Citrus Sinensis ID: 019428

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-
Protein Sequence
MKSKLGLCLGFLSQIDPNGNNFSFALLGSSLVISSMASARLQFSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADDKPIKRTATSSFKVNIRKLSFSEREEADEEKRAPV
Secondary Structure (PSIPRED)
cccccEEEEcccccccccccHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccccccccccccccHHHcccccccccHHcHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccccEEEEEccccccccccEEHHHHEEHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHcccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHcccccc
Coil and Loop (DISEMBL)
mksklglclgflsqidpngnnfSFALLGSSLVISSMASARLQFSYGWYFTFIQGFVYLVLIYLQGfttkqmmnpwKTYVKLSAVLMgshgltkgslAFLNYPAQLMFKSTKVLPVMVMgafipglrrkypaHEYVSALLLVVGLILFTLadaqtspnfsMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTvvglpmlippmlltGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIftkplteqhgTGLLLIAMGITlkllpaddkpikrtatSSFKVNIRKlsfsereeadeekrapv
Flexible Loop (DISEMBL)
MKSKLGLCLGFLSQIDPNGNNFSFALLGSSLVISSMASARLQFSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKllpaddkpikrtatssfkvnirklsfsereeadeekrapv
Low Complexity Region (SEG)
MKSKLGLCLGFLSQIDPNGNNFSFALLGSSLVISSMASARLQFSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYvsalllvvglilftlADAQTSPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADDKPIKRTATSSFKVNIRKLSFSEREEADEEKRAPV
Disordered region (IsUnstruct)
****LGLCLGFLSQIDPNGNNFSFALLGSSLVISSMASARLQFSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPAD***********************************
Disordered Region (DISOPRED)
**SKLGLCLGFLSQIDPNGNNFSFALLGSSLVISSMASARLQFSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKL***************************************
Disordered Region (DISEMBL)
MKSKLGLCLGFLSQIDPNGNNFSFALLGSSLVISSMASARLQFSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADDKPIKRTATSSFKVNIRKLSF**************
Disordered Region (DISPRO)
**SKLGLCLGFLSQIDPNGNNFSFALLGSSLVISSMASARLQFSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADD**********************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MKSKLGLCLGFLSQIDPNGNNFSFALLGSSLVISSMASARLQFSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADDKPIKRTATSSFKVNIRKLSFSEREEADEEKRAPV
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	341	2.2.26 [Sep-21-2011]
Q9LDX3	349	UDP-galactose/UDP-glucose	yes	no	0.870	0.851	0.802	1e-132
Q29Q28	345	UDP-galactose/UDP-glucose	no	no	0.873	0.863	0.795	1e-132
Q5R831	401	Adenosine 3'-phospho 5'-p	yes	no	0.777	0.660	0.365	5e-40
Q9H1N7	401	Adenosine 3'-phospho 5'-p	yes	no	0.777	0.660	0.365	1e-39
Q29EY2	392	Adenosine 3'-phospho 5'-p	yes	no	0.797	0.693	0.355	2e-39
Q9VVD9	396	Adenosine 3'-phospho 5'-p	yes	no	0.759	0.654	0.359	2e-38
Q17CE7	382	Adenosine 3'-phospho 5'-p	N/A	no	0.797	0.712	0.356	2e-38
Q922Q5	369	Adenosine 3'-phospho 5'-p	no	no	0.774	0.715	0.370	3e-38
Q7Q5D4	377	Adenosine 3'-phospho 5'-p	yes	no	0.809	0.732	0.341	6e-37
Q20787	364	Adenosine 3'-phospho 5'-p	yes	no	0.753	0.706	0.325	7e-33

>sp|Q9LDX3|UTR4_ARATH UDP-galactose/UDP-glucose transporter 4 OS=Arabidopsis thaliana GN=UTR4 PE=2 SV=1

 Score =  472 bits (1214), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 240/299 (80%), Positives = 265/299 (88%), Gaps = 2/299 (0%)

Query: 40  RLQFSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFL 99
           RL+FSYGWYFTF QG VY+ LIY+ GF TKQM+NPWKTYVKLS VLMGSHGLTKGSLA+L
Sbjct: 50  RLKFSYGWYFTFAQGLVYIALIYMYGFRTKQMVNPWKTYVKLSGVLMGSHGLTKGSLAYL 109

Query: 100 NYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFS 159
           NYPAQ+MFKSTKVLPVMVMGAFIPGLRRKYP HEY+SA+LLV+GLILFTLADA TSPNFS
Sbjct: 110 NYPAQIMFKSTKVLPVMVMGAFIPGLRRKYPVHEYISAMLLVIGLILFTLADAHTSPNFS 169

Query: 160 MIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFK 219
           +IGV+MISGALIMD+FLGNLQEAIFTMNPETTQMEMLFCSTVVGLP L+ PM+LTGELF 
Sbjct: 170 IIGVMMISGALIMDAFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPFLLAPMILTGELFT 229

Query: 220 AWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIF 279
           AWNSC+QH YVYGVLVFEAMATFIGQVSVLSLIALFGAATTAM+TTARKAVTLLLSYLIF
Sbjct: 230 AWNSCAQHPYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMITTARKAVTLLLSYLIF 289

Query: 280 TKPLTEQHGTGLLLIAMGITLKLLPADDKPIKRTATSSFKVNIRKLSFSEREEADEEKR 338
           TKPLTEQHGTGLLLI MGI LK++P  +   K + +      + ++ F   +E DEE R
Sbjct: 290 TKPLTEQHGTGLLLIFMGIILKMVPDPNPNPKSSGSGQTPGKLERVKF--EKEDDEESR 346

Sugar transporter involved in the transport of nucleotide-sugars from cytoplasm into the Golgi and/or the endoplasmic reticulum.
Arabidopsis thaliana (taxid: 3702)

>sp|Q29Q28|UTR2_ARATH UDP-galactose/UDP-glucose transporter 2 OS=Arabidopsis thaliana GN=UTR2 PE=2 SV=1

 Score =  470 bits (1209), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 241/303 (79%), Positives = 271/303 (89%), Gaps = 5/303 (1%)

Query: 40  RLQFSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFL 99
           RLQFS+GWYFTFIQGFVYL LIYLQGFTTK ++NP +TYVKLSAVLMGSHGLTKGSLA+L
Sbjct: 47  RLQFSFGWYFTFIQGFVYLFLIYLQGFTTKHIVNPMRTYVKLSAVLMGSHGLTKGSLAYL 106

Query: 100 NYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFS 159
           NYPAQ+MFKSTKVLPVM+MGAFIPGLRRKYP HEY+SA LLV+GLILFTLADAQ SPNFS
Sbjct: 107 NYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPVHEYISAFLLVLGLILFTLADAQMSPNFS 166

Query: 160 MIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFK 219
           MIG++MI+GALIMD+FLGNLQEAIFTMNPETTQMEMLFCSTVVGLP L  PM+LTGE+F+
Sbjct: 167 MIGIMMITGALIMDAFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPFLFVPMVLTGEVFR 226

Query: 220 AWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIF 279
           AW +C+QH YVYGVLVFEAMATFIGQVSVLSLIALFGAATTA++TTARK VTLLLSYLIF
Sbjct: 227 AWTACAQHPYVYGVLVFEAMATFIGQVSVLSLIALFGAATTALITTARKGVTLLLSYLIF 286

Query: 280 TKPLTEQHGTGLLLIAMGITLKLLPADDK-PIKRTATSSFKVNIRKLSFSEREEADEEKR 338
           TKPLTEQHG+GLLLIAMGI LK++P D K P K  A  + ++        +REE DEE++
Sbjct: 287 TKPLTEQHGSGLLLIAMGIVLKMVPMDSKAPAKIPARPAVRIAGGD---GDREE-DEERK 342

Query: 339 APV 341
           + V
Sbjct: 343 SLV 345

Sugar transporter involved in the transport of UDP-galactose form the cytoplasm into the Golgi apparatus.

Arabidopsis thaliana (taxid: 3702)

>sp|Q5R831|S35B3_PONAB Adenosine 3'-phospho 5'-phosphosulfate transporter 2 OS=Pongo abelii GN=SLC35B3 PE=2 SV=1

 Score =  165 bits (417), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 99/271 (36%), Positives = 159/271 (58%), Gaps = 6/271 (2%)

Query: 44  SYGWYFTFIQGFVYLV--LIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNY 101
           SYGWY T +Q   Y +  LI LQ    K+   P KTY+ ++ + +G+ GL+  SL +LNY
Sbjct: 110 SYGWYLTLVQFAFYSIFGLIELQPIQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNY 169

Query: 102 PAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMI 161
           P Q++FK  K++PVM+ G FI G  ++Y   +  +A+ + +GLI FTLAD+  +PNF++ 
Sbjct: 170 PTQVIFKCCKLIPVMLGGVFIQG--KRYNVADVSAAICMSLGLIWFTLADSTIAPNFNLT 227

Query: 162 GVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAW 221
           GV++IS AL  D+ +GN+QE    ++   +  EM+  S  +G   ++  +  T  L  A 
Sbjct: 228 GVVLISLALCADAVIGNVQEKAMKLH-NASNSEMVLYSYSIGFVYILLGLTCTSGLGPAV 286

Query: 222 NSCSQH-LYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFT 280
             C+++ +  YG     ++  + G   VL+LI +FGA     VTT RKA+T++LS++ F 
Sbjct: 287 TFCAKNPVRTYGYAFLFSLTGYFGISFVLALIKIFGALIAVTVTTGRKAMTIVLSFIFFA 346

Query: 281 KPLTEQHGTGLLLIAMGITLKLLPADDKPIK 311
           KP T Q+    LL+ +GI L +   +   I+
Sbjct: 347 KPFTFQYVWSGLLVFLGIFLNVYSKNMDKIR 377

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi. Compensates for the insufficient expression of SLC35B2/PAPST1 during the synthesis of sulfated glycoconjugates in the colon.

Pongo abelii (taxid: 9601)

>sp|Q9H1N7|S35B3_HUMAN Adenosine 3'-phospho 5'-phosphosulfate transporter 2 OS=Homo sapiens GN=SLC35B3 PE=1 SV=1

 Score =  164 bits (415), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/271 (36%), Positives = 159/271 (58%), Gaps = 6/271 (2%)

Query: 44  SYGWYFTFIQGFVYLV--LIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNY 101
           S GWY T +Q   Y +  LI LQ    K+   P KTY+ ++ + +G+ GL+  SL +LNY
Sbjct: 110 SCGWYLTLVQFAFYSIFGLIELQLIQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNY 169

Query: 102 PAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMI 161
           P Q++FK  K++PVM+ G FI G  ++Y   +  +A+ + +GLI FTLAD+ T+PNF++ 
Sbjct: 170 PTQVIFKCCKLIPVMLGGVFIQG--KRYNVADVSAAICMSLGLIWFTLADSTTAPNFNLT 227

Query: 162 GVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAW 221
           GV++IS AL  D+ +GN+QE    ++   +  EM+  S  +G   ++  +  T  L  A 
Sbjct: 228 GVVLISLALCADAVIGNVQEKAMKLH-NASNSEMVLYSYSIGFVYILLGLTCTSGLGPAV 286

Query: 222 NSCSQH-LYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFT 280
             C+++ +  YG     ++  + G   VL+LI +FGA     VTT RKA+T++LS++ F 
Sbjct: 287 TFCAKNPVRTYGYAFLFSLTGYFGISFVLALIKIFGALIAVTVTTGRKAMTIVLSFIFFA 346

Query: 281 KPLTEQHGTGLLLIAMGITLKLLPADDKPIK 311
           KP T Q+    LL+ +GI L +   +   I+
Sbjct: 347 KPFTFQYVWSGLLVVLGIFLNVYSKNMDKIR 377

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi. Compensates for the insufficient expression of SLC35B2/PAPST1 during the synthesis of sulfated glycoconjugates in the colon.

Homo sapiens (taxid: 9606)

>sp|Q29EY2|S35B3_DROPS Adenosine 3'-phospho 5'-phosphosulfate transporter 2 OS=Drosophila pseudoobscura pseudoobscura GN=Papst2 PE=3 SV=2

 Score =  163 bits (412), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/290 (35%), Positives = 166/290 (57%), Gaps = 18/290 (6%)

Query: 45  YGWYFTFIQGFVY----LVLIYLQGFTT--KQMMN--------PWKTYVKLSAVLMGSHG 90
           +GW+ T +Q   Y    LV   L+ + +  + + N        P KTY+ L+A+ +G+ G
Sbjct: 88  FGWFLTLVQFGYYIGFGLVERRLEAYRSGRRSLWNVEPAPRCIPMKTYLVLAALTLGTMG 147

Query: 91  LTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLA 150
           L+  SL +LNYP Q++FK  K++PV+V    I G  ++Y   ++ +A  + +GL  FTLA
Sbjct: 148 LSNSSLGYLNYPTQVIFKCCKLIPVLVGSILIQG--KRYGPLDFAAASCMCIGLAWFTLA 205

Query: 151 DAQTSPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPP 210
           D+Q +PNF+++GV MISGAL+ D+ +GN+QE     +   +  E++F S  +G   L   
Sbjct: 206 DSQMTPNFNLLGVAMISGALLCDAAIGNVQEKAMKEHKAPSS-EVVFYSYGLGFVYLFVI 264

Query: 211 MLLTGELFKAWNSCSQH-LYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKA 269
           ML+TG  F  +  C +H L  +G     +++ ++G   VL+L+   GA   A VTTARKA
Sbjct: 265 MLVTGNFFSGFAFCLEHPLQTFGYGFLFSLSGYLGIQFVLALVRSSGAPIAATVTTARKA 324

Query: 270 VTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADDKPIKRTATSSFK 319
           VT+  S+++F+KP T Q+    L++ +GI L +    +K       S FK
Sbjct: 325 VTIAFSFVLFSKPFTVQYLWSGLIVVLGIYLNVYSKKNKLTFADIRSRFK 374

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi. Essential for viability. Involved in glycosaminoglycan synthesis and the subsequent signaling. May be involved in hh and dpp signaling by controlling the sulfation of heparan sulfate (HS).

Drosophila pseudoobscura pseudoobscura (taxid: 46245)

>sp|Q9VVD9|S35B3_DROME Adenosine 3'-phospho 5'-phosphosulfate transporter 2 OS=Drosophila melanogaster GN=Papst2 PE=1 SV=2

 Score =  160 bits (404), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/281 (35%), Positives = 161/281 (57%), Gaps = 22/281 (7%)

Query: 45  YGWYFTFIQGFVY----LVLIYLQGFTT----------KQMMNPWKTYVKLSAVLMGSHG 90
           YGW+ T +Q   Y    LV   L+G+            +    P +TY+ L+A+ +G+ G
Sbjct: 92  YGWFLTLVQFGYYIGFGLVERRLEGYRISGGSFWNIEPEPRCIPMRTYLILAALTLGTMG 151

Query: 91  LTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLA 150
           L+  SL +LNYP Q++FK  K++PV+V    I G  ++Y   ++ +A  + +GL  FTLA
Sbjct: 152 LSNSSLGYLNYPTQVIFKCCKLIPVLVGSILIQG--KRYGLLDFAAATCMCIGLAWFTLA 209

Query: 151 DAQTSPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPP 210
           D+Q +PNF+++GV MISGAL+ D+ +GN+QE       +    E++F S  +G   L   
Sbjct: 210 DSQMTPNFNLLGVAMISGALLCDAAIGNVQEKAMR-EFKAPSSEVVFYSYGLGFVYLFVI 268

Query: 211 MLLTGELFKAWNSCSQH---LYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTAR 267
           ML+TG  F  +  C +H    + YG L   +++ ++G   VL+L+   GA   A VTTAR
Sbjct: 269 MLVTGNFFSGFAFCLEHPVETFGYGFLF--SLSGYLGIQFVLALVRSSGAPIAATVTTAR 326

Query: 268 KAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADDK 308
           KAVT+  S+++F+KP T Q+    L++ +GI L +    +K
Sbjct: 327 KAVTIAFSFVLFSKPFTLQYLWSGLIVVLGIYLNVYSKRNK 367

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi. Essential for viability. Involved in glycosaminoglycan synthesis and the subsequent signaling. May be involved in hh and dpp signaling by controlling the sulfation of heparan sulfate (HS).

Drosophila melanogaster (taxid: 7227)

>sp|Q17CE7|S35B3_AEDAE Adenosine 3'-phospho 5'-phosphosulfate transporter 2 OS=Aedes aegypti GN=Papst2 PE=3 SV=1

 Score =  159 bits (403), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/283 (35%), Positives = 165/283 (58%), Gaps = 11/283 (3%)

Query: 45  YGWYFTFIQGFVYLVLIYLQ-GFTTKQMMN--PWKTYVKLSAVLMGSHGLTKGSLAFLNY 101
           YGW+ T +Q   Y V  Y++    +K++    P KTYV L+ + +G+ GL+  SL +LNY
Sbjct: 84  YGWFLTLVQFAYYTVFGYVERSLESKRVPRCIPMKTYVLLAFLTLGTMGLSNSSLGYLNY 143

Query: 102 PAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMI 161
           P Q++FK  K++PV++    I G  +K+   ++++A+ + +GL LFTLAD+Q SPNF+  
Sbjct: 144 PTQVIFKCCKLVPVLIGSILIQG--KKHGPLDFLAAIAMCLGLTLFTLADSQVSPNFNPF 201

Query: 162 GVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAW 221
           GV++IS AL+ D+ +GN+QE     + +    E++  S  +G   L   MLLTG LF   
Sbjct: 202 GVLLISLALLCDAAIGNVQEKAMREH-KAPNNEVVIYSYGIGFVYLSVIMLLTGNLFSGI 260

Query: 222 NSCSQH-LYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFT 280
             C ++ +  +G     +++ ++G   VL+L+   GA   A VTTARKAVT+ LS++ F+
Sbjct: 261 TFCMKYPVETFGYAFLFSLSGYLGIQIVLTLVRTCGAPLAATVTTARKAVTIALSFVFFS 320

Query: 281 KPLTEQHGTGLLLIAMGITLKLLPADDK----PIKRTATSSFK 319
           KP T  +    L++ +GI L +     K     + RTA   ++
Sbjct: 321 KPFTINYLWSGLIVVLGIYLNVYSKRSKLTFADLNRTAERIYR 363

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi. Essential for viability. Involved in glycosaminoglycan synthesis and the subsequent signaling. May be involved in hh and dpp signaling by controlling the sulfation of heparan sulfate (HS).

Aedes aegypti (taxid: 7159)

>sp|Q922Q5|S35B3_MOUSE Adenosine 3'-phospho 5'-phosphosulfate transporter 2 OS=Mus musculus GN=Slc35b3 PE=2 SV=1

 Score =  159 bits (402), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/270 (37%), Positives = 158/270 (58%), Gaps = 6/270 (2%)

Query: 45  YGWYFTFIQGFVYLV--LIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYP 102
           YGWY T +Q   Y V  LI LQ    ++   P KTY+ ++ + +G+ GL+  SL +LNYP
Sbjct: 79  YGWYLTLVQFAFYSVFGLIELQLTQDRRRRIPGKTYMLIAFLTVGTMGLSNTSLGYLNYP 138

Query: 103 AQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIG 162
            Q++FK  K++PVM+ G FI G  ++Y   +  +A+ + +GLI FTLAD+  +PNF++ G
Sbjct: 139 TQVIFKCCKLIPVMLGGVFIQG--KRYNLADVSAAVCMSLGLIWFTLADSTIAPNFNLTG 196

Query: 163 VIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWN 222
           V++IS AL  D+ +GN+QE    ++   +  EM+  S  +G   ++  +  T  L  A  
Sbjct: 197 VMLISLALCADAVIGNVQEKAMKLH-NASNSEMVLYSYSIGFVYILLGLSCTSGLGPAVA 255

Query: 223 SCSQH-LYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTK 281
            CS++ +  YG     ++  + G   VL+LI +FGA     VTT RKA+T++LS+L F K
Sbjct: 256 FCSKNPVGTYGYAFLFSLTGYFGISFVLALIKIFGALLAVTVTTGRKAMTVVLSFLFFAK 315

Query: 282 PLTEQHGTGLLLIAMGITLKLLPADDKPIK 311
           P T Q+    LL+ +GI L +   +   I+
Sbjct: 316 PFTFQYIWSGLLVVLGIFLNVYSKNMDKIR 345

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi. Compensates for the insufficient expression of SLC35B2/PAPST1 during the synthesis of sulfated glycoconjugates in the colon.

Mus musculus (taxid: 10090)

>sp|Q7Q5D4|S35B3_ANOGA Adenosine 3'-phospho 5'-phosphosulfate transporter 2 OS=Anopheles gambiae GN=Papst2 PE=3 SV=4

 Score =  155 bits (391), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 98/287 (34%), Positives = 160/287 (55%), Gaps = 11/287 (3%)

Query: 45  YGWYFTFIQGFVYLVLIYLQG---FTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNY 101
           YGWY T +Q   Y    Y++     TT     P +TY  L+ + +G+ GL+  S+ +LNY
Sbjct: 78  YGWYLTLVQFAYYTAFGYIERSVERTTVPRCIPLRTYALLAFLTLGTMGLSNSSVGYLNY 137

Query: 102 PAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMI 161
           P Q++FK  K++PV++    I G  +K+   ++ +A  + +GLILFTLAD+Q  P+F+  
Sbjct: 138 PTQVIFKCCKLIPVLIGSVLIQG--KKHGPMDFFAATAMCLGLILFTLADSQVQPDFNRF 195

Query: 162 GVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAW 221
           GV +IS AL+ D+ +GN+QE     +      E++  S  +G   L   MLL+G L +  
Sbjct: 196 GVFLISLALLCDAAIGNVQEKAMREH-RAPNNEVVIYSYGIGFVYLAVIMLLSGHLVQGV 254

Query: 222 NSCSQH-LYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFT 280
             C+++ +  YG     ++  ++G   VL+L+   GA   A VTTARKAVT+ LS++ F+
Sbjct: 255 AFCARYPMETYGYAFLFSLTGYLGIQIVLTLVRTCGAPLAATVTTARKAVTIALSFVFFS 314

Query: 281 KPLTEQHGTGLLLIAMGITLKLLPADDK----PIKRTATSSFKVNIR 323
           KP T Q+    L++  GI L +     K     + R A++ ++  +R
Sbjct: 315 KPFTIQYLWSGLIVVFGIYLNVYSKRSKLTFADLGRMASTVYRWVLR 361

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi. Essential for viability. Involved in glycosaminoglycan synthesis and the subsequent signaling. May be involved in hh and dpp signaling by controlling the sulfation of heparan sulfate (HS).

Anopheles gambiae (taxid: 7165)

>sp|Q20787|S35B3_CAEEL Adenosine 3'-phospho 5'-phosphosulfate transporter 2 OS=Caenorhabditis elegans GN=pst-2 PE=3 SV=1

 Score =  141 bits (355), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 92/283 (32%), Positives = 156/283 (55%), Gaps = 26/283 (9%)

Query: 45  YGWYFTFIQGFVYLVLIYLQGF---TTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNY 101
           +GW  T IQ  +Y    Y +      TK+M+ PW+ Y  ++   + + GL+  S+ +LNY
Sbjct: 72  FGWTLTLIQFLIYSGCGYTECIIWHNTKRMI-PWRIYGVIAFFTVATMGLSNASVGYLNY 130

Query: 102 PAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMI 161
           P Q++FK  K++PV++ G  I G  ++Y   +  +A+L+ +G+I+FTLAD + SPNF   
Sbjct: 131 PTQVIFKCCKLIPVLIGGILIQG--KRYGWIDIGAAMLMSLGIIMFTLADNKVSPNFDSR 188

Query: 162 GVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKA- 220
           G IMI GAL+ D+ +GN+QE        ++  EM+  S  +G   +   ++L+GE+F A 
Sbjct: 189 GYIMICGALLADAVIGNIQEKNMKKYGGSSN-EMVLYSYGIGSVFIFAFVVLSGEVFSAI 247

Query: 221 -------WNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLL 273
                  W +       +G  +  +   ++G   VL+ I +FGA     VTT RKA+T++
Sbjct: 248 PFFLENSWKT-------FGYALILSCLGYLGVNVVLTHIKVFGALVAVTVTTLRKALTII 300

Query: 274 LSYLIFTKPLTEQHGTGLLLIAMGITLKLLPAD----DKPIKR 312
           LS+++F+KP T ++     ++ + I L L   +    D  I+R
Sbjct: 301 LSFMLFSKPFTIEYVYAGSVVMLAIYLNLYSKNKTSWDNMIRR 343

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi.

Caenorhabditis elegans (taxid: 6239)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	341
225453883	348	PREDICTED: adenosine 3'-phospho 5'-phosp	0.873	0.856	0.866	1e-141
356532050	358	PREDICTED: adenosine 3'-phospho 5'-phosp	0.882	0.840	0.829	1e-138
224127530	359	predicted protein [Populus trichocarpa]	0.873	0.830	0.835	1e-138
255541442	350	Adenosine 3'-phospho 5'-phosphosulfate t	0.870	0.848	0.840	1e-137
356568332	358	PREDICTED: adenosine 3'-phospho 5'-phosp	0.879	0.837	0.830	1e-137
449432205	355	PREDICTED: UDP-galactose/UDP-glucose tra	0.870	0.836	0.833	1e-136
224074825	352	predicted protein [Populus trichocarpa]	0.876	0.849	0.811	1e-136
225426765	350	PREDICTED: adenosine 3'-phospho 5'-phosp	0.870	0.848	0.843	1e-135
147845004	343	hypothetical protein VITISV_031735 [Viti	0.859	0.854	0.842	1e-135
356532052	371	PREDICTED: adenosine 3'-phospho 5'-phosp	0.882	0.811	0.796	1e-135

>gi|225453883|ref|XP_002273090.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 2 [Vitis vinifera] gi|296089139|emb|CBI38842.3| unnamed protein product [Vitis vinifera]

 Score =  507 bits (1306), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 259/299 (86%), Positives = 274/299 (91%), Gaps = 1/299 (0%)

Query: 40  RLQFSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFL 99
           RLQFSYGWYFTF+QGFVYLVLIY QGFTTKQM+NPWKTYVKLSAVLMGSHGLTKGSLAFL
Sbjct: 48  RLQFSYGWYFTFVQGFVYLVLIYFQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFL 107

Query: 100 NYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFS 159
           NYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSA+LLVVGLILFTLADA TSPNFS
Sbjct: 108 NYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSAVLLVVGLILFTLADAHTSPNFS 167

Query: 160 MIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFK 219
           +IGV+M+SGAL+MDSFLGNLQEAIFT+NP+TTQMEMLFCSTV+GLP LIPPML TGELFK
Sbjct: 168 VIGVLMVSGALVMDSFLGNLQEAIFTLNPDTTQMEMLFCSTVIGLPFLIPPMLFTGELFK 227

Query: 220 AWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIF 279
           AWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIA+FGAATTAMVTTARKAVTLLLSYLIF
Sbjct: 228 AWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIAIFGAATTAMVTTARKAVTLLLSYLIF 287

Query: 280 TKPLTEQHGTGLLLIAMGITLKLLPADDKPIKRTATSSFKVNIRKLSFSEREEADEEKR 338
           TKPLTEQHG+GLLLIAMGI LKLLP D+KP K+ +  S         F   EE  EE R
Sbjct: 288 TKPLTEQHGSGLLLIAMGIVLKLLP-DNKPYKKASLESPTTEKTANPFPREEEKSEEMR 345

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532050|ref|XP_003534587.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 2-like isoform 1 [Glycine max]

 Score =  497 bits (1279), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 258/311 (82%), Positives = 277/311 (89%), Gaps = 10/311 (3%)

Query: 40  RLQFSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFL 99
           RL FSYGWYFTF+QGFVYL LIYLQGFT+KQM+NPWKTYVKLSAVLMGSHGLTKGSLAFL
Sbjct: 48  RLHFSYGWYFTFVQGFVYLCLIYLQGFTSKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFL 107

Query: 100 NYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFS 159
           NYPAQ+MFKSTKVLPVM+MGAFIPGLRRKYP HEY+SA+LLVVGLILFTLADAQTSPNFS
Sbjct: 108 NYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPLHEYISAILLVVGLILFTLADAQTSPNFS 167

Query: 160 MIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFK 219
           MIGVIMISGAL+MDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLP LIPPML TGELFK
Sbjct: 168 MIGVIMISGALVMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPFLIPPMLFTGELFK 227

Query: 220 AWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIF 279
           AW SCSQH YVYGVLVFEAMATFIGQVSVLSLIA+FGAATTAM+TTARKAVTLLLSYLIF
Sbjct: 228 AWTSCSQHPYVYGVLVFEAMATFIGQVSVLSLIAIFGAATTAMITTARKAVTLLLSYLIF 287

Query: 280 TKPLTEQHGTGLLLIAMGITLKLLPADDK----PIKRTATSSFKVNIRKLSFSER----- 330
           TKPLTEQHG+GLLLIAMGITLK+LP D+K      KR  TSS + N  K +  E      
Sbjct: 288 TKPLTEQHGSGLLLIAMGITLKMLP-DNKFTSTKTKRVLTSSARDNGAKSTSDEELGTLP 346

Query: 331 EEADEEKRAPV 341
              + ++R P+
Sbjct: 347 NSGENDERRPL 357

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127530|ref|XP_002320097.1| predicted protein [Populus trichocarpa] gi|222860870|gb|EEE98412.1| predicted protein [Populus trichocarpa]

 Score =  496 bits (1277), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 259/310 (83%), Positives = 280/310 (90%), Gaps = 12/310 (3%)

Query: 40  RLQFSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFL 99
           RLQFSYGWYFTF+Q FVY++LIYLQGFT KQM+NPWKTYVKLSAVLMGSHGLTKGSLAFL
Sbjct: 48  RLQFSYGWYFTFVQSFVYVLLIYLQGFTPKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFL 107

Query: 100 NYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFS 159
           NYPAQ+MFKSTKVLPVMVMGAFIPGLRRKYPAHEY SALLLV GLI+FTLADA+TSPNFS
Sbjct: 108 NYPAQIMFKSTKVLPVMVMGAFIPGLRRKYPAHEYASALLLVAGLIIFTLADAKTSPNFS 167

Query: 160 MIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFK 219
           +IGV+MISGALIMD+FLGNLQEAIFT++PETTQMEMLFCS+VVGLP LIPPM+LTGELFK
Sbjct: 168 IIGVLMISGALIMDAFLGNLQEAIFTLSPETTQMEMLFCSSVVGLPFLIPPMVLTGELFK 227

Query: 220 AWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIF 279
           AWNSCSQH YVY VLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIF
Sbjct: 228 AWNSCSQHPYVYVVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIF 287

Query: 280 TKPLTEQHGTGLLLIAMGITLKLLPADDKPIKRTATS-SFKVNIRKLSFSEREE------ 332
           TKPLTEQHGTGLLLIAMGITLKLLP D  P KR+++S + K  I K S ++ E+      
Sbjct: 288 TKPLTEQHGTGLLLIAMGITLKLLP-DKNPYKRSSSSITKKAKIEKPSTNDEEKRVFQLE 346

Query: 333 ----ADEEKR 338
                DEEKR
Sbjct: 347 IEAAEDEEKR 356

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255541442|ref|XP_002511785.1| Adenosine 3'-phospho 5'-phosphosulfate transporter, putative [Ricinus communis] gi|223548965|gb|EEF50454.1| Adenosine 3'-phospho 5'-phosphosulfate transporter, putative [Ricinus communis]

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 253/301 (84%), Positives = 277/301 (92%), Gaps = 4/301 (1%)

Query: 40  RLQFSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFL 99
           RLQFSYGWYFTF+Q FVY+ LIYLQGFT  QM+NPWKTYVKLSAVLMGSHGLTKGSLAFL
Sbjct: 48  RLQFSYGWYFTFVQIFVYIFLIYLQGFTPAQMVNPWKTYVKLSAVLMGSHGLTKGSLAFL 107

Query: 100 NYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFS 159
           NYPAQ+MFKSTKVLPVMVMGAFIPGLRR+YP HEYVSALLLVVGLILFTLADA+TSPNF 
Sbjct: 108 NYPAQIMFKSTKVLPVMVMGAFIPGLRRRYPVHEYVSALLLVVGLILFTLADAKTSPNFH 167

Query: 160 MIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFK 219
            IGV+MISGALIMD+FLGNLQEAIFT+NPETTQMEMLFCS+VVGLP LIPPM+LTGELF+
Sbjct: 168 TIGVVMISGALIMDAFLGNLQEAIFTINPETTQMEMLFCSSVVGLPFLIPPMILTGELFR 227

Query: 220 AWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIF 279
           AWNSCSQH YVYGVL+FEAMATF+GQVSVLSLIALFGAATTAMVTTARKAVTLLLSY+IF
Sbjct: 228 AWNSCSQHPYVYGVLIFEAMATFVGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYMIF 287

Query: 280 TKPLTEQHGTGLLLIAMGITLKLLPADDKPIKRTATSSFKVNIRKLSFSERE---EADEE 336
           TKPLTEQHGTGLLLIAMGITLKLLP D+ P KR +++S K  I K S ++++    + EE
Sbjct: 288 TKPLTEQHGTGLLLIAMGITLKLLP-DNNPHKRNSSNSSKTKIHKSSSTDQQGTVNSQEE 346

Query: 337 K 337
           K
Sbjct: 347 K 347

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356568332|ref|XP_003552365.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 2-like isoform 1 [Glycine max]

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 259/312 (83%), Positives = 278/312 (89%), Gaps = 12/312 (3%)

Query: 40  RLQFSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFL 99
           RL FSYGWYFTF+QGFVYL LIYLQGFT+KQM+NPWKTYVKLSAVLMGSHGLTKGSLAFL
Sbjct: 48  RLHFSYGWYFTFVQGFVYLFLIYLQGFTSKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFL 107

Query: 100 NYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFS 159
           NYPAQ+MFKSTKVLPVM+MGAFIPGLRRKYP HEY+SA+LLVVGLILFTLADAQTSPNFS
Sbjct: 108 NYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPLHEYISAILLVVGLILFTLADAQTSPNFS 167

Query: 160 MIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFK 219
           MIGVIMISGAL+MDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLP LIPPML TGELFK
Sbjct: 168 MIGVIMISGALVMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPFLIPPMLFTGELFK 227

Query: 220 AWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIF 279
           AW SCSQH YVYGVLVFEAMATFIGQVSVLSLIA+FGAATTAM+TTARKAVTLLLSYLIF
Sbjct: 228 AWTSCSQHPYVYGVLVFEAMATFIGQVSVLSLIAIFGAATTAMITTARKAVTLLLSYLIF 287

Query: 280 TKPLTEQHGTGLLLIAMGITLKLLPADDK----PIKRTATSSFKVNIRKLSFSERE---- 331
           TKPLTEQHG+GLLLIAMGITLK+LP D K      KR  TSS + NI   S ++ E    
Sbjct: 288 TKPLTEQHGSGLLLIAMGITLKMLP-DSKFTSTKTKRVLTSSAR-NIGAKSTNDEELGTL 345

Query: 332 --EADEEKRAPV 341
               + ++R P+
Sbjct: 346 PNSGENDERRPL 357

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449432205|ref|XP_004133890.1| PREDICTED: UDP-galactose/UDP-glucose transporter 4-like [Cucumis sativus]

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 256/307 (83%), Positives = 276/307 (89%), Gaps = 10/307 (3%)

