Citrus Sinensis ID: 019718

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330------
Protein Sequence
MGLSENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTMIVGEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLITIHNSDYYVQ
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEHHEEEEHHHccccccccccHHHHHHHHccEEEEEEcccccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEEccccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHEEEccccccccccccccccEEEccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEEEEccEEEEEEcccccccccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHcHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccEEccccccHEcc
Coil and Loop (DISEMBL)
MGLSENSKGLILAVASSