~~~~Q~lG~t~Gali~al-v~~~~~~---p~~~~~~~~~~~~~lsG~~W-~iGq~~qf~s~~~~GVS~tmPiStg~QLvg   85 (269)
T PF06800_consen   11 KPANQILGTTIGALIFAL-VVFLFRQ---PAFSMSGTSFIVAFLSGAFW-AIGQIGQFKSFKKIGVSKTMPISTGLQLVG   85 (269)
T ss_pred             cHHHHHHHHHHHHHHHHH-HHHHHhC---CCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcceeeeccchhHHHHH
Confidence            455554443333333333 3333233   3343  37788888888887 99999999999999999999999 888888


Q ss_pred             HHHHHHHHhhccccccccccchhhHHHHHHHhhhhhheeecCcccccccccCCCCCCCCCCCCCccchhHHHHHHHHHHH
Q 019311           91 TFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIKGALMITAGCF  170 (343)
Q Consensus        91 ~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~  170 (343)
                      +.+++.++++|.-+..++.  .=..++++.++|+.+....++++               +...+..+...|....+++.+
T Consensus        86 ~sl~gv~~fgEW~~~~~~~--~G~~Al~liiiGv~lts~~~~~~---------------~~~~~~~~~~kgi~~Ll~sti  148 (269)
T PF06800_consen   86 TSLIGVLFFGEWTTTTQKI--IGFLALVLIIIGVILTSYQDKKS---------------DKSSSKSNMKKGILALLISTI  148 (269)
T ss_pred             HHHHHHhhcCCCCCcchHH--HHHHHHHHHHHHHHHhccccccc---------------cccccccchhhHHHHHHHHHH
Confidence            9999999999998877610  01236778888888887544321               001123456789999999999


Q ss_pred             HHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHHccCCccceeecchhhHHHHHHHHHHHHHHHHHHHHHhhc
Q 019311          171 SWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGLTYYIQGIVMK  250 (343)
Q Consensus       171 ~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~  250 (343)
                      .|..|.+..|.. + . ++.....-+.+...+....+....+.    ..  ..... +.-+..|++ -.++..++..+.+
T Consensus       149 gy~~Y~~~~~~~-~-~-~~~~~~lPqaiGm~i~a~i~~~~~~~----~~--~~k~~-~~nil~G~~-w~ignl~~~is~~  217 (269)
T PF06800_consen  149 GYWIYSVIPKAF-H-V-SGWSAFLPQAIGMLIGAFIFNLFSKK----PF--FEKKS-WKNILTGLI-WGIGNLFYLISAQ  217 (269)
T ss_pred             HHHHHHHHHHhc-C-C-ChhHhHHHHHHHHHHHHHHHhhcccc----cc--cccch-HHhhHHHHH-HHHHHHHHHHhHH
Confidence            999999986662 2 2 46666666555554444444433211    11  11212 333455664 6778888999999


Q ss_pred             cCCceeeeechhHHHHHHHHHHHHHhccccchh----hHHHHHHHHHhhhh
Q 019311          251 DRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLG----RIIGAIIIIGGLYL  297 (343)
Q Consensus       251 ~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~----~~iG~~li~~G~~l  297 (343)
                      +.+.+..=.+.-+.++++.+.+.+++||+=+..    .++|.+++++|.++
T Consensus       218 ~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  218 KNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             hccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence            999999999999999999999999999986655    56788888888764

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.32  E-value=6.4e-12  Score=95.89  Aligned_cols=105  Identities=18%  Similarity=0.329  Sum_probs=88.0

Q ss_pred             HHHHHHHHHHHHHHHHHhccCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhchhHHHHHHHHHH
Q 019311           20 VYRHAAATIAMAPFAVILDKKI--RPKMTLAILTKLLLLGLLEPVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWI   97 (343)
Q Consensus        20 ~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lla~~   97 (343)
                      .+|+..+.+++..+...+++.+  .+..+++.+.+++..|.++...++.++++|+++.+ +.++++.++.|+++.+++++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            5799999999988888754432  12223455677788888885699999999999999 58889999999999999999


Q ss_pred             HhhccccccccccchhhHHHHHHHhhhhhheeec
Q 019311           98 IRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIK  131 (343)
Q Consensus        98 ~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~~~  131 (343)
                      ++|||+++++      +++++++++|+.++...+
T Consensus        81 ~~~er~~~~~------~~a~~l~~~Gv~li~~~~  108 (113)
T PF13536_consen   81 FFKERLSPRR------WLAILLILIGVILIAWSD  108 (113)
T ss_pred             HhcCCCCHHH------HHHHHHHHHHHHHHhhhh
Confidence            9999999997      999999999999998543

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.29  E-value=8e-12  Score=105.11  Aligned_cols=277  Identities=14%  Similarity=0.109  Sum_probs=195.4

Q ss_pred             hhhhhhhC---CCC-hhHHHHHHHHHHHHHHHHHHHHhccCC----CC--CCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 019311            4 LCKAALNK---GMS-PYVLVVYRHAAATIAMAPFAVILDKKI----RP--KMTLAILTKLLLLGLLEPVIDQNLYFIGMK   73 (343)
Q Consensus         4 ~~k~~~~~---~~~-p~~~~~~r~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~al~   73 (343)
                      .+|.+++.   ..+ |..+.+...+....+.+.+.....+-.    .+  +++.+..+..+.+.+.. .+...+-+.+++
T Consensus        46 ~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVf-i~mI~fnnlcL~  124 (347)
T KOG1442|consen   46 LNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVF-ILMISFNNLCLK  124 (347)
T ss_pred             hHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhhee-eeehhccceehh
Confidence            45555432   233 788888888777776666555432211    11  23444444555555443 333444568999


Q ss_pred             ccchhHHHHHhchhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhheeecCcccccccccCCCCCCCCCCCC
Q 019311           74 YTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIKGPILELFWTKGAENHGHGSSGT  153 (343)
Q Consensus        74 ~~~~~~~~~i~~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (343)
                      |++.+...+=.++..+|++++.++++|+|-+..-      ..++++++.|-.+-.  +.+                  +.
T Consensus       125 yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~------~~~C~lIi~GF~lGv--dqE------------------~~  178 (347)
T KOG1442|consen  125 YVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFA------LGCCLLIILGFGLGV--DQE------------------GS  178 (347)
T ss_pred             hcceEEEEeccchhhhHHHHhHHhhccccccccc------ceeehhheehheecc--ccc------------------cc
Confidence            9999999999999999999999999999999986      777777777766544  111                  13


Q ss_pred             CccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCc-hhHHHHHHHHHHHHHHHHHHHHHccCCcccee---ecchhhHHH
Q 019311          154 TTHNSIKGALMITAGCFSWSFFIILQAITLKAYPA-ELSLTAWICFFGTVEGTLAALIMERGKASIWA---IHWDTKLVA  229 (343)
Q Consensus       154 ~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~  229 (343)
                      .+.-.+.|.++++.++++-|+..+..|+......+ -+.+++++.+.+.++.+|...+.+. -.+.+.   ......|..
T Consensus       179 ~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge-~~~v~~~~~l~a~~Fw~~  257 (347)
T KOG1442|consen  179 TGTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGE-FQAVVGFPHLPAIKFWIL  257 (347)
T ss_pred             cCccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcch-HHHHcCcccchHHHHHHH
Confidence            34566799999999999999999998876655443 4788889999999999998876543 111121   223334544


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhccCccCCCCC
Q 019311          230 SVYSGIICSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWGKSKDHKSP  309 (343)
Q Consensus       230 l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~~~~~~~~~  309 (343)
                      +...|++ ++.-.+.-..=+|-++|.+-.+-....-..-.+++..+++|.-+..-|-|-.++++|...+.+.+.++.+++
T Consensus       258 mtLsglf-gF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~  336 (347)
T KOG1442|consen  258 MTLSGLF-GFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKA  336 (347)
T ss_pred             HHHHHHH-HHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhh
Confidence            5555554 333333334457889999999999999999999999999999999999999999999999998776555443

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.26  E-value=5.1e-11  Score=100.14  Aligned_cols=229  Identities=14%  Similarity=0.156  Sum_probs=177.3

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhchhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhh
Q 019311           44 KMTLAILTKLLLLGLLEPVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAG  123 (343)
Q Consensus        44 ~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~G  123 (343)
                      ..+||.   +..++.+. .....+.+-++.|++-....+...+.-+-+++.+.++-+.|.++.+      +++..+..+|
T Consensus       103 ~iP~rt---Y~~la~~t-~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d------~~aA~lm~lG  172 (367)
T KOG1582|consen  103 VIPWRT---YVILAFLT-VGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHD------YIAAMLMSLG  172 (367)
T ss_pred             ecchhH---hhhhHhhh-hhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHH------HHHHHHHHHH
Confidence            345444   34444444 5566677789999998888888888888888899999999999998      9999999999


Q ss_pred             hhhheeecCcccccccccCCCCCCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCC-chhHHHHHHHHHHHH
Q 019311          124 AMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIKGALMITAGCFSWSFFIILQAITLKAYP-AELSLTAWICFFGTV  202 (343)
Q Consensus       124 v~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~i  202 (343)
                      .++.++.+.                   ...++.+..|..+.-.+-++-|.-..++++..+..+ +...+.++....+.+
T Consensus       173 li~FTLADs-------------------~~sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~v  233 (367)
T KOG1582|consen  173 LIWFTLADS-------------------QTSPNFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFV  233 (367)
T ss_pred             HHhhhhccc-------------------ccCCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHH
Confidence            999997665                   244556778999999999999999999999998876 346677778888888


Q ss_pred             HHHHHHHHHccCCccceee---cchhhHHHHHHHHHHHHHHHHHHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccc
Q 019311          203 EGTLAALIMERGKASIWAI---HWDTKLVASVYSGIICSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQ  279 (343)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~  279 (343)
                      .++..+..... -.+.|+.   ++.......++.+. .+.++......-++..++..++.+......+++++++++|..+
T Consensus       234 flf~~mvlTge-~f~a~~fcaehp~~tyGy~~~~s~-~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKP  311 (367)
T KOG1582|consen  234 FLFAPMVLTGE-LFSAWTFCAEHPVRTYGYAFLFSL-AGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKP  311 (367)
T ss_pred             HHHHHHHhccc-chhhhHHHHhCcHhHHHHHHHHHH-HhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCc
Confidence            87777765543 3334432   12223333334344 3566666666678889999999999999999999999999999


Q ss_pred             cchhhHHHHHHHHHhhhhhhccCc
Q 019311          280 MYLGRIIGAIIIIGGLYLVVWGKS  303 (343)
Q Consensus       280 ~~~~~~iG~~li~~G~~l~~~~~~  303 (343)
                      ++.+..-|..+++.|+++-.+.++
T Consensus       312 fT~qy~~~gllv~lgI~Ln~ysk~  335 (367)
T KOG1582|consen  312 FTEQYVWSGLLVVLGIYLNMYSKR  335 (367)
T ss_pred             hHHHHhhhhHHHHHHHHhhcccCC
Confidence            999999999999999999887663

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=99.25  E-value=9.5e-11  Score=94.02  Aligned_cols=211  Identities=11%  Similarity=0.107  Sum_probs=154.8

Q ss_pred             HHHHHHHHHhhcccchhHHHHHhchhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhheeecCccccccccc
Q 019311           62 VIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIKGPILELFWTK  141 (343)
Q Consensus        62 ~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~~~~~~~~~~~~~  141 (343)
                      .+.++.|..+++..+++.++.+..+...|+.+++++++|+|+....      +++.++++.|+.++...+.         
T Consensus        64 t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~k------IlaailAI~GiVmiay~DN---------  128 (290)
T KOG4314|consen   64 TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFK------ILAAILAIGGIVMIAYADN---------  128 (290)
T ss_pred             ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhh------HHHHHHHhCcEEEEEeccc---------
Confidence            5678899999999999999999999999999999999999999996      9999999999999884432         


Q ss_pred             CCCCCCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHH----HHHHHHHHHHccCCcc
Q 019311          142 GAENHGHGSSGTTTHNSIKGALMITAGCFSWSFFIILQAITLKAYPAELSLTAWICFFGT----VEGTLAALIMERGKAS  217 (343)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~----i~~~~~~~~~~~~~~~  217 (343)
                                  ...+.+.|..+++.+++..|.|-+..|+......- -....++...++    +...|...+.-. ..+
T Consensus       129 ------------~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~-Gdaa~FmS~LGF~NL~~~~~~~lIL~~T-~VE  194 (290)
T KOG4314|consen  129 ------------EHADEIIGIACAVGSAFMAALYKVLFKMFIGNANF-GDAAHFMSCLGFFNLCFISFPALILAFT-GVE  194 (290)
T ss_pred             ------------hhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcc-hhHHHHHHHHHHHHHHHHhhhHHHHHHh-chH
Confidence                        44577899999999999999999999998876531 111111111111    111111111111 333


Q ss_pred             ceeecchhhHHHHHHHHHHHHHHHHHHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhh
Q 019311          218 IWAIHWDTKLVASVYSGIICSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYL  297 (343)
Q Consensus       218 ~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l  297 (343)
                      +|+......|..+...+.+ +..-..+.+.++..+.|...++-+.....--...+.++-+-..+.....|.++|..|.++
T Consensus       195 ~~qsFA~~PWG~l~G~A~L-~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiL  273 (290)
T KOG4314|consen  195 HLQSFAAAPWGCLCGAAGL-SLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFIL  273 (290)
T ss_pred             HHHHHhhCCchhhhhHHHH-HHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHh
Confidence            4432222345555555554 344455667788888888888888888888889997766667899999999999999888


Q ss_pred             hhccC
Q 019311          298 VVWGK  302 (343)
Q Consensus       298 ~~~~~  302 (343)
                      .....
T Consensus       274 iiiP~  278 (290)
T KOG4314|consen  274 IIIPE  278 (290)
T ss_pred             eeccc
Confidence            87543

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.24  E-value=1.6e-10  Score=93.26  Aligned_cols=139  Identities=17%  Similarity=0.190  Sum_probs=114.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhC------CchhHHHHHHHHHHHHHHHHHHHHHccCCccceee-------c-chhh
Q 019311          161 GALMITAGCFSWSFFIILQAITLKAY------PAELSLTAWICFFGTVEGTLAALIMERGKASIWAI-------H-WDTK  226 (343)
Q Consensus       161 G~~~~l~a~~~~a~~~i~~k~~~~~~------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-------~-~~~~  226 (343)
                      |.++++.+.++.+++.+..|+..++.      .++..+..+....+.+.+.+..++.|.+.......       . ....
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            67899999999999999999988873      27899999999999999999998887632111110       0 2234


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhc
Q 019311          227 LVASVYSGIICSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVW  300 (343)
Q Consensus       227 ~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~  300 (343)
                      +..++..|++ ........+..+++++|...+++..++.++..++++++++|+++..+++|.++.++|.++++|
T Consensus        81 ~~~~~~~~~~-~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLL-AFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            4455555554 677788888999999999999999999999999999999999999999999999999998764

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.23  E-value=1.6e-10  Score=103.75  Aligned_cols=139  Identities=13%  Similarity=0.153  Sum_probs=110.7

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHHccCCcccee--ecchhhHHHHHHHH
Q 019311          157 NSIKGALMITAGCFSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWA--IHWDTKLVASVYSG  234 (343)
Q Consensus       157 ~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~  234 (343)
                      +..+|.+++++++++|+...+..|.. .+.+ |....++++.++.+++.++.....+  .....  ..+...+ .....+
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~   79 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICRQ--WSYLKTLIQTPQKI-FMLAVS   79 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHcc--HHHHHHHHcCHHHH-HHHHHH
Confidence            55689999999999999999999874 5554 8999999999998877766543321  11100  0112222 333456


Q ss_pred             HHHHHHHHHHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhc
Q 019311          235 IICSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVW  300 (343)
Q Consensus       235 ~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~  300 (343)
                      .++.+..+.++++++++.+++.++++.++.|+++.++++++++|+++..+++|+++.++|+.+...
T Consensus        80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~  145 (296)
T PRK15430         80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLW  145 (296)
T ss_pred             HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH
Confidence            666788899999999999999999999999999999999999999999999999999999887753

>TIGR00688 rarD rarD protein

Probab=99.19  E-value=2.9e-10  Score=99.89  Aligned_cols=138  Identities=12%  Similarity=0.167  Sum_probs=108.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHHccCCc--cceeec-chhhHHHHHHHHHH
Q 019311          160 KGALMITAGCFSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKA--SIWAIH-WDTKLVASVYSGII  236 (343)
Q Consensus       160 ~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~-~~~~~~~l~~~~~~  236 (343)
                      +|..+.++++++|+...+..|. ..+. +|..+.+++++++++.+.++.........  ..++.. ....+..+...|++
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~-~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LKPL-PATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hccC-CHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            4888999999999999999998 4445 48999999999998887766544322000  111111 11123344555554


Q ss_pred             HHHHHHHHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhc
Q 019311          237 CSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVW  300 (343)
Q Consensus       237 ~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~  300 (343)
                       .+..+.++++++++++++.++.+.++.|+++.++++++++|+++.++++|+++.++|+.+...