Query: 40  RLQFSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFL 99
           +LQFSYGWYFTFIQGFVYL LIYLQGFT KQM+NPWKTYVKLSAVLMGSHGLTKGSLAFL
Sbjct: 48  KLQFSYGWYFTFIQGFVYLFLIYLQGFTAKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFL 107

Query: 100 NYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFS 159
           NYPAQLMFKSTKVLPVM+MGAFIPGLRRKYP HEY+SA+LLVVGLI+FTLADAQTSPNFS
Sbjct: 108 NYPAQLMFKSTKVLPVMIMGAFIPGLRRKYPPHEYISAVLLVVGLIIFTLADAQTSPNFS 167

Query: 160 MIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFK 219
           ++GV+MISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLP LIPPMLLTGELFK
Sbjct: 168 ILGVVMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPFLIPPMLLTGELFK 227

Query: 220 AWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIF 279
           AW SCSQH YVYGVLVFEAMAT+IGQVSVLSLIALFGAATTAM+TTARKAVTLLLSYLIF
Sbjct: 228 AWTSCSQHKYVYGVLVFEAMATYIGQVSVLSLIALFGAATTAMITTARKAVTLLLSYLIF 287

Query: 280 TKPLTEQHGTGLLLIAMGITLKLLPADDKPIKRTATSSFKVN--------IRKLSFSERE 331
           TKPL+EQH TGLLLI MGITLKLLP D KP K  A+S+ + +          +++     
Sbjct: 288 TKPLSEQHATGLLLIGMGITLKLLP-DYKP-KNKASSNVRTSKPPANNGKDNEMAHQIEI 345

Query: 332 EADEEKR 338
           E DEE+R
Sbjct: 346 EKDEERR 352

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224074825|ref|XP_002304463.1| predicted protein [Populus trichocarpa] gi|222841895|gb|EEE79442.1| predicted protein [Populus trichocarpa]

 Score =  490 bits (1261), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 245/302 (81%), Positives = 274/302 (90%), Gaps = 3/302 (0%)

Query: 40  RLQFSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFL 99
           RLQFSYGWYFTF+QGFVYLVLIYLQGFT KQM+NPWKTY KLSAVLMGSHGLTKGSLAFL
Sbjct: 48  RLQFSYGWYFTFVQGFVYLVLIYLQGFTPKQMVNPWKTYWKLSAVLMGSHGLTKGSLAFL 107

Query: 100 NYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFS 159
           NYPAQ+MFKSTKVLPVM+MGAFIPGLRRKYP HEY+SALLLV+GLILFTLADAQTSPNFS
Sbjct: 108 NYPAQIMFKSTKVLPVMLMGAFIPGLRRKYPVHEYISALLLVIGLILFTLADAQTSPNFS 167

Query: 160 MIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFK 219
           +IGV+MISGALIMDS +GNLQEAIFTMNP+TTQ+E+LFCST+VGLP L+PPM+LTGELFK
Sbjct: 168 IIGVLMISGALIMDSLMGNLQEAIFTMNPDTTQIEVLFCSTIVGLPFLLPPMILTGELFK 227

Query: 220 AWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIF 279
           AW SC+QH YVYGVLVFEAMATF+GQ+SVLSLIA+FGAA TAM+TTARKAVTLLLSY+IF
Sbjct: 228 AWKSCAQHPYVYGVLVFEAMATFVGQISVLSLIAIFGAAATAMITTARKAVTLLLSYMIF 287

Query: 280 TKPLTEQHGTGLLLIAMGITLKLLPADDKPIKRTATSSFKVNIRK---LSFSEREEADEE 336
           TKPLTEQHGTGLLL+AMGI LK++P D KP  R+A    K + ++   L  S + E  EE
Sbjct: 288 TKPLTEQHGTGLLLLAMGIILKMVPVDYKPPTRSAARHGKSHFKEEISLGDSRKAEGAEE 347

Query: 337 KR 338
           KR
Sbjct: 348 KR 349

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225426765|ref|XP_002282676.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 2 [Vitis vinifera] gi|297742604|emb|CBI34753.3| unnamed protein product [Vitis vinifera]

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 254/301 (84%), Positives = 271/301 (90%), Gaps = 4/301 (1%)

Query: 40  RLQFSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFL 99
           RL+FSYGWYFTFIQGFVYL LIYLQGFTTKQM NPWKTYVKLSAVLMGSHGLTKGSLAFL
Sbjct: 48  RLKFSYGWYFTFIQGFVYLALIYLQGFTTKQMSNPWKTYVKLSAVLMGSHGLTKGSLAFL 107

Query: 100 NYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFS 159
           NYPAQLMFKSTKVLPVM+MGAFIPGLRRKYP HEYVSA+LLVVGLILFTLADAQTSPNFS
Sbjct: 108 NYPAQLMFKSTKVLPVMIMGAFIPGLRRKYPFHEYVSAVLLVVGLILFTLADAQTSPNFS 167

Query: 160 MIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFK 219
            IGV+MISGAL+MDSFLGNLQEAIFTMNPETTQMEMLFCSTVVG P L+ PM+LTGELFK
Sbjct: 168 SIGVLMISGALVMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGFPFLLVPMILTGELFK 227

Query: 220 AWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIF 279
           AWNSC QH YVYGVLVFEAMATF+GQVSVLSLIA+FGAATTAM+TTARKAVTLLLSY+IF
Sbjct: 228 AWNSCLQHPYVYGVLVFEAMATFVGQVSVLSLIAMFGAATTAMITTARKAVTLLLSYMIF 287

Query: 280 TKPLTEQHGTGLLLIAMGITLKLLP---ADDKPIKRTATSSFKVNIRKLSFSEREEADEE 336
           TKPLTEQHGTGLLLIAMGI LK+LP   A  +P   TA  S K   R L    R+E +E+
Sbjct: 288 TKPLTEQHGTGLLLIAMGIILKMLPDTQAPKRPTSSTAKPSSKGE-RALVEKMRDEGEEK 346

Query: 337 K 337
           +
Sbjct: 347 Q 347

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147845004|emb|CAN80578.1| hypothetical protein VITISV_031735 [Vitis vinifera]

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 252/299 (84%), Positives = 267/299 (89%), Gaps = 6/299 (2%)

Query: 40  RLQFSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFL 99
           RLQFSYGWYFTF+QGFVYLVLIY QGFTTKQM+NPWKTYVKLSAVLMGSHGLTKGSLAFL
Sbjct: 48  RLQFSYGWYFTFVQGFVYLVLIYFQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFL 107

Query: 100 NYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFS 159
           NYPA     S  VLPVMVMGAFIPGLRRKYPAHEYVSA+LLVVGLILFTLADA TSPNFS
Sbjct: 108 NYPA-----SAHVLPVMVMGAFIPGLRRKYPAHEYVSAVLLVVGLILFTLADAHTSPNFS 162

Query: 160 MIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFK 219
           +IGV+M+SGAL+MDSFLGNLQEAIFT+NP+TTQMEMLFCSTV+GLP LIPPML TGELFK
Sbjct: 163 VIGVLMVSGALVMDSFLGNLQEAIFTLNPDTTQMEMLFCSTVIGLPFLIPPMLFTGELFK 222

Query: 220 AWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIF 279
           AWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIA+FGAATTAMVTTARKAVTLLLSYLIF
Sbjct: 223 AWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIAIFGAATTAMVTTARKAVTLLLSYLIF 282

Query: 280 TKPLTEQHGTGLLLIAMGITLKLLPADDKPIKRTATSSFKVNIRKLSFSEREEADEEKR 338
           TKPLTEQHG+GLLLIAMGI LKLLP D+KP K+ +  S         F   EE  EE R
Sbjct: 283 TKPLTEQHGSGLLLIAMGIVLKLLP-DNKPYKKASLESPTTEKTANPFPREEEKSEEMR 340

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532052|ref|XP_003534588.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 2-like isoform 2 [Glycine max]

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 258/324 (79%), Positives = 277/324 (85%), Gaps = 23/324 (7%)

Query: 40  RLQFSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFL 99
           RL FSYGWYFTF+QGFVYL LIYLQGFT+KQM+NPWKTYVKLSAVLMGSHGLTKGSLAFL
Sbjct: 48  RLHFSYGWYFTFVQGFVYLCLIYLQGFTSKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFL 107

Query: 100 NYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFS 159
           NYPAQ+MFKSTKVLPVM+MGAFIPGLRRKYP HEY+SA+LLVVGLILFTLADAQTSPNFS
Sbjct: 108 NYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPLHEYISAILLVVGLILFTLADAQTSPNFS 167

Query: 160 MIGVIMISGALIMDSFLGNLQEAIFTMNPET-------------TQMEMLFCSTVVGLPM 206
           MIGVIMISGAL+MDSFLGNLQEAIFTMNPET             TQMEMLFCSTVVGLP 
Sbjct: 168 MIGVIMISGALVMDSFLGNLQEAIFTMNPETTQPYKISNTFSLLTQMEMLFCSTVVGLPF 227

Query: 207 LIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTA 266
           LIPPML TGELFKAW SCSQH YVYGVLVFEAMATFIGQVSVLSLIA+FGAATTAM+TTA
Sbjct: 228 LIPPMLFTGELFKAWTSCSQHPYVYGVLVFEAMATFIGQVSVLSLIAIFGAATTAMITTA 287

Query: 267 RKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADDK----PIKRTATSSFKVNI 322
           RKAVTLLLSYLIFTKPLTEQHG+GLLLIAMGITLK+LP D+K      KR  TSS + N 
Sbjct: 288 RKAVTLLLSYLIFTKPLTEQHGSGLLLIAMGITLKMLP-DNKFTSTKTKRVLTSSARDNG 346

Query: 323 RKLSFSER-----EEADEEKRAPV 341
            K +  E         + ++R P+
Sbjct: 347 AKSTSDEELGTLPNSGENDERRPL 370

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	341
TAIR|locus:2195032	349	AT1G12600 "AT1G12600" [Arabido	0.870	0.851	0.765	2e-118
ZFIN|ZDB-GENE-060312-46	386	slc35b3 "solute carrier family	0.806	0.712	0.345	7.8e-39
UNIPROTKB|F1P4W7	387	SLC35B3 "Uncharacterized prote	0.809	0.713	0.354	4.3e-38
UNIPROTKB|E2RJI8	369	SLC35B3 "Uncharacterized prote	0.750	0.693	0.354	3e-37
UNIPROTKB|F1RV99	369	SLC35B3 "Uncharacterized prote	0.774	0.715	0.348	4.9e-37
UNIPROTKB|Q9H1N7	401	SLC35B3 "Adenosine 3'-phospho	0.750	0.638	0.347	2.1e-36
UNIPROTKB|Q29EY2	392	Papst2 "Adenosine 3'-phospho 5	0.797	0.693	0.334	2.7e-36
UNIPROTKB|E1BLS0	430	SLC35B3 "Uncharacterized prote	0.747	0.593	0.344	3.5e-36
RGD|1307183	369	Slc35b3 "solute carrier family	0.747	0.691	0.356	4.4e-36
UNIPROTKB|Q17CE7	382	Papst2 "Adenosine 3'-phospho 5	0.797	0.712	0.332	7.2e-36

TAIR|locus:2195032 AT1G12600 "AT1G12600" [Arabidopsis thaliana (taxid:3702)]

 Score = 1166 (415.5 bits), Expect = 2.0e-118, P = 2.0e-118
 Identities = 229/299 (76%), Positives = 252/299 (84%)

Query:    40 RLQFSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFL 99
             RL+FSYGWYFTF QG VY+ LIY+ GF TKQM+NPWKTYVKLS VLMGSHGLTKGSLA+L
Sbjct:    50 RLKFSYGWYFTFAQGLVYIALIYMYGFRTKQMVNPWKTYVKLSGVLMGSHGLTKGSLAYL 109

Query:   100 NYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYXXXXXXXXXXXXXXXADAQTSPNFS 159
             NYPAQ+MFKSTKVLPVMVMGAFIPGLRRKYP HEY               ADA TSPNFS
Sbjct:   110 NYPAQIMFKSTKVLPVMVMGAFIPGLRRKYPVHEYISAMLLVIGLILFTLADAHTSPNFS 169

Query:   160 MIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFK 219
             +IGV+MISGALIMD+FLGNLQEAIFTMNPETTQMEMLFCSTVVGLP L+ PM+LTGELF 
Sbjct:   170 IIGVMMISGALIMDAFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPFLLAPMILTGELFT 229

Query:   220 AWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIF 279
             AWNSC+QH YVYGVLVFEAMATFIGQVSVLSLIALFGAATTAM+TTARKAVTLLLSYLIF
Sbjct:   230 AWNSCAQHPYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMITTARKAVTLLLSYLIF 289

Query:   280 TKPLTEQHGTGLLLIAMGITLKLLPADDKPIKRTATSSFKVNIRKLSFSEREEADEEKR 338
             TKPLTEQHGTGLLLI MGI LK++P  +   K + +      + ++ F E+E+ DEE R
Sbjct:   290 TKPLTEQHGTGLLLIFMGIILKMVPDPNPNPKSSGSGQTPGKLERVKF-EKED-DEESR 346

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0055085 "transmembrane transport" evidence=IEA

ZFIN|ZDB-GENE-060312-46 slc35b3 "solute carrier family 35, member B3" [Danio rerio (taxid:7955)]

 Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
 Identities = 97/281 (34%), Positives = 156/281 (55%)

Query:    45 YGWYFTFIQ-GFVYLV-LIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYP 102
             +GWY T +Q GF  L  L+ LQ    K+   P KTY+ ++ + +G+ GL+  SL +LNYP
Sbjct:    96 FGWYLTLVQFGFYSLFGLVELQLTQDKRRRIPCKTYMIIAFLTVGTMGLSNTSLGYLNYP 155

Query:   103 AQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYXXXXXXXXXXXXXXXADAQTSPNFSMIG 162
              Q++FK  K++PVM+ G FI G  ++Y   +                AD++ +PNF++ G
Sbjct:   156 TQVIFKCCKLIPVMIGGVFIQG--KRYNVADVSAALCMSLGLIWFTLADSKIAPNFNVTG 213

Query:   163 VIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWN 222
             V++IS AL  D+ +GN+QE    ++   +  EM+  S  +G   ++  +L  G L  A +
Sbjct:   214 VLLISLALCADAAIGNVQEKAMKLH-NGSNSEMVLYSYSIGFVYILLGLLSLGGLGPAVS 272

Query:   223 SCSQH-LYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTK 281
              C+QH +  YG     ++  + G   VL+LI LFGA     VTT RKA+T++LS+L F+K
Sbjct:   273 FCAQHPMTTYGYAFLFSLTGYFGISFVLALIKLFGALVAVTVTTGRKAMTIVLSFLFFSK 332

Query:   282 PLTEQHGTGLLLIAMGITLKLLPADDKPIKRTATSSFKVNI 322
             P T Q+  G LL+  GI L +   +   +K  + +  +  +
Sbjct:   333 PFTFQYVWGGLLVVFGIFLNVYSKNKDKMKLPSLAELRKRV 373

GO:0055085 "transmembrane transport" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1P4W7 SLC35B3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
 Identities = 101/285 (35%), Positives = 155/285 (54%)

Query:    45 YGWYFTFIQ-GFVYLV--LIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNY 101
             +GWY T +Q GF Y V  LI LQ    K+   P KTY+ ++ + +G+ GL+  SL +LNY
Sbjct:    97 FGWYLTLVQFGF-YSVFGLIELQLIQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNY 155

Query:   102 PAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYXXXXXXXXXXXXXXXADAQTSPNFSMI 161
             P Q++FK  K++PVMV G FI G  ++Y   +                AD+  +PNF++ 
Sbjct:   156 PTQVIFKCCKLIPVMVGGVFIQG--KRYNIADVSAALCMSLGLIWFTLADSTVAPNFNLT 213

Query:   162 GVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAW 221
             GV++IS AL  D+ +GN+QE    ++   +  EM+  S  +G   ++  +  T  L  A 
Sbjct:   214 GVVLISLALCADAVIGNVQEKAMKLH-NGSNSEMVLYSYSIGFLYILLGLTCTSGLSPAV 272

Query:   222 NSCSQH-LYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFT 280
               CSQH +  YG     ++  + G   VL+LI +FGA     VTT RKA+T++LS+L F 
Sbjct:   273 AFCSQHPIQTYGYAFLFSLTGYFGISFVLALIKIFGALLAVTVTTGRKAMTIVLSFLFFA 332

Query:   281 KPLTEQHGTGLLLIAMGITLKLLPADDKPIKRTATSS-FKVNIRK 324
             KP T Q+    LL+ +GI L +   +   IK  +    +K N+ +
Sbjct:   333 KPFTFQYVWSGLLVVLGIFLNVYSKNMDKIKLPSLHGIWKKNVEE 377

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|E2RJI8 SLC35B3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
 Identities = 93/262 (35%), Positives = 145/262 (55%)

Query:    44 SYGWYFTFIQGFVYLV--LIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNY 101
             SYGWY T +Q   Y +  LI LQ    K+   P KTY+ ++ + +G+ GL+  SL +LNY
Sbjct:    78 SYGWYLTLVQFAFYSIFGLIELQLIQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNY 137

Query:   102 PAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYXXXXXXXXXXXXXXXADAQTSPNFSMI 161
             P Q++FK  K++PVM+ G FI G  ++Y   +                AD+  +PNF++ 
Sbjct:   138 PTQVIFKCCKLIPVMLGGVFIQG--KRYNIADVSAAVCMSLGLIWFTLADSTIAPNFNLT 195

Query:   162 GVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAW 221
             GVI+IS AL  D+ +GN+QE    ++   +  EM+  S  +G   ++  +  T  L  A 
Sbjct:   196 GVILISLALCADAVIGNVQEKAMKLH-NASNSEMVLYSYSIGFVYILLGLTCTSGLGPAV 254

Query:   222 NSCSQH-LYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFT 280
               CS++ +  YG     ++  + G   VL+LI +FGA     VTT RKA+T++LS++ F 
Sbjct:   255 TFCSKNPIQTYGYAFLFSLTGYFGISFVLALIKIFGALLAVTVTTGRKAMTIVLSFMFFA 314

Query:   281 KPLTEQHGTGLLLIAMGITLKL 302
             KP T Q+    LL+ +GI L +
Sbjct:   315 KPFTFQYVWSGLLVVLGIFLNV 336

GO:0005739 "mitochondrion" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

UNIPROTKB|F1RV99 SLC35B3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
 Identities = 94/270 (34%), Positives = 147/270 (54%)

Query:    45 YGWYFTFIQGFVYLV--LIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYP 102
             YGWY T +Q   Y +  LI LQ    K+   P KTY+ ++ + +G+ GL+  SL +LNYP
Sbjct:    79 YGWYLTLVQFAFYSIFGLIELQLIQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYP 138

Query:   103 AQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYXXXXXXXXXXXXXXXADAQTSPNFSMIG 162
              Q++FK  K++PVM+ G FI G  ++Y   +                AD+  +PNF++ G
Sbjct:   139 TQVIFKCCKLIPVMLGGVFIQG--KRYNVADVSAALCMSLGLIWFTLADSTVAPNFNLTG 196

Query:   163 VIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWN 222
             VI+IS AL  D+ +GN+QE    ++   +  EM+  S  +G   ++  +  T  L  A  
Sbjct:   197 VILISLALCADAVIGNVQEKAMKLH-NASNSEMVLYSYSIGFVYILLGLTCTSGLGPAVT 255

Query:   223 SCSQH-LYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTK 281
              CS++ +  YG     ++  + G   VL+LI +FGA     VTT RKA+T++LS++ F K
Sbjct:   256 FCSKNPVRTYGYAFLFSLTGYFGISFVLALIKIFGALLAVTVTTGRKAMTIVLSFIFFAK 315

Query:   282 PLTEQHGTGLLLIAMGITLKLLPADDKPIK 311
             P T Q+    LL+ +GI L +   +   IK
Sbjct:   316 PFTFQYVWSGLLVVLGIFLNVYSKNMDKIK 345

GO:0005739 "mitochondrion" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

UNIPROTKB|Q9H1N7 SLC35B3 "Adenosine 3'-phospho 5'-phosphosulfate transporter 2" [Homo sapiens (taxid:9606)]

 Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
 Identities = 91/262 (34%), Positives = 145/262 (55%)

Query:    44 SYGWYFTFIQGFVYLV--LIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNY 101
             S GWY T +Q   Y +  LI LQ    K+   P KTY+ ++ + +G+ GL+  SL +LNY
Sbjct:   110 SCGWYLTLVQFAFYSIFGLIELQLIQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNY 169

Query:   102 PAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYXXXXXXXXXXXXXXXADAQTSPNFSMI 161
             P Q++FK  K++PVM+ G FI G  ++Y   +                AD+ T+PNF++ 
Sbjct:   170 PTQVIFKCCKLIPVMLGGVFIQG--KRYNVADVSAAICMSLGLIWFTLADSTTAPNFNLT 227

Query:   162 GVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAW 221
             GV++IS AL  D+ +GN+QE    ++   +  EM+  S  +G   ++  +  T  L  A 
Sbjct:   228 GVVLISLALCADAVIGNVQEKAMKLH-NASNSEMVLYSYSIGFVYILLGLTCTSGLGPAV 286

Query:   222 NSCSQH-LYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFT 280
               C+++ +  YG     ++  + G   VL+LI +FGA     VTT RKA+T++LS++ F 
Sbjct:   287 TFCAKNPVRTYGYAFLFSLTGYFGISFVLALIKIFGALIAVTVTTGRKAMTIVLSFIFFA 346

Query:   281 KPLTEQHGTGLLLIAMGITLKL 302
             KP T Q+    LL+ +GI L +
Sbjct:   347 KPFTFQYVWSGLLVVLGIFLNV 368

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

UNIPROTKB|Q29EY2 Papst2 "Adenosine 3'-phospho 5'-phosphosulfate transporter 2" [Drosophila pseudoobscura pseudoobscura (taxid:46245)]

 Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
 Identities = 97/290 (33%), Positives = 157/290 (54%)

Query:    45 YGWYFTFIQGFVY----LVLIYLQGFTT--KQMMN--------PWKTYVKLSAVLMGSHG 90
             +GW+ T +Q   Y    LV   L+ + +  + + N        P KTY+ L+A+ +G+ G
Sbjct:    88 FGWFLTLVQFGYYIGFGLVERRLEAYRSGRRSLWNVEPAPRCIPMKTYLVLAALTLGTMG 147

Query:    91 LTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYXXXXXXXXXXXXXXXA 150
             L+  SL +LNYP Q++FK  K++PV+V    I G  ++Y   ++               A
Sbjct:   148 LSNSSLGYLNYPTQVIFKCCKLIPVLVGSILIQG--KRYGPLDFAAASCMCIGLAWFTLA 205

Query:   151 DAQTSPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPP 210
             D+Q +PNF+++GV MISGAL+ D+ +GN+QE     + +    E++F S  +G   L   
Sbjct:   206 DSQMTPNFNLLGVAMISGALLCDAAIGNVQEKAMKEH-KAPSSEVVFYSYGLGFVYLFVI 264

Query:   211 MLLTGELFKAWNSCSQH-LYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKA 269
             ML+TG  F  +  C +H L  +G     +++ ++G   VL+L+   GA   A VTTARKA
Sbjct:   265 MLVTGNFFSGFAFCLEHPLQTFGYGFLFSLSGYLGIQFVLALVRSSGAPIAATVTTARKA 324

Query:   270 VTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADDKPIKRTATSSFK 319
             VT+  S+++F+KP T Q+    L++ +GI L +    +K       S FK
Sbjct:   325 VTIAFSFVLFSKPFTVQYLWSGLIVVLGIYLNVYSKKNKLTFADIRSRFK 374

GO:0005794 "Golgi apparatus" evidence=ISS

GO:0046963 "3'-phosphoadenosine 5'-phosphosulfate transport" evidence=ISS

GO:0046964 "3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity" evidence=ISS

UNIPROTKB|E1BLS0 SLC35B3 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
 Identities = 90/261 (34%), Positives = 142/261 (54%)

Query:    45 YGWYFTFIQGFVYLV--LIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYP 102
             YGWY T +Q   Y +  LI LQ    K+   P KTY+ ++ + +G+ GL+  SL +LNYP
Sbjct:   140 YGWYLTLVQFAFYSIFGLIELQLIQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYP 199

Query:   103 AQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYXXXXXXXXXXXXXXXADAQTSPNFSMIG 162
              Q++FK  K++PVM+ G FI G  ++Y   +                AD+  +PNF++ G
Sbjct:   200 TQVIFKCCKLIPVMLGGVFIQG--KRYNVADVSAALCMSLGLIWFTLADSTVAPNFNLTG 257

Query:   163 VIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWN 222
             V++IS AL  D+ +GN+QE    ++   +  EM+  S  +G   ++  +  T  L  A  
Sbjct:   258 VVLISLALCADAVIGNVQEKAMKLH-NASNSEMVLYSYSIGFVYILLGLTCTSGLGPAVT 316

Query:   223 SCSQH-LYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTK 281
              CS+  +  YG     ++  + G   VL+LI +FGA     VTT RKA+T++LS++ F K
Sbjct:   317 FCSKDPIRTYGYAFLFSLTGYFGISFVLALIKIFGALLAVTVTTGRKAMTIVLSFIFFAK 376

Query:   282 PLTEQHGTGLLLIAMGITLKL 302
             P T Q+     L+ +GI L +
Sbjct:   377 PFTFQYVWSGFLVVLGIFLNV 397

GO:0005739 "mitochondrion" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

RGD|1307183 Slc35b3 "solute carrier family 35, member B3" [Rattus norvegicus (taxid:10116)]

 Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
 Identities = 93/261 (35%), Positives = 144/261 (55%)

Query:    45 YGWYFTFIQGFVYLV--LIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYP 102
             YGWY T +Q   Y V  LI LQ    K+   P KTY+ ++ + +G+ GL+  SL +LNYP
Sbjct:    79 YGWYLTLVQFAFYSVFGLIELQLTQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYP 138

Query:   103 AQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYXXXXXXXXXXXXXXXADAQTSPNFSMIG 162
              Q++FK  K++PVM+ G FI G  ++Y   +                AD+  +PNF++ G
Sbjct:   139 TQVIFKCCKLIPVMLGGVFIQG--KRYNLADVSAAVCMSLGLIWFTLADSTIAPNFNLTG 196

Query:   163 VIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWN 222
             V++IS AL  D+ +GN+QE    ++   +  EM+  S  +G   ++  +  T  L  A  
Sbjct:   197 VMLISLALCADAVIGNVQEKAMKLH-NASNSEMVLYSYSIGFVYILLGLSCTSGLGPALA 255

Query:   223 SCSQH-LYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTK 281
              CS++ +  YG     ++  + G   VL+LI +FGA     VTT RKA+T++LS+L F K
Sbjct:   256 FCSKNPVRTYGYAFLFSLTGYFGISFVLALIKIFGALLAVTVTTGRKAMTIVLSFLFFAK 315

Query:   282 PLTEQHGTGLLLIAMGITLKL 302
             P T Q+    LL+ +GI L +
Sbjct:   316 PFTFQYIWSGLLVVLGIFLNV 336

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

UNIPROTKB|Q17CE7 Papst2 "Adenosine 3'-phospho 5'-phosphosulfate transporter 2" [Aedes aegypti (taxid:7159)]

 Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
 Identities = 94/283 (33%), Positives = 153/283 (54%)

Query:    45 YGWYFTFIQGFVYLVLIYLQ-GFTTKQMMN--PWKTYVKLSAVLMGSHGLTKGSLAFLNY 101
             YGW+ T +Q   Y V  Y++    +K++    P KTYV L+ + +G+ GL+  SL +LNY
Sbjct:    84 YGWFLTLVQFAYYTVFGYVERSLESKRVPRCIPMKTYVLLAFLTLGTMGLSNSSLGYLNY 143

Query:   102 PAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYXXXXXXXXXXXXXXXADAQTSPNFSMI 161
             P Q++FK  K++PV++    I G  +K+   ++               AD+Q SPNF+  
Sbjct:   144 PTQVIFKCCKLVPVLIGSILIQG--KKHGPLDFLAAIAMCLGLTLFTLADSQVSPNFNPF 201

Query:   162 GVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAW 221
             GV++IS AL+ D+ +GN+QE     + +    E++  S  +G   L   MLLTG LF   
Sbjct:   202 GVLLISLALLCDAAIGNVQEKAMREH-KAPNNEVVIYSYGIGFVYLSVIMLLTGNLFSGI 260

Query:   222 NSCSQH-LYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFT 280
               C ++ +  +G     +++ ++G   VL+L+   GA   A VTTARKAVT+ LS++ F+
Sbjct:   261 TFCMKYPVETFGYAFLFSLSGYLGIQIVLTLVRTCGAPLAATVTTARKAVTIALSFVFFS 320

Query:   281 KPLTEQHGTGLLLIAMGITLKLLPADDK----PIKRTATSSFK 319
             KP T  +    L++ +GI L +     K     + RTA   ++
Sbjct:   321 KPFTINYLWSGLIVVLGIYLNVYSKRSKLTFADLNRTAERIYR 363

GO:0005794 "Golgi apparatus" evidence=ISS

GO:0046963 "3'-phosphoadenosine 5'-phosphosulfate transport" evidence=ISS

GO:0046964 "3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q29Q28	UTR2_ARATH	No assigned EC number	0.7953	0.8739	0.8637	no	no
Q9LDX3	UTR4_ARATH	No assigned EC number	0.8026	0.8709	0.8510	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	341
pfam08449	303	pfam08449, UAA, UAA transporter family	4e-73
pfam03151	149	pfam03151, TPT, Triose-phosphate Transporter famil	7e-08
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	0.001

>gnl|CDD|219846 pfam08449, UAA, UAA transporter family

 Score =  228 bits (583), Expect = 4e-73
 Identities = 96/272 (35%), Positives = 148/272 (54%), Gaps = 14/272 (5%)

Query: 44  SYGWYFTFIQGFVYLVLIYLQGFTT---KQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLN 100
            +G   TF Q     ++  L        K    P KTYV + A    S  L   +L +++
Sbjct: 30  PFGNLLTFAQFLFISLVGLLYLLLFKKLKPRKIPLKTYVLIVATFFLSSVLNNEALKYIS 89

Query: 101 YPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFS- 159
           YP  ++FKS K++PVM++G  I    ++Y + +Y+SALL+ +G+I+FTLA A+ S N   
Sbjct: 90  YPTHVIFKSCKLIPVMILGILI--YGKRYSSLQYLSALLITLGVIIFTLASAKDSKNSKL 147

Query: 160 -----MIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLT 214
                 +G+ ++ GAL+MD+  GN QE ++    + +  EM+F S ++ LP  +  +L  
Sbjct: 148 TTFSDNVGIALLFGALLMDALTGNTQEKLYKKYGKHS-KEMMFYSHLLSLPFFLLGLLDI 206

Query: 215 GE--LFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTL 272
               LF A + C +H  V   L+  ++  ++GQ  V  LI+ FGA T  +VTT RK V+L
Sbjct: 207 RTGLLFSAESFCLRHPSVLFYLLLNSLTQYVGQFFVFYLISEFGALTVTLVTTLRKFVSL 266

Query: 273 LLSYLIFTKPLTEQHGTGLLLIAMGITLKLLP 304
           LLS L+F  PLT Q   G LL+ +GI L    
Sbjct: 267 LLSVLLFGNPLTLQQWLGTLLVFLGIFLYAYL 298

This family includes transporters with a specificity for UDP-N-acetylglucosamine. Length = 303

>gnl|CDD|217390 pfam03151, TPT, Triose-phosphate Transporter family

 Score = 50.6 bits (122), Expect = 7e-08
 Identities = 28/146 (19%), Positives = 61/146 (41%), Gaps = 7/146 (4%)

Query: 162 GVIMISGALIMDSFLGNLQEAIFTMNPETTQ--MEMLFCSTVVGLPMLIPPMLLTGELFK 219
           G I+   A  + +    L + +      T    +E+L+  + V   +L+P +L +     
Sbjct: 1   GFILALAASALFALRLILSQKLLKKKKGTKLNVLELLYYLSPVAFIVLLPGLLFSEGFKL 60

Query: 220 AWNSCS-----QHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLL 274
                      +      +L+   +  F+  +S   L+      T+++  T ++ V ++L
Sbjct: 61  GKFILKFFGDLKTSRYVLLLLLSGVLAFLYNLSAFGLLGRTSPLTSSVAGTVKRVVVIVL 120

Query: 275 SYLIFTKPLTEQHGTGLLLIAMGITL 300
           S +IF  P+T  +  GL +  +G+ L
Sbjct: 121 SVIIFGDPVTFLNILGLAIAILGVVL 146

This family includes transporters with a specificity for triose phosphate. Length = 149

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 40.2 bits (94), Expect = 0.001
 Identities = 44/258 (17%), Positives = 94/258 (36%), Gaps = 10/258 (3%)

Query: 43  FSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYP 102
                    I   + L L+ L+    +  + PW   + L+ + +    L    LA     
Sbjct: 37  LFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFLLLF-LALKYTS 95

Query: 103 AQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIG 162
           A +      +LP+      +  L  +  +   +  +LL +  +L  L         S++G
Sbjct: 96  ASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLG 155

Query: 163 VIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWN 222
           +++   A ++ +    L + +  + P T     L    ++ L +L+   L          
Sbjct: 156 LLLALAAALLWALYTALVKRLSRLGPVTL---ALLLQLLLALLLLLLFFLSGFGAPILSR 212

Query: 223 SCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKP 282
           +    LY+         +T +  +     + L GA+  A+++        LL  L+  +P
Sbjct: 213 AWLLLLYLG------VFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEP 266

