Citrus Sinensis ID: 019688
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 337 | ||||||
| 224101389 | 686 | glycosyltransferase family-37 [Populus t | 0.934 | 0.459 | 0.568 | 1e-105 | |
| 154163107 | 578 | alpha-1,2-fucosyltransferase [Populus tr | 0.934 | 0.544 | 0.568 | 1e-105 | |
| 449434762 | 571 | PREDICTED: galactoside 2-alpha-L-fucosyl | 0.937 | 0.553 | 0.534 | 1e-101 | |
| 255562938 | 578 | Galactoside 2-alpha-L-fucosyltransferase | 0.934 | 0.544 | 0.567 | 1e-101 | |
| 225457363 | 573 | PREDICTED: galactoside 2-alpha-L-fucosyl | 0.934 | 0.549 | 0.544 | 5e-99 | |
| 255572609 | 551 | Galactoside 2-alpha-L-fucosyltransferase | 0.908 | 0.555 | 0.549 | 8e-99 | |
| 449439283 | 586 | PREDICTED: galactoside 2-alpha-L-fucosyl | 0.937 | 0.539 | 0.529 | 1e-98 | |
| 356512053 | 552 | PREDICTED: galactoside 2-alpha-L-fucosyl | 0.931 | 0.568 | 0.534 | 1e-98 | |
| 224053200 | 551 | glycosyl transferase family 37 [Populus | 0.943 | 0.577 | 0.536 | 2e-98 | |
| 147817757 | 661 | hypothetical protein VITISV_031725 [Viti | 0.934 | 0.476 | 0.541 | 3e-98 |
| >gi|224101389|ref|XP_002312258.1| glycosyltransferase family-37 [Populus trichocarpa] gi|222852078|gb|EEE89625.1| glycosyltransferase family-37 [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/315 (56%), Positives = 231/315 (73%)
Query: 3 SGQNDSSSECRYFVWIARAGLGNRILSIASAFLYPILTNRVLLINEEPEMANLFCEPFPN 62
SG ++C Y VWI+ +GLGNRILS+AS FLY +LTNRVLL+++ +MA+LFC+PFP+
Sbjct: 174 SGNKIGLTDCNYIVWISFSGLGNRILSLASTFLYALLTNRVLLVDQGKDMADLFCDPFPD 233
Query: 63 ATWLLPKDFPFMYRISRFKPNYPKSYGNLLKKNKISDSTELLPTHLYLYLCNDYDHHDEL 122
+WLLP+DFP + + F N P +GN+LK N I+ S P++LYL+L +DY HD+L
Sbjct: 234 KSWLLPRDFPLIDQFDSFNQNSPHCHGNMLKNNAINSSAMSKPSYLYLHLVHDYGDHDKL 293
Query: 123 FFCDQDQTILRNIPWLIMKSNLYFLPSLFLMSSFEEELDKLFPDKEMVFHHLGRYLFHPS 182
FFCD +Q+ L N+PWLIMK++ Y++PSLFL+ SFE EL LFP+K VFHHLGRYLFHPS
Sbjct: 294 FFCDGEQSFLENVPWLIMKTDNYYVPSLFLIPSFETELSNLFPEKGTVFHHLGRYLFHPS 353
Query: 183 NQVWKLITSYYKKYLADAEERVGIQIRIFHKNSSPFQQVMDQILSCTDKEKLLPQVDMGK 242
N VW LIT YY+ YLA A+ER+GIQIR F PF+ VMDQIL+CT KEKLLP VDM
Sbjct: 354 NHVWGLITRYYRTYLAKADERIGIQIRTFDSRRGPFKHVMDQILACTLKEKLLPAVDMQD 413
Query: 243 SIVAPFGKGKSKAVLITSLIPSYYEKMKNMYLKHPTLNGEVVAVYQASHEVTEHSMNNVH 302
S+V P K KAVL+TSL+ Y E ++NMY +HPT+ GEVV VYQ SHE + + +H
Sbjct: 414 SVVNPSENAKLKAVLVTSLLSGYSEDLRNMYWEHPTMTGEVVGVYQPSHEEFQQTEKQMH 473
Query: 303 NQMALAEINLLRMMD 317
N+ A AE+ LL + D
Sbjct: 474 NRKAWAEMYLLSLTD 488