T Consensus        80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~  142 (256)
T TIGR00688        80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIV  142 (256)
T ss_pred             -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence             788999999999999999999999999999999999999999999999999999999887643

This uncharacterized protein is predicted to have many membrane-spanning domains.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.13  E-value=1.2e-09  Score=97.29  Aligned_cols=133  Identities=14%  Similarity=0.108  Sum_probs=102.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHHccCCccceeecchhhHHHHHHHHHHHHHHH
Q 019311          162 ALMITAGCFSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGLT  241 (343)
Q Consensus       162 ~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  241 (343)
                      ..+.++++++||...+..|+..++.+ +.  ..+....+.+...|+......  ...++..+. .++.....+.+.....
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~~-~~--~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~   76 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKEP-DF--LWWALLAHSVLLTPYGLWYLA--QVGWSRLPA-TFWLLLAISAVANMVY   76 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCchh-HH--HHHHHHHHHHHHHHHHHHhcc--cCCCCCcch-hhHHHHHHHHHHHHHH
Confidence            46789999999999999998777643 32  355555666666666543211  122332222 3344444555568889


Q ss_pred             HHHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhc
Q 019311          242 YYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVW  300 (343)
Q Consensus       242 ~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~  300 (343)
                      +.++++++++.+++.++++.+++|+++.+++++++||+++..+++|+++++.|+.+...
T Consensus        77 ~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~  135 (281)
T TIGR03340        77 FLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL  135 (281)
T ss_pred             HHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999999999999988764

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=99.01  E-value=8.4e-09  Score=79.82  Aligned_cols=122  Identities=16%  Similarity=0.131  Sum_probs=94.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHHccCCccceeecchhhHHHHHHHHHHHHH
Q 019311          160 KGALMITAGCFSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSG  239 (343)
Q Consensus       160 ~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  239 (343)
                      .|.++.+++.++-+...++.|+..++.++ ...... .    . ......   .            .....+++|+++++
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~-~~~~~~-~----~-~~~~~~---~------------~p~~~i~lgl~~~~   59 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPL-LSHAWD-F----I-AALLAF---G------------LALRAVLLGLAGYA   59 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCC-ccchhH-H----H-HHHHHH---h------------ccHHHHHHHHHHHH
Confidence            36788999999999999999999888653 221111 0    0 000010   0            11235778888999


Q ss_pred             HHHHHHHHhhccCCceeeeechhHHHHHHHHHHHH--HhccccchhhHHHHHHHHHhhhhhhccCc
Q 019311          240 LTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTI--ILAEQMYLGRIIGAIIIIGGLYLVVWGKS  303 (343)
Q Consensus       240 ~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~--~~~e~~~~~~~iG~~li~~G~~l~~~~~~  303 (343)
                      +++.+|.+++++.+++.+.++....+++..+.++.  ++||++++.+++|+++|++|+++..+.++
T Consensus        60 la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~  125 (129)
T PRK02971         60 LSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT  125 (129)
T ss_pred             HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence            99999999999999999999999998888888885  79999999999999999999999876444

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.00  E-value=7.9e-09  Score=94.57  Aligned_cols=141  Identities=12%  Similarity=0.080  Sum_probs=115.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHHccCCccceeecchhhHHHHHHHHHHH
Q 019311          158 SIKGALMITAGCFSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIIC  237 (343)
Q Consensus       158 ~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  237 (343)
                      ...-.+.+++.-++|+.+.++.|...+..-+|....++++.+++++++++.+..+. . ...+..+...+..+...|++.
T Consensus        11 ~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~-~-~~~~~~~~~~~~~l~l~g~~g   88 (358)
T PLN00411         11 EAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNR-S-RSLPPLSVSILSKIGLLGFLG   88 (358)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHH-h-cccCcchHHHHHHHHHHHHHH
Confidence            44566778888999999999999999876678999999999999999988875442 1 111211233566677777765


Q ss_pred             HHHHHHHHHHhhccCCceeeeechhHHHHHHHHHHHHH------hccccchhhHHHHHHHHHhhhhhhcc
Q 019311          238 SGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTII------LAEQMYLGRIIGAIIIIGGLYLVVWG  301 (343)
Q Consensus       238 ~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~------~~e~~~~~~~iG~~li~~G~~l~~~~  301 (343)
                       ...+.+++.++++++++.++++.++.|++++++++++      ++|+++..+++|.++.++|+.+....
T Consensus        89 -~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~  157 (358)
T PLN00411         89 -SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFY  157 (358)
T ss_pred             -HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHc
Confidence             5666789999999999999999999999999999999      69999999999999999999887653

>TIGR00803 nst UDP-galactose transporter

Probab=98.99  E-value=1.6e-09  Score=93.11  Aligned_cols=213  Identities=13%  Similarity=0.054  Sum_probs=128.1

Q ss_pred             hhHHHHHhchhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhheeecCcccccc-----cccCCCCCCCCCC
Q 019311           77 ATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIKGPILELF-----WTKGAENHGHGSS  151 (343)
Q Consensus        77 ~~~~~~i~~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~~~~~~~~~~-----~~~~~~~~~~~~~  151 (343)
                      ........+..++++++..+.+.++|.+..      |+++.++...|+....+.+.+.....     ....+.++ +.+.
T Consensus         4 vPa~~~~~s~~l~~v~l~~~~~~~~~~~~~------~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~-~~~~   76 (222)
T TIGR00803         4 VPIHIIFKQNNLVLIALGNLLAAGKQVTQL------KILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQ-SSAK   76 (222)
T ss_pred             ccchHHHHhcchHHHHHhcccccceeeehH------HHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCC-CCcc
Confidence            344566678889999999998999998865      49999999998876554332210000     00000000 0000


Q ss_pred             CCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHH-HHHHHHHHHHHHHHccCCccceeecchhhHHHH
Q 019311          152 GTTTHNSIKGALMITAGCFSWSFFIILQAITLKAYPAELSLTAWIC-FFGTVEGTLAALIMERGKASIWAIHWDTKLVAS  230 (343)
Q Consensus       152 ~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l  230 (343)
                      .....+...|..+.+.+.++-+...+.+++..|+.+.......... ..+.+.........+......+....  .+...
T Consensus        77 ~~~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  154 (222)
T TIGR00803        77 TLMFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFI--GYPTA  154 (222)
T ss_pred             ccccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCccc--CCchH
Confidence            0111255678777888888888888888887665432211111111 22222111111111110001111000  01111


Q ss_pred             HHHHHHHHHHHHHHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhh
Q 019311          231 VYSGIICSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLV  298 (343)
Q Consensus       231 ~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~  298 (343)
                      .+.-++..+++..+....+++.++...+....++++++.+++++++||+++..+++|+.+++.|++++
T Consensus       155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            11222346667778889999999999999999999999999999999999999999999999998753

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.96  E-value=9.1e-09  Score=90.55  Aligned_cols=114  Identities=23%  Similarity=0.324  Sum_probs=94.0

Q ss_pred             chhhhhhhCCCCh--hHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHH
Q 019311            3 VLCKAALNKGMSP--YVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLEPVIDQNLYFIGMKYTTATFA   80 (343)
Q Consensus         3 ~~~k~~~~~~~~p--~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~   80 (343)
                      +..|.. .++.+|  .....+++.++.++++++.+...+.  ...+++.+...+..++++...++.+++.++++.+++.+
T Consensus       145 ~~~k~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~  221 (260)
T TIGR00950       145 VLYKRL-VKKEGPELLQFTGWVLLLGALLLLPFAWFLGPN--PQALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAA  221 (260)
T ss_pred             HHHhHH-hhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCC--CCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHH
Confidence            456777 344564  4555578999999888887764332  23356778788888888878999999999999999999


Q ss_pred             HHHhchhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhh
Q 019311           81 AAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAM  125 (343)
Q Consensus        81 ~~i~~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~  125 (343)
                      +++.++.|+++.++++++++|+++..+      ++|..+.+.|++
T Consensus       222 s~~~~~~pv~~~ll~~~~~~E~~~~~~------~~G~~li~~g~~  260 (260)
T TIGR00950       222 SILALAEPLVALLLGLLILGETLSLPQ------LIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHhcC
Confidence            999999999999999999999999997      999999999864

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.93  E-value=3.2e-08  Score=88.21  Aligned_cols=224  Identities=15%  Similarity=0.202  Sum_probs=128.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhchhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhheeec
Q 019311           52 KLLLLGLLEPVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIK  131 (343)
Q Consensus        52 ~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~~~  131 (343)
                      +....|++...++..+-+.|+.+.|.+..+.+..+.-++.++++..++|||+++++      +.|+.+++.|..++....
T Consensus        51 ~~W~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~------~~G~~l~i~G~~liv~~~  124 (300)
T PF05653_consen   51 PLWWIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRD------IVGCALIILGSVLIVIFA  124 (300)
T ss_pred             HHHHHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhH------HhhHHHHHhhheeeEEeC
Confidence            44566666667888888999999999999999999999999999999999999998      999999999998887543


Q ss_pred             CcccccccccCCCCCCCCCCCCCc------cchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHH---
Q 019311          132 GPILELFWTKGAENHGHGSSGTTT------HNSIKGALMITAGCFSWSFFIILQAITLKAYPAELSLTAWICFFGTV---  202 (343)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i---  202 (343)
                      .++.             +..+.+.      +........... .+...+.....+|..++.  ...........++.   
T Consensus       125 ~~~~-------------~~~t~~~l~~~~~~~~fl~y~~~~~-~~~~~L~~~~~~r~g~~~--i~vyi~i~sl~Gs~tvl  188 (300)
T PF05653_consen  125 PKEE-------------PIHTLDELIALLSQPGFLVYFILVL-VLILILIFFIKPRYGRRN--ILVYISICSLIGSFTVL  188 (300)
T ss_pred             CCCC-------------CcCCHHHHHHHhcCcceehhHHHHH-HHHHHHHHhhcchhcccc--eEEEEEEeccccchhhh
Confidence            2210             0000000      000011111111 122222222222222211  11000000011110   


Q ss_pred             ----HHHHHHHHHccCCccceeecchhhHHHHHHHHHHHHHHHHHHHHHhhccCCceeeeechhHHH-HHHHHHHHHHhc
Q 019311          203 ----EGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGLTYYIQGIVMKDRGPVFVAAFSPLCM-VIVAIMSTIILA  277 (343)
Q Consensus       203 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~p-v~~~ll~~~~~~  277 (343)
                          +...+....++    +.....+..|..++. .+.+........++|+++.+++.+.++.+.-= ..+++-|.++++
T Consensus       189 ~~K~i~~~i~~~~~g----~~~f~~~~~y~l~~~-~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~  263 (300)
T PF05653_consen  189 SAKAISILIKLTFSG----DNQFTYPLTYLLLLV-LVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQ  263 (300)
T ss_pred             HHHHHHHHHHHHhcC----chhhhhhHHHHHHHH-HHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhc
Confidence                11111110111    111222334433333 34345666667788999999998888777654 455555667788


Q ss_pred             cc--cch----hhHHHHHHHHHhhhhhhccC
Q 019311          278 EQ--MYL----GRIIGAIIIIGGLYLVVWGK  302 (343)
Q Consensus       278 e~--~~~----~~~iG~~li~~G~~l~~~~~  302 (343)
                      |.  .+.    ....|..+++.|+++....+
T Consensus       264 e~~~~~~~~~~~~~~G~~~ii~GV~lL~~~~  294 (300)
T PF05653_consen  264 EFSRMTAWQIIGFLCGFLIIIIGVFLLSSSK  294 (300)
T ss_pred             ccccccHHHHHHHHHHHHHHHHhhheeeccC
Confidence            75  344    35677888888988886543

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.89  E-value=4.3e-08  Score=87.85  Aligned_cols=132  Identities=10%  Similarity=0.065  Sum_probs=106.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHHccCCccceeecchhhHHHHHHHHHHHHHHH
Q 019311          162 ALMITAGCFSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGLT  241 (343)
Q Consensus       162 ~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  241 (343)
                      ....++..+.|+...+..|...+.. +|....++++..+.++++++......    ..  .+..++......|.+.....
T Consensus        10 ~~~~~~~~~iWg~~~~~~K~~~~~~-~p~~~~~~R~~~a~l~ll~~~~~~~~----~~--~~~~~~~~~~~~g~~~~~~~   82 (292)
T PRK11272         10 FGALFALYIIWGSTYLVIRIGVESW-PPLMMAGVRFLIAGILLLAFLLLRGH----PL--PTLRQWLNAALIGLLLLAVG   82 (292)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHhccC-CHHHHHHHHHHHHHHHHHHHHHHhCC----CC--CcHHHHHHHHHHHHHHHHHH
Confidence            4556777999999999999887765 48999999999999888877653221    11  12335556667777655677


Q ss_pred             HHHHHHhh-ccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhcc
Q 019311          242 YYIQGIVM-KDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWG  301 (343)
Q Consensus       242 ~~l~~~a~-~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~  301 (343)
                      +.+++.+. ++.+++.++++.++.|+++.+++++ ++|+++..+++|..+.++|+.+....
T Consensus        83 ~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~  142 (292)
T PRK11272         83 NGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSG  142 (292)
T ss_pred             HHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcC
Confidence            78888888 9999999999999999999999985 79999999999999999999887643

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.89  E-value=1e-08  Score=78.09  Aligned_cols=107  Identities=18%  Similarity=0.309  Sum_probs=80.6

Q ss_pred             HHHHHHHHHHHHHHHHHccCCccceeecchhhHHHHHHHHHHHHHHHHHHHHHhhccCCceeeeechhHHHHHHHHHHHH
Q 019311          195 WICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTI  274 (343)
Q Consensus       195 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~  274 (343)
                      +++..+.+....+...... ..+.+.......+...+..|++....++.++.++.++.++ .++++..++|+++.+++++
T Consensus         3 ~r~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    3 FRYLFSVLFLLIILLIRGR-LRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHcc-HHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHH
Confidence            5566666666666654332 1111221122344555666776566899999999999995 8889999999999999999


Q ss_pred             HhccccchhhHHHHHHHHHhhhhhhccCc
Q 019311          275 ILAEQMYLGRIIGAIIIIGGLYLVVWGKS  303 (343)
Q Consensus       275 ~~~e~~~~~~~iG~~li~~G~~l~~~~~~  303 (343)
                      +++|+++..+++|++++++|+.+..+.+.
T Consensus        81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~  109 (113)
T PF13536_consen   81 FFKERLSPRRWLAILLILIGVILIAWSDL  109 (113)
T ss_pred             HhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence            99999999999999999999999987543

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.87  E-value=5.4e-08  Score=87.27  Aligned_cols=130  Identities=12%  Similarity=0.039  Sum_probs=97.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHHccCCccceeecchhhHHHHHHHHHHHHH
Q 019311          160 KGALMITAGCFSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSG  239 (343)
Q Consensus       160 ~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  239 (343)
                      .+.+++++++++|+...+..|...+..+ |....++++..+.+++.++..   .   ...+..   .+.. ...+.+...
T Consensus         4 ~~~l~~l~a~~~Wg~~~~~~k~~~~~~~-P~~~~~~R~~~a~l~l~~~~~---~---~~~~~~---~~~~-~~~~~l~~~   72 (295)
T PRK11689          4 KATLIGLIAILLWSTMVGLIRGVSESLG-PVGGAAMIYSVSGLLLLLTVG---F---PRLRQF---PKRY-LLAGGLLFV   72 (295)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHccCC-hHHHHHHHHHHHHHHHHHHcc---c---cccccc---cHHH-HHHHhHHHH
Confidence            4577899999999999999999888876 899999999999888776531   1   111111   1112 222333334


Q ss_pred             HHHHHHHHhh----ccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhc
Q 019311          240 LTYYIQGIVM----KDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVW  300 (343)
Q Consensus       240 ~~~~l~~~a~----~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~  300 (343)
                      ....+++.++    +..++..++++.++.|+++.++++++++|++++.+++|+++.++|+.+...