Query: 283 LTEQHGTGLLLIAMGITL 300
           L+     G  L+ +G+ L
Sbjct: 267 LSPAQLLGAALVVLGVLL 284

Length = 292

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	341
KOG1582	367	consensus UDP-galactose transporter related protei	100.0
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	100.0
KOG1580	337	consensus UDP-galactose transporter related protei	100.0
KOG1581	327	consensus UDP-galactose transporter related protei	100.0
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	100.0
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	100.0
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.98
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.96
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.96
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.95
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.95
PLN00411	358	nodulin MtN21 family protein; Provisional	99.94
PRK11689	295	aromatic amino acid exporter; Provisional	99.92
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.92
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.9
PRK11272	292	putative DMT superfamily transporter inner membran	99.9
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.89
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.89
PRK15430	296	putative chloramphenical resistance permease RarD;	99.89
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.87
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.83
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.77
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.75
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.74
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.73
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.73
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.68
KOG2765	416	consensus Predicted membrane protein [Function unk	99.66
COG2962	293	RarD Predicted permeases [General function predict	99.66
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.65
KOG2766	336	consensus Predicted membrane protein [Function unk	99.61
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	99.6
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.52
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.39
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	98.99
COG2510	140	Predicted membrane protein [Function unknown]	98.98
PRK15430	296	putative chloramphenical resistance permease RarD;	98.81
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.77
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	98.63
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.62
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.59
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.59
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.51
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.45
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	98.43
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.42
PLN00411	358	nodulin MtN21 family protein; Provisional	98.27
COG2510	140	Predicted membrane protein [Function unknown]	98.27
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.19
COG2962	293	RarD Predicted permeases [General function predict	98.17
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.04
PRK11272	292	putative DMT superfamily transporter inner membran	97.89
PRK11689	295	aromatic amino acid exporter; Provisional	97.87
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	97.84
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.8
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	97.8
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	97.79
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.71
PRK10532	293	threonine and homoserine efflux system; Provisiona	97.68
COG0697	292	RhaT Permeases of the drug/metabolite transporter	97.59
KOG2922	335	consensus Uncharacterized conserved protein [Funct	97.58
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.57
PRK13499	345	rhamnose-proton symporter; Provisional	97.56
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.5
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.48
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.41
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.39
PRK13499	345	rhamnose-proton symporter; Provisional	97.35
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.35
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.35
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	97.22
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.2
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	97.11
COG2076	106	EmrE Membrane transporters of cations and cationic	97.07
COG2076	106	EmrE Membrane transporters of cations and cationic	97.05
PRK11431	105	multidrug efflux system protein; Provisional	97.01
PRK11431	105	multidrug efflux system protein; Provisional	96.98
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.98
PRK09541	110	emrE multidrug efflux protein; Reviewed	96.95
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.88
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	96.84
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	96.19
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.01
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	95.97
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	95.57
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	95.54
KOG4510	346	consensus Permease of the drug/metabolite transpor	95.45
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	95.3
KOG2765	416	consensus Predicted membrane protein [Function unk	95.29
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	95.03
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	94.79
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	94.06
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	91.36
PF08507	136	COPI_assoc: COPI associated protein; InterPro: IPR	90.38
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	89.12
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	89.12
KOG3912	372	consensus Predicted integral membrane protein [Gen	88.76
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	88.38
KOG1581	327	consensus UDP-galactose transporter related protei	87.58
PRK06638	198	NADH:ubiquinone oxidoreductase subunit J; Provisio	87.13
KOG1580	337	consensus UDP-galactose transporter related protei	86.09
PRK01637	286	hypothetical protein; Reviewed	83.94
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	82.75

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=100.00  E-value=3.1e-39  Score=282.48  Aligned_cols=318  Identities=42%  Similarity=0.703  Sum_probs=275.3

Q ss_pred             CCCchhHHHHHHHHHHHHH--------HHhhccCC-hhHHHHHHHHHHHHHHHH--HhcCCCCCCCchhHHHHHHHHHHH
Q 019428           18 NGNNFSFALLGSSLVISSM--------ASARLQFS-YGWYFTFIQGFVYLVLIY--LQGFTTKQMMNPWKTYVKLSAVLM   86 (341)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~--------i~~~~~F~-~~~~lt~~q~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~   86 (341)
                      +++--+|++|++++|..+.        +|++.+|+ |+|.+|+.|++++..+..  .+.++.+++..|||.|..++.+..
T Consensus        38 kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~~k~r~iP~rtY~~la~~t~  117 (367)
T KOG1582|consen   38 KPKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQTKRRVIPWRTYVILAFLTV  117 (367)
T ss_pred             CchhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEeecccceecchhHhhhhHhhhh
Confidence            3445689999999998874        66777886 999999999999876655  356777788899999999999999


Q ss_pred             hhHHHHHHhhcCCchhHHHHHhhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHHhccCCCCCCCchHHHHHHH
Q 019428           87 GSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMI  166 (341)
Q Consensus        87 ~~~~l~~~sl~~is~~~~~l~ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~~G~~l~  166 (341)
                      +++.++|-|+.|+++|++.++|+|+.++|++.+.++  -++|+.+.++.+..+.++|++.+...|.+.+++++..|+.++
T Consensus       118 gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifI--qGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~mI  195 (367)
T KOG1582|consen  118 GTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFI--QGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVMMI  195 (367)
T ss_pred             hccccCcCccccccCcHHHHHHhhhhhhhhheeeee--ccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeHHHH
Confidence            999999999999999999999999999999999999  689999999999999999999999999998899999999999


Q ss_pred             HHHHHHHHhHHHHHHHHhhhCCCCChHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchH-HHHHHHHHHHHHHHHH
Q 019428          167 SGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLY-VYGVLVFEAMATFIGQ  245 (341)
Q Consensus       167 l~a~~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~-~~~~l~l~~~~~~l~~  245 (341)
                      -+|.+++|+....||+.+++++. +..++++|+..++.++++....++||+.+++++...||. ...+.++.+..+++++
T Consensus       196 sgALl~DA~iGNvQEk~m~~~~~-ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~~gylG~  274 (367)
T KOG1582|consen  196 SGALLADAVIGNVQEKAMKMNPA-SSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSLAGYLGI  274 (367)
T ss_pred             HHHHHHHHHhhHHHHHHHhhCCC-CcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHHHhHhhH
Confidence            99999999999999999998763 568999999999999998888899999999998888886 6677777788889999


Q ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhccCCCCcccccccccchhhhhhh
Q 019428          246 VSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADDKPIKRTATSSFKVNIRKL  325 (341)
Q Consensus       246 ~~~~~~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~~k~~~~~~~~~~~~~~~~~~~~  325 (341)
                      .+....++..||.+++.+++.|+.+++++|+++|.+|+|.++.-|..+++.|+++..+.|+.+.+..+-.+...+..+  
T Consensus       275 ~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~nk~~~~~~~~r~~~~~~--  352 (367)
T KOG1582|consen  275 VFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKRNKIPLASLIRRIVARAA--  352 (367)
T ss_pred             HHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCCCCCchhhHHhhhhhhhc--
Confidence            999999999999999999999999999999999999999999999999999999999887433322111111112111  


Q ss_pred             cccccccccccccCCC
Q 019428          326 SFSEREEADEEKRAPV  341 (341)
Q Consensus       326 ~~~~~~~~~~~~~~~~  341 (341)
                       ++-|-|+|+|++..|
T Consensus       353 -g~~~~~~~r~~~~~V  367 (367)
T KOG1582|consen  353 -GKVDRSVDRKDPMLV  367 (367)
T ss_pred             -cccccccccccccCC
Confidence             555566777777665

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=100.00  E-value=1e-36  Score=284.79  Aligned_cols=283  Identities=31%  Similarity=0.510  Sum_probs=245.0

Q ss_pred             hHHHHHHHHHHHHHHHhhccCC-hhHHHHHHHHHHHHHHHHH--hcCC-CCCCCchhHHHHHHHHHHHhhHHHHHHhhcC
Q 019428           23 SFALLGSSLVISSMASARLQFS-YGWYFTFIQGFVYLVLIYL--QGFT-TKQMMNPWKTYVKLSAVLMGSHGLTKGSLAF   98 (341)
Q Consensus        23 ~~~~~~~~~~~~~~i~~~~~F~-~~~~lt~~q~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~sl~~   98 (341)
                      .|..+++..+..+.+..+..+. +|++++++|++...+.+..  ...+ +++++.|+++|++.++++.++..++|.|++|
T Consensus         8 i~~~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~   87 (303)
T PF08449_consen    8 IFGGCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPKSRKIPLKKYAILSFLFFLASVLSNAALKY   87 (303)
T ss_pred             HHHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccCCCcChHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            3445555555666666655555 8999999999987766553  2222 4456889999999999999999999999999


Q ss_pred             CchhHHHHHhhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHHhccCCCCCCCc------hHHHHHHHHHHHHH
Q 019428           99 LNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNF------SMIGVIMISGALIM  172 (341)
Q Consensus        99 is~~~~~l~ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~~~~~~~~~~~------~~~G~~l~l~a~~~  172 (341)
                      +|+|+++++|+++|++++++++++  +|||++++|+++++++++|++++...|.+.+.+.      ...|++++++|.++
T Consensus        88 i~~p~~~~~ks~~~i~vmi~~~l~--~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~  165 (303)
T PF08449_consen   88 ISYPTQIVFKSSKPIPVMILGVLI--LGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLL  165 (303)
T ss_pred             CChHHHHHHhhhHHHHHHHHHHHh--cCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHH
Confidence            999999999999999999999999  9999999999999999999999998775432211      23499999999999


Q ss_pred             HHhHHHHHHHHhhhCCCCChHHHHHHHHHHHHHHHHHHHhh--cchHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHH
Q 019428          173 DSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLL--TGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLS  250 (341)
Q Consensus       173 ~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~g~~~~~~~~~~~~~~~~~~l~l~~~~~~l~~~~~~~  250 (341)
                      +|++.++|||+.++++ .++.++++|++.++.++.++....  +||..+..++...+|..+..+++.++++++++.+.+.
T Consensus       166 ~a~~~~~qe~~~~~~~-~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g~~~i~~  244 (303)
T PF08449_consen  166 DAFTGVYQEKLFKKYG-KSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALGQFFIFY  244 (303)
T ss_pred             HHHHHHHHHHHHHHhC-CcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999998875 467999999999999998877666  7888777777777888888888888999999999999


Q ss_pred             HHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhccCCCC
Q 019428          251 LIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADDK  308 (341)
Q Consensus       251 ~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~~k~~~  308 (341)
                      +++++||++.++++++|+++++++|+++|||++++.+|+|+++++.|..+|++.|+|+
T Consensus       245 ~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~  302 (303)
T PF08449_consen  245 LIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK  302 (303)
T ss_pred             HHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence            9999999999999999999999999999999999999999999999999999988765

; GO: 0055085 transmembrane transport

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=100.00  E-value=4.3e-36  Score=257.99  Aligned_cols=292  Identities=25%  Similarity=0.405  Sum_probs=250.3

Q ss_pred             ccccccccccCCCCCchhHHHHHHHHHHHHHHHhhc-----------------cCChhHHHHHHHHHHHHHHHHH-hcCC
Q 019428            6 GLCLGFLSQIDPNGNNFSFALLGSSLVISSMASARL-----------------QFSYGWYFTFIQGFVYLVLIYL-QGFT   67 (341)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-----------------~F~~~~~lt~~q~~~~~~~~~~-~~~~   67 (341)
                      |++-+|++      +.-++.+|..++|.++..|...                 .|.|...|.++|+.+..++... ...|
T Consensus         2 ~~~~s~lp------er~rf~ica~GifvCYF~yGI~QEkitrGkYg~~g~~~E~FTfalaLVf~qC~~N~vfAkvl~~ir   75 (337)
T KOG1580|consen    2 GEVRSWLP------ERGRFLICAGGIFVCYFVYGIQQEKITRGKYGLPGESIEKFTFALALVFFQCTANTVFAKVLFLIR   75 (337)
T ss_pred             Cccccccc------cccceeEEecchhheehhhhhHHHHhhccccCCCCcchheehHHHHHHHHHHHHHHHHHHhheeec
Confidence            34455654      3457888999999998776543                 2778889999999998776542 2233


Q ss_pred             CC--CCCchhHHHHHHHHHHHhhHHHHHHhhcCCchhHHHHHhhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHH
Q 019428           68 TK--QMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLI  145 (341)
Q Consensus        68 ~~--~~~~~~~~~~~~~~~~~~~~~l~~~sl~~is~~~~~l~ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~  145 (341)
                      ++  ..+.|-+.|...++.|.++++.+|.++||+++|++.+-|||+|+++|+++.++  .||+++|++++++++++.|++
T Consensus        76 ~~~~~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~--~~KsY~w~kY~cVL~IV~GVa  153 (337)
T KOG1580|consen   76 KKTEIDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLF--AHKSYHWRKYCCVLMIVVGVA  153 (337)
T ss_pred             ccccccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhh--hcccccHHHHHHHHHHHHHHH
Confidence            32  23567888999999999999999999999999999999999999999999999  899999999999999999999


Q ss_pred             HHhccCCCCC---CCchHHHHHHHHHHHHHHHhHHHHHHHHhhhCCCCChHHHHHHHHHHHHHHHHHHHhhcchHHHHHH
Q 019428          146 LFTLADAQTS---PNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWN  222 (341)
Q Consensus       146 l~~~~~~~~~---~~~~~~G~~l~l~a~~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~  222 (341)
                      ++.+.+....   ......|-++.++|.-++++....|+++.+.+++ +.-+|++|+|+++..++...++.+||+++...
T Consensus       154 lFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~-~g~~MM~~~NlwStL~Lg~g~lfTGElweF~y  232 (337)
T KOG1580|consen  154 LFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQR-TGTSMMFYTNLWSTLYLGAGLLFTGELWEFFY  232 (337)
T ss_pred             HhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhcc-CchhhHHHHHHHHHHHhhhhheehhhHHHHHH
Confidence            9999876432   2345789999999999999999999998776653 45689999999999988877888999999888


Q ss_pred             HHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHh
Q 019428          223 SCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKL  302 (341)
Q Consensus       223 ~~~~~~~~~~~l~l~~~~~~l~~~~~~~~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~  302 (341)
                      +...||.+|..+.+.++++++++.+.|..+..+||++.+++.+.|+.+++++|+++|++|++.+||+|..+++.|...-.
T Consensus       233 F~~RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~  312 (337)
T KOG1580|consen  233 FVQRHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADV  312 (337)
T ss_pred             HHHhccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHh
Confidence            88889998888888889999999999999999999999999999999999999999999999999999999999998776


Q ss_pred             ccCC
Q 019428          303 LPAD  306 (341)
Q Consensus       303 ~~k~  306 (341)
                      ...+
T Consensus       313 ~~GK  316 (337)
T KOG1580|consen  313 VDGK  316 (337)
T ss_pred             hcCC
Confidence            5443

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=100.00  E-value=2.9e-34  Score=255.83  Aligned_cols=285  Identities=26%  Similarity=0.421  Sum_probs=253.6

Q ss_pred             chhHHHHHHHHHHHHHHHhhc--------------cCChhHHHHHHHHHHHHHHHHH--hcCCC-CCCCchhHHHHHHHH
Q 019428           21 NFSFALLGSSLVISSMASARL--------------QFSYGWYFTFIQGFVYLVLIYL--QGFTT-KQMMNPWKTYVKLSA   83 (341)
Q Consensus        21 ~~~~~~~~~~~~~~~~i~~~~--------------~F~~~~~lt~~q~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~   83 (341)
                      -...++|-+|++.....+..+              +|+++.++.++|.++..++++.  ++... .+.+.||+.|..+++
T Consensus        12 ~~~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~~~~~apl~~y~~is~   91 (327)
T KOG1581|consen   12 IILLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKWWKKELSGVAPLYKYSLISF   91 (327)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhcccccCCCCCchhHHhHHHH
Confidence            457888999998887666544              3889999999999998877653  33332 345789999999999


Q ss_pred             HHHhhHHHHHHhhcCCchhHHHHHhhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHHhccCCCCC-----CCc
Q 019428           84 VLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTS-----PNF  158 (341)
Q Consensus        84 ~~~~~~~l~~~sl~~is~~~~~l~ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~~~~~~~~-----~~~  158 (341)
                      .+..+..+++.||+|+|+|++++.|+|+.++||+++.++  +|+|++.++++...++..|+.++...+.+.+     ..+
T Consensus        92 tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lv--y~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~n  169 (327)
T KOG1581|consen   92 TNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLV--YGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGREN  169 (327)
T ss_pred             HhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHH--hcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCC
Confidence            999999999999999999999999999999999999999  9999999999999999999999988754331     246


Q ss_pred             hHHHHHHHHHHHHHHHhHHHHHHHHhhhCCCCChHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHHHHHH
Q 019428          159 SMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEA  238 (341)
Q Consensus       159 ~~~G~~l~l~a~~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~l~l~~  238 (341)
                      .+.|+.++..+.++||+.+..|+++.+++ +.+++++++++|+++++.....++..|.+.++.++...||+++..+++.+
T Consensus       170 s~~G~~Ll~~~L~fDgfTn~tQd~lf~~~-k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s  248 (327)
T KOG1581|consen  170 SPIGILLLFGYLLFDGFTNATQDSLFKKY-KVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYS  248 (327)
T ss_pred             chHhHHHHHHHHHHHhhHHhHHHHHhccC-CccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHH
Confidence            89999999999999999999999999854 47889999999999998887777778888888888888999998888889


Q ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhccCCCC
Q 019428          239 MATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADDK  308 (341)
Q Consensus       239 ~~~~l~~~~~~~~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~~k~~~  308 (341)
                      .+++++|.+.|+.+++.||++.+++.++|+++++++|.++||++++..|+.|..+++.|+.+-.+.|.++
T Consensus       249 ~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~~  318 (327)
T KOG1581|consen  249 TCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKKK  318 (327)
T ss_pred             HhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999999999999999999999999999999988877663

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=100.00  E-value=3e-31  Score=247.80  Aligned_cols=279  Identities=18%  Similarity=0.191  Sum_probs=210.0

Q ss_pred             HHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHh---cCCCC--CCCchhHHHHHHHHHHHhhHHHHHHhhcC
Q 019428           24 FALLGSSLVISSMASARLQFSYGWYFTFIQGFVYLVLIYLQ---GFTTK--QMMNPWKTYVKLSAVLMGSHGLTKGSLAF   98 (341)
Q Consensus        24 ~~~~~~~~~~~~~i~~~~~F~~~~~lt~~q~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~sl~~   98 (341)
                      |..++.+....|+.--. .|++|+++++.|+.+..+...+.   +.+++  ..+.+++.+++.|++++.+..++|.|++|
T Consensus        10 w~~~~~~~~~~NK~~l~-~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~   88 (302)
T TIGR00817        10 WYFLNVYFNIYNKKLLN-VFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHVTSNVSLSK   88 (302)
T ss_pred             HHHHHHHHHHHHHHHHh-hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            44445554444442111 48999999999988866543321   22221  12346788889999999999999999999


Q ss_pred             CchhHHHHHhhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHHhccCCCCCCCchHHHHHHHHHHHHHHHhHHH
Q 019428           99 LNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGN  178 (341)
Q Consensus        99 is~~~~~l~ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~~G~~l~l~a~~~~al~~v  178 (341)
                      ++++++++++++.|++++++++++  +|||++++++++++++++|+++....+    .+++..|++++++|+++++++.+
T Consensus        89 ~s~s~~~li~~~~Pv~~~ll~~~~--~~e~~~~~~~~~l~l~~~Gv~l~~~~~----~~~~~~G~~~~l~a~~~~a~~~v  162 (302)
T TIGR00817        89 VAVSFTHTIKAMEPFFSVVLSAFF--LGQEFPSTLWLSLLPIVGGVALASDTE----LSFNWAGFLSAMISNITFVSRNI  162 (302)
T ss_pred             ccHHHHHHHHhcchHHHHHHHHHH--hCCCCcHHHHHHHHHHHHHHhhhcCCc----ccccHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999  999999999999999999998875433    23567899999999999999999


Q ss_pred             HHHHHhhhCCCCChHHHHHHHHHHHHHHHHHHHhhcchHHHHH-HHHh----hch-HHHHHHHHHH-HHHHHHHHHHHHH
Q 019428          179 LQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAW-NSCS----QHL-YVYGVLVFEA-MATFIGQVSVLSL  251 (341)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~-~~~~----~~~-~~~~~l~l~~-~~~~l~~~~~~~~  251 (341)
                      +.||..++. +.++.+.+.|+...+.+.++|.....++..... +...    ... ..+...+..+ .+....+..++.+
T Consensus       163 ~~k~~~~~~-~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (302)
T TIGR00817       163 FSKKAMTIK-SLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFML  241 (302)
T ss_pred             HHHHhhccC-CCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999876632 246788889999888888877655433211111 1100    011 1222122222 2333445677889


Q ss_pred             HHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhccCCCCcc
Q 019428          252 IALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADDKPI  310 (341)
Q Consensus       252 i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~~k~~~~~  310 (341)
                      ++++||+++++.+++||++++++|++++||++|+.+++|.++++.|+.+|++.|.|+++
T Consensus       242 l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~~~~  300 (302)
T TIGR00817       242 LGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQKPK  300 (302)
T ss_pred             HccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhccCcC
Confidence            99999999999999999999999999999999999999999999999999987655443

specificities overlap.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=100.00  E-value=2.4e-30  Score=246.17  Aligned_cols=278  Identities=15%  Similarity=0.193  Sum_probs=208.9

Q ss_pred             hhHHHHHHHHHHHHH---HHhhc---cCChhHHHHHHHHHHHHHHHH---HhcCCCCC----CCchhHHHHHHHHHHHhh
Q 019428           22 FSFALLGSSLVISSM---ASARL---QFSYGWYFTFIQGFVYLVLIY---LQGFTTKQ----MMNPWKTYVKLSAVLMGS   88 (341)
Q Consensus        22 ~~~~~~~~~~~~~~~---i~~~~---~F~~~~~lt~~q~~~~~~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~~~   88 (341)
                      .+....+..++..+.   ++||+   .||||++++++|+++.+++..   ..++++++    .+.+++..+++|+++...
T Consensus        48 ~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~~~  127 (350)
T PTZ00343         48 WKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHLFV  127 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            445555555555553   45554   589999999999998754332   12333221    123567888999998777


Q ss_pred             HHHHHHhhcCCchhHHHHHhhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHHhccCCCCCCCchHHHHHHHHH
Q 019428           89 HGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISG  168 (341)
Q Consensus        89 ~~l~~~sl~~is~~~~~l~ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~~G~~l~l~  168 (341)
                      ....+.|++++++++++++|++.|++++++++++  +|||++++++++++++++|+++.+.+|.    ++++.|++++++
T Consensus       128 ~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~--l~ek~s~~~~l~l~l~v~Gv~l~~~~~~----~~~~~G~~~~l~  201 (350)
T PTZ00343        128 HFGAVISMGLGAVSFTHVVKAAEPVFTALLSILF--LKQFLNLYAYLSLIPIVGGVALASVKEL----HFTWLAFWCAML  201 (350)
T ss_pred             HHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHH--hCCCccHHHHHHHHHHHHHHHheecccc----hhHHHHHHHHHH
Confidence            7778999999999999999999999999999999  9999999999999999999999886543    457889999999


Q ss_pred             HHHHHHhHHHHHHHHhhhCC----CCChHHHHHHHHHHHHHHHHHHHh-hcchH-HHHHHHH--h--hch--HHHHHHHH
Q 019428          169 ALIMDSFLGNLQEAIFTMNP----ETTQMEMLFCSTVVGLPMLIPPML-LTGEL-FKAWNSC--S--QHL--YVYGVLVF  236 (341)
Q Consensus       169 a~~~~al~~v~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~-~~~~~~~--~--~~~--~~~~~l~l  236 (341)
                      |++++|+++++.|+.+++.+    +.++.+...+..+++.++++|... .++.. ...+...  .  ...  ..+..++.
T Consensus       202 s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~  281 (350)
T PTZ00343        202 SNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFF  281 (350)
T ss_pred             HHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHH
Confidence            99999999999999876542    234555566667788888777644 32211 1111000  0  000  11122333


Q ss_pred             HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhccC
Q 019428          237 EAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPA  305 (341)
Q Consensus       237 ~~~~~~l~~~~~~~~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~~k  305 (341)
                      +++..++.+.+.|.+++++||+++++.+++||++++++|++++||++|+.+++|.++++.|+++|++.|
T Consensus       282 s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~k  350 (350)
T PTZ00343        282 SGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLFK  350 (350)
T ss_pred             HHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhcC
Confidence            334444444555689999999999999999999999999999999999999999999999999999764

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.98  E-value=3.7e-33  Score=257.15  Aligned_cols=268  Identities=18%  Similarity=0.290  Sum_probs=221.0

Q ss_pred             HHhhccCChhHHHHHHHHHHHHHHHHH-h--cCCC---CCCCchhHHHHHHHHHHHhhHHHHHHhhcCCchhHHHHHhhc
Q 019428           37 ASARLQFSYGWYFTFIQGFVYLVLIYL-Q--GFTT---KQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKST  110 (341)
Q Consensus        37 i~~~~~F~~~~~lt~~q~~~~~~~~~~-~--~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~sl~~is~~~~~l~ks~  110 (341)
                      ++++++|+||+++|.+|..+..+.... +  +..+   .+++.+++..+++|+.++++.+++|.|++|++++++|++|++
T Consensus        39 il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~  118 (316)
T KOG1441|consen   39 ILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVFCISHVLGNVSLSYVPVSFYQTIKAL  118 (316)
T ss_pred             hhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHHHHHHHhcchhhhccchhHHHHHHhh
Confidence            555568999999999998886654332 2  2222   124578999999999999999999999999999999999999


Q ss_pred             chHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHHhccCCCCCCCchHHHHHHHHHHHHHHHhHHHHHHHHhhh-CCC
Q 019428          111 KVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGNLQEAIFTM-NPE  189 (341)
Q Consensus       111 ~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~~G~~l~l~a~~~~al~~v~~~~~~~~-~~~  189 (341)
                      +|+++.++++++  .+|++++..++++++++.|+++.+.+|.    ++++.|++.++++.+..++++++.++++++ ..+
T Consensus       119 ~P~~tvl~~~~~--~~~~~s~~~~lsL~piv~GV~ias~~e~----~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~  192 (316)
T KOG1441|consen  119 MPPFTVLLSVLL--LGKTYSSMTYLSLLPIVFGVAIASVTEL----SFNLFGFISAMISNLAFALRNILSKKLLTSKGES  192 (316)
T ss_pred             cchhHHHHHHHH--hCCCCcceEEEEEEEeeeeEEEeeeccc----cccHHHHHHHHHHHHHHHHHHHHHHHhhhccccc
Confidence            999999999999  8999999999999999999999998774    579999999999999999999999998863 345


Q ss_pred             CChHHHHHHHHHHHHHHHH-HHHh-hcchHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 019428          190 TTQMEMLFCSTVVGLPMLI-PPML-LTGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTAR  267 (341)
Q Consensus       190 ~~~~~~~~~~~~~~~~~l~-~~~~-~~g~~~~~~~~~~~~~~~~~~l~l~~~~~~l~~~~~~~~i~~~sa~t~si~~~l~  267 (341)
                      .++++++.|.+++++..++ |... .+|+....+.....+-..+. .++..++.+..|...|.+++++||+|.++.+++|
T Consensus       193 ~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~-~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K  271 (316)
T KOG1441|consen  193 LNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLI-LLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMK  271 (316)
T ss_pred             cCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHH-HHHHHHHHHHHHHHHHHHHcccCchhhhhhccce
Confidence            7889999999999988888 6433 23332100000000111222 3334488788899999999999999999999999


Q ss_pred             HHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhccCCCCccc
Q 019428          268 KAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADDKPIK  311 (341)
Q Consensus       268 ~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~~k~~~~~~  311 (341)
                      +++.+..|+++|+||+|+.|.+|+++.+.|+.+|++.|.+++++
T Consensus       272 ~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~~  315 (316)
T KOG1441|consen  272 RIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKKG  315 (316)
T ss_pred             EEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhcc
Confidence            99999999999999999999999999999999999999876654

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.96  E-value=2e-27  Score=221.84  Aligned_cols=279  Identities=16%  Similarity=0.209  Sum_probs=211.4

Q ss_pred             hhHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHH-HHHHhcCCC------CCCCchhHHHHHHHHHHHhhHHHHHH
Q 019428           22 FSFALLGSSLVISSMASARLQFSYGWYFTFIQGFVYLV-LIYLQGFTT------KQMMNPWKTYVKLSAVLMGSHGLTKG   94 (341)
Q Consensus        22 ~~~~~~~~~~~~~~~i~~~~~F~~~~~lt~~q~~~~~~-~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~l~~~   94 (341)
                      +++.+++++++... +-++ +++.|.+-++...+.-.+ ......+|+      +..+.+|++|+.++++...++.+.+.
T Consensus        21 lsl~~~~t~~~s~~-l~~~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~   98 (334)
T PF06027_consen   21 LSLCITGTGTFSSL-LANK-GVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVL   98 (334)
T ss_pred             HHHHHHhHHHHHHH-HHhc-CccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence            34555555555553 3333 788888877776544222 111111221      12357899999999999999999999


Q ss_pred             hhcCCchhHHHHHhhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHHhccCCCC-----CCCchHHHHHHHHHH
Q 019428           95 SLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQT-----SPNFSMIGVIMISGA  169 (341)
Q Consensus        95 sl~~is~~~~~l~ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~~~~~~~-----~~~~~~~G~~l~l~a  169 (341)
                      |++|++++..+++.++..++++++++++  +|+|+++.|+++++++++|++++...|...     ++++...|++++++|
T Consensus        99 a~~yTsvtS~~lL~~~~i~~~~~LS~~f--L~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~  176 (334)
T PF06027_consen   99 AYQYTSVTSVQLLDCTSIPFVMILSFIF--LKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLG  176 (334)
T ss_pred             HhhcccHhHHHhhhhhhhHHHHHHHHHH--HHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHH
Confidence            9999999999999999999999999999  999999999999999999999998887543     134679999999999


Q ss_pred             HHHHHhHHHHHHHHhhhCCCCChHHHHHHHHHHHHHHHHHHHh-hcchHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH
Q 019428          170 LIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPML-LTGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSV  248 (341)
Q Consensus       170 ~~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~~~~~~~~~l~l~~~~~~l~~~~~  248 (341)
                      ++++|++++.+|+..++.   +..+.+....+++.++..+... ++.+  + +.....++..+..++...++.+..+...
T Consensus       177 a~lya~~nV~~E~~v~~~---~~~~~lg~~Glfg~ii~~iq~~ile~~--~-i~~~~w~~~~~~~~v~~~~~lf~~y~l~  250 (334)
T PF06027_consen  177 AILYAVSNVLEEKLVKKA---PRVEFLGMLGLFGFIISGIQLAILERS--G-IESIHWTSQVIGLLVGYALCLFLFYSLV  250 (334)
T ss_pred             HHHHHHHHHHHHHhcccC---CHHHHHHHHHHHHHHHHHHHHHheehh--h-hhccCCChhhHHHHHHHHHHHHHHHHHH
Confidence            999999999999987764   4566666666666666554322 2221  1 1111123334444444455556666777


Q ss_pred             HHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhccCCCCcc
Q 019428          249 LSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADDKPI  310 (341)
Q Consensus       249 ~~~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~~k~~~~~  310 (341)
                      ...++..||+..++...+-++.++++++++||+++++..++|.++++.|+++|+..+.+.++
T Consensus       251 p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~~~  312 (334)
T PF06027_consen  251 PIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPEEE  312 (334)
T ss_pred             HHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCcccc
Confidence            88999999999999999999999999999999999999999999999999999987655443

Some of the sequences in this family are annotated as putative membrane proteins.