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|154163107|gb|ABS70459.1| alpha-1,2-fucosyltransferase [Populus tremula x Populus alba] | Back alignment and taxonomy information |
|---|
| >gi|449434762|ref|XP_004135165.1| PREDICTED: galactoside 2-alpha-L-fucosyltransferase-like [Cucumis sativus] gi|449522873|ref|XP_004168450.1| PREDICTED: galactoside 2-alpha-L-fucosyltransferase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|255562938|ref|XP_002522474.1| Galactoside 2-alpha-L-fucosyltransferase, putative [Ricinus communis] gi|223538359|gb|EEF39966.1| Galactoside 2-alpha-L-fucosyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|225457363|ref|XP_002284788.1| PREDICTED: galactoside 2-alpha-L-fucosyltransferase-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|255572609|ref|XP_002527238.1| Galactoside 2-alpha-L-fucosyltransferase, putative [Ricinus communis] gi|223533414|gb|EEF35164.1| Galactoside 2-alpha-L-fucosyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|449439283|ref|XP_004137415.1| PREDICTED: galactoside 2-alpha-L-fucosyltransferase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|356512053|ref|XP_003524735.1| PREDICTED: galactoside 2-alpha-L-fucosyltransferase-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|224053200|ref|XP_002297719.1| glycosyl transferase family 37 [Populus trichocarpa] gi|222844977|gb|EEE82524.1| glycosyl transferase family 37 [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|147817757|emb|CAN66665.1| hypothetical protein VITISV_031725 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 337 | ||||||
| TAIR|locus:2035812 | 516 | FUT8 "fucosyltransferase 8" [A | 0.919 | 0.600 | 0.517 | 6.5e-90 | |
| TAIR|locus:2056886 | 558 | FT1 "fucosyltransferase 1" [Ar | 0.916 | 0.553 | 0.511 | 3.8e-85 | |
| TAIR|locus:2056901 | 539 | FUT2 "fucosyltransferase 2" [A | 0.931 | 0.582 | 0.498 | 2.7e-84 | |
| TAIR|locus:2047208 | 535 | FUT4 "fucosyltransferase 4" [A | 0.943 | 0.594 | 0.461 | 7.4e-82 | |
| TAIR|locus:2047193 | 514 | FUT10 "fucosyltransferase 10" | 0.916 | 0.601 | 0.468 | 3.7e-80 | |
| TAIR|locus:2047173 | 533 | FUT5 "fucosyltransferase 5" [A | 0.949 | 0.600 | 0.44 | 2.3e-78 | |
| TAIR|locus:2019120 | 525 | FUT3 "fucosyltransferase 3" [A | 0.869 | 0.558 | 0.437 | 1.2e-65 | |
| TAIR|locus:2035824 | 474 | FUT9 "fucosyltransferase 9" [A | 0.658 | 0.468 | 0.522 | 1.8e-64 |
| TAIR|locus:2035812 FUT8 "fucosyltransferase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 897 (320.8 bits), Expect = 6.5e-90, P = 6.5e-90