T Consensus        73 ~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~  137 (295)
T PRK11689         73 SYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLG  137 (295)
T ss_pred             HHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheec
Confidence            4444455555    456777888999999999999999999999999999999999999988764

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.86  E-value=5.5e-08  Score=87.43  Aligned_cols=125  Identities=10%  Similarity=0.105  Sum_probs=96.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHHccCCccceeecchhhHHHHHHHHHHHHHHHH
Q 019311          163 LMITAGCFSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGLTY  242 (343)
Q Consensus       163 ~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  242 (343)
                      +++++++++|+...+..|...++.+ |....++++..+++...++..   . .  ..      .+..+...|++.....+
T Consensus         7 l~~l~~~~~Wg~~~~~~k~~~~~~~-p~~~~~~R~~~a~~~l~~~~~---~-~--~~------~~~~~~~~g~~~~~~~~   73 (299)
T PRK11453          7 VLALLVVVVWGLNFVVIKVGLHNMP-PLMLAGLRFMLVAFPAIFFVA---R-P--KV------PLNLLLGYGLTISFGQF   73 (299)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHHHhc---C-C--CC------chHHHHHHHHHHHHHHH
Confidence            5688899999999999999888765 899999999987766554431   1 1  11      11223333444344455


Q ss_pred             HHHHHhhcc-CCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhc
Q 019311          243 YIQGIVMKD-RGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVW  300 (343)
Q Consensus       243 ~l~~~a~~~-~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~  300 (343)
                      .+++.+.++ .+++.++++.++.|+++.++++++++|+++..+++|+++.++|+.+...
T Consensus        74 ~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~  132 (299)
T PRK11453         74 AFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIE  132 (299)
T ss_pred             HHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhcc
Confidence            566778887 5778999999999999999999999999999999999999999988874

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.75  E-value=1.4e-07  Score=84.61  Aligned_cols=120  Identities=17%  Similarity=0.171  Sum_probs=95.2

Q ss_pred             cchhhhhhhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHH
Q 019311            2 DVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLEPVIDQNLYFIGMKYTTATFAA   81 (343)
Q Consensus         2 ~~~~k~~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~   81 (343)
                      .++.|.. .++.+|...... ..++.+++.++......  ....++..+...+..|++...+++.++++++++.+++.++
T Consensus       164 ~v~~r~~-~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as  239 (293)
T PRK10532        164 ILSGQRA-GAEHGPATVAIG-SLIAALIFVPIGALQAG--EALWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFG  239 (293)
T ss_pred             HHHHHHH-hccCCchHHHHH-HHHHHHHHHHHHHHccC--cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHH
Confidence            3456777 455778777554 45666666676654322  2223456666667888888899999999999999999999


Q ss_pred             HHhchhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhheeec
Q 019311           82 AMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIK  131 (343)
Q Consensus        82 ~i~~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~~~  131 (343)
                      ++.++.|+++.++++++++|+++..+      ++|..+.++|++......
T Consensus       240 ~~~~l~Pv~a~l~~~l~lgE~~~~~~------~iG~~lIl~~~~~~~~~~  283 (293)
T PRK10532        240 TLMSMEPALAAVSGMIFLGETLTLIQ------WLALGAIIAASMGSTLTI  283 (293)
T ss_pred             HHHHhHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999998      999999999999987443

>PRK13499 rhamnose-proton symporter; Provisional

Probab=98.74  E-value=4.9e-06  Score=74.95  Aligned_cols=243  Identities=14%  Similarity=0.119  Sum_probs=152.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHh-chhHHHHHHHHHHHhhccc---cccccccchhhHHHHHH
Q 019311           45 MTLAILTKLLLLGLLEPVIDQNLYFIGMKYTTATFAAAMY-NILPAITFLMAWIIRLENV---NLKSIRSLAKVIGTLAT  120 (343)
Q Consensus        45 ~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~p~~~~lla~~~~~e~~---~~~~~~~~~k~~~~~i~  120 (343)
                      .+.+.+...++.|++= ...+..++.++++...+.+..+. .+.-+...++..++++|-.   +..+  +..-.+|++++
T Consensus        68 ~~~~~~~~~~l~G~~W-~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~--g~~~~~gv~li  144 (345)
T PRK13499         68 FSGSTLLPVFLFGALW-GIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNG--GRMTLLGVLVA  144 (345)
T ss_pred             cCHHHHHHHHHHHHHH-HhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccch--HHHHHHHHHHH
Confidence            4567778888888887 89999999999999999998888 8999999999999998754   2211  22237888999


Q ss_pred             HhhhhhheeecCcccccccccCCCCCCCCCCCCCccchhHHHHHHHHHHHHHHHHH-------HHHHHHHhhCCchhHHH
Q 019311          121 VAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIKGALMITAGCFSWSFFI-------ILQAITLKAYPAELSLT  193 (343)
Q Consensus       121 ~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~-------i~~k~~~~~~~~~~~~~  193 (343)
                      ++|+.+........+       +.   ++.+..+..+..+|..+++++++.++.|.       ...+...+..-++....
T Consensus       145 liGi~l~s~Ag~~k~-------~~---~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~  214 (345)
T PRK13499        145 LIGVAIVGRAGQLKE-------RK---MGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAA  214 (345)
T ss_pred             HHHHHHHHHhhhhcc-------cc---cccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHH
Confidence            999999885222110       00   00000223567799999999999999999       43333222111333333


Q ss_pred             HHHHH---HH-HHHHHHHHHHHccCCcc--ce--eecchhhHHHH----HHHHHHHHHHHHHHHHHhhccCCceeeee--
Q 019311          194 AWICF---FG-TVEGTLAALIMERGKAS--IW--AIHWDTKLVAS----VYSGIICSGLTYYIQGIVMKDRGPVFVAA--  259 (343)
Q Consensus       194 ~~~~~---~~-~i~~~~~~~~~~~~~~~--~~--~~~~~~~~~~l----~~~~~~~~~~~~~l~~~a~~~~~~~~~s~--  259 (343)
                      .-+..   .+ .+....+.......+..  ..  ...+...+..-    ...|++ -.+++.++..+.++.+......  
T Consensus       215 lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~-W~~~~~~y~~~~~~~g~~~~~~sw  293 (345)
T PRK13499        215 LPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVM-WYLQFFFYAMGHSKLGAQYDFVSW  293 (345)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCCccchHHH
Confidence            33332   22 22222222221110111  01  11111112222    333443 5677778888888876654444  


Q ss_pred             -ch-hHHHHHHHHHHHHHhccccc------hhhHHHHHHHHHhhhhhhccC
Q 019311          260 -FS-PLCMVIVAIMSTIILAEQMY------LGRIIGAIIIIGGLYLVVWGK  302 (343)
Q Consensus       260 -~~-~~~pv~~~ll~~~~~~e~~~------~~~~iG~~li~~G~~l~~~~~  302 (343)
                       +. .+..+++.+++. +++|.=+      ...++|.+++++|..+....+
T Consensus       294 ~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~~  343 (345)
T PRK13499        294 MLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLGN  343 (345)
T ss_pred             HHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhcc
Confidence             44 777899999998 5998655      557999999999998886653

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.74  E-value=3.4e-07  Score=84.02  Aligned_cols=136  Identities=17%  Similarity=0.137  Sum_probs=101.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHHccCCccceeecchhhHHHHHHHHHHHHHHH
Q 019311          162 ALMITAGCFSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGLT  241 (343)
Q Consensus       162 ~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  241 (343)
                      ..+.+.-=.+...+++.+|...+..+-|+.++.+++.++.+...++.. ......+... .....+..++..|++ ....
T Consensus        51 ~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~-~~~~~~~~~~-~~~~~~~~llp~gl~-~~~~  127 (350)
T PTZ00343         51 ALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWA-TGFRKIPRIK-SLKLFLKNFLPQGLC-HLFV  127 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCCCC-CHHHHHHHHHHHHHH-HHHH
Confidence            333333344445567788999988865899999999999876555432 2110111111 122356677777886 4555


Q ss_pred             HHHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhc
Q 019311          242 YYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVW  300 (343)
Q Consensus       242 ~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~  300 (343)
                      +...+.++++.+++.++++..++|++++++++++++|+++..++.|++++++|+.+...
T Consensus       128 ~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~  186 (350)
T PTZ00343        128 HFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASV  186 (350)
T ss_pred             HHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheec
Confidence            77778999999999999999999999999999999999999999999999999998763

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.69  E-value=2.8e-07  Score=83.01  Aligned_cols=122  Identities=14%  Similarity=0.127  Sum_probs=96.8

Q ss_pred             HHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHHccCCccceeecchhhHHHHHHHHHHHHHHHHHHHHHhhccC
Q 019311          173 SFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGLTYYIQGIVMKDR  252 (343)
Q Consensus       173 a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~  252 (343)
                      ..+++.+|...+..+.|....++++..+.+...+... ........   .+..++..++..|++ .+..+.+.+.+++++
T Consensus        15 ~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~g~~-~~~~~~~~~~~l~~~   89 (302)
T TIGR00817        15 VYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWS-SGLPKRLK---ISSALLKLLLPVAIV-HTIGHVTSNVSLSKV   89 (302)
T ss_pred             HHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCC---CCHHHHHHHHHHHHH-HHHHHHHHHHHHHhc
Confidence            3455678988887677899999999888766554421 11101111   234467777888887 678889999999999


Q ss_pred             CceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhh
Q 019311          253 GPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVV  299 (343)
Q Consensus       253 ~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~  299 (343)
                      +++..+++..+.|+++.++++++++|+++..+++|.+++++|+.+..
T Consensus        90 s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~  136 (302)
T TIGR00817        90 AVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS  136 (302)
T ss_pred             cHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc
Confidence            99999999999999999999999999999999999999999997653

specificities overlap.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.65  E-value=4.2e-07  Score=78.22  Aligned_cols=141  Identities=11%  Similarity=0.188  Sum_probs=114.9

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHHccCCcccee-ecchhhHHHHHHHHH
Q 019311          157 NSIKGALMITAGCFSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWA-IHWDTKLVASVYSGI  235 (343)
Q Consensus       157 ~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~  235 (343)
                      +...|.++++.+-+.|+..-...|-+ +..+ +..+..++.+.+...+........+ ....+. ...+..+......++
T Consensus         4 ~~~~Gil~~l~Ay~lwG~lp~y~kll-~~~~-~~eIlahRviwS~~~~l~ll~~~r~-~~~~~~~~~~p~~~~~~~l~a~   80 (293)
T COG2962           4 DSRKGILLALLAYLLWGLLPLYFKLL-EPLP-ATEILAHRVIWSFPFMLALLFLLRQ-WRELKQLLKQPKTLLMLALTAL   80 (293)
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHHH-ccCC-HHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHhCcHHHHHHHHHHH
Confidence            45689999999999999998877764 5555 6899999999999888877776544 212222 234445666666666


Q ss_pred             HHHHHHHHHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhcc
Q 019311          236 ICSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWG  301 (343)
Q Consensus       236 ~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~  301 (343)
                      . ...-..++.+|.++-....++.-.+.+|.+.+++|.++++|+++..|++.+++..+|+....+.
T Consensus        81 l-i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~  145 (293)
T COG2962          81 L-IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWL  145 (293)
T ss_pred             H-HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence            5 7888999999999999999999999999999999999999999999999999999999877653

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.60  E-value=3.6e-07  Score=68.99  Aligned_cols=68  Identities=19%  Similarity=0.271  Sum_probs=62.3

Q ss_pred             HHHHHHHHHHHHHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhh
Q 019311          232 YSGIICSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVV  299 (343)
Q Consensus       232 ~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~  299 (343)
                      ..++++.+.++.++..++++.|.+.+-.+.++.++++.+++++++||++++.+++|++++++|+.+..
T Consensus        41 ~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         41 GLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            33446678899999999999999999999999999999999999999999999999999999998764

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.58  E-value=4.6e-07  Score=68.43  Aligned_cols=70  Identities=17%  Similarity=0.142  Sum_probs=63.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccchhHHHHHhchhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhhe
Q 019311           53 LLLLGLLEPVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMT  128 (343)
Q Consensus        53 ~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~  128 (343)
                      ....+++.+.+++.++..+++..|.+.+..+.++.++++.+++++++|||++.++      ++|+.++++|+.++.
T Consensus        39 ~~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~------~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         39 WLGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRH------WCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHh
Confidence            3444446668899999999999999999999999999999999999999999997      999999999998875

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.47  E-value=4.6e-06  Score=74.30  Aligned_cols=142  Identities=14%  Similarity=0.224  Sum_probs=104.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHHccCCccceeecchhhHHHHHHHHHHH
Q 019311          158 SIKGALMITAGCFSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIIC  237 (343)
Q Consensus       158 ~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  237 (343)
                      ...+....+..++.|+......|...+...+.......+...+.+...+.... +  ......  ....+......+.+.
T Consensus         5 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~--~~~~~~~~~~~~~~~   79 (292)
T COG0697           5 LLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLL-E--PRGLRP--ALRPWLLLLLLALLG   79 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHh-h--cccccc--cccchHHHHHHHHHH
Confidence            45677888888899999999988877752334454455666666552222221 1  000111  111234555666667


Q ss_pred             HHHHHHHHHHhhccCCceeeeechhHHHHHHHHHHH-HHhccccchhhHHHHHHHHHhhhhhhccCcc
Q 019311          238 SGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMST-IILAEQMYLGRIIGAIIIIGGLYLVVWGKSK  304 (343)
Q Consensus       238 ~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~-~~~~e~~~~~~~iG~~li~~G~~l~~~~~~~  304 (343)
                      ....+.+++.++++.++..++.+.++.|+++.++++ ++++|+++..++.|..+.+.|+++..+....
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~  147 (292)
T COG0697          80 LALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGG  147 (292)
T ss_pred             HHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCc
Confidence            899999999999999999999999999999999997 6669999999999999999999999875543

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=98.42  E-value=8.3e-07  Score=77.28  Aligned_cols=229  Identities=14%  Similarity=0.189  Sum_probs=133.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhchhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhheeec
Q 019311           52 KLLLLGLLEPVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIK  131 (343)
Q Consensus        52 ~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~~~  131 (343)
                      +....|++.+.++..+-|.|+.+.|++..+.+..++.+..++++..+++||++...      .+|+.++++|..+++.. 
T Consensus        65 ~~Ww~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g------~lGc~l~v~Gst~iV~h-  137 (335)
T KOG2922|consen   65 PLWWAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLG------ILGCVLCVVGSTTIVIH-  137 (335)
T ss_pred             HHHHHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhh------hhheeEEecccEEEEEe-
Confidence            44556777778888888999999999999999999999999999999999999999      99999999999888843 


Q ss_pred             CcccccccccCCCCCCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHH-------
Q 019311          132 GPILELFWTKGAENHGHGSSGTTTHNSIKGALMITAGCFSWSFFIILQAITLKAYPAELSLTAWICFFGTVEG-------  204 (343)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~-------  204 (343)
                      .|.++...+..+..+     --.+...+. ....+...++.=.+  ..+   +++. ...+..+..+.+.+-.       
