Citrus Sinensis ID: 019383

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340--
Protein Sequence
MEEQAENRNKRKLNIDWEEVLPGRNDDVPAELIVKKSGPPTPAQKSVPMSDDPGSGEELDRQIPDQELGVRIARMKDTYSKVRHCLPDKGKKILATVTRLEKECERRRLAGAVPVCLDIDGCDKLTQSPSSDCFTQRTPSPQIQSKSSFTSVFREKMEENRDCREANAFDKELSILAHCDRRKMRSDGDLSQRGRQNVRSSSRKWPFHKGDKSFNSNGSQKDRASLTCPSHQSGENSSSCLPKKKESFEVLPSKNPRLRKEQNLVLLDEDESPVEDASEESEGSLHIETTEQADEFAECMIDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIR
Secondary Structure (PSIPRED)
cHHHHHHcccccccccccccccccccccccEEEEcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccccccccccccccccccHHHHHHHHHccccEEEcccccccccEEEEccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHcccccccEEcHHHcccccccccccEEEEEcccccccccccccccccccccHHHcccccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHcccccccccccccccHHHcccccccccccccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccHcccccccccccccccccccccccccccccccEEEEEccccccccccccccccccccccccHHHHHHHHHHcccEEccccccccEEEEEHHHHHccccHHHccccEEEEEEc
Coil and Loop (DISEMBL)
MEEQAENRNkrklnidweevlpgrnddvpaelivkksgpptpaqksvpmsddpgsgeeldrqipdqELGVRIARMKDTYSkvrhclpdkgkKILATVTRLEKECERRrlagavpvcldidgcdkltqspssdcftqrtpspqiqskssFTSVFREKMEENRDCREANAFDKELSILAhcdrrkmrsdgdlsqrgrqnvrsssrkwpfhkgdksfnsngsqkdrasltcpshqsgensssclpkkkesfevlpsknprlrkeqnlvlldedespvedaseesegslhietTEQADEFAECMIdakiyypsrvdpesveicytdinhlapaayltspimnfyir
Flexible Loop (DISEMBL)
meeqaenrnkrklnidweevlpgrnDDVPAELIVKksgpptpaqksvpmsddpgsgeeldrqipdqeLGVRIARMKdtyskvrhclpdkgkkilATVTRLEKEcerrrlagavpvcLDIDGCDKLTQSPSSDcftqrtpspqiqskssftSVFREKMEENrdcreanafdkelsilahcdrrkmrsdgdlsqrgrqnvrsssrkwpfhkgdksfnsngsqKDRASltcpshqsgensssclpkkkesfevlpsknprlrkeqnlvlldedespvedaseesegslhiETTEQADEFAECMIDAKIYYPSRVDPESVEICYTDINHlapaayltspimnfyir
Low Complexity Region (SEG)
MEEQAENRNKRKLNIDWEEVLPGRNDDVPAELIVKKSGPPTPAQKSVPMSDDPGSGEELDRQIPDQELGVRIARMKDTYSKVRHCLPDKGKKILATVTRLEKECERRRLAGAVPVCLDIDGCDKLTQSPSSDCFTQRTPSPQIQSKSSFTSVFREKMEENRDCREANAFDKELSILAHCDRRKMRSDGDLSQRGRQNVRSSSRKWPFHKGDKSFNSNGSQKDRASLTCPSHQSGENSSSCLPKKKESFEVLPSKNPRLRKEQNLVLLDEDESPVEDASEESEGSLHIETTEQADEFAECMIDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIR
Disordered region (IsUnstruct)
********************************************************************GVRIARMKDTYSKVRHCLPDKGKKILATVTRLEKECERRRLAGAVPVCLDIDGCDKL*************************************************************************************************************************************************************************EFAECMIDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYI*
Disordered Region (DISOPRED)
***************DWEEVLPGRNDDVP***************************************************KVRHCLPDKGKKILATVTR*********************************************************************************************************************************************************************VLLDEDES***************************MIDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIR
Disordered Region (DISEMBL)
**********RKLNIDWEEVLPGRNDDVPAELIVKKSG*********************DRQIPDQELGVRIARMKDTYSKVRHCLPDKGKKILATVTRLEKECERRRLAGAVPVCLDIDGCDKLTQS*******************SFTSVFREKMEENRDCREANAFDKELSILAHCDRR**********************WPFHKGDKSF***************************PKKKESFEVLPSKNPRLRKEQNLVLLD******************IETTEQADEFAECMIDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIR
Disordered Region (DISPRO)
**********RKLNIDWEEVLPGRNDDVPAELIVKKS************************QIPDQELGVRIARMKDTYSKVRHCLPDKGKKILATVTRLEKECERRRLA********************************************************N**********************************************************************************************QNL***DE*******************TTEQADEFAECMIDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIR
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEEQAENRNKRKLNIDWEEVLPGRNDDVPAELIVKKSGPPTPAQKSVPMSDDPGSGEELDRQIPDQELGVRIARMKDTYSKVRHCLPDKGKKILATVTRLEKECERRRLAGAVPVCLDIDGCDKLTQSPSSDCFTQRTPSPQIQSKSSFTSVFREKMEENRDCREANAFDKELSILAHCDRRKMRSDGDLSQRGRQNVRSSSRKWPFHKGDKSFNSNGSQKDRASLTCPSHQSGENSSSCLPKKKESFEVLPSKNPRLRKEQNLVLLDEDESPVEDASEESEGSLHIETTEQADEFAECMIDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	342	2.2.26 [Sep-21-2011]
Q2PS26	584	Ubiquitin-like-specific p	yes	no	0.891	0.522	0.277	3e-14
Q8RWN0	571	Ubiquitin-like-specific p	no	no	0.856	0.513	0.257	2e-07

>sp|Q2PS26|ULP1D_ARATH Ubiquitin-like-specific protease 1D OS=Arabidopsis thaliana GN=ULP1D PE=1 SV=1

 Score = 79.7 bits (195), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 160/382 (41%), Gaps = 77/382 (20%)

Query: 10  KRKLNIDWEEVLPGRNDDVPAELIVKKSGPPTPAQKSVPMSDDPGSGEELDRQIPDQELG 69
           K+   IDW   +  + D+VP EL +  +  PTP       SDD     +L   + D++L 
Sbjct: 16  KKDFVIDWSSAM-DKEDEVP-ELEIVNTTKPTPPPPPTFFSDDQTDSPKL---LTDRDLD 70

Query: 70  VRIARMKDTYSKVRHCLPDKGKKILATVTRLEKECERRRLAGA----------------- 112
            ++ R K   + +   LPDKG+KI   +  LE+E +RR L G+                 
Sbjct: 71  EQLERKKAILT-LGPGLPDKGEKIRLKIADLEEEKQRRVLEGSKMEVDRSSKVVSSTSSG 129