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.96  E-value=6.8e-27  Score=211.35  Aligned_cols=289  Identities=17%  Similarity=0.232  Sum_probs=233.9

Q ss_pred             CCCCchhHHHHHHHHHHHHH-HHhhccCChhHHHHHHHHHHHHHHHH-HhcCC--C-C-CCCchhHHHHHHHHHHHhhHH
Q 019428           17 PNGNNFSFALLGSSLVISSM-ASARLQFSYGWYFTFIQGFVYLVLIY-LQGFT--T-K-QMMNPWKTYVKLSAVLMGSHG   90 (341)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~-i~~~~~F~~~~~lt~~q~~~~~~~~~-~~~~~--~-~-~~~~~~~~~~~~~~~~~~~~~   90 (341)
                      |-.++..|.++|......|+ +.+.++||-..++...|.+++++... ++..+  . + -.+...|+|+|+++++.++..
T Consensus        13 ~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~   92 (314)
T KOG1444|consen   13 PLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLF   92 (314)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHH
Confidence            33456677777777777776 56767777777888899998775443 33222  1 1 123456889999999999999


Q ss_pred             HHHHhhcCCchhHHHHHhhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHHhccCCCCCCCchHHHHHHHHHHH
Q 019428           91 LTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGAL  170 (341)
Q Consensus        91 l~~~sl~~is~~~~~l~ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~~G~~l~l~a~  170 (341)
                      .+..+++|+++|+++++|..+|+.+++.+.++  +|+|+++..+.++..+.+|.......|.    +++..|+.+++.++
T Consensus        93 t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf--~~~~~~~~v~~Sv~~m~~~s~~~~~~d~----sf~~~gY~w~~~n~  166 (314)
T KOG1444|consen   93 TGSKSLKYLNVPMFTVFKNLTIILTAIGEVLF--FGKRPSNKVWASVFAMIIGSVAAAFTDL----SFNLRGYSWALANC  166 (314)
T ss_pred             HccccccccCchHHHHHhhchHHHHHHhHHhh--cCcCchhhHHHHHHHHHHHHHhhccccc----eecchhHHHHHHHH
Confidence            99999999999999999999999999999999  8999999999999999999999888775    46778999999999


Q ss_pred             HHHHhHHHHHHHHhhhCCCCChHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHH---hhchHHHHHHHHHHHHHHHHHHH
Q 019428          171 IMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSC---SQHLYVYGVLVFEAMATFIGQVS  247 (341)
Q Consensus       171 ~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~---~~~~~~~~~l~l~~~~~~l~~~~  247 (341)
                      +..+.+.++.|+..+.. +.+.+++++|.++.++|.+....+.+||.. ...+.   ...+.++..+.++|++++.-+++
T Consensus       167 ~~~a~~~v~~kk~vd~~-~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~-~l~~~~~~~~~~~~~~~~~lScv~gf~isy~  244 (314)
T KOG1444|consen  167 LTTAAFVVYVKKSVDSA-NLNKFGLVFYNNLLSLPPLLILSFITGELD-ALSLNFDNWSDSSVLVVMLLSCVMGFGISYT  244 (314)
T ss_pred             HHHHHHHHHHHHhhccc-cccceeEEeehhHHHHHHHHHHHHHhcchH-HHHhhcccccchhHHHHHHHHHHHHHHHHHH
Confidence            99999999998876543 345688999999999998877777888865 33322   12345677788999999999999


Q ss_pred             HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhccCCCCccccc
Q 019428          248 VLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADDKPIKRT  313 (341)
Q Consensus       248 ~~~~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~~k~~~~~~~~  313 (341)
                      .+++.+..||++.+++|......+.+.+++++|+++++.+.+|+.+.+.|-.+|++.+.|+++.++
T Consensus       245 s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~~~~  310 (314)
T KOG1444|consen  245 SFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKKQPP  310 (314)
T ss_pred             HHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhccCCC
Confidence            999999999999999995555555555555666899999999999999999999999877665544

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.95  E-value=1.6e-27  Score=212.61  Aligned_cols=288  Identities=19%  Similarity=0.281  Sum_probs=217.6

Q ss_pred             ccCChhHHHHHHHHHHHHHHHHH-----hcCCCC-CCCchhHHHH----HHHHHHHhhHHHHHHhhcCCchhHHHHHhhc
Q 019428           41 LQFSYGWYFTFIQGFVYLVLIYL-----QGFTTK-QMMNPWKTYV----KLSAVLMGSHGLTKGSLAFLNYPAQLMFKST  110 (341)
Q Consensus        41 ~~F~~~~~lt~~q~~~~~~~~~~-----~~~~~~-~~~~~~~~~~----~~~~~~~~~~~l~~~sl~~is~~~~~l~ks~  110 (341)
                      .+|+||.+++.+|+++-..++..     +...++ +.+..|++++    |.++.-+.++.++|+|++|++++.|++.||+
T Consensus        40 ~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSS  119 (349)
T KOG1443|consen   40 KNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSS  119 (349)
T ss_pred             cCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeecccc
Confidence            37999999999999885544322     122222 2345677776    8899999999999999999999999999999


Q ss_pred             chHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHHhccCCCCCCCchHHHHHHHHHHHHHHHhHHHHHHHHhhhCC--
Q 019428          111 KVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNP--  188 (341)
Q Consensus       111 ~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~~G~~l~l~a~~~~al~~v~~~~~~~~~~--  188 (341)
                      +++|+.+++.+++  -||+++.-.+.++++..|++++++.+.    +++..|+.++++|+++.|+++.+.|.++++++  
T Consensus       120 si~FIllFs~if~--lEk~~w~L~l~v~lI~~Glflft~KsT----qf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~  193 (349)
T KOG1443|consen  120 SILFILLFSLIFK--LEKFRWALVLIVLLIAVGLFLFTYKST----QFNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSA  193 (349)
T ss_pred             HHHHHHHHHHHHH--hHHHHHHHHHHHHHHhhheeEEEeccc----ceeehhHHHHHHHHHhhhhhHHHHHHHHhcCccc
Confidence            9999999999994  499999999999999999999998763    58999999999999999999999999888763  


Q ss_pred             CCChHHHHHHHHHHHHHHHHHH-HhhcchHHHHHH--HHhhch-HH---HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Q 019428          189 ETTQMEMLFCSTVVGLPMLIPP-MLLTGELFKAWN--SCSQHL-YV---YGVLVFEAMATFIGQVSVLSLIALFGAATTA  261 (341)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~l~~~-~~~~g~~~~~~~--~~~~~~-~~---~~~l~l~~~~~~l~~~~~~~~i~~~sa~t~s  261 (341)
                      +.+|..++++..++....++|. +..+|......+  +...++ ..   ...+.+.+..++..-.+.|..+.++|..+.+
T Consensus       194 ~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~g~laF~l~~sEflLl~~Ts~ltlS  273 (349)
T KOG1443|consen  194 KRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLGGLLAFLLEFSEFLLLSRTSSLTLS  273 (349)
T ss_pred             cCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHheeeeccceeee
Confidence            4578888888888766666664 456664322111  111122 12   2344555555555556779999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhccCCCCcccccccccchhhhhhhcccccccccccc
Q 019428          262 MVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADDKPIKRTATSSFKVNIRKLSFSEREEADEEK  337 (341)
Q Consensus       262 i~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (341)
                      +++..|.+.+++++..+.+|.++..+|+|..+++.|+..|...++.   -|....+++....-.+|+++|..|+||
T Consensus       274 IaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~~~~~---~~~~~~~p~~~~~~~~~~t~~~~~~e~  346 (349)
T KOG1443|consen  274 IAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRNEPQN---FKRKPSSPIVPVSIRSDLTNEMIAQED  346 (349)
T ss_pred             HHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhccCccc---cccCCCCCccceecCcchhhhhhhccc
Confidence            9999999999999999999999999999999999999999443211   112233444444444444444444443

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.95  E-value=3.9e-28  Score=213.59  Aligned_cols=281  Identities=23%  Similarity=0.365  Sum_probs=229.4

Q ss_pred             hhHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHH--HhcCCCCCCCchhHHHHHHHHHHHhhHHHHHHhhcC-
Q 019428           22 FSFALLGSSLVISSMASARLQFSYGWYFTFIQGFVYLVLIY--LQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAF-   98 (341)
Q Consensus        22 ~~~~~~~~~~~~~~~i~~~~~F~~~~~lt~~q~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sl~~-   98 (341)
                      ..+.-||+++..++.+-.. .-..+..+|+.|++..+.-+.  -.++...+++.|.|+|+..-..++...+++|+++++ 
T Consensus        10 ~vf~GCcsnvv~lE~L~~~-~pgsgNLITFaqFlFia~eGlif~skf~~~k~kiplk~Y~i~V~mFF~vnv~NN~al~f~   88 (330)
T KOG1583|consen   10 LVFGGCCSNVVFLELLVRN-EPGSGNLITFAQFLFIATEGLIFTSKFFTVKPKIPLKDYAITVAMFFIVNVTNNYALKFN   88 (330)
T ss_pred             HHHHhhhchHHHHHHHHHh-CCCCeeehHHHHHHHHHHhceeeeccccccCCCCchhhhheehheeeeeeeeccceeeec
Confidence            4677899999888876443 345678999999775433222  234544567899999999888888999999999999 


Q ss_pred             CchhHHHHHhhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHHhccCCCCC---------C----C--chHHHH
Q 019428           99 LNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTS---------P----N--FSMIGV  163 (341)
Q Consensus        99 is~~~~~l~ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~~~~~~~~---------~----~--~~~~G~  163 (341)
                      ++.|.+.++|+.+++.+|++++++  .+||++.+|+.+++++.+|+++++.......         .    +  ....|+
T Consensus        89 I~~PlHiIfRsgsll~nM~~g~il--~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi  166 (330)
T KOG1583|consen   89 IPMPLHIIFRSGSLLANMILGWIL--LGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGI  166 (330)
T ss_pred             ccceEEEEEecCcHHHHHHHHHHh--ccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHH
Confidence            999999999999999999999999  8999999999999999999999876432210         0    1  136899


Q ss_pred             HHHHHHHHHHHhHHHHHHHHhhhCCCCChHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhc------------hHHH
Q 019428          164 IMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQH------------LYVY  231 (341)
Q Consensus       164 ~l~l~a~~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~------------~~~~  231 (341)
                      .+...|.+.+|...++||+..+|+++ ++-|.+||++..++|.++.   ..+++.+.+.....+            |..|
T Consensus       167 ~lL~~al~~sa~mgiyqE~~Y~kyGK-h~~EalFytH~LsLP~Flf---~~~div~~~~~~~~se~~~~p~~g~~vP~~~  242 (330)
T KOG1583|consen  167 ALLVFALLLSAYMGIYQETTYQKYGK-HWKEALFYTHFLSLPLFLF---MGDDIVSHWRLAFKSESYLIPLLGFKVPSMW  242 (330)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcC-ChHHHHHHHHHhccchHHH---hcchHHHHHHHHhcCcceeccccCccccHHH
Confidence            99999999999999999999999986 4789999999999987653   345555444433222            3457


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhccCCCCc
Q 019428          232 GVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADDKP  309 (341)
Q Consensus       232 ~~l~l~~~~~~l~~~~~~~~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~~k~~~~  309 (341)
                      .+++.+++.+..+.-..+.+-.+++++|.+++-++|+.+++++|+++|++|+|+.+|+|.++++.|.++|+....+++
T Consensus       243 ~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~~~~~~  320 (330)
T KOG1583|consen  243 VYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANVWNHPK  320 (330)
T ss_pred             HHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHHHcCcc
Confidence            777778888877777788999999999999999999999999999999999999999999999999999987655544

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.94  E-value=4.1e-24  Score=203.11  Aligned_cols=282  Identities=11%  Similarity=0.057  Sum_probs=189.5

Q ss_pred             chhHHHHHHHHHHHHHHHhhccCC---hhHHHHHHHHHHHHHHHH-H---hcCCCCCCCchhH---HHHHHHHHHHhhHH
Q 019428           21 NFSFALLGSSLVISSMASARLQFS---YGWYFTFIQGFVYLVLIY-L---QGFTTKQMMNPWK---TYVKLSAVLMGSHG   90 (341)
Q Consensus        21 ~~~~~~~~~~~~~~~~i~~~~~F~---~~~~lt~~q~~~~~~~~~-~---~~~~~~~~~~~~~---~~~~~~~~~~~~~~   90 (341)
                      .+.-++.+=..+..+.++.|...+   .|..+.+.++....++.. +   ++.+++.++.+++   .+..++++.+....
T Consensus        14 ~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~~~~~   93 (358)
T PLN00411         14 FLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGSMYVI   93 (358)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHHHHH
Confidence            444444444444444444443211   234567788777554322 1   2111111222343   44455555544556


Q ss_pred             HHHHhhcCCchhHHHHHhhcchHHHHHHHHhhccc------ccccChhHHHHHHHHHHHHHHHhccCCCC----------
Q 019428           91 LTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGL------RRKYPAHEYVSALLLVVGLILFTLADAQT----------  154 (341)
Q Consensus        91 l~~~sl~~is~~~~~l~ks~~pv~v~ll~~l~~~~------~~k~s~~~~~~l~l~~~Gv~l~~~~~~~~----------  154 (341)
                      +.+.+++|++.+.+.++.++.|++++++++++  +      |||.++++++++++.++|+.+....+...          
T Consensus        94 ~~~~gl~~tsa~~asll~~~~P~~~~lla~~~--~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~  171 (358)
T PLN00411         94 TGYIGIEYSNPTLASAISNITPALTFILAIIF--RMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYL  171 (358)
T ss_pred             HHHHHHhhccHHHHHHHHHhhHHHHHHHHHHH--HhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccccc
Confidence            88999999999999999999999999999998  4      89999999999999999999876532110          


Q ss_pred             ----------C-CCchHHHHHHHHHHHHHHHhHHHHHHHHhhhCCCCChHHHHHHHHHH-HHHHHHHHHhhcchHHHHHH
Q 019428          155 ----------S-PNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVV-GLPMLIPPMLLTGELFKAWN  222 (341)
Q Consensus       155 ----------~-~~~~~~G~~l~l~a~~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~g~~~~~~~  222 (341)
                                . ......|++++++|++++|++++.+++..+++++  .....++...+ +.+...+....+++-...+.
T Consensus       172 ~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~--~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~  249 (358)
T PLN00411        172 NFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPA--AFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWI  249 (358)
T ss_pred             cccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc--HhHHHHHHHHHHHHHHHHHHHHHccCCcccce
Confidence                      0 1112569999999999999999999998777642  23334444333 33333333332221011110


Q ss_pred             HHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHh
Q 019428          223 SCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKL  302 (341)
Q Consensus       223 ~~~~~~~~~~~l~l~~~~~~l~~~~~~~~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~  302 (341)
                       ...+...+..++ .++.+.+++.+|++++++.||..+++..+++|++++++|++++||++++.+++|.++++.|+++..
T Consensus       250 -~~~~~~~~~i~y-~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~  327 (358)
T PLN00411        250 -IHFDITLITIVT-MAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVM  327 (358)
T ss_pred             -eccchHHHHHHH-HHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence             011222233333 334456788999999999999999999999999999999999999999999999999999999988


Q ss_pred             ccCCCC
Q 019428          303 LPADDK  308 (341)
Q Consensus       303 ~~k~~~  308 (341)
                      +.++++
T Consensus       328 ~~~~~~  333 (358)
T PLN00411        328 WGKANE  333 (358)
T ss_pred             hhhhhh
Confidence            655443

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.92  E-value=1.4e-22  Score=188.72  Aligned_cols=275  Identities=13%  Similarity=-0.025  Sum_probs=192.5

Q ss_pred             CCCchhHHHHHHHHHHHHHHHhhcc--CChhHHHHHHHHHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHhhHHHHHHh
Q 019428           18 NGNNFSFALLGSSLVISSMASARLQ--FSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGS   95 (341)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~i~~~~~--F~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s   95 (341)
                      +...+.+++....+++.+....|..  .--|..+.+.++....++......+++.++.+++..+.-++.++....+.+.+
T Consensus         2 ~~~~~l~~l~a~~~Wg~~~~~~k~~~~~~~P~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~a   81 (295)
T PRK11689          2 SQKATLIGLIAILLWSTMVGLIRGVSESLGPVGGAAMIYSVSGLLLLLTVGFPRLRQFPKRYLLAGGLLFVSYEICLALS   81 (295)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHhHHHHHHHHHHHHH
Confidence            4455667777778888877666642  22478888999777654433221122212223333333344456666777777


Q ss_pred             hcC----CchhHHHHHhhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHHhccCCCCC-------CCchHHHHH
Q 019428           96 LAF----LNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTS-------PNFSMIGVI  164 (341)
Q Consensus        96 l~~----is~~~~~l~ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~~~~~~~~-------~~~~~~G~~  164 (341)
                      ++|    ++.....++.++.|++++++++++  +|||+++++++++++.++|++++...+...+       ...+..|++
T Consensus        82 ~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~--~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~  159 (295)
T PRK11689         82 LGYANTRRQAIEVGMVNYLWPSLTILFAVLF--NGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYG  159 (295)
T ss_pred             HHHhhccccchHHHHHHHHhHHHHHHHHHHH--hcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHH
Confidence            765    466677789999999999999999  8999999999999999999998875542110       013457999


Q ss_pred             HHHHHHHHHHhHHHHHHHHhhhCCCCChHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHHHHHHHHHHHH
Q 019428          165 MISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFIG  244 (341)
Q Consensus       165 l~l~a~~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~l~l~~~~~~l~  244 (341)
                      ++++|++++|.++++.||..++.   ++....+   ..+...+.+....+++..     ...++..|..+++.++.+.++
T Consensus       160 ~~l~aa~~~A~~~v~~k~~~~~~---~~~~~~~---~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~l~~~~~~t~~~  228 (295)
T PRK11689        160 LAFIGAFIWAAYCNVTRKYARGK---NGITLFF---ILTALALWIKYFLSPQPA-----MVFSLPAIIKLLLAAAAMGFG  228 (295)
T ss_pred             HHHHHHHHHHHHHHHHhhccCCC---CchhHHH---HHHHHHHHHHHHHhcCcc-----ccCCHHHHHHHHHHHHHHHHH
Confidence            99999999999999999875443   3333222   112222222222222210     111333444444555778889


Q ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhccC
Q 019428          245 QVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPA  305 (341)
Q Consensus       245 ~~~~~~~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~~k  305 (341)
                      +.++++++++.+|.++++..+++|++++++|++++||++++.+++|.++++.|+.+..+.+
T Consensus       229 ~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~  289 (295)
T PRK11689        229 YAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLAT  289 (295)
T ss_pred             HHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhH
Confidence            9999999999999999999999999999999999999999999999999999998876544

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.92  E-value=7.1e-22  Score=184.37  Aligned_cols=278  Identities=12%  Similarity=0.156  Sum_probs=196.3

Q ss_pred             hHHHHHHHHHHHHHHHhhcc--CChhHHHHHHHHHHHHHHHHHhcCCCCCCCchhHHHHHHHHHH-HhhHHHHHHhhcC-
Q 019428           23 SFALLGSSLVISSMASARLQ--FSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVL-MGSHGLTKGSLAF-   98 (341)
Q Consensus        23 ~~~~~~~~~~~~~~i~~~~~--F~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~sl~~-   98 (341)
                      ..+++...+++.+....|..  --.|..+++.++............+   ++.+++..+..+++. .....+.+.+++| 
T Consensus         7 l~~l~~~~~Wg~~~~~~k~~~~~~~p~~~~~~R~~~a~~~l~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   83 (299)
T PRK11453          7 VLALLVVVVWGLNFVVIKVGLHNMPPLMLAGLRFMLVAFPAIFFVAR---PKVPLNLLLGYGLTISFGQFAFLFCAINFG   83 (299)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhcC---CCCchHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            34566677777777666652  2347888888977644322211111   223455455555543 3455567788888 


Q ss_pred             CchhHHHHHhhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHHhccCCCCCCCchHHHHHHHHHHHHHHHhHHH
Q 019428           99 LNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGN  178 (341)
Q Consensus        99 is~~~~~l~ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~~G~~l~l~a~~~~al~~v  178 (341)
                      ++.+.+.++.++.|++++++++++  +|||+++++++++++.++|+.++...+.+. .+.+..|+.++++++++++.+.+
T Consensus        84 ~~a~~a~~l~~~~pi~~~ll~~~~--l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~-~~~~~~G~~l~l~aal~~a~~~v  160 (299)
T PRK11453         84 MPAGLASLVLQAQAFFTIVLGAFT--FGERLQGKQLAGIALAIFGVLVLIEDSLNG-QHVAMLGFMLTLAAAFSWACGNI  160 (299)
T ss_pred             CCHHHHHHHHHhHHHHHHHHHHHH--hcCcCcHHHHHHHHHHHHhHHHhccccCCC-cchhHHHHHHHHHHHHHHHHHHH
Confidence            688898999999999999999999  999999999999999999999887543221 23346799999999999999999


Q ss_pred             HHHHHhhhCCCCChHHHHHHHHHHHHHHHHHH-HhhcchHHHHHHHHhhchHHH-HHHHHHHHHHHHHHHHHHHHHHHhh
Q 019428          179 LQEAIFTMNPETTQMEMLFCSTVVGLPMLIPP-MLLTGELFKAWNSCSQHLYVY-GVLVFEAMATFIGQVSVLSLIALFG  256 (341)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~g~~~~~~~~~~~~~~~~-~~l~l~~~~~~l~~~~~~~~i~~~s  256 (341)
                      ++||..++.+........++....+....... ...+++..........++..| ..+++..+++.+++.+++.++++.+
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~  240 (299)
T PRK11453        161 FNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYE  240 (299)
T ss_pred             HHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            99987654332222333444444433222221 122232110001111123333 4556667888899999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhccCC
Q 019428          257 AATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPAD  306 (341)
Q Consensus       257 a~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~~k~  306 (341)
                      |.+.+++..++|+++.++|++++||++++.+++|.++++.|+++..+.++
T Consensus       241 a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~  290 (299)
T PRK11453        241 TWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR  290 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence            99999999999999999999999999999999999999999998877664

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.90  E-value=2.4e-21  Score=176.74  Aligned_cols=241  Identities=15%  Similarity=0.124  Sum_probs=183.6

Q ss_pred             ChhHHHHHHHHHHHHHHHH-HhcCCCCCCCchhHHHHHHHHH-HHhhHHHHHHhhcCCchhHHHHHhhcchHHHHHHHHh
Q 019428           44 SYGWYFTFIQGFVYLVLIY-LQGFTTKQMMNPWKTYVKLSAV-LMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAF  121 (341)
Q Consensus        44 ~~~~~lt~~q~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~sl~~is~~~~~l~ks~~pv~v~ll~~l  121 (341)
                      .-+..+.+.+++...++.. ....+  +.+.+++.++..+.+ .+.+..+.+.|++|++.+...++.++.|+++++++.+
T Consensus        16 ~~~~~~~~~r~~~~~l~l~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l   93 (260)
T TIGR00950        16 VPLYFAVFRRLIFALLLLLPLLRRR--PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDL   93 (260)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhc--cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHH
Confidence            4556777777666544322 22222  233455666666654 5788889999999999999999999999999999999


Q ss_pred             hcccccccChhHHHHHHHHHHHHHHHhccCCCCCCCchHHHHHHHHHHHHHHHhHHHHHHHHhhhCCCCChHHHHHHHHH
Q 019428          122 IPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTV  201 (341)
Q Consensus       122 ~~~~~~k~s~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~~G~~l~l~a~~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~  201 (341)
                      +  +|||++++++.+++++++|+.+....+.   .+.+..|+.++++++++++.+.++.|+..++.+ .++.....+...
T Consensus        94 ~--~~e~~~~~~~~gi~i~~~Gv~li~~~~~---~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~-~~~~~~~~~~~~  167 (260)
T TIGR00950        94 M--GKERPRKLVLLAAVLGLAGAVLLLSDGN---LSINPAGLLLGLGSGISFALGTVLYKRLVKKEG-PELLQFTGWVLL  167 (260)
T ss_pred             H--ccCCCcHHHHHHHHHHHHhHHhhccCCc---ccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCC-chHHHHHHHHHH
Confidence            9  8999999999999999999998865432   234678999999999999999999988765432 223334334556


Q ss_pred             HHHHHHHHHHhhcchHHHHHHHHhhchHHH-HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhC
Q 019428          202 VGLPMLIPPMLLTGELFKAWNSCSQHLYVY-GVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFT  280 (341)
Q Consensus       202 ~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~-~~l~l~~~~~~l~~~~~~~~i~~~sa~t~si~~~l~~v~~ills~~~f~  280 (341)
                      ++.+.+.+.....++...      .++..| ..++...+++.+++.++++++++.++.++++...++|+++.+++++++|
T Consensus       168 ~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~  241 (260)
T TIGR00950       168 LGALLLLPFAWFLGPNPQ------ALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILG  241 (260)
T ss_pred             HHHHHHHHHHHhcCCCCC------cchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhC
Confidence            666666655443332111      122223 3455556777889999999999999999999999999999999999999


Q ss_pred             CCcchhhhHHHHHHHHHH
Q 019428          281 KPLTEQHGTGLLLIAMGI  298 (341)
Q Consensus       281 e~~t~~~~iG~~lil~Gv  298 (341)
                      |++++.+++|.++++.|+
T Consensus       242 E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       242 ETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             CCCCHHHHHHHHHHHHhc
Confidence            999999999999999986

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.90  E-value=9.6e-21  Score=176.17  Aligned_cols=268  Identities=13%  Similarity=0.063  Sum_probs=193.4

Q ss_pred             HHHHHHHHHHHHHHhhcc--CChhHHHHHHHHHHHHHHHH--HhcCCC-CCCCchhHHHHHHHHHH-HhhHHHHHHhh-c
Q 019428           25 ALLGSSLVISSMASARLQ--FSYGWYFTFIQGFVYLVLIY--LQGFTT-KQMMNPWKTYVKLSAVL-MGSHGLTKGSL-A   97 (341)
Q Consensus        25 ~~~~~~~~~~~~i~~~~~--F~~~~~lt~~q~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~l~~~sl-~   97 (341)
                      .+....+++.+.+..|..  --.|..+++.+++...++..  ....++ .+.+.+++.....+.+. .....+.+.+. +
T Consensus        13 ~~~~~~iWg~~~~~~K~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   92 (292)
T PRK11272         13 LFALYIIWGSTYLVIRIGVESWPPLMMAGVRFLIAGILLLAFLLLRGHPLPTLRQWLNAALIGLLLLAVGNGMVTVAEHQ   92 (292)
T ss_pred             HHHHHHHHhhHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            344444555566666653  23678888999887654322  221111 12233455566666654 45667778888 9


Q ss_pred             CCchhHHHHHhhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHHhccCCCCCCCchHHHHHHHHHHHHHHHhHH
Q 019428           98 FLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLG  177 (341)
Q Consensus        98 ~is~~~~~l~ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~~G~~l~l~a~~~~al~~  177 (341)
                      +++.+..+++.++.|+++++++. +  +|||+++++++++++.++|+.+...++.   .+.+..|+++.+++++++|.+.
T Consensus        93 ~~~a~~a~~l~~~~Pl~~~lla~-~--~~e~~~~~~~~~~~la~~Gv~ll~~~~~---~~~~~~G~l~~l~a~~~~a~~~  166 (292)
T PRK11272         93 NVPSGIAAVVVATVPLFTLCFSR-L--FGIRTRKLEWLGIAIGLAGIVLLNSGGN---LSGNPWGAILILIASASWAFGS  166 (292)
T ss_pred             cCcHHHHHHHHHHHHHHHHHHHH-H--hcccCchhHHHHHHHHHHhHHHHhcCcc---cccchHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999997 5  5899999999999999999998865322   1245689999999999999999


Q ss_pred             HHHHHHhhhCCCCChHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHH-HHHHHHHHHHHHHHHHHHHHHHHhh
Q 019428          178 NLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVY-GVLVFEAMATFIGQVSVLSLIALFG  256 (341)
Q Consensus       178 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~-~~l~l~~~~~~l~~~~~~~~i~~~s  256 (341)
                      +..||..++    ++.....+...++.+.+.+.....++...    ...++..| ..+++..+++.+++.++++++++.+
T Consensus       167 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~  238 (292)
T PRK11272        167 VWSSRLPLP----VGMMAGAAEMLAAGVVLLIASLLSGERLT----ALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVR  238 (292)
T ss_pred             HHHHhcCCC----cchHHHHHHHHHHHHHHHHHHHHcCCccc----ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            998875322    12334455555555555443333332110    01122233 3455556777899999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhccCC
Q 019428          257 AATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPAD  306 (341)
Q Consensus       257 a~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~~k~  306 (341)
                      +.+.++...++|+++.++|++++||++|+.+++|.++++.|+++.++.++
T Consensus       239 ~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~  288 (292)
T PRK11272        239 PALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999998876443

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.89  E-value=1.1e-20  Score=175.96  Aligned_cols=275  Identities=12%  Similarity=0.043  Sum_probs=197.6

Q ss_pred             cccCCCCCchhHHHHHHHHHHHHHHHhhccCC--hhHHHHHHHHHHHHHHHH-H-hcCCCCCCCchhHHHHHHHHHHHhh
Q 019428           13 SQIDPNGNNFSFALLGSSLVISSMASARLQFS--YGWYFTFIQGFVYLVLIY-L-QGFTTKQMMNPWKTYVKLSAVLMGS   88 (341)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~--~~~~lt~~q~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~   88 (341)
                      ++.|+ ..++.++.++...++.+..+.|+..+  -|..+.+.+++...++.. + +..+++.++.+++..+..++++...
T Consensus         6 ~~~~~-~~~~~~~~la~~~~~~~~~~~K~~~~~~~~~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   84 (293)
T PRK10532          6 RKLPV-WLPILLLLIAMASIQSGASLAKSLFPLVGAPGVTALRLALGTLILIAIFKPWRLRFAKEQRLPLLFYGVSLGGM   84 (293)
T ss_pred             ccccc-chHHHHHHHHHHHHHhhHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhHHhccCCHHHHHHHHHHHHHHHHH
Confidence            44444 66788899999999988888886432  356788888777654332 2 2111112234556666777777788


Q ss_pred             HHHHHHhhcCCchhHHHHHhhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHHhccCCCCCCCchHHHHHHHHH
Q 019428           89 HGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISG  168 (341)
Q Consensus        89 ~~l~~~sl~~is~~~~~l~ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~~G~~l~l~  168 (341)
                      ..+.+++++|++.+.++++..+.|+++++++      +||+++.  ..+.+.++|+.++...+.+. .+.+..|+++.++
T Consensus        85 ~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~------~~~~~~~--~~~~i~~~Gv~li~~~~~~~-~~~~~~G~ll~l~  155 (293)
T PRK10532         85 NYLFYLSIQTVPLGIAVALEFTGPLAVALFS------SRRPVDF--VWVVLAVLGLWFLLPLGQDV-SHVDLTGAALALG  155 (293)
T ss_pred             HHHHHHHHhcccHHHHHHHHHHHHHHHHHHh------cCChHHH--HHHHHHHHHHheeeecCCCc-ccCChHHHHHHHH
Confidence            8889999999999999999999999988654      3555444  44567789998765332211 2345789999999


Q ss_pred             HHHHHHhHHHHHHHHhhhCCCCChHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHH-HHHHHHHHHHHHHHHH
Q 019428          169 ALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVY-GVLVFEAMATFIGQVS  247 (341)
Q Consensus       169 a~~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~-~~l~l~~~~~~l~~~~  247 (341)
                      +++++|.+.+..|+..+++   ++... .+...++...+.+.....++. .     ..++..| ..+++..+++.+++.+
T Consensus       156 aa~~~a~~~v~~r~~~~~~---~~~~~-~~~~~~~~~~l~~~~~~~~~~-~-----~~~~~~~~~~l~lgv~~t~~~~~l  225 (293)
T PRK10532        156 AGACWAIYILSGQRAGAEH---GPATV-AIGSLIAALIFVPIGALQAGE-A-----LWHWSILPLGLAVAILSTALPYSL  225 (293)
T ss_pred             HHHHHHHHHHHHHHHhccC---CchHH-HHHHHHHHHHHHHHHHHccCc-c-----cCCHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999998876543   23333 344455554454433322210 0     0122223 2345666888899999


Q ss_pred             HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhccCCC
Q 019428          248 VLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADD  307 (341)
Q Consensus       248 ~~~~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~~k~~  307 (341)
                      +++++++.+|.++++...++|+++.++|++++||++++.+++|.++++.|++.+.+..++
T Consensus       226 ~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~  285 (293)
T PRK10532        226 EMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRR  285 (293)
T ss_pred             HHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCC
Confidence            999999999999999999999999999999999999999999999999999999866544

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.89  E-value=8e-25  Score=192.44  Aligned_cols=293  Identities=15%  Similarity=0.137  Sum_probs=232.6

Q ss_pred             hHHHHHHHHHHHHH-HHhh--ccCChhHHHHHHHHHHHHHHHH-H----hcCC----CCCCCc---hhHHHHHHHHHHHh
Q 019428           23 SFALLGSSLVISSM-ASAR--LQFSYGWYFTFIQGFVYLVLIY-L----QGFT----TKQMMN---PWKTYVKLSAVLMG   87 (341)
Q Consensus        23 ~~~~~~~~~~~~~~-i~~~--~~F~~~~~lt~~q~~~~~~~~~-~----~~~~----~~~~~~---~~~~~~~~~~~~~~   87 (341)
                      .|..++.+....++ ++..  ..-+-|.+.++.|+++...++. +    +++.    -+..+.   ..++.+++++.+.+
T Consensus        35 ~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~  114 (347)
T KOG1442|consen   35 LYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFIL  114 (347)
T ss_pred             ceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheeee
Confidence            33344444433433 3333  2457889999999999765432 2    1211    011122   35678899999999


Q ss_pred             hHHHHHHhhcCCchhHHHHHhhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHHhccCCCCCCCchHHHHHHHH
Q 019428           88 SHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMIS  167 (341)
Q Consensus        88 ~~~l~~~sl~~is~~~~~l~ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~~G~~l~l  167 (341)
                      ++.++|++|+|+++++|.+-|+.+.+|++++++++  +|+|-+.....++++++.|-.+-+-.|+.. +..++.|.++.+
T Consensus       115 mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvl--lkqkTs~~~~~~C~lIi~GF~lGvdqE~~~-~~ls~~GvifGV  191 (347)
T KOG1442|consen  115 MISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVL--LKQKTSFFALGCCLLIILGFGLGVDQEGST-GTLSWIGVIFGV  191 (347)
T ss_pred             ehhccceehhhcceEEEEeccchhhhHHHHhHHhh--cccccccccceeehhheehheecccccccc-CccchhhhHHHH
Confidence            99999999999999999999999999999999999  999999999999999999987765444322 356899999999


Q ss_pred             HHHHHHHhHHHHHHHHhhhCCCCChHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhh-chHHHHHHHHHHHHHHHHHH
Q 019428          168 GALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQ-HLYVYGVLVFEAMATFIGQV  246 (341)
Q Consensus       168 ~a~~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~-~~~~~~~l~l~~~~~~l~~~  246 (341)
                      .|.++-|+..++.||......+ ..+.+.+|++..+..+.+|.+.+.||+.+.+.+.+. ...+|..+.+++++++.-++
T Consensus       192 laSl~vAlnaiytkk~l~~v~~-~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgy  270 (347)
T KOG1442|consen  192 LASLAVALNAIYTKKVLPPVGD-CIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGY  270 (347)
T ss_pred             HHHHHHHHHHHhhheecccccC-eehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhh
Confidence            9999999999998876544332 347888999999999889988889998776654322 23467778888888887788


Q ss_pred             HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhccCCCCcccccccccch
Q 019428          247 SVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADDKPIKRTATSSFK  319 (341)
Q Consensus       247 ~~~~~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~~k~~~~~~~~~~~~~~  319 (341)
                      ...+-||.+||+|+++.++.|.+...++++.+++|.-+..-|-|-.+++.|...|++.|..+++++++.++++
T Consensus       271 vTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~~~~~s~~  343 (347)
T KOG1442|consen  271 VTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKASAQRSPA  343 (347)
T ss_pred             eeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhhccCCCcc
Confidence            8888999999999999999999999999999999999999999999999999999999988877766555544

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.89  E-value=8.8e-21  Score=176.73  Aligned_cols=270  Identities=11%  Similarity=0.080  Sum_probs=189.2

Q ss_pred             CCchhHHHHHHHHHHHHHHHhhccCC-hhHHHHHHHHHHHHHHH-HH---hcC-CCCCC-CchhHHH--HHH-HHHHHhh
Q 019428           19 GNNFSFALLGSSLVISSMASARLQFS-YGWYFTFIQGFVYLVLI-YL---QGF-TTKQM-MNPWKTY--VKL-SAVLMGS   88 (341)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~i~~~~~F~-~~~~lt~~q~~~~~~~~-~~---~~~-~~~~~-~~~~~~~--~~~-~~~~~~~   88 (341)
                      ..++.+++.+...++.+.++.|...+ -|..+++.|++....+. ..   ++- ++.++ ..+++.+  ... ++..+.+
T Consensus         7 ~~g~~~~l~a~~~wg~~~~~~k~~~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (296)
T PRK15430          7 RQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGGN   86 (296)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence            45788888888899998877775433 35788888877755322 11   110 00000 1122322  223 3446788


Q ss_pred             HHHHHHhhcCCchhHHHHHhhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHHhccCCCCCCCchHHHHHHHHH
Q 019428           89 HGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISG  168 (341)
Q Consensus        89 ~~l~~~sl~~is~~~~~l~ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~~G~~l~l~  168 (341)
                      ..+.+.|+++++++...++.++.|++++++++++  +|||+++++++++++.++|++++...+.    +..    .+.++
T Consensus        87 ~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~--l~E~~~~~~~~g~~l~~~Gv~li~~~~~----~~~----~~~l~  156 (296)
T PRK15430         87 WLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIF--LGERFRRMQWLAVILAICGVLVQLWTFG----SLP----IIALG  156 (296)
T ss_pred             HHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHH--hcCCCcHHHHHHHHHHHHHHHHHHHHcC----Ccc----HHHHH
Confidence            8999999999999999999999999999999999  9999999999999999999998864332    111    45777


Q ss_pred             HHHHHHhHHHHHHHHhhhCCCCChHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchH-HHHHHHHHHHHHHHHHHH
Q 019428          169 ALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLY-VYGVLVFEAMATFIGQVS  247 (341)
Q Consensus       169 a~~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~-~~~~l~l~~~~~~l~~~~  247 (341)
                      +++++|.+.+..|+..++. ..+......+..+.+.+...+.  .....    ......+. .+..++..++.+.+++.+
T Consensus       157 aa~~~a~~~i~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~g~~t~i~~~~  229 (296)
T PRK15430        157 LAFSFAFYGLVRKKIAVEA-QTGMLIETMWLLPVAAIYLFAI--ADSST----SHMGQNPMSLNLLLIAAGIVTTVPLLC  229 (296)
T ss_pred             HHHHHHHHHHHHHhcCCCC-chhHHHHHHHHHHHHHHHHHHH--ccCCc----ccccCCcHHHHHHHHHHHHHHHHHHHH
Confidence            8999999998887753221 1112222334344333332211  11110    00011222 233444445567899999


Q ss_pred             HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhccC
Q 019428          248 VLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPA  305 (341)
Q Consensus       248 ~~~~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~~k  305 (341)
                      ++.++++.+|.+++...+++|++++++|++++||++++.+++|+++++.|+.+.....
T Consensus       230 ~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~  287 (296)
T PRK15430        230 FTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDA  287 (296)
T ss_pred             HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999998888776543

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.87  E-value=1.8e-21  Score=166.71  Aligned_cols=273  Identities=15%  Similarity=0.186  Sum_probs=214.2