Identities = 162/313 (51%), Positives = 228/313 (72%)
Query: 8 SSSECRYFVWIARAGLGNRILSIASAFLYPILTNRVLLINEEPEMANLFCEPFPNATWLL 67
S ECRY VWIA GLGNRIL++AS FLY +LT+R++L+++ ++++LFCEPFP +WLL
Sbjct: 121 SVGECRYIVWIAVYGLGNRILTLASLFLYALLTDRIMLVDQRTDISDLFCEPFPGTSWLL 180
Query: 68 PKDFPFMYRISRFKPNYPKSYGNLLKKNKISDST--ELLPTHLYLYLCNDYDHHDELFFC 125
P DFP ++ F P+ YG +LK + I+ +T ++P++L LYL +DYD +D++FFC
Sbjct: 181 PLDFPLTDQLDSFNKESPRCYGTMLKNHAINSTTTESIIPSYLCLYLIHDYDDYDKMFFC 240
Query: 126 DQDQTILRNIPWLIMKSNLYFLPSLFLMSSFEEELDKLFPDKEMVFHHLGRYLFHPSNQV 185
+ DQ ++R +PWL+ SNLYF+PSL+L+ SF+ EL KLFP KE VFHHL RYLFHP+NQV
Sbjct: 241 ESDQILIRQVPWLVFNSNLYFIPSLWLIPSFQSELSKLFPQKETVFHHLARYLFHPTNQV 300
Query: 186 WKLITSYYKKYLADAEERVGIQIRIFHKNSSPFQQVMDQILSCTDKEKLLPQVDMGKSIV 245
W +IT Y YL+ A+ER+GIQ+R+F K + FQ VMDQIL+CT +EKLLP+V + ++ V
Sbjct: 301 WGMITRSYNGYLSRADERLGIQVRVFSKPAGYFQHVMDQILACTQREKLLPEVFVLETQV 360
Query: 246 APFGKG-KSKAVLITSLIPSYYEKMKNMYLKHPTLNGEVVAVYQASHEVTEHSMNNVHNQ 304
+ K KAVL+TSL P Y E ++ MY K P+ GE++ +YQ S E+ + + N +H+Q
Sbjct: 361 TNTSRSSKLKAVLVTSLYPEYSEILRQMYWKGPSSTGEIIQIYQPSQEIYQQTDNKLHDQ 420
Query: 305 MALAEINLLRMMD 317
ALAEI LL + D
Sbjct: 421 KALAEIYLLSLTD 433
|
|
| TAIR|locus:2056886 FT1 "fucosyltransferase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2056901 FUT2 "fucosyltransferase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2047208 FUT4 "fucosyltransferase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2047193 FUT10 "fucosyltransferase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2047173 FUT5 "fucosyltransferase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2019120 FUT3 "fucosyltransferase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2035824 FUT9 "fucosyltransferase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 337 | |||
| pfam03254 | 473 | pfam03254, XG_FTase, Xyloglucan fucosyltransferase | 0.0 | |
| cd11548 | 287 | cd11548, NodZ_like, Alpha 1,6-fucosyltransferase s | 2e-06 |
| >gnl|CDD|217456 pfam03254, XG_FTase, Xyloglucan fucosyltransferase | Back alignment and domain information |
|---|
Score = 511 bits (1318), Expect = 0.0
Identities = 191/318 (60%), Positives = 238/318 (74%), Gaps = 3/318 (0%)
Query: 3 SGQNDSSSECRYFVWIARAGLGNRILSIASAFLYPILTNRVLLINEEPEMANLFCEPFPN 62
SG++ S ECRY VWI GLGNR+LS+ASAFLY +LT+RVLL++ +MA+LFCEPFP
Sbjct: 100 SGRSASDGECRYVVWIPFNGLGNRMLSLASAFLYALLTDRVLLVDPGKDMADLFCEPFPG 159
Query: 63 ATWLLPKDFPFMYRISRFKPNYPKSYGNLLKKNKI-SDSTELLPTHLYLYLCNDYDHHDE 121
+WLLP DFP F P+SYGN+LK I S S LP LYL+L +DY HD+
