Citrus Sinensis ID: 019357

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340--
Protein Sequence
MTGTRGSSIKIDSNDPYLRGSKYISPSTPPKQHPVSDSVSSKYFPLKPLKTHRQTKAAGKQRKKRKSENYKMRGVLKRNGTVSQLLQSHGGVNNKKITDVFTDPVASINSNLLKNQTQSREYFKLADFLRKSTRAYNEVSPYSSLFSSAYAASSARTASFSEVGFVGWYLAMVKSRPVLTKSATCSLIYIAADLSSQTIASSESYDLVRTLRMGGYGMLILGPTLHFWFNFVSKLFPKQDLVATLKKMAMGQTIYGPIMTVVFLSLNASLQGESGEEIVARLKRDLLPTMFKGVMYWPVCDFITFRFTPVHLQPLVSNSFSYLWTIYLTYTASLEKAVTTAS
Secondary Structure (PSIPRED)
ccccccccEEEcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccEEHHHHcccHHHHHHHHHcccccccccccccccccccccccccccccHHHHHccHHHHHHHHHccccccccccccccHHHccccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccEEcHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHcccccHHcccc
Secondary Structure Prediction (SSPRO)
cccccccEEEEcccccccccccEccccccccccccccccccccccccccEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccEEEccccccccccccccccccccccccccHHHHHHHccccccccccHEEccccHHHHHHcccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccEEccHHHEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHccccccccc
Coil and Loop (DISEMBL)
mtgtrgssikidsndpylrgskyispstppkqhpvsdsvsskyfplkplkthrqtkaagkqrkkrksenykmrgvlkrnGTVSQLLQshggvnnkkitdvftdpvasinsnllknqtqsREYFKLADFLRKSTraynevspysslfsSAYAASSARTASFSEVGFVGWYLAMVksrpvltksaTCSLIYIAAdlssqtiassesYDLVRTLRMGGYGMLILGPTLHFWFNfvsklfpkQDLVATLKKMAMGQTIYGPIMTVVFLSLNASLQGESGEEIVARLKRDLlptmfkgvmywpvcdfitfrftpvhlqplvsnSFSYLWTIYLTYTASLEKAVTTAS
Flexible Loop (DISEMBL)
mtgtrgssikidsndpylrGSKYispstppkqhpvsdsvsskyfplkplkthrqtkaagkqrkkrksenykmrgvlkrngtvSQLLQshggvnnkkITDVFTDPVASInsnllknqtqsrEYFKLADFLRKSTRAYNEVSPYSSLFSSAYAASSARTASFSEVGFVGWYLAMVKSRPVLTKSATCSLIYIAadlssqtiassESYDLVRTLRMGGYGMLILGPTLHFWFNFVSKLFPKQDLVATLKKMAMGQTIYGPIMTVVFLSLNASLQGESGEEIVARLKRDLLPTMFKGVMYWPVCDFITFRFTPVHLQPLVSNSFSYLWTIYLTYTASLEKAVTTAS
Low Complexity Region (SEG)
MTGTRGSSIKIDSNDPYLRGSKYISPSTPPKQHPVSDSVSSKYFPLKPLKTHRQTKAAGKQRKKRKSENYKMRGVLKRNGTVSQLLQSHGGVNNKKITDVFTDPVASINSNLLKNQTQSREYFKLADFLRKSTRAYNEVspysslfssayaassartasfsEVGFVGWYLAMVKSRPVLTKSATCSLIYIAADLSSQTIASSESYDLVRTLRMGGYGMLILGPTLHFWFNFVSKLFPKQDLVATLKKMAMGQTIYGPIMTVVFLSLNASLQGESGEEIVARLKRDLLPTMFKGVMYWPVCDFITFRFTPVHLQPLVSNSFSYLWTIYLTYTASLEKAVTTAS
Disordered region (IsUnstruct)
*****************************************************************************************GGVNNKKITDVFTDPVASINSNLLKNQTQSREYFKLADFLRKSTRAYNEVSPYSSLFSSAYAASSARTASFSEVGFVGWYLAMVKSRPVLTKSATCSLIYIAADLSSQTIASSESYDLVRTLRMGGYGMLILGPTLHFWFNFVSKLFPKQDLVATLKKMAMGQTIYGPIMTVVFLSLNASLQGESGEEIVARLKRDLLPTMFKGVMYWPVCDFITFRFTPVHLQPLVSNSFSYLWTIYLTYTASLE*******
Disordered Region (DISOPRED)
***********DSNDPYLRGSKY*****************SKYFPLKP*************************GVLKRNGTVSQLLQSHGGVNNKKITDV***************************************************************GFVGWYLAMVKSRPVLTKSATCSLIYIAADLSSQTIASSESYDLVRTLRMGGYGMLILGPTLHFWFNFVSKLFPKQDLVATLKKMAMGQTIYGPIMTVVFLSLNASLQGESGEEIVARLKRDLLPTMFKGVMYWPVCDFITFRFTPVHLQPLVSNSFSYLWTIYLT*************
Disordered Region (DISEMBL)
*********KIDSNDPYLRGSKYISP*************SSKYFPLKPLKT****************ENYKMRGVLKRNGTVSQLLQSHGGVNNKKITDVFTDPVASINSNLLKNQTQSREYFKLADFLRKSTRAYNEVSPYSSLFS**********ASFSEVGFVGWYLAMVKSRPVLTKSATCSLIYIAADLSSQTIASSESYDLVRTLRMGGYGMLILGPTLHFWFNFVSKLFPKQDLVATLKKMAMGQTIYGPIMTVVFLSLNASLQGESGEEIVARLKRDLLPTMFKGVMYWPVCDFITFRFTPVHLQPLVSNSFSYLWTIYLTYTASLEKAVTTAS
Disordered Region (DISPRO)
*******SIKIDSNDPYLRGSKYISPST*************KYFPLKPLKTHRQTKAAGKQRKKRKSENYKMRGVLKRNGTVSQLLQSHGGVNNKKITDVFTDPVASINSNLL*****SREYFKLADFLRKSTRAYNEVSPYSSLFSSAYAASSARTASFSEVGFVGWYLAMVKSRPVLTKSATCSLIYIAADLSSQTIASSESYDLVRTLRMGGYGMLILGPTLHFWFNFVSKLFPKQDLVATLKKMAMGQTIYGPIMTVVFLSLNASLQGESGEEIVARLKRDLLPTMFKGVMYWPVCDFITFRFTPVHLQPLVSNSFSYLWTIYLTYTASL********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTGTRGSSIKIDSNDPYLRGSKYISPSTPPKQHPVSDSVSSKYFPLKPLKTHRQTKAAGKQRKKRKSENYKMRGVLKRNGTVSQLLQSHGGVNNKKITDVFTDPVASINSNLLKNQTQSREYFKLADFLRKSTRAYNEVSPYSSLFSSAYAASSARTASFSEVGFVGWYLAMVKSRPVLTKSATCSLIYIAADLSSQTIASSESYDLVRTLRMGGYGMLILGPTLHFWFNFVSKLFPKQDLVATLKKMAMGQTIYGPIMTVVFLSLNASLQGESGEEIVARLKRDLLPTMFKGVMYWPVCDFITFRFTPVHLQPLVSNSFSYLWTIYLTYTASLEKAVTTAS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	342	2.2.26 [Sep-21-2011]
Q54FR4	185	PXMP2/4 family protein 4	yes	no	0.406	0.751	0.321	9e-20
Q4IPX8	175	Protein SYM1 OS=Gibberell	yes	no	0.485	0.948	0.293	8e-19
Q54ZX5	202	PXMP2/4 family protein 1	no	no	0.467	0.792	0.323	4e-17
Q54GD8	184	PXMP2/4 family protein 3	no	no	0.479	0.891	0.287	3e-16
Q7SCY7	172	Protein sym-1 OS=Neurospo	N/A	no	0.467	0.930	0.285	1e-15
Q66GV0	177	Protein Mpv17 OS=Xenopus	N/A	no	0.482	0.932	0.261	1e-14
Q2TXA2	173	Protein sym1 OS=Aspergill	yes	no	0.485	0.959	0.265	2e-13
Q6CIY7	195	Protein SYM1 OS=Kluyverom	yes	no	0.5	0.876	0.259	3e-13
Q754F0	182	Protein SYM1 OS=Ashbya go	yes	no	0.494	0.928	0.28	2e-12
Q5TZ51	177	Protein Mpv17 OS=Danio re	yes	no	0.482	0.932	0.267	2e-12

>sp|Q54FR4|PX24D_DICDI PXMP2/4 family protein 4 OS=Dictyostelium discoideum GN=DDB_G0290631 PE=3 SV=1

 Score = 97.8 bits (242), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 76/143 (53%), Gaps = 4/143 (2%)

