Citrus Sinensis ID: 019675

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------
Protein Sequence
MAASVDTIESPSQVNRQEVTSFMGTSPLYSPSSDKRYWSNLRSRIDSILEDRDRKALNGQKRENKEESSRAKRLKEDSQLLLRGFDSVAHTLSQLYNNLDSALQGARDLAKPPTFTDIFHSNLNNSENKEEDSRKQQHQEGNKKGLKRKFDSNESSDDQGDDSQKKDGPSPKDKIMKKAKNLAISMATKAATLARELKSIKSDLCFMQERCTLLEEENRRLRDGFVKGIRPEEDDLVRLQLEALLAEKSRLANENASLVRENQCLHQLVEYHQLTSQDLSASYEEFIQGMYLDFSSPSSAKSGETGNDADYQGIQTPRTNIFDLPSTSFNESFREEP
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccHHHccccccHHHHHccccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHcccccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHcccccHHHHHHccccHccccHHHHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHcHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
maasvdtiespsqvnrQEVTsfmgtsplyspssdkryWSNLRSRIDSILEDrdrkalngqkrenKEESSRAKRLKEDSQLLLRGFDSVAHTLSQLYNNLDSALQGardlakpptftdifhsnlnnsenkeedSRKQQHQEgnkkglkrkfdsnessddqgddsqkkdgpspkdKIMKKAKNLAISMATKAATLARELKSIKSDLCFMQERCTLLEEENRRLRDgfvkgirpeeDDLVRLQLEALLAEKSRLANENASLVRENQCLHQLVEYHQLTSQDLSASYEEFIQGMyldfsspssaksgetgndadyqgiqtprtnifdlpstsfnesfreep
Flexible Loop (DISEMBL)
maasvdtiespsqvnrqevtsfmgtsplyspssdkrywSNLRSRIdsiledrdrkalngqkrenkeessrakrlkedsQLLLRGFDSVAHTLSQLYNNLDSALQGARDLAKPPTFTDIFHSnlnnsenkeedsrkqqhqegnkkglkrkfdsnessddqgddsqkkdgpspkdKIMKKAKNLAISMATKAATLARELKSIKSDLCFMQERCTLleeenrrlrdgfvkgirpeeddLVRLQLEALLAEKSRLANENASLVRENQCLHQLVEYHQLTSQDLSASYEEFIQGMYLDFSSPSSAKSGETGNDADYQgiqtprtnifdlpstsfnesfreep
Low Complexity Region (SEG)
MAASVDTIESPSQVNRQEVTSFMGTSPLYSPSSDKRYWSNLRSRIDSILEDRDRKALNGQKRENKEESSRAKRLKEDSQLLLRGFDSVAHTLSQLYNNLDSALQGARDLAKPPTFTDIFHSNLNNSENKEEDSRKQQHQEGNKKGLKRKFDSNEssddqgddsqkkdgPSPKDKIMKKAKNLAISMATKAATLARELKSIKSDLCFMQERCTLLEEENRRLRDGFVKGIRPEEDDLVRLQLEALLAEKSRLANENASLVRENQCLHQLVEYHQLTSQDLSASYEEFIQGMYLDFSSPSSAKSGETGNDADYQGIQTPRTNIFDLPSTSFNESFREEP
Disordered region (IsUnstruct)
*******************************************************************************LLLRGFDSVAHTLSQLYNNLDSAL***********************************************************************************ATKAATLARELKSIKSDLCFMQERCTLLEEENRRLRDGFVKGIRPEEDDLVRLQLEALLAEKSRLANENASLVRENQCLHQLVEYHQLTSQDLSASYEEFIQGMYLDF*******************************************
Disordered Region (DISOPRED)
************************************YWSNLRSRIDSIL***************************************AHTLSQLYNNLDSALQGARDLAKPPTFTD***************************************************************NLAISMATKAATLARELKSIKSDLCFMQERCT***********************LVRLQLEALLAE********ASLVRENQCLHQLVEYHQLTSQDLSASYEEFIQGMY******************************FDLPSTSF********
Disordered Region (DISEMBL)
**************NRQEVTSFMGTSPLYSPSSDKRYWSNLRSRIDSILEDRDRKALN****************KEDSQLLLRGFDSVAHTLSQLYNNLDSALQGARDLAKPPTFTDIFHSNLNN***********************************************DKIMKKAKNLAISMATKAATLARELKSIKSDLCFMQERCTLLEEENRRLRDGFVKGIRPEEDDLVRLQLEALLAEKSRLANENASLVRENQCLHQLVEYHQLTSQDLSASYEEFIQGMYLDFSS**********NDADYQGIQTPRTNIFDLPSTS*********
Disordered Region (DISPRO)
*******************************SSDKRYWSNLRSRIDSILEDR**********************KEDSQLLLRGFDSVAHTLSQLYNNLDSALQGARDLAKPPTFTDIFHSNL*************************************************DKIMKKAKNLAISMATKAATLARELKSIKSDLCFMQERCTLLEEENRRLRDGFVKGIRPEEDDLVRLQLEALLAEKSRLANENASLVRENQCLHQLVEYHQLTSQDLSASYEEFIQGMYLDFS******************************ST*FNESF****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAASVDTIESPSQVNRQEVTSFMGTSPLYSPSSDKRYWSNLRSRIDSILEDRDRKAxxxxxxxxxxxxxxxxxxxxxSQLLLRGFDSVAHTLSQLYNNLDSALQGARDLAKPPTFTDIFHSNLNNSENKEEDSRKQQHQEGNKKGLKRKFDSNESSDDQGDDSQKKDGPSPKDKIMKKAKNLAISMATKAATLARELKSIKSDLCFMQERCTLLEEENRRLRDGFVKGIRPEEDDLVRLQxxxxxxxxxxxxxxxxxxxxxNQCLHQLVEYHQLTSQDLSASYEEFIQGMYLDFSSPSSAKSGETGNDADYQGIQTPRTNIFDLPSTSFNESFREEP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	337
225436926	341	PREDICTED: uncharacterized protein LOC10	0.982	0.970	0.649	1e-117
255559450	357	conserved hypothetical protein [Ricinus	0.988	0.932	0.639	1e-116
224062525	318	predicted protein [Populus trichocarpa]	0.899	0.952	0.614	1e-100
449521126	335	PREDICTED: uncharacterized LOC101222797	0.970	0.976	0.590	5e-98
449444665	335	PREDICTED: uncharacterized protein LOC10	0.970	0.976	0.587	3e-97
356572184	340	PREDICTED: uncharacterized protein LOC10	0.940	0.932	0.626	5e-95
255648193	340	unknown [Glycine max]	0.940	0.932	0.608	1e-94
297814023	333	hypothetical protein ARALYDRAFT_911921 [	0.860	0.870	0.595	4e-87
18412048	333	uncharacterized protein [Arabidopsis tha	0.857	0.867	0.599	4e-84
224085457	296	predicted protein [Populus trichocarpa]	0.860	0.979	0.591	9e-84

>gi|225436926|ref|XP_002275123.1| PREDICTED: uncharacterized protein LOC100261455 [Vitis vinifera] gi|296086700|emb|CBI32335.3| unnamed protein product [Vitis vinifera]

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 222/342 (64%), Positives = 271/342 (79%), Gaps = 11/342 (3%)

Query: 1   MAASVDTIESPSQVNRQEVTSFMGTSPLYSPSSDKRYWSNLRSRIDSILEDRDRKALNGQ 60
           MA SV++  +P+ +++ E T  MG+SPL +PSSDKR+WS LRSR+D++LE+R  +  +GQ
Sbjct: 1   MAISVES-PAPTHLSK-ESTGSMGSSPLLTPSSDKRFWSTLRSRVDALLEERKCEFSSGQ 58

Query: 61  KRENKEESSRAKRLKEDSQLLLRGFDSVAHTLSQLYNNLDSALQGARDLAKPPTFTDIFH 120
              +  ES R  RLKEDS LLLRGFDS++H+LSQL NNLD+ALQGAR +AKPPT TDIFH
Sbjct: 59  TGVSVGESDRGNRLKEDSLLLLRGFDSISHSLSQLTNNLDNALQGARSIAKPPTLTDIFH 118

Query: 121 SNLNNSENKEEDSRKQQHQEGNKKGLKRKFDSNESSDDQGDDSQKKDGPSPKDKIMKKAK 180
            NL  S+ KEE S K+   E +K+GLKRK D NE S+DQG +SQ+++  SP +  +KKAK
Sbjct: 119 CNLEKSKGKEEVSEKEDDDEESKRGLKRKLDGNEGSEDQGGNSQRENEQSPGEGKLKKAK 178