T Consensus       138 aP~e~~i~t~~el~~-----~~~~~~Fli-y~~~iil~~~il~~--~~~---p~~g-~tnilvyi~i~s~iGS~tV~svK  205 (335)
T KOG2922|consen  138 APKEQEIESVEEVWE-----LATEPGFLV-YVIIIILIVLILIF--FYA---PRYG-QTNILVYIGICSLIGSLTVMSVK  205 (335)
T ss_pred             cCcccccccHHHHHH-----HhcCccHHH-HHHHHHHHHHHHhe--eec---cccc-ccceeehhhHhhhhcceeeeeHH
Confidence            321100000000000     000001111 11111111111111  111   1111 1112223333333211       


Q ss_pred             ---HHHHHHHccCCccceeecchhhHHHHHHHHHHHHHHHHHHHHHhhccCCceeeeechhH-HHHHHHHHHHHHhcccc
Q 019311          205 ---TLAALIMERGKASIWAIHWDTKLVASVYSGIICSGLTYYIQGIVMKDRGPVFVAAFSPL-CMVIVAIMSTIILAEQM  280 (343)
Q Consensus       205 ---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~-~pv~~~ll~~~~~~e~~  280 (343)
                         ..+-....+    ......+..|..++.... +...-..-.++|++..+++.++++.+. -..++++-+.++|+|--
T Consensus       206 alg~aiklt~~g----~~ql~~~~ty~~~l~~~~-~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~  280 (335)
T KOG2922|consen  206 ALGIAIKLTFSG----NNQLFYPLTWIFLLVVAT-CVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWS  280 (335)
T ss_pred             HHHHHHHHHhcC----CcccccHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhc
Confidence               111111111    112223335555555444 344455556889999999988877765 45566677888888853


Q ss_pred             c--h----hhHHHHHHHHHhhhhhhccCcc
Q 019311          281 Y--L----GRIIGAIIIIGGLYLVVWGKSK  304 (343)
Q Consensus       281 ~--~----~~~iG~~li~~G~~l~~~~~~~  304 (343)
                      .  .    ....|...++.|+++....+.+
T Consensus       281 ~~~~~~i~~~~~Gf~ti~~G~flL~~~kd~  310 (335)
T KOG2922|consen  281 GQDALDIAGELCGFVTIFLGIFLLHRTKDM  310 (335)
T ss_pred             CCcHHHHHHHHHhHHHhhheeeEeeeeccc
Confidence            3  2    2678888999999888554433

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=98.40  E-value=8.9e-06  Score=73.29  Aligned_cols=145  Identities=13%  Similarity=0.035  Sum_probs=104.5

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHhh-CCchhHHHHHHHHHHHHHHHHHHHHHccCCccceeecchhhHHHHHHHHH
Q 019311          157 NSIKGALMITAGCFSWSFFIILQAITLKA-YPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGI  235 (343)
Q Consensus       157 ~~~~G~~~~l~a~~~~a~~~i~~k~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  235 (343)
                      +.+.+.+++-.-+++-+...+.+..+.++ ...|...+++.+..-.++..+....-.  ....+.......|+..+.+++
T Consensus        10 ~~~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~--~~~~~~~~~~~~~w~y~lla~   87 (334)
T PF06027_consen   10 RFWIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRR--GFKKWLKVLKRPWWKYFLLAL   87 (334)
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhcc--ccccchhhcchhHHHHHHHHH
Confidence            34455555555566666666666665555 224666666666665555555443322  222222222345666666777


Q ss_pred             HHHHHHHHHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhccCcc
Q 019311          236 ICSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWGKSK  304 (343)
Q Consensus       236 ~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~~~~  304 (343)
                      + -..+.++...|.++++.+.++++.....+++.+++++++++++++.+++|+++.++|+.+.......
T Consensus        88 ~-Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~  155 (334)
T PF06027_consen   88 L-DVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVL  155 (334)
T ss_pred             H-HHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeeccc
Confidence            5 8899999999999999999999999999999999999999999999999999999999988776543

Some of the sequences in this family are annotated as putative membrane proteins.

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.34  E-value=8.9e-06  Score=65.35  Aligned_cols=108  Identities=20%  Similarity=0.327  Sum_probs=92.1

Q ss_pred             CCChhHHHHHHHHHHHHHHHHHHHHhccCCCCC----C-------CHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHH
Q 019311           12 GMSPYVLVVYRHAAATIAMAPFAVILDKKIRPK----M-------TLAILTKLLLLGLLEPVIDQNLYFIGMKYTTATFA   80 (343)
Q Consensus        12 ~~~p~~~~~~r~~~~~~~~~~~~~~~~~~~~~~----~-------~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~   80 (343)
                      +.++.++.......+.+++++.....++....+    .       +.+.+...+..|++. ...+.+.+..++++++-..
T Consensus        32 ~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~n~~~f~~i~~tS~lt~  110 (153)
T PF03151_consen   32 KLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSGLLA-FLYNLSSFLLIKLTSPLTY  110 (153)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHHHHH-HHHHHHHHHHhhhcChhHH
Confidence            689999999999999999999988766554111    0       224455667777777 8889999999999999999


Q ss_pred             HHHhchhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhh
Q 019311           81 AAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMV  126 (343)
Q Consensus        81 ~~i~~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~l  126 (343)
                      +++.....+.+.++++++++|+++..+      ++|+.++++|+.+
T Consensus       111 ~v~~~~K~~~~i~~s~~~f~~~~t~~~------~~G~~l~~~G~~~  150 (153)
T PF03151_consen  111 SVLGNVKRILVILLSVIFFGEPITPLQ------IIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHHHHHHHHHHhhhcCCcCCHHH------HHHHHHHHHHHhe
Confidence            999999999999999999999999997      9999999999875

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.29  E-value=9.9e-06  Score=72.40  Aligned_cols=131  Identities=18%  Similarity=0.169  Sum_probs=94.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHHccCCccceeecchhhHHHHHHHHHHHHHH
Q 019311          161 GALMITAGCFSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGL  240 (343)
Q Consensus       161 G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  240 (343)
                      +.+++++++++|+...+..|+.. ..+ +.+..  ....+.++...+...... .  ..  .....+..-...|. .-.+
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~-g~~-~~~~~--~~~~g~l~~~~~~~~~~~-~--~~--~~~~~~~~g~l~G~-~w~i   71 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG-GGP-YSQTL--GTTFGALILSIAIAIFVL-P--EF--WALSIFLVGLLSGA-FWAL   71 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC-CCH-HHHHH--HHHHHHHHHHHHHHHHhC-C--cc--cccHHHHHHHHHHH-HHHh
Confidence            56889999999999999988864 333 33332  344444444444333222 1  11  11223333333344 3788


Q ss_pred             HHHHHHHhhccCCceeeeechh-HHHHHHHHHHHHHhccccchhh----HHHHHHHHHhhhhhhcc
Q 019311          241 TYYIQGIVMKDRGPVFVAAFSP-LCMVIVAIMSTIILAEQMYLGR----IIGAIIIIGGLYLVVWG  301 (343)
Q Consensus       241 ~~~l~~~a~~~~~~~~~s~~~~-~~pv~~~ll~~~~~~e~~~~~~----~iG~~li~~G~~l~~~~  301 (343)
                      ++.+++.+.++.+.+.+..+.+ ++++++.+++.+++||+.+..+    ++|.+++++|+++....
T Consensus        72 g~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~  137 (290)
T TIGR00776        72 GQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRS  137 (290)
T ss_pred             hhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEec
Confidence            8999999999999999988888 9999999999999999999999    99999999998887554

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=98.27  E-value=4.1e-07  Score=76.91  Aligned_cols=137  Identities=12%  Similarity=0.096  Sum_probs=102.0

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHHccCCccceeecchhhHHHHHHHHHH
Q 019311          157 NSIKGALMITAGCFSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGII  236 (343)
Q Consensus       157 ~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  236 (343)
                      ...+|..+..++ ..+....+..++.....  |......++++-.++..|..++...     +...++..-.+++.=|+.
T Consensus        35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~e~~--p~e~a~~r~l~~mlit~pcliy~~~-----~v~gp~g~R~~LiLRg~m  106 (346)
T KOG4510|consen   35 KPNLGLLLLTVS-YFFNSCMVVSTKVLEND--PMELASFRLLVRMLITYPCLIYYMQ-----PVIGPEGKRKWLILRGFM  106 (346)
T ss_pred             CCccCceehhhH-HHHhhHHHhhhhhhccC--hhHhhhhhhhhehhhhheEEEEEee-----eeecCCCcEEEEEeehhh
Confidence            456888898888 77888888888877763  5666666666655555554443222     111222222233334444


Q ss_pred             HHHHHHHHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhccC
Q 019311          237 CSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWGK  302 (343)
Q Consensus       237 ~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~~  302 (343)
                       +..+..+.++++++.+.+.+.++....|+++.+++|++++|+.+....+|..+.+.|+++..+..
T Consensus       107 -G~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPp  171 (346)
T KOG4510|consen  107 -GFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPP  171 (346)
T ss_pred             -hhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCC
Confidence             56677888999999999999999999999999999999999999999999999999999998653

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=98.16  E-value=1e-05  Score=61.45  Aligned_cols=69  Identities=17%  Similarity=0.363  Sum_probs=59.3

Q ss_pred             HHHHHHHHHHHHHHhhccCCceeeeec-hhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhccC
Q 019311          234 GIICSGLTYYIQGIVMKDRGPVFVAAF-SPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWGK  302 (343)
Q Consensus       234 ~~~~~~~~~~l~~~a~~~~~~~~~s~~-~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~~  302 (343)
                      .+.+.+++++++..++++.+.+.+=.+ ..+..+.+.++++++++|++++.+++|+++|++|++......
T Consensus        36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            444578899999999999998865444 578899999999999999999999999999999999886544

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=98.14  E-value=5.7e-07  Score=75.18  Aligned_cols=251  Identities=16%  Similarity=0.158  Sum_probs=166.4

Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHh-chhHHHHH
Q 019311           14 SPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLEPVIDQNLYFIGMKYTTATFAAAMY-NILPAITF   92 (343)
Q Consensus        14 ~p~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~p~~~~   92 (343)
                      .|.+-+.- ..++++.+....++..   .|..+.+.+...++.|.+= ...+...+.|+++.+.+.+..+. .++-+-+.
T Consensus        27 ~p~qQ~lG-tT~GALifaiiv~~~~---~p~~T~~~~iv~~isG~~W-s~GQ~~Qfka~~~iGVSkamPiStG~QLVg~s  101 (288)
T COG4975          27 KPYQQTLG-TTLGALIFAIIVFLFV---SPELTLTIFIVGFISGAFW-SFGQANQFKAIQLIGVSKAMPISTGMQLVGTS  101 (288)
T ss_pred             ChhHhhhh-ccHHHHHHHHHHheee---cCccchhhHHHHHHhhhHh-hhhhhhhhhheeeeeeeccccccchhhHhhce
Confidence            45554444 3344444444444332   3445667677777777776 88899999999999999999998 78899999


Q ss_pred             HHHHHHhhccccccccccchhhH---HHHHHHhhhhhheeecCcccccccccCCCCCCCCCCCCCccchhHHHHHHHHHH
Q 019311           93 LMAWIIRLENVNLKSIRSLAKVI---GTLATVAGAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIKGALMITAGC  169 (343)
Q Consensus        93 lla~~~~~e~~~~~~~~~~~k~~---~~~i~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~  169 (343)
                      +++.+.++|..+..+     +++   ++++.++|+.+-...+.+           +    ....+.++..+|....+.+.
T Consensus       102 L~gV~~f~EW~t~~~-----~IlG~iAliliviG~~lTs~~~~~-----------n----k~~~~~~n~kkgi~~L~iSt  161 (288)
T COG4975         102 LFGVFVFHEWTTPTQ-----IILGFIALILIVIGIYLTSKQDRN-----------N----KEEENPSNLKKGIVILLIST  161 (288)
T ss_pred             eeeEEEEeccCcchh-----HHHHHHHHHHHHHhheEeeeeccc-----------c----ccccChHhhhhheeeeeeec
Confidence            999999999998876     333   345556666665533221           0    01123345668999999999


Q ss_pred             HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHHccCCccceeecchhhHHHHHHHHHHHHHHHHHHHHHhh
Q 019311          170 FSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGLTYYIQGIVM  249 (343)
Q Consensus       170 ~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~  249 (343)
                      +.|-.|.+..+...  . +-+....-+.....+..+.+... .    .+ ...+. ..+.-..-|++ -+++...+..+.
T Consensus       162 ~GYv~yvvl~~~f~--v-~g~saiLPqAiGMv~~ali~~~~-~----~~-~~~~K-~t~~nii~G~~-Wa~GNl~ml~a~  230 (288)
T COG4975         162 LGYVGYVVLFQLFD--V-DGLSAILPQAIGMVIGALILGFF-K----ME-KRFNK-YTWLNIIPGLI-WAIGNLFMLLAA  230 (288)
T ss_pred             cceeeeEeeecccc--c-cchhhhhHHHHHHHHHHHHHhhc-c----cc-cchHH-HHHHHHhhHHH-HHhhHHHHHHhh
Confidence            99999998766543  2 22333333333322222223321 1    11 11122 33344455665 577888899999


Q ss_pred             ccCCceeeeechhHHHHHHHHHHHHHhccccchh----hHHHHHHHHHhhhhhhc
Q 019311          250 KDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLG----RIIGAIIIIGGLYLVVW  300 (343)
Q Consensus       250 ~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~----~~iG~~li~~G~~l~~~  300 (343)
                      ++.+.++.=.+.-+..+++.+-+.++++|+=+..    .++|.+++++|..+...
T Consensus       231 ~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg~  285 (288)
T COG4975         231 QKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLGI  285 (288)
T ss_pred             hhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhhe
Confidence            9999999888899999999999999999987766    45788888888776643

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=98.14  E-value=4.6e-05  Score=68.63  Aligned_cols=131  Identities=15%  Similarity=0.079  Sum_probs=97.7

Q ss_pred             HHHHHHHHHHHHHhhCC-c--hhHHHHHHHHHHHHHHHHHHHHHccCCccceeecchhhHHHHHHHHHHHHHHHHHHHHH
Q 019311          171 SWSFFIILQAITLKAYP-A--ELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGLTYYIQGI  247 (343)
Q Consensus       171 ~~a~~~i~~k~~~~~~~-~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~  247 (343)
                      ++..+.+.+++..++.. .  |..+++.++....+...+.......   ...   +...+...+..+++ ..++..+.+.
T Consensus        11 ~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~-~~~~~~~~~~   83 (303)
T PF08449_consen   11 GCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKF---PKS---RKIPLKKYAILSFL-FFLASVLSNA   83 (303)
T ss_pred             HHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccc---cCC---CcChHHHHHHHHHH-HHHHHHHHHH
Confidence            33446677777776543 3  6788888888877776666553331   111   11233344455554 7778889999


Q ss_pred             hhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhccCccCCCC
Q 019311          248 VMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWGKSKDHKS  308 (343)
Q Consensus       248 a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~~~~~~~~  308 (343)
                      ++++++.....+.....|+.+.++++++++++.+..++++++++.+|+.+....+.++.++
T Consensus        84 al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~  144 (303)
T PF08449_consen   84 ALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSS  144 (303)
T ss_pred             HHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccc
Confidence            9999999999999999999999999999999999999999999999999998766544443

; GO: 0055085 transmembrane transport

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.10  E-value=1.9e-05  Score=61.20  Aligned_cols=71  Identities=21%  Similarity=0.343  Sum_probs=65.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccchhHHHHHhchhHHHHHHHHHH--HhhccccccccccchhhHHHHHHHhhhhhhee
Q 019311           53 LLLLGLLEPVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWI--IRLENVNLKSIRSLAKVIGTLATVAGAMVMTL  129 (343)
Q Consensus        53 ~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lla~~--~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~  129 (343)
                      .+..|+..+.+++.++..+++..+.+.+..+.+..++++.+.++.  ++||+++..+      ++|+.+.++|+.++..
T Consensus        50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~------~iGi~lIi~GV~lv~~  122 (129)
T PRK02971         50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKK------TLGVACIMLGVWLINL  122 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHhcc
Confidence            577888888999999999999999999999999999888888885  8999999997      9999999999999873

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.98  E-value=2.7e-05  Score=58.45  Aligned_cols=68  Identities=19%  Similarity=0.364  Sum_probs=58.6

Q ss_pred             HHHHHHHHHHHHHhhccCCceee-eechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhccC
Q 019311          235 IICSGLTYYIQGIVMKDRGPVFV-AAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWGK  302 (343)
Q Consensus       235 ~~~~~~~~~l~~~a~~~~~~~~~-s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~~  302 (343)
                      +++.+++++++..++++.|.+.+ ++...+..+.+.++++++|+|++++.+++|++++++|++.....+
T Consensus        37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            44578899999999999998764 444668889999999999999999999999999999999986543

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.95  E-value=0.00016  Score=56.77  Aligned_cols=132  Identities=16%  Similarity=0.091  Sum_probs=97.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHHccCCccceeecchhhHHHHHHHHHHHHHH
Q 019311          161 GALMITAGCFSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGL  240 (343)
Q Consensus       161 G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  240 (343)
                      ..+++++++++-+.....+.++.++..+|....+..+..+++.+..+.++.+..   .........|+.  ++|.+.+..