Query: 113 ---VPVCLDIDGCDKLTQSPSSDCFTQRTPSPQIQSKSSFTSVFREKMEENRDCREANAF 169
              +P    +        + S D   Q     +  S+S+F++VF +      D +   AF
Sbjct: 130 SDVLPQGNAVSKDTSRGNADSKDTSRQGNADSKEVSRSTFSAVFSK---PKTDSQSKKAF 186

Query: 170 DKELSILAHCDRRKMRSDGDLSQRGRQNVRSSSRKW--------------PFHKGDKSFN 215
            KEL  L  C+RRK ++       GR+ V   S  W               F  G K   
Sbjct: 187 GKELEDLG-CERRKHKA-------GRKPVTRLSNGWRLLPDVGKAEHSAKQFDSGLKESK 238

Query: 216 SNGSQKDRASLTCPSHQSGEN---------------SSSCLPKKKESFEVLPSKNPRLRK 260
            N   K+      P   S  +               +S     ++ S+E  PS++ R RK
Sbjct: 239 GNKKSKEPYGKKRPMESSTYSLIDDDDDDDDDDDNDTSGHETPREWSWEKSPSQSSRRRK 298

Query: 261 EQNLVLLDEDESPVEDASEESEGSLHIETTEQADEFAECMIDAKIYYPSRVDPESVEICY 320
           +    +++ DE       EE++ S      EQA E  E +    I YP+R DP  V++C 
Sbjct: 299 KSEDTVINVDE-------EEAQPST---VAEQAAELPEGL-QEDICYPTRDDPHFVQVCL 347

Query: 321 TDINHLAPAAYLTSPIMNFYIR 342
            D+  LAP  YLTSP+MNFY+R
Sbjct: 348 KDLECLAPREYLTSPVMNFYMR 369

Protease that catalyzes two essential functions in the SUMO pathway: processing of full-length SUMOs to their mature forms and deconjugation of SUMO from targeted proteins. Cleaves precursors of SUM1 and SUM2, but not of SUM3 or SUM5. Able to release SUM1 and SUM2 from conjugates, but unable to cleave SUM3. Protease activity mainly directed at deconjugating SUM1 and SUM2 from their target proteins. Regulates salt stress responses and flowering time. Redundant with ULP1C.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 2EC: 2EC: .EC: 6EC: 8

>sp|Q8RWN0|ULP1C_ARATH Ubiquitin-like-specific protease 1C OS=Arabidopsis thaliana GN=ULP1C PE=1 SV=1

 Score = 57.0 bits (136), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 150/384 (39%), Gaps = 91/384 (23%)

Query: 10  KRKLNIDWEEVLPGRNDDVP-AELIVKKSGPPTPAQKSVPMSDDPGSGEELDRQIPDQEL 68
           K  LNIDW++ L   +++VP  E+I     PP     S     +P       R + D EL
Sbjct: 14  KTMLNIDWDDALG--DEEVPELEIIATDKIPPREPTLS---GYEPAVSV---RSLRDNEL 65

Query: 69  GVRIARMKDTYSKVRHCLPDKGKKILATVTRLEKECERRRLAGAVPVCLDIDGCDKLTQS 128
              + R +   +++   L DKG+KI   +  LE E +RR       +    +GC  L + 
Sbjct: 66  DDHLKRQRSLLTRLGDKLADKGEKIRNRIGELEYEKQRRMFQQRTKMQDADNGCQILEKP 125

Query: 129 PSSDCFT-----------QRTPSPQIQSKSSFTSVFREKM-------------------- 157
            SSD F            Q T   +  S+S+F + F + +                    
Sbjct: 126 KSSDVFMRASTASKDTSGQGTSGSKDVSRSTFAAHFSDNLKMGPQPVKLVNDKLQDLGRG 185

Query: 158 ----EENRD-CREANAFDKELSILAHCDRRKMRSDGDLSQRGRQNVRSSSRKWPFHKGDK 212
               + NRD   E N   + L  L+ C            +   +N  S S+     KGD+
Sbjct: 186 SWISKANRDSIIEKNNVWRSLPRLSKC------------KVSLKNFYSESKD---PKGDR 230

Query: 213 SFN-SNGSQKDRAS----LTCPSHQSGENSSSCLPKKKESFEVLPSKNPRLRKEQN--LV 265
             N + G  K   S    L        +        +  S +  P ++   RK+ +  ++
Sbjct: 231 RPNEAYGKGKPNESSPYLLVDDDDGDDDKVIGYETPRHWSLKASPLQSSSCRKKSDDKVI 290

Query: 266 LLDEDE--SP--VEDASEESEGSLHIETTEQADEFAECMIDAKIYYPSRVDPES---VEI 318
            LDEDE  SP  VE+A E  EG                 +   IYYPS    +    V++
Sbjct: 291 NLDEDEPLSPMVVEEACELPEG-----------------LPEDIYYPSSDQSDGRDLVQV 333

Query: 319 CYTDINHLAPAAYLTSPIMNFYIR 342
              D+  L+P  YLTSP++NFYIR
Sbjct: 334 SLKDLKCLSPGEYLTSPVINFYIR 357

Protease that catalyzes two essential functions in the SUMO pathway: processing of full-length SUMOs to their mature forms and deconjugation of SUMO from targeted proteins. Cleaves precursors of SUM1 and SUM2, but not of SUM3 or SUM5. Able to release SUM1 and SUM2 from conjugates, but unable to cleave SUM3. Protease activity mainly directed at deconjugating SUM1 and SUM2 from their target proteins. Regulates salt stress responses and flowering time. Redundant with ULP1D.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 2

EC: .

EC: 6

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	342
296086552	241	unnamed protein product [Vitis vinifera]	0.652	0.925	0.480	1e-43
307135980	445	sentrin/sumo-specific protease [Cucumis	0.883	0.678	0.363	1e-35
449514514	335	PREDICTED: ubiquitin-like-specific prote	0.868	0.886	0.352	2e-29
449434917	440	PREDICTED: ubiquitin-like-specific prote	0.868	0.675	0.352	3e-29
118488302	264	unknown [Populus trichocarpa]	0.669	0.867	0.372	4e-29
224110956	264	predicted protein [Populus trichocarpa]	0.669	0.867	0.372	5e-29
356524061	594	PREDICTED: LOW QUALITY PROTEIN: ubiquiti	0.932	0.537	0.334	9e-29
359473445	408	PREDICTED: uncharacterized protein LOC10	0.701	0.588	0.387	1e-28
356565950	586	PREDICTED: ubiquitin-like-specific prote	0.824	0.481	0.362	4e-27
255568768	243	hypothetical protein RCOM_0527820 [Ricin	0.649	0.913	0.371	3e-23

>gi|296086552|emb|CBI32141.3| unnamed protein product [Vitis vinifera]