Sbjct: 160 TSWLLPPDFPLK-NFDGFNQGSPESYGNMLKNKVINSSSVSSLPPFLYLHLDHDYTDHDK 218
Query: 122 LFFCDQDQTILRNIPWLIMKSNLYFLPSLFLMSSFEEELDKLFPDKEMVFHHLGRYLFHP 181
LFFCD DQ++LR +PWLI+KS+ YF+PSLFL+ SF++EL KLFP+KE VFHHLGRYLFHP
Sbjct: 219 LFFCDDDQSLLRKVPWLILKSDNYFVPSLFLVPSFQQELSKLFPEKETVFHHLGRYLFHP 278
Query: 182 SNQVWKLITSYYKKYLADAEERVGIQIRIFHKNSSPFQQVMDQILSCTDKEKLLPQVDMG 241
+NQVW L+T YY+ YLA A+ER+GIQIR+F + PFQ V+DQIL+CT KEKLLP+VD
Sbjct: 279 TNQVWGLVTRYYQAYLAKADERIGIQIRVFDEKPGPFQHVLDQILACTQKEKLLPEVDTQ 338
Query: 242 KSIVAPFGK-GKSKAVLITSLIPSYYEKMKNMYLKHPTLNGEVVAVYQASHEVTEHSMNN 300
+ AP + KSKAVL+TSL YYEK+KNMY +HPT+ GEVV VYQ SHE + + N
Sbjct: 339 EPSSAPPSRNQKSKAVLVTSLYSEYYEKIKNMYWEHPTVTGEVVGVYQPSHEEYQQTGKN 398
Query: 301 VHNQMALAEINLLRMMDA 318
+HNQ ALAE+ LL + D
Sbjct: 399 MHNQKALAEMYLLSLTDV 416
|
Plant cell walls are crucial for development, signal transduction, and disease resistance in plants. Cell walls are made of cellulose, hemicelluloses, and pectins. Xyloglucan (XG), the principal load-bearing hemicellulose of dicotyledonous plants, has a terminal fucosyl residue. This fucosyltransferase adds this residue. Length = 473 |
| >gnl|CDD|211389 cd11548, NodZ_like, Alpha 1,6-fucosyltransferase similar to Bradyrhizobium NodZ | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 337 | |||
| PF03254 | 476 | XG_FTase: Xyloglucan fucosyltransferase; InterPro: | 100.0 | |
| PF05830 | 321 | NodZ: Nodulation protein Z (NodZ); InterPro: IPR00 | 99.87 | |
| PF10250 | 351 | O-FucT: GDP-fucose protein O-fucosyltransferase; I | 98.57 | |
| PF01531 | 298 | Glyco_transf_11: Glycosyl transferase family 11; I | 97.82 | |
| KOG3705 | 580 | consensus Glycoprotein 6-alpha-L-fucosyltransferas | 96.35 | |
| KOG3849 | 386 | consensus GDP-fucose protein O-fucosyltransferase | 86.77 |
| >PF03254 XG_FTase: Xyloglucan fucosyltransferase; InterPro: IPR004938 Plant cell walls are crucial for development, signal transduction, and disease resistance in plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-140 Score=1052.12 Aligned_cols=333 Identities=56% Similarity=0.993 Sum_probs=320.7
Q ss_pred CCCCCCCCCceEEEEecCCCchhHHHHHHHHHHHHHHhCCeeeeeCCCccccccCCCCCCCCcCCCCCCCcccccccCCC
Q 019688 3 SGQNDSSSECRYFVWIARAGLGNRILSIASAFLYPILTNRVLLINEEPEMANLFCEPFPNATWLLPKDFPFMYRISRFKP 82 (337)
Q Consensus 3 ~~~~~~~~~CkYlV~~~~~GLGNRmLsl~SaFLYAlLT~RvLLVd~~~~~~~LFCEPFpgssWlLP~dFp~~~~~~~~~~ 82 (337)
||+++++++||||||++++||||||||||||||||||||||||||+++||++|||||||||||+||+|||+.+++.+++.