Q ss_pred             HHhhccCChhHHHHHHHHHHHHH-HHHHhcCCCC-CCCchhHHHHHHHHHHHhhHHHHHHhhcCCchhHHHHHhhcchHH
Q 019428           37 ASARLQFSYGWYFTFIQGFVYLV-LIYLQGFTTK-QMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLP  114 (341)
Q Consensus        37 i~~~~~F~~~~~lt~~q~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~sl~~is~~~~~l~ks~~pv~  114 (341)
                      +.+..+|+-...+.+.|.+++++ ++.++..+-. -|..+.+.|++++++....+..+.-++||.++|.|+++|..+.+.
T Consensus        28 Vls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR~t~aK~WfpiSfLLv~MIyt~SKsLqyL~vpiYTiFKNltII~  107 (309)
T COG5070          28 VLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFRLTKAKKWFPISFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIIL  107 (309)
T ss_pred             eecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhheehhhhhhhcCHHHHHHHHHHhcccceeeeeeeHHHHhccceeeh
Confidence            44555899889999999888664 3444322110 123467889999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcccccccChhHHHHHHHHHHHHHHHhccCCCCC---CCchHHHHHHHHHHHHHHHhHHHHHHHHhhhCCCCC
Q 019428          115 VMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTS---PNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETT  191 (341)
Q Consensus       115 v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~~~~~~~~---~~~~~~G~~l~l~a~~~~al~~v~~~~~~~~~~~~~  191 (341)
                      ++..+..+  |+.|.+.....+.+++++.-.+..++|.+..   ...--.|++|+...++..+.+-...|+..+-.. ..
T Consensus       108 iAygEvl~--Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN~GY~Wm~~NclssaafVL~mrkri~ltN-f~  184 (309)
T COG5070         108 IAYGEVLF--FGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLTN-FK  184 (309)
T ss_pred             hHhhHHHH--hcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccCCceEEEehhhHhHHHHHHHHHHhhcccc-cc
Confidence            99999999  9999999999999999999999999886431   112236999999999999888777666554321 22


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHh-hchHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 019428          192 QMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCS-QHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAV  270 (341)
Q Consensus       192 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~-~~~~~~~~l~l~~~~~~l~~~~~~~~i~~~sa~t~si~~~l~~v~  270 (341)
                      .++.++|+++++.|.++...+..+|.. .-+... ..+.....+..++++++.-.++.-++++.+|+++.+++|.+++..
T Consensus       185 d~dtmfYnNllslPiL~~~s~~~edws-~~n~annl~~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp  263 (309)
T COG5070         185 DFDTMFYNNLLSLPILLSFSFLFEDWS-PGNLANNLSVDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLP  263 (309)
T ss_pred             hhhHHHHhhhHHHHHHHHHHHHhccCC-cchhhcCCChHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhCh
Confidence            478899999999999877655444421 111111 123344556777888766677888999999999999999999999


Q ss_pred             HHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhccCCCCccccc
Q 019428          271 TLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADDKPIKRT  313 (341)
Q Consensus       271 ~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~~k~~~~~~~~  313 (341)
                      ..+.|.++||+|.+...+..+.+-+....+|...|.+++++.+
T Consensus       264 ~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~q~q~  306 (309)
T COG5070         264 IALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQQNQK  306 (309)
T ss_pred             HHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            9999999999999999999999999999999998876554433

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.83  E-value=1.7e-18  Score=160.11  Aligned_cols=209  Identities=11%  Similarity=0.060  Sum_probs=156.0

Q ss_pred             HHHHHhhHHHHHHhhcCCchhHHHHHhhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHHhccCCCCCCCchHH
Q 019428           82 SAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMI  161 (341)
Q Consensus        82 ~~~~~~~~~l~~~sl~~is~~~~~l~ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~~  161 (341)
                      ++.......+.+.++++.+.+....+.++.|++++++++++  +|||+++++++++.+++.|+.+....+.+   +.+..
T Consensus        70 ~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~--~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~---~~~~~  144 (281)
T TIGR03340        70 AVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLT--LGETLSPLAWLGILIITLGLLVLGLSRFA---QHRRK  144 (281)
T ss_pred             HHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHhccccc---ccchh
Confidence            44567888899999999999999999999999999999999  99999999999999999999988754422   23457


Q ss_pred             HHHHHHHHHHHHHhHHHHHHHHhhhCCCC-ChHHHHHHHHHHH-HHHHHHHHhhcchHHHHHHHHhhchHHHHHHHHHHH
Q 019428          162 GVIMISGALIMDSFLGNLQEAIFTMNPET-TQMEMLFCSTVVG-LPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAM  239 (341)
Q Consensus       162 G~~l~l~a~~~~al~~v~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~l~l~~~  239 (341)
                      |+.+.++++++++.+.+..|+..++.++. +......+..... .++..+. ...++.  ...  ......+..++..++
T Consensus       145 g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~--~~~~~~~~~~~~~~~  219 (281)
T TIGR03340       145 AYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLY-LKRHGR--SMF--PYARQILPSATLGGL  219 (281)
T ss_pred             HHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHH-HHHhcc--chh--hhHHHHHHHHHHHHH
Confidence            88899999999999998876643322111 1111122222211 2222111 111110  000  011123445666678


Q ss_pred             HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHH
Q 019428          240 ATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITL  300 (341)
Q Consensus       240 ~~~l~~~~~~~~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~  300 (341)
                      ++.+++.++++++++.++.+.+....++|+++.++|++++||++++.+++|.++++.|+.+
T Consensus       220 ~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       220 MIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            8889999999999999999999999999999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.77  E-value=9e-16  Score=141.27  Aligned_cols=214  Identities=15%  Similarity=0.191  Sum_probs=160.8

Q ss_pred             HHHHHH-HHHHhhHHHHHHhhcCCchhHHHHHhhcchHHHHHHHH-hhcccccccChhHHHHHHHHHHHHHHHhccCCCC
Q 019428           77 TYVKLS-AVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGA-FIPGLRRKYPAHEYVSALLLVVGLILFTLADAQT  154 (341)
Q Consensus        77 ~~~~~~-~~~~~~~~l~~~sl~~is~~~~~l~ks~~pv~v~ll~~-l~~~~~~k~s~~~~~~l~l~~~Gv~l~~~~~~~~  154 (341)
                      .....+ +.......+.+.++++++.+..+++.++.|+++.++++ ++  +|||++++++.++++..+|+.++...+...
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~--~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~  148 (292)
T COG0697          71 LLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLL--LGERLSLLQILGILLALAGVLLILLGGGGG  148 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHH--ccCCCcHHHHHHHHHHHHhHHheecCCCcc
Confidence            344444 44577888899999999999999999999999999997 66  699999999999999999999998766532


Q ss_pred             CCCchHHHHHHHHHHHHHHHhHHHHHHHHhhhCCCCChHHHHH-HHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHH-H
Q 019428          155 SPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLF-CSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVY-G  232 (341)
Q Consensus       155 ~~~~~~~G~~l~l~a~~~~al~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~-~  232 (341)
                      ..+ ...|+.+.+++++++|++.+.+|+.. +.   ++..... +... ........... .+..     .......+ .
T Consensus       149 ~~~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~~---~~~~~~~~~~~~-~~~~~~~~~~~-~~~~-----~~~~~~~~~~  216 (292)
T COG0697         149 GIL-SLLGLLLALAAALLWALYTALVKRLS-RL---GPVTLALLLQLL-LALLLLLLFFL-SGFG-----APILSRAWLL  216 (292)
T ss_pred             hhH-HHHHHHHHHHHHHHHHHHHHHHHHhc-CC---ChHHHHHHHHHH-HHHHHHHHHHh-cccc-----ccCCHHHHHH
Confidence            111 47899999999999999999998876 22   2333333 2222 11111111111 1000     01111223 2


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhcc
Q 019428          233 VLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLP  304 (341)
Q Consensus       233 ~l~l~~~~~~l~~~~~~~~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~~  304 (341)
                      ......+.+.+++.+++..+++.++...++...++|+.+++++++++||+++..+++|.++++.|+.+....
T Consensus       217 ~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         217 LLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            333444555578999999999999999999999999999999999999999999999999999999998865

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.75  E-value=8.3e-17  Score=145.35  Aligned_cols=214  Identities=18%  Similarity=0.268  Sum_probs=164.3

Q ss_pred             hhHHHHHHHHHHHhhHHHHHHhhcCCchhHHHHHhhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHHhccCCC
Q 019428           74 PWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQ  153 (341)
Q Consensus        74 ~~~~~~~~~~~~~~~~~l~~~sl~~is~~~~~l~ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~~~~~~  153 (341)
                      +..++...+++|+..+.+.+.++++++.+++|+.++++.++++++++++  +|||.+++||.++.+.++|++++..++..
T Consensus        16 ~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~--L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~   93 (244)
T PF04142_consen   16 DTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLL--LKRRLSRRQWLALFLLVAGVVLVQLSSSQ   93 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHH--HHcccchhhHHHHHHHHHHHheeecCCcc
Confidence            4566777799999999999999999999999999999999999999999  99999999999999999999998776543


Q ss_pred             CC-------------CCchHHHHHHHHHHHHHHHhHHHHHHHHhhhCCCCChHHHHHHHHHHHHHHHHHHHhhc-chHHH
Q 019428          154 TS-------------PNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLT-GELFK  219 (341)
Q Consensus       154 ~~-------------~~~~~~G~~l~l~a~~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-g~~~~  219 (341)
                      ..             ......|+.+++.+++++|+..++.||++|+.+ .+.+........+|.++.++..... ++-..
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~-~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~  172 (244)
T PF04142_consen   94 SSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSN-VSLWIQNMQLYLFGILFNLLALLLSDGSAIS  172 (244)
T ss_pred             ccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccc-hhHHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence            20             123579999999999999999999999998754 3444444444555555554433222 21100


Q ss_pred             HHHHHh-hchHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHH
Q 019428          220 AWNSCS-QHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLI  294 (341)
Q Consensus       220 ~~~~~~-~~~~~~~~l~l~~~~~~l~~~~~~~~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~li  294 (341)
                      ...+.+ .++..|..    .+..+++-+..-..+|+.+...-+....+.-+++.++++++||.++|....+|..++
T Consensus       173 ~~g~f~G~~~~~~~~----i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V  244 (244)
T PF04142_consen  173 ESGFFHGYSWWVWIV----IFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV  244 (244)
T ss_pred             cCCchhhcchHHHHH----HHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence            000111 12223322    244455667777899999999999999999999999999999999999999998653

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>TIGR00688 rarD rarD protein

Probab=99.74  E-value=1.6e-15  Score=138.36  Aligned_cols=240  Identities=10%  Similarity=0.023  Sum_probs=164.0

Q ss_pred             CchhHHHHHHHHHHHHHHHhhccC-ChhHHHHHHHHHHHHHH-HH-H--hcCCC----C-C-C-Cch-hHHHHHHHHHHH
Q 019428           20 NNFSFALLGSSLVISSMASARLQF-SYGWYFTFIQGFVYLVL-IY-L--QGFTT----K-Q-M-MNP-WKTYVKLSAVLM   86 (341)
Q Consensus        20 ~~~~~~~~~~~~~~~~~i~~~~~F-~~~~~lt~~q~~~~~~~-~~-~--~~~~~----~-~-~-~~~-~~~~~~~~~~~~   86 (341)
                      +++.+++++..+++.+.++.|+-. -.|..+++.+++...++ .. .  ++.++    + + . +.+ +......+++.+
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~~~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   81 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLLKPLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLIG   81 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHHH
Confidence            367788899999999988888622 35678889998875543 21 1  21110    0 0 0 111 112334466678


Q ss_pred             hhHHHHHHhhcCCchhHHHHHhhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHHhccCCCCCCCchHHHHHHH
Q 019428           87 GSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMI  166 (341)
Q Consensus        87 ~~~~l~~~sl~~is~~~~~l~ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~~G~~l~  166 (341)
                      .+..+.+.|+++++++.++++.++.|++++++++++  +|||+++++++++++.++|++++...+.    +..    .++
T Consensus        82 ~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~--l~Ek~~~~~~l~~~~~~~Gv~li~~~~~----~~~----~~~  151 (256)
T TIGR00688        82 FNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVF--LKERISRFQFIAVIIATLGVISNIVLKG----SLP----WEA  151 (256)
T ss_pred             HHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHH--HhcCCCHHHHHHHHHHHHHHHHHHHHcC----Cch----HHH
Confidence            888999999999999999999999999999999999  9999999999999999999998764321    111    356


Q ss_pred             HHHHHHHHhHHHHHHHHhhhCCCCChHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhch-HHHHHHHHHHHHHHHHH
Q 019428          167 SGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHL-YVYGVLVFEAMATFIGQ  245 (341)
Q Consensus       167 l~a~~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~-~~~~~l~l~~~~~~l~~  245 (341)
                      +++++++|.+.+..|+..++    +..+...+ .....|...+.....+. .. ..  ..++ ..|..++..++.+.+++
T Consensus       152 l~aa~~~a~~~i~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~-~~-~~--~~~~~~~~~~l~~~g~~t~i~~  222 (256)
T TIGR00688       152 LVLAFSFTAYGLIRKALKNT----DLAGFCLE-TLSLMPVAIYYLLQTDF-AT-VQ--QTNPFPIWLLLVLAGLITGTPL  222 (256)
T ss_pred             HHHHHHHHHHHHHHhhcCCC----CcchHHHH-HHHHHHHHHHHHHHhcc-Cc-cc--ccCchhHHHHHHHHHHHHHHHH
Confidence            78899999999998875432    12222222 22222222221111111 00 00  0111 23444445556688999


Q ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHh
Q 019428          246 VSVLSLIALFGAATTAMVTTARKAVTLLLSYLI  278 (341)
Q Consensus       246 ~~~~~~i~~~sa~t~si~~~l~~v~~ills~~~  278 (341)
                      .+++.++++.+|.+.++..+++|+++.++|.++
T Consensus       223 ~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       223 LAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.73  E-value=1.5e-16  Score=133.57  Aligned_cols=142  Identities=17%  Similarity=0.308  Sum_probs=118.6

Q ss_pred             HHHHHHHHHHHHHhHHHHHHHHhhhC----CCCChHHHHHHHHHHHHHHHHHHHhhcchHHH--HHHHHhh-----chHH
Q 019428          162 GVIMISGALIMDSFLGNLQEAIFTMN----PETTQMEMLFCSTVVGLPMLIPPMLLTGELFK--AWNSCSQ-----HLYV  230 (341)
Q Consensus       162 G~~l~l~a~~~~al~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~--~~~~~~~-----~~~~  230 (341)
                      |+++++.|.++.|+++++.|+.+++.    .+.++.++++|+++.+.+.++|..+..++...  .......     .+..
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            78899999999999999999988874    45788999999999999998887655443221  1111111     2345


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhc
Q 019428          231 YGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLL  303 (341)
Q Consensus       231 ~~~l~l~~~~~~l~~~~~~~~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~  303 (341)
                      +..++.+++.++..+.+.+.+++++||+++++++++|++..+++|+++|||++|+.+++|+++++.|+.+|+|
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            5567777888888899999999999999999999999999999999999999999999999999999999985

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.73  E-value=1.5e-15  Score=139.88  Aligned_cols=226  Identities=19%  Similarity=0.217  Sum_probs=170.5

Q ss_pred             HHHHHHHHHHHhhHHHHHHhhcCCchhHHHHHhhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHHhccCCC--
Q 019428           76 KTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQ--  153 (341)
Q Consensus        76 ~~~~~~~~~~~~~~~l~~~sl~~is~~~~~l~ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~~~~~~--  153 (341)
                      .+....+++|++.+-+.+.++.+.+.+++++....+...|+++..++  +|||.+++||.++++.++|++++.....+  
T Consensus        93 lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~--L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~  170 (345)
T KOG2234|consen   93 LKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLI--LRRKLSRLQWMALVLLFAGVALVQLPSLSPT  170 (345)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHH--HhhhhhHHHHHHHHHHHHHHHHHhccCCCCC
Confidence            34556678899999999999999999999999999999999999999  99999999999999999999999833221  


Q ss_pred             -C----CCCchHHHHHHHHHHHHHHHhHHHHHHHHhhhCCCCChHHHHHHHHHHHHHHHHHHHhhc-chHHHHHHHHhhc
Q 019428          154 -T----SPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLT-GELFKAWNSCSQH  227 (341)
Q Consensus       154 -~----~~~~~~~G~~l~l~a~~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-g~~~~~~~~~~~~  227 (341)
                       .    ...+.+.|....+.+++.+|+..++.||++++.. .+.+-.......+|.++.+...+.. ++-.....+.+.+
T Consensus       171 ~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~-~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~  249 (345)
T KOG2234|consen  171 GAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSN-VSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGY  249 (345)
T ss_pred             CccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccc
Confidence             1    1245789999999999999999999999998653 3333333333444555555443332 2211111112222


Q ss_pred             h-HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhccCC
Q 019428          228 L-YVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPAD  306 (341)
Q Consensus       228 ~-~~~~~l~l~~~~~~l~~~~~~~~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~~k~  306 (341)
                      . ..|..++.    .+++-++....+|+.+...-+....+-.+++.+.|+.+||.++|....+|..+++.++.+|...+.
T Consensus       250 s~~vw~vVl~----~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~  325 (345)
T KOG2234|consen  250 SSIVWLVVLL----NAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPA  325 (345)
T ss_pred             cHHHHHHHHH----HhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCc
Confidence            2 23433333    344556666788888888888888888899999999999999999999999999999999996555


Q ss_pred             CC
Q 019428          307 DK  308 (341)
Q Consensus       307 ~~  308 (341)
                      +.
T Consensus       326 ~~  327 (345)
T KOG2234|consen  326 RD  327 (345)
T ss_pred             cc
Confidence            43

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.68  E-value=6.4e-14  Score=130.16  Aligned_cols=263  Identities=12%  Similarity=0.078  Sum_probs=178.0

Q ss_pred             hhHHHHHHHHHHHHHHHhhc--cCChhHHHHHHHHHHHHH-HHHH-hcCCCCCCCchhHHHHHH----HHHHHhhHHHHH
Q 019428           22 FSFALLGSSLVISSMASARL--QFSYGWYFTFIQGFVYLV-LIYL-QGFTTKQMMNPWKTYVKL----SAVLMGSHGLTK   93 (341)
Q Consensus        22 ~~~~~~~~~~~~~~~i~~~~--~F~~~~~lt~~q~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~   93 (341)
                      +.+++.+...++.+.+..|.  +++.++..   .+..... +..+ ..++.++  .+.+..+..    ++.......+.+
T Consensus         3 ~l~~lia~~~wGs~g~~~k~~~g~~~~~~~---~~~~g~l~~~~~~~~~~~~~--~~~~~~~~~g~l~G~~w~ig~~~~~   77 (290)
T TIGR00776         3 ILIALIPALFWGSFVLINVKIGGGPYSQTL---GTTFGALILSIAIAIFVLPE--FWALSIFLVGLLSGAFWALGQINQF   77 (290)
T ss_pred             hHHHHHHHHHHhhhHHHHhccCCCHHHHHH---HHHHHHHHHHHHHHHHhCCc--ccccHHHHHHHHHHHHHHhhhhhHH
Confidence            45677777888888766654  34444443   1222221 1111 1111111  121222332    344667778999


Q ss_pred             HhhcCCchhHHHHHhh-cchHHHHHHHHhhcccccccChhH----HHHHHHHHHHHHHHhccCCCCCC----CchHHHHH
Q 019428           94 GSLAFLNYPAQLMFKS-TKVLPVMVMGAFIPGLRRKYPAHE----YVSALLLVVGLILFTLADAQTSP----NFSMIGVI  164 (341)
Q Consensus        94 ~sl~~is~~~~~l~ks-~~pv~v~ll~~l~~~~~~k~s~~~----~~~l~l~~~Gv~l~~~~~~~~~~----~~~~~G~~  164 (341)
                      .+.++++++.+..+-+ ..++++.+.+.++  +|||.++++    +++++++++|+++....+.+...    .+...|++
T Consensus        78 ~ai~~~gva~a~~i~~~~~~v~~~l~~~~~--f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~  155 (290)
T TIGR00776        78 KSMRYMGVSKTMPISTGFQLVGGTLFGVIV--FGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGIL  155 (290)
T ss_pred             HHHHHHhHHHHhHHHHHHHHHHHHHHHHHH--hhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHH
Confidence            9999999999987777 7778889999999  999999999    99999999999988765433211    22368999


Q ss_pred             HHHHHHHHHHhHHHHHHHHhhhCCCCChHHHHHH---HHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHHHHHHHHH
Q 019428          165 MISGALIMDSFLGNLQEAIFTMNPETTQMEMLFC---STVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMAT  241 (341)
Q Consensus       165 l~l~a~~~~al~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~l~l~~~~~  241 (341)
                      +.++|.++++.+.+..|+.  +   .++.+..+.   ...++.....+.. ...   +.+    .....+..++ .++..
T Consensus       156 ~~l~sg~~y~~~~~~~~~~--~---~~~~~~~~~~~~g~~~~~~~~~~~~-~~~---~~~----~~~~~~~~~~-~Gi~~  221 (290)
T TIGR00776       156 LLLMSTIGYLVYVVVAKAF--G---VDGLSVLLPQAIGMVIGGIIFNLGH-ILA---KPL----KKYAILLNIL-PGLMW  221 (290)
T ss_pred             HHHHHHHHHHHHHHHHHHc--C---CCcceehhHHHHHHHHHHHHHHHHH-hcc---cch----HHHHHHHHHH-HHHHH
Confidence            9999999999999888754  2   234444322   2222222222111 000   000    1112333333 45556


Q ss_pred             HHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhh----HHHHHHHHHHHHHhccC
Q 019428          242 FIGQVSVLSLIA-LFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHG----TGLLLIAMGITLKLLPA  305 (341)
Q Consensus       242 ~l~~~~~~~~i~-~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~----iG~~lil~Gv~~y~~~k  305 (341)
                      .+++.+++...+ +.++.++++...++|+.+.+.+++++||+.++.++    +|.++++.|+.+-...|
T Consensus       222 ~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~~~  290 (290)
T TIGR00776       222 GIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGIGK  290 (290)
T ss_pred             HHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhccC
Confidence            888999999999 99999999999999999999999999999999999    99999999998876543

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.66  E-value=1e-15  Score=140.88  Aligned_cols=218  Identities=12%  Similarity=0.202  Sum_probs=172.5

Q ss_pred             HHHhhHHHHHHhhcCCchhHHHHHhhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHHhccCCCC----CCCch
Q 019428           84 VLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQT----SPNFS  159 (341)
Q Consensus        84 ~~~~~~~l~~~sl~~is~~~~~l~ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~~~~~~~----~~~~~  159 (341)
                      +.+.+....|.||.|++++..+++.+++-+||.+++.++  -.||+++.+.+++++.+.|+++++.+|...    .+...
T Consensus       168 lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if--~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~~~  245 (416)
T KOG2765|consen  168 LWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIF--PVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPASRP  245 (416)
T ss_pred             HHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHc--CcchhhHHHHHHHHHhhccEEEEEeccccccccCCccch
Confidence            346777889999999999999999999999999999999  789999999999999999999999886532    23456


Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHhhhCC-CCChHHHHH-HHHHHHHHHHHHHHhhcchH-HHHHHHHhhchHHHHHHHH
Q 019428          160 MIGVIMISGALIMDSFLGNLQEAIFTMNP-ETTQMEMLF-CSTVVGLPMLIPPMLLTGEL-FKAWNSCSQHLYVYGVLVF  236 (341)
Q Consensus       160 ~~G~~l~l~a~~~~al~~v~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~l~~~~~~~g~~-~~~~~~~~~~~~~~~~l~l  236 (341)
                      ..|.++++++++.||.|.++.||-..+++ +.+ +++.+ |..++...++.|.+++-.-. .+.++. .....+...++.
T Consensus       246 llG~llaL~sA~~YavY~vllk~~~~~eg~rvd-i~lffGfvGLfnllllwP~l~iL~~~~~e~F~l-P~~~q~~~vv~~  323 (416)
T KOG2765|consen  246 LLGNLLALLSALLYAVYTVLLKRKIGDEGERVD-IQLFFGFVGLFNLLLLWPPLIILDFFGEERFEL-PSSTQFSLVVFN  323 (416)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhccccccccc-HHHHHHHHHHHHHHHHhHHHHHHHHhccCcccC-CCCceeEeeeHh
Confidence            89999999999999999999988766653 444 44443 56666666666543321100 111110 111122233455


Q ss_pred             HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhccC
Q 019428          237 EAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPA  305 (341)
Q Consensus       237 ~~~~~~l~~~~~~~~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~~k  305 (341)
                      +++.+++.-++|-++.-.++|+++++..++.-.++++..+++-|+++|+.+++|.+.+++|....++..
T Consensus       324 ~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~  392 (416)
T KOG2765|consen  324 NLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISS  392 (416)
T ss_pred             hHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccc
Confidence            667888888999999999999999999999999999999999999999999999999999999888754

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.66  E-value=1.6e-13  Score=123.32  Aligned_cols=277  Identities=13%  Similarity=0.110  Sum_probs=193.4

Q ss_pred             CCCCchhHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHH---H---hcCCCC-C-CCch--hHHHHHHHHHHH
Q 019428           17 PNGNNFSFALLGSSLVISSMASARLQFSYGWYFTFIQGFVYLVLIY---L---QGFTTK-Q-MMNP--WKTYVKLSAVLM   86 (341)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~i~~~~~F~~~~~lt~~q~~~~~~~~~---~---~~~~~~-~-~~~~--~~~~~~~~~~~~   86 (341)
                      ....|+.+.+++...++..+.|.|+--+-|-+--..|..+++....   +   ++.+.- . .+.|  +..+...+++..
T Consensus         4 ~~~~Gil~~l~Ay~lwG~lp~y~kll~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~   83 (293)
T COG2962           4 DSRKGILLALLAYLLWGLLPLYFKLLEPLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIG   83 (293)
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHH
Confidence            3457899999999999999999998778888888888888664221   1   222211 0 1222  222333345556


Q ss_pred             hhHHHHHHhhcCCchhHHHHHhhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHHhccCCCCCCCchHHHHHHH
Q 019428           87 GSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMI  166 (341)
Q Consensus        87 ~~~~l~~~sl~~is~~~~~l~ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~~G~~l~  166 (341)
                      .+...-.+|-+.=.+--+.+-....|++.++++.++  +|||.++.|++++.++.+||..-.+..+    +..+..+.++
T Consensus        84 ~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lf--lkErls~~Q~iAV~lA~~GV~~~~~~~g----~lpwval~la  157 (293)
T COG2962          84 LNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLF--LKERLSRLQWIAVGLAAAGVLIQTWLLG----SLPWVALALA  157 (293)
T ss_pred             HHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHH--HHhhccHHHHHHHHHHHHHHHHHHHHcC----CCcHHHHHHH
Confidence            666666666666444445566777899999999999  9999999999999999999999887654    3455555544


Q ss_pred             HHHHHHHHhHHHHHHHHhhhCCCCChHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHh-hchHHHHHHHHHHHHHHHHH
Q 019428          167 SGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCS-QHLYVYGVLVFEAMATFIGQ  245 (341)
Q Consensus       167 l~a~~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~-~~~~~~~~l~l~~~~~~l~~  245 (341)
                          +.+++|...-|++ +    .++.+-...-.++-.|..+...+..++-.+   +.. .++..+..+...+..+++.-
T Consensus       158 ----~sf~~Ygl~RK~~-~----v~a~~g~~lE~l~l~p~al~yl~~l~~~~~---~~~~~~~~~~~LLv~aG~vTavpL  225 (293)
T COG2962         158 ----LSFGLYGLLRKKL-K----VDALTGLTLETLLLLPVALIYLLFLADSGQ---FLQQNANSLWLLLVLAGLVTAVPL  225 (293)
T ss_pred             ----HHHHHHHHHHHhc-C----CchHHhHHHHHHHHhHHHHHHHHHHhcCch---hhhcCCchHHHHHHHhhHHHHHHH
Confidence                4677887554332 2    233333333333333333222221111111   112 34455666777888888999


Q ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhccCCCCccc
Q 019428          246 VSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADDKPIK  311 (341)
Q Consensus       246 ~~~~~~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~~k~~~~~~  311 (341)
                      .++..+-++.+=.+.++..+++|....+++++++||+++..+....+++-.|+.+|.....++.+|
T Consensus       226 ~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l~~~r~  291 (293)
T COG2962         226 LLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGLYTARK  291 (293)
T ss_pred             HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            999999999999999999999999999999999999999999999999999999999876554433

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.65  E-value=1.9e-14  Score=127.60  Aligned_cols=224  Identities=16%  Similarity=0.170  Sum_probs=171.7

Q ss_pred             HHHHHHHHHhhHHHHHHhhcCCchhHHHHHhhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHHhccCCCC---
Q 019428           78 YVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQT---  154 (341)
Q Consensus        78 ~~~~~~~~~~~~~l~~~sl~~is~~~~~l~ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~~~~~~~---  154 (341)
                      +++.+++...+..+.|.+|.+++.+.+|++|-...+||-+++..+  ++++++.+||+++..+.+|++++...|...   
T Consensus        89 fl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~--Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~  166 (372)
T KOG3912|consen   89 FLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMF--LNRTITGRQWLGILFVSLGLVIVGSLDVHLVTD  166 (372)
T ss_pred             ecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHH--HhcccchhhHHHHHHHHhhhheeeeeecccccC
Confidence            456788998999999999999999999999999999999999999  999999999999999999999998875432   


Q ss_pred             ---CCCchHHHHHHHHHHHHHHHhHHHHHHHHhhhCCCCChHHHHHHHHHHHHHHHHH----HHh-hcch---------H
Q 019428          155 ---SPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIP----PML-LTGE---------L  217 (341)
Q Consensus       155 ---~~~~~~~G~~l~l~a~~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~-~~g~---------~  217 (341)
                         +.+..+.|+.+++.|-+.-|.+.++.||.++++. .+|.+..-|..+++..++..    ... -.|+         +
T Consensus       167 p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~n-V~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~  245 (372)
T KOG3912|consen  167 PYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSN-VAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVL  245 (372)
T ss_pred             CccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhcc-CCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcch
Confidence               1245689999999999999999999999888753 66787777666665433221    111 1121         1


Q ss_pred             HH---HHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHH
Q 019428          218 FK---AWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLI  294 (341)
Q Consensus       218 ~~---~~~~~~~~~~~~~~l~l~~~~~~l~~~~~~~~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~li  294 (341)
                      .+   .+......|.....+....+.-++.|..-....|..||+|-.+.-.+|..+.-+++..+..|.+...|+.|.++.
T Consensus       246 eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliL  325 (372)
T KOG3912|consen  246 EDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLIL  325 (372)
T ss_pred             hhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHH
Confidence            11   111111223322222222222233345556889999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcc
Q 019428          295 AMGITLKLLP  304 (341)
Q Consensus       295 l~Gv~~y~~~  304 (341)
                      +.|+++|+-.
T Consensus       326 i~Gi~lY~~i  335 (372)
T KOG3912|consen  326 IMGIILYNQI  335 (372)
T ss_pred             HHHHHHHHHH
Confidence            9999999754

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.61  E-value=1.9e-17  Score=144.82  Aligned_cols=268  Identities=15%  Similarity=0.166  Sum_probs=188.6

Q ss_pred             HHHHHHHHHHHHHhhccCChhHHHHHHHHHHHH-HHHHHhcCCCCCCCchhHHHHHHHHHHHhhHHHHHHhhcCCchhHH
Q 019428           26 LLGSSLVISSMASARLQFSYGWYFTFIQGFVYL-VLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQ  104 (341)
Q Consensus        26 ~~~~~~~~~~~i~~~~~F~~~~~lt~~q~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sl~~is~~~~  104 (341)
                      +|+++.-..+.-.++-+-+.|..=+++....-. +-..+..||.+..+..|+.|+.+++...-++.+--.|+||++....
T Consensus        28 L~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~~~~~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi  107 (336)
T KOG2766|consen   28 LLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRRKYIKAKWRHYILLAFVDVEANYFVVKAYQYTSMTSI  107 (336)
T ss_pred             HHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhhHHHHHHHHHhhheeEEeecccEEEeeehhhcchHHH
Confidence            333333333333344345666665555522211 1122234555455678899999988877777777889999999999


Q ss_pred             HHHhhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHHhccCCCC----CCCchHHHHHHHHHHHHHHHhHHHHH
Q 019428          105 LMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQT----SPNFSMIGVIMISGALIMDSFLGNLQ  180 (341)
Q Consensus       105 ~l~ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~~~~~~~----~~~~~~~G~~l~l~a~~~~al~~v~~  180 (341)
                      +++.+...+.+++++|++  +|.|+.+-++.+++++..|++++..+|...    .+++...|+.+.++++-++|..++.+
T Consensus       108 ~lLDcwaip~v~~lsw~f--LktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSNv~E  185 (336)
T KOG2766|consen  108 MLLDCWAIPCVLVLSWFF--LKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNVSE  185 (336)
T ss_pred             HHHHHhhhHHHHHHHHHH--HHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeeeccccH
Confidence            999999999999999999  999999999999999999999998887543    24567899999999999999999999


Q ss_pred             HHHhhhCCCCChHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Q 019428          181 EAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATT  260 (341)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~l~l~~~~~~l~~~~~~~~i~~~sa~t~  260 (341)
                      |.+.++   .+..+++-...++|++...+=.+.+..  +. ...+.+.....++. ...+-++.+.+.-..+|..||+..
T Consensus       186 Eflvkn---~d~~elm~~lgLfGaIIsaIQ~i~~~~--~~-~tl~w~~~i~~yl~-f~L~MFllYsl~pil~k~~~aT~~  258 (336)
T KOG2766|consen  186 EFLVKN---ADRVELMGFLGLFGAIISAIQFIFERH--HV-STLHWDSAIFLYLR-FALTMFLLYSLAPILIKTNSATMF  258 (336)
T ss_pred             HHHHhc---CcHHHHHHHHHHHHHHHHHHHHhhhcc--ce-eeEeehHHHHHHHH-HHHHHHHHHHhhHHheecCCceEE
Confidence            887665   345677766666665544321111110  00 00000111112222 233334555556688999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhcc
Q 019428          261 AMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLP  304 (341)
Q Consensus       261 si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~~  304 (341)
                      ++.-...+..++++  ..||-+++|...+..+.+..|.++|...
T Consensus       259 nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~r  300 (336)
T KOG2766|consen  259 NLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTR  300 (336)
T ss_pred             EhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeecc
Confidence            99999999999998  7788889999999999999999999543

>TIGR00803 nst UDP-galactose transporter

Probab=99.60  E-value=8.9e-15  Score=130.71  Aligned_cols=192  Identities=18%  Similarity=0.261  Sum_probs=139.8

Q ss_pred             CchhHHHHHhhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHHhccCCCC-----------------------C
Q 019428           99 LNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQT-----------------------S  155 (341)
Q Consensus        99 is~~~~~l~ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~~~~~~~-----------------------~  155 (341)
                      +++|.++..|+..++++++.++.+  ++||++..|+++.+++..|+.....+|.+.                       .
T Consensus         2 isvPa~~~~~s~~l~~v~l~~~~~--~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~   79 (222)
T TIGR00803         2 LSVPIHIIFKQNNLVLIALGNLLA--AGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLM   79 (222)
T ss_pred             ccccchHHHHhcchHHHHHhcccc--cceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccc
Confidence            578999999999999999999999  899999999999999999998644433210                       1


Q ss_pred             CCchHHHHHHHHHHHHHHHhHHHHHHHHhhhCCCCChHHHHHHHHHHHHHHHHHHH-----hh-cchHHHHHHHHhhchH
Q 019428          156 PNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPM-----LL-TGELFKAWNSCSQHLY  229 (341)
Q Consensus       156 ~~~~~~G~~l~l~a~~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~-~g~~~~~~~~~~~~~~  229 (341)
                      .++.+.|....+.++.++++..+++|+..++++ .     ++|.+.++.+...+..     .. .++......+...+|.
T Consensus        80 ~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~-~-----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (222)
T TIGR00803        80 FGNPVVGLSAVLSALLSSGFAGVYFEKILKDGD-T-----MFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPT  153 (222)
T ss_pred             cccHHHHHHHHHHHHHHHhhhHHHHHHcccCCC-C-----chHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCch
Confidence            134678888899999999999999999766432 1     2344333333332211     11 1111111111112232