 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 121/252 (48%), Positives = 145/252 (57%), Gaps = 29/252 (11%)

Query: 105 ERRRLAGAVPVCLDIDGCDKLTQSP-SSDCFT-----QRTPSPQIQSKSSFTSVFREKME 158
           ERR+L     V  D D C+K TQS  SS C       Q TPS Q   +SSF S     M+
Sbjct: 5   ERRKLCR---VEKDADICEKPTQSHNSSFCGASEGSRQVTPSSQAHPQSSFASHLCRMMD 61

Query: 159 ENR-DCREANAFDKELSILAHCDRRKMRSDGDLSQRGRQNVRSSSRKWPFHKG------- 210
           EN  DCR  +AFDKEL  L  CDRRKM+ +G  S RGRQ  R S R+             
Sbjct: 62  ENEADCRTVDAFDKELLQLRRCDRRKMKMNGQHSHRGRQRTRQSLREASIQSSSSISLDR 121

Query: 211 DKSFNSNGSQKDRASLTCPSHQSGENSSSCLPKKKESFEVLPSKNPRLRKEQNLVLLDED 270
           DK+  SNG QK RA+ TC      EN   C PKK+ + +VLPS + R RK Q +VLLDE+
Sbjct: 122 DKNICSNGDQKGRAASTCSLRHLSENLPVCSPKKRSASQVLPSNDSRQRKGQTVVLLDEE 181

Query: 271 ESPVEDASEESEGSLHIETTEQADEFAECMIDAKIYYPSRVDPESVEICYTDINHLAPAA 330
           E  +            IET +QA +  E M + KIYYPSR DPESVEI ++DI+ LAP A
Sbjct: 182 EPQL------------IETNQQATKITERMKETKIYYPSREDPESVEILFSDIDCLAPQA 229

Query: 331 YLTSPIMNFYIR 342
           YLTSPIMNFYI+
Sbjct: 230 YLTSPIMNFYIQ 241

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|307135980|gb|ADN33839.1| sentrin/sumo-specific protease [Cucumis melo subsp. melo]

 Score =  156 bits (394), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 123/338 (36%), Positives = 180/338 (53%), Gaps = 36/338 (10%)

Query: 13  LNIDWEEVLPGRNDDVPAELIVKKSGPPTPAQKSVPMSDDPGSGEELDRQIPDQELGVRI 72
           L IDW +V   ++DD   +L++      T     +    +  S EEL  ++ D EL  +I
Sbjct: 13  LKIDWGKVWARKDDDPIPDLLI------TTTTSKMDSDWEHSSREEL-LKLSDGELEDKI 65

Query: 73  ARMKDTYSKVRHCLPDKGKKILATVTRLEKECERRRLAGAVPVCLDIDGCDKLTQ-SPSS 131
            RM +      + LPDKG+K+   +   E+E E R+L     +  +  GC+ L+Q + SS
Sbjct: 66  RRMTNLLKTSCYRLPDKGEKLRRCIELAEEERESRKLRR---IEKEATGCENLSQPTTSS 122

Query: 132 DCFTQRTPSPQIQSKSSFTSVFREKMEENRDCREANAFDKELSILAHCDRRKMRSDGDLS 191
               +R  S    S  +FT+ F +K+E+  + R  +AF +ELSIL HCD R+ RS+G LS
Sbjct: 123 IVARERIASSSADSVCAFTARFNQKLEQKTE-RNNSAFGEELSILGHCDNRRQRSNGKLS 181

Query: 192 QRGRQNVRSSSRKWPFHKGDKSFNSNGSQKDRASLTCPSHQS-------GENSSSCLPKK 244
            + +Q  ++SSR+ PF K   S +++  QK  +     S +S        E    C  KK
Sbjct: 182 PKVKQKGQTSSRQQPF-KCVNSLSTDVHQKVSSVAAQNSKRSDHIDFHVSEWQPECFGKK 240

Query: 245 KESFEVLPSKNPRLRKEQNLVLLDEDESPVEDASEESEGSLHIETTEQADEFAECMIDAK 304
            +S EV  S  P  +K Q +V++DE+E+            L ++  +  D+   CM +AK
Sbjct: 241 DDS-EVQHSDTPMPQKRQTIVVVDEEEA------------LAMKIPKHDDK---CMKEAK 284

Query: 305 IYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIR 342
           IYYPSR DPESVEIC+ DI  L P  YLTS IMNFYIR
Sbjct: 285 IYYPSRDDPESVEICFEDIKCLDPEGYLTSTIMNFYIR 322

Source: Cucumis melo subsp. melo

Species: Cucumis melo

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449514514|ref|XP_004164401.1| PREDICTED: ubiquitin-like-specific protease 1D-like [Cucumis sativus]

 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 119/338 (35%), Positives = 176/338 (52%), Gaps = 41/338 (12%)

Query: 13  LNIDWEEVLPGRNDDVPAELIVKKSGPPTPAQKSVPMSDDPGSGEELDRQIPDQELGVRI 72
             IDW +V   ++DD   +L++  +        S   SD   S  E  +++ D EL  +I
Sbjct: 13  FKIDWGKVWARKDDDPIPDLLIATTT-------SKMGSDWEHSFREELQKLSDGELEDKI 65

Query: 73  ARMKDTYSKVRHCLPDKGKKILATVTRLEKECERRRLAGAVPVCLDIDGCDKLTQ-SPSS 131
            RMK+      + L DKG+K+  ++  LE+E E R+L     +  +  GC+ L+Q + SS
Sbjct: 66  DRMKNLSKTSCYRLSDKGEKLRRSIELLEEERESRKLRR---IEKEATGCENLSQPTNSS 122

Query: 132 DCFTQRTPSPQIQSKSSFTSVFREKMEENRDCREANAFDKELSILAHCDRRKMRSDGDLS 191
               +R  S    S S F + F +K+E+  + R  +AF +ELSIL HCD R+ RS+G LS
Sbjct: 123 VVGRERIASSSADSVSIFAARFNQKLEQKTE-RNNSAFGEELSILGHCDNRRQRSNGKLS 181

Query: 192 QRGRQNVRSSSRKWPFHKGD-------KSFNSNGSQKDRASLTCPSHQSGENSSSCLPKK 244
            + +Q  ++SSR+ PF   +       K  +S  +Q  R+S     H   E       KK
Sbjct: 182 PKVKQKGQTSSRQQPFKFVNSLSTDVHKKVSSVAAQNSRSSDHIDFH-VNEWQPERFGKK 240

Query: 245 KESFEVLPSKNPRLRKEQNLVLLDEDESPVEDASEESEGSLHIETTEQADEFAECMIDAK 304
            +S   +P      +K Q +V++DE+E+            L ++  +  D+   CM +AK
Sbjct: 241 DDSDTPMP------QKRQTIVVVDEEEA------------LAMKIPKHDDK---CMKEAK 279