T Consensus 102 s~~~~~~~~CkYvVw~~~~GLGNRmLslaSaFLYAlLT~RVLLV~~~~d~~~LFCEPFpgsSWlLP~dFP~~~~~~~~~~ 181 (476)
T PF03254_consen 102 SGHSDGTSECKYVVWIPYSGLGNRMLSLASAFLYALLTNRVLLVDPGKDMADLFCEPFPGSSWLLPPDFPLKNQLNGFSQ 181 (476)
T ss_pred ccCCCCCCCCcEEEEecCCchHHHHHHHHHHHHHHHHhCcEEEEecCCchhhhhcCCCCCCceeCcCCCCchhhccCCCC
Confidence 56678889999999999999999999999999999999999999999999999999999999999999999987889999
Q ss_pred CCCcchHhHhhcCCCCCCCCCCCcEEEEEeccCCCCCCcccccccchhhccCcCEEEEecCcccccccccccccHHHHhh
Q 019688 83 NYPKSYGNLLKKNKISDSTELLPTHLYLYLCNDYDHHDELFFCDQDQTILRNIPWLIMKSNLYFLPSLFLMSSFEEELDK 162 (337)
Q Consensus 83 ~~~~s~g~ml~~~~~~~~~~~~p~~~yl~L~~~~~~~d~~ffCd~~q~~l~~v~Wl~~~sd~YfvP~Lf~~P~f~~eL~~ 162 (337)
++++|||||++|+.++++...+|+|+|+||.|+++++|++||||++|++|+|||||+|+||+||||+||++|+|++||++
T Consensus 182 ~~~~sygnml~~~~~~~~~~~~p~~vyl~L~~~~~~~d~~FfCd~~Q~~L~~vpWLil~sd~YFvP~LFl~P~f~~eL~~ 261 (476)
T PF03254_consen 182 ESAESYGNMLKNKSINNSDNSLPPYVYLHLEHDYDDHDKLFFCDEDQALLRKVPWLILRSDQYFVPSLFLVPSFRPELDR 261 (476)
T ss_pred CchHHHHHHHhcCCccccccCCCceeEEEecccCCcCCCceecCccHHHHhcCCeEEEecCcceeehhhhchHHHHHHHH
Confidence 99999999999999988766799999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcchhhhhhhccccCCchHHHHHHHHHHHhhhccccceeEEEEEEecCCCCchHHHHHHHHHHhhhcCCCCCCC-CC
Q 019688 163 LFPDKEMVFHHLGRYLFHPSNQVWKLITSYYKKYLADAEERVGIQIRIFHKNSSPFQQVMDQILSCTDKEKLLPQVD-MG 241 (337)
Q Consensus 163 lFP~k~~vFhhL~RyLfhPsn~VW~~V~rfy~ayla~a~~riGiQIR~f~~~~~p~~~~~~qi~~C~~~e~lLP~v~-~~ 241 (337)
|||+||+||||||||||||+|+|||+|+|||++|||+||+|||||||+|+.+++|+|+++|||++|+++|||||++. ++
T Consensus 262 lFP~k~tvFhhL~RYLfhPsN~VW~~Itryy~ayLa~Ad~riGIQIRvf~~~~~~~~~~~dqIl~C~~~e~LLP~v~~~~ 341 (476)
T PF03254_consen 262 LFPEKDTVFHHLGRYLFHPSNQVWGLITRYYDAYLAKADERIGIQIRVFDPKPGPFQHVLDQILSCTQQEKLLPEVVDTQ 341 (476)
T ss_pred hcCChhHHHHHHHHHHcCCCchhHHHHHHHHHHHccCcCceeEEEEEecCCCCCcchhHHHHHHHHHhhcccCCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999994 34
Q ss_pred CC-ccCCCCCCceeEEEEeccChHHHHHHHHHhccCCcCCccEEEEEcCCcchhccccchhhhhHHHHHHHHhhhcCcee
Q 019688 242 KS-IVAPFGKGKSKAVLITSLIPSYYEKMKNMYLKHPTLNGEVVAVYQASHEVTEHSMNNVHNQMALAEINLLRMMDACF 320 (337)
Q Consensus 242 ~~-~~~~~~~~~~~aVlVtSL~~~y~e~lr~~y~~~~t~~Ge~v~V~qpShe~~Q~~~~~~h~~kAlaEm~LLS~sD~LV 320 (337)
.+ ++++.++.++||||||||+++|||+||+|||+++|++||+|+||||||||+|++|+++|||||||||||||+||+||
T Consensus 342 ~~~~~~~~~~~~~kaVlVtSL~~~yye~lr~~Y~~~~t~tGe~V~V~QpShe~~Q~~~~~~h~~kAlaEmyLLS~sD~LV 421 (476)
T PF03254_consen 342 EPAASSSSKSQKSKAVLVTSLYSEYYEKLRNMYWEHPTVTGEVVGVHQPSHEEYQQFGDNMHNQKALAEMYLLSLSDVLV 421 (476)
T ss_pred cccccccCCCCceEEEEEEeCCHHHHHHHHHHHhcCCCcCCcEEEEECCCCcccccccccchHHHHHHHHHHHHhccceE
Confidence 44 45677888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCccccccccccc
Q 019688 321 SHKRRVYIRLCGTRS 335 (337)
Q Consensus 321 tS~~STFG~~a~~~~ 335 (337)
||+||||||||.++.