Query: 181 NLAISMATKAATLARELKSIKSDLCFMQERCTLLEEENRRLRDGFVKGIRPEEDDLVRLQ 240
           NLAISMATKAA+LARELKSIKSDLCFMQERC LLEEEN RLRDGFVKG+RPEEDDLVRLQ
Sbjct: 179 NLAISMATKAASLARELKSIKSDLCFMQERCALLEEENSRLRDGFVKGMRPEEDDLVRLQ 238

Query: 241 LEALLAEKSRLANENASLVRENQCLHQLVEYHQLTSQDLSASYEEFIQGMYLDFSSP--- 297
           LEALLAEKSRLANENA+L RENQCLHQLVEYHQLTSQDLSA+YE+ IQGM LDFSSP   
Sbjct: 239 LEALLAEKSRLANENANLTRENQCLHQLVEYHQLTSQDLSATYEQVIQGMCLDFSSPPPS 298

Query: 298 ----SSAKSGETGNDADYQGIQTPRTNIFDLPSTSFNESFRE 335
               ++++ G++ +DA+    +TP T IF L ST  +E + E
Sbjct: 299 IPEEANSRDGDS-DDANNGAPETPPTKIFGL-STVLDECYDE 338

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255559450|ref|XP_002520745.1| conserved hypothetical protein [Ricinus communis] gi|223540130|gb|EEF41707.1| conserved hypothetical protein [Ricinus communis]

 Score =  424 bits (1089), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 229/358 (63%), Positives = 274/358 (76%), Gaps = 25/358 (6%)

Query: 1   MAASVDTIESPSQVNRQEVTSFMGTSPLYSPSSDKRYWSNLRSRIDSILEDRDRKALNGQ 60
           MAASVD+  SPS VN+ E TSF  +SPL+SP+SDKR+WS+LRSRIDS+LE+R  K    Q
Sbjct: 1   MAASVDS-PSPSHVNK-ENTSFTVSSPLFSPASDKRFWSSLRSRIDSLLENRQCKVSIAQ 58

Query: 61  KRENKE------------ESSRAKRLKEDSQLLLRGFDSVAHTLSQLYNNLDSALQGARD 108
            + + +            ES RAKR+KEDS LL+RGFDS+AHTLSQL NNLD+ALQGAR 
Sbjct: 59  DQLDPDPASTSAHLSVIGESDRAKRMKEDSLLLIRGFDSIAHTLSQLSNNLDNALQGARY 118

Query: 109 LAKPPTFTDIFHSNLNNSENKEEDSRKQQHQEG---------NKKGLKRKFDSNESSDDQ 159
           L++PPT ++IF SNL N+E K+ED  KQQ++             KGLKRKFD   +S DQ
Sbjct: 119 LSEPPTLSEIFRSNLQNAEIKQEDLEKQQNRGKEEQKGEGEETNKGLKRKFDQTGNSVDQ 178

Query: 160 GDDSQKKDGPSPKDKIMKKAKNLAISMATKAATLARELKSIKSDLCFMQERCTLLEEENR 219
             DSQK+   SPKD  +KKAKNLA+SMATKAA+LARELKS++SDLCF+QERC+LLEEENR
Sbjct: 179 ESDSQKETEESPKDNKLKKAKNLAVSMATKAASLARELKSLRSDLCFVQERCSLLEEENR 238

Query: 220 RLRDGFVKGIRPEEDDLVRLQLEALLAEKSRLANENASLVRENQCLHQLVEYHQLTSQDL 279
           RLRDGF KGIRPEEDDL+RLQ+EALLAEKSRLANENA+L+RENQCLHQLVEYHQLTS DL
Sbjct: 239 RLRDGFSKGIRPEEDDLMRLQMEALLAEKSRLANENANLIRENQCLHQLVEYHQLTSHDL 298

Query: 280 SASYEEFIQGMYLDFSSP-SSAKSGETGNDADYQGIQTPRTNIFDLPSTSFNESFREE 336
           SASY++ IQGM LDFSSP  S K  +  N+A+ + +QTP TNI    STS  + F EE
Sbjct: 299 SASYDQLIQGMCLDFSSPLPSPKEEKEHNEAEKEDLQTPGTNILGF-STSLEKCFHEE 355

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224062525|ref|XP_002300847.1| predicted protein [Populus trichocarpa] gi|222842573|gb|EEE80120.1| predicted protein [Populus trichocarpa]

 Score =  370 bits (949), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 199/324 (61%), Positives = 245/324 (75%), Gaps = 21/324 (6%)

Query: 23  MGTSPLYSPSSDKRYWSNLRSRIDSILEDRDRK-ALNGQKRENKEESSRAKRLKEDSQLL 81
           M +SPL+SP SDKR+WS LRSR+ ++LE+R R  ++ G       ES RAKR+KEDS LL
Sbjct: 1   MVSSPLFSPDSDKRFWSALRSRMGTLLENRQRHVSIAG-------ESDRAKRMKEDSLLL 53

Query: 82  LRGFDSVAHTLSQLYNNLDSALQ----------GARDLAKPPTFTDIFHSNLNNSENKEE 131
           LRGFDS++  LSQL NNLD+ALQ           +R LA+PPT  +IFHS L +SE K E
Sbjct: 54  LRGFDSISQNLSQLSNNLDNALQVDGNSFQSFKTSRHLAEPPTLREIFHSVLEDSEIKRE 113

Query: 132 DSRKQQHQEGNKKGLKRKFDSNESSDDQGDDSQKKDGPSPKDKIMKKAKNLAISMATKAA 191
           D  K Q++E  KK LKRKFD ++ S+DQ +D  K +    ++K +K+AKNLA+SMATKAA
Sbjct: 114 DEEKLQNEEEGKKVLKRKFDPDDRSEDQENDFHKGNEQCLENKRLKRAKNLAVSMATKAA 173

Query: 192 TLARELKSIKSDLCFMQERCTLLEEENRRLRDGFVKGIRPEEDDLVRLQLEALLAEKSRL 251
            LARELKSI+SDLCFMQERC LLEEENRR+RDGF +G RPEEDDL+RLQ+EALLAEKSRL
Sbjct: 174 ALARELKSIRSDLCFMQERCALLEEENRRIRDGFCEGTRPEEDDLMRLQMEALLAEKSRL 233

Query: 252 ANENASLVRENQCLHQLVEYHQLTSQDLSASYEEFIQGMYLDFSSPSSAKSGETGNDADY 311
           ANENA+L RENQCLHQLVEYHQ+T+QDLSASYE+ I+GM LDFSSPSS  S    N+ D 
Sbjct: 234 ANENANLKRENQCLHQLVEYHQITTQDLSASYEQVIRGMCLDFSSPSS--SIMEDNEDDC 291

Query: 312 QGIQTPRTNIFDLPSTSFNESFRE 335
           +  +TP+ N+F   +TS +ES  E
Sbjct: 292 EIAKTPQKNVFGF-ATSIDESCYE 314

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449521126|ref|XP_004167582.1| PREDICTED: uncharacterized LOC101222797 [Cucumis sativus]

 Score =  363 bits (933), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 202/342 (59%), Positives = 256/342 (74%), Gaps = 15/342 (4%)

Query: 1   MAASVDTIESPSQVNRQEVTSFMGTSPLYSPSSDKRYWSNLRSRIDSILEDRDRKALNGQ 60
           MA SVD   SPS  N  +     G+  L SP+SDKR+WS LR R+DS+L++R  K+ N  
Sbjct: 1   MAPSVD-FHSPSSSNPTQ-----GSPSLSSPASDKRFWSLLRGRVDSLLQERVAKSSNLD 54

Query: 61  KRENKE---ESSRAKRLKEDSQLLLRGFDSVAHTLSQLYNNLDSALQGARDLAKPPTFTD 117
              +     ++ RAKRLK+DS LLLRGFDS+ +TLSQL NNLD+ALQGARDL K PT T+
Sbjct: 55  PSMSDHFLGKAERAKRLKQDSLLLLRGFDSLGYTLSQLSNNLDNALQGARDLVKAPTLTE 114