T Consensus         2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~---~~~~~~~~p~w~--~lGG~lG~~   76 (138)
T PF04657_consen    2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP---SLASLSSVPWWA--YLGGLLGVF   76 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc---ccchhccCChHH--hccHHHHHH
Confidence            357889999999999999999999887789999999999999988888776652   222111112222  224444777


Q ss_pred             HHHHHHHhhccCCceeeee-chhHHHHHHHHHHHH----HhccccchhhHHHHHHHHHhhhh
Q 019311          241 TYYIQGIVMKDRGPVFVAA-FSPLCMVIVAIMSTI----ILAEQMYLGRIIGAIIIIGGLYL  297 (343)
Q Consensus       241 ~~~l~~~a~~~~~~~~~s~-~~~~~pv~~~ll~~~----~~~e~~~~~~~iG~~li~~G~~l  297 (343)
                      ...+.....++.+++.... ...-|.+.+.+++.+    .-++++++.+++|.+++++|+++
T Consensus        77 ~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   77 FVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            7778888899999876554 445567777777875    23567999999999999999864

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.93  E-value=5e-05  Score=67.89  Aligned_cols=122  Identities=20%  Similarity=0.171  Sum_probs=90.2

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHHccCCccceeecchhhHHHHHHHHHH
Q 019311          157 NSIKGALMITAGCFSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGII  236 (343)
Q Consensus       157 ~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  236 (343)
                      ++..|..+++.++++.+....++|+...+.+. ...-.-..        ....           ..++ .|+.    |.+
T Consensus         4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~-~~~~~~~~--------~~~~-----------l~~~-~W~~----G~~   58 (300)
T PF05653_consen    4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPR-GSLRAGSG--------GRSY-----------LRRP-LWWI----GLL   58 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccccccch--------hhHH-----------HhhH-HHHH----HHH
Confidence            56789999999999999999999997776542 00000000        0000           0011 2222    233


Q ss_pred             HHHHHHHHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhccCc
Q 019311          237 CSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWGKS  303 (343)
Q Consensus       237 ~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~~~  303 (343)
                      ...++..+.+.|+...|++.++++..+..++..+++..+++|+++..+++|+++++.|..+......
T Consensus        59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~  125 (300)
T PF05653_consen   59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAP  125 (300)
T ss_pred             HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCC
Confidence            3455667778899999999999999999999999999999999999999999999999887765443

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.82  E-value=0.00046  Score=51.57  Aligned_cols=65  Identities=22%  Similarity=0.248  Sum_probs=57.6

Q ss_pred             HHHHHHHHHHHHHhhcccchhHHHHHh-chhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhhe
Q 019311           58 LLEPVIDQNLYFIGMKYTTATFAAAMY-NILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMT  128 (343)
Q Consensus        58 ~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~  128 (343)
                      +..+.+++.+...+++..|.+.+-.+. ....+.+.+++++++||++++.+      ++++.+.++|++.+-
T Consensus        42 ~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~------~~gi~lIi~GVi~lk  107 (109)
T PRK10650         42 LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKG------WIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHhc
Confidence            333478899999999999999986666 79999999999999999999997      999999999998863

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=97.76  E-value=0.00025  Score=59.97  Aligned_cols=117  Identities=18%  Similarity=0.183  Sum_probs=94.1

Q ss_pred             hhhhhhhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHH
Q 019311            4 LCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLEPVIDQNLYFIGMKYTTATFAAAM   83 (343)
Q Consensus         4 ~~k~~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i   83 (343)
                      ..|.. .+..+.-.-+..-+.+++++.+|+-.....  ..-.++.-....+..+++...+.+.+-..+++..|.....++
T Consensus       166 ~G~r~-g~~~~g~~g~a~gm~vAaviv~Pig~~~ag--~~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~L  242 (292)
T COG5006         166 LGQRA-GRAEHGTAGVAVGMLVAALIVLPIGAAQAG--PALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTL  242 (292)
T ss_pred             Hcchh-cccCCCchHHHHHHHHHHHHHhhhhhhhcc--hhhcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHH
Confidence            34444 223455566677788888888888764222  233456667777888999999999999999999999999999


Q ss_pred             hchhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhhee
Q 019311           84 YNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTL  129 (343)
Q Consensus        84 ~~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~  129 (343)
                      .++.|.+.++.++++++|.++..|      |.++...+++..-..+
T Consensus       243 lSLePa~aAl~G~i~L~e~ls~~q------wlaI~~ViaAsaG~~l  282 (292)
T COG5006         243 LSLEPALAALSGLIFLGETLTLIQ------WLAIAAVIAASAGSTL  282 (292)
T ss_pred             HHhhHHHHHHHHHHHhcCCCCHHH------HHHHHHHHHHHhcccc
Confidence            999999999999999999999998      9999999888776554

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.71  E-value=0.00055  Score=50.33  Aligned_cols=67  Identities=19%  Similarity=0.193  Sum_probs=58.8

Q ss_pred             HHHHHHHHHHHHHHhhcccchhHHHHHh-chhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhhee
Q 019311           57 GLLEPVIDQNLYFIGMKYTTATFAAAMY-NILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTL  129 (343)
Q Consensus        57 g~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~  129 (343)
                      .+..+.+++.+.-.++++.|.+.+-.+. ..-.+.+.+.+++++||+++..+      ++++.+.++|++.+-.
T Consensus        36 ~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~------~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          36 TIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIK------LLGLALILAGVIGLKL  103 (106)
T ss_pred             HHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHH------HHHHHHHHHHHHHhhh
Confidence            3344478899999999999999886665 89999999999999999999996      9999999999998753

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.69  E-value=0.00022  Score=54.28  Aligned_cols=68  Identities=19%  Similarity=0.189  Sum_probs=60.6

Q ss_pred             HHHHHHHHHHHHHHHhhcccchhHHHHHh-chhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhhee
Q 019311           56 LGLLEPVIDQNLYFIGMKYTTATFAAAMY-NILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTL  129 (343)
Q Consensus        56 ~g~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~  129 (343)
                      ..+..+.+++.++..++++.|.+.+-.+. .+.-+.+.+++.++++|+++..+      ++|+.+.++|++.+-.
T Consensus        35 ~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~------~~gi~lIi~GVi~l~l  103 (120)
T PRK10452         35 LMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMK------IAGLTTLVAGIVLIKS  103 (120)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHhhc
Confidence            34444588999999999999999998776 79999999999999999999997      9999999999988864

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.65  E-value=0.00016  Score=53.66  Aligned_cols=66  Identities=17%  Similarity=0.189  Sum_probs=58.2

Q ss_pred             HHHHHHHHHHHHHhhccCCcee-eeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhc
Q 019311          235 IICSGLTYYIQGIVMKDRGPVF-VAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVW  300 (343)
Q Consensus       235 ~~~~~~~~~l~~~a~~~~~~~~-~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~  300 (343)
                      +.+..+++++...++|+.|... .++-..+..+.+.+.++++++|++++.+++|+.++++|++....
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            4457889999999999999864 57777788999999999999999999999999999999998754

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.64  E-value=0.00032  Score=52.11  Aligned_cols=65  Identities=15%  Similarity=0.129  Sum_probs=58.3

Q ss_pred             HHHHHHHHHHHHHhhcccchhHHHHHh-chhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhhe
Q 019311           58 LLEPVIDQNLYFIGMKYTTATFAAAMY-NILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMT  128 (343)
Q Consensus        58 ~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~  128 (343)
                      +..+..++.+...+++..|.+.+-.+. .+..+.+.+++++++||++++.+      ++++.+.++|++.+-
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~------~~gi~lIi~GVv~l~  101 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPAR------LLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHhhh
Confidence            444488899999999999999886666 79999999999999999999997      999999999999875

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.64  E-value=0.0011  Score=49.85  Aligned_cols=67  Identities=19%  Similarity=0.319  Sum_probs=60.0

Q ss_pred             HHHHHHHHHHHHHHhhcccchhHHHHHh-chhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhhee
Q 019311           57 GLLEPVIDQNLYFIGMKYTTATFAAAMY-NILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTL  129 (343)
Q Consensus        57 g~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~  129 (343)
                      .+..+.+++.++..+++..|.+.+-.+. .+.-+.+.+++++++||++++.+      ++|+.+.++|++++-.
T Consensus        36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~------~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPA------IIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHhc
Confidence            4555588899999999999999997775 79999999999999999999997      9999999999999864

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.63  E-value=0.00021  Score=61.97  Aligned_cols=79  Identities=13%  Similarity=0.254  Sum_probs=70.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhccCccC
Q 019311          226 KLVASVYSGIICSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWGKSKD  305 (343)
Q Consensus       226 ~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~~~~~  305 (343)
                      +.+....-+++ ..+...+.+.++++.+|+...++..+..++++++++++++.+++..||++..+.++|+.+........
T Consensus        16 ~~~~~~vPA~l-Y~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~   94 (244)
T PF04142_consen   16 DTLKLAVPALL-YAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS   94 (244)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence            45566666665 88889999999999999999999999999999999999999999999999999999999987765544

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.63  E-value=0.0011  Score=52.11  Aligned_cols=139  Identities=13%  Similarity=0.083  Sum_probs=96.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHHccCCccceeecchhhHHHHHHHHHHH
Q 019311          158 SIKGALMITAGCFSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIIC  237 (343)
Q Consensus       158 ~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  237 (343)
                      ..+..+.+++++++-......+.++.+..++|..-....+..+++.+..+.++.+.  ...+.......|+. ..-|++ 
T Consensus         3 ~~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~--~~~~a~~~~~pwW~-~~GG~l-   78 (150)
T COG3238           3 MYLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQG--HPGLAAVASAPWWA-WIGGLL-   78 (150)
T ss_pred             cHHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcC--CCchhhccCCchHH-HHccch-
Confidence            34677889999999999999999999988888888999999999888888877443  22222112212222 222332 


Q ss_pred             HHHHHHHHHHhhccCCce-eeeechhHHHHHHHHHHHHHhc----cccchhhHHHHHHHHHhhhhhhc
Q 019311          238 SGLTYYIQGIVMKDRGPV-FVAAFSPLCMVIVAIMSTIILA----EQMYLGRIIGAIIIIGGLYLVVW  300 (343)
Q Consensus       238 ~~~~~~l~~~a~~~~~~~-~~s~~~~~~pv~~~ll~~~~~~----e~~~~~~~iG~~li~~G~~l~~~  300 (343)
                      +.+-.........+.+++ .+.....-|.+.+.+++.+=+.    .+++..+++|++++++|+++..+
T Consensus        79 Ga~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~  146 (150)
T COG3238          79 GAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARR  146 (150)
T ss_pred             hhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcc
Confidence            444444455566677665 4556666777888888876543    57899999999999999665544

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.61  E-value=0.00023  Score=52.33  Aligned_cols=65  Identities=20%  Similarity=0.400  Sum_probs=58.0

Q ss_pred             HHHHHHHHHHHhhccCCce-eeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhcc
Q 019311          237 CSGLTYYIQGIVMKDRGPV-FVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWG  301 (343)
Q Consensus       237 ~~~~~~~l~~~a~~~~~~~-~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~  301 (343)
                      +..+++.+...++|+.|.. ..++..-.-.+.+.+.++++|+|+.++.+++|..++++|++.....
T Consensus        39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence            4677899999999999886 4678888899999999999999999999999999999999988654

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.58  E-value=0.001  Score=49.75  Aligned_cols=65  Identities=9%  Similarity=0.184  Sum_probs=56.9

Q ss_pred             HHHHHHHHHHHHHhhccCCcee-eeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhh
Q 019311          235 IICSGLTYYIQGIVMKDRGPVF-VAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVV  299 (343)
Q Consensus       235 ~~~~~~~~~l~~~a~~~~~~~~-~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~  299 (343)
                      +.+..+++++...++|+.|... .++...+..+.+.+.++++++|++++.+++|+++++.|++...
T Consensus        42 ~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         42 LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            3346889999999999999864 5677778889999999999999999999999999999998764

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.49  E-value=0.0022  Score=55.80  Aligned_cols=81  Identities=19%  Similarity=0.214  Sum_probs=65.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhccCCceeeeech-hHHHHHHHHHHHHHhccccchhhH----HHHHHHHHhhhhhhc
Q 019311          226 KLVASVYSGIICSGLTYYIQGIVMKDRGPVFVAAFS-PLCMVIVAIMSTIILAEQMYLGRI----IGAIIIIGGLYLVVW  300 (343)
Q Consensus       226 ~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~-~~~pv~~~ll~~~~~~e~~~~~~~----iG~~li~~G~~l~~~  300 (343)
                      .++.-+..|++ -.+++..++.+.++.+.+++.++. .++-+.+.++++++|||.-+..++    ++.+++++|+++..+
T Consensus        44 ~~~~~~lsG~~-W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~  122 (269)
T PF06800_consen   44 SFIVAFLSGAF-WAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY  122 (269)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence            45455555554 789999999999999999999887 677888999999999998776654    488899999999887


Q ss_pred             cCccCCC
Q 019311          301 GKSKDHK  307 (343)
Q Consensus       301 ~~~~~~~  307 (343)
                      .++++++
T Consensus       123 ~~~~~~~  129 (269)
T PF06800_consen  123 QDKKSDK  129 (269)
T ss_pred             ccccccc
Confidence            6665543

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.47  E-value=0.00091  Score=60.48  Aligned_cols=140  Identities=15%  Similarity=0.139  Sum_probs=92.1

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHH--HHH--HHHHHccCCccceeecchhhHHHHHH
Q 019311          157 NSIKGALMITAGCFSWSFFIILQAITLKAYPAELSLTAWICFFGTVE--GTL--AALIMERGKASIWAIHWDTKLVASVY  232 (343)
Q Consensus       157 ~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~--~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~  232 (343)
                      +...|.++.+++++||+...+-+|+ .|+.+  +... |- ..+.+.  +.|  ...+..+.-.+.....+...+..-..
T Consensus         4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~w~--wE~~-W~-v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l   78 (345)
T PRK13499          4 AIILGIIWHLIGGASSGSFYAPFKK-VKKWS--WETM-WS-VGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFL   78 (345)
T ss_pred             hhHHHHHHHHHHHHHhhcccccccc-cCCCc--hhHH-HH-HHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHH
Confidence            4578999999999999999998888 45432  3322 32 111111  111  11111110111222233444555555


Q ss_pred             HHHHHHHHHHHHHHHhhccCCceeeee-chhHHHHHHHHHHHHHhcccc---c----hhhHHHHHHHHHhhhhhhccC
Q 019311          233 SGIICSGLTYYIQGIVMKDRGPVFVAA-FSPLCMVIVAIMSTIILAEQM---Y----LGRIIGAIIIIGGLYLVVWGK  302 (343)
Q Consensus       233 ~~~~~~~~~~~l~~~a~~~~~~~~~s~-~~~~~pv~~~ll~~~~~~e~~---~----~~~~iG~~li~~G~~l~~~~~  302 (343)
                      .|++ -.+++..+..++++.+.+.... ..-++-+++.+++.+++||-.   +    ....+|++++++|+.+..+..
T Consensus        79 ~G~~-W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag  155 (345)
T PRK13499         79 FGAL-WGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAG  155 (345)
T ss_pred             HHHH-HHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence            5554 7889999999999999987554 456888999999999998754   2    337889999999999998743

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.40  E-value=0.0012  Score=48.15  Aligned_cols=57  Identities=21%  Similarity=0.429  Sum_probs=35.8

Q ss_pred             HHHHHHHHHHHHHhhccCCceee-eechhHHHHHHHHHHHHHhccccchhhHHHHHHH
Q 019311          235 IICSGLTYYIQGIVMKDRGPVFV-AAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIII  291 (343)
Q Consensus       235 ~~~~~~~~~l~~~a~~~~~~~~~-s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li  291 (343)
                      +.+.+++++++..++++.+.+.+ .+...+..+.+.+.+.+++||++|+.+++|+.+|
T Consensus        36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            33578889999999999999887 5556799999999999999999999999999876

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=97.30  E-value=0.00044  Score=59.73  Aligned_cols=133  Identities=10%  Similarity=0.026  Sum_probs=76.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHHccCCccceeecchhhHHHHHHHHHHHHHH
Q 019311          161 GALMITAGCFSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGL  240 (343)
Q Consensus       161 G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  240 (343)
                      |.+.++.|+++|+...+=.|+.-..  |++....++.....+......++.+.   ..+      ..+. ...|.+ -+.
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~~g--Dg~~fQw~~~~~i~~~g~~v~~~~~~---p~f------~p~a-mlgG~l-W~~   67 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFDTG--DGFFFQWVMCSGIFLVGLVVNLILGF---PPF------YPWA-MLGGAL-WAT   67 (254)
T ss_pred             CchhHHHHHHHhcccceeeEeccCC--CcHHHHHHHHHHHHHHHHHHHHhcCC---Ccc------eeHH-Hhhhhh-hhc
Confidence            5678889999999999987775432  56666666555555555554443322   111      1111 111222 334


Q ss_pred             HHHHHHHhhccCCceeeeec-hhHHHHHHHHHHHH-Hhcccc-----chhhHHHHHHHHHhhhhhhccCccCC
Q 019311          241 TYYIQGIVMKDRGPVFVAAF-SPLCMVIVAIMSTI-ILAEQM-----YLGRIIGAIIIIGGLYLVVWGKSKDH  306 (343)
Q Consensus       241 ~~~l~~~a~~~~~~~~~s~~-~~~~pv~~~ll~~~-~~~e~~-----~~~~~iG~~li~~G~~l~~~~~~~~~  306 (343)
                      +..+-.-.++.++....-.+ ...+.+.+...+.+ +||++.     .+..++|++++++|..++..-|.+++
T Consensus        68 gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~~  140 (254)
T PF07857_consen   68 GNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEEK  140 (254)
T ss_pred             CceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCCC
Confidence            44444455555554433322 33355566666554 455533     45689999999999988876655543

The region concerned is approximately 280 residues long.