T Consensus 422 TS~~STFGYVAqgLg 436 (476)
T PF03254_consen 422 TSGWSTFGYVAQGLG 436 (476)
T ss_pred ecCCCCchhHHHhhc
Confidence 999999999998864
|
Cell walls are made of cellulose, hemicelluloses, and pectins. Xyloglucan (XG), the principal load-bearing hemicellulose of dicotyledonous plants, has a terminal fucosyl residue. This fucosyltransferase adds this residue []. ; GO: 0008107 galactoside 2-alpha-L-fucosyltransferase activity, 0042546 cell wall biogenesis, 0016020 membrane |
| >PF05830 NodZ: Nodulation protein Z (NodZ); InterPro: IPR008716 The nodulation genes of Rhizobia are regulated by the nodD gene product in response to host-produced flavonoids and appear to encode enzymes involved in the production of a lipo-chitose signal molecule required for infection and nodule formation | Back alignment and domain information |
|---|
| >PF10250 O-FucT: GDP-fucose protein O-fucosyltransferase; InterPro: IPR019378 This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats | Back alignment and domain information |
|---|
| >PF01531 Glyco_transf_11: Glycosyl transferase family 11; InterPro: IPR002516 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
| >KOG3705 consensus Glycoprotein 6-alpha-L-fucosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG3849 consensus GDP-fucose protein O-fucosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 337 | |||
| 2hhc_A | 330 | NODZ, nodulation fucosyltransferase NODZ; glycosyl | 1e-17 |
| >2hhc_A NODZ, nodulation fucosyltransferase NODZ; glycosyltransferase; 1.54A {Bradyrhizobium SP} PDB: 2hlh_A 2ocx_A* 3siw_A* 3six_A* Length = 330 | Back alignment and structure |
|---|
Score = 81.8 bits (201), Expect = 1e-17
Identities = 48/311 (15%), Positives = 104/311 (33%), Gaps = 37/311 (11%)
Query: 10 SECRYFVWIARAGLGNRILSIASAFLYPILTNRVLLINEEPEMANLFCEPFPNATWLLPK 69
++ R+ + R G G+ + S+ASA+ Y T R L+I+ + +PF NA
Sbjct: 2 TKERFVISRRRTGFGDCLWSLASAWSYAQRTGRTLVID--WRGSCYVEQPFSNAFPAF-- 57
Query: 70 DFPFMYRISRFKPNYPKSYGNLLKKNKISDST---ELLPTHLYLYLCNDYDHHDELFFCD 126
F+P + ++ ++++ + P + + DE F +
Sbjct: 58 ----------FEPVEDIAGVPVICDDRVNQLSFPGPFFPRWWNRPSIDCINRPDEQIFRE 107
Query: 127 QDQTILRNIPWLIMKSNLYFLPSLFLMSSFEEELDKLFPDKEMVFHHLGRYLFHPSNQVW 186
+D+ + + LM EE ++L +++
Sbjct: 108 RDE-LTELFQAREDSEANTIVCDACLMWRCSEEAERLI-----------FRNIKLRSEIR 155
Query: 187 KLITSYYKKYLADAEERVGIQIRIFHKNSSPFQQVMDQILSCTDKEKLLPQVDMGKSIVA 246
I + Y+++ +G+ +R + + +M+ D E L QV M
Sbjct: 156 ARIDALYEEHF-SGHSIIGVHVRHGNG-----EDIMEHAPYWADSELALHQVCMAIRKAK 209