Query: 118 IFHSNLNNSENKEEDSRKQQHQEGN-KKGLKRKFDSNESSDDQGDDSQKKDGPSPKDKIM 176
           IF +NL NSE++E+DS+ ++++    K+  KRKFD +  S++     +K++  + KDKI 
Sbjct: 115 IFQNNLKNSEDEEDDSKGKENELVEPKQATKRKFDDSHCSEESDVSLEKENQQNHKDKI- 173

Query: 177 KKAKNLAISMATKAATLARELKSIKSDLCFMQERCTLLEEENRRLRDGFVKGIRPEEDDL 236
           KKAKNLA++MATK+A LARELKS+KS+LCFMQERC++LEEENRRLRDGF +G+RPEEDDL
Sbjct: 174 KKAKNLAVAMATKSAFLARELKSLKSNLCFMQERCSVLEEENRRLRDGFSRGVRPEEDDL 233

Query: 237 VRLQLEALLAEKSRLANENASLVRENQCLHQLVEYHQLTSQDLSASYEEFIQGMYLDFSS 296
           VRLQ+EALLAEKSRLANENA+L RENQCLHQLVEYHQLTSQDLS SYEE IQGM LDFSS
Sbjct: 234 VRLQMEALLAEKSRLANENANLTRENQCLHQLVEYHQLTSQDLSLSYEEVIQGMCLDFSS 293

Query: 297 PSSAKS---GETGNDADYQGIQTPRTNIFDLPSTSFNESFRE 335
           P  A +    E    +D +  +TP+ ++F   STS +E  +E
Sbjct: 294 PPPAIAEGDEEEQEQSDKEITRTPKADLFSF-STSLDELHQE 334

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449444665|ref|XP_004140094.1| PREDICTED: uncharacterized protein LOC101222797 [Cucumis sativus]

 Score =  361 bits (927), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 201/342 (58%), Positives = 255/342 (74%), Gaps = 15/342 (4%)

Query: 1   MAASVDTIESPSQVNRQEVTSFMGTSPLYSPSSDKRYWSNLRSRIDSILEDRDRKALNGQ 60
           MA SVD   SPS  N  +     G+  L SP+SDKR+WS LR R+DS+L++R  K+ N  
Sbjct: 1   MAPSVD-FHSPSSSNPTQ-----GSPSLSSPASDKRFWSLLRGRVDSLLQERVAKSSNLD 54

Query: 61  KRENKE---ESSRAKRLKEDSQLLLRGFDSVAHTLSQLYNNLDSALQGARDLAKPPTFTD 117
              +     ++ RAKRLK+DS LLLRGFDS+ +TLSQL NNLD+ALQGARDL K PT T+
Sbjct: 55  PSMSDHFLGKAERAKRLKQDSLLLLRGFDSLGYTLSQLSNNLDNALQGARDLVKAPTLTE 114

Query: 118 IFHSNLNNSENKEEDSRKQQHQEGN-KKGLKRKFDSNESSDDQGDDSQKKDGPSPKDKIM 176
           IF +NL NSE++E+DS+ ++++    K+  KRKFD +   ++     +K++  + KDKI 
Sbjct: 115 IFQNNLKNSEDEEDDSKGKENELVEPKQATKRKFDDSHCLEESDVSLEKENQQNHKDKI- 173

Query: 177 KKAKNLAISMATKAATLARELKSIKSDLCFMQERCTLLEEENRRLRDGFVKGIRPEEDDL 236
           KKAKNLA++MATK+A LARELKS+KS+LCFMQERC++LEEENRRLRDGF +G+RPEEDDL
Sbjct: 174 KKAKNLAVAMATKSAFLARELKSLKSNLCFMQERCSVLEEENRRLRDGFSRGVRPEEDDL 233

Query: 237 VRLQLEALLAEKSRLANENASLVRENQCLHQLVEYHQLTSQDLSASYEEFIQGMYLDFSS 296
           VRLQ+EALLAEKSRLANENA+L RENQCLHQLVEYHQLTSQDLS SYEE IQGM LDFSS
Sbjct: 234 VRLQMEALLAEKSRLANENANLTRENQCLHQLVEYHQLTSQDLSLSYEEVIQGMCLDFSS 293

Query: 297 PSSAKS---GETGNDADYQGIQTPRTNIFDLPSTSFNESFRE 335
           P  A +    E    +D +  +TP+ ++F   STS +E  +E
Sbjct: 294 PPPAIAEGDEEEQEQSDKEITRTPKADLFSF-STSLDELHQE 334

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356572184|ref|XP_003554250.1| PREDICTED: uncharacterized protein LOC100783134 [Glycine max]

 Score =  353 bits (907), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 208/332 (62%), Positives = 249/332 (75%), Gaps = 15/332 (4%)

Query: 1   MAASVDTIESPSQV--NRQEVTSFMG--TSPLYSPSSDKRYWSNLRSRIDSILEDRDRKA 56
           M  S++T  SP  +  N QE    MG  +SPL+SPSSDKR+WS LRSRID++L+ R  + 
Sbjct: 1   MTTSLETPPSPLDLHNNSQEGMRVMGYFSSPLFSPSSDKRFWSTLRSRIDALLDARQSET 60

Query: 57  LNGQKRENKEESSRAKRLKEDSQLLLRGFDSVAHTLSQLYNNLDSALQGARDLAKPPTFT 116
            +     N++ ++R   LKEDS LL+RGFDSVAHTLS L NNLD+AL GAR+LA PPT T
Sbjct: 61  -STHSPTNEQGNNR---LKEDSMLLMRGFDSVAHTLSLLSNNLDNALHGARELANPPTLT 116

Query: 117 DIFHSNLNNSENKEEDSRKQQHQEGNKKGLKRKFDSNESSDDQGDDSQKKD-GPSPKDKI 175
           DIFHS  +  ENKE+   KQ+ +E +K+G+KRKFD N+ S++   DSQK++ G    D  
Sbjct: 117 DIFHSKYDKVENKEDSGEKQKEEEESKQGMKRKFDPNDVSEENAVDSQKEENGKKMMDTN 176

Query: 176 MKKAKNLAISMATKAATLARELKSIKSDLCFMQERCTLLEEENRRLRDGFVKGIRPEEDD 235
           +KKAKNLA+SMATKAA+LARELKSIKSDLCFMQERC LLEEENRRLRDGF KG+RPEEDD
Sbjct: 177 IKKAKNLAVSMATKAASLARELKSIKSDLCFMQERCGLLEEENRRLRDGFAKGVRPEEDD 236

Query: 236 LVRLQLEALLAEKSRLANENASLVRENQCLHQLVEYHQLTSQDLS-ASYEEFIQGMYLDF 294
           LVRLQLEALLAEKSRLANENA+LVRENQCLHQLVEYHQL SQDLS  SYE  +QGMYLDF
Sbjct: 237 LVRLQLEALLAEKSRLANENANLVRENQCLHQLVEYHQLASQDLSDESYEHALQGMYLDF 296

Query: 295 SS-----PSSAKSGETGNDADYQGIQTPRTNI 321
           SS     P   + G+   D + +   T R +I
Sbjct: 297 SSPPPTIPEETRDGDGDEDENGEPTHTRRNHI 328

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255648193|gb|ACU24550.1| unknown [Glycine max]

 Score =  352 bits (903), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 202/332 (60%), Positives = 241/332 (72%), Gaps = 15/332 (4%)

Query: 1   MAASVDTIESPSQV--NRQEVTSFMGTSPLYSPSS--DKRYWSNLRSRIDSILEDRDRKA 56
           M  S++T  SP  +  N QE    MG+      S   DKR WS LRSRID++L+ R  + 
Sbjct: 1   MTTSLETPPSPLDLHNNSQEGMRVMGSFSSPLFSPSSDKRSWSTLRSRIDALLDARQSET 60

Query: 57  LNGQKRENKEESSRAKRLKEDSQLLLRGFDSVAHTLSQLYNNLDSALQGARDLAKPPTFT 116
            +     N++ ++R   LKEDS LL+RGFDSVAHTLS L NNLD+AL GAR+LA PPT T
Sbjct: 61  -STHSPTNEQGNNR---LKEDSMLLMRGFDSVAHTLSLLSNNLDNALHGARELANPPTLT 116

Query: 117 DIFHSNLNNSENKEEDSRKQQHQEGNKKGLKRKFDSNESSDDQGDDSQKKD-GPSPKDKI 175
           DIFHS  +  ENKE+   KQ+ +E +K+G+KRKFD N+ S++   DSQK++ G    D  
Sbjct: 117 DIFHSKFDKVENKEDSGEKQKEEEESKQGMKRKFDPNDVSEENAVDSQKEENGKKMMDTN 176