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=97.26  E-value=0.0026  Score=47.64  Aligned_cols=109  Identities=9%  Similarity=0.054  Sum_probs=76.6

Q ss_pred             HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHHccCCccceeecchhhHHHHHHHHHHHHHHHHHHHH
Q 019311          167 AGCFSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGLTYYIQG  246 (343)
Q Consensus       167 ~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~  246 (343)
                      +-+++|+..+-+.|+..+..++.... . +..-....     ++.              .|-..+  .+.....+...|+
T Consensus         3 ~Vg~~WG~Tnpfik~g~~~~~~~~~~-~-~~~~~~~~-----Ll~--------------n~~y~i--pf~lNq~GSv~f~   59 (113)
T PF10639_consen    3 LVGILWGCTNPFIKRGSSGLEKVKAS-L-QLLQEIKF-----LLL--------------NPKYII--PFLLNQSGSVLFF   59 (113)
T ss_pred             eehHHhcCchHHHHHHHhhcCCccch-H-HHHHHHHH-----HHH--------------hHHHHH--HHHHHHHHHHHHH
Confidence            45789999999999988876532221 1 21111111     110              111111  2333566777888


Q ss_pred             HhhccCCceeeeech-hHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhh
Q 019311          247 IVMKDRGPVFVAAFS-PLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLV  298 (343)
Q Consensus       247 ~a~~~~~~~~~s~~~-~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~  298 (343)
                      +.+.+.+.+.+.++. .+.-+++++.++++.+|..+...++|++++++|+.+.
T Consensus        60 ~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   60 LLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            999999999999985 9999999999988888888999999999999998764

Many members are annotated as potential transmembrane proteins.

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=97.24  E-value=0.096  Score=46.92  Aligned_cols=243  Identities=14%  Similarity=0.138  Sum_probs=142.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHh-chhHHHHHHHHHHHhhcccc-ccccccchhhHHHHHHHh
Q 019311           45 MTLAILTKLLLLGLLEPVIDQNLYFIGMKYTTATFAAAMY-NILPAITFLMAWIIRLENVN-LKSIRSLAKVIGTLATVA  122 (343)
Q Consensus        45 ~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~p~~~~lla~~~~~e~~~-~~~~~~~~k~~~~~i~~~  122 (343)
                      .+...+.+..+.|++= .+....|=.+++|+..+...-+. .+..++..++-.++.++--. ..++.+..-++|++++++
T Consensus        68 ~~~~~l~~~~l~G~lW-GIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~Li  146 (344)
T PF06379_consen   68 TPASTLFWTFLFGVLW-GIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLI  146 (344)
T ss_pred             CChhHHHHHHHHHHHH-hcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHH
Confidence            3456677777777776 67777788999999988775554 77777777776665432100 111223334999999999


Q ss_pred             hhhhheeecCcccccccccCCCCCCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHH------HHhhCC-ch----hH
Q 019311          123 GAMVMTLIKGPILELFWTKGAENHGHGSSGTTTHNSIKGALMITAGCFSWSFFIILQAI------TLKAYP-AE----LS  191 (343)
Q Consensus       123 Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~------~~~~~~-~~----~~  191 (343)
                      |+.++.......+ .     +.     +.+.++.+..+|.+.++++++..|.++.-...      ...+.. +|    ..
T Consensus       147 GIai~g~AG~~Ke-~-----~~-----~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~  215 (344)
T PF06379_consen  147 GIAICGKAGSMKE-K-----EL-----GEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLP  215 (344)
T ss_pred             HHHHHhHHHHhhh-h-----hh-----ccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCc
Confidence            9999874432110 0     00     01123345678999999999999988876432      111111 12    11


Q ss_pred             HHHHHHHHHHHHHHHHHHHHccC--Ccc---ceeecch---hhHHHHHHHHHHHHHHHHHHHHHhhccCCc----eeeee
Q 019311          192 LTAWICFFGTVEGTLAALIMERG--KAS---IWAIHWD---TKLVASVYSGIICSGLTYYIQGIVMKDRGP----VFVAA  259 (343)
Q Consensus       192 ~~~~~~~~~~i~~~~~~~~~~~~--~~~---~~~~~~~---~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~----~~~s~  259 (343)
                      .....+..+++.-+.++++....  +..   +.....+   .++..-+..|.+ -...+.+|..+-.+.++    .--.+
T Consensus       216 ~~vvv~~GGf~tN~~yc~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~l-Wy~qfffYg~G~s~lg~~~~~~sW~i  294 (344)
T PF06379_consen  216 VYVVVLWGGFITNLIYCLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVL-WYSQFFFYGMGESKLGASGPFSSWAI  294 (344)
T ss_pred             hhhhhhhhHHHHHHHHHHHHHhhcCCCccccccccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCccccHHHHH
Confidence            23334455666666776654221  111   1111111   122223333343 45566666667666664    34556


Q ss_pred             chhHHHHHHHHHHHHHhcc------ccchhhHHHHHHHHHhhhhhhcc
Q 019311          260 FSPLCMVIVAIMSTIILAE------QMYLGRIIGAIIIIGGLYLVVWG  301 (343)
Q Consensus       260 ~~~~~pv~~~ll~~~~~~e------~~~~~~~iG~~li~~G~~l~~~~  301 (343)
                      .+.+..+++-+++. .++|      +.-..-++|+++++.++.++-+.
T Consensus       295 ~ma~~vl~snvwGl-~lkEWKg~s~kt~~vl~~G~~vlI~s~~ivG~G  341 (344)
T PF06379_consen  295 HMALIVLFSNVWGL-ILKEWKGASKKTIRVLVLGIAVLILSVVIVGYG  341 (344)
T ss_pred             HHHHHHHHHHHHHH-HHHHhccCCcccHHHHHHHHHHHHHHHHHHhcc
Confidence            77888888888885 4666      23344688999888888776543

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.11  E-value=0.0063  Score=44.30  Aligned_cols=57  Identities=12%  Similarity=0.058  Sum_probs=35.2

Q ss_pred             HHHHHHHHHHHHHHhhcccchhHHHHHh-chhHHHHHHHHHHHhhccccccccccchhhHHHHH
Q 019311           57 GLLEPVIDQNLYFIGMKYTTATFAAAMY-NILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLA  119 (343)
Q Consensus        57 g~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i  119 (343)
                      .+..+.+++.++..++++.|.+.+-.+. .+..+.+.+++.+++||+++..+      ++|+.+
T Consensus        35 ~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~------~~gi~l   92 (93)
T PF00893_consen   35 AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSK------WLGIGL   92 (93)
T ss_dssp             HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------Hhheee
Confidence            3434588889999999999999996665 79999999999999999999997      988875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.06  E-value=0.0061  Score=47.91  Aligned_cols=105  Identities=17%  Similarity=0.139  Sum_probs=76.3

Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhchhHHHHHH
Q 019311           14 SPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLEPVIDQNLYFIGMKYTTATFAAAMYNILPAITFL   93 (343)
Q Consensus        14 ~p~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~l   93 (343)
                      +|+..+++.+..+++++..+....+++...+.+.. -+|....|+++ ...-.+........+++.+..+.-+.=++..+
T Consensus        29 s~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~-p~w~~lGG~lG-~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl  106 (138)
T PF04657_consen   29 SPLVASFISFGVGFILLLIILLITGRPSLASLSSV-PWWAYLGGLLG-VFFVLSNIILVPRLGAALTTILIVAGQLIASL  106 (138)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhcccccchhccC-ChHHhccHHHH-HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH
Confidence            49999999999999999988887665433332222 23444578888 88888888999999999888877554444444


Q ss_pred             -HHHH----HhhccccccccccchhhHHHHHHHhhhhh
Q 019311           94 -MAWI----IRLENVNLKSIRSLAKVIGTLATVAGAMV  126 (343)
Q Consensus        94 -la~~----~~~e~~~~~~~~~~~k~~~~~i~~~Gv~l  126 (343)
                       +-.+    .-++++++++      ++|+++.++|+.+
T Consensus       107 ~iD~fG~fg~~~~~~~~~r------~lG~~l~i~Gv~L  138 (138)
T PF04657_consen  107 LIDHFGLFGAPKRPFSLRR------ILGLALMIAGVIL  138 (138)
T ss_pred             HHHHccccCCCCCCCCHHH------HHHHHHHHHHHhC
Confidence             4332    2467777775      9999999999864

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=96.95  E-value=0.056  Score=48.47  Aligned_cols=141  Identities=14%  Similarity=0.072  Sum_probs=96.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhCC---chhHHHHHHHHHHHHHHHHHHHHHccC--Cc-----cceeecchhhHHH
Q 019311          160 KGALMITAGCFSWSFFIILQAITLKAYP---AELSLTAWICFFGTVEGTLAALIMERG--KA-----SIWAIHWDTKLVA  229 (343)
Q Consensus       160 ~G~~~~l~a~~~~a~~~i~~k~~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~-----~~~~~~~~~~~~~  229 (343)
                      .=.+..+...+.++......|...++.+   .|.+..+..-+.-.++.....+..+..  +.     ..+....+.+...
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk   94 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK   94 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence            4445555667777777777777655542   244545555455555555555433210  00     0111112223344


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhcc
Q 019311          230 SVYSGIICSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWG  301 (343)
Q Consensus       230 l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~  301 (343)
                      +..-+++ .++-.-+++.++.+.++++..+...+....++++..++++++++..||...++.+.|+.+....
T Consensus        95 ~~vPa~i-YalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~  165 (345)
T KOG2234|consen   95 VSVPALI-YALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLP  165 (345)
T ss_pred             HHHHHHH-HHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhcc
Confidence            4444454 6667778999999999999999999999999999999999999999999999999999999843

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=96.68  E-value=0.0012  Score=58.90  Aligned_cols=108  Identities=15%  Similarity=0.177  Sum_probs=80.5

Q ss_pred             HHHHHHHHHh--hCCchhHHHHHHHHHHHHHHHHHHHHHccCCccceeecchhhHHHHHHHHHHHHHHHHHHHHHhhccC
Q 019311          175 FIILQAITLK--AYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGLTYYIQGIVMKDR  252 (343)
Q Consensus       175 ~~i~~k~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~  252 (343)
                      .++.+|+..+  ..+-|..++......+.+.......+... +  ..+..++..+..++-+|++ ..++..+-+.++++.
T Consensus        32 ~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~-~--~~~~~~~~~~~~llpl~~~-~~~~~v~~n~Sl~~v  107 (316)
T KOG1441|consen   32 VIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLV-P--PSKISSKLPLRTLLPLGLV-FCISHVLGNVSLSYV  107 (316)
T ss_pred             eEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCC-C--CCccccccchHHHHHHHHH-HHHHHHhcchhhhcc
Confidence            4455788888  55667888888666666665555543322 1  1122233467778888886 788999999999999


Q ss_pred             CceeeeechhHHHHHHHHHHHHHhccccchhhHH
Q 019311          253 GPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRII  286 (343)
Q Consensus       253 ~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~i  286 (343)
                      +.+.+..+-.++|++++++++++.+|+.+...+.
T Consensus       108 ~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~l  141 (316)
T KOG1441|consen  108 PVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYL  141 (316)
T ss_pred             chhHHHHHHhhcchhHHHHHHHHhCCCCcceEEE
Confidence            9999999999999999999999999988765433

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=96.52  E-value=0.0015  Score=57.34  Aligned_cols=129  Identities=16%  Similarity=0.201  Sum_probs=97.5

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHHccCCccceeecchhhHHHHHHHH
Q 019311          155 THNSIKGALMITAGCFSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSG  234 (343)
Q Consensus       155 ~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  234 (343)
                      ..++..|..+++.+++..+...++.|+..++...    ...+               .  ..........    ...+.|
T Consensus        16 ~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~----~~~r---------------a--~~gg~~yl~~----~~Ww~G   70 (335)
T KOG2922|consen   16 SSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGA----SGLR---------------A--GEGGYGYLKE----PLWWAG   70 (335)
T ss_pred             ccCceeeeeehhhccEEEeeehhhhHHHHHHHhh----hccc---------------c--cCCCcchhhh----HHHHHH
Confidence            3467789999999999999999988887776421    0000               0  0111111111    223346


Q ss_pred             HHHHHHHHHHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhccCccCCCC
Q 019311          235 IICSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWGKSKDHKS  308 (343)
Q Consensus       235 ~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~~~~~~~~  308 (343)
                      .+...++-...+.|....|++.++++..++.+++++++..+++|++++...+|+++.++|..+.+....++++.
T Consensus        71 ~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i  144 (335)
T KOG2922|consen   71 MLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEI  144 (335)
T ss_pred             HHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCccccc
Confidence            66677788888888899999999999999999999999999999999999999999999999888766555443

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=96.50  E-value=0.0013  Score=55.43  Aligned_cols=132  Identities=14%  Similarity=0.085  Sum_probs=87.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHHccCCccceeecchhhHHHHHHHHHHHHHH
Q 019311          161 GALMITAGCFSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGL  240 (343)
Q Consensus       161 G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  240 (343)
                      ..+.+++=++.|+..-....+...   +|.+-+.-..+.+.++.+...++..+    ..   ....+..-+..|.+ -.+
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~GG---~p~qQ~lGtT~GALifaiiv~~~~~p----~~---T~~~~iv~~isG~~-Ws~   71 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKFGG---KPYQQTLGTTLGALIFAIIVFLFVSP----EL---TLTIFIVGFISGAF-WSF   71 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeecCC---ChhHhhhhccHHHHHHHHHHheeecC----cc---chhhHHHHHHhhhH-hhh
Confidence            456788889999988776554322   34444444444444444444433211    11   22233333444444 678


Q ss_pred             HHHHHHHhhccCCceeeeech-hHHHHHHHHHHHHHhccccchhh----HHHHHHHHHhhhhhhccCc
Q 019311          241 TYYIQGIVMKDRGPVFVAAFS-PLCMVIVAIMSTIILAEQMYLGR----IIGAIIIIGGLYLVVWGKS  303 (343)
Q Consensus       241 ~~~l~~~a~~~~~~~~~s~~~-~~~pv~~~ll~~~~~~e~~~~~~----~iG~~li~~G~~l~~~~~~  303 (343)
                      ++...+++.++.+.+++.++. ..+-+-+.+++.+.|||..+..+    .+..++++.|+++..+.++
T Consensus        72 GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~  139 (288)
T COG4975          72 GQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR  139 (288)
T ss_pred             hhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence            999999999999999988876 46778888999999999988775    4567788888888776554

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=96.27  E-value=0.0087  Score=53.72  Aligned_cols=74  Identities=15%  Similarity=0.232  Sum_probs=66.5

Q ss_pred             HHHHHHHHHHHHHHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhccCccC
Q 019311          231 VYSGIICSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWGKSKD  305 (343)
Q Consensus       231 ~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~~~~~  305 (343)
                      ++.+.+ -+++.+.++.|+++++++..+++...+-+|+..++.++.+|++++.+.++..+-++|+++++..+.++
T Consensus       163 l~fc~l-WF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~  236 (416)
T KOG2765|consen  163 LFFCPL-WFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ  236 (416)
T ss_pred             HHHHHH-HHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence            344444 57889999999999999999999999999999999999999999999999999999999999876654

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.25  E-value=0.011  Score=44.34  Aligned_cols=61  Identities=16%  Similarity=0.306  Sum_probs=53.7

Q ss_pred             HHHHHHHHHHhhcccchhHHHHHh-chhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhh
Q 019311           61 PVIDQNLYFIGMKYTTATFAAAMY-NILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVM  127 (343)
Q Consensus        61 ~~~~~~~~~~al~~~~~~~~~~i~-~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li  127 (343)
                      .-.+...|+..+...+.+.+..+. ++.=++|++.++++.+|..+++.      ++|+++.++|+.++
T Consensus        51 Nq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~------~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   51 NQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRT------WLGMALILAGVALC  112 (113)
T ss_pred             HHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhH------HHHHHHHHcCeeee
Confidence            366778899999999999999996 89999999999988877778776      99999999998875

Many members are annotated as potential transmembrane proteins.