Query: 305 IYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIR 342
           IYYPSR DPESVEIC+ DI  L P  YLTS IMNFYIR
Sbjct: 280 IYYPSRDDPESVEICFEDIKCLDPEGYLTSTIMNFYIR 317

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449434917|ref|XP_004135242.1| PREDICTED: ubiquitin-like-specific protease 1D-like [Cucumis sativus]

 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 119/338 (35%), Positives = 176/338 (52%), Gaps = 41/338 (12%)

Query: 13  LNIDWEEVLPGRNDDVPAELIVKKSGPPTPAQKSVPMSDDPGSGEELDRQIPDQELGVRI 72
             IDW +V   ++DD   +L++  +        S   SD   S  E  +++ D EL  +I
Sbjct: 13  FKIDWGKVWARKDDDPIPDLLIATTT-------SKMGSDWEHSFREELQKLSDGELEDKI 65

Query: 73  ARMKDTYSKVRHCLPDKGKKILATVTRLEKECERRRLAGAVPVCLDIDGCDKLTQ-SPSS 131
            RMK+      + L DKG+K+  ++  LE+E E R+L     +  +  GC+ L+Q + SS
Sbjct: 66  DRMKNLSKTSCYRLSDKGEKLRRSIELLEEERESRKLRR---IEKEATGCENLSQPTNSS 122

Query: 132 DCFTQRTPSPQIQSKSSFTSVFREKMEENRDCREANAFDKELSILAHCDRRKMRSDGDLS 191
               +R  S    S S F + F +K+E+  + R  +AF +ELSIL HCD R+ RS+G LS
Sbjct: 123 VVGRERIASSSADSVSIFAARFNQKLEQKTE-RNNSAFGEELSILGHCDNRRQRSNGKLS 181

Query: 192 QRGRQNVRSSSRKWPFHKGD-------KSFNSNGSQKDRASLTCPSHQSGENSSSCLPKK 244
            + +Q  ++SSR+ PF   +       K  +S  +Q  R+S     H   E       KK
Sbjct: 182 PKVKQKGQTSSRQQPFKFVNSLSTDVHKKVSSVAAQNSRSSDHIDFH-VNEWQPERFGKK 240

Query: 245 KESFEVLPSKNPRLRKEQNLVLLDEDESPVEDASEESEGSLHIETTEQADEFAECMIDAK 304
            +S   +P      +K Q +V++DE+E+            L ++  +  D+   CM +AK
Sbjct: 241 DDSDTPMP------QKRQTIVVVDEEEA------------LAMKIPKHDDK---CMKEAK 279

Query: 305 IYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIR 342
           IYYPSR DPESVEIC+ DI  L P  YLTS IMNFYIR
Sbjct: 280 IYYPSRDDPESVEICFEDIKCLDPEGYLTSTIMNFYIR 317

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118488302|gb|ABK95970.1| unknown [Populus trichocarpa]

 Score =  134 bits (338), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 93/250 (37%), Positives = 142/250 (56%), Gaps = 21/250 (8%)

Query: 6   ENRNKRKLNID--WEEVLPGRNDDVPAELIVKKSGPPTPAQKSVPMSDDPGSGEELDRQI 63
           E   KR L++D  W+ V+ GR+D  P  L++ K+ P    Q +    +D  S       I
Sbjct: 4   EKSKKRPLDLDSNWD-VIMGRDDGEPPPLVIVKNTPQPQPQPTPSQREDFAS-------I 55

Query: 64  PDQELGVRIARMKDTYSKVRHCLPDKGKKILATVTRLEKECERRRLAGAVPVCLDIDGCD 123
            D++L  +I R K    K+   LPDKG+K+  T+  +E+E ++R+     P  +D+  C+
Sbjct: 56  SDKKLEEQIERNKIHVMKLGPTLPDKGQKLQLTIKAMEEELDQRK--HRRPAQMDVAECE 113

Query: 124 KLTQSPSSDCFTQR-TPSPQIQ-SKSSFTSVFREKMEENRDCREANAFDKELSILAHCDR 181
           K   S +S+ F Q+   S Q++ SKS F+++F  KMEEN DCR  NAFDKEL+ L HC+R
Sbjct: 114 KHRNSTASNGFGQKDASSSQVKNSKSQFSTIFSRKMEENTDCRVGNAFDKELTTLGHCNR 173

Query: 182 RKMRSDGDLSQRGRQNVRSSSRKWPFH-------KGDKSFNSNGSQKDRASLTCPSHQSG 234
           + MRS+G   ++ +QN++SSSR+ PF         G++   +NG QK +AS     H + 
Sbjct: 174 QNMRSNGRSGKKRKQNIQSSSRQLPFQFATRVSLNGERRGPANGDQKGKASSAHLLHHNS 233

Query: 235 ENSSSCLPKK 244
           EN S+   KK
Sbjct: 234 ENFSTNSSKK 243

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224110956|ref|XP_002315695.1| predicted protein [Populus trichocarpa] gi|222864735|gb|EEF01866.1| predicted protein [Populus trichocarpa]

 Score =  134 bits (337), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 93/250 (37%), Positives = 142/250 (56%), Gaps = 21/250 (8%)

Query: 6   ENRNKRKLNID--WEEVLPGRNDDVPAELIVKKSGPPTPAQKSVPMSDDPGSGEELDRQI 63
           E   KR L++D  W+ V+ GR+D  P  L++ K+ P    Q +    +D  S       I
Sbjct: 4   EKSKKRPLDLDSNWD-VIMGRDDGEPPPLVIVKNTPQPQPQPTPSQREDFAS-------I 55

Query: 64  PDQELGVRIARMKDTYSKVRHCLPDKGKKILATVTRLEKECERRRLAGAVPVCLDIDGCD 123
            D++L  +I R K    K+   LPDKG+K+  T+  +E+E ++R+     P  +D+  C+
Sbjct: 56  SDKKLEEQIERNKIHVMKLGPTLPDKGQKLQLTIKAMEEELDQRK--HRRPAQMDVAECE 113

Query: 124 KLTQSPSSDCFTQR-TPSPQIQ-SKSSFTSVFREKMEENRDCREANAFDKELSILAHCDR 181
           K   S +S+ F Q+   S Q++ SKS F+++F  KMEEN DCR  NAFDKEL+ L HC+R
Sbjct: 114 KHRNSTASNGFGQKDASSSQVKNSKSQFSTIFSRKMEENTDCRVGNAFDKELTTLGHCNR 173

Query: 182 RKMRSDGDLSQRGRQNVRSSSRKWPFH-------KGDKSFNSNGSQKDRASLTCPSHQSG 234
           + MRS+G   ++ +QN++SSSR+ PF         G++   +NG QK +AS     H + 
Sbjct: 174 QNMRSNGRSGKKRKQNIQSSSRQLPFQFATRVSLNGERRGPANGDQKGKASSAHLLHHNS 233