Query: 176 MKKAKNLAISMATKAATLARELKSIKSDLCFMQERCTLLEEENRRLRDGFVKGIRPEEDD 235
           +KKAKNLA+SMATKAA+LARELKSIKSDLCFMQERC LLEEENRRLRDGF KG+RPEEDD
Sbjct: 177 IKKAKNLAVSMATKAASLARELKSIKSDLCFMQERCGLLEEENRRLRDGFAKGVRPEEDD 236

Query: 236 LVRLQLEALLAEKSRLANENASLVRENQCLHQLVEYHQLTSQDLS-ASYEEFIQGMYLDF 294
           LVRLQLEALLAEKSRLANENA+LVRENQCLHQLVEYHQL SQDLS  SYE  +QGMYLDF
Sbjct: 237 LVRLQLEALLAEKSRLANENANLVRENQCLHQLVEYHQLASQDLSDESYEHALQGMYLDF 296

Query: 295 SS-----PSSAKSGETGNDADYQGIQTPRTNI 321
           SS     P   + G+   D + +   T R +I
Sbjct: 297 SSPPPTIPEETRDGDGDEDENGEPTHTRRNHI 328

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297814023|ref|XP_002874895.1| hypothetical protein ARALYDRAFT_911921 [Arabidopsis lyrata subsp. lyrata] gi|297320732|gb|EFH51154.1| hypothetical protein ARALYDRAFT_911921 [Arabidopsis lyrata subsp. lyrata]

 Score =  327 bits (839), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 181/304 (59%), Positives = 225/304 (74%), Gaps = 14/304 (4%)

Query: 1   MAASVDTIES------PSQVNRQEVTSFMGTSPLYSPSSDKRYWSNLRSRIDSILEDRDR 54
           MAASV+T  +       + +N    TSF  +  + SPSSDKR WSNLR+R+D +LE+  +
Sbjct: 1   MAASVETPSTNHTNYEGTSLNMVSTTSFDSSPSIISPSSDKRLWSNLRNRVDVLLEENSK 60

Query: 55  KALNGQKRENKEESSRAKRLKEDSQLLLRGFDSVAHTLSQLYNNLDSALQGARDLAKPPT 114
                       E+ R+ R K DS LLL+GFDSV+HTLSQL +NLD+ALQG R+LAKPP+
Sbjct: 61  YHKPIAADTIAGETERSMRFKNDSMLLLKGFDSVSHTLSQLSSNLDNALQGVRELAKPPS 120

Query: 115 FTDIFHSNLNNSENKEEDSRKQQHQEGNKKGLKRKFDSNESSDDQGDDSQKKDGPSPKD- 173
            ++I HSNL      ++  R+Q+ +E   KG KRK   +ES  +Q +DS  ++   PK+ 
Sbjct: 121 LSEILHSNLK----ADQIQRQQKEEEEESKGTKRK---HESDIEQKEDSSNEEEKRPKER 173

Query: 174 KIMKKAKNLAISMATKAATLARELKSIKSDLCFMQERCTLLEEENRRLRDGFVKGIRPEE 233
           KIM KAKN+AISMA KA +LARELKSIKSDL F+QERC LLEEEN+RLRDGFVKG+RPEE
Sbjct: 174 KIMNKAKNIAISMAAKANSLARELKSIKSDLSFIQERCGLLEEENKRLRDGFVKGVRPEE 233

Query: 234 DDLVRLQLEALLAEKSRLANENASLVRENQCLHQLVEYHQLTSQDLSASYEEFIQGMYLD 293
           DDLVRLQLE LL EK+RLANENA+LVRENQCLHQ+VEYHQ+TSQDLS SYE+ +QG+ LD
Sbjct: 234 DDLVRLQLEVLLTEKARLANENANLVRENQCLHQMVEYHQITSQDLSPSYEQVVQGLCLD 293

Query: 294 FSSP 297
           FSSP
Sbjct: 294 FSSP 297

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18412048|ref|NP_567246.1| uncharacterized protein [Arabidopsis thaliana] gi|4263510|gb|AAD15336.1| hypothetical protein [Arabidopsis thaliana] gi|7269765|emb|CAB77765.1| hypothetical protein [Arabidopsis thaliana] gi|21593748|gb|AAM65715.1| unknown [Arabidopsis thaliana] gi|115646844|gb|ABJ17137.1| At4g02800 [Arabidopsis thaliana] gi|332656831|gb|AEE82231.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  317 bits (813), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 184/307 (59%), Positives = 231/307 (75%), Gaps = 18/307 (5%)

Query: 1   MAASVDTIESPSQVNRQ-------EVTSFMGTSPLYSPSSDKRYWSNLRSRIDSILEDRD 53
           MAASV+T  SP+  N +         TSF  +SP  SPSSDKR WSN+R+R+D +LE+  
Sbjct: 1   MAASVET-PSPNHTNNEGTRLNMVSATSFDSSSPSVSPSSDKRLWSNVRNRVDVLLEENS 59

Query: 54  RKALNGQKRENKE--ESSRAKRLKEDSQLLLRGFDSVAHTLSQLYNNLDSALQGARDLAK 111
           +   N +   N    ES R+KR K DS LLL+GFDSV+HTLS L +NLD+ALQG R+LAK
Sbjct: 60  K---NHKPVTNTIAIESERSKRFKNDSMLLLKGFDSVSHTLSLLSSNLDNALQGVRELAK 116

Query: 112 PPTFTDIFHSNLNNSENKEEDSRKQQHQEGNKKGLKRKFDSNESSDDQGDDSQKKDGPSP 171
           PP++++I HSNL      ++  R+Q+ ++  ++  K K   +ES  +Q +DS  ++   P
Sbjct: 117 PPSYSEILHSNLK----ADQIQRQQKEEDEEEEESKGKKRKHESDVEQTEDSSNEEEKRP 172

Query: 172 KD-KIMKKAKNLAISMATKAATLARELKSIKSDLCFMQERCTLLEEENRRLRDGFVKGIR 230
           K+ KIMKKAKN+AISMA KA +LARELK+IKSDL F+QERC LLEEEN+RLRDGFVKG+R
Sbjct: 173 KERKIMKKAKNIAISMAAKANSLARELKTIKSDLSFIQERCGLLEEENKRLRDGFVKGVR 232

Query: 231 PEEDDLVRLQLEALLAEKSRLANENASLVRENQCLHQLVEYHQLTSQDLSASYEEFIQGM 290
           PEEDDLVRLQLE LLAEK+RLANENA+LVRENQCLHQ+VEYHQ+TSQDLS SYE+ +QG 
Sbjct: 233 PEEDDLVRLQLEVLLAEKARLANENANLVRENQCLHQMVEYHQITSQDLSPSYEQVVQGF 292

Query: 291 YLDFSSP 297
            LDFSSP
Sbjct: 293 CLDFSSP 299

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224085457|ref|XP_002307581.1| predicted protein [Populus trichocarpa] gi|222857030|gb|EEE94577.1| predicted protein [Populus trichocarpa]

 Score =  316 bits (810), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 185/313 (59%), Positives = 234/313 (74%), Gaps = 23/313 (7%)

Query: 25  TSPLYSPSSDKRYWSNLRSRIDSILEDRDRK-ALNGQKRENKEESSRAKRLKEDSQLLLR 83
           +SPL+ P+SDKR+WS+LR RID++LE+R R  ++ G       ES RAKR+KEDS LLLR
Sbjct: 1   SSPLFCPASDKRFWSSLRGRIDTLLENRHRSVSIVG-------ESDRAKRMKEDSLLLLR 53

Query: 84  GFDSVAHTLSQLYNNLDSALQGARDLAKPPTFTDIFHSNLNNSENKEEDSRKQQHQEGNK 143
           GFDS+A  LSQL +NLD+ALQ             +  ++L NSE ++ED  K++ +EG K
Sbjct: 54  GFDSIAQNLSQLSSNLDNALQ-------------VNGNSLENSEFRQEDVEKEKIEEGKK 100

Query: 144 KGLKRKFDSNESSDDQGDDSQKKDGPSPKDKIMKKAKNLAISMATKAATLARELKSIKSD 203
             LKRKFD ++ S++QG+D  K++    +DK +KKAKNLA+SMATKAA LARELKS+KSD
Sbjct: 101 TRLKRKFDPDDRSEEQGNDFHKENEQCLEDKKLKKAKNLAVSMATKAAALARELKSMKSD 160