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=95.71  E-value=0.58  Score=40.67  Aligned_cols=174  Identities=11%  Similarity=0.027  Sum_probs=99.2

Q ss_pred             cchhhhhhhCCCChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHH
Q 019311            2 DVLCKAALNKGMSPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLEPVIDQNLYFIGMKYTTATFAA   81 (343)
Q Consensus         2 ~~~~k~~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~   81 (343)
                      |+-.|.- +. -|++.+-++-.....+.-+....+.+   .++    .+.+.++.|.+= +.++.+..-.++....+...
T Consensus        16 ~vPvK~~-~~-gDg~~fQw~~~~~i~~~g~~v~~~~~---~p~----f~p~amlgG~lW-~~gN~~~vpii~~iGLglg~   85 (254)
T PF07857_consen   16 FVPVKKF-DT-GDGFFFQWVMCSGIFLVGLVVNLILG---FPP----FYPWAMLGGALW-ATGNILVVPIIKTIGLGLGM   85 (254)
T ss_pred             ceeeEec-cC-CCcHHHHHHHHHHHHHHHHHHHHhcC---CCc----ceeHHHhhhhhh-hcCceeehhHhhhhhhHHHH
Confidence            4555655 33 47777766655555555444444322   222    233445555555 88888899999999999999


Q ss_pred             HHhch-hHHHHHHHHHH-HhhccccccccccchhhHHHHHHHhhhhhheeecCccccccc------ccCC---C-CCCC-
Q 019311           82 AMYNI-LPAITFLMAWI-IRLENVNLKSIRSLAKVIGTLATVAGAMVMTLIKGPILELFW------TKGA---E-NHGH-  148 (343)
Q Consensus        82 ~i~~~-~p~~~~lla~~-~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~~~~~~~~~~~------~~~~---~-~~~~-  148 (343)
                      .+.+. +-+..-..+++ +++++..... .-.-.++|++++++|..+....+.+..+...      ...+   . +++. 
T Consensus        86 liW~s~n~l~Gw~~grfGlFg~~~~~~~-~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (254)
T PF07857_consen   86 LIWGSVNCLTGWASGRFGLFGLDPQVPS-SPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEETPLSIEDVIEIEDDSE  164 (254)
T ss_pred             HHHHHHHHHHHHHHhhceeccccccccc-hhHHHHHHHHHHHHHHHheeeecCCCCCccccccccccccccccccccccc
Confidence            99865 44444444543 4544332211 0111378888888888877754433211000      0000   0 0000 


Q ss_pred             -CCCCC------CccchhHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 019311          149 -GSSGT------TTHNSIKGALMITAGCFSWSFFIILQAITLKAY  186 (343)
Q Consensus       149 -~~~~~------~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~  186 (343)
                       .++++      .......|..++++++++|+...+=.+...++.
T Consensus       165 ~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~~  209 (254)
T PF07857_consen  165 NSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDHP  209 (254)
T ss_pred             cccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHhCc
Confidence             00111      112477899999999999999988877765553

The region concerned is approximately 280 residues long.

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=95.68  E-value=0.23  Score=44.00  Aligned_cols=134  Identities=11%  Similarity=0.062  Sum_probs=87.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCCchhHHHH--HHHHHHHHHHHHHHHHHccCCccceeecchhhHHHHHHHHHHHHH
Q 019311          162 ALMITAGCFSWSFFIILQAITLKAYPAELSLTA--WICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSG  239 (343)
Q Consensus       162 ~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  239 (343)
                      ...++.=+++.....+.+|.....++-|..+..  .|.+.+.+.....-...-- +.+.........|..+..+    ..
T Consensus        14 l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv-~~~~l~~~~~kk~~P~~~l----f~   88 (314)
T KOG1444|consen   14 LLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLV-NFRPLDLRTAKKWFPVSLL----FV   88 (314)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhcee-ecCCcChHHHHHHccHHHH----HH
Confidence            344444455555566677888777765555444  7777777665555432211 2222222222233322111    11


Q ss_pred             HHHHHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhc
Q 019311          240 LTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVW  300 (343)
Q Consensus       240 ~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~  300 (343)
                      .....-..++++.+.....++..+.|+++.+.+..++|.+++...+.....+++|......
T Consensus        89 ~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~  149 (314)
T KOG1444|consen   89 GMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAF  149 (314)
T ss_pred             HHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhcc
Confidence            1233345789999999999999999999999999999999999999999999999877654

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=95.36  E-value=0.053  Score=48.52  Aligned_cols=142  Identities=15%  Similarity=0.138  Sum_probs=89.7

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHH-HHHHHHHHHHHHHHH-HccCCc-cceeecchhhHHHHHHH
Q 019311          157 NSIKGALMITAGCFSWSFFIILQAITLKAYPAELSLTAW-ICFFGTVEGTLAALI-MERGKA-SIWAIHWDTKLVASVYS  233 (343)
Q Consensus       157 ~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~-~~~~~~-~~~~~~~~~~~~~l~~~  233 (343)
                      ....|.++..+++++.+.+.+-.||. |+.+  +..... +.+++.+ ..|.... ..-++. +.....+...+....+.
T Consensus         4 ~ii~Gii~h~iGg~~~~sfy~P~kkv-k~Ws--WEs~Wlv~gi~swl-i~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~   79 (344)
T PF06379_consen    4 AIILGIIFHAIGGFASGSFYVPFKKV-KGWS--WESYWLVQGIFSWL-IVPWLWALLAIPDFFSIYSATPASTLFWTFLF   79 (344)
T ss_pred             hHHHHHHHHHHHHHHhhhhccchhhc-CCcc--HHHHHHHHHHHHHH-HHHHHHHHHhCCcHHHHHHhCChhHHHHHHHH
Confidence            45789999999999999999988884 4443  332222 2233332 2332221 221122 12223344456666777


Q ss_pred             HHHHHHHHHHHHHHhhccCCcee-eeechhHHHHHHHHHHHHHhcc-------ccchhhHHHHHHHHHhhhhhhccCc
Q 019311          234 GIICSGLTYYIQGIVMKDRGPVF-VAAFSPLCMVIVAIMSTIILAE-------QMYLGRIIGAIIIIGGLYLVVWGKS  303 (343)
Q Consensus       234 ~~~~~~~~~~l~~~a~~~~~~~~-~s~~~~~~pv~~~ll~~~~~~e-------~~~~~~~iG~~li~~G~~l~~~~~~  303 (343)
                      |++ -.++-..|-.++||++.+. .++..-+.-++..++--++.++       +-....++|+++.++|+.+..+...
T Consensus        80 G~l-WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~  156 (344)
T PF06379_consen   80 GVL-WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGS  156 (344)
T ss_pred             HHH-HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHH
Confidence            776 6788888999999998864 4555666666666665554332       2234589999999999999876543

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=94.59  E-value=0.4  Score=37.87  Aligned_cols=111  Identities=15%  Similarity=0.083  Sum_probs=63.4

Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHh-chhHHHHH
Q 019311           14 SPYVLVVYRHAAATIAMAPFAVILDKKIRPKMTLAILTKLLLLGLLEPVIDQNLYFIGMKYTTATFAAAMY-NILPAITF   92 (343)
Q Consensus        14 ~p~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~p~~~~   92 (343)
                      +|+...+..+..+.+++..+.+.+.++......++.-+|....|+++ +..-..-........++....+. .-+-+...
T Consensus        33 spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lG-a~~vt~s~~l~p~lGa~~t~~l~i~gQli~gl  111 (150)
T COG3238          33 SPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLG-AIFVTSSILLAPRLGAATTIALVIAGQLIMGL  111 (150)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchh-hhhhhhhHHhccchhHHHHHHHHHHHHHHHHH
Confidence            59999999999999999888887444332222233334455666666 55444444555555555555544 33333333


Q ss_pred             HHHHH-HhhccccccccccchhhHHHHHHHhhhhhhe
Q 019311           93 LMAWI-IRLENVNLKSIRSLAKVIGTLATVAGAMVMT  128 (343)
Q Consensus        93 lla~~-~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~  128 (343)
                      ++-.+ +++++   +++++..|++|+++.++|++++.
T Consensus       112 liD~fG~~g~~---~~~~~~~r~lgi~L~l~gil~~~  145 (150)
T COG3238         112 LIDHFGWFGVP---KRPLNLPRILGILLVLAGILLAR  145 (150)
T ss_pred             HHHhhcccCCC---cCCCCHHHHHHHHHHHHHHHHhc
Confidence            33221 12111   12333446999999999955543

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=94.58  E-value=0.66  Score=40.88  Aligned_cols=130  Identities=12%  Similarity=0.019  Sum_probs=92.7

Q ss_pred             HHHHHHHHHHHHHHHh--------hCCchhHHHHHHHHHHHHHHHHHHHHHccCCccceeecchhhHHHHHHHHHHHHHH
Q 019311          169 CFSWSFFIILQAITLK--------AYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGIICSGL  240 (343)
Q Consensus       169 ~~~~a~~~i~~k~~~~--------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  240 (343)
                      -..+-.+.++++++..        +..++..+.+.+-+.+.++.....-  .. ..+   ......|+...+.++- ..+
T Consensus        23 ~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~--~~-k~~---~~~~apl~~y~~is~t-n~~   95 (327)
T KOG1581|consen   23 YATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLK--WW-KKE---LSGVAPLYKYSLISFT-NTL   95 (327)
T ss_pred             HHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHh--cc-ccc---CCCCCchhHHhHHHHH-hhc
Confidence            3444455666665443        2335566666666766666533322  11 111   2233355666666764 677


Q ss_pred             HHHHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhccCccC
Q 019311          241 TYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWGKSKD  305 (343)
Q Consensus       241 ~~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~~~~~  305 (343)
                      +-.+.+.|++|++=.+..+.-....+-..+++.++.+.+.++.+++-..+|-.|+.+....+..+
T Consensus        96 s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~  160 (327)
T KOG1581|consen   96 SSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSD  160 (327)
T ss_pred             chHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCC
Confidence            88888999999999988899999999999999999999999999999999999999888776554

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=94.40  E-value=0.32  Score=42.79  Aligned_cols=124  Identities=10%  Similarity=0.082  Sum_probs=86.6

Q ss_pred             HHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHHccCCccceeecchhhHH-HHHHHHHHHHHHHHHHHHHhhccCCceee
Q 019311          179 QAITLKAYPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLV-ASVYSGIICSGLTYYIQGIVMKDRGPVFV  257 (343)
Q Consensus       179 ~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~l~~~a~~~~~~~~~  257 (343)
                      .++..+.++-|...+.....+-.......-.+.+...+......+..... .+.-.|+ +++.=..+-++++++++.+..
T Consensus        35 ~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtal-ata~DIGLSN~sl~yVtlSlY  113 (349)
T KOG1443|consen   35 FKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTAL-ATALDIGLSNWSLEYVTLSLY  113 (349)
T ss_pred             hhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhh-hhhcccccccceeeeeeeeee
Confidence            44445555557777777777766655555544443111111111111222 2233344 477777888999999999999


Q ss_pred             eechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhccCc
Q 019311          258 AAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWGKS  303 (343)
Q Consensus       258 s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~~~  303 (343)
                      ++.-+..++|..+++.++-=|++++....=+.+|.+|+++.+++..
T Consensus       114 TM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsT  159 (349)
T KOG1443|consen  114 TMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKST  159 (349)
T ss_pred             eeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEeccc
Confidence            9999999999999999999999999999999999999998887554

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=94.01  E-value=0.15  Score=42.96  Aligned_cols=74  Identities=12%  Similarity=0.119  Sum_probs=67.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhchhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhh
Q 019311           48 AILTKLLLLGLLEPVIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVM  127 (343)
Q Consensus        48 ~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li  127 (343)
                      ..|+.+.+.++++ .+++.+.+.-..+-+|-..+++..+--.|+.+.+.++++.+++.+|      |+|..+.+.|...=
T Consensus       239 ~~~~~l~l~ai~s-~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQ------wlgtvlVF~aL~~D  311 (337)
T KOG1580|consen  239 YVFWDLTLLAIAS-CLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQ------WLGTVLVFSALTAD  311 (337)
T ss_pred             HHHHHHHHHHHHH-HhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHH------HHHHHHHHHHhhhH
Confidence            4577788888888 8999999999999999999999999999999999999999999998      99999999988765


Q ss_pred             e
Q 019311          128 T  128 (343)
Q Consensus       128 ~  128 (343)
                      .
T Consensus       312 ~  312 (337)
T KOG1580|consen  312 V  312 (337)
T ss_pred             h
Confidence            5

>TIGR00803 nst UDP-galactose transporter

Probab=93.74  E-value=0.059  Score=46.07  Aligned_cols=59  Identities=8%  Similarity=-0.005  Sum_probs=53.4

Q ss_pred             HHHHHHHHHhhcccchhHHHHHhchhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhh
Q 019311           62 VIDQNLYFIGMKYTTATFAAAMYNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMV  126 (343)
Q Consensus        62 ~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~l  126 (343)
                      +....+....+++.++...+....+.++++.+++.++++|+++..+      ++|+.+.+.|+.+
T Consensus       163 a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~------~~g~~lV~~~~~l  221 (222)
T TIGR00803       163 VGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTF------YLGAILVFLATFL  221 (222)
T ss_pred             HhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHH------HHHHHHHHeeeEe
Confidence            5666778899999999999999999999999999999999999998      9999999988653

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=93.66  E-value=0.035  Score=45.44  Aligned_cols=63  Identities=21%  Similarity=0.346  Sum_probs=58.2

Q ss_pred             HHHHHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhccC
Q 019311          240 LTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWGK  302 (343)
Q Consensus       240 ~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~~  302 (343)
                      .+.+.|..++++++++.++.+..-+..+..+++++.+++++...+++..++.+.|++...+..
T Consensus        65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~D  127 (290)
T KOG4314|consen   65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYAD  127 (290)
T ss_pred             cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEecc
Confidence            357888999999999999999999999999999999999999999999999999998887644

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=93.56  E-value=0.61  Score=39.18  Aligned_cols=111  Identities=12%  Similarity=0.121  Sum_probs=91.3

Q ss_pred             CCChhHHHHHHHHHHHHHHHHHHHHhccCCCC----CCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhchh
Q 019311           12 GMSPYVLVVYRHAAATIAMAPFAVILDKKIRP----KMTLAILTKLLLLGLLEPVIDQNLYFIGMKYTTATFAAAMYNIL   87 (343)
Q Consensus        12 ~~~p~~~~~~r~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~   87 (343)
                      +...++..++.-.++..+++.+....+.+.+.    .++.....+.+..|++. ....+|.-++++.++.+..+++..+.
T Consensus       182 Nf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~s-vgiSy~saWcvrVtSSTtySMvGALN  260 (309)
T COG5070         182 NFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCS-VGISYCSAWCVRVTSSTTYSMVGALN  260 (309)
T ss_pred             ccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHH-hhhhhccceeEeehhhhHHHHHHHhh
Confidence            45678888999999999999888877665443    23455567888888888 66677888999999999999999999


Q ss_pred             HHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhhee
Q 019311           88 PAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTL  129 (343)
Q Consensus        88 p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~  129 (343)
                      -.-.++.+.++++|+.+...      +.++.+++....+-.+
T Consensus       261 Klp~alaGlvffdap~nf~s------i~sillGflsg~iYav  296 (309)
T COG5070         261 KLPIALAGLVFFDAPVNFLS------IFSILLGFLSGAIYAV  296 (309)
T ss_pred             hChHHHhhhhhcCCchhHHH------HHHHHHHHHHHHHHHH
Confidence            99999999999999999986      9999998877666553

>PRK02237 hypothetical protein; Provisional

Probab=91.90  E-value=2.3  Score=31.39  Aligned_cols=54  Identities=17%  Similarity=0.234  Sum_probs=42.0

Q ss_pred             Hhhcc-cchhHHHHHh-chhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhhee
Q 019311           70 IGMKY-TTATFAAAMY-NILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTL  129 (343)
Q Consensus        70 ~al~~-~~~~~~~~i~-~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~  129 (343)
                      ..++- .+.+.+-..+ ....+...+-.+.+.|+|+++.+      ++|..++++|+.++..