Query: 235 ENSSSCLPKK 244
           EN S+   KK
Sbjct: 234 ENFSTNSSKK 243

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356524061|ref|XP_003530651.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-like-specific protease 1D-like [Glycine max]

 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 121/362 (33%), Positives = 177/362 (48%), Gaps = 43/362 (11%)

Query: 1   MEEQAENRNKRK--LNIDWEEVL----PGRNDDVPAELIVKKSGPPTPAQKSVPMSDDPG 54
           MEEQ   + K K  L IDW        P R+ D+             PA  S    D   
Sbjct: 1   MEEQQRQQQKPKSPLPIDWSRQFQSDSPPRDYDI------------LPASSSADQDDLSA 48

Query: 55  SGEELDRQIPDQELGVRIARMKDTYSKVRHCLPDKGKKILATVTRLEKECERRRLAGAVP 114
                   IPD +L   I   K T       LPDKG K+ AT+ R ++E   R     + 
Sbjct: 49  --------IPDHKLRESIQSKKRTLDVTGKNLPDKGTKLRATIDRYQQELTHREQQKRLR 100

Query: 115 VCLDIDGCDKLTQSPSSDCFTQRTPS--------PQIQSKSSFTSVFREKMEENRDCREA 166
              D D   +  Q+ S+D  T+   +         Q QS+S+FTS F ++ME+N +C  +
Sbjct: 101 QEDDKDRKPQPGQASSTDAVTEGVSNDLREENLLSQAQSQSTFTSCFVKQMEDNTNCTAS 160

Query: 167 NAFDKELSILAHCDRRKMRSDGDLSQRGRQNVRSSSRKW--PFHKGDKSFNSNGSQKDRA 224
           +AF KE+S+  H D +K++  G+  +R R    S   ++  P     ++  S+G +  RA
Sbjct: 161 DAFRKEMSLFKHSDYQKIQDKGEPRRRKRHRSSSRQLQFQCPSKLSKRNTFSDG-KTCRA 219

Query: 225 SLTCPSHQSGENSSSCLPK---KKESFEVLPSKNPRLRKEQNLVLLDEDESPVEDASEES 281
           + +     +G N   C PK   +K++F+ +     R RK   +VL  +D+   ++  E  
Sbjct: 220 TSSFGLRNNGRNLPRCYPKVHGRKDAFQAIQLDGSRSRKGLPIVLDVDDDDGGDNNDEYD 279

Query: 282 EGSLHI-ETTEQADEFAECMIDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFY 340
           +   HI E TE  ++F E + +AKIY+PSR DPE VEIC+TD N LAP  YLTS IMNFY
Sbjct: 280 DDEAHIVEKTE--NKFPEYLKEAKIYFPSRDDPECVEICFTDTNCLAPEGYLTSTIMNFY 337

Query: 341 IR 342
           I+
Sbjct: 338 IQ 339

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359473445|ref|XP_002264411.2| PREDICTED: uncharacterized protein LOC100241600 [Vitis vinifera]

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/266 (38%), Positives = 133/266 (50%), Gaps = 26/266 (9%)

Query: 11  RKLNIDWEEVLPGRNDDVPAELIVKKSGPPT--PAQKSVPMSDDPGSGEELDRQIPDQEL 68
           R L+++WE +LP ++D+ P  L+V++  P    P Q+     DD            D EL
Sbjct: 10  RPLDLNWETLLPSQDDEPPLVLVVEQESPTIEEPQQQQQTQRDDV-------EYKTDHEL 62

Query: 69  GVRIARMKDTYSKVRHCLPDKGKKILATVTRLEKECERRRLAGAVPVCLDIDGCDKLTQS 128
              I R       +   LPDKG K+   + RL  E ERR+L     V  D D C+K TQS
Sbjct: 63  NELITRQSSYLESLAPKLPDKGAKLRVNLQRLMDERERRKLCR---VEKDADICEKPTQS 119

Query: 129 ------PSSDCFTQRTPSPQIQSKSSFTSVFREKMEENR-DCREANAFDKELSILAHCDR 181
                  +S+   Q TPS Q   +SSF S     M+EN  DCR  +AFDKEL  L  CDR
Sbjct: 120 HNSSFCGASEGSRQVTPSSQAHPQSSFASHLCRMMDENEADCRTVDAFDKELLQLRRCDR 179

Query: 182 RKMRSDGDLSQRGRQNVRSSSRKWPFHKG-------DKSFNSNGSQKDRASLTCPSHQSG 234
           RKM+ +G  S RGRQ  R S R+             DK+  SNG QK RA+ TC      
Sbjct: 180 RKMKMNGQHSHRGRQRTRQSLREASIQSSSSISLDRDKNICSNGDQKGRAASTCSLRHLS 239

Query: 235 ENSSSCLPKKKESFEVLPSKNPRLRK 260
           EN   C PKK+ + +VLPS + R RK
Sbjct: 240 ENLPVCSPKKRSASQVLPSNDSRQRK 265

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356565950|ref|XP_003551198.1| PREDICTED: ubiquitin-like-specific protease 1D-like [Glycine max]

 Score =  128 bits (321), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 112/309 (36%), Positives = 160/309 (51%), Gaps = 27/309 (8%)

Query: 47  VPMSDDPGSGEELD-RQIPDQELGVRIARMKDTYSKVRHCLPDKGKKILATVTRLEKECE 105
           VP S    S ++ D   IPD +L   I   K T       LPDKG K+ AT+ R ++E  
Sbjct: 36  VPASAVMSSADQDDLSAIPDHKLRESIQSKKRTLDVTGKNLPDKGVKLRATIDRYQQELT 95

Query: 106 RRRLAGAVPVCLDID--------GC-DKLTQSPSSDCFTQRTPSPQIQSKSSFTSVFREK 156
           RR     +    D D         C D +T+  S+D   +   S Q QS+S+F S F  K
Sbjct: 96  RREQQKRLRQEDDKDRKPQPGQASCTDAVTEGVSND-LREENLSSQAQSQSTFASCFVNK 154

Query: 157 MEENRDCREANAFDKELSILAHCDRRKMRSDGDLSQRGRQNVRSSSRKW--PFHKGDKSF 214
           ME+N +C  ++AF KE+S+  H   +K++ +G+  +R R    S   ++  P     +  
Sbjct: 155 MEDNTNCTASDAFRKEISLFKHRGNQKIQDNGEPRRRKRHRSSSRKLQFQCPSKLSKRDT 214

Query: 215 NSNGSQKDRASLTCPSHQSGENSSSCLPKKKESFEVLPSKNPRLRKEQNLVLLDEDESPV 274
            S+G +  RA+       +G N   C PK K++F+ +     R RK   +VL  +D+   
Sbjct: 215 FSDG-KTCRATSPFSLWNNGRNLPRCYPKVKDAFQAIQLDGSRPRKP--IVLDIDDDDDD 271