Query: 204 LCFMQERCTLLEEENRRLRDGFVKGIRPEEDDLVRLQLEALLAEKSRLANENASLVRENQ 263
            CFMQERC LLEEENRR+RDGF +G RPEEDDL+RLQ+EALLAEKSRL NENA+L RENQ
Sbjct: 161 FCFMQERCALLEEENRRIRDGFCEGTRPEEDDLMRLQMEALLAEKSRLGNENANLKRENQ 220

Query: 264 CLHQLVEYHQLTSQDLSASYEEFIQGMYLDFSSPSSAKSGETGNDADYQGIQTPRTNIFD 323
           CLHQLVEYHQ+T+QDLSASYE+ I+G  LDFSSP+S+      N+ D +  +T   NIF 
Sbjct: 221 CLHQLVEYHQITTQDLSASYEQVIRGTCLDFSSPTSSMMEAADNEDDSEVAKTT-PNIFR 279

Query: 324 LPSTSFNESFREE 336
             +TS +ES  EE
Sbjct: 280 F-ATSLDESCHEE 291

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	337
TAIR|locus:2140195	333	AT4G02800 "AT4G02800" [Arabido	0.857	0.867	0.592	3e-85
TAIR|locus:2198264	389	AT1G30050 "AT1G30050" [Arabido	0.329	0.285	0.553	3.8e-33
TAIR|locus:2185098	351	AT5G01970 [Arabidopsis thalian	0.694	0.666	0.325	1e-29
TAIR|locus:2064342	371	AT2G30530 [Arabidopsis thalian	0.370	0.336	0.492	4.7e-29

TAIR|locus:2140195 AT4G02800 "AT4G02800" [Arabidopsis thaliana (taxid:3702)]

 Score = 853 (305.3 bits), Expect = 3.0e-85, P = 3.0e-85
 Identities = 182/307 (59%), Positives = 225/307 (73%)

Query:     1 MAASVDTIESPSQVNRQ-------EVTSFMGTSPLYSPSSDKRYWSNLRSRIDSILEDRD 53
             MAASV+T  SP+  N +         TSF  +SP  SPSSDKR WSN+R+R+D +LE+  
Sbjct:     1 MAASVET-PSPNHTNNEGTRLNMVSATSFDSSSPSVSPSSDKRLWSNVRNRVDVLLEENS 59

Query:    54 RKALNGQKRENKE--ESSRAKRLKEDSQLLLRGFDSVAHTLSQLYNNLDSALQGARDLAK 111
             +   N +   N    ES R+KR K DS LLL+GFDSV+HTLS L +NLD+ALQG R+LAK
Sbjct:    60 K---NHKPVTNTIAIESERSKRFKNDSMLLLKGFDSVSHTLSLLSSNLDNALQGVRELAK 116

Query:   112 PPTFTDIFHSNLNNSENKEEDSRKQQHQEGNKKGLKRKFDSNEXXXXXXXXXXXXXXPSP 171
             PP++++I HSNL  ++  +   +++  +E   KG KRK +S+                 P
Sbjct:   117 PPSYSEILHSNLK-ADQIQRQQKEEDEEEEESKGKKRKHESD---VEQTEDSSNEEEKRP 172

Query:   172 KD-KIMKKAKNLAISMATKAATLARELKSIKSDLCFMQERCTLLEEENRRLRDGFVKGIR 230
             K+ KIMKKAKN+AISMA KA +LARELK+IKSDL F+QERC LLEEEN+RLRDGFVKG+R
Sbjct:   173 KERKIMKKAKNIAISMAAKANSLARELKTIKSDLSFIQERCGLLEEENKRLRDGFVKGVR 232

Query:   231 PEEDDLVRLQLEALLAEKSRLANENASLVRENQCLHQLVEYHQLTSQDLSASYEEFIQGM 290
             PEEDDLVRLQLE LLAEK+RLANENA+LVRENQCLHQ+VEYHQ+TSQDLS SYE+ +QG 
Sbjct:   233 PEEDDLVRLQLEVLLAEKARLANENANLVRENQCLHQMVEYHQITSQDLSPSYEQVVQGF 292

Query:   291 YLDFSSP 297
              LDFSSP
Sbjct:   293 CLDFSSP 299

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0000226 "microtubule cytoskeleton organization" evidence=RCA

GO:0000911 "cytokinesis by cell plate formation" evidence=RCA

GO:0016572 "histone phosphorylation" evidence=RCA

GO:0042127 "regulation of cell proliferation" evidence=RCA

TAIR|locus:2198264 AT1G30050 "AT1G30050" [Arabidopsis thaliana (taxid:3702)]

 Score = 317 (116.6 bits), Expect = 3.8e-33, Sum P(2) = 3.8e-33
 Identities = 62/112 (55%), Positives = 87/112 (77%)

Query:   169 PSPKDKIMKKAKNLAISMATKAATLARELKSIKSDLCFMQERCTLLEEENRRLRDGFVKG 228
             P+P++  +K ++++A++ A KA  L RELK++K+DL F +ERC+ LEEEN+RLRD   KG
Sbjct:   179 PNPRESQLKASRDVAMATAAKAKLLLRELKTVKADLAFAKERCSQLEEENKRLRDNRDKG 238

Query:   229 IR-PEEDDLVRLQLEALLAEKSRLANENASLVRENQCLHQLVEYHQLTSQDL 279
                P +DDL+RLQLE LLAEK+RLA+EN+   REN+ L ++VEYHQLT QD+
Sbjct:   239 NNNPADDDLIRLQLETLLAEKARLAHENSIYARENRFLREIVEYHQLTMQDV 290

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2185098 AT5G01970 [Arabidopsis thaliana (taxid:3702)]

 Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
 Identities = 81/249 (32%), Positives = 129/249 (51%)

Query:    35 KRYWSNLRSRIDSILED---RDRKALNGQKRENKEESSRAKRLKEDSQLLLRGFDSVAHT 91
             K  W  +  +  S++ED    DR     Q R +       K++  D+  L RG D +  +
Sbjct:    56 KGLWGVIAQKAKSVIEDDKSSDRSTTASQSRFSYLSDEGFKKM--DNPKLRRGLDKLTSS 113

Query:    92 LSQLYNNLDSALQGARDLAKPPTFTDIFHSNLNNSENKEEDSRKQQHQEGNKKGLKRKFD 151
             L+Q+ +  + A +  R L +  T  DI        + +   +  +   +    G+   + 
Sbjct:   114 LNQIGDTFEKAFEDGRTLVENKT-ADIIQET-RKLQTRRRGTGGEDENQNQSYGVSSSWK 171

Query:   152 SNEXXXXXXXXXXXXXXPSPKDKIMKKAKNLAISMATKAATLARELKSIKSDLCFMQERC 211
              +                      +K ++++A++ A KA  L RELK++K+DL F +ERC
Sbjct:   172 KSPEQPMQLNHIEHETQ-------LKASRDVAMATAAKAKLLLRELKTVKADLAFAKERC 224

Query:   212 TLLEEENRRLRDGF-VKGIRPEEDDLVRLQLEALLAEKSRLANENASLVRENQCLHQLVE 270
               LEEEN+ LR+    KG  P ++DL+RLQLE+LLAEK+RLA+EN+   REN+ L ++VE
Sbjct:   225 AQLEEENKHLRESHREKGSNPADEDLIRLQLESLLAEKARLAHENSVYARENRFLREIVE 284

Query:   271 YHQLTSQDL 279
             YHQLT QD+
Sbjct:   285 YHQLTMQDV 293

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2064342 AT2G30530 [Arabidopsis thaliana (taxid:3702)]

 Score = 282 (104.3 bits), Expect = 4.7e-29, Sum P(2) = 4.7e-29
 Identities = 63/128 (49%), Positives = 87/128 (67%)

Query:   176 MKKAKNLAISMATKAATLARELKSIKSDLCFMQERCTLLEEENRRLRDGFVKGIRPEEDD 235
             +K ++++A++MA KA  L RELK +KSDL F ++RC  LEEEN+ LR+      + ++DD
Sbjct:   229 LKASRDVAMAMAAKAKLLLRELKMVKSDLAFAKQRCAQLEEENKVLRENRSGDSQTDDDD 288