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHH
Q 019428          230 VYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLK  301 (341)
Q Consensus       230 ~~~~l~l~~~~~~l~~~~~~~~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y  301 (341)
                      ....+   .+..++++.+..+++|+.|+++.+++.+++++++.++|+++|||++++.+++|..+++.|+.+|
T Consensus       154 ~~~~~---~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       154 AVWIV---GLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             HHHHH---HHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            22112   2444667788899999999999999999999999999999999999999999999999998765

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.52  E-value=2.6e-11  Score=106.62  Aligned_cols=255  Identities=13%  Similarity=0.061  Sum_probs=182.4

Q ss_pred             HHhhccCCh--hHHHHHHHHHHHHHHH--HHhcCCCCCCCchhHHHHHHHHHHHhhHHHHHHhhcCCchhHHHHHhhcch
Q 019428           37 ASARLQFSY--GWYFTFIQGFVYLVLI--YLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKV  112 (341)
Q Consensus        37 i~~~~~F~~--~~~lt~~q~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sl~~is~~~~~l~ks~~p  112 (341)
                      -+.|.-||.  +...|..+.....+..  ..|-++.+..+.+|+..+..+.....++.+-+.|++.++.+.+.-+-.+.|
T Consensus        29 s~Ak~LFP~vG~~g~t~lRl~~aaLIll~l~RPwr~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF~GP  108 (292)
T COG5006          29 SFAKSLFPLVGAAGVTALRLAIAALILLALFRPWRRRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEFTGP  108 (292)
T ss_pred             HHHHHHccccChhhHHHHHHHHHHHHHHHHhhHHHhccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccH
Confidence            566666763  4577777755544322  234344333456777777888888899999999999999999999999999


Q ss_pred             HHHHHHHHhhcccccccChhHHHHHHHHHHHHHHHhccCCCCCCCchHHHHHHHHHHHHHHHhHHHHHHHHhhhCCCCCh
Q 019428          113 LPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQ  192 (341)
Q Consensus       113 v~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~~~~~~~~~~~~~~G~~l~l~a~~~~al~~v~~~~~~~~~~~~~~  192 (341)
                      +.+.+++      .||  .++.+.+.+.+.|+.+..-...+ ..+.|..|..+++.+..||+.|.+..||.-+..+   .
T Consensus       109 L~vA~~~------sRr--~~d~vwvaLAvlGi~lL~p~~~~-~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~---g  176 (292)
T COG5006         109 LAVALLS------SRR--LRDFVWVALAVLGIWLLLPLGQS-VWSLDPVGVALALGAGACWALYIVLGQRAGRAEH---G  176 (292)
T ss_pred             HHHHHHh------ccc--hhhHHHHHHHHHHHHhheeccCC-cCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCC---C
Confidence            9877642      333  34566777888888877643322 2356899999999999999999999888764221   1


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHH-HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 019428          193 MEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVY-GVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVT  271 (341)
Q Consensus       193 ~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~-~~l~l~~~~~~l~~~~~~~~i~~~sa~t~si~~~l~~v~~  271 (341)
                      .+-+-....+++...+|+.....+ ..     ..+|... ..+......+++-|.+-...+++.++.+.++...++|.++
T Consensus       177 ~~g~a~gm~vAaviv~Pig~~~ag-~~-----l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~a  250 (292)
T COG5006         177 TAGVAVGMLVAALIVLPIGAAQAG-PA-----LFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALA  250 (292)
T ss_pred             chHHHHHHHHHHHHHhhhhhhhcc-hh-----hcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHH
Confidence            222333344555555554332211 00     1244433 2344455667778888999999999999999999999999


Q ss_pred             HHHHHHhhCCCcchhhhHHHHHHHHHHHHHhccCCCCc
Q 019428          272 LLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADDKP  309 (341)
Q Consensus       272 ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~~k~~~~  309 (341)
                      .+.|++++||.+|+.||.|+..++.+..-.++.-+|+.
T Consensus       251 Al~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~~~  288 (292)
T COG5006         251 ALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARKPA  288 (292)
T ss_pred             HHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCCCC
Confidence            99999999999999999999999999887776655544

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.39  E-value=1.8e-13  Score=120.77  Aligned_cols=214  Identities=11%  Similarity=0.109  Sum_probs=158.8

Q ss_pred             HHHHHhhHHHHHHhhcCCchhHHHHHhhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHHhccCC------CCC
Q 019428           82 SAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADA------QTS  155 (341)
Q Consensus        82 ~~~~~~~~~l~~~sl~~is~~~~~l~ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~~~~~------~~~  155 (341)
                      ++.-+.+..+.++|++|++.+-++++..++|++|.++++++  +||+++..+.++..+.+.||+++...+.      +..
T Consensus       104 g~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~--LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~  181 (346)
T KOG4510|consen  104 GFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAF--LKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGE  181 (346)
T ss_pred             hhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHH--HcCCCcHHHHHHHHHhhheEEEEecCCcccCCCcccc
Confidence            56667778899999999999999999999999999999999  9999999999999999999998764321      110


Q ss_pred             ----CCchHHHHHHHHHHHHHHHhHHHHHHHHhhhCCCCChHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHH
Q 019428          156 ----PNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVY  231 (341)
Q Consensus       156 ----~~~~~~G~~l~l~a~~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~  231 (341)
                          .+.+..|...++.+++..|-..+..+++-++.   +..-.+.|-..+++...++.+..-|+.    +.. ....-|
T Consensus       182 ~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~---h~~msvsyf~~i~lV~s~I~~~~ig~~----~lP-~cgkdr  253 (346)
T KOG4510|consen  182 DSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNA---HAIMSVSYFSLITLVVSLIGCASIGAV----QLP-HCGKDR  253 (346)
T ss_pred             ccccccccCCchHHHHHhHhhhhhHHHHHHHhhccc---cEEEEehHHHHHHHHHHHHHHhhccce----ecC-ccccce
Confidence                13456787888888777766666665553432   222223344555655555443333431    110 111112


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhccC
Q 019428          232 GVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPA  305 (341)
Q Consensus       232 ~~l~l~~~~~~l~~~~~~~~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~~k  305 (341)
                      ..++-.++.++++|++....+++=-|-..++..+..-+++.+..+++|||-+|++.|.|+++++.+..+....|
T Consensus       254 ~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~k  327 (346)
T KOG4510|consen  254 WLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKK  327 (346)
T ss_pred             EEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHH
Confidence            22333467779999999999999888889999999999999999999999999999999999999998876543

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=98.99  E-value=4.1e-09  Score=84.48  Aligned_cols=123  Identities=11%  Similarity=0.162  Sum_probs=92.0

Q ss_pred             HHHhHHHHHHHHhhhCCCCChHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchH-HHHHHHHHHHHHHHHHHHHHH
Q 019428          172 MDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLY-VYGVLVFEAMATFIGQVSVLS  250 (341)
Q Consensus       172 ~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~-~~~~l~l~~~~~~l~~~~~~~  250 (341)
                      ++|.+.+..|+..++   .++.+..++....+.+ .++.....+...    ....++. ....+....+++.+++.+++.
T Consensus         2 ~~a~~~~~~k~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (126)
T PF00892_consen    2 SWAIYSVFSKKLLKK---ISPLSITFWRFLIAGI-LLILLLILGRKP----FKNLSPRQWLWLLFLGLLGTALAYLLYFY   73 (126)
T ss_pred             eeeeHHHHHHHHhcc---CCHHHHHHHHHHHHHH-HHHHHHhhcccc----ccCCChhhhhhhhHhhccceehHHHHHHH
Confidence            577888888887765   4578888888777766 443333222111    0111222 223344444556888999999


Q ss_pred             HHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHh
Q 019428          251 LIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKL  302 (341)
Q Consensus       251 ~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~  302 (341)
                      ++++.++...++...++|+++.++++++++|++++.+++|+++++.|+.+.+
T Consensus        74 a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   74 ALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999998754

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.98  E-value=1.4e-09  Score=86.03  Aligned_cols=134  Identities=16%  Similarity=0.115  Sum_probs=102.9

Q ss_pred             HHHHHHHHHHHHhHHHHHHHHhhhCCCCChHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHHHHHHHHHH
Q 019428          163 VIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATF  242 (341)
Q Consensus       163 ~~l~l~a~~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~l~l~~~~~~  242 (341)
                      .++++++++++++..++.|.-.+.   .||.-.++--+.....++....+.+|......   ..++..|.++.++++.+.
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~~---vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~---~~~~k~~lflilSGla~g   78 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLEG---VDPDFATTIRTIVILIFLLIVLLVTGNWQAGG---EIGPKSWLFLILSGLAGG   78 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccc---cCccHHHHHHHHHHHHHHHHHHHhcCceeccc---ccCcceehhhhHHHHHHH
Confidence            468899999999999887665443   33443344444444444444445566532110   124556778888999999


Q ss_pred             HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHh
Q 019428          243 IGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKL  302 (341)
Q Consensus       243 l~~~~~~~~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~  302 (341)
                      ++-.++|.++++-.+....-+.-+.+++++++|+++++|++|..+++|+.++..|..+.+
T Consensus        79 lswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          79 LSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            999999999999999999999999999999999999999999999999999999987654

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.81  E-value=4.2e-07  Score=84.72  Aligned_cols=140  Identities=11%  Similarity=0.039  Sum_probs=105.7

Q ss_pred             chHHHHHHHHHHHHHHHhHHHHHHHHhhhCCCCChHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHHHHH
Q 019428          158 FSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFE  237 (341)
Q Consensus       158 ~~~~G~~l~l~a~~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~l~l~  237 (341)
                      ....|.++.++++++++...+..|.. .   +.++.+..++-..++.+.+.+.....++..+... ...++..+......
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~---~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~   79 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-Y---YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKT-LIQTPQKIFMLAVS   79 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-c---CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHH-HHcCHHHHHHHHHH
Confidence            35689999999999999999888543 2   2568899999888887766654433333211111 11122222223344


Q ss_pred             HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHh
Q 019428          238 AMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKL  302 (341)
Q Consensus       238 ~~~~~l~~~~~~~~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~  302 (341)
                      ++..+..+.+++++++++++..+++.....|+++.+++.++++|+++..+++|+++.+.|+.+..
T Consensus        80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            45555677889999999999999999999999999999999999999999999999999998754

>TIGR00688 rarD rarD protein

Probab=98.77  E-value=6.3e-07  Score=81.66  Aligned_cols=138  Identities=7%  Similarity=0.055  Sum_probs=102.5

Q ss_pred             HHHHHHHHHHHHHHhHHHHHHHHhhhCCCCChHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHh-hch-HHHHHHHHHH
Q 019428          161 IGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCS-QHL-YVYGVLVFEA  238 (341)
Q Consensus       161 ~G~~l~l~a~~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~-~~~-~~~~~l~l~~  238 (341)
                      .|..++++++++++...+..|. ..+   .++.+..++-..++.+.+.+.....++..+...... .+. ..+..+.+.+
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~~---~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   77 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LKP---LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCG   77 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hcc---CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHH
Confidence            3889999999999999998875 332   578999998888887766554333332111001111 011 1222344445


Q ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHh
Q 019428          239 MATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKL  302 (341)
Q Consensus       239 ~~~~l~~~~~~~~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~  302 (341)
                      +.....+.+++.+++++++.++++.....|+++.+++.++++|+++..+++|+.+.+.|+.+-.
T Consensus        78 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        78 LLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             HHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence            5556777889999999999999999999999999999999999999999999999999987553

This uncharacterized protein is predicted to have many membrane-spanning domains.

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=98.63  E-value=1.4e-07  Score=80.43  Aligned_cols=217  Identities=15%  Similarity=0.199  Sum_probs=149.8

Q ss_pred             HHHHHHHHHhhHHHHHHhhcCCchhHHHHHhhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHHhccCCCCCCC
Q 019428           78 YVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPN  157 (341)
Q Consensus        78 ~~~~~~~~~~~~~l~~~sl~~is~~~~~l~ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~~~~~~~~~~  157 (341)
                      -.|.+++..+...+-..+++.++.+-++-+.+|.-.|+.+++++.  +++|+...++++.++++.|+++.++.|.+.  .
T Consensus        56 taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IV--L~D~~~~~kIlaailAI~GiVmiay~DN~~--a  131 (290)
T KOG4314|consen   56 TAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIV--LGDRFMGFKILAAILAIGGIVMIAYADNEH--A  131 (290)
T ss_pred             ecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHH--hccchhhhhHHHHHHHhCcEEEEEeccchh--h
Confidence            345566677777888889999999999999999999999999999  999999999999999999999999887542  4


Q ss_pred             chHHHHHHHHHHHHHHHhHHHHHHHHhhhC--CCCChH-HHHHHHHH--HHHHHHHHHHhhcchHHHHHHHHhhchHHHH
Q 019428          158 FSMIGVIMISGALIMDSFLGNLQEAIFTMN--PETTQM-EMLFCSTV--VGLPMLIPPMLLTGELFKAWNSCSQHLYVYG  232 (341)
Q Consensus       158 ~~~~G~~l~l~a~~~~al~~v~~~~~~~~~--~~~~~~-~~~~~~~~--~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~  232 (341)
                      ..+.|+.+++.|+.+.|+|-+..|+....-  ++...+ .-+-+.++  .+.|-+  .+.++|  .+.++.....|  |.
T Consensus       132 ~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~l--IL~~T~--VE~~qsFA~~P--WG  205 (290)
T KOG4314|consen  132 DEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPAL--ILAFTG--VEHLQSFAAAP--WG  205 (290)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHH--HHHHhc--hHHHHHHhhCC--ch
Confidence            579999999999999999999998876532  111111 11112222  122211  122344  22232111122  33


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhcc
Q 019428          233 VLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLP  304 (341)
Q Consensus       233 ~l~l~~~~~~l~~~~~~~~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~~  304 (341)
                      .+......+...+...+..+..+.|...++-..........+..++-+-.++.....|.+++..|.++....
T Consensus       206 ~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP  277 (290)
T KOG4314|consen  206 CLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIP  277 (290)
T ss_pred             hhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheecc
Confidence            332222222233455667788888888777666655566667766666678889999999999998876543

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.62  E-value=6.2e-06  Score=74.95  Aligned_cols=206  Identities=14%  Similarity=0.135  Sum_probs=141.0

Q ss_pred             HHHHHHHHhhHHHHHHhhcCCchhHHH-HHhhcchHHHHHHHHhhcccccccChhHH----HHHHHHHHHHHHHhccCCC
Q 019428           79 VKLSAVLMGSHGLTKGSLAFLNYPAQL-MFKSTKVLPVMVMGAFIPGLRRKYPAHEY----VSALLLVVGLILFTLADAQ  153 (341)
Q Consensus        79 ~~~~~~~~~~~~l~~~sl~~is~~~~~-l~ks~~pv~v~ll~~l~~~~~~k~s~~~~----~~l~l~~~Gv~l~~~~~~~  153 (341)
                      +.-+++.......++.|++++.+|... +......+.+.+.++++  |+|-.+..++    ++++++++|+.+.++.|.+
T Consensus        49 ~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~--fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~  126 (269)
T PF06800_consen   49 FLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLF--FGEWTTTTQKIIGFLALVLIIIGVILTSYQDKK  126 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhh--cCCCCCcchHHHHHHHHHHHHHHHHHhcccccc
Confidence            344667788889999999997765443 22234556678899999  8998887775    5899999999999998875


Q ss_pred             CCC----CchHHHHHHHHHHHHHHHhHHHHHHHHhhhCCCCChHHHHHHHHHHHHHHHHH-HHhhcchHHHHHHHHhhch
Q 019428          154 TSP----NFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIP-PMLLTGELFKAWNSCSQHL  228 (341)
Q Consensus       154 ~~~----~~~~~G~~l~l~a~~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~~~~~~~~~~~~~  228 (341)
                      .+.    ++...|+..++.+.+.+..|.+..+-     .+.++++..+-.++ +...... .....++     .  ..+.
T Consensus       127 ~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~-----~~~~~~~~~lPqai-Gm~i~a~i~~~~~~~-----~--~~~k  193 (269)
T PF06800_consen  127 SDKSSSKSNMKKGILALLISTIGYWIYSVIPKA-----FHVSGWSAFLPQAI-GMLIGAFIFNLFSKK-----P--FFEK  193 (269)
T ss_pred             ccccccccchhhHHHHHHHHHHHHHHHHHHHHh-----cCCChhHhHHHHHH-HHHHHHHHHhhcccc-----c--cccc
Confidence            432    24567999999999999998877543     12455554443222 2211111 1111111     0  0111


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchh----hhHHHHHHHHHHHH
Q 019428          229 YVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQ----HGTGLLLIAMGITL  300 (341)
Q Consensus       229 ~~~~~l~l~~~~~~l~~~~~~~~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~----~~iG~~lil~Gv~~  300 (341)
                      ..|.-+ +.++.=.+++.+++...++.|..+.=..+.+..+++.+.|++++||+=+.+    .++|.++++.|..+
T Consensus       194 ~~~~ni-l~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  194 KSWKNI-LTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             chHHhh-HHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence            223223 234444688899999999999999999999999999999999999976654    56788888887653

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.59  E-value=8.5e-07  Score=82.65  Aligned_cols=216  Identities=13%  Similarity=0.154  Sum_probs=122.8

Q ss_pred             HHHHH-HHHhhHHHHHHhhcCCchhHHHHHhhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHHhccCCCCCCC
Q 019428           79 VKLSA-VLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPN  157 (341)
Q Consensus        79 ~~~~~-~~~~~~~l~~~sl~~is~~~~~l~ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~~~~~~~~~~  157 (341)
                      +..|+ ++..+..++..|+.+.+.+..+-+-+...++.++++..+  +|||.+++++.+..+++.|..++....++.+..
T Consensus        53 W~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~--l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~  130 (300)
T PF05653_consen   53 WWIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFF--LGEKLTRRDIVGCALIILGSVLIVIFAPKEEPI  130 (300)
T ss_pred             HHHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHH--hcccchHhHHhhHHHHHhhheeeEEeCCCCCCc
Confidence            34454 357777899999999999999988999999999999999  999999999999999999998776544332211


Q ss_pred             ch------------HHHHHHHHHHHHHHHhHHHHHHHHhhhCCCCChHHHHHHHH---HHHHHHHHHHHhhcchHHHHH-
Q 019428          158 FS------------MIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCST---VVGLPMLIPPMLLTGELFKAW-  221 (341)
Q Consensus       158 ~~------------~~G~~l~l~a~~~~al~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~g~~~~~~-  221 (341)
                      .+            ..-+........ -.+.....    +++++.+   .+.|..   .++....+..=.+..-+.+.. 
T Consensus       131 ~t~~~l~~~~~~~~fl~y~~~~~~~~-~~L~~~~~----~r~g~~~---i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~  202 (300)
T PF05653_consen  131 HTLDELIALLSQPGFLVYFILVLVLI-LILIFFIK----PRYGRRN---ILVYISICSLIGSFTVLSAKAISILIKLTFS  202 (300)
T ss_pred             CCHHHHHHHhcCcceehhHHHHHHHH-HHHHHhhc----chhcccc---eEEEEEEeccccchhhhHHHHHHHHHHHHhc
Confidence            11            111111111111 11111111    1211111   111211   222111100000000000000 


Q ss_pred             -HHHhhchHHHHHHHHHHHHHHHHH-HHHHHHHHHhhHHHHH-HHHHHHHHHHHHHHHHhhCC--Ccch----hhhHHHH
Q 019428          222 -NSCSQHLYVYGVLVFEAMATFIGQ-VSVLSLIALFGAATTA-MVTTARKAVTLLLSYLIFTK--PLTE----QHGTGLL  292 (341)
Q Consensus       222 -~~~~~~~~~~~~l~l~~~~~~l~~-~~~~~~i~~~sa~t~s-i~~~l~~v~~ills~~~f~e--~~t~----~~~iG~~  292 (341)
                       +....+|..|..++.. +.+.+.| .+.+.++++++++... +....-...+++-|.++|+|  ..++    ....|..
T Consensus       203 g~~~f~~~~~y~l~~~~-v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~  281 (300)
T PF05653_consen  203 GDNQFTYPLTYLLLLVL-VVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFL  281 (300)
T ss_pred             CchhhhhhHHHHHHHHH-HHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHH
Confidence             0011244455444433 3345556 4568999999987533 33334556888899999996  5566    4567788


Q ss_pred             HHHHHHHHHhccC
Q 019428          293 LIAMGITLKLLPA  305 (341)
Q Consensus       293 lil~Gv~~y~~~k  305 (341)
                      +++.|+.+-+..|
T Consensus       282 ~ii~GV~lL~~~~  294 (300)
T PF05653_consen  282 IIIIGVFLLSSSK  294 (300)
T ss_pred             HHHHhhheeeccC
Confidence            8888887765433

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.59  E-value=3.1e-07  Score=73.07  Aligned_cols=78  Identities=14%  Similarity=0.230  Sum_probs=67.2

Q ss_pred             chhHHHHHHHHHH-HhhHHHHHHhhcCCchhHHHHHhhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHHhccC
Q 019428           73 NPWKTYVKLSAVL-MGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLAD  151 (341)
Q Consensus        73 ~~~~~~~~~~~~~-~~~~~l~~~sl~~is~~~~~l~ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~~~~  151 (341)
                      .++......+++. ..+..+.+.|+++.+ +....+.++.|++++++++++  +|||++++++.+++++++|++++.++|
T Consensus        32 ~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~--~~er~~~~~~~a~~l~~~Gv~li~~~~  108 (113)
T PF13536_consen   32 KPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLF--FKERLSPRRWLAILLILIGVILIAWSD  108 (113)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence            4455455556655 488899999999999 577799999999999999999  999999999999999999999999887


Q ss_pred             CC
Q 019428          152 AQ  153 (341)
Q Consensus       152 ~~  153 (341)
                      .+
T Consensus       109 ~~  110 (113)
T PF13536_consen  109 LT  110 (113)
T ss_pred             cc
Confidence            54

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.51  E-value=2.4e-06  Score=78.97  Aligned_cols=133  Identities=12%  Similarity=0.142  Sum_probs=94.0

Q ss_pred             HHHHHHHHHHHHhHHHHHHHHhhhCCCCChHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHHHHHHHHHH
Q 019428          163 VIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATF  242 (341)
Q Consensus       163 ~~l~l~a~~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~l~l~~~~~~  242 (341)
                      +.+.+++++++|...+..|+..++.   ++.  .++....+.+.+.|....... ...+.  ......+..+...++...
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~---~~~--~~~~~~~~~~~l~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~   74 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKE---PDF--LWWALLAHSVLLTPYGLWYLA-QVGWS--RLPATFWLLLAISAVANM   74 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCch---hHH--HHHHHHHHHHHHHHHHHHhcc-cCCCC--CcchhhHHHHHHHHHHHH
Confidence            4577889999999999988765442   233  344444455555543322110 00000  011223444555566667


Q ss_pred             HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhc
Q 019428          243 IGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLL  303 (341)
Q Consensus       243 l~~~~~~~~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~  303 (341)
                      ..+.+.+.+.++.++...+++....|+++.+++.++++|+++..+++|+.+++.|+.+-..
T Consensus        75 ~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~  135 (281)
T TIGR03340        75 VYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL  135 (281)
T ss_pred             HHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence            7778889999999999999999999999999999999999999999999999999987654

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.45  E-value=1.4e-05  Score=65.02  Aligned_cols=121  Identities=13%  Similarity=0.144  Sum_probs=85.2

Q ss_pred             HHHHHHHHHHHHHHhHHHHHHHHhhhCCCCChHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHHHHHHHH
Q 019428          161 IGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMA  240 (341)
Q Consensus       161 ~G~~l~l~a~~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~l~l~~~~  240 (341)
                      .|+++++.+.++.+...+..|+-.++.++.+..   .. ..   ..+    .           ...+|..  .+++..++
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~---~~-~~---~~~----~-----------~~~~p~~--~i~lgl~~   57 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHA---WD-FI---AAL----L-----------AFGLALR--AVLLGLAG   57 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccch---hH-HH---HHH----H-----------HHhccHH--HHHHHHHH
Confidence            378889999998888888877655443321110   00 00   000    0           0012211  24455577


Q ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH--hhCCCcchhhhHHHHHHHHHHHHHhccC
Q 019428          241 TFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYL--IFTKPLTEQHGTGLLLIAMGITLKLLPA  305 (341)
Q Consensus       241 ~~l~~~~~~~~i~~~sa~t~si~~~l~~v~~ills~~--~f~e~~t~~~~iG~~lil~Gv~~y~~~k  305 (341)
                      ..+++.+|..++++.+...+..+..+..+...+.++.  +|||++|+.+++|+++++.|+.+.+..+
T Consensus        58 ~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~  124 (129)
T PRK02971         58 YALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT  124 (129)
T ss_pred             HHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence            7888999999999999999988888888778777775  8999999999999999999999987533

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=98.43  E-value=1.7e-06  Score=69.12  Aligned_cols=102  Identities=13%  Similarity=0.190  Sum_probs=77.6

Q ss_pred             hhHHHHHHHHHHHHHHHH---HhcCC--CCCCCchhHHHHHHHHH-HHhhHHHHHHhhcCCchhHHHHHhhcchHHHHHH
Q 019428           45 YGWYFTFIQGFVYLVLIY---LQGFT--TKQMMNPWKTYVKLSAV-LMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVM  118 (341)
Q Consensus        45 ~~~~lt~~q~~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~l~~~sl~~is~~~~~l~ks~~pv~v~ll  118 (341)
                      .|...++.++.....+..   ....+  .......+......+++ ...+..+.+.++++++.+..+++..+.|+++.++
T Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~   97 (126)
T PF00892_consen   18 SPLSITFWRFLIAGILLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISASIVSILQYLSPVFAAIL   97 (126)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcchhHHHHHHHHHHHHHHHH
Confidence            456777888777553111   11111  11122334445556666 4788899999999999999999999999999999


Q ss_pred             HHhhcccccccChhHHHHHHHHHHHHHHHh
Q 019428          119 GAFIPGLRRKYPAHEYVSALLLVVGLILFT  148 (341)
Q Consensus       119 ~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~  148 (341)
                      ++++  +||+++++++++++++++|++++.
T Consensus        98 ~~~~--~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   98 GWLF--LGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHH--cCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999  999999999999999999999864

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.42  E-value=1.3e-05  Score=63.73  Aligned_cols=102  Identities=19%  Similarity=0.303  Sum_probs=71.8

Q ss_pred             HHHHHHHHHhhcchHHHHHHHHhhchHHHHHHHHHHHHH-HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCC
Q 019428          203 GLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMAT-FIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTK  281 (341)
Q Consensus       203 ~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~l~l~~~~~-~l~~~~~~~~i~~~sa~t~si~~~l~~v~~ills~~~f~e  281 (341)
                      +.+.+.......++..+.......++..+  ++..++.. ..++..+++++++.++ ..+++..+.|+++.++|.++|+|
T Consensus         8 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~e   84 (113)
T PF13536_consen    8 SVLFLLIILLIRGRLRDLFRALRRKPWLW--LILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKE   84 (113)
T ss_pred             HHHHHHHHHHHHccHHHHHHHHHhCcHHH--HHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcC
Confidence            34444443344454433333233333332  22323333 3677888999999996 77799999999999999999999


Q ss_pred             CcchhhhHHHHHHHHHHHHHhccCCC
Q 019428          282 PLTEQHGTGLLLIAMGITLKLLPADD  307 (341)
Q Consensus       282 ~~t~~~~iG~~lil~Gv~~y~~~k~~  307 (341)
                      +++..+++|+++++.|+.+-.+...+
T Consensus        85 r~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   85 RLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             CCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            99999999999999999988775543

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.27  E-value=3.7e-05  Score=73.59  Aligned_cols=136  Identities=10%  Similarity=0.118  Sum_probs=95.2

Q ss_pred             HHHHHHHHHHHhHHHHHHHHhhhCCCCChHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHHHHHHHHHHH
Q 019428          164 IMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFI  243 (341)
Q Consensus       164 ~l~l~a~~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~l~l~~~~~~l  243 (341)
                      +.+++--++++...++.|..++..  .++....+|-..++.+.+++.....+.. +...  ..+...+..+.+.++.+++
T Consensus        16 ~~~~~~q~~~~~~~~~~k~a~~~G--~~~~~~~~~R~~iA~l~Ll~~~~~~~~~-~~~~--~~~~~~~~~l~l~g~~g~~   90 (358)
T PLN00411         16 TAMLATETSVVGISTLFKVATSKG--LNIYPFLGYSYLLASLLLLPSLFFTNRS-RSLP--PLSVSILSKIGLLGFLGSM   90 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCC--CCccHHHHHHHHHHHHHHHHHHHHHHHh-cccC--cchHHHHHHHHHHHHHHHH
Confidence            444555667777788888777543  5677777877777776666654322110 0000  0011223333334444445


Q ss_pred             HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHh------hCCCcchhhhHHHHHHHHHHHHHhcc
Q 019428          244 GQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLI------FTKPLTEQHGTGLLLIAMGITLKLLP  304 (341)
Q Consensus       244 ~~~~~~~~i~~~sa~t~si~~~l~~v~~ills~~~------f~e~~t~~~~iG~~lil~Gv~~y~~~  304 (341)
                      .+.+++..+++++|..++++.++.|+++.+++.++      ++|+++..+++|+++.+.|+.+-...
T Consensus        91 ~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~  157 (358)
T PLN00411         91 YVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFY  157 (358)
T ss_pred             HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHc
Confidence            56678999999999999999999999999999999      69999999999999999999876643

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.27  E-value=5.8e-06  Score=65.79  Aligned_cols=125  Identities=18%  Similarity=0.193  Sum_probs=92.1

Q ss_pred             hhHHHHHHHHHHHHHHHhhccCC--hhHHHHHHHHHHHHHHHH--H--hc-CCCCC-CCchhHHHHHH-HHHHHhhHHHH
Q 019428           22 FSFALLGSSLVISSMASARLQFS--YGWYFTFIQGFVYLVLIY--L--QG-FTTKQ-MMNPWKTYVKL-SAVLMGSHGLT   92 (341)
Q Consensus        22 ~~~~~~~~~~~~~~~i~~~~~F~--~~~~lt~~q~~~~~~~~~--~--~~-~~~~~-~~~~~~~~~~~-~~~~~~~~~l~   92 (341)
                      ..|++++....++-++|.|.+-+  .|.+-|.++..+...+..  +  .+ +.... ...+-+.++.+ ++.-..+..+-
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Y   84 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLY   84 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHH
Confidence            56888888888888999998654  677888888776443222  1  22 21110 11122334444 44567888899


Q ss_pred             HHhhcCCchhHHHHHhhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHHh
Q 019428           93 KGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFT  148 (341)
Q Consensus        93 ~~sl~~is~~~~~l~ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~  148 (341)
                      +.+++.=.+|-..-+..++|+++.++++++  +|||++.++++++.++++|+++++
T Consensus        85 f~ALk~G~as~VvPldk~svvl~~lls~lf--L~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          85 FRALKKGKASRVVPLDKTSVVLAVLLSILF--LGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHhcCCcceEEEcccccHHHHHHHHHHH--hcCCCCHHHHHHHHHHHhCeeeEe
Confidence            999999777777777888999999999999  999999999999999999998765

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.19  E-value=3.6e-05  Score=69.94  Aligned_cols=117  Identities=15%  Similarity=0.052  Sum_probs=83.9

Q ss_pred             hHHHHHHHHhhhCCCCChHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019428          175 FLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIAL  254 (341)
Q Consensus       175 l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~l~l~~~~~~l~~~~~~~~i~~  254 (341)
                      ...+..|...+..  .++.+..++-...+.+++.+.....   .       ...+....+..+.++..+.+.+++.++++
T Consensus         3 ~~~~~~k~~~~~~--~~~~~~~~~r~~~~~l~l~~~~~~~---~-------~~~~~~~~~~~~~~~~~l~~~~~~~a~~~   70 (260)
T TIGR00950         3 TTGVVIGQYLEGQ--VPLYFAVFRRLIFALLLLLPLLRRR---P-------PLKRLLRLLLLGALQIGVFYVLYFVAVKR   70 (260)
T ss_pred             chHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHHHhc---c-------CHhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            3344555544432  4567777776666666555432211   0       01112233444455556777888999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhc
Q 019428          255 FGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLL  303 (341)
Q Consensus       255 ~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~  303 (341)
                      +++...+++..+.|+++.+++.++++|++++.+++|+++.+.|+.+...
T Consensus        71 ~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~  119 (260)
T TIGR00950        71 LPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLS  119 (260)
T ss_pred             cChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhcc
Confidence            9999999999999999999999999999999999999999999988753

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.17  E-value=8.4e-05  Score=67.49  Aligned_cols=142  Identities=13%  Similarity=0.087  Sum_probs=107.1

Q ss_pred             hHHHHHHHHHHHHHHHhHHHHHHHHhhhCCCCChHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHHHHHH
Q 019428          159 SMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEA  238 (341)
Q Consensus       159 ~~~G~~l~l~a~~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~l~l~~  238 (341)
                      ...|+++.+.|-+.+|+.-.+.|-+ +.   .++.|...+-.+++.|+++......+...+..+ ..++|..+..+.+.+
T Consensus         5 ~~~Gil~~l~Ay~lwG~lp~y~kll-~~---~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~-~~~~p~~~~~~~l~a   79 (293)
T COG2962           5 SRKGILLALLAYLLWGLLPLYFKLL-EP---LPATEILAHRVIWSFPFMLALLFLLRQWRELKQ-LLKQPKTLLMLALTA   79 (293)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHH-cc---CCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH-HHhCcHHHHHHHHHH
Confidence            4569999999999999988887543 32   457888888888898888765554444333333 345666554444433


Q ss_pred             HHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhccCC
Q 019428          239 MATFIGQV-SVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPAD  306 (341)
Q Consensus       239 ~~~~l~~~-~~~~~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~~k~  306 (341)
                      .. ...|. .+-++..+-....+|.--.++|.+.+++|.++++|+++..|++...+..+||....+...
T Consensus        80 ~l-i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g  147 (293)
T COG2962          80 LL-IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLG  147 (293)
T ss_pred             HH-HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcC
Confidence            33 23344 445888888999999999999999999999999999999999999999999988776543

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.04  E-value=3.7e-05  Score=60.96  Aligned_cols=65  Identities=11%  Similarity=0.043  Sum_probs=59.7

Q ss_pred             HHHHhhHHHHHHhhcCCchhHHHHHhhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHHhc
Q 019428           83 AVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTL  149 (341)
Q Consensus        83 ~~~~~~~~l~~~sl~~is~~~~~l~ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~~  149 (341)
                      +++..+..+...+++.++.+.+..+-+..++++++.++++  +|||++++|++++.++++|++++..
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~--f~E~ls~~~~~Gi~lii~Gv~~i~~  109 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKL--WHEPVSPRHWCGVAFIIGGIVILGS  109 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            4478888999999999999999888889999999999999  9999999999999999999998753

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=97.89  E-value=0.00053  Score=63.76  Aligned_cols=128  Identities=16%  Similarity=0.055  Sum_probs=88.3