Query: 275 EDASEESEGSLHI-ETTEQADEFAECMIDAKIYYPSRVDPESVEICYTDINHLAPAAYLT 333
           ++A        HI E TE  ++F E + +AKIY+PSR DPE VEICYTD N LAP  YLT
Sbjct: 272 DEA--------HIVEKTE--NKFPEYLKEAKIYFPSRDDPECVEICYTDTNCLAPEGYLT 321

Query: 334 SPIMNFYIR 342
           S IMNFYI+
Sbjct: 322 STIMNFYIQ 330

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255568768|ref|XP_002525355.1| hypothetical protein RCOM_0527820 [Ricinus communis] gi|223535318|gb|EEF36993.1| hypothetical protein RCOM_0527820 [Ricinus communis]

 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 91/245 (37%), Positives = 122/245 (49%), Gaps = 23/245 (9%)

Query: 1   MEEQAENRNKRKLNIDWEEVLPGRNDDVPAELIVKKS----GPPTPAQKSVPMSDDPGSG 56
           MEE  +N  KR L +DW  +L   ++D P  LI+K +      P+P    V  S      
Sbjct: 1   MEE--DNSRKRPLELDWNHILEQNDNDPPPLLIIKTTKEEQSEPSPTMSIVDHSPRDDYA 58

Query: 57  EELDRQIPDQELGVRIARMKDTYSKVRHCLPDKGKKILATVTRLEKECERRRLAGAVPVC 116
              DR++ D      I R K     +   L D G+K+ A    LE+E  RR+   +    
Sbjct: 59  RMTDRELEDA-----IKRQKKNLVLLSPRLADGGEKLRALHKALEEEQRRRK---SRQPD 110

Query: 117 LDIDGCDKLTQSPSSDCFTQRTPSPQIQSKSSFTSVFREKMEENRDCREANAFDKELSIL 176
            D++ C+K TQ  SSD F +   S  + S+S F S+F  KME+N DC     F KELSIL
Sbjct: 111 TDVEICEKPTQFVSSDGFRRENASSDVHSQSEFASIFSRKMEQNTDCSVVKEFGKELSIL 170

Query: 177 AHCDRRKMRSDGDLSQRGRQNVRSSSRKWPFH-------KGDKSFNSNGSQKDRASLTCP 229
             C   K RS+G   +RGRQN +SSSR+ PF         GD +  SNG  K RAS + P
Sbjct: 171 GQCKHPKTRSNGPFLRRGRQNGQSSSRQLPFQCANSLSRNGD-NHASNGVLKGRASAS-P 228

Query: 230 SHQSG 234
             Q+G
Sbjct: 229 FCQNG 233

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	342
TAIR|locus:2195598	584	ULP1D "UB-like protease 1D" [A	0.578	0.339	0.306	2.3e-10
TAIR|locus:2194574	571	OTS2 "OVERLY TOLERANT TO SALT	0.339	0.203	0.322	2.9e-10

TAIR|locus:2195598 ULP1D "UB-like protease 1D" [Arabidopsis thaliana (taxid:3702)]

 Score = 175 (66.7 bits), Expect = 2.3e-10, P = 2.3e-10
 Identities = 72/235 (30%), Positives = 106/235 (45%)

Query:   130 SSDCFTQRTPSPQIQSKSSFTSVFREKMEENRDCREANAFDKELSILAHCDRRKMRSDGD 189
             S D   Q     +  S+S+F++VF +      D +   AF KEL  L  C+RRK ++   
Sbjct:   150 SKDTSRQGNADSKEVSRSTFSAVFSKP---KTDSQSKKAFGKELEDLG-CERRKHKAGRK 205

Query:   190 ----LSQRGR--QNV-RSSSRKWPFHKGDKSFNSNGSQKDRASLTCPSHQS--------- 233
                 LS   R   +V ++      F  G K    N   K+      P   S         
Sbjct:   206 PVTRLSNGWRLLPDVGKAEHSAKQFDSGLKESKGNKKSKEPYGKKRPMESSTYSLIDDDD 265

Query:   234 -----GENSSSCLPKKKE-SFEVLPSKNPRLRKEQNLVLLDEDESPVEDASEESEGSLHI 287
                   +N +S     +E S+E  PS++ R RK+    +++ DE       EE++ S   
Sbjct:   266 DDDDDDDNDTSGHETPREWSWEKSPSQSSRRRKKSEDTVINVDE-------EEAQPST-- 316

Query:   288 ETTEQADEFAECMIDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIR 342
                EQA E  E + +  I YP+R DP  V++C  D+  LAP  YLTSP+MNFY+R
Sbjct:   317 -VAEQAAELPEGLQE-DICYPTRDDPHFVQVCLKDLECLAPREYLTSPVMNFYMR 369

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006508 "proteolysis" evidence=IEA;ISS

GO:0008234 "cysteine-type peptidase activity" evidence=IEA;ISS

GO:0016926 "protein desumoylation" evidence=RCA;IDA

GO:0016929 "SUMO-specific protease activity" evidence=IDA

GO:0009651 "response to salt stress" evidence=IGI

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=IGI;RCA

GO:0007155 "cell adhesion" evidence=RCA

GO:0010090 "trichome morphogenesis" evidence=RCA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045010 "actin nucleation" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

TAIR|locus:2194574 OTS2 "OVERLY TOLERANT TO SALT 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 115 (45.5 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
 Identities = 41/127 (32%), Positives = 59/127 (46%)

Query:    10 KRKLNIDWEEVLPGRNDDVPA-ELIVKKSGPPTPAQKSVPMSDDPGSGEELDRQIPDQEL 68
             K  LNIDW++ L G +++VP  E+I     PP     S     +P       R + D EL
Sbjct:    14 KTMLNIDWDDAL-G-DEEVPELEIIATDKIPPREPTLS---GYEPAVSV---RSLRDNEL 65

Query:    69 GVRIARMKDTYSKVRHCLPDKGKKILATVTRLEKECERRRLAGAVPVCLDID-GCDKLTQ 127
                + R +   +++   L DKG+KI   +  LE E +RR       +  D D GC  L +
Sbjct:    66 DDHLKRQRSLLTRLGDKLADKGEKIRNRIGELEYEKQRRMFQQRTKM-QDADNGCQILEK 124

Query:   128 SPSSDCF 134
               SSD F
Sbjct:   125 PKSSDVF 131

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006508 "proteolysis" evidence=IEA;ISS