Query: 247 PFGKGKSKAVLITSLIPSYYEKMKNMYLKHPTLNGEVVAVYQASHEVTEHSMNNVHNQMA 306
K V + + +++ ++ + A E + + A
Sbjct: 210 ALSYPKPVKVFLCTDSAQVLDQVSGLFPDVFAVPKRFQADRAGPLHSAEMGIEGGAS--A 267
Query: 307 LAEINLLRMMD 317
L ++ LL
Sbjct: 268 LIDMYLLARCA 278
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 337 | |||
| 2hhc_A | 330 | NODZ, nodulation fucosyltransferase NODZ; glycosyl | 100.0 | |
| 2de0_X | 526 | Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran | 99.69 | |
| 3zy2_A | 362 | Putative GDP-fucose protein O-fucosyltransferase; | 98.23 | |
| 4ap5_A | 408 | GDP-fucose protein O-fucosyltransferase 2; GT-B, G | 97.7 |
| >2hhc_A NODZ, nodulation fucosyltransferase NODZ; glycosyltransferase; 1.54A {Bradyrhizobium SP} PDB: 2hlh_A 2ocx_A* 3siw_A* 3six_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-44 Score=342.94 Aligned_cols=276 Identities=16% Similarity=0.184 Sum_probs=193.6
Q ss_pred CCceEEEEecCCCchhHHHHHHHHHHHHHHhCCeeeeeCCCccccccCCCCCCCCcCCCCCCCcccccccCCCCCCcchH
Q 019688 10 SECRYFVWIARAGLGNRILSIASAFLYPILTNRVLLINEEPEMANLFCEPFPNATWLLPKDFPFMYRISRFKPNYPKSYG 89 (337)
Q Consensus 10 ~~CkYlV~~~~~GLGNRmLsl~SaFLYAlLT~RvLLVd~~~~~~~LFCEPFpgssWlLP~dFp~~~~~~~~~~~~~~s~g 89 (337)
+.||||||...+||||||+.+||||+||++|||+|+|||++ ++||+ .|+++|+ |.+||.. . ++++
T Consensus 2 ~~~r~iv~~~~gGLGNqm~~~a~a~~~A~~t~r~l~vd~~~---~~y~~-~~~~~~f-p~~F~~v---~-------~~~~ 66 (330)
T 2hhc_A 2 TKERFVISRRRTGFGDCLWSLASAWSYAQRTGRTLVIDWRG---SCYVE-QPFSNAF-PAFFEPV---E-------DIAG 66 (330)
T ss_dssp CCCCEEEEECCSCHHHHHHHHHHHHHHHHHHTCEEEEECBT---CTTCS-STTSBSH-HHHBCCC---S-------EETT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHHHHHHhCCEEEEECCC---cccCC-CCccccC-cccccch---h-------hhcc
Confidence 57999999999999999999999999999999999999987 57996 5678886 8888721 1 2334
Q ss_pred hHhhcC-CCCCCC--CC-CCcEEEEEeccCCCCCCcccccccchhh------ccCcCEEEEecCcccccccccccccHHH
Q 019688 90 NLLKKN-KISDST--EL-LPTHLYLYLCNDYDHHDELFFCDQDQTI------LRNIPWLIMKSNLYFLPSLFLMSSFEEE 159 (337)
Q Consensus 90 ~ml~~~-~~~~~~--~~-~p~~~yl~L~~~~~~~d~~ffCd~~q~~------l~~v~Wl~~~sd~YfvP~Lf~~P~f~~e 159 (337)
+++..+ .++... .+ .|+ +|.++. .+.++|++.|-. ..-++|....++.|++|++++.+.|+++
T Consensus 67 ~~~~~~~~~~~~~~~~~~~p~-~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~w~~~~~ 139 (330)
T 2hhc_A 67 VPVICDDRVNQLSFPGPFFPR-WWNRPS------IDCINRPDEQIFRERDELTELFQAREDSEANTIVCDACLMWRCSEE 139 (330)
T ss_dssp EEEECSGGGGTCCCCSSEESG-GGGSCG------GGGSCCCHHHHHHHHHHHHHHHHSSSCCSCSEEEECSCCTTSSCHH
T ss_pred cceecccccccccCCCCcCch-hhhccc------cccccChHHhhhhhhhhhhhhhhhhhccCCCeEEcccccccchhhh