Query: 169 YLAMVKSRPVLTKSATCSLIYIAADLSSQTIASS----ESYDLVRTLRMGGYGMLILGPT 224
           YL+ +   PV TK+ T   +Y+ +D   Q I  S    + YD  R++RM  +G  + GP 
Sbjct: 15  YLSQLHKYPVATKAVTSGFLYLISDSLVQGIELSRDKDKKYDFKRSMRMAVFGFAVTGPL 74

Query: 225 LHFWFNFVSKLFPKQDLVATLKKMAMGQTIYGPIMTVVFLSLNASLQGESGEEIVARLKR 284
            H+WF ++ K FPK+       K+ + Q +  P+   +F S    L+G+S ++IV +LK+
Sbjct: 75  FHYWFKYLDKHFPKKSYRHAFIKLTIDQVVCSPVFNFLFFSGMGILEGKSKDDIVEKLKK 134

Query: 285 DLLPTMFKGVMYWPVCDFITFRF 307
           D L T     + WP  +F+ F +
Sbjct: 135 DWLTTYVSDCVVWPFINFVNFAY 157

Dictyostelium discoideum (taxid: 44689)

>sp|Q4IPX8|SYM1_GIBZE Protein SYM1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=SYM1 PE=3 SV=1

 Score = 94.7 bits (234), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 91/174 (52%), Gaps = 8/174 (4%)

Query: 165 FVGWYLAMVKSRPVLTKSATCSLIYIAADLSSQTIAS---SESYDLVRTLRMGGYGMLIL 221
           F+ WY + + +RP+LT+S T + ++   D+++Q +     ++ +DLVRT RM  YG  + 
Sbjct: 4   FIRWYNSRLAARPLLTQSVTTAFLFATGDVTAQQLVEKRGAQKHDLVRTGRMALYGGFVF 63

Query: 222 GPTLHFWFNFVSKLFPKQD--LVATLKKMAMGQTIYGPIMTVVFLSLNASLQGESGEEIV 279
           GP    WF F+++    ++      L ++A  Q  + P+M  VFLS  A+++G+S +E  
Sbjct: 64  GPVATTWFAFLARRVNVRNNKKAEVLARVACDQLGFAPVMIGVFLSSMATMEGKSVKE-- 121

Query: 280 ARLKRDLLPTMFKGVMYWPVCDFITFRFTPVHLQPLVSNSFSYLWTIYLTYTAS 333
            R+ +   P +    M WP    I F   P+  +   +N  +  W  YL++  S
Sbjct: 122 -RIDKTWWPALKANWMVWPAVQVINFSLIPLQYRLFFANIIAIGWNSYLSWVNS 174

May be involved in cellular response to stress. Required to maintain mitochondrial DNA (mtDNA) integrity and stability.

Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) (taxid: 229533)

>sp|Q54ZX5|PX24A_DICDI PXMP2/4 family protein 1 OS=Dictyostelium discoideum GN=DDB_G0277335 PE=3 SV=1

 Score = 89.0 bits (219), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 85/164 (51%), Gaps = 4/164 (2%)

Query: 169 YLAMVKSRPVLTKSATCSLIYIAADLSSQTIASSESYDLVRTLRMGGYGMLILGPTLHFW 228
           Y   +++RPV+TKS T ++++   D  +Q I  +  YD  RTL M   G  I+ P +HFW
Sbjct: 13  YKKSLQNRPVITKSLTGTVVFFLGDTLAQKI-ENRGYDPKRTLMMCTVGTFIVVPQIHFW 71

Query: 229 FNFVSKLFPKQDLVATLKKMAMGQTIYGPIMTVVFL-SLNASLQGESGE--EIVARLKRD 285
           F F+ K F K      + K+ + Q  +GP + V  + S+    QG + +  +   ++K+D
Sbjct: 72  FKFLDKTFTKPGWAGAIPKVVVDQLTFGPYLFVCNMTSVQLFHQGFNFDTHQWKDKMKKD 131

Query: 286 LLPTMFKGVMYWPVCDFITFRFTPVHLQPLVSNSFSYLWTIYLT 329
             P + K  M WP+ + I FRF     + L+SN  S  W   L+
Sbjct: 132 FFPVLQKAWMIWPLTNCILFRFVHPDYRILISNLVSVGWNCILS 175

Dictyostelium discoideum (taxid: 44689)

>sp|Q54GD8|PX24C_DICDI PXMP2/4 family protein 3 OS=Dictyostelium discoideum GN=DDB_G0290223 PE=3 SV=1

 Score = 86.7 bits (213), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 86/167 (51%), Gaps = 3/167 (1%)

Query: 168 WYLAMVKSRPVLTKSATCSLIYIAADLSSQTIASSESYDLVRTLRMGGYGMLILGPTLHF 227
           WY+  +KS+P+ TK+ T + +   + + +Q     +  +    ++   +G LI  P +H+
Sbjct: 16  WYMKKLKSKPIQTKALTSATLSFISSVVAQKFIEKKKINWNAVVKFTVWG-LISSPLVHY 74

Query: 228 WFNFVSKLFPK-QDLVATLKKMAMGQTIYGPIMTVVFLSLNASLQGESGEEIVARLKRDL 286
           W   + +LF   +D   +  K+ + Q ++ P + + F S+ A L G+  + I+ +L  DL
Sbjct: 75  WHIILDRLFKNIKDKYQSWGKLIVDQLVFAPFINIAFYSVLAILDGKP-KSILFKLYFDL 133

Query: 287 LPTMFKGVMYWPVCDFITFRFTPVHLQPLVSNSFSYLWTIYLTYTAS 333
            PT+      WP+   I FRF P HL+ L  N   + W IYL+  A+
Sbjct: 134 FPTLKASWKVWPLAQLINFRFVPSHLRVLFGNLVGFCWGIYLSILAT 180

Dictyostelium discoideum (taxid: 44689)

>sp|Q7SCY7|SYM1_NEUCR Protein sym-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=sym-1 PE=3 SV=2

 Score = 84.0 bits (206), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 83/168 (49%), Gaps = 8/168 (4%)

Query: 168 WYLAMVKSRPVLTKSATCSLIYIAADLSSQTIASSE---SYDLVRTLRMGGYGMLILGPT 224
           WY A + +RP+LT++ T S+++   D+++Q +       ++DL RT RM  YG  + GP 
Sbjct: 4   WYKAQLAARPLLTQAVTTSILFGVGDVAAQQLVDRRGLSNHDLTRTGRMVLYGGAVFGPA 63

Query: 225 LHFWFNFVSK--LFPKQDLVATLKKMAMGQTIYGPIMTVVFLSLNASLQGESGEEIVARL 282
              WF F+ K  + P       L ++A  Q ++ P    +FL   A L+G   +E   +L
Sbjct: 64  ATTWFRFLQKRVVVPGSTNKTILARVAADQGLFAPTFIGIFLGSMAVLEGTDVKE---KL 120

Query: 283 KRDLLPTMFKGVMYWPVCDFITFRFTPVHLQPLVSNSFSYLWTIYLTY 330
           +++    +    M WP    + F+  P+  + L  N  S  W  YL++
Sbjct: 121 QKNYWEALSTNWMVWPFVQMVNFKVVPLDHRVLFVNVISIGWNCYLSW 168

May be involved in cellular response to stress. Required to maintain mitochondrial DNA (mtDNA) integrity and stability.

Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110)

>sp|Q66GV0|MPV17_XENLA Protein Mpv17 OS=Xenopus laevis GN=mpv17 PE=2 SV=2

 Score = 81.3 bits (199), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 78/168 (46%), Gaps = 3/168 (1%)

Query: 169 YLAMVKSRPVLTKSATCSLIYIAADLSSQTIASSES---YDLVRTLRMGGYGMLILGPTL 225
           Y  ++ + P   +  T   +    D+ SQ +   +    + + RT++M G G   +GP +
Sbjct: 8   YQRLLGAHPWKVQIVTAGSLVGVGDVISQQLLERKGLKGHSIERTVKMMGIGFCFVGPVV 67

Query: 226 HFWFNFVSKLFPKQDLVATLKKMAMGQTIYGPIMTVVFLSLNASLQGESGEEIVARLKRD 285
             W+  + ++ P       LKKM + Q  + P     FLS+ ++L G SGE+I  +LKRD
Sbjct: 68  GGWYKILDRIIPGSGKPVALKKMLLDQVAFAPCFLGCFLSIASALNGLSGEQIWGKLKRD 127

Query: 286 LLPTMFKGVMYWPVCDFITFRFTPVHLQPLVSNSFSYLWTIYLTYTAS 333
               +      WP      F F P++ +  V    + +W  YL++ A+
Sbjct: 128 YKDALITNYYIWPAVQVANFYFIPLYHRLAVVQFVAIIWNSYLSWKAN 175

Involved in mitochondria homeostasis.