GO:0008234 "cysteine-type peptidase activity" evidence=IEA;ISS

GO:0016926 "protein desumoylation" evidence=RCA;IDA

GO:0016929 "SUMO-specific protease activity" evidence=IDA

GO:0009651 "response to salt stress" evidence=IGI

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=IGI;RCA

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	342
KOG0779	595	consensus Protease, Ulp1 family [Posttranslational	97.67
PLN03189	490	Protease specific for SMALL UBIQUITIN-RELATED MODI	96.73
COG5160	578	ULP1 Protease, Ulp1 family [Posttranslational modi	95.88
KOG0778	511	consensus Protease, Ulp1 family [Posttranslational	95.19
PF15328	223	GCOM2: Putative GRINL1B complex locus protein 2	92.57

>KOG0779 consensus Protease, Ulp1 family [Posttranslational modification, protein turnover, chaperones]

Probab=97.67  E-value=2.5e-05  Score=82.17  Aligned_cols=302  Identities=11%  Similarity=-0.054  Sum_probs=170.1

Q ss_pred             ccCCCccccccccCCCCCCCCCceeeeccCCCCCCCCCCCCCCCCCCChhhhccCCCchHHHHHHHHhhhhhhhcccCCC
Q 019383            8 RNKRKLNIDWEEVLPGRNDDVPAELIVKKSGPPTPAQKSVPMSDDPGSGEELDRQIPDQELGVRIARMKDTYSKVRHCLP   87 (342)
Q Consensus         8 ~~k~~l~idW~~~~~~~dd~~p~~~iv~~t~~~~p~~~t~~~~dD~~~~~el~~~lsD~eL~E~I~R~k~~L~gl~~rLP   87 (342)
                      +.++...|.|+.++. +....+.+.+|-++++-   +|+++ .|.   ...+...+.+..|.+.-.|..+.+..++.+++
T Consensus        10 ~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~---~~~~~-~~i---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (595)
T KOG0779|consen   10 SEVKSSSIMVESADV-KELLIRRLEFVVLIKKS---RPNYL-NDI---IIDLVLLKDDNTLNDEYTRELSILFILAVKKG   81 (595)
T ss_pred             cccccceeEeccCCC-ccceeeccccccccccC---Ccccc-ccc---ccchheeccccCCCccccceeeecccCCcccc
Confidence            668899999999888 56677777777766643   35555 333   23457889999999999999999988999999


Q ss_pred             cchHhHHHHHHHHHHHHHHHHhhCCCCc---------------ccccccccccccCC----------------------C
Q 019383           88 DKGKKILATVTRLEKECERRRLAGAVPV---------------CLDIDGCDKLTQSP----------------------S  130 (342)
Q Consensus        88 DkG~Klr~~I~~le~E~dRRkarr~~~~---------------~~Dv~~cek~vqS~----------------------S  130 (342)
                      +.|.+-+..|..++.+..+|+..+- ..               -+|.- +.+...-.                      .
T Consensus        82 ~~~~~~~~ki~~~~~~~~~~~~~~~-~~~~~~~~~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (595)
T KOG0779|consen   82 LTSLTEPLKIAVLEEQKPHAVVPKK-IISVSELRNTNLTEGTFYSDYL-NRIKNIFESVRKFFNQVSYPKFMPNVTSFMP  159 (595)
T ss_pred             ccccccccccccccccCCccccccc-cccchhccccCCcccceecccc-cccccccchhcchhhhcccccccchhhcccC
Confidence            9999999999999999999977651 00               01111 11111111                      0


Q ss_pred             CCccccCC----CCCcccccccchhhhhhhhccccccccchhhhHHHhhhccccccccccCCcccccccccccc--CCcc
Q 019383          131 SDCFTQRT----PSPQIQSKSSFTSVFREKMEENRDCREANAFDKELSILAHCDRRKMRSDGDLSQRGRQNVRS--SSRK  204 (342)
Q Consensus       131 Sd~~~q~~----~sSk~~S~S~Fts~F~~~~E~ntd~~~~~Af~kElS~lg~cd~~~~k~ng~~~~~~k~n~~s--Ssrq  204 (342)
                      +.++++..    +..=..++..|..+|.+.  ..++-....++..++...+ ++....+ -+...-+...+..-  +.-.
T Consensus       160 ~~~~~~q~~~~~~~~i~i~~~~~~~~fi~~--~~~~~~~~~~~~~~~~~~l-~~~~~~~-~~~~~~~~~~~~k~~~~~~~  235 (595)
T KOG0779|consen  160 SPLEKCQLQRVFTWTINITRKLFKKLFIKI--FKNEPFHFKAVKFLLPSAL-TKSDVCD-IADLEVIFLNSRKDSHSLVI  235 (595)
T ss_pred             CcccccccccccceeeeeeecchhhhcccC--cccCchhhhhhhcccchhc-cchhhhh-hhcccccchhcccchhhhhh
Confidence            11111000    000012334444444321  0122233445555665554 2222111 11111111111111  1111


Q ss_pred             Cccc-----cCCCcc----------cCCCCCCCCCCCCCCCCCCCCCCC--------CCCCcccccccccCCCCcccccc
Q 019383          205 WPFH-----KGDKSF----------NSNGSQKDRASLTCPSHQSGENSS--------SCLPKKKESFEVLPSKNPRLRKE  261 (342)
Q Consensus       205 ~~~~-----s~D~~~----------~~ng~~~g~~S~~~~~~~~~en~~--------i~s~Kr~~~f~~~~s~~~r~rk~  261 (342)
                      .++.     ....+.          ...+.-.++.+.++.+++..+..-        .-..++.|.....++....++..
T Consensus       236 ~~~~~~~~~~~~s~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~dd~~~~~~~~~~~~~~~~~~~~~~~s~~q~~s~~~~  315 (595)
T KOG0779|consen  236 SSINSPNIKTFFSKEVKSRPTPASYFIFSSFLPGLDPPAELHQNDDIDDIGIILNESPLDKPFEWLLANSPNQSESRSRD  315 (595)
T ss_pred             cccccccchhhhccccccCCCcccccccccccCCCCccccccccchhhhhhhcccccccccchhhhhhcCcccchhcccc
Confidence            1111     111111          022333444666777666655222        22588889988888888777774


Q ss_pred             cce-Ee-ccCCCCCCcccccccccccccchhhhhHHHHhhhccceeeccCCCCCCceeeecccccccCccccccCcccce
Q 019383          262 QNL-VL-LDEDESPVEDASEESEGSLHIETTEQADEFAECMIDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNF  339 (342)
Q Consensus       262 ~~~-vl-ldd~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ki~YPSr~dpe~vei~~~Di~cL~P~~~L~spiinF  339 (342)
                      ... ++ +.+.+-..            ..+.+...      .--..+-|+-.+ ..+.|+..|+.||++.+||+++||+|
T Consensus       316 ~~~~~~~~~~~~~~~------------~l~~~~~~------el~~~~~p~~~~-~~~~v~~~Dl~cl~~~e~L~d~i~df  376 (595)
T KOG0779|consen  316 SLDNWFPVKEADKQR------------TLIVKLAI------ELLEVRVPQICN-QSHQVNNNDLVCLEEGEFLNDTIKDF  376 (595)
T ss_pred             ccccccccccccccc------------chHHHhhc------cccccCCccccc-cccceeccchhhccccchhhhhhhhh
Confidence            322 33 54444322            11223332      233344555455 58899999999999999999999999