Confidence 432211 111111 01 122 222221 136788777543 1223454344458999999999999887
Q ss_pred HhhcCCCcchhhhhhhccccCCchHHHHHHHHHHHhhhccccceeEEEEEEecCCCCch--------HHHHHHHHHHhhh
Q 019688 160 LDKLFPDKEMVFHHLGRYLFHPSNQVWKLITSYYKKYLADAEERVGIQIRIFHKNSSPF--------QQVMDQILSCTDK 231 (337)
Q Consensus 160 L~~lFP~k~~vFhhL~RyLfhPsn~VW~~V~rfy~ayla~a~~riGiQIR~f~~~~~p~--------~~~~~qi~~C~~~ 231 (337)
. ++.+| ||| +|++++|+.|++|+++++++ ++.||||||..+...... ...++++.+|+.+
T Consensus 140 ~------~~~i~----~yl-~p~~~i~~~i~~~~~~~~~~-~~~VGVHIRrgD~~~~~~~~~~~~~~~~~l~~~~~~i~~ 207 (330)
T 2hhc_A 140 A------ERLIF----RNI-KLRSEIRARIDALYEEHFSG-HSIIGVHVRHGNGEDIMEHAPYWADSELALHQVCMAIRK 207 (330)
T ss_dssp H------HHHHH----HHS-CBCHHHHHHHHHHHHHHTTT-SEEEEEEECC------------CHHHHHHHHHHHHHHHH
T ss_pred h------HHHHH----hcC-CccHHHHHHHHHHHHHhccC-CceEEEEEecCCCCcccccCcchHHHhHHHHHHHHHHHH
Confidence 3 44444 997 99999999999999999885 689999999998543221 1237899999988
Q ss_pred cCCCCCCCCCCCccCCCCCCceeEEEEeccChHHHHHHHHHhccCCcCCccEEEEE-cCCcchhccccchhhhhHHHHHH
Q 019688 232 EKLLPQVDMGKSIVAPFGKGKSKAVLITSLIPSYYEKMKNMYLKHPTLNGEVVAVY-QASHEVTEHSMNNVHNQMALAEI 310 (337)
Q Consensus 232 e~lLP~v~~~~~~~~~~~~~~~~aVlVtSL~~~y~e~lr~~y~~~~t~~Ge~v~V~-qpShe~~Q~~~~~~h~~kAlaEm 310 (337)
.+.+++. +.++|||+|+.+++.|++|++|++..+.+++.+... ++.|. ...+..+.++|++||
T Consensus 208 ~~~~~~~-------------~~~~vfvaSDd~~~~~~lk~~~~~~~~~~~~~~~~~~~~~h~---~~~~~~~~~~~~~Dm 271 (330)
T 2hhc_A 208 AKALSYP-------------KPVKVFLCTDSAQVLDQVSGLFPDVFAVPKRFQADRAGPLHS---AEMGIEGGASALIDM 271 (330)
T ss_dssp HHTSCCS-------------SCEEEEEEESCHHHHHHHHHHSTTEECCCC-----------C---HHHHHHHHHHHHHHH
T ss_pred HHhccCc-------------CceEEEEEeCCHHHHHHHHHHcCCcccccceeeccccccccc---CchhhccchHHHHHH
Confidence 8776642 357999999999999999999998666555432111 12222 112346789999999
Q ss_pred HHhhhcCcee-eeCCccccccccccc
Q 019688 311 NLLRMMDACF-SHKRRVYIRLCGTRS 335 (337)
Q Consensus 311 ~LLS~sD~LV-tS~~STFG~~a~~~~ 335 (337)
||||.||++| |+++||||++||.+.
T Consensus 272 ~LLS~cd~~I~~~~~STFs~~aa~l~ 297 (330)
T 2hhc_A 272 YLLARCATVIRFPPTSAFTRYARLLV 297 (330)
T ss_dssp HHHTTCSEEEEESTTCGGGHHHHHHC
T ss_pred HHHHcCCeeEECCCCCCHHHHHHHhC
Confidence 9999999999 888999999999654
|
| >2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens} | Back alignment and structure |
|---|
| >3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A* | Back alignment and structure |
|---|
| >4ap5_A GDP-fucose protein O-fucosyltransferase 2; GT-B, GT68; HET: NAG; 3.00A {Homo sapiens} PDB: 4ap6_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00