Q ss_pred             HHHHHHHHHHhHHHHHHHHhhhCCCCChHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHH-HHHHHHHHHHH
Q 019428          165 MISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYG-VLVFEAMATFI  243 (341)
Q Consensus       165 l~l~a~~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~-~l~l~~~~~~l  243 (341)
                      ..++-.+.||...+..|....   +.+|.+..++-..++.+.+++.....+.-..       ....+. .+..+.+....
T Consensus        12 ~~~~~~~iWg~~~~~~K~~~~---~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~-------~~~~~~~~~~~g~~~~~~   81 (292)
T PRK11272         12 ALFALYIIWGSTYLVIRIGVE---SWPPLMMAGVRFLIAGILLLAFLLLRGHPLP-------TLRQWLNAALIGLLLLAV   81 (292)
T ss_pred             HHHHHHHHHhhHHHHHHHHhc---cCCHHHHHHHHHHHHHHHHHHHHHHhCCCCC-------cHHHHHHHHHHHHHHHHH
Confidence            345566788888888765543   2578888888777777666654333221000       111122 22222233234


Q ss_pred             HHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhc
Q 019428          244 GQVSVLSLI-ALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLL  303 (341)
Q Consensus       244 ~~~~~~~~i-~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~  303 (341)
                      .+.+++... +++++..+++...+.|+++.+++.+ ++|+++..+++|+.+.+.|+.+-..
T Consensus        82 ~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~  141 (292)
T PRK11272         82 GNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNS  141 (292)
T ss_pred             HHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhc
Confidence            556667777 8899999999999999999999975 7999999999999999999987654

>PRK11689 aromatic amino acid exporter; Provisional

Probab=97.87  E-value=0.00047  Score=64.18  Aligned_cols=130  Identities=15%  Similarity=0.055  Sum_probs=87.6

Q ss_pred             HHHHHHHHHHHHHHhHHHHHHHHhhhCCCCChHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHHHHHHHH
Q 019428          161 IGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMA  240 (341)
Q Consensus       161 ~G~~l~l~a~~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~l~l~~~~  240 (341)
                      .+++++++++++|+......|...+.   .+|..+..+-...+.+++++..   . ..+ .   ...+  +..+...++.
T Consensus         4 ~~~l~~l~a~~~Wg~~~~~~k~~~~~---~~P~~~~~~R~~~a~l~l~~~~---~-~~~-~---~~~~--~~~~~~~~l~   70 (295)
T PRK11689          4 KATLIGLIAILLWSTMVGLIRGVSES---LGPVGGAAMIYSVSGLLLLLTV---G-FPR-L---RQFP--KRYLLAGGLL   70 (295)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHcc---CChHHHHHHHHHHHHHHHHHHc---c-ccc-c---cccc--HHHHHHHhHH
Confidence            35678889999999998888765544   4677777666655655554321   1 111 0   1111  1122233333


Q ss_pred             HHHHHHHHHHHHH----HhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhc
Q 019428          241 TFIGQVSVLSLIA----LFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLL  303 (341)
Q Consensus       241 ~~l~~~~~~~~i~----~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~  303 (341)
                      ....+.+.+..++    ..++..++++..+.|+++.+++.++++|+++..+++|+++.+.|+.+-..
T Consensus        71 ~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~  137 (295)
T PRK11689         71 FVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLG  137 (295)
T ss_pred             HHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheec
Confidence            2233344555554    45777888999999999999999999999999999999999999987654

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=97.84  E-value=0.0006  Score=63.61  Aligned_cols=123  Identities=15%  Similarity=0.139  Sum_probs=82.9

Q ss_pred             HHhHHHHHHHHhhhCCCCChHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHH
Q 019428          173 DSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLI  252 (341)
Q Consensus       173 ~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~l~l~~~~~~l~~~~~~~~i  252 (341)
                      ....++++|..+++.  ..|..+.+.....+.....+. ...+.. +..   ..+...+..+...+++.++.+.+.+.++
T Consensus        14 ~~~~~~~NK~~l~~~--~~P~~~~~~~~~~~~~~~~~~-~~~~~~-~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~l   86 (302)
T TIGR00817        14 NVYFNIYNKKLLNVF--PYPYFKTLISLAVGSLYCLLS-WSSGLP-KRL---KISSALLKLLLPVAIVHTIGHVTSNVSL   86 (302)
T ss_pred             HHHHHHHHHHHHhhC--ChhHHHHHHHHHHHHHHHHHH-HHhCCC-CCC---CCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            334456777777653  246666666555554433222 111100 000   0011223334444555566677889999


Q ss_pred             HHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHh
Q 019428          253 ALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKL  302 (341)
Q Consensus       253 ~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~  302 (341)
                      +++++..++++..+.|+++.+++.++++|+++..+++|.++++.|+.+..
T Consensus        87 ~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~  136 (302)
T TIGR00817        87 SKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS  136 (302)
T ss_pred             HhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc
Confidence            99999999999999999999999999999999999999999999997653

specificities overlap.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.80  E-value=0.0003  Score=55.73  Aligned_cols=63  Identities=14%  Similarity=0.128  Sum_probs=55.9

Q ss_pred             HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHh
Q 019428          240 ATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKL  302 (341)
Q Consensus       240 ~~~l~~~~~~~~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~  302 (341)
                      +..+++.++..++++.+...+...-.+.++.+.++|+++|||++|+.+++|+++++.|+.+-.
T Consensus        46 ~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         46 CLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            334567788899999999888888889999999999999999999999999999999998754

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=97.80  E-value=0.0011  Score=61.95  Aligned_cols=124  Identities=12%  Similarity=0.075  Sum_probs=85.2

Q ss_pred             HHHHHHHHHHHhHHHHHHHHhhhCCCCChHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHHHHHHHHHHH
Q 019428          164 IMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFI  243 (341)
Q Consensus       164 ~l~l~a~~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~l~l~~~~~~l  243 (341)
                      ++.++++++|+...+..|...++   .+|.+..++-..++.+.+++.....+           .+  +..+...++....
T Consensus         7 l~~l~~~~~Wg~~~~~~k~~~~~---~~p~~~~~~R~~~a~~~l~~~~~~~~-----------~~--~~~~~~~g~~~~~   70 (299)
T PRK11453          7 VLALLVVVVWGLNFVVIKVGLHN---MPPLMLAGLRFMLVAFPAIFFVARPK-----------VP--LNLLLGYGLTISF   70 (299)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHhc---CCHHHHHHHHHHHHHHHHHHHhcCCC-----------Cc--hHHHHHHHHHHHH
Confidence            45778889999999888765543   56888877766655444333211100           01  1112222222222


Q ss_pred             HH-HHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhc
Q 019428          244 GQ-VSVLSLIAL-FGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLL  303 (341)
Q Consensus       244 ~~-~~~~~~i~~-~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~  303 (341)
                      .+ .+++..+++ .++..++++..+.|+++.+++.++++|+++..+++|.++.+.|+.+-..
T Consensus        71 ~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~  132 (299)
T PRK11453         71 GQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIE  132 (299)
T ss_pred             HHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhcc
Confidence            33 455677777 5778889899999999999999999999999999999999999987654

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=97.79  E-value=0.00076  Score=64.46  Aligned_cols=139  Identities=15%  Similarity=0.088  Sum_probs=91.4

Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHhhhCCCCChHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHHHHHHH
Q 019428          160 MIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAM  239 (341)
Q Consensus       160 ~~G~~l~l~a~~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~l~l~~~  239 (341)
                      +.-..+.+.--.+...+++.+|.+++..+  -|+.+..+...++..+..+. +..+ ..+..+. ......+..++..++
T Consensus        48 ~~~~~~~~~wy~~s~~~~~~nK~vl~~~~--~P~~l~~~~~~~~~l~~~~~-~~~~-~~~~~~~-~~~~~~~~~llp~gl  122 (350)
T PTZ00343         48 WKLALLFLTWYALNVLYVVDNKLALNMLP--LPWTISSLQLFVGWLFALLY-WATG-FRKIPRI-KSLKLFLKNFLPQGL  122 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCC--hhHHHHHHHHHHHHHHHHHH-HHhC-CCCCCCC-CCHHHHHHHHHHHHH
Confidence            33334444444555666777887776532  26777766666554443322 1111 1000000 001112333444456


Q ss_pred             HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhc
Q 019428          240 ATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLL  303 (341)
Q Consensus       240 ~~~l~~~~~~~~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~  303 (341)
                      ++..++...+.+++++++..++++..+.|+++.+++.++++|+++..+++|++++++|+.+-..
T Consensus       123 ~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~  186 (350)
T PTZ00343        123 CHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASV  186 (350)
T ss_pred             HHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheec
Confidence            5566666677899999999999999999999999999999999999999999999999997653

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.71  E-value=0.0011  Score=62.06  Aligned_cols=128  Identities=16%  Similarity=0.172  Sum_probs=86.2

Q ss_pred             HHHHHHHHhhhCCCC-ChHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019428          176 LGNLQEAIFTMNPET-TQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIAL  254 (341)
Q Consensus       176 ~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~l~l~~~~~~l~~~~~~~~i~~  254 (341)
                      +.+.||++.++.... .+.-+++.+.........+.....+.     ......| ...+. ..+++..++..+.+.++++
T Consensus        15 ~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~-----~~~~~~~-~~~~~-~~~~~~~~~~~~~~~al~~   87 (303)
T PF08449_consen   15 YGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKF-----PKSRKIP-LKKYA-ILSFLFFLASVLSNAALKY   87 (303)
T ss_pred             HHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccc-----cCCCcCh-HHHHH-HHHHHHHHHHHHHHHHHHh
Confidence            457889988765433 24444444444333333322222220     0000111 12222 2245556777888899999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhccCCCCcc
Q 019428          255 FGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADDKPI  310 (341)
Q Consensus       255 ~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~~k~~~~~  310 (341)
                      .+-.+..+.-..+++.+++++.++++++.+..++++.+++.+|+.+....+.+.++
T Consensus        88 i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~  143 (303)
T PF08449_consen   88 ISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSS  143 (303)
T ss_pred             CChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccc
Confidence            99999999999999999999999999999999999999999999999887655443

; GO: 0055085 transmembrane transport

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=97.68  E-value=0.0016  Score=60.64  Aligned_cols=129  Identities=11%  Similarity=0.034  Sum_probs=86.7

Q ss_pred             CchhHHHHHHHHHHHHHHHhhc-cCC-hhHHHHHHHHHHHHH-HHHHhcCCCCCCCchhHH---HHHHHHH-HHhhHHHH
Q 019428           20 NNFSFALLGSSLVISSMASARL-QFS-YGWYFTFIQGFVYLV-LIYLQGFTTKQMMNPWKT---YVKLSAV-LMGSHGLT   92 (341)
Q Consensus        20 ~~~~~~~~~~~~~~~~~i~~~~-~F~-~~~~lt~~q~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~l~   92 (341)
                      .+..+.+++...+..+.+..|. .-+ .+...+ .+.+...+ +.............++..   .+.++++ ..+...+.
T Consensus       148 ~G~ll~l~aa~~~a~~~v~~r~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~lgv~~t~~~~~l~  226 (293)
T PRK10532        148 TGAALALGAGACWAIYILSGQRAGAEHGPATVA-IGSLIAALIFVPIGALQAGEALWHWSILPLGLAVAILSTALPYSLE  226 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhccCCchHHH-HHHHHHHHHHHHHHHHccCcccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            3677888888888887765543 212 233443 34343332 211111111111111221   2344444 45777889


Q ss_pred             HHhhcCCchhHHHHHhhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHHhccC
Q 019428           93 KGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLAD  151 (341)
Q Consensus        93 ~~sl~~is~~~~~l~ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~~~~  151 (341)
                      +.++++++.+...++....|++..++++++  ++|+++..++++..+++.|++......
T Consensus       227 ~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~--lgE~~~~~~~iG~~lIl~~~~~~~~~~  283 (293)
T PRK10532        227 MIALTRLPTRTFGTLMSMEPALAAVSGMIF--LGETLTLIQWLALGAIIAASMGSTLTI  283 (293)
T ss_pred             HHHHHhcChhHHHHHHHhHHHHHHHHHHHH--hCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence            999999999999999999999999999999  999999999999999999999886544

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=97.59  E-value=0.0044  Score=56.60  Aligned_cols=143  Identities=13%  Similarity=0.079  Sum_probs=94.0

Q ss_pred             hHHHHHHHHHHHHHHHhHHHHHHHHhhhCCCCChHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHHHHHH
Q 019428          159 SMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEA  238 (341)
Q Consensus       159 ~~~G~~l~l~a~~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~l~l~~  238 (341)
                      ...+....+.+.+.++......+.....  ..+.....++....+.+...+...  .+.   ..........+..++...
T Consensus         5 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~   77 (292)
T COG0697           5 LLLGLLALLLWGLLWGLSFIALKLAVES--LDPFLFAAALRFLIAALLLLPLLL--LEP---RGLRPALRPWLLLLLLAL   77 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcc--cCChHHHHHHHHHHHHHHHHHHHH--hhc---ccccccccchHHHHHHHH
Confidence            4567777777778888877776665443  123344444344434333221111  100   000011111223344445


Q ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH-HhhCCCcchhhhHHHHHHHHHHHHHhccCCCC
Q 019428          239 MATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSY-LIFTKPLTEQHGTGLLLIAMGITLKLLPADDK  308 (341)
Q Consensus       239 ~~~~l~~~~~~~~i~~~sa~t~si~~~l~~v~~ills~-~~f~e~~t~~~~iG~~lil~Gv~~y~~~k~~~  308 (341)
                      +.....+.+++..++++++...++.....|+++.+++. ++++|+++..+++|..+.+.|+.+........
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~  148 (292)
T COG0697          78 LGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGG  148 (292)
T ss_pred             HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcc
Confidence            66567778889999999999999999999999999996 66799999999999999999999988765543

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=97.58  E-value=0.00013  Score=66.98  Aligned_cols=212  Identities=14%  Similarity=0.137  Sum_probs=121.7

Q ss_pred             HHHhhHHHHHHhhcCCchhHHHHHhhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHHhccCCCCCC-------
Q 019428           84 VLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSP-------  156 (341)
Q Consensus        84 ~~~~~~~l~~~sl~~is~~~~~l~ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~~~~~~~~~-------  156 (341)
                      .+..+-..++.|+.|.+.+..+-+-+.+.+..++++..+  ++||.++.-.+++.++++|-.+.+...++...       
T Consensus        73 tm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~--L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~el  150 (335)
T KOG2922|consen   73 TMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFF--LKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEEV  150 (335)
T ss_pred             HHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHH--HHHHHHHhhhhheeEEecccEEEEEecCcccccccHHHH
Confidence            366777888999999999888888888999999999999  99999999999999999998877665543321       


Q ss_pred             -----CchHHHHHHHHHHHHHHHhHHHHHHHHhhhCCCCChHHHHHHHHHHHHHHHHHHHhh--cchHHH-HHH--HHhh
Q 019428          157 -----NFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLL--TGELFK-AWN--SCSQ  226 (341)
Q Consensus       157 -----~~~~~G~~l~l~a~~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~g~~~~-~~~--~~~~  226 (341)
                           +.....+...+.-.++  + -++  ....++..   ..++-|..+.+..-.+-.+-.  -|+..+ .++  ....
T Consensus       151 ~~~~~~~~Fliy~~~iil~~~--i-l~~--~~~p~~g~---tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~~ql~  222 (335)
T KOG2922|consen  151 WELATEPGFLVYVIIIILIVL--I-LIF--FYAPRYGQ---TNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGNNQLF  222 (335)
T ss_pred             HHHhcCccHHHHHHHHHHHHH--H-Hhe--eecccccc---cceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCCcccc
Confidence                 1111111111111110  0 011  01112221   123345444333221110000  011110 000  0112


Q ss_pred             chHHHHHHHHHHHHHHHHH-HHHHHHHHHhhHHHHHH-HHHHHHHHHHHHHHHhhCC--Ccch----hhhHHHHHHHHHH
Q 019428          227 HLYVYGVLVFEAMATFIGQ-VSVLSLIALFGAATTAM-VTTARKAVTLLLSYLIFTK--PLTE----QHGTGLLLIAMGI  298 (341)
Q Consensus       227 ~~~~~~~l~l~~~~~~l~~-~~~~~~i~~~sa~t~si-~~~l~~v~~ills~~~f~e--~~t~----~~~iG~~lil~Gv  298 (341)
                      +|..|..++....+ ...| ...+.+++.+++...+- .-.+-..++++.|.++|.|  ..+.    ....|...++.|+
T Consensus       223 ~~~ty~~~l~~~~~-~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~  301 (335)
T KOG2922|consen  223 YPLTWIFLLVVATC-VSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFLGI  301 (335)
T ss_pred             cHHHHHHHHHHHHH-HHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhhee
Confidence            34444333332233 3344 34578899888876544 4445788899999999986  4444    4567888888888


Q ss_pred             HHHhccCC
Q 019428          299 TLKLLPAD  306 (341)
Q Consensus       299 ~~y~~~k~  306 (341)
                      ++-...|.
T Consensus       302 flL~~~kd  309 (335)
T KOG2922|consen  302 FLLHRTKD  309 (335)
T ss_pred             eEeeeecc
Confidence            87754443

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.57  E-value=0.00086  Score=53.70  Aligned_cols=67  Identities=16%  Similarity=0.138  Sum_probs=54.0

Q ss_pred             HHHHHHHHHHHHHHHHhhHHH-HHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhccC
Q 019428          239 MATFIGQVSVLSLIALFGAAT-TAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPA  305 (341)
Q Consensus       239 ~~~~l~~~~~~~~i~~~sa~t-~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~~k  305 (341)
                      ++-.+++.++..++++.+-.. +++...+--+.+.++|+++|||++|+.+++|+.+++.|+..-+...
T Consensus        38 ~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         38 VMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            333456667777888877544 6666777888999999999999999999999999999998876544

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.56  E-value=0.08  Score=50.25  Aligned_cols=220  Identities=9%  Similarity=0.017  Sum_probs=123.5

Q ss_pred             HHHHHHHhhHHHHHHhhcCCchhHHH-HHhhcchHHHHHHHHhhccccccc---C----hhHHHHHHHHHHHHHHHhc--
Q 019428           80 KLSAVLMGSHGLTKGSLAFLNYPAQL-MFKSTKVLPVMVMGAFIPGLRRKY---P----AHEYVSALLLVVGLILFTL--  149 (341)
Q Consensus        80 ~~~~~~~~~~~l~~~sl~~is~~~~~-l~ks~~pv~v~ll~~l~~~~~~k~---s----~~~~~~l~l~~~Gv~l~~~--  149 (341)
                      .-+++..........+.+|+.++... +......+...++..++  ++|=.   +    ..-.++++++++|+++.+.  
T Consensus        78 l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~--~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag  155 (345)
T PRK13499         78 LFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPII--NGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAG  155 (345)
T ss_pred             HHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHH--ccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence            34666788888899999998777654 33445566777777777  66432   2    3346889999999999998  


Q ss_pred             --cCCCC-----CCCchHHHHHHHHHHHHHHHhHHH-------HHHHHhhhCCCCChHHHHHHHH---HHHHHHH-HHHH
Q 019428          150 --ADAQT-----SPNFSMIGVIMISGALIMDSFLGN-------LQEAIFTMNPETTQMEMLFCST---VVGLPML-IPPM  211 (341)
Q Consensus       150 --~~~~~-----~~~~~~~G~~l~l~a~~~~al~~v-------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l-~~~~  211 (341)
                        .|.+.     +..+.-.|++.++++.+.++.++.       ..+.... .+ .++.....-..   .++.... +...
T Consensus       156 ~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~-~g-~~~~~~~lp~~~~~~~G~~~~n~~~~  233 (345)
T PRK13499        156 QLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAA-LG-VDPLYAALPSYVVIMGGGAITNLGFC  233 (345)
T ss_pred             hhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhh-cC-CCchHHHHHHHHHHHHHHHHHHHHHH
Confidence              55422     123457899999999999999983       3322111 11 12221111111   1121111 1111


Q ss_pred             hh---cchHHH-HHHHHhhchHHHHHH---HHHHHHHHHHHHHHHHHHHHhhHHHHHH---HH-HHHHHHHHHHHHHhhC
Q 019428          212 LL---TGELFK-AWNSCSQHLYVYGVL---VFEAMATFIGQVSVLSLIALFGAATTAM---VT-TARKAVTLLLSYLIFT  280 (341)
Q Consensus       212 ~~---~g~~~~-~~~~~~~~~~~~~~l---~l~~~~~~l~~~~~~~~i~~~sa~t~si---~~-~l~~v~~ills~~~f~  280 (341)
                      ..   .++-.+ ..+.....+..+.-.   .+.++.=.+++.++...-++.+.....+   .+ .+.-+++.+.|+ ++|
T Consensus       234 ~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lk  312 (345)
T PRK13499        234 FIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLK  312 (345)
T ss_pred             HHHHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhh
Confidence            10   111000 000000001112221   2223333445556666666664443333   33 666688899998 488


Q ss_pred             CCcc------hhhhHHHHHHHHHHHHHhcc
Q 019428          281 KPLT------EQHGTGLLLIAMGITLKLLP  304 (341)
Q Consensus       281 e~~t------~~~~iG~~lil~Gv~~y~~~  304 (341)
                      |.=+      ...++|+++++.|..+-.+.
T Consensus       313 E~K~a~~k~~~~l~~G~vliI~g~~lig~~  342 (345)
T PRK13499        313 EWKGASRRPVRVLSLGCVVIILAANIVGLG  342 (345)
T ss_pred             hccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence            8655      67799999999999876654

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.50  E-value=0.001  Score=60.25  Aligned_cols=70  Identities=17%  Similarity=0.290  Sum_probs=63.2

Q ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhccCCCC
Q 019428          239 MATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADDK  308 (341)
Q Consensus       239 ~~~~l~~~~~~~~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~~k~~~  308 (341)
                      +.-++.+.+.+.++++.+|.+..+....|.+++.++++++++++++..||+++.+.+.|+.+........
T Consensus        25 ~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~   94 (244)
T PF04142_consen   25 LLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS   94 (244)
T ss_pred             HHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence            4445677889999999999999999999999999999999999999999999999999999987765544

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.48  E-value=0.0043  Score=58.64  Aligned_cols=77  Identities=12%  Similarity=0.215  Sum_probs=68.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhccCCC
Q 019428          230 VYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADD  307 (341)
Q Consensus       230 ~~~~l~l~~~~~~l~~~~~~~~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~~k~~  307 (341)
                      +|.++++ +++=..++++...+.++++-++.++......++++++|++++++++++.|++|++++++|+.+.......
T Consensus        79 ~w~y~ll-a~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~  155 (334)
T PF06027_consen   79 WWKYFLL-ALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVL  155 (334)
T ss_pred             HHHHHHH-HHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeeccc
Confidence            4555555 4666789999999999999999999999999999999999999999999999999999999987776544

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.41  E-value=0.0013  Score=53.57  Aligned_cols=72  Identities=14%  Similarity=0.103  Sum_probs=59.9

Q ss_pred             HHHHHH-HHHhhHHHHHHhhcCCchhHHHHHhhcchHHHHHHHHh--hcccccccChhHHHHHHHHHHHHHHHhccC
Q 019428           78 YVKLSA-VLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAF--IPGLRRKYPAHEYVSALLLVVGLILFTLAD  151 (341)
Q Consensus        78 ~~~~~~-~~~~~~~l~~~sl~~is~~~~~l~ks~~pv~v~ll~~l--~~~~~~k~s~~~~~~l~l~~~Gv~l~~~~~  151 (341)
                      ++..++ ++..+..+.+.+++..+.+.+.-+-+..++.+.+.++.  +  ++|+++++++++++++++|+.++...+
T Consensus        50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~--~~E~ls~~~~iGi~lIi~GV~lv~~~~  124 (129)
T PRK02971         50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPW--FNETFSLKKTLGVACIMLGVWLINLPT  124 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHH--cCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence            344444 57899999999999999998887777777778777774  7  899999999999999999999987543

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.39  E-value=0.0019  Score=60.13  Aligned_cols=128  Identities=10%  Similarity=-0.002  Sum_probs=91.8

Q ss_pred             CCchhHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHH----HHHHHHHhc-CCCCCCCchhHHHHHHHHHHHhhHHHHH
Q 019428           19 GNNFSFALLGSSLVISSMASARLQFSYGWYFTFIQGFV----YLVLIYLQG-FTTKQMMNPWKTYVKLSAVLMGSHGLTK   93 (341)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~i~~~~~F~~~~~lt~~q~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~   93 (341)
                      +++..+.+.++..+..+.++.+..-.-|...++.|+..    ..++..... .++. .....+..+..+++......+-.
T Consensus       151 ~~Gi~~~l~sg~~y~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Gi~~~ia~~~y~  229 (290)
T TIGR00776       151 KKGILLLLMSTIGYLVYVVVAKAFGVDGLSVLLPQAIGMVIGGIIFNLGHILAKPL-KKYAILLNILPGLMWGIGNFFYL  229 (290)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHcCCCcceehhHHHHHHHHHHHHHHHHHhcccch-HHHHHHHHHHHHHHHHHHHHHHH
Confidence            56999999999999888877764323456666666552    211111110 0111 11122333346666667777788


Q ss_pred             Hhhc-CCchhHHHHHhhcchHHHHHHHHhhcccccccChhHH----HHHHHHHHHHHHHhc
Q 019428           94 GSLA-FLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEY----VSALLLVVGLILFTL  149 (341)
Q Consensus        94 ~sl~-~is~~~~~l~ks~~pv~v~ll~~l~~~~~~k~s~~~~----~~l~l~~~Gv~l~~~  149 (341)
                      .+++ ++..+.+.++-+..|+...+.++++  +||+.+++|+    ++.++++.|+.+...
T Consensus       230 ~~~~~~~~~~~~~~ls~~~pvia~~~~v~~--l~E~~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       230 FSAQPKVGVATSFSLSQLGVIISTLGGILI--LGEKKTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             HHcccccchhhHHHHHHHHHHHHHHHHHHH--hccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence            8999 9999999999999999999999999  9999999999    999999999988754

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.35  E-value=0.0076  Score=57.08  Aligned_cols=141  Identities=13%  Similarity=0.072  Sum_probs=90.1

Q ss_pred             chHHHHHHHHHHHHHHHhHHHHHHHHhhhCCCCChHHHHHHHHHHHH--HHHHH---HHhhcchHHHHHHHHhhchHHHH
Q 019428          158 FSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGL--PMLIP---PMLLTGELFKAWNSCSQHLYVYG  232 (341)
Q Consensus       158 ~~~~G~~l~l~a~~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~---~~~~~g~~~~~~~~~~~~~~~~~  232 (341)
                      ....|+++++++.+|++-..+-+|| .++.    ++|.. |. ..+.  .++.|   ..+..+++.+...  +.++..+.
T Consensus         4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~w----~wE~~-W~-v~gi~~wl~~~~~~g~~~~~~f~~~~~--~~~~~~~~   74 (345)
T PRK13499          4 AIILGIIWHLIGGASSGSFYAPFKK-VKKW----SWETM-WS-VGGIFSWLILPWLIAALLLPDFWAYYS--SFSGSTLL   74 (345)
T ss_pred             hhHHHHHHHHHHHHHhhcccccccc-cCCC----chhHH-HH-HHHHHHHHHHHHHHHHHHhhhHHHHHH--hcCHHHHH
Confidence            3578999999999999998887776 2222    24443 22 1111  11112   1122233322221  12444444


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhHHH-HHHHHHHHHHHHHHHHHHhhCC-------CcchhhhHHHHHHHHHHHHHhcc
Q 019428          233 VLVFEAMATFIGQVSVLSLIALFGAAT-TAMVTTARKAVTLLLSYLIFTK-------PLTEQHGTGLLLIAMGITLKLLP  304 (341)
Q Consensus       233 ~l~l~~~~~~l~~~~~~~~i~~~sa~t-~si~~~l~~v~~ills~~~f~e-------~~t~~~~iG~~lil~Gv~~y~~~  304 (341)
                      .-+++++.=.+++..++..+++.|-.. ..+..-+.-+.+.+++.+++||       +-.....+|+++++.|+.+..+.
T Consensus        75 ~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~A  154 (345)
T PRK13499         75 PVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRA  154 (345)
T ss_pred             HHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence            444555555788999999999988654 5666667788899999999985       22345789999999999999885


Q ss_pred             CCC
Q 019428          305 ADD  307 (341)
Q Consensus       305 k~~  307 (341)
                      ..+
T Consensus       155 g~~  157 (345)
T PRK13499        155 GQL  157 (345)
T ss_pred             hhh
Confidence            443

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.35  E-value=0.012  Score=48.40  Aligned_cols=131  Identities=21%  Similarity=0.275  Sum_probs=87.2

Q ss_pred             HHHHHHHHHHHHhHHHHHHHHhhhCCCCChHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHHHHHHHHHH
Q 019428          163 VIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATF  242 (341)
Q Consensus       163 ~~l~l~a~~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~l~l~~~~~~  242 (341)
                      .++++++-++-+++..++-++.++.+  +++...+.+...++..+....+..++.  ........| +|.  ++.++.+.
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~~g--s~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p-~w~--~lGG~lG~   75 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKALG--SPLVASFISFGVGFILLLIILLITGRP--SLASLSSVP-WWA--YLGGLLGV   75 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhC--ccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCC-hHH--hccHHHHH
Confidence            45666777777777777777665532  367777777777777666554544432  111112222 232  33567776


Q ss_pred             HHHHHHHHHHHHhhHHHHHHHHHHHH-HHHHHHHHH-hhC---CCcchhhhHHHHHHHHHHHH
Q 019428          243 IGQVSVLSLIALFGAATTAMVTTARK-AVTLLLSYL-IFT---KPLTEQHGTGLLLIAMGITL  300 (341)
Q Consensus       243 l~~~~~~~~i~~~sa~t~si~~~l~~-v~~ills~~-~f~---e~~t~~~~iG~~lil~Gv~~  300 (341)
                      +...+....+++.|+..+......-+ +.+++++.+ +|+   +++++.+++|.++++.|+.+
T Consensus        76 ~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   76 FFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            77777788899999998877776644 455666665 444   68999999999999999863

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.35  E-value=0.0025  Score=50.34  Aligned_cols=64  Identities=19%  Similarity=0.176  Sum_probs=52.7

Q ss_pred             HHHHHHHHHHHHHhhHHH-HHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhccC
Q 019428          242 FIGQVSVLSLIALFGAAT-TAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPA  305 (341)
Q Consensus       242 ~l~~~~~~~~i~~~sa~t-~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~~k  305 (341)
                      .+++.++..++++.+-.. +++-..+..+.+.++|+++|+|++++.+++|+.+++.|+..-+..+
T Consensus        41 ~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         41 CASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            445566667788877544 6777778888999999999999999999999999999999886544

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=97.22  E-value=0.0066  Score=50.32  Aligned_cols=67  Identities=9%  Similarity=0.125  Sum_probs=60.0

Q ss_pred             HHHHHHHhhHHHHHHhhcCCchhHHHHHhhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHHh
Q 019428           80 KLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFT  148 (341)
Q Consensus        80 ~~~~~~~~~~~l~~~sl~~is~~~~~l~ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~  148 (341)
                      ..+++.......++..++++|.-++++....+.+.+.++++++  ++|+++..++.|+.+++.|+.+..
T Consensus        86 ~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~--f~~~~t~~~~~G~~l~~~G~~~Ys  152 (153)
T PF03151_consen   86 LSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIF--FGEPITPLQIIGIVLALVGVLLYS  152 (153)
T ss_pred             HHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhh--cCCcCCHHHHHHHHHHHHHHheee
Confidence            3355567778889999999999999999999999999999999  999999999999999999998643

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.20  E-value=0.003  Score=50.64  Aligned_cols=72  Identities=8%  Similarity=0.179  Sum_probs=60.5

Q ss_pred             HHHHHHHHHhhHHHHHHhhcCCchhHHH-HHhhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHHhccC
Q 019428           78 YVKLSAVLMGSHGLTKGSLAFLNYPAQL-MFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLAD  151 (341)
Q Consensus        78 ~~~~~~~~~~~~~l~~~sl~~is~~~~~-l~ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~~~~  151 (341)
                      +...-+++..+..+...++++++.+.+- +-.....+.+.+.++++  ++|++++.+++++.++++|++.....+
T Consensus        33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~--f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLL--FDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            3445567889999999999999988654 44567888899999999  999999999999999999999886544

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=97.11  E-value=0.0021  Score=58.19  Aligned_cols=73  Identities=10%  Similarity=0.046  Sum_probs=47.8

Q ss_pred             HHHHHHHHHHHHHHHHhhHH-HHHHHHHHHHHHHHHHHHH-hhCC-----CcchhhhHHHHHHHHHHHHHhccCCCCccc
Q 019428          239 MATFIGQVSVLSLIALFGAA-TTAMVTTARKAVTLLLSYL-IFTK-----PLTEQHGTGLLLIAMGITLKLLPADDKPIK  311 (341)
Q Consensus       239 ~~~~l~~~~~~~~i~~~sa~-t~si~~~l~~v~~ills~~-~f~e-----~~t~~~~iG~~lil~Gv~~y~~~k~~~~~~  311 (341)
                      ..=+.++.+..-+++..|=. -..+-+...-+..-..|.+ +||+     .-.+.+++|+++++.|..+|...|.+++++
T Consensus        63 ~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~~~~  142 (254)
T PF07857_consen   63 ALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEEKEP  142 (254)
T ss_pred             hhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCCCCc
Confidence            33345566666666666633 3444455555566666654 6763     236799999999999999999988776443

The region concerned is approximately 280 residues long.