Query:   236 LVRLQLEALLAEKSRLANENASLVRENQCLHQLVEYHQLTSQDL---SASYEEFIQGMYL 292
             LVRLQLE LLAEK+RLA+EN+   REN  L  +VEYHQLT QD+       EE  +   +
Sbjct:   289 LVRLQLETLLAEKARLAHENSIYTRENLYLRGVVEYHQLTMQDVVYFDEKTEEVTEVYPI 348

Query:   293 DFSSPSSA 300
             + SS SS+
Sbjct:   349 NVSSMSSS 356

GO:0005634 "nucleus" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	337
PF09755	310	DUF2046: Uncharacterized conserved protein H4 (DUF	93.6
PF05769	181	DUF837: Protein of unknown function (DUF837); Inte	92.27
TIGR02449	65	conserved hypothetical protein TIGR02449. Members	90.25
PF14197	69	Cep57_CLD_2: Centrosome localisation domain of PPC	89.55
TIGR00219	283	mreC rod shape-determining protein MreC. MreC (mur	88.49
KOG0977	546	consensus Nuclear envelope protein lamin, intermed	86.74
PF01166	59	TSC22: TSC-22/dip/bun family; InterPro: IPR000580	85.8
PF09726	697	Macoilin: Transmembrane protein; InterPro: IPR0191	82.15
PRK13922	276	rod shape-determining protein MreC; Provisional	81.22
KOG4797	123	consensus Transcriptional regulator [Transcription	80.55

>PF09755 DUF2046: Uncharacterized conserved protein H4 (DUF2046); InterPro: IPR019152 This is the conserved N-terminal 350 residues of a family of proteins of unknown function possibly containing a coiled-coil domain

Probab=93.60  E-value=0.96  Score=44.65  Aligned_cols=80  Identities=30%  Similarity=0.442  Sum_probs=56.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhccccCC-CCC-hhHHHHH----HHHHHHHHHhhhhhhhhhhH
Q 019675          186 MATKAATLARELKSIKSDLCFMQERCTLLEEENRRLRDGFVKGI-RPE-EDDLVRL----QLEALLAEKSRLANENASLV  259 (337)
Q Consensus       186 mA~KAkll~rELKtvksdl~f~~~RcaqLEEENk~LReg~~kG~-~pe-dDDLvR~----QlE~LlaEKsrLA~EN~~~a  259 (337)
                      +..+...|.+|-+.+|.+|.--+.||+.|.+||+.||...++-. ..| ++..|--    -|..|-.||..||+   .|-
T Consensus        25 l~~~~~sL~qen~~Lk~El~~ek~~~~~L~~e~~~lr~~sv~~~~~aEqEEE~isN~LlKkl~~l~keKe~L~~---~~e  101 (310)
T PF09755_consen   25 LRKRIESLQQENRVLKRELETEKARCKHLQEENRALREASVRIQAKAEQEEEFISNTLLKKLQQLKKEKETLAL---KYE  101 (310)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHH
Confidence            34456669999999999999999999999999999998644321 222 3333322    25667778888875   366


Q ss_pred             HHhHHHHHH
Q 019675          260 RENQCLHQL  268 (337)
Q Consensus       260 rEn~~L~e~  268 (337)
                      +|-.||..-
T Consensus       102 ~EEE~ltn~  110 (310)
T PF09755_consen  102 QEEEFLTND  110 (310)
T ss_pred             HHHHHHHHH
Confidence            666666443

>PF05769 DUF837: Protein of unknown function (DUF837); InterPro: IPR008555 This family consists of several eukaryotic proteins of unknown function

Probab=92.27  E-value=2.2  Score=38.68  Aligned_cols=97  Identities=25%  Similarity=0.310  Sum_probs=67.8

Q ss_pred             hhhhhHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhccccCCCCChhHHHHHHHHHHHHHH
Q 019675          172 KDKIMKKAKNLAISMA---TKAATLARELKSIKSDLCFMQERCTLLEEENRRLRDGFVKGIRPEEDDLVRLQLEALLAEK  248 (337)
Q Consensus       172 ~e~qLKaSRdVA~amA---~KAkll~rELKtvksdl~f~~~RcaqLEEENk~LReg~~kG~~pedDDLvR~QlE~LlaEK  248 (337)
                      -+.-|..|+.++..+.   .+|-.|+.+--+|...+.-++    +-.|+...|-+-...+.+                  
T Consensus         5 i~~il~dak~L~~rL~~~d~~ad~Ll~qa~~l~~~i~sm~----~y~eei~~l~~~~~~~~~------------------   62 (181)
T PF05769_consen    5 IEQILADAKRLVERLKDHDNAADSLLSQAEALNKQIESMR----QYQEEIQELNELSKNRPR------------------   62 (181)
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHhhcccc------------------
Confidence            4455777777777655   367778888888888887666    334443333332221111                  


Q ss_pred             hhhhhhh---hhhHHHhHHHHHHHHhhhhhhhhhhhhHHhhhhcc
Q 019675          249 SRLANEN---ASLVRENQCLHQLVEYHQLTSQDLSASYEEFIQGM  290 (337)
Q Consensus       249 srLA~EN---~~~arEn~~L~e~veyhQlt~Qdv~e~~Eev~eg~  290 (337)
                      ..|.+||   ..+-+||+=|+..|+=||-+++-+...|-+.+...
T Consensus        63 ~~l~~En~qi~~Lq~EN~eL~~~leEhq~alelIM~KyReq~~~l  107 (181)
T PF05769_consen   63 AGLQQENRQIRQLQQENRELRQSLEEHQSALELIMSKYREQMSQL  107 (181)
T ss_pred             hhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4567777   67889999999999999999999998887766544

One of the family members (O02197 from SWISSPROT) is a circulating cathodic antigen (CCA) found in Schistosoma mansoni (Blood fluke) [].

>TIGR02449 conserved hypothetical protein TIGR02449

Probab=90.25  E-value=0.86  Score=35.90  Aligned_cols=45  Identities=29%  Similarity=0.384  Sum_probs=33.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhHhhhhccccCCCCChhHHHHHHHHHHHHHHhhhhhhhh
Q 019675          196 ELKSIKSDLCFMQERCTLLEEENRRLRDGFVKGIRPEEDDLVRLQLEALLAEKSRLANENA  256 (337)
Q Consensus       196 ELKtvksdl~f~~~RcaqLEEENk~LReg~~kG~~pedDDLvR~QlE~LlaEKsrLA~EN~  256 (337)
                      ||+.+-.-|.-.-.||.+|.+||..||                .|+..+-+|.+.|..-|.
T Consensus         1 ~L~~Le~kle~Li~~~~~L~~EN~~Lr----------------~q~~~~~~ER~~L~ekne   45 (65)
T TIGR02449         1 ELQALAAQVEHLLEYLERLKSENRLLR----------------AQEKTWREERAQLLEKNE   45 (65)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHH
Confidence            466677777888899999999999887                456666667666665554

Members of this family are small proteins, typically 73 amino acids in length, with single copies in each of several Proteobacteria, including Xylella fastidiosa, Pseudomonas aeruginosa, and Xanthomonas campestris. The function is unknown.

>PF14197 Cep57_CLD_2: Centrosome localisation domain of PPC89

Probab=89.55  E-value=3.5  Score=32.35  Aligned_cols=65  Identities=31%  Similarity=0.426  Sum_probs=51.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhccccCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhHHHhHHHH
Q 019675          193 LARELKSIKSDLCFMQERCTLLEEENRRLRDGFVKGIRPEEDDLVRLQLEALLAEKSRLANENASLVRENQCLH  266 (337)
Q Consensus       193 l~rELKtvksdl~f~~~RcaqLEEENk~LReg~~kG~~pedDDLvR~QlE~LlaEKsrLA~EN~~~arEn~~L~  266 (337)
                      |-.|..+++.+|.-+-+..+-.+.+|++||.         +-|-...||--...+=.+|-.||..+..|+.-+|
T Consensus         3 Lea~~~~Lr~rLd~~~rk~~~~~~~~k~L~~---------ERd~~~~~l~~a~~e~~~Lk~E~e~L~~el~~~r   67 (69)
T PF14197_consen    3 LEAEIATLRNRLDSLTRKNSVHEIENKRLRR---------ERDSAERQLGDAYEENNKLKEENEALRKELEELR   67 (69)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            5678899999999999999999999999986         3344556777777777888888888888865443