T Consensus        50 lTl~p~~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D------~iGa~v~L~G~~iI~~  105 (109)
T PRK02237         50 LTLQPDAAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWD------WIGAAICLVGMAVIMY  105 (109)
T ss_pred             HhcCCchhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhH------HHhHHHHHHhHHHhee
Confidence            33443 4456555555 67777777889999999999998      9999999999998863

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=91.38  E-value=0.039  Score=47.10  Aligned_cols=138  Identities=13%  Similarity=0.057  Sum_probs=96.8

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHhh-CCchhHHHHHHHHHHHHHHHHHHHHHccCCccceeecchhhHHHHHHHHH
Q 019311          157 NSIKGALMITAGCFSWSFFIILQAITLKA-YPAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHWDTKLVASVYSGI  235 (343)
Q Consensus       157 ~~~~G~~~~l~a~~~~a~~~i~~k~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  235 (343)
                      ..++|..++=.=++|-......+..+.++ ...|..-++..+..-+++-.++.++-..    ..    ...|..-+.+++
T Consensus        15 k~li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~----~~----~~~~~hYilla~   86 (336)
T KOG2766|consen   15 KTLIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRRK----YI----KAKWRHYILLAF   86 (336)
T ss_pred             hhhheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhhH----HH----HHHHHHhhheeE
Confidence            44555555444444444444555555555 3356777777777666666666654221    11    113344455566


Q ss_pred             HHHHHHHHHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhccCc
Q 019311          236 ICSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWGKS  303 (343)
Q Consensus       236 ~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~~~  303 (343)
                      + ..-+.++...|.|+++-+.+..+--...+...+++|++++.+..+.++.|+++.++|+.+.+....
T Consensus        87 ~-DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV  153 (336)
T KOG2766|consen   87 V-DVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDV  153 (336)
T ss_pred             E-eecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeee
Confidence            4 667777788899999999999999999999999999999999999999999999999998876544

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=90.63  E-value=2.2  Score=31.44  Aligned_cols=54  Identities=13%  Similarity=0.270  Sum_probs=43.9

Q ss_pred             HhhcccchhHHHHHh-chhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhhee
Q 019311           70 IGMKYTTATFAAAMY-NILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTL  129 (343)
Q Consensus        70 ~al~~~~~~~~~~i~-~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~  129 (343)
                      ..++-.+.+.+-..+ ....+...+-.+.+.|+++++.+      ++|..++++|+.++..
T Consensus        49 ~Tl~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D------~iGa~i~L~G~~iI~~  103 (107)
T PF02694_consen   49 LTLQPAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWD------WIGAAICLVGVAIILF  103 (107)
T ss_pred             hhcCcccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHH------HHhHHHHHHhHHheEe
Confidence            445555566665555 78888888889999999999998      9999999999999874

; GO: 0016020 membrane

>PRK02237 hypothetical protein; Provisional

Probab=90.33  E-value=1.2  Score=32.80  Aligned_cols=46  Identities=15%  Similarity=0.156  Sum_probs=39.5

Q ss_pred             eeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhccC
Q 019311          257 VAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWGK  302 (343)
Q Consensus       257 ~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~~  302 (343)
                      .+...-.-.+.+.++.+.+-|++|+..+++|.++.++|+.+..+.+
T Consensus        62 YAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p  107 (109)
T PRK02237         62 YAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP  107 (109)
T ss_pred             HHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence            4556667788889999999999999999999999999998876644

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=90.28  E-value=0.3  Score=42.48  Aligned_cols=65  Identities=14%  Similarity=0.154  Sum_probs=59.2

Q ss_pred             HHHHHHHHHHHhhccCCceeeeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhcc
Q 019311          237 CSGLTYYIQGIVMKDRGPVFVAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWG  301 (343)
Q Consensus       237 ~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~  301 (343)
                      |-..+..+.+.++..++++...++.-.-.+|+.+++.-+++.+++..||+|+..+.+|...+-..
T Consensus        95 ~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~  159 (372)
T KOG3912|consen   95 CDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL  159 (372)
T ss_pred             HHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence            56777888899999999999999999999999999999999999999999999999998877543

>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine

Probab=88.65  E-value=0.35  Score=42.54  Aligned_cols=132  Identities=9%  Similarity=0.020  Sum_probs=69.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHHcc-CC-----cc----ceeecchhhHHHHHHHHH
Q 019311          166 TAGCFSWSFFIILQAITLKAYPAELSLTAWICFFGTVEGTLAALIMER-GK-----AS----IWAIHWDTKLVASVYSGI  235 (343)
Q Consensus       166 l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~-----~~----~~~~~~~~~~~~l~~~~~  235 (343)
                      +++.+||+..-..+|...++...| +...|-+.++.++...+..+.-+ ..     ..    +....+...+.. ...|.
T Consensus         2 ~itmlcwGSW~nt~kL~~r~gR~~-qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~-A~aGG   79 (336)
T PF07168_consen    2 VITMLCWGSWPNTQKLAERRGRLP-QHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLF-AMAGG   79 (336)
T ss_pred             eeehhhhcChHHHHHHHHhcCCcc-ceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHH-HHHhh
Confidence            456789998888888776654322 22344444444433333322211 01     11    111222223333 33343


Q ss_pred             HHHHHHHHHHHHhhccCCceeeeechh-HHHHHHHHHHHHHhccccc--hhhHHHHHHHHHhhhhhhc
Q 019311          236 ICSGLTYYIQGIVMKDRGPVFVAAFSP-LCMVIVAIMSTIILAEQMY--LGRIIGAIIIIGGLYLVVW  300 (343)
Q Consensus       236 ~~~~~~~~l~~~a~~~~~~~~~s~~~~-~~pv~~~ll~~~~~~e~~~--~~~~iG~~li~~G~~l~~~  300 (343)
                      +.--++.++..+++...+.+.+-++.. +.-++.+++.|+. ..+.+  ..-..|++++++++++-..
T Consensus        80 vvfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYfl-d~~~n~a~iLF~GV~cf~iAI~lga~  146 (336)
T PF07168_consen   80 VVFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYFL-DPKINRAEILFPGVACFLIAIILGAA  146 (336)
T ss_pred             HhhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeeec-cCCCCCceEEEccHHHHHHHHHHHHH
Confidence            346678888888888887776555442 2233344555543 34443  2456788888888777653

Transport is dependent on glucose and a proton gradient [].

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=88.06  E-value=1.7  Score=31.99  Aligned_cols=47  Identities=17%  Similarity=0.218  Sum_probs=39.8

Q ss_pred             eeechhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhccCc
Q 019311          257 VAAFSPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWGKS  303 (343)
Q Consensus       257 ~s~~~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~~~  303 (343)
                      .+...-.-.+.+.++++.+-+++|+..+++|.++.++|+.+..+.++
T Consensus        60 YAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR  106 (107)
T PF02694_consen   60 YAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR  106 (107)
T ss_pred             HHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence            45556667788899999999999999999999999999988876543

; GO: 0016020 membrane

>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4)

Probab=82.48  E-value=0.4  Score=41.52  Aligned_cols=49  Identities=8%  Similarity=0.120  Sum_probs=0.0

Q ss_pred             hcccchhHHHHHhchhHHHHHHHHH--HHhhccccccccccchhhHHHHHHHhhhhh
Q 019311           72 MKYTTATFAAAMYNILPAITFLMAW--IIRLENVNLKSIRSLAKVIGTLATVAGAMV  126 (343)
Q Consensus        72 l~~~~~~~~~~i~~~~p~~~~lla~--~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~l  126 (343)
                      ++-.+-+..+++++.+.+++.++-.  +|.|+-+.+..      .+++++.++-..+
T Consensus        44 msd~t~~a~~vl~sfAvvliiIIiIImlF~RrLLCPLG------lLCiilimi~lLv   94 (381)
T PF05297_consen   44 MSDLTQGALTVLYSFAVVLIIIIIIIMLFKRRLLCPLG------LLCIILIMIVLLV   94 (381)
T ss_dssp             ---------------------------------------------------------
T ss_pred             HhccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCcch------HHHHHHHHHHHHH
Confidence            3333444445555554444443333  33344455554      6665555544433

LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=82.14  E-value=2.5  Score=36.81  Aligned_cols=111  Identities=15%  Similarity=0.154  Sum_probs=75.8

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHccCCccceeecc----hhhHHHHHHHHHHHHHHHHHHHHHhhccCCceeeeechh
Q 019311          187 PAELSLTAWICFFGTVEGTLAALIMERGKASIWAIHW----DTKLVASVYSGIICSGLTYYIQGIVMKDRGPVFVAAFSP  262 (343)
Q Consensus       187 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~  262 (343)
                      +.|.-.+.++++....+...+...... ....+..+.    -....-+.=+.++ -.......+..+++++.+-.-+-..
T Consensus        59 d~plf~t~~qcLvt~~~c~~ls~ls~k-~~~~ftfp~~~ldl~t~r~vlplsvV-fi~mI~fnnlcL~yVgVaFYyvgRs  136 (347)
T KOG1442|consen   59 DAPLFITWYQCLVTTSICLVLSSLSVK-YPGLFTFPSLQLDLATARQVLPLSVV-FILMISFNNLCLKYVGVAFYYVGRS  136 (347)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHhh-ccceeccCcccccHHHHHhhcchhhe-eeeehhccceehhhcceEEEEeccc
Confidence            357888888888877766666554332 111111111    0011111111221 2334556778999999999999999


Q ss_pred             HHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhh
Q 019311          263 LCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVV  299 (343)
Q Consensus       263 ~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~  299 (343)
                      +..+|++++++++++++-+..-..++.+|+.|..+-+
T Consensus       137 LttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGv  173 (347)
T KOG1442|consen  137 LTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGV  173 (347)
T ss_pred             hhhhHHHHhHHhhcccccccccceeehhheehheecc
Confidence            9999999999999999999999999999999977654

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=82.04  E-value=3.1  Score=30.47  Aligned_cols=61  Identities=16%  Similarity=0.203  Sum_probs=47.0

Q ss_pred             HHHHHHHHHhhcccchhHHHHHh-chhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhhe
Q 019311           62 VIDQNLYFIGMKYTTATFAAAMY-NILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMT  128 (343)
Q Consensus        62 ~~~~~~~~~al~~~~~~~~~~i~-~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~  128 (343)
                      -.+..+||.-++.++.+.+..+. ++.-.|+.+.+..+ +|+...+.     -+.|..+.++|+.++.
T Consensus        63 qcgSaly~~tLa~a~islavpv~nsltfafta~~G~~L-GE~~~g~~-----a~lGt~liv~Gi~Lci  124 (125)
T KOG4831|consen   63 QCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKAL-GEETQGGL-----ALLGTSLIVFGIWLCI  124 (125)
T ss_pred             HhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHh-ccccccce-----eehhhhHHhhhhhhee
Confidence            34467788999999999988887 67888899998866 55554443     3899999999988764

>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function

Probab=81.85  E-value=17  Score=26.73  Aligned_cols=51  Identities=8%  Similarity=0.002  Sum_probs=34.5

Q ss_pred             hhcccchhHHHHHh-chhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhh
Q 019311           71 GMKYTTATFAAAMY-NILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVM  127 (343)
Q Consensus        71 al~~~~~~~~~~i~-~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li  127 (343)
                      |.+.-+.++--+++ ...-..-+.++.+++||++++..      ..|.++.+.++.++
T Consensus        55 G~~~~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~------l~af~~i~~av~fi  106 (108)
T PF04342_consen   55 GYQTFSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWNY------LWAFLCILGAVYFI  106 (108)
T ss_pred             hccccCHHHHHHHHHHHhhheeHHHHHHHhCCCccHHH------HHHHHHHHHhhhee
Confidence            33445556666666 44444556778889999999997      77777776666554

>COG1742 Uncharacterized conserved protein [Function unknown]

Probab=80.58  E-value=20  Score=26.29  Aligned_cols=54  Identities=17%  Similarity=0.255  Sum_probs=40.8

Q ss_pred             Hhhcccc-hhHHHHHh-chhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhhee
Q 019311           70 IGMKYTT-ATFAAAMY-NILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTL  129 (343)
Q Consensus        70 ~al~~~~-~~~~~~i~-~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~  129 (343)
                      ..++..+ .+.+-.-+ ....+...+-.+.+.|.++++.+      ++|..++++|+.++..
T Consensus        49 lT~~~~~a~GRvYAAYGGvyI~~sL~W~~~Vdg~~pdr~D------~~Ga~icl~G~~vil~  104 (109)
T COG1742          49 LTLQPAAAFGRVYAAYGGVYIAASLAWLWVVDGVRPDRYD------WIGAAICLAGVAVILF  104 (109)
T ss_pred             HHcCCchhhhhHHHHhcchHHHHHHHHHHHHcCcCCcHHH------hhhHHHHHhceeeeEe
Confidence            3334333 44554444 67777777778889999999998      9999999999888875

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=80.36  E-value=5.9  Score=29.06  Aligned_cols=62  Identities=13%  Similarity=0.177  Sum_probs=46.7

Q ss_pred             HHHHHHHHHHhhccCCceeeeech-hHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhh
Q 019311          238 SGLTYYIQGIVMKDRGPVFVAAFS-PLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVV  299 (343)
Q Consensus       238 ~~~~~~l~~~a~~~~~~~~~s~~~-~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~  299 (343)
                      .-.+..+|+.-+++.+-+.+..+. .+.-.++.+.+..+-.|.....-+.|..++++|+.+..
T Consensus        62 NqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci  124 (125)
T KOG4831|consen   62 NQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI  124 (125)
T ss_pred             HHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence            344566777788888888766654 56778888888765555567778999999999988754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	343
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	99.2
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.75
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.56
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.53

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=99.20  E-value=1.8e-11  Score=94.61  Aligned_cols=71  Identities=18%  Similarity=0.326  Sum_probs=54.3

Q ss_pred             HHHHHHHHHHHHHHHHhhccCCceeeeec-hhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhccC
Q 019311          232 YSGIICSGLTYYIQGIVMKDRGPVFVAAF-SPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWGK  302 (343)
Q Consensus       232 ~~~~~~~~~~~~l~~~a~~~~~~~~~s~~-~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~~  302 (343)
                      .+++++++++++++.+++++.+++++..+ ..+.|++++++++++++|++++.+++|+++|++|+++..+.+
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            35666789999999999999999999998 899999999999999999999999999999999999987643

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.75  E-value=2.4e-08  Score=74.40  Aligned_cols=70  Identities=19%  Similarity=0.330  Sum_probs=64.2

Q ss_pred             HHHHHHHHHHHHHHHHhhccCCceeeeec-hhHHHHHHHHHHHHHhccccchhhHHHHHHHHHhhhhhhcc
Q 019311          232 YSGIICSGLTYYIQGIVMKDRGPVFVAAF-SPLCMVIVAIMSTIILAEQMYLGRIIGAIIIIGGLYLVVWG  301 (343)
Q Consensus       232 ~~~~~~~~~~~~l~~~a~~~~~~~~~s~~-~~~~pv~~~ll~~~~~~e~~~~~~~iG~~li~~G~~l~~~~  301 (343)
                      ..++++.++++.++.+++++.|.+.+-.+ ..+.|+++.+++++++||++++.+++|++++++|+++....
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            35566788999999999999999999888 89999999999999999999999999999999999988754

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.56  E-value=1e-06  Score=65.50  Aligned_cols=69  Identities=17%  Similarity=0.267  Sum_probs=63.4

Q ss_pred             HHHHHHHHHHHHHHHHhhcccchhHHHHH-hchhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhhee
Q 019311           55 LLGLLEPVIDQNLYFIGMKYTTATFAAAM-YNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTL  129 (343)
Q Consensus        55 ~~g~~~~~~~~~~~~~al~~~~~~~~~~i-~~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~  129 (343)
                      +.+++...+++.++..++++.|.+.+..+ .++.|+++.+++++++||++++.+      ++|+.+.++|++++..
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~------~~Gi~lIi~Gv~~l~~  103 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPA------IIGMMLICAGVLIINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHhc
Confidence            56666668999999999999999999888 699999999999999999999997      9999999999999874

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.53  E-value=3e-07  Score=70.83  Aligned_cols=71  Identities=17%  Similarity=0.263  Sum_probs=53.6

Q ss_pred             HHHHHHHHHHHHHHHHHhhcccchhHHHHH-hchhHHHHHHHHHHHhhccccccccccchhhHHHHHHHhhhhhheee
Q 019311           54 LLLGLLEPVIDQNLYFIGMKYTTATFAAAM-YNILPAITFLMAWIIRLENVNLKSIRSLAKVIGTLATVAGAMVMTLI  130 (343)
Q Consensus        54 ~~~g~~~~~~~~~~~~~al~~~~~~~~~~i-~~~~p~~~~lla~~~~~e~~~~~~~~~~~k~~~~~i~~~Gv~li~~~  130 (343)
                      .+.+++...+++.++..++++.+++.+..+ .++.|+++.++++++++|++++.+      ++|++++++|++++...
T Consensus        33 ~~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~------~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           33 SVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPA------IIGMMLICAGVLIINLL  104 (137)
T ss_dssp             -CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------C------HHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHhcC
Confidence            356666669999999999999999999888 799999999999999999999998      99999999999998743

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00