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.07  E-value=0.0067  Score=47.18  Aligned_cols=64  Identities=20%  Similarity=0.104  Sum_probs=54.1

Q ss_pred             HHHHHHHHHHHHHhhHH-HHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhccC
Q 019428          242 FIGQVSVLSLIALFGAA-TTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPA  305 (341)
Q Consensus       242 ~l~~~~~~~~i~~~sa~-t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~~k  305 (341)
                      .+++.+.-..+|+.+-. .+++-+-+-.+.+.+.|+++|+|++++.+++|+.+++.|+..-+..+
T Consensus        41 ~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~s  105 (106)
T COG2076          41 GLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLGS  105 (106)
T ss_pred             HHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhcC
Confidence            35566667788887754 48888999999999999999999999999999999999998776543

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.05  E-value=0.0053  Score=47.73  Aligned_cols=71  Identities=11%  Similarity=0.134  Sum_probs=58.9

Q ss_pred             HHHHHHHHHhhHHHHHHhhcCCchhHH-HHHhhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHHhcc
Q 019428           78 YVKLSAVLMGSHGLTKGSLAFLNYPAQ-LMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLA  150 (341)
Q Consensus        78 ~~~~~~~~~~~~~l~~~sl~~is~~~~-~l~ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~~~  150 (341)
                      ....-+++..+..+.-.++++++.+.+ .+-.....+-+.+.++++  |+|+.+..+++++.++++|++..-..
T Consensus        33 ~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~--f~E~l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          33 SILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLL--FGESLSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHh--cCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence            344456688999999999999998765 455556777888999999  99999999999999999999987543

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.01  E-value=0.0093  Score=46.63  Aligned_cols=62  Identities=13%  Similarity=0.072  Sum_probs=52.7

Q ss_pred             HHHHHHHHHHHHHhhHH-HHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhc
Q 019428          242 FIGQVSVLSLIALFGAA-TTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLL  303 (341)
Q Consensus       242 ~l~~~~~~~~i~~~sa~-t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~  303 (341)
                      .+++.+...++|+.+-. .+++-.-+-.+.+.++|+++|+|++++.+++|+.+++.|+..-+.
T Consensus        40 ~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         40 IVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            45566667778887754 588888889999999999999999999999999999999987654

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.98  E-value=0.0067  Score=47.42  Aligned_cols=72  Identities=15%  Similarity=0.202  Sum_probs=58.5

Q ss_pred             HHHHHHHHHHHhhHHHHHHhhcCCchhHH-HHHhhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHHhc
Q 019428           76 KTYVKLSAVLMGSHGLTKGSLAFLNYPAQ-LMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTL  149 (341)
Q Consensus        76 ~~~~~~~~~~~~~~~l~~~sl~~is~~~~-~l~ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~~  149 (341)
                      ......-+++..+..+...+++.++.+.+ .+--....+-+.+.++++  |+|+.++.+++++.++++|++..-.
T Consensus        30 ~~~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~--f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         30 TPSIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVL--LGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHH--hCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            33344456788999999999999998754 444556777888999999  9999999999999999999998643

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.98  E-value=0.0067  Score=47.75  Aligned_cols=68  Identities=7%  Similarity=0.253  Sum_probs=56.3

Q ss_pred             HHHHHHHHHhhHHHHHHhhcCCchhHH-HHHhhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHH
Q 019428           78 YVKLSAVLMGSHGLTKGSLAFLNYPAQ-LMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILF  147 (341)
Q Consensus        78 ~~~~~~~~~~~~~l~~~sl~~is~~~~-~l~ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~  147 (341)
                      .....+++..+..+...++++++.+.+ .+--....+.+.+.++++  ++|+.++.|++++.+++.|++..
T Consensus        38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~--f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         38 GILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWIL--FGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHH--cCCCCCHHHHHHHHHHHHHHHHh
Confidence            344455688899999999999998755 344456677888999999  99999999999999999999875

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=96.95  E-value=0.0083  Score=47.34  Aligned_cols=70  Identities=10%  Similarity=0.180  Sum_probs=58.1

Q ss_pred             HHHHHHHhhHHHHHHhhcCCchhHHHHH-hhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHHhccC
Q 019428           80 KLSAVLMGSHGLTKGSLAFLNYPAQLMF-KSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLAD  151 (341)
Q Consensus        80 ~~~~~~~~~~~l~~~sl~~is~~~~~l~-ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~~~~  151 (341)
                      ..-++|..+..+...+++.++.+.+--+ -....+.+.+.++++  |+|+.++.+++++.++++|++.....+
T Consensus        35 ~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~--f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGF--FGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            3445688888999999999998876544 345677888999999  999999999999999999999986544

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.88  E-value=0.014  Score=45.97  Aligned_cols=61  Identities=16%  Similarity=0.218  Sum_probs=51.5

Q ss_pred             HHHHHHHHHHHHHhhHH-HHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHh
Q 019428          242 FIGQVSVLSLIALFGAA-TTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKL  302 (341)
Q Consensus       242 ~l~~~~~~~~i~~~sa~-t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~  302 (341)
                      .+++.+...++|+.+-. .+++-..+-.+.+.++|+++|||++++.+++|+.+++.|+..-+
T Consensus        46 ~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         46 LAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            45566666778877754 47888888899999999999999999999999999999998753

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=96.84  E-value=0.017  Score=53.97  Aligned_cols=121  Identities=18%  Similarity=0.175  Sum_probs=84.9

Q ss_pred             chHHHHHHHHHHHHHHHhHHHHHHHHhhhCCCCChHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHHHHH
Q 019428          158 FSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFE  237 (341)
Q Consensus       158 ~~~~G~~l~l~a~~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~l~l~  237 (341)
                      +...|..+++.++++.+...++||+-..+.++. ...                   .++  ...++ ..+|.+|.-+.+.
T Consensus         4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~-~~~-------------------~~~--~~~~~-l~~~~W~~G~~~~   60 (300)
T PF05653_consen    4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRG-SLR-------------------AGS--GGRSY-LRRPLWWIGLLLM   60 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccc-------------------ccc--hhhHH-HhhHHHHHHHHHH
Confidence            468899999999999999999999865543221 010                   000  00011 1233333222221


Q ss_pred             HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhccC
Q 019428          238 AMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPA  305 (341)
Q Consensus       238 ~~~~~l~~~~~~~~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~~k  305 (341)
                          .++....+.++...++...+..+.+.-+.+.+++..+++|+++...+.|..+++.|..+.....
T Consensus        61 ----~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~  124 (300)
T PF05653_consen   61 ----VLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFA  124 (300)
T ss_pred             ----hcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeC
Confidence                3445555667778888889999999999999999999999999999999999999998765443

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=96.19  E-value=0.077  Score=48.49  Aligned_cols=124  Identities=15%  Similarity=0.142  Sum_probs=82.2

Q ss_pred             CCchhHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHH-h--cCCCCCCCchhHHHHHHHHHHHhhHHHHHHh
Q 019428           19 GNNFSFALLGSSLVISSMASARLQFSYGWYFTFIQGFVYLVLIYL-Q--GFTTKQMMNPWKTYVKLSAVLMGSHGLTKGS   95 (341)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~i~~~~~F~~~~~lt~~q~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s   95 (341)
                      ++++..+++++.-+..+..+.++.--.|+...+-|.+--.+...+ .  ..++.+.+..++. +.-++++...+.+...|
T Consensus       137 ~kgi~~Ll~stigy~~Y~~~~~~~~~~~~~~~lPqaiGm~i~a~i~~~~~~~~~~~k~~~~n-il~G~~w~ignl~~~is  215 (269)
T PF06800_consen  137 KKGILALLISTIGYWIYSVIPKAFHVSGWSAFLPQAIGMLIGAFIFNLFSKKPFFEKKSWKN-ILTGLIWGIGNLFYLIS  215 (269)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhcCCChhHhHHHHHHHHHHHHHHHhhcccccccccchHHh-hHHHHHHHHHHHHHHHh
Confidence            347788888887787777776653335666666664432221111 1  1111122233333 44578888888889999


Q ss_pred             hcCCchhHHHHHhhcchHHHHHHHHhhcccccccChhHH----HHHHHHHHHHH
Q 019428           96 LAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEY----VSALLLVVGLI  145 (341)
Q Consensus        96 l~~is~~~~~l~ks~~pv~v~ll~~l~~~~~~k~s~~~~----~~l~l~~~Gv~  145 (341)
                      -+.+.++..-.+.++.++...+.+.++  +||+-+++++    ++++++++|.+
T Consensus       216 ~~~~G~a~af~lSQ~~vvIStlgGI~i--l~E~Kt~ke~~~~~~G~~Liv~G~i  267 (269)
T PF06800_consen  216 AQKNGVATAFTLSQLGVVISTLGGIFI--LKEKKTKKEMIYTLIGLILIVIGAI  267 (269)
T ss_pred             HHhccchhhhhHHhHHHHHHHhhhheE--EEecCchhhHHHHHHHHHHHHHhhh
Confidence            999888888888888888889999999  9999998876    44555555544

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.01  E-value=0.034  Score=42.44  Aligned_cols=53  Identities=15%  Similarity=0.049  Sum_probs=31.3

Q ss_pred             HHHHHHHHHHHHHhhHHH-HHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHH
Q 019428          242 FIGQVSVLSLIALFGAAT-TAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLI  294 (341)
Q Consensus       242 ~l~~~~~~~~i~~~sa~t-~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~li  294 (341)
                      .++..++..++|+.+... +++...+-.+.+.+.|+++|||++|+.+++|+.++
T Consensus        40 ~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   40 GLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            455667778888877655 47777788899999999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.97  E-value=0.35  Score=40.18  Aligned_cols=138  Identities=18%  Similarity=0.178  Sum_probs=81.0

Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHhhhCCCCChHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHHHHHHH
Q 019428          160 MIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAM  239 (341)
Q Consensus       160 ~~G~~l~l~a~~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~l~l~~~  239 (341)
                      ....++.++|.++-.++...+.++.+..+  +|.-..+.+...+...+....+...+ ...+......| +|.++  .++
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~--spl~As~isf~vGt~~L~~l~l~~~~-~~~~a~~~~~p-wW~~~--GG~   77 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLG--SPLLASLISFLVGTVLLLILLLIKQG-HPGLAAVASAP-WWAWI--GGL   77 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcC--ChHHHHHHHHHHHHHHHHHHHHHhcC-CCchhhccCCc-hHHHH--ccc
Confidence            45566777777777888888777655432  35545555566666665554333222 11122112223 33322  234


Q ss_pred             HHHHHHHHHHHHHHHhhHHHHHHHHHH-HHHHHHHHHHHhhC----CCcchhhhHHHHHHHHHHHHHhc
Q 019428          240 ATFIGQVSVLSLIALFGAATTAMVTTA-RKAVTLLLSYLIFT----KPLTEQHGTGLLLIAMGITLKLL  303 (341)
Q Consensus       240 ~~~l~~~~~~~~i~~~sa~t~si~~~l-~~v~~ills~~~f~----e~~t~~~~iG~~lil~Gv~~y~~  303 (341)
                      .+.+.-...-....+.|++++..+... .-+.+++++.+=+.    .+++...++|++++++|+++...
T Consensus        78 lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~  146 (150)
T COG3238          78 LGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARR  146 (150)
T ss_pred             hhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcc
Confidence            443333444567788888776655554 44556666665443    58999999999999999665543

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=95.57  E-value=1  Score=42.52  Aligned_cols=64  Identities=22%  Similarity=0.273  Sum_probs=58.6

Q ss_pred             HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhccC
Q 019428          242 FIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPA  305 (341)
Q Consensus       242 ~l~~~~~~~~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~~k  305 (341)
                      ++-|...|..+.+.+|.+..+...+|-..+.++++++++++++..||....+.+.|+.+.....
T Consensus       103 alqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~  166 (345)
T KOG2234|consen  103 ALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPS  166 (345)
T ss_pred             HHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccC
Confidence            3445688999999999999999999999999999999999999999999999999999988443

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=95.54  E-value=0.21  Score=44.89  Aligned_cols=128  Identities=11%  Similarity=-0.040  Sum_probs=81.2

Q ss_pred             CchhHHHHHHHHHHHHHHHhhc-c-CChhHHHHHHHHHHHHHHHHHhcCCCCCCCchhHHHHHH----HHHH-HhhHHHH
Q 019428           20 NNFSFALLGSSLVISSMASARL-Q-FSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKL----SAVL-MGSHGLT   92 (341)
Q Consensus        20 ~~~~~~~~~~~~~~~~~i~~~~-~-F~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~l~   92 (341)
                      .|..|++.....+..+.+..+- + =..+..=+..-+.+..++....+.........-...++.    +++- .+...+.
T Consensus       148 ~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~~g~a~gm~vAaviv~Pig~~~ag~~l~~p~ll~laLgvavlSSalPYsLE  227 (292)
T COG5006         148 VGVALALGAGACWALYIVLGQRAGRAEHGTAGVAVGMLVAALIVLPIGAAQAGPALFSPSLLPLALGVAVLSSALPYSLE  227 (292)
T ss_pred             HHHHHHHHHhHHHHHHHHHcchhcccCCCchHHHHHHHHHHHHHhhhhhhhcchhhcChHHHHHHHHHHHHhcccchHHH
Confidence            4666777777777766655432 2 223333334444443333221121110000111122222    3332 5667899


Q ss_pred             HHhhcCCchhHHHHHhhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHHhc
Q 019428           93 KGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTL  149 (341)
Q Consensus        93 ~~sl~~is~~~~~l~ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~~  149 (341)
                      ..++...+-+.+.+.-|..|.+-.+.++++  ++|++|..||+++..++.+.+=.+.
T Consensus       228 miAL~rlp~~~F~~LlSLePa~aAl~G~i~--L~e~ls~~qwlaI~~ViaAsaG~~l  282 (292)
T COG5006         228 MIALRRLPARTFGTLLSLEPALAALSGLIF--LGETLTLIQWLAIAAVIAASAGSTL  282 (292)
T ss_pred             HHHHhhCChhHHHHHHHhhHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHhcccc
Confidence            999999999999999999999999999999  9999999999999998887764433

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=95.45  E-value=0.0058  Score=55.03  Aligned_cols=72  Identities=18%  Similarity=0.422  Sum_probs=64.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhccC
Q 019428          234 LVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPA  305 (341)
Q Consensus       234 l~l~~~~~~l~~~~~~~~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~~k  305 (341)
                      +++-++.++.+....|++.++.+-.-+.++....|++++++++.+++|+.|....+|..+.+.|+.+..+..
T Consensus       100 LiLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPp  171 (346)
T KOG4510|consen  100 LILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPP  171 (346)
T ss_pred             EEeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCC
Confidence            455677778888888999999999999999999999999999999999999999999999999998876544

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=95.30  E-value=0.05  Score=41.50  Aligned_cols=57  Identities=12%  Similarity=0.137  Sum_probs=34.4

Q ss_pred             HHHHHhhHHHHHHhhcCCchhHH-HHHhhcchHHHHHHHHhhcccccccChhHHHHHHHH
Q 019428           82 SAVLMGSHGLTKGSLAFLNYPAQ-LMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLL  140 (341)
Q Consensus        82 ~~~~~~~~~l~~~sl~~is~~~~-~l~ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~  140 (341)
                      -.+|..+..+...++++++.+.+ .+......+.+.+.+.++  ++|+.+..|++++.++
T Consensus        36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~--f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFF--FGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHH--H--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHH--hCCCCCHHHHhheeeC
Confidence            34688999999999999988765 455667888999999999  9999999999998764

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=95.29  E-value=0.039  Score=52.07  Aligned_cols=74  Identities=14%  Similarity=0.216  Sum_probs=66.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhccCCCCc
Q 019428          236 FEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADDKP  309 (341)
Q Consensus       236 l~~~~~~l~~~~~~~~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~~k~~~~  309 (341)
                      ..|..=+++++.++.+++.++....++++....++++.+|.++-+|++|+.+.++..+.++|+++.+..+.+++
T Consensus       164 ~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~  237 (416)
T KOG2765|consen  164 FFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQN  237 (416)
T ss_pred             HHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEecccccc
Confidence            34555578899999999999999999999999999999999999999999999999999999999988766553

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=95.03  E-value=0.66  Score=43.66  Aligned_cols=141  Identities=11%  Similarity=0.032  Sum_probs=79.0

Q ss_pred             chHHHHHHHHHHHHHHHhHHHHHHHHhhhCCCCChHHHHHHH-HHH---HHHHHHHHHhhcchHHHHHHHHhhch-HHHH
Q 019428          158 FSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCS-TVV---GLPMLIPPMLLTGELFKAWNSCSQHL-YVYG  232 (341)
Q Consensus       158 ~~~~G~~l~l~a~~~~al~~v~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~l~~~~~~~g~~~~~~~~~~~~~-~~~~  232 (341)
                      .-+.|+++..++.++.+.+.+=.||+.+ .    ++|..... .++   -.|.+... +...++.+.   ....| ..+.
T Consensus         4 ~ii~Gii~h~iGg~~~~sfy~P~kkvk~-W----sWEs~Wlv~gi~swli~P~~~a~-l~ip~~~~i---~~~~~~~~l~   74 (344)
T PF06379_consen    4 AIILGIIFHAIGGFASGSFYVPFKKVKG-W----SWESYWLVQGIFSWLIVPWLWAL-LAIPDFFSI---YSATPASTLF   74 (344)
T ss_pred             hHHHHHHHHHHHHHHhhhhccchhhcCC-c----cHHHHHHHHHHHHHHHHHHHHHH-HhCCcHHHH---HHhCChhHHH
Confidence            3578999999999999888877666432 1    24443222 222   22322211 122333332   22233 2222


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhH-HHHHHHHHHHHHHHHHHHHHhhC-------CCcchhhhHHHHHHHHHHHHHhcc
Q 019428          233 VLVFEAMATFIGQVSVLSLIALFGA-ATTAMVTTARKAVTLLLSYLIFT-------KPLTEQHGTGLLLIAMGITLKLLP  304 (341)
Q Consensus       233 ~l~l~~~~~~l~~~~~~~~i~~~sa-~t~si~~~l~~v~~ills~~~f~-------e~~t~~~~iG~~lil~Gv~~y~~~  304 (341)
                      ...+.++.=.++...+-..+++.|- ...++.--+-.++..++--++.|       ++-.....+|.++++.|+.+..+.
T Consensus        75 ~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A  154 (344)
T PF06379_consen   75 WTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA  154 (344)
T ss_pred             HHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH
Confidence            2233344444666667677777764 34555555555555555444432       334567899999999999999877


Q ss_pred             CCC
Q 019428          305 ADD  307 (341)
Q Consensus       305 k~~  307 (341)
                      ...
T Consensus       155 G~~  157 (344)
T PF06379_consen  155 GSM  157 (344)
T ss_pred             HHh
Confidence            544

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=94.79  E-value=0.0076  Score=53.64  Aligned_cols=208  Identities=13%  Similarity=0.193  Sum_probs=129.8

Q ss_pred             HHHHHhhHHHHHHhhcCCchhHHH-HHhhcchHHHHHHHHhhcccccccChhHH----HHHHHHHHHHHHHhccCCCC--
Q 019428           82 SAVLMGSHGLTKGSLAFLNYPAQL-MFKSTKVLPVMVMGAFIPGLRRKYPAHEY----VSALLLVVGLILFTLADAQT--  154 (341)
Q Consensus        82 ~~~~~~~~~l~~~sl~~is~~~~~-l~ks~~pv~v~ll~~l~~~~~~k~s~~~~----~~l~l~~~Gv~l~~~~~~~~--  154 (341)
                      +++....-..++-|.+++.++.+. +......+-+.+++++.  |||=.+..+.    .+++++++|+.+.++.|.+.  
T Consensus        66 G~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~--f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~  143 (288)
T COG4975          66 GAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFV--FHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKE  143 (288)
T ss_pred             hhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEE--EeccCcchhHHHHHHHHHHHHHhheEeeeecccccc
Confidence            344567777888899998776553 22223445566788888  8998887774    68899999999999888532  


Q ss_pred             --CCCchHHHHHHHHHHHHHHHhHHHHHHHHhhhCCCCChHHHHHHHHHHHHHHHHHH-HhhcchHHHHHHHHhhchHHH
Q 019428          155 --SPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPP-MLLTGELFKAWNSCSQHLYVY  231 (341)
Q Consensus       155 --~~~~~~~G~~l~l~a~~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~g~~~~~~~~~~~~~~~~  231 (341)
                        +.++.-.|+...+.|.+-|-.|.+..+.. +    .+.+...+-++. +...-... ....+|.  ..     +...|
T Consensus       144 ~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f-~----v~g~saiLPqAi-GMv~~ali~~~~~~~~--~~-----~K~t~  210 (288)
T COG4975         144 EENPSNLKKGIVILLISTLGYVGYVVLFQLF-D----VDGLSAILPQAI-GMVIGALILGFFKMEK--RF-----NKYTW  210 (288)
T ss_pred             ccChHhhhhheeeeeeeccceeeeEeeeccc-c----ccchhhhhHHHH-HHHHHHHHHhhccccc--ch-----HHHHH
Confidence              12345678888888888887776654332 1    222322222221 21111111 0111110  00     11122


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhh----hHHHHHHHHHHHHHhccC
Q 019428          232 GVLVFEAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQH----GTGLLLIAMGITLKLLPA  305 (341)
Q Consensus       232 ~~l~l~~~~~~l~~~~~~~~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~----~iG~~lil~Gv~~y~~~k  305 (341)
                      ..+ +.++.=.+++.+.+..-++.|-.|.=..+.+--+++.+-|+++++|+=|.++    ++|+++++.|..+-...|
T Consensus       211 ~ni-i~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg~~K  287 (288)
T COG4975         211 LNI-IPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLGIAK  287 (288)
T ss_pred             HHH-hhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhheec
Confidence            222 2234445788888888888887776666777788999999999999877654    578888888887765544

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=94.06  E-value=0.077  Score=41.93  Aligned_cols=63  Identities=11%  Similarity=0.076  Sum_probs=50.2

Q ss_pred             HHHHhhHHHHHHhhcCCchhHHHHH-hhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHH
Q 019428           83 AVLMGSHGLTKGSLAFLNYPAQLMF-KSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILF  147 (341)
Q Consensus        83 ~~~~~~~~l~~~sl~~is~~~~~l~-ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~  147 (341)
                      ++|-.+...-++.+...+.|.+.-+ .++.-++|++.++++  .+|..+++.++++.+++.|+.++
T Consensus        49 ~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~l--ge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   49 LLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLL--GEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHh--cCcccchhHHHHHHHHHcCeeee
Confidence            3455556666778888887776644 688899999999998  67777888999999999998764

Many members are annotated as potential transmembrane proteins.

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=91.36  E-value=0.84  Score=36.10  Aligned_cols=58  Identities=19%  Similarity=0.260  Sum_probs=45.8

Q ss_pred             HHHHHHHHHHHHhhHHHHHHH-HHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHH
Q 019428          243 IGQVSVLSLIALFGAATTAMV-TTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITL  300 (341)
Q Consensus       243 l~~~~~~~~i~~~sa~t~si~-~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~  300 (341)
                      .+...++..+++.+=+.+..+ +.+.=+++.+.+.++.+|..+...++|+.+++.|+.+
T Consensus        53 ~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   53 SGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence            445667777888776655544 5777789999998888888899999999999999864

Many members are annotated as potential transmembrane proteins.

>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []

Probab=90.38  E-value=0.39  Score=39.33  Aligned_cols=12  Identities=42%  Similarity=0.667  Sum_probs=6.1

Q ss_pred             hHHHHHHHHHHH
Q 019428          288 GTGLLLIAMGIT  299 (341)
Q Consensus       288 ~iG~~lil~Gv~  299 (341)
                      ++|..+...|++
T Consensus        90 i~g~~~~~~G~~  101 (136)
T PF08507_consen   90 IIGLLLFLVGVI  101 (136)
T ss_pred             HHHHHHHHHHHH
Confidence            445555555544

In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=89.12  E-value=1.6  Score=40.96  Aligned_cols=134  Identities=12%  Similarity=0.089  Sum_probs=86.9

Q ss_pred             cCCCCCchhHHHHHHHHHHHHHHHhhccC-----C-hhHHHHHHHHHHHHHHHHHh------c--C---CCCCCCchhHH
Q 019428           15 IDPNGNNFSFALLGSSLVISSMASARLQF-----S-YGWYFTFIQGFVYLVLIYLQ------G--F---TTKQMMNPWKT   77 (341)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~F-----~-~~~~lt~~q~~~~~~~~~~~------~--~---~~~~~~~~~~~   77 (341)
                      ..-|..|..++..+...+.+..++.+...     + .+..+...+.-+........      +  .   ...+.+.+...
T Consensus       158 ~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~  237 (316)
T KOG1441|consen  158 LSFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLI  237 (316)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHH
Confidence            34455577777777777777766655422     1 22333333333332222101      1  1   00011122223


Q ss_pred             HHHHHHHHHhhHHHHHHhhcCCchhHHHHHhhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHHhcc
Q 019428           78 YVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLA  150 (341)
Q Consensus        78 ~~~~~~~~~~~~~l~~~sl~~is~~~~~l~ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~~~  150 (341)
                      +...++++...+...+..+..+|.-++++.-..+-+.+.+.++++  ++++.++.+.++..++++|+.+....
T Consensus       238 ~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~i--F~~pvt~~n~~G~~iai~Gv~~Y~~~  308 (316)
T KOG1441|consen  238 LLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLI--FGNPVTFLNALGYAIAILGVFLYSRA  308 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeee--ecCCCchhhHHHHHHHHHHHHHHHHH
Confidence            334466677777888899999999899988888888888999999  89999999999999999999987643

>TIGR00803 nst UDP-galactose transporter

Probab=89.12  E-value=0.33  Score=43.04  Aligned_cols=63  Identities=11%  Similarity=0.224  Sum_probs=54.1

Q ss_pred             HHHHHhhHHHHHHhhcCCchhHHHHHhhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHHH
Q 019428           82 SAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLIL  146 (341)
Q Consensus        82 ~~~~~~~~~l~~~sl~~is~~~~~l~ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l  146 (341)
                      .++.+..-.+-...++|.+..+..+..++.++++.+++.++  ++++++..++.+..++..|+.+
T Consensus       159 ~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~--f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       159 GLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRL--FDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHH--hcCCccHHHHHHHHHHHeeeEe
Confidence            34456666678888999888888999999999999999999  9999999999999999888643

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=88.76  E-value=1.4  Score=40.43  Aligned_cols=66  Identities=17%  Similarity=0.255  Sum_probs=57.2

Q ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhcc
Q 019428          239 MATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLP  304 (341)
Q Consensus       239 ~~~~l~~~~~~~~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~~  304 (341)
                      +|-..+....+.++..++|+...+.--.--+++-++|..+++..++..||+|+..+..|+......
T Consensus        94 l~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~  159 (372)
T KOG3912|consen   94 LCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL  159 (372)
T ss_pred             HHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence            444556677788888999999999988889999999999999999999999999999999876544

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=88.38  E-value=0.17  Score=45.35  Aligned_cols=132  Identities=17%  Similarity=0.146  Sum_probs=75.1

Q ss_pred             HHHHHHHHHHHHHhHHHHHHHHhhhCCCCChHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHHHHHHHHH
Q 019428          162 GVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMAT  241 (341)
Q Consensus       162 G~~l~l~a~~~~al~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~l~l~~~~~  241 (341)
                      +++.+++-++.|+..-....|.-     -.|.++..-+.+-++.+.+...+...+..        +...+..=++++..=
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~G-----G~p~qQ~lGtT~GALifaiiv~~~~~p~~--------T~~~~iv~~isG~~W   69 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKFG-----GKPYQQTLGTTLGALIFAIIVFLFVSPEL--------TLTIFIVGFISGAFW   69 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeecC-----CChhHhhhhccHHHHHHHHHHheeecCcc--------chhhHHHHHHhhhHh
Confidence            45667777888887665544422     13566665544433322222212111100        111121112233333


Q ss_pred             HHHHHHHHHHHHHhhHHHHHHHHHH-HHHHHHHHHHHhhCCCcchhh----hHHHHHHHHHHHHHhccCC
Q 019428          242 FIGQVSVLSLIALFGAATTAMVTTA-RKAVTLLLSYLIFTKPLTEQH----GTGLLLIAMGITLKLLPAD  306 (341)
Q Consensus       242 ~l~~~~~~~~i~~~sa~t~si~~~l-~~v~~ills~~~f~e~~t~~~----~iG~~lil~Gv~~y~~~k~  306 (341)
                      .++|...|.+++..|-..+.-+++- .-+-+.++|++.|||=-++.+    .+..++++.|+.+-++.++
T Consensus        70 s~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~  139 (288)
T COG4975          70 SFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR  139 (288)
T ss_pred             hhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence            5678888888888887776665554 556788999999999655543    3456677788777666554

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=87.58  E-value=7.6  Score=36.07  Aligned_cols=72  Identities=10%  Similarity=0.189  Sum_probs=64.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhccCCCC
Q 019428          237 EAMATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADDK  308 (341)
Q Consensus       237 ~~~~~~l~~~~~~~~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~~k~~~  308 (341)
                      .++...++..+.+.++|+.|=-+..+.-.-|-+..++.+.++.+.+.++...+=..++-.|+.++...+...
T Consensus        89 is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~  160 (327)
T KOG1581|consen   89 ISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSD  160 (327)
T ss_pred             HHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCC
Confidence            346666777888899999999999999999999999999999999999999999999999999998886554

>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional

Probab=87.13  E-value=20  Score=31.34  Aligned_cols=34  Identities=21%  Similarity=0.237  Sum_probs=21.9

Q ss_pred             HHHHHhhCCCcchhhhHHHHHHHHHHHHHhccCC
Q 019428          273 LLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPAD  306 (341)
Q Consensus       273 lls~~~f~e~~t~~~~iG~~lil~Gv~~y~~~k~  306 (341)
                      .+|..+|++-.=+...+|.++..+=+..-...++
T Consensus       134 ~iG~~L~t~y~l~fe~~silLLvAmIGAI~La~~  167 (198)
T PRK06638        134 AIGILLFTDYLLPFELASVLLLVAMVGAIVLARR  167 (198)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence            3466777777778888888776554444444443

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=86.09  E-value=1  Score=40.16  Aligned_cols=65  Identities=15%  Similarity=0.217  Sum_probs=55.9

Q ss_pred             HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhccCCC
Q 019428          243 IGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPADD  307 (341)
Q Consensus       243 l~~~~~~~~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~~k~~  307 (341)
                      ++....+.+++...=-|.-+--..||+-.+++|+.+.+++.+|....=..+++.|+.++.+-..|
T Consensus        97 lAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~K  161 (337)
T KOG1580|consen   97 LAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENK  161 (337)
T ss_pred             HHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccc
Confidence            34456678888888777778888999999999999999999999999999999999999875444

>PRK01637 hypothetical protein; Reviewed

Probab=83.94  E-value=2.8  Score=38.78  Aligned_cols=20  Identities=5%  Similarity=-0.282  Sum_probs=12.8

Q ss_pred             hhhhHHHHHHHHHHHHHhcc
Q 019428          285 EQHGTGLLLIAMGITLKLLP  304 (341)
Q Consensus       285 ~~~~iG~~lil~Gv~~y~~~  304 (341)
                      |.++.+.++.+++-+-..+.
T Consensus       248 Wlyl~~~ilL~Gaelna~~~  267 (286)
T PRK01637        248 WVYLSWCIVLLGAEITATLG  267 (286)
T ss_pred             HHHHHHHHHHHHHHHHHHHH
Confidence            45677777777776655543

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=82.75  E-value=0.97  Score=39.20  Aligned_cols=63  Identities=11%  Similarity=0.125  Sum_probs=57.0

Q ss_pred             HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhccC
Q 019428          243 IGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPA  305 (341)
Q Consensus       243 l~~~~~~~~i~~~sa~t~si~~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~~k  305 (341)
                      .+++.+..++++.+|+.++-+...+..+.-+++++.++|++....++..++.+.|+.+..+..
T Consensus        65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~D  127 (290)
T KOG4314|consen   65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYAD  127 (290)
T ss_pred             cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEecc
Confidence            456777889999999999999999999999999999999999999999999999998776644

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	341
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.1 bits (103), Expect = 6e-05
 Identities = 56/368 (15%), Positives = 97/368 (26%), Gaps = 115/368 (31%)

Query: 24  FALL---GSSLVISSMASARLQFSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVK 80
           F  L      +V   +    L+ +Y +                       +M+P KT  +
Sbjct: 68  FWTLLSKQEEMVQKFVEEV-LRINYKF-----------------------LMSPIKTEQR 103

Query: 81  LSAVLMGSHGLTKGSLAFLNYPAQL--MFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSAL 138
                       + S+    Y  Q   ++   +V         +    R  P  +   AL
Sbjct: 104 ------------QPSMMTRMYIEQRDRLYNDNQVFAKY----NVS---RLQPYLKLRQAL 144

Query: 139 --------LLVVG--------LILFTLADAQTSPNFSMIGV--IMISGALIMDSFLGNLQ 180
                   +L+ G        + L      +         +  + +      ++ L  LQ
Sbjct: 145 LELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDF-KIFWLNLKNCNSPETVLEMLQ 203

Query: 181 EAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNS--CSQHLYVYGVLVFEA 238
           + ++ ++P  T            + + I          +A          Y   +LV   
Sbjct: 204 KLLYQIDPNWTSR----SDHSSNIKLRI-------HSIQAELRRLLKSKPYENCLLVLL- 251

Query: 239 MATFIGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFT--------KPLTEQHGTG 290
                  V        F  +   ++TT  K VT  LS    T          LT      
Sbjct: 252 ------NVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKS 305

Query: 291 LLLIAMGITLKLLPADDKPI-------------KRTATSSF--KVNIRKL-----SFSER 330
           LLL  +    + LP +                    AT      VN  KL     S    
Sbjct: 306 LLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNV 365

Query: 331 EEADEEKR 338
            E  E ++
Sbjct: 366 LEPAEYRK 373

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	341
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.83
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.25
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.16
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	97.92

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.83  E-value=6.8e-09  Score=84.17  Aligned_cols=70  Identities=16%  Similarity=0.144  Sum_probs=51.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHHHHH-HHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhccC
Q 019428          236 FEAMATFIGQVSVLSLIALFGAATTAMV-TTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPA  305 (341)
Q Consensus       236 l~~~~~~l~~~~~~~~i~~~sa~t~si~-~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~~k  305 (341)
                      +..++..+++.++..++++.++..+..+ ..+.|+++.++|+++|||++|+.+++|+++++.|+++.+..+
T Consensus        35 l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            3446667888999999999999988777 899999999999999999999999999999999999987644

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.25  E-value=6.5e-06  Score=64.05  Aligned_cols=68  Identities=16%  Similarity=0.174  Sum_probs=59.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhHHHHHHH-HHHHHHHHHHHHHHhhCCCcchhhhHHHHHHHHHHHHHhccC
Q 019428          238 AMATFIGQVSVLSLIALFGAATTAMV-TTARKAVTLLLSYLIFTKPLTEQHGTGLLLIAMGITLKLLPA  305 (341)
Q Consensus       238 ~~~~~l~~~~~~~~i~~~sa~t~si~-~~l~~v~~ills~~~f~e~~t~~~~iG~~lil~Gv~~y~~~k  305 (341)
                      .++..+++.++..++|+.+...+..+ ..+.|+.+.++|+++|||++|+.+++|+.+++.|+...+..+
T Consensus        37 ~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            44556777888889999999888666 899999999999999999999999999999999999887643

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.16  E-value=1e-05  Score=62.98  Aligned_cols=71  Identities=11%  Similarity=0.198  Sum_probs=62.8

Q ss_pred             HHHHHHHHhhHHHHHHhhcCCchhHHHHH-hhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHHhccC
Q 019428           79 VKLSAVLMGSHGLTKGSLAFLNYPAQLMF-KSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLAD  151 (341)
Q Consensus        79 ~~~~~~~~~~~~l~~~sl~~is~~~~~l~-ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~~~~  151 (341)
                      +...+++..+..+...++++.+.+.+..+ ....|+.+.++++++  +||++++.|++++.++++|+.+....+
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~--~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGF--FGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            33345678889999999999999988766 899999999999999  999999999999999999999987654

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=97.92  E-value=1.1e-05  Score=65.23  Aligned_cols=68  Identities=10%  Similarity=0.202  Sum_probs=50.1

Q ss_pred             HHHHHhhHHHHHHhhcCCchhHHHHH-hhcchHHHHHHHHhhcccccccChhHHHHHHHHHHHHHHHhccC
Q 019428           82 SAVLMGSHGLTKGSLAFLNYPAQLMF-KSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLAD  151 (341)
Q Consensus        82 ~~~~~~~~~l~~~sl~~is~~~~~l~-ks~~pv~v~ll~~l~~~~~~k~s~~~~~~l~l~~~Gv~l~~~~~  151 (341)
                      .++++++..+.+.++++++.+.+..+ ....|++++++++++  ++|++++.++++++++++|+.+....+
T Consensus        37 i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~--lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGF--FGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHH--HC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            44688999999999999999977666 899999999999999  999999999999999999999987644

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00