>TIGR00219 mreC rod shape-determining protein MreC

Probab=88.49  E-value=0.75  Score=43.67  Aligned_cols=45  Identities=29%  Similarity=0.254  Sum_probs=31.1

Q ss_pred             HHHHHHHhHhhhhccccCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhHHHhHHHHHHHHhhhh
Q 019675          211 CTLLEEENRRLRDGFVKGIRPEEDDLVRLQLEALLAEKSRLANENASLVRENQCLHQLVEYHQL  274 (337)
Q Consensus       211 caqLEEENk~LReg~~kG~~pedDDLvR~QlE~LlaEKsrLA~EN~~~arEn~~L~e~veyhQl  274 (337)
                      ..+|.+||++||+-                +..|   +++|...+..+.+||+-||+++.|.+-
T Consensus        68 ~~~l~~EN~~Lr~e----------------~~~l---~~~~~~~~~~l~~EN~rLr~LL~~~~~  112 (283)
T TIGR00219        68 VNNLEYENYKLRQE----------------LLKK---NQQLEILTQNLKQENVRLRELLNSPLS  112 (283)
T ss_pred             HHHHHHHHHHHHHH----------------HHHH---HHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence            45789999999842                2222   233444445589999999999998753

MreC (murein formation C) is involved in the rod shape determination in E. coli, and more generally in cell shape determination of bacteria whether or not they are rod-shaped. Cells defective in MreC are round. Species with MreC include many of the Proteobacteria, Gram-positives, and spirochetes.

>KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure]

Probab=86.74  E-value=7.2  Score=41.24  Aligned_cols=104  Identities=23%  Similarity=0.282  Sum_probs=71.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhccccCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhHHHhHHHH--
Q 019675          189 KAATLARELKSIKSDLCFMQERCTLLEEENRRLRDGFVKGIRPEEDDLVRLQLEALLAEKSRLANENASLVRENQCLH--  266 (337)
Q Consensus       189 KAkll~rELKtvksdl~f~~~RcaqLEEENk~LReg~~kG~~pedDDLvR~QlE~LlaEKsrLA~EN~~~arEn~~L~--  266 (337)
                      |+...+-=|-.+.+.++.++.|.+.||+|.++|+.-...  -..+=..||.||+.=..=+.++-+..-.+.-|..|+.  
T Consensus       142 ~~~~~~~~l~~leAe~~~~krr~~~le~e~~~Lk~en~r--l~~~l~~~r~~ld~Etllr~d~~n~~q~Lleel~f~~~~  219 (546)
T KOG0977|consen  142 KLDDYLSRLSELEAEINTLKRRIKALEDELKRLKAENSR--LREELARARKQLDDETLLRVDLQNRVQTLLEELAFLKRI  219 (546)
T ss_pred             HHHHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence            334344456678999999999999999999999964332  2334445666666555556777777777888888876  


Q ss_pred             ---HHHH---hh----------------hhhhhhhhhhHHhhhhcccccc
Q 019675          267 ---QLVE---YH----------------QLTSQDLSASYEEFIQGMYLDF  294 (337)
Q Consensus       267 ---e~ve---yh----------------Qlt~Qdv~e~~Eev~eg~~ld~  294 (337)
                         ||.|   ||                ++.|||+.+-||..+..+.-|+
T Consensus       220 h~~eI~e~~~~~~rd~t~~~r~~F~~eL~~Ai~eiRaqye~~~~~nR~di  269 (546)
T KOG0977|consen  220 HKQEIEEERRKARRDTTADNREYFKNELALAIREIRAQYEAISRQNRKDI  269 (546)
T ss_pred             cHHHHHHHHHHHhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence               2322   22                3567888888888887776554

>PF01166 TSC22: TSC-22/dip/bun family; InterPro: IPR000580 Several eukaryotic proteins are evolutionary related and are thought to be involved in transcriptional regulation

Probab=85.80  E-value=0.75  Score=36.01  Aligned_cols=33  Identities=30%  Similarity=0.476  Sum_probs=28.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhcc
Q 019675          193 LARELKSIKSDLCFMQERCTLLEEENRRLRDGF  225 (337)
Q Consensus       193 l~rELKtvksdl~f~~~RcaqLEEENk~LReg~  225 (337)
                      +..|...+|..+.-..+|..+||.||.+||...
T Consensus        12 VrEEVevLK~~I~eL~~~n~~Le~EN~~Lk~~~   44 (59)
T PF01166_consen   12 VREEVEVLKEQIAELEERNSQLEEENNLLKQNA   44 (59)
T ss_dssp             -TTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            467888899999999999999999999999753

These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Proteins containing this signature include: Vertebrate protein TSC-22 [], a transcriptional regulator which seems to act on C-type natriuretic peptide (CNP) promoter. Mammalian protein DIP (DSIP-immunoreactive peptide) [], a protein whose function is not yet known. Drosophila protein bunched [] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis. Caenorhabditis elegans hypothetical protein T18D3.7. ; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent; PDB: 1DIP_B.

>PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes

Probab=82.15  E-value=28  Score=37.64  Aligned_cols=102  Identities=25%  Similarity=0.258  Sum_probs=63.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhc-cccCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhHHHhHHH
Q 019675          187 ATKAATLARELKSIKSDLCFMQERCTLLEEENRRLRDG-FVKGIRPEEDDLVRLQLEALLAEKSRLANENASLVRENQCL  265 (337)
Q Consensus       187 A~KAkll~rELKtvksdl~f~~~RcaqLEEENk~LReg-~~kG~~pedDDLvR~QlE~LlaEKsrLA~EN~~~arEn~~L  265 (337)
                      -.+.+=|-.|+|.++.||.-..++|..||.|..-||.- ++  ...+-+.| -.-|-++-.+...|.   .+++-|+|+=
T Consensus       544 r~r~~~lE~E~~~lr~elk~kee~~~~~e~~~~~lr~~~~e--~~~~~e~L-~~aL~amqdk~~~LE---~sLsaEtriK  617 (697)
T PF09726_consen  544 RQRRRQLESELKKLRRELKQKEEQIRELESELQELRKYEKE--SEKDTEVL-MSALSAMQDKNQHLE---NSLSAETRIK  617 (697)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hhhhHHHH-HHHHHHHHHHHHHHH---HhhhHHHHHH
Confidence            34556677899999999999999999999999988875 43  22233333 233333333333332   2466677765


Q ss_pred             HHHHHh-----hh-------hhhhh--hh---hhHHhhhhcccccc
Q 019675          266 HQLVEY-----HQ-------LTSQD--LS---ASYEEFIQGMYLDF  294 (337)
Q Consensus       266 ~e~vey-----hQ-------lt~Qd--v~---e~~Eev~eg~~ld~  294 (337)
                      .+|...     .|       +..||  ++   .-+.||+.|||-++
T Consensus       618 ldLfsaLg~akrq~ei~~~~~~~~d~ei~~lk~ki~~~~av~p~~~  663 (697)
T PF09726_consen  618 LDLFSALGDAKRQLEIAQGQLRKKDKEIEELKAKIAQLLAVMPSDS  663 (697)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence            444322     12       22233  32   77889999999744

; GO: 0016021 integral to membrane

>PRK13922 rod shape-determining protein MreC; Provisional

Probab=81.22  E-value=20  Score=33.15  Aligned_cols=80  Identities=18%  Similarity=0.186  Sum_probs=44.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhccccCCCCChhHHHHHHHHHHHHHHhhhhhhh
Q 019675          176 MKKAKNLAISMATKAATLARELKSIKSDLCFMQERCTLLEEENRRLRDGFVKGIRPEEDDLVRLQLEALLAEKSRLANEN  255 (337)
Q Consensus       176 LKaSRdVA~amA~KAkll~rELKtvksdl~f~~~RcaqLEEENk~LReg~~kG~~pedDDLvR~QlE~LlaEKsrLA~EN  255 (337)
                      +...|.+...+.+..--+......-=.+.-..-.-..+|.+||+.||+-                +..|-++..+|    
T Consensus        36 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~en~~L~~e----------------~~~l~~~~~~~----   95 (276)
T PRK13922         36 LSPVRQVVGDVVSPVQRVVNAPREFVSGVFESLASLFDLREENEELKKE----------------LLELESRLQEL----   95 (276)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHH----
Confidence            3344555555444443333333333334333444556788888888742                33333333333    