Q ss_pred             ecC
Q 019383          340 YIR  342 (342)
Q Consensus       340 Yi~  342 (342)
                      |++
T Consensus       377 yl~  379 (595)
T KOG0779|consen  377 YLE  379 (595)
T ss_pred             hhH
Confidence            974

>PLN03189 Protease specific for SMALL UBIQUITIN-RELATED MODIFIER (SUMO); Provisional

Probab=96.73  E-value=0.00028  Score=72.97  Aligned_cols=31  Identities=23%  Similarity=0.551  Sum_probs=29.0

Q ss_pred             CCCceeeecccccccCccccccCcccceecC
Q 019383          312 DPESVEICYTDINHLAPAAYLTSPIMNFYIR  342 (342)
Q Consensus       312 dpe~vei~~~Di~cL~P~~~L~spiinFYi~  342 (342)
                      ++..|+|++.||.||.|..+||+.||||||+
T Consensus       284 ~~~~i~IT~~DL~~L~Pg~WLNDeVINfYm~  314 (490)
T PLN03189        284 ENSNIDITGEILRCLKPGAWLNDEVINLYLE  314 (490)
T ss_pred             CCCceEEEHHHhhccCCCCccCHHHHHHHHH
Confidence            5678999999999999999999999999984

>COG5160 ULP1 Protease, Ulp1 family [Posttranslational modification, protein turnover, chaperones]

Probab=95.88  E-value=0.0015  Score=68.16  Aligned_cols=36  Identities=33%  Similarity=0.695  Sum_probs=32.5

Q ss_pred             eccCCCCCCceeeecccccccCccccccCcccceecC
Q 019383          306 YYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIR  342 (342)
Q Consensus       306 ~YPSr~dpe~vei~~~Di~cL~P~~~L~spiinFYi~  342 (342)
                      +||=- +-+.+||+..|++||.++++||++|||||++
T Consensus       372 ~~~~~-~~~~i~IT~~D~~~L~~~~wLNDtIIdFy~k  407 (578)
T COG5160         372 CYPFN-DRSSIEITNQDFKRLRNGDWLNDTIIDFYMK  407 (578)
T ss_pred             ccccc-CcCcceeehHhhhhhccccchhhHHHHHHHH
Confidence            77754 5689999999999999999999999999984

>KOG0778 consensus Protease, Ulp1 family [Posttranslational modification, protein turnover, chaperones]

Probab=95.19  E-value=0.0033  Score=65.61  Aligned_cols=27  Identities=30%  Similarity=0.749  Sum_probs=26.0

Q ss_pred             ceeeecccccccCccccccCcccceec
Q 019383          315 SVEICYTDINHLAPAAYLTSPIMNFYI  341 (342)
Q Consensus       315 ~vei~~~Di~cL~P~~~L~spiinFYi  341 (342)
                      .++|+..||.||.|..+||+.|||||+
T Consensus       317 ~i~It~~dl~tl~~~~WLNDevINfYm  343 (511)
T KOG0778|consen  317 NIDITGKDLQTLRPGNWLNDEVINFYM  343 (511)
T ss_pred             cccccHHHHhhccCccchhHHHHHHHH
Confidence            399999999999999999999999997

>PF15328 GCOM2: Putative GRINL1B complex locus protein 2

Probab=92.57  E-value=0.11  Score=48.58  Aligned_cols=35  Identities=37%  Similarity=0.452  Sum_probs=29.9

Q ss_pred             HHhhhhhh--hcccCCCcchHhHHHHHHHHHHHHHHH
Q 019383           73 ARMKDTYS--KVRHCLPDKGKKILATVTRLEKECERR  107 (342)
Q Consensus        73 ~R~k~~L~--gl~~rLPDkG~Klr~~I~~le~E~dRR  107 (342)
                      +|+..+|.  .+-.+|||||+||...+..|..++.+|
T Consensus         3 ~rq~klL~nkkfi~kLpDKGkKI~~~~~kL~~ai~~r   39 (223)
T PF15328_consen    3 RRQEKLLRNKKFICKLPDKGKKIQDFVEKLKAAIAER   39 (223)
T ss_pred             hHHHHHhcchhhhhcCCchhHHHHHHHHHHHHHHHHH
Confidence            45666665  466899999999999999999999998

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	342
3eay_A	323	Sentrin-specific protease 7; ULP, SENP, SUMO, ubiq	2e-04

>3eay_A Sentrin-specific protease 7; ULP, SENP, SUMO, ubiquitin, crystal, alternative splicing, hydrolase, phosphoprotein, polymorphism, thiol protease; 2.40A {Homo sapiens} Length = 323

 Score = 41.7 bits (96), Expect = 2e-04
 Identities = 12/58 (20%), Positives = 24/58 (41%), Gaps = 4/58 (6%)

Query: 289 TTEQADEFAECM----IDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIR 342
           T+   +E+ E      +   I YP       + +   D+  L    +L   I++FY++
Sbjct: 2   TSNPDEEWREVRHTGLVQKLIVYPPPPTKGGLGVTNEDLECLEEGEFLNDVIIDFYLK 59

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	342
2xph_A	238	Sentrin-specific protease 1; hydrolase, cysteine p	95.69

>2xph_A Sentrin-specific protease 1; hydrolase, cysteine protease, thiol protease; 2.40A {Homo sapiens} PDB: 2xre_A 2iyc_A 2iyd_A 2iy1_A 2iy0_A 2ckg_A 2ckh_A 2g4d_A

Probab=95.69  E-value=0.00098  Score=60.24  Aligned_cols=28  Identities=32%  Similarity=0.596  Sum_probs=26.2

Q ss_pred             ceeeecccccccCccccccCcccceecC
Q 019383          315 SVEICYTDINHLAPAAYLTSPIMNFYIR  342 (342)
Q Consensus       315 ~vei~~~Di~cL~P~~~L~spiinFYi~  342 (342)
                      -|.|+.+|+.||.|.++||+.|||||++
T Consensus        43 ~~~l~~~Dl~~L~~~~wLND~iI~fy~~   70 (238)
T 2xph_A           43 RLTITRKDIQTLNHLNWLNDEIINFYMN   70 (238)
T ss_dssp             TEEECHHHHHTTSTTCCCCHHHHHHHHH
T ss_pred             CcEEeHHHHhhcCCCCccCHHHHHHHHH
Confidence            5789999999999999999999999973

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00