Xenopus laevis (taxid: 8355)

>sp|Q2TXA2|SYM1_ASPOR Protein sym1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=sym1 PE=3 SV=1

 Score = 77.0 bits (188), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 7/173 (4%)

Query: 168 WYLAMVKSRPVLTKSATCSLIYIAADLSSQTIASS---ESYDLVRTLRMGGYGMLILGPT 224
           WY A +  +P+LT S T ++++ + D+ +Q +      E +D  RT RM  YG  I GP 
Sbjct: 4   WYQAKLAKQPILTASVTSAVLFGSGDVLAQQVVDRKGLEKHDFARTGRMALYGGAIFGPA 63

Query: 225 LHFWFNFVSK-LFPKQDLVATLKKMAMGQTIYGPIMTVVFLSLNASLQGESGEEIVARLK 283
              WF F+ + +  K      + ++A  Q ++ P     FL+  A ++   G + + + +
Sbjct: 64  ATTWFGFLQRNVVLKNSKATIVARVAADQCLFTPTHLTCFLTSMAIME---GSDPIEKWR 120

Query: 284 RDLLPTMFKGVMYWPVCDFITFRFTPVHLQPLVSNSFSYLWTIYLTYTASLEK 336
              LP+    +  WP+   + F   P+  + LV N  S  W   L+   S +K
Sbjct: 121 NSFLPSYKANLTIWPLVQGVNFSIVPLEYRVLVVNLVSLGWNCLLSMINSGDK 173

May be involved in cellular response to stress. Required to maintain mitochondrial DNA (mtDNA) integrity and stability.

Aspergillus oryzae (strain ATCC 42149 / RIB 40) (taxid: 510516)

>sp|Q6CIY7|SYM1_KLULA Protein SYM1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SYM1 PE=3 SV=1

 Score = 76.3 bits (186), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 6/177 (3%)

Query: 164 GFVGWYLAMVKSRPVLTKSATCSLIYIAADLSSQT---IASSESYDLVRTLRMGGYGMLI 220
           GFV WY A VK  P LT       ++   D+ +Q        + YDL RT+R   YG LI
Sbjct: 3   GFVNWYTASVKRSPRLTNGIMTGSLFGIGDVIAQVGFPEKKGQKYDLARTVRAVVYGSLI 62

Query: 221 LGPTLHFWFNFVSK---LFPKQDLVATLKKMAMGQTIYGPIMTVVFLSLNASLQGESGEE 277
                  W+ F+++   + P +    T  ++   Q ++ P+   ++  + + L+G+S  +
Sbjct: 63  FSIIGDSWYKFLNQKVIVKPGKHWTNTAARVGCDQLLFAPVGIPMYYGVMSILEGKSLVD 122

Query: 278 IVARLKRDLLPTMFKGVMYWPVCDFITFRFTPVHLQPLVSNSFSYLWTIYLTYTASL 334
              +++ +  PT+      WP    I F   PVH +    N  S  W  +L++  S+
Sbjct: 123 AKKKIEDNWWPTLVTNWYVWPAFQLINFSLVPVHHRLFSVNIISIFWNAFLSFKNSI 179

May be involved in cellular response to stress. Required to maintain mitochondrial DNA (mtDNA) integrity and stability.

Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590)

>sp|Q754F0|SYM1_ASHGO Protein SYM1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SYM1 PE=3 SV=1

 Score = 73.9 bits (180), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 79/175 (45%), Gaps = 6/175 (3%)

Query: 165 FVGWYLAMVKSRPVLTKSATCSLIYIAADLSSQTI--ASSESYDLVRTLRMGGYGMLILG 222
           F  +Y A ++S P  T + T   ++   D+ +QT       SYD +RTLR   YG ++  
Sbjct: 4   FFKFYKASLQSHPKRTNALTTGFLFGLGDIVAQTQFPEPGASYDPMRTLRPFLYGAVLFS 63

Query: 223 PTLHFWFNFVSKL----FPKQDLVATLKKMAMGQTIYGPIMTVVFLSLNASLQGESGEEI 278
                W+ F+S +     P+      L ++A  Q I+ PI   ++ +  A ++G S E++
Sbjct: 64  LVGDKWYRFLSTVRLGRLPQAHWANVLARVACDQLIFAPIGVPLYYTAMALMEGGSLEDV 123

Query: 279 VARLKRDLLPTMFKGVMYWPVCDFITFRFTPVHLQPLVSNSFSYLWTIYLTYTAS 333
             RL      T+    + WP      F   PV  + L  N  S  W  YL+Y+ S
Sbjct: 124 RIRLSEKWWSTLLANWIVWPAFQLCNFSLVPVQHRLLTVNVLSIFWNTYLSYSNS 178

May be involved in cellular response to stress. Required to maintain mitochondrial DNA (mtDNA) integrity and stability.

Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811)

>sp|Q5TZ51|MPV17_DANRE Protein Mpv17 OS=Danio rerio GN=mpv17 PE=2 SV=1

 Score = 73.6 bits (179), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 74/168 (44%), Gaps = 3/168 (1%)

Query: 169 YLAMVKSRPVLTKSATCSLIYIAADLSSQTIASSE---SYDLVRTLRMGGYGMLILGPTL 225
           Y A++   P   +  T   +    D+ SQ +       +++  RT +M   G   +GP +
Sbjct: 8   YQALMAKHPWKVQIITAGSLVGVGDVISQQLIERRGLANHNARRTAKMMSIGFFFVGPVV 67

Query: 226 HFWFNFVSKLFPKQDLVATLKKMAMGQTIYGPIMTVVFLSLNASLQGESGEEIVARLKRD 285
             W+  + KL       A LKKM + Q  + P     FL +  +L G + EE VA+L+RD
Sbjct: 68  GGWYKVLDKLVTGGTKSAALKKMLVDQVGFAPCFLGAFLGITGTLNGLTVEENVAKLQRD 127

Query: 286 LLPTMFKGVMYWPVCDFITFRFTPVHLQPLVSNSFSYLWTIYLTYTAS 333
               +      WP      F F P+H +  V    + +W  YL++ A+
Sbjct: 128 YTDALISNYYLWPPVQIANFYFIPLHHRLAVVQIVAVVWNSYLSWKAN 175

Involved in mitochondria homeostasis.

Danio rerio (taxid: 7955)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	342
297836120	248	hypothetical protein ARALYDRAFT_480374 [	0.529	0.729	0.797	4e-84
15226016	252	protein Mpv17 [Arabidopsis thaliana] gi|	0.529	0.718	0.781	6e-82
224103721	184	predicted protein [Populus trichocarpa]	0.532	0.989	0.782	3e-81
255573125	268	Protein SYM1, putative [Ricinus communis	0.681	0.869	0.642	1e-80
224056232	184	predicted protein [Populus trichocarpa]	0.532	0.989	0.766	2e-80
18418319	261	Peroxisomal membrane 22 kDa (Mpv17/PMP22	0.657	0.862	0.655	2e-79
297798524	259	hypothetical protein ARALYDRAFT_491288 [	0.520	0.687	0.788	2e-79
356575716	250	PREDICTED: PXMP2/4 family protein 4-like	0.514	0.704	0.775	6e-79
363806776	248	uncharacterized protein LOC100810534 [Gl	0.514	0.709	0.775	7e-79
449469120	257	PREDICTED: PXMP2/4 family protein 4-like	0.742	0.988	0.579	1e-75

>gi|297836120|ref|XP_002885942.1| hypothetical protein ARALYDRAFT_480374 [Arabidopsis lyrata subsp. lyrata] gi|297331782|gb|EFH62201.1| hypothetical protein ARALYDRAFT_480374 [Arabidopsis lyrata subsp. lyrata]

 Score =  317 bits (813), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 146/183 (79%), Positives = 163/183 (89%), Gaps = 2/183 (1%)

Query: 162 EVGFVGWYLAMVKSRPVLTKSATCSLIYIAADLSSQTIA--SSESYDLVRTLRMGGYGML 219
           +VGFVGWYL MVKSRPV+TKS TCSLIYIAADLSSQTI+  SSESYDLVRT RMGGYG+ 
Sbjct: 66  KVGFVGWYLGMVKSRPVVTKSVTCSLIYIAADLSSQTISKTSSESYDLVRTARMGGYGLF 125

Query: 220 ILGPTLHFWFNFVSKLFPKQDLVATLKKMAMGQTIYGPIMTVVFLSLNASLQGESGEEIV 279
           +LGPTLH+WFNF+S+LFPKQDL+ T KKMAMGQ IYGP MTV+F SLNASLQGESG +I+
Sbjct: 126 VLGPTLHYWFNFMSRLFPKQDLITTFKKMAMGQAIYGPTMTVIFFSLNASLQGESGSDIL 185

Query: 280 ARLKRDLLPTMFKGVMYWPVCDFITFRFTPVHLQPLVSNSFSYLWTIYLTYTASLEKAVT 339
           ARLKRDLLP MF GVMYWP+CDFITFRF PVHLQPLVSNSFSY+WTIY+TY A+ EK V 
Sbjct: 186 ARLKRDLLPAMFNGVMYWPLCDFITFRFFPVHLQPLVSNSFSYVWTIYMTYMANREKPVA 245

Query: 340 TAS 342
            +S
Sbjct: 246 ISS 248

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15226016|ref|NP_179092.1| protein Mpv17 [Arabidopsis thaliana] gi|3650028|gb|AAC61283.1| 22 kDa peroxisomal membrane protein [Arabidopsis thaliana] gi|124300964|gb|ABN04734.1| At2g14860 [Arabidopsis thaliana] gi|330251249|gb|AEC06343.1| protein Mpv17 [Arabidopsis thaliana]

 Score =  310 bits (794), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 143/183 (78%), Positives = 160/183 (87%), Gaps = 2/183 (1%)

Query: 162 EVGFVGWYLAMVKSRPVLTKSATCSLIYIAADLSSQTIA--SSESYDLVRTLRMGGYGML 219
            +GFVGWYL MVKS PV+TKS T SLIYIAADLSSQTIA  SSESYDLVRT RMGGYG+ 
Sbjct: 70  RIGFVGWYLGMVKSHPVVTKSVTSSLIYIAADLSSQTIAKTSSESYDLVRTARMGGYGLF 129

Query: 220 ILGPTLHFWFNFVSKLFPKQDLVATLKKMAMGQTIYGPIMTVVFLSLNASLQGESGEEIV 279
           +LGPTLH+WFNF+S+LFPKQDL+ T KKMAMGQTIYGPIMTV+F SLNASLQGE G  I+
Sbjct: 130 VLGPTLHYWFNFMSRLFPKQDLITTFKKMAMGQTIYGPIMTVIFFSLNASLQGERGSVIL 189

Query: 280 ARLKRDLLPTMFKGVMYWPVCDFITFRFTPVHLQPLVSNSFSYLWTIYLTYTASLEKAVT 339
           ARLKRDLLP +F GVMYWP+CDFITFRF PVHLQPLVSNSFSY+WTIY+TY A+ EK V 
Sbjct: 190 ARLKRDLLPALFNGVMYWPLCDFITFRFFPVHLQPLVSNSFSYVWTIYMTYMANREKPVA 249

Query: 340 TAS 342
            ++
Sbjct: 250 IST 252

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224103721|ref|XP_002313168.1| predicted protein [Populus trichocarpa] gi|222849576|gb|EEE87123.1| predicted protein [Populus trichocarpa]

 Score =  308 bits (788), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 144/184 (78%), Positives = 162/184 (88%), Gaps = 2/184 (1%)

Query: 152 ASSARTASFSEVGFVGWYLAMVKSRPVLTKSATCSLIYIAADLSSQTIA--SSESYDLVR 209
           +S A T+ FS+ GFVGWYL MVKSRPVLTKSAT SLIYIAADLSSQT++  SSE+YDLVR
Sbjct: 1   SSKAGTSEFSKFGFVGWYLGMVKSRPVLTKSATSSLIYIAADLSSQTMSLPSSEAYDLVR 60

Query: 210 TLRMGGYGMLILGPTLHFWFNFVSKLFPKQDLVATLKKMAMGQTIYGPIMTVVFLSLNAS 269
            LRM GYG+LI+GP+LHFWFNFVSKLFPK+DL+ T KK+ MGQTIYGPIMTVVF S NA 
Sbjct: 61  ILRMAGYGLLIIGPSLHFWFNFVSKLFPKRDLITTFKKIIMGQTIYGPIMTVVFFSSNAC 120

Query: 270 LQGESGEEIVARLKRDLLPTMFKGVMYWPVCDFITFRFTPVHLQPLVSNSFSYLWTIYLT 329
           LQGE+  EI+ARLKRDLLPTM  GVMYWPVCDF+TF+F PVHLQPLVSNSFSYLWT+Y+T
Sbjct: 121 LQGENSAEIIARLKRDLLPTMINGVMYWPVCDFVTFKFIPVHLQPLVSNSFSYLWTVYMT 180

Query: 330 YTAS 333
           Y AS
Sbjct: 181 YMAS 184

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255573125|ref|XP_002527492.1| Protein SYM1, putative [Ricinus communis] gi|223533132|gb|EEF34890.1| Protein SYM1, putative [Ricinus communis]

 Score =  306 bits (784), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 158/246 (64%), Positives = 185/246 (75%), Gaps = 13/246 (5%)

Query: 102 TDPVASINSNLLKNQ--------TQSREYFKLADFLRKSTRAYNEVSPYSSLFSSAYAAS 153
           ++P+ +INS +L++Q          SR + KL  F RKS    N  S  SS        S
Sbjct: 22  SEPITTINS-MLRHQKITTNTIIANSRTFLKLPYFFRKSRDFSNGFS--SSPSFFTSPFS 78

Query: 154 SARTASFSEVGFVGWYLAMVKSRPVLTKSATCSLIYIAADLSSQTIAS--SESYDLVRTL 211
           SA  +S     FVGWYL MVK+RP+LTKSATC++IY+AADLSSQTIA   SE YDLVRTL
Sbjct: 79  SASQSSSITASFVGWYLGMVKTRPILTKSATCAVIYVAADLSSQTIARPVSEPYDLVRTL 138

Query: 212 RMGGYGMLILGPTLHFWFNFVSKLFPKQDLVATLKKMAMGQTIYGPIMTVVFLSLNASLQ 271
           RM GYGML+LGPTLHFWFNFVS+ FPK+DL+ T KK+ +GQT+YGP MT +F SLNA LQ
Sbjct: 139 RMAGYGMLVLGPTLHFWFNFVSRQFPKRDLITTFKKIILGQTVYGPAMTALFFSLNACLQ 198

Query: 272 GESGEEIVARLKRDLLPTMFKGVMYWPVCDFITFRFTPVHLQPLVSNSFSYLWTIYLTYT 331
           GE+G EIVARLKRDLLPTM  GVMYWP+CDFITF+F PVHLQPLVSNSFSYLWT+Y+TY 
Sbjct: 199 GENGSEIVARLKRDLLPTMMNGVMYWPICDFITFKFIPVHLQPLVSNSFSYLWTVYMTYM 258

Query: 332 ASLEKA 337
           AS EK 
Sbjct: 259 ASREKV 264

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224056232|ref|XP_002298767.1| predicted protein [Populus trichocarpa] gi|222846025|gb|EEE83572.1| predicted protein [Populus trichocarpa]

 Score =  305 bits (782), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 141/184 (76%), Positives = 161/184 (87%), Gaps = 2/184 (1%)

Query: 152 ASSARTASFSEVGFVGWYLAMVKSRPVLTKSATCSLIYIAADLSSQTIA--SSESYDLVR 209
           +S A  A+F ++GF+GWYL MVKSRP+LTKSAT SLIYIAADLSSQTI+  SSE YDLVR
Sbjct: 1   SSKAENAAFYKIGFIGWYLGMVKSRPILTKSATSSLIYIAADLSSQTISLPSSEPYDLVR 60

Query: 210 TLRMGGYGMLILGPTLHFWFNFVSKLFPKQDLVATLKKMAMGQTIYGPIMTVVFLSLNAS 269
           TLRM GYG+LI+GP+LHFWF FVSKL PK+DL+ T KK+ MGQTIYGPIMTVVF SLNA 
Sbjct: 61  TLRMAGYGLLIVGPSLHFWFKFVSKLLPKRDLITTFKKILMGQTIYGPIMTVVFFSLNAR 120

Query: 270 LQGESGEEIVARLKRDLLPTMFKGVMYWPVCDFITFRFTPVHLQPLVSNSFSYLWTIYLT 329
           LQGE+  EI+ARLKRDL+PTM  GVMYWPVCDF+TF+F PVHLQPLVSNSFSYLWT+Y+T
Sbjct: 121 LQGENSAEIIARLKRDLVPTMINGVMYWPVCDFVTFKFIPVHLQPLVSNSFSYLWTVYMT 180

Query: 330 YTAS 333
           Y AS
Sbjct: 181 YMAS 184

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18418319|ref|NP_567940.1| Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein [Arabidopsis thaliana] gi|11762212|gb|AAG40384.1|AF325032_1 AT4g33900 [Arabidopsis thaliana] gi|332660891|gb|AEE86291.1| Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein [Arabidopsis thaliana]

 Score =  302 bits (773), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 158/241 (65%), Positives = 186/241 (77%), Gaps = 16/241 (6%)

Query: 103 DPVASINSNLLKNQTQSREYFKLADFLRKSTRAYNEVSPYSSLFSSAYAASSARTASFSE 162
           DP+  I  N+   + QSR +++   FL K+      VS + S       +SS+ +++ S 
Sbjct: 32  DPL-PIGGNI--QRLQSRPFYRTPQFLGKAKE--TGVSGFCS-------SSSSSSSTVST 79

Query: 163 VGFVGWYLAMVKSRPVLTKSATCSLIYIAADLSSQTI--ASSESYDLVRTLRMGGYGMLI 220
            GF+GWYL MVKSRPVLTKS T SLIYIAADLSSQTI  AS +SYDLVRT RMGGYG+LI
Sbjct: 80  AGFIGWYLGMVKSRPVLTKSVTSSLIYIAADLSSQTIPQASVDSYDLVRTARMGGYGLLI 139

Query: 221 LGPTLHFWFNFVSKLFPKQDLVATLKKMAMGQTIYGPIMTVVFLSLNASLQGESGEEIVA 280
           LGPTLH+WFN +S LFPK+DL+ T KKMAMGQT+YGP M VVF SLNA+LQGE+G EIVA
Sbjct: 140 LGPTLHYWFNLMSSLFPKRDLITTFKKMAMGQTVYGPAMNVVFFSLNAALQGENGSEIVA 199

Query: 281 RLKRDLLPTMFKGVMYWPVCDFITFRFTPVHLQPLVSNSFSYLWTIYLTYTASLEKAVTT 340
           RLKRDLLPTM  GVMYWP+CDFITF+F PV+LQPLVSNSFSYLWTIY+TY AS  +A  T
Sbjct: 200 RLKRDLLPTMLNGVMYWPLCDFITFKFCPVYLQPLVSNSFSYLWTIYITYMAS--RATPT 257

Query: 341 A 341
           A
Sbjct: 258 A 258

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297798524|ref|XP_002867146.1| hypothetical protein ARALYDRAFT_491288 [Arabidopsis lyrata subsp. lyrata] gi|297312982|gb|EFH43405.1| hypothetical protein ARALYDRAFT_491288 [Arabidopsis lyrata subsp. lyrata]

 Score =  301 bits (772), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 142/180 (78%), Positives = 155/180 (86%), Gaps = 2/180 (1%)

Query: 164 GFVGWYLAMVKSRPVLTKSATCSLIYIAADLSSQTI--ASSESYDLVRTLRMGGYGMLIL 221
           GF+GWYL MVKSRPVLTKS T SLIYIAADLSSQTI  AS ESYDLVRT RM GYG+LIL
Sbjct: 79  GFIGWYLGMVKSRPVLTKSVTSSLIYIAADLSSQTIPQASVESYDLVRTARMAGYGLLIL 138

Query: 222 GPTLHFWFNFVSKLFPKQDLVATLKKMAMGQTIYGPIMTVVFLSLNASLQGESGEEIVAR 281
           GPTLH+WFN +S+LFPK+DL+ T KKMAMGQT+YGP M VVF SLNA+LQGE+G EIVAR
Sbjct: 139 GPTLHYWFNLMSRLFPKRDLITTFKKMAMGQTVYGPAMNVVFFSLNAALQGENGSEIVAR 198

Query: 282 LKRDLLPTMFKGVMYWPVCDFITFRFTPVHLQPLVSNSFSYLWTIYLTYTASLEKAVTTA 341
           LKRDLLPTM  GVMYWP+CDFITF+F PVHLQPLVSNSFSYLWTIY+TY AS  K    A
Sbjct: 199 LKRDLLPTMLNGVMYWPLCDFITFKFFPVHLQPLVSNSFSYLWTIYITYMASRAKPTAIA 258

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356575716|ref|XP_003555983.1| PREDICTED: PXMP2/4 family protein 4-like [Glycine max]

 Score =  300 bits (768), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 138/178 (77%), Positives = 155/178 (87%), Gaps = 2/178 (1%)

Query: 162 EVGFVGWYLAMVKSRPVLTKSATCSLIYIAADLSSQTIA--SSESYDLVRTLRMGGYGML 219
           +VGFV WYL M+KS P+LTKS T SLIYIAADLSSQTI   SSE +D VRT RM GYG++
Sbjct: 72  KVGFVSWYLGMIKSWPILTKSVTSSLIYIAADLSSQTIVRESSEPFDFVRTSRMAGYGIV 131

Query: 220 ILGPTLHFWFNFVSKLFPKQDLVATLKKMAMGQTIYGPIMTVVFLSLNASLQGESGEEIV 279
           ILGP+LHFWFNFVSKLFP++DL +TLKKM MGQT+YGP MTV+F SLNA LQGE+G EI 
Sbjct: 132 ILGPSLHFWFNFVSKLFPRRDLFSTLKKMVMGQTLYGPAMTVIFFSLNARLQGETGSEIA 191

Query: 280 ARLKRDLLPTMFKGVMYWPVCDFITFRFTPVHLQPLVSNSFSYLWTIYLTYTASLEKA 337
           ARLKRDLLPTM  G+MYWP+CDFITFRF PVHLQPLVSNSFSYLWT+Y+TY ASLEKA
Sbjct: 192 ARLKRDLLPTMLSGIMYWPICDFITFRFIPVHLQPLVSNSFSYLWTVYITYMASLEKA 249

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363806776|ref|NP_001242024.1| uncharacterized protein LOC100810534 [Glycine max] gi|255639865|gb|ACU20225.1| unknown [Glycine max]

 Score =  300 bits (768), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 138/178 (77%), Positives = 154/178 (86%), Gaps = 2/178 (1%)

Query: 162 EVGFVGWYLAMVKSRPVLTKSATCSLIYIAADLSSQTIA--SSESYDLVRTLRMGGYGML 219
           +VGFVGWYL M+KS P+LTKS T SLIYIA DLSSQTI   SSE +D +RT RM GYGM+
Sbjct: 70  KVGFVGWYLGMIKSWPILTKSVTSSLIYIATDLSSQTIVRESSEPFDFIRTSRMAGYGMV 129

Query: 220 ILGPTLHFWFNFVSKLFPKQDLVATLKKMAMGQTIYGPIMTVVFLSLNASLQGESGEEIV 279
           ILGP+LHFWFNFVSKLFP++DL +TLKKM MGQT+YGP MTV F SLNA LQGE+G EI 
Sbjct: 130 ILGPSLHFWFNFVSKLFPRRDLFSTLKKMVMGQTLYGPAMTVTFFSLNARLQGETGSEIA 189

Query: 280 ARLKRDLLPTMFKGVMYWPVCDFITFRFTPVHLQPLVSNSFSYLWTIYLTYTASLEKA 337
           ARLKRDLLPTM  G+MYWP+CDFITFRF PVHLQPLVSNSFSYLWT+Y+TY ASLEKA
Sbjct: 190 ARLKRDLLPTMLSGIMYWPICDFITFRFIPVHLQPLVSNSFSYLWTVYITYMASLEKA 247

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449469120|ref|XP_004152269.1| PREDICTED: PXMP2/4 family protein 4-like [Cucumis sativus] gi|449484330|ref|XP_004156853.1| PREDICTED: PXMP2/4 family protein 4-like [Cucumis sativus]

 Score =  289 bits (740), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 157/271 (57%), Positives = 197/271 (72%), Gaps = 17/271 (6%)

Query: 72  MRGVLKRNGTVSQLLQSHGGVNNKKITDVFTDPVASINSNLLKNQTQS-REYFKLADFLR 130
           M G L+R+  +S LL      + +  + +     A   + +++ Q Q  R YF+L D  R
Sbjct: 1   MIGALRRSSGISGLL------HFRHFSHLKGSKAAFEATAIVRKQNQPIRPYFRLPDSFR 54

Query: 131 KSTRAYNEVSPYSSLFSSAYAASSARTASFSEVGFVGWYLAMVKSRPVLTKSATCSLIYI 190
           K+     EV     +FSS   +S++   S  +V F+ WYLAM+K RPVLTKS T ++IY 
Sbjct: 55  KA----KEVG----VFSSGQHSSASSFFSIVKVEFLEWYLAMIKCRPVLTKSITSAIIYT 106

Query: 191 AADLSSQTIASS--ESYDLVRTLRMGGYGMLILGPTLHFWFNFVSKLFPKQDLVATLKKM 248
           AADLSSQTI+ S  ESYDL+RT+RM GYGML+LGP+LH+WFN +SKLFP++DL +T KKM
Sbjct: 107 AADLSSQTISLSSSESYDLIRTVRMAGYGMLVLGPSLHYWFNLMSKLFPQKDLFSTFKKM 166

Query: 249 AMGQTIYGPIMTVVFLSLNASLQGESGEEIVARLKRDLLPTMFKGVMYWPVCDFITFRFT 308
           AMGQ ++GP MT +F SLNA LQGESG EI+ARLKRDLLPTM  GVMYWPVCDFITFRF 
Sbjct: 167 AMGQGLFGPFMTAIFFSLNAFLQGESGAEIIARLKRDLLPTMLNGVMYWPVCDFITFRFV 226

Query: 309 PVHLQPLVSNSFSYLWTIYLTYTASLEKAVT 339
           PVHLQ LVSNSFSY+WT+Y+TY ASLEKAV+
Sbjct: 227 PVHLQALVSNSFSYVWTVYMTYMASLEKAVS 257

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	342
TAIR|locus:2060459	252	AT2G14860 "AT2G14860" [Arabido	0.526	0.714	0.785	3.9e-76
TAIR|locus:505006551	261	AT4G33905 [Arabidopsis thalian	0.657	0.862	0.630	3.1e-74
TAIR|locus:2167816	254	AT5G43140 "AT5G43140" [Arabido	0.505	0.681	0.571	1.8e-55
TAIR|locus:2183244	288	AT5G19750 "AT5G19750" [Arabido	0.494	0.586	0.327	1.4e-23
DICTYBASE|DDB_G0290631	185	DDB_G0290631 "pmp22 family pro	0.418	0.772	0.317	2.7e-20
DICTYBASE|DDB_G0290223	184	DDB_G0290223 "pmp22 family pro	0.488	0.907	0.282	2.5e-19
DICTYBASE|DDB_G0277335	202	DDB_G0277335 "pmp22 family pro	0.467	0.792	0.323	6.5e-19
FB|FBgn0037292	193	CG2022 [Drosophila melanogaste	0.461	0.818	0.279	1.3e-16
ASPGD|ASPL0000057632	252	AN1247 [Emericella nidulans (t	0.377	0.511	0.328	2.9e-15
FB|FBgn0026872	196	CG14777 [Drosophila melanogast	0.459	0.801	0.289	4.5e-15

TAIR|locus:2060459 AT2G14860 "AT2G14860" [Arabidopsis thaliana (taxid:3702)]

 Score = 767 (275.1 bits), Expect = 3.9e-76, P = 3.9e-76
 Identities = 143/182 (78%), Positives = 160/182 (87%)

Query:   163 VGFVGWYLAMVKSRPVLTKSATCSLIYIAADLSSQTIA--SSESYDLVRTLRMGGYGMLI 220
             +GFVGWYL MVKS PV+TKS T SLIYIAADLSSQTIA  SSESYDLVRT RMGGYG+ +
Sbjct:    71 IGFVGWYLGMVKSHPVVTKSVTSSLIYIAADLSSQTIAKTSSESYDLVRTARMGGYGLFV 130

Query:   221 LGPTLHFWFNFVSKLFPKQDLVATLKKMAMGQTIYGPIMTVVFLSLNASLQGESGEEIVA 280
             LGPTLH+WFNF+S+LFPKQDL+ T KKMAMGQTIYGPIMTV+F SLNASLQGE G  I+A
Sbjct:   131 LGPTLHYWFNFMSRLFPKQDLITTFKKMAMGQTIYGPIMTVIFFSLNASLQGERGSVILA 190

Query:   281 RLKRDLLPTMFKGVMYWPVCDFITFRFTPVHLQPLVSNSFSYLWTIYLTYTASLEKAVTT 340
             RLKRDLLP +F GVMYWP+CDFITFRF PVHLQPLVSNSFSY+WTIY+TY A+ EK V  
Sbjct:   191 RLKRDLLPALFNGVMYWPLCDFITFRFFPVHLQPLVSNSFSYVWTIYMTYMANREKPVAI 250

Query:   341 AS 342
             ++
Sbjct:   251 ST 252

GO:0005778 "peroxisomal membrane" evidence=ISS

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:505006551 AT4G33905 [Arabidopsis thaliana (taxid:3702)]

 Score = 749 (268.7 bits), Expect = 3.1e-74, P = 3.1e-74
 Identities = 152/241 (63%), Positives = 174/241 (72%)

Query:   103 DPVASINSNLLKNQTQSREYFKLADFLRKSTRAYNEVXXXXXXXXXXXXXXXXXXXXXXE 162
             DP+  I  N+   + QSR +++   FL K+                              
Sbjct:    32 DPLP-IGGNI--QRLQSRPFYRTPQFLGKAKET---------GVSGFCSSSSSSSSTVST 79

Query:   163 VGFVGWYLAMVKSRPVLTKSATCSLIYIAADLSSQTI--ASSESYDLVRTLRMGGYGMLI 220
              GF+GWYL MVKSRPVLTKS T SLIYIAADLSSQTI  AS +SYDLVRT RMGGYG+LI
Sbjct:    80 AGFIGWYLGMVKSRPVLTKSVTSSLIYIAADLSSQTIPQASVDSYDLVRTARMGGYGLLI 139

Query:   221 LGPTLHFWFNFVSKLFPKQDLVATLKKMAMGQTIYGPIMTVVFLSLNASLQGESGEEIVA 280
             LGPTLH+WFN +S LFPK+DL+ T KKMAMGQT+YGP M VVF SLNA+LQGE+G EIVA
Sbjct:   140 LGPTLHYWFNLMSSLFPKRDLITTFKKMAMGQTVYGPAMNVVFFSLNAALQGENGSEIVA 199

Query:   281 RLKRDLLPTMFKGVMYWPVCDFITFRFTPVHLQPLVSNSFSYLWTIYLTYTASLEKAVTT 340
             RLKRDLLPTM  GVMYWP+CDFITF+F PV+LQPLVSNSFSYLWTIY+TY AS  +A  T
Sbjct:   200 RLKRDLLPTMLNGVMYWPLCDFITFKFCPVYLQPLVSNSFSYLWTIYITYMAS--RATPT 257

Query:   341 A 341
             A
Sbjct:   258 A 258

GO:0005739 "mitochondrion" evidence=ISM

GO:0005778 "peroxisomal membrane" evidence=ISS

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

GO:0009694 "jasmonic acid metabolic process" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

TAIR|locus:2167816 AT5G43140 "AT5G43140" [Arabidopsis thaliana (taxid:3702)]

 Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
 Identities = 100/175 (57%), Positives = 139/175 (79%)

Query:   165 FVGWYLAMVKSRPVLTKSATCSLIYIAADLSSQ--TIASSESYDLVRTLRMGGYGMLILG 222
             F+ WYL  ++S P +TKS T S+IY+AADL+SQ  T+  + S+DL+RT RM  +G++ LG
Sbjct:    78 FLRWYLRKLESHPFMTKSITTSVIYMAADLTSQMITMEPTGSFDLIRTARMASFGLIFLG 137

Query:   223 PTLHFWFNFVSKLFPKQDLVATLKKMAMGQTIYGPIMTVVFLSLNASLQGESGEEIVARL 282
             P+ H WF+++SK+ PK+D++ T KK+ MGQ ++GP+   VF S NA+LQGE+ EEIVARL
Sbjct:   138 PSQHLWFSYLSKILPKRDVLTTFKKIMMGQVLFGPVSNTVFYSYNAALQGENSEEIVARL 197

Query:   283 KRDLLPTMFKGVMYWPVCDFITFRFTPVHLQPLVSNSFSYLWTIYLTYTASLEKA 337
             KRDLLPT+  G+MYWPVCDF+TF++ PVHLQPL+++S +Y+WTIYLTY A+  KA
Sbjct:   198 KRDLLPTLKNGLMYWPVCDFVTFKYVPVHLQPLMNSSCAYIWTIYLTYMANQTKA 252

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0005778 "peroxisomal membrane" evidence=ISS

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2183244 AT5G19750 "AT5G19750" [Arabidopsis thaliana (taxid:3702)]

 Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
 Identities = 56/171 (32%), Positives = 93/171 (54%)

Query:   166 VGWYLAMVKSRPVLTKSATCSLIYIAADLSSQ-TIASSESYDLVRTLRMGGYGMLILGPT 224
             + WY A++ + PVLTK+ T +L+ +  DL  Q TI  + S D  RTL     G+ ++GPT
Sbjct:   115 LSWYQALLSNSPVLTKAVTAALLNLVGDLICQLTINKTSSLDKKRTLTFTFLGLGLVGPT 174

Query:   225 LHFWFNFVSKLFPKQDLVATLKKMAMGQTIYGPIMTVVFLSLNASLQGESGEEIVARLKR 284
             LHFW+ ++SK+     L   + ++ + Q ++ PI   VFLS   +L+G+    ++ +L++
Sbjct:   175 LHFWYLYLSKVVTASGLSGAVIRLLLDQFVFAPIFVGVFLSAVVTLEGKPSN-VIPKLQQ 233

Query:   285 DLLPTMFKGVMYWPVCDFITFRFTPVHLQPLVSNSFSYLWTIYLTYTASLE 335
             +    M      W    F+ FRF P + Q L SN  +  W + L++ A  E
Sbjct:   234 EWTGAMIANWQLWIPFQFLNFRFVPQNYQVLASNVVALAWNVILSFKAHKE 284

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0005778 "peroxisomal membrane" evidence=ISS

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

DICTYBASE|DDB_G0290631 DDB_G0290631 "pmp22 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
 Identities = 47/148 (31%), Positives = 79/148 (53%)

Query:   169 YLAMVKSRPVLTKSATCSLIYIAADLSSQTIASS----ESYDLVRTLRMGGYGMLILGPT 224
             YL+ +   PV TK+ T   +Y+ +D   Q I  S    + YD  R++RM  +G  + GP 
Sbjct:    15 YLSQLHKYPVATKAVTSGFLYLISDSLVQGIELSRDKDKKYDFKRSMRMAVFGFAVTGPL 74

Query:   225 LHFWFNFVSKLFPKQDLVATLKKMAMGQTIYGPIMTVVFLSLNASLQGESGEEIVARLKR 284
              H+WF ++ K FPK+       K+ + Q +  P+   +F S    L+G+S ++IV +LK+
Sbjct:    75 FHYWFKYLDKHFPKKSYRHAFIKLTIDQVVCSPVFNFLFFSGMGILEGKSKDDIVEKLKK 134

Query:   285 DLLPTMFKGVMYWPVCDFITFRF-TPVH 311
             D L T     + WP  +F+ F + + +H
Sbjct:   135 DWLTTYVSDCVVWPFINFVNFAYISSIH 162

GO:0016021 "integral to membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA

DICTYBASE|DDB_G0290223 DDB_G0290223 "pmp22 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
 Identities = 48/170 (28%), Positives = 88/170 (51%)

Query:   168 WYLAMVKSRPVLTKSATCSLIYIAADLSSQTIASSESYDLVRTLRMGGYGMLILGPTLHF 227
             WY+  +KS+P+ TK+ T + +   + + +Q     +  +    ++   +G LI  P +H+
Sbjct:    16 WYMKKLKSKPIQTKALTSATLSFISSVVAQKFIEKKKINWNAVVKFTVWG-LISSPLVHY 74

Query:   228 WFNFVSKLFPK-QDLVATLKKMAMGQTIYGPIMTVVFLSLNASLQGESGEEIVARLKRDL 286
             W   + +LF   +D   +  K+ + Q ++ P + + F S+ A L G+  + I+ +L  DL
Sbjct:    75 WHIILDRLFKNIKDKYQSWGKLIVDQLVFAPFINIAFYSVLAILDGKP-KSILFKLYFDL 133

Query:   287 LPTMFKGVMYWPVCDFITFRFTPVHLQPLVSNSFSYLWTIYLTYTASLEK 336
              PT+      WP+   I FRF P HL+ L  N   + W IYL+  A+ ++
Sbjct:   134 FPTLKASWKVWPLAQLINFRFVPSHLRVLFGNLVGFCWGIYLSILATKKR 183

GO:0016021 "integral to membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

DICTYBASE|DDB_G0277335 DDB_G0277335 "pmp22 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
 Identities = 53/164 (32%), Positives = 85/164 (51%)

Query:   169 YLAMVKSRPVLTKSATCSLIYIAADLSSQTIASSESYDLVRTLRMGGYGMLILGPTLHFW 228
             Y   +++RPV+TKS T ++++   D  +Q I  +  YD  RTL M   G  I+ P +HFW
Sbjct:    13 YKKSLQNRPVITKSLTGTVVFFLGDTLAQKI-ENRGYDPKRTLMMCTVGTFIVVPQIHFW 71

Query:   229 FNFVSKLFPKQDLVATLKKMAMGQTIYGPIMTVVFL-SLNASLQGESGE--EIVARLKRD 285
             F F+ K F K      + K+ + Q  +GP + V  + S+    QG + +  +   ++K+D
Sbjct:    72 FKFLDKTFTKPGWAGAIPKVVVDQLTFGPYLFVCNMTSVQLFHQGFNFDTHQWKDKMKKD 131

Query:   286 LLPTMFKGVMYWPVCDFITFRFTPVHLQPLVSNSFSYLWTIYLT 329
               P + K  M WP+ + I FRF     + L+SN  S  W   L+
Sbjct:   132 FFPVLQKAWMIWPLTNCILFRFVHPDYRILISNLVSVGWNCILS 175

GO:0016021 "integral to membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA

FB|FBgn0037292 CG2022 [Drosophila melanogaster (taxid:7227)]

 Score = 206 (77.6 bits), Expect = 1.3e-16, P = 1.3e-16
 Identities = 45/161 (27%), Positives = 74/161 (45%)

Query:   178 VLTKSATCSLIYIAADLSSQTIASSES---YDLVRTLRMGGYGMLILGPTLHFWFNFVSK 234
             VL    +   ++    L  QT+   ++   YD ++ LR   +G   +GPT++ W    S 
Sbjct:    14 VLRGMISYGTLWPCGSLIEQTMIEKKTFRTYDWMKCLRFSLFGFFFMGPTIYVWIRLASV 73

Query:   235 LFPKQDLVATLKKMAMGQTIYGPIMTVVFLSLNASLQGESGEEIVARLKRDLLPTMFKGV 294
             ++P+ D+ ++L K    QT Y P+    FL     ++G S  E    +    L     GV
Sbjct:    74 MWPRTDIKSSLCKAITEQTAYDPMAISSFLFFMTLMEGNSYAEAKREVSDKFLDAYKVGV 133

Query:   295 MYWPVCDFITFRFTPVHLQPLVSNSFSYLWTIYLTYTASLE 335
             +YWP    + F F P   Q + ++ FS  WT +L Y   L+
Sbjct:   134 IYWPCVQTVNFAFVPARNQVVFTSFFSMCWTTFLAYVKFLQ 174

GO:0005778 "peroxisomal membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

ASPGD|ASPL0000057632 AN1247 [Emericella nidulans (taxid:162425)]

 Score = 183 (69.5 bits), Expect = 2.9e-15, Sum P(2) = 2.9e-15
 Identities = 45/137 (32%), Positives = 66/137 (48%)

Query:   205 YDLVRTLRMGGYGMLILGPTLHFWFNFVSKLFP---KQDLVATLKKMAMGQTIYGPIMTV 261
             +D  R +R   YG   + P    WF F+S+ FP   K    + LK++A  Q ++ P   V
Sbjct:   118 FDFERLIRFMSYGFF-MAPIQFQWFGFLSRTFPLAKKNPTFSALKRVACDQLLFAPFGLV 176

Query:   262 VFLSLNASLQGESGEEIVARLKRDL-LPTMFKGVMYWPVCDFITFRFTPVHLQ-PLVSNS 319
              F S     +G  G+  + R  +D+ LPT+    + WP    + FR  P+  Q P VS S
Sbjct:   177 CFFSYMTIAEG-GGKRALTRKFQDVYLPTLKANFVLWPAVQVLNFRVVPIQFQIPFVS-S 234

Query:   320 FSYLWTIYLTYTASLEK 336
                 WT YL+ T S E+
Sbjct:   235 VGIAWTAYLSLTNSAEE 251

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

GO:0000324 "fungal-type vacuole" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

FB|FBgn0026872 CG14777 [Drosophila melanogaster (taxid:7227)]

 Score = 193 (73.0 bits), Expect = 4.5e-15, P = 4.5e-15
 Identities = 46/159 (28%), Positives = 73/159 (45%)

Query:   174 KSRPVLTKSATCSLIYIAADLSSQTIASSE--SYDLVRTLRMGGYGMLILGPTLHFWFNF 231
             K  P+   + T ++++ A  L  Q +   +   YD  R LR   +G L + PTL+ W   
Sbjct:    21 KLHPMAKGALTYAVMWPAGSLIQQAMEGRKLREYDWARALRFSLFGALYVAPTLYGWVRL 80

Query:   232 VSKLFPKQDLVATLKKMAMGQTIYGPIMTVVFLSLNASLQGESGEEIVARLKRDLLPTMF 291
              S ++P+ +L   + K    Q  YGP   V F    + L+ ++  + V   K    PT  
Sbjct:    81 TSAMWPQTNLRTGIVKAITEQLSYGPFACVSFFMGMSLLELKTFSQAVEETKEKAAPTYK 140

Query:   292 KGVMYWPVCDFITFRFTPVHLQPLVSNSFSYLWTIYLTY 330
              GV  WP+   I F   P H + +  +  S +WTI+L Y
Sbjct:   141 VGVCIWPILQTINFSLVPEHNRVVFVSICSLMWTIFLAY 179

GO:0016021 "integral to membrane" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh2_kg.3__3075__AT2G14860.1 annotation not avaliable (248 aa) (Arabidopsis lyrata)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	342
pfam04117	68	pfam04117, Mpv17_PMP22, Mpv17 / PMP22 family	2e-17

>gnl|CDD|202894 pfam04117, Mpv17_PMP22, Mpv17 / PMP22 family

 Score = 75.3 bits (186), Expect = 2e-17
 Identities = 25/67 (37%), Positives = 32/67 (47%)

Query: 267 NASLQGESGEEIVARLKRDLLPTMFKGVMYWPVCDFITFRFTPVHLQPLVSNSFSYLWTI 326
              L+G+S EEI  +LK    PT+      WP   FI F F PVH + L  N     W  
Sbjct: 1   MGLLEGKSLEEIKEKLKEKFWPTLKANWKVWPPVQFINFAFVPVHYRVLFVNLVGIGWNT 60

Query: 327 YLTYTAS 333
           YL+Y  +
Sbjct: 61  YLSYVNN 67

The 22-kDa peroxisomal membrane protein (PMP22) is a major component of peroxisomal membranes. PMP22 seems to be involved in pore forming activity and may contribute to the unspecific permeability of the organelle membrane. PMP22 is synthesised on free cytosolic ribosomes and then directed to the peroxisome membrane by specific targeting information. Mpv17 is a closely related peroxisomal protein. In mouse, the Mpv17 protein is involved in the development of early-onset glomerulosclerosis. More recently a homolog of Mpv17 in S. cerevisiae has been been found to be an integral membrane protein of the inner mitochondrial membrane where it has been proposed to have a role in ethanol metabolism and tolerance during heat-shock. Defects in MPV17 is associated with mitochondrial DNA depletion syndrome (MDDS) and Navajo neurohepatopathy (NNH). MDDS is a clinically heterogeneous group of disorders characterized by a reduction in mitochondrial DNA (mtDNA) copy number. Primary mtDNA depletion is inherited as an autosomal recessive trait and may affect single organs, typically muscle or liver, or multiple tissues. Individuals with the hepatocerebral form of mitochondrial DNA depletion syndrome have early progressive liver failure and neurologic abnormalities, hypoglycemia, and increased lactate in body fluids. NNH is an autosomal recessive disease that is prevalent among Navajo children in the South Western states of America. The major clinical features are hepatopathy, peripheral neuropathy, corneal anesthesia and scarring, acral mutilation, cerebral leukoencephalopathy, failure to thrive, and recurrent metabolic acidosis with intercurrent infections. Infantile, childhood, and classic forms of NNH have been described. Mitochondrial DNA depletion was detected in the livers of patients, suggesting a primary defect in mtDNA maintenance. Length = 68

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	342
KOG1944	222	consensus Peroxisomal membrane protein MPV17 and r	100.0
PF04117	68	Mpv17_PMP22: Mpv17 / PMP22 family ; InterPro: IPR0	99.86

>KOG1944 consensus Peroxisomal membrane protein MPV17 and related proteins [General function prediction only]

Probab=100.00  E-value=1.7e-38  Score=294.61  Aligned_cols=173  Identities=42%  Similarity=0.782  Sum_probs=162.4

Q ss_pred             HHHHHHHHH-HhhCChhHHHHHHHHHH-HHHHHHHHhhc--C---CCCccHHHHHHHHhhhhhhhhhhHhHHHHHHhhhC
Q 019357          164 GFVGWYLAM-VKSRPVLTKSATCSLIY-IAADLSSQTIA--S---SESYDLVRTLRMGGYGMLILGPTLHFWFNFVSKLF  236 (342)
Q Consensus       164 ~lla~Y~~~-L~r~PLlTKsvTsgvL~-~lGDviAQ~I~--~---~~~~D~~Rt~rfal~G~~~~GPl~H~WY~~Ldrlf  236 (342)
                      ++..|+... ...+|+++++++.+.+. .+||+++|.++  .   .+.+|+.|++||+++|+++.||..|+||..||+++
T Consensus        36 ~l~~~~~~~~~~~~~~l~~~i~~~~~~~~~~d~~~q~~~~~~~~~~~~~d~~rtlr~~~~G~~f~gp~~~~Wy~~L~~~~  115 (222)
T KOG1944|consen   36 GLVLWLLLKRFSLYPLLTKAITTSLLLAAAGDVISQSLEGRSKKLFQTLDLTRTLRMGIFGFLFVGPTLHYWYRLLSKLF  115 (222)
T ss_pred             hhhhhhhhhhhhhhhHHHHHHHHHHHHHHhchhhhhhhhhhcccccccccHHHHHHHHhhhhheeccchhHHHHHHHHHc
Confidence            355555443 56799999999999988 99999999998  2   46799999999999999999999999999999999


Q ss_pred             CCchhHHHHHHHHhhhhhhhhHHHHHHHHHHhhhcCCChHHHHHHHhhchHHHHhhccccchHHHhhhhceecCCcchhh
Q 019357          237 PKQDLVATLKKMAMGQTIYGPIMTVVFLSLNASLQGESGEEIVARLKRDLLPTMFKGVMYWPVCDFITFRFTPVHLQPLV  316 (342)
Q Consensus       237 P~~~l~tvlkKVllDQlVfaPl~~~~Ff~~~~lLeG~S~~~i~~kLk~dy~~tl~asw~VWPpaq~INF~fVP~~~RVLf  316 (342)
                      |.+++.++++|+++||++++|+.+.+||.+++++||++.+++.++++++++|+++++|++||++|+|||+|||+++|++|
T Consensus       116 p~~~~~~~~~kvl~dql~~~P~~~~~ff~~~~~legk~~~~~~~~~~~~~~p~l~~~~~~WP~~q~inF~~VP~~~rvl~  195 (222)
T KOG1944|consen  116 PKKTLITVVKKVLLDQLVFAPLFIVVFFLLMGLLEGKTNEEAKAKLKRKFWPTLKANWMVWPLVQFINFRLVPLQYRVLF  195 (222)
T ss_pred             cCccHHHHHHHHHHhhhhhchHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhhhheecchhheeeeEEccccceehh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHhcccc
Q 019357          317 SNSFSYLWTIYLTYTASLEK  336 (342)
Q Consensus       317 vN~Vs~~WniYLS~ma~r~~  336 (342)
                      +|+++++||+|||+++++..
T Consensus       196 ~~~vsl~W~~~Ls~~~~~~~  215 (222)
T KOG1944|consen  196 VNIVSLVWNTYLSYKNASLV  215 (222)
T ss_pred             hhhHHHHHHHHHHHHhhccc
Confidence            99999999999999999884

>PF04117 Mpv17_PMP22: Mpv17 / PMP22 family ; InterPro: IPR007248 The 22 kDa peroxisomal membrane protein (PMP22) is a major component of peroxisomal membranes

Probab=99.86  E-value=1.3e-22  Score=155.77  Aligned_cols=68  Identities=38%  Similarity=0.745  Sum_probs=66.5

Q ss_pred             HhhhcCCChHHHHHHHhhchHHHHhhccccchHHHhhhhceecCCcchhhHhHHHHHHHHHHHHHhcc
Q 019357          267 NASLQGESGEEIVARLKRDLLPTMFKGVMYWPVCDFITFRFTPVHLQPLVSNSFSYLWTIYLTYTASL  334 (342)
Q Consensus       267 ~~lLeG~S~~~i~~kLk~dy~~tl~asw~VWPpaq~INF~fVP~~~RVLfvN~Vs~~WniYLS~ma~r  334 (342)
                      |+++||+++++++++++++|+++++++|++|||+|++||.|||+++|++|+|+|+++||+|||+++||
T Consensus         1 Mg~l~g~s~~~~~~~l~~~~~~~~~~~~~~Wp~~~~vnF~~vP~~~Rv~~~~~v~~~W~~~LS~~~~r   68 (68)
T PF04117_consen    1 MGLLEGKSWEEIKEKLKRDYWPTLKASWKFWPPAQIVNFRYVPPHYRVLFVNVVSFFWNTYLSYIANR   68 (68)
T ss_pred             CCcccCCCHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHhcccChhhhhhhhhhHHHHHHHHHHHHhcC
Confidence            67999999999999999999999999999999999999999999999999999999999999999986

PMP22 seems to be involved in pore-forming activity and may contribute to the unspecific permeability of the organelle membrane. PMP22 is synthesised on free cytosolic ribosomes and then directed to the peroxisome membrane by specific targeting information []. Mpv17 is a closely related peroxisomal protein involved in the development of early-onset glomerulosclerosis []. A member of this family found in Saccharomyces cerevisiae (Baker's yeast) is an integral membrane protein of the inner mitochondrial membrane and has been suggested to play a role in mitochondrial function during heat shock [].; GO: 0016021 integral to membrane

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00