Q ss_pred             hhhHHHhHHHHHHHHhhhhh
Q 019675          256 ASLVRENQCLHQLVEYHQLT  275 (337)
Q Consensus       256 ~~~arEn~~L~e~veyhQlt  275 (337)
                      ..+..||.-|++++.+.+-.
T Consensus        96 ~~l~~en~~L~~lL~~~~~~  115 (276)
T PRK13922         96 EQLEAENARLRELLNLKESL  115 (276)
T ss_pred             HHHHHHHHHHHHHhcCcccC
Confidence            25677888999998876543

>KOG4797 consensus Transcriptional regulator [Transcription]

Probab=80.55  E-value=9.9  Score=33.41  Aligned_cols=53  Identities=25%  Similarity=0.312  Sum_probs=42.6

Q ss_pred             CChhhhhHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhccc
Q 019675          170 SPKDKIMKKAKNLAIS--MATKAATLARELKSIKSDLCFMQERCTLLEEENRRLRDGFV  226 (337)
Q Consensus       170 ~~~e~qLKaSRdVA~a--mA~KAkll~rELKtvksdl~f~~~RcaqLEEENk~LReg~~  226 (337)
                      ..-+.+|..+-|+.-.  |-|    ++.|...+|..+--.-+|..+||+||..||....
T Consensus        44 vaIDNKIeQAMDLVKtHLmfA----VREEVe~Lk~qI~eL~er~~~Le~EN~lLk~~~s   98 (123)
T KOG4797|consen   44 VAIDNKIEQAMDLVKTHLMFA----VREEVEVLKEQIRELEERNSALERENSLLKTLAS   98 (123)
T ss_pred             EeechHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence            3467778888887644  333    6888999999999999999999999999998654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	337
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 53.3 bits (127), Expect = 6e-08
 Identities = 59/372 (15%), Positives = 102/372 (27%), Gaps = 107/372 (28%)

Query: 3   ASVDTI-ESPSQVNR-------------QEVTSFMGTSPLYSPSSDKRY-WSNLRSRIDS 47
             +D I  S   V+              + V  F+             Y +  L S I +
Sbjct: 49  EEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEV------LRINYKF--LMSPIKT 100

Query: 48  ILEDRDRKALNGQKRENKEESSRAKRLKEDSQLLLRGFDSVAHTLSQLYNNLDS------ 101
             E R            +    +  RL  D+Q+  +   S      +L   L        
Sbjct: 101 --EQRQPS------MMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKN 152

Query: 102 --------------ALQGARDLAKPPTFTD-IFHSNLNNSENKEEDSRKQQHQEGNKKGL 146
                         AL               IF  NL N  + E      Q        L
Sbjct: 153 VLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQK-------L 205

Query: 147 KRKFDSNESSDDQGDDSQKKDGPSPKDKIMK--KAKNLAIS------------------- 185
             + D N +S      + K    S + ++ +  K+K                        
Sbjct: 206 LYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLS 265

Query: 186 ----MATKAATLARELKSIK-SDLCFMQERCTLLEEENRRLRDGFVK--GIR----PEED 234
               + T+   +   L +   + +       TL  +E + L    +K    R    P E 
Sbjct: 266 CKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL---LLKYLDCRPQDLPREV 322

Query: 235 DLVRLQLEALLAEKSRLANENASLVRENQCLHQLVEYHQLTSQDLSASYEEF----IQGM 290
                +  +++AE  R   +  +    +   H  V   +LT+  + +S         + M
Sbjct: 323 LTTNPRRLSIIAESIR---DGLA--TWDNWKH--VNCDKLTTI-IESSLNVLEPAEYRKM 374

Query: 291 YLDFSS-PSSAK 301
           +   S  P SA 
Sbjct: 375 FDRLSVFPPSAH 386

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.2 bits (106), Expect = 2e-05
 Identities = 46/312 (14%), Positives = 96/312 (30%), Gaps = 88/312 (28%)

Query: 2   AASVDTIESPSQVNRQEVTSFMGTSPLY------SPSSDKRYWSNLR----SRIDSILED 51
                  + P +V        + T+P        S       W N +     ++ +I+E 
Sbjct: 310 YLDCRPQDLPREV--------LTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIE- 360

Query: 52  RDRKALNGQKRENKEESSRAKRLKEDSQLLLRGF-DSV---AHTLSQLYNNLDSA----- 102
               +LN        E +  +++ +     L  F  S       LS ++ ++  +     
Sbjct: 361 ---SSLNVL------EPAEYRKMFDR----LSVFPPSAHIPTILLSLIWFDVIKSDVMVV 407

Query: 103 ---LQGARDLAK-PPTFTDIFHSNLNNSENKEEDSRKQQHQEG-NKKGLKRKFDSNESSD 157
              L     + K P   T    S +      + ++    H+   +   + + FDS++   
Sbjct: 408 VNKLHKYSLVEKQPKESTISIPS-IYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIP 466

Query: 158 DQGDD---------------SQKKDGPSP--------KDKIMKKAKNLAISMATKAATLA 194
              D                 ++              + KI  +  + A + +       
Sbjct: 467 PYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKI--RHDSTAWNASGSILNTL 524

Query: 195 RELKSIKSDLCFMQERCTLLEEENRRLRD--GFVKG-----IRPEEDDLVRLQLEALLAE 247
           ++LK  K    ++ +     E   R +     F+       I  +  DL+R+   AL+AE
Sbjct: 525 QQLKFYKP---YICDNDPKYE---RLVNAILDFLPKIEENLICSKYTDLLRI---ALMAE 575

Query: 248 KSRLANENASLV 259
              +  E    V
Sbjct: 576 DEAIFEEAHKQV 587

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	337
3s9g_A	104	Protein hexim1; cyclin T-binding domain (TBD), cyc	85.53
3q8t_A	96	Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90	84.4

>3s9g_A Protein hexim1; cyclin T-binding domain (TBD), cyclin T1/P-TEFB/7SK snRNA, N transcription; 2.10A {Homo sapiens} PDB: 2gd7_A

Probab=85.53  E-value=1  Score=37.39  Aligned_cols=51  Identities=29%  Similarity=0.346  Sum_probs=36.9

Q ss_pred             HHHHHHHHHHHhHhhhhccccCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhHHHhHHHH
Q 019675          207 MQERCTLLEEENRRLRDGFVKGIRPEEDDLVRLQLEALLAEKSRLANENASLVRENQCLH  266 (337)
Q Consensus       207 ~~~RcaqLEEENk~LReg~~kG~~pedDDLvR~QlE~LlaEKsrLA~EN~~~arEn~~L~  266 (337)
                      .-.|..+||+||++||--....         -.+++.|-+|--||--||..+.+||..-+
T Consensus        42 LE~~~s~le~e~~rlr~~~~~~---------~~~v~eLe~everL~~ENq~L~~e~~~~~   92 (104)
T 3s9g_A           42 LEKSLSRMEDENNRLRLESKRL---------DARVRELELELDRLRAENLQLLTENELHR   92 (104)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhccc---------hhhHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            4567899999999999642211         25677888888888888888777776544

>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}

Probab=84.40  E-value=8  Score=30.68  Aligned_cols=64  Identities=28%  Similarity=0.322  Sum_probs=51.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhccccCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhHHH-hHHHHHHHH
Q 019675          192 TLARELKSIKSDLCFMQERCTLLEEENRRLRDGFVKGIRPEEDDLVRLQLEALLAEKSRLANENASLVRE-NQCLHQLVE  270 (337)
Q Consensus       192 ll~rELKtvksdl~f~~~RcaqLEEENk~LReg~~kG~~pedDDLvR~QlE~LlaEKsrLA~EN~~~arE-n~~L~e~ve  270 (337)
                      .|..||+.++.+=+-+.+.+..||.|...|                ..+|+++-+|..+|-++-..|-|| |-|-+++++
T Consensus         8 ~l~~eL~~l~~eE~~L~~eL~~lEke~~~l----------------~~el~~le~E~~~L~~eE~~~w~eyn~~~~ql~e   71 (96)
T 3q8t_A            8 QLQRELKELALEEERLIQELEDVEKNRKVV----------------AENLEKVQAEAERLDQEEAQYQREYSEFKRQQLE   71 (96)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhHHHH----------------HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence            478889999888888888888888887665                477999999999998888888777 556666655


Q ss_pred             h
Q 019675          271 Y  271 (337)
Q Consensus       271 y  271 (337)
                      |
T Consensus        72 ~   72 (96)
T 3q8t_A           72 L   72 (96)
T ss_dssp             H
T ss_pred             H
Confidence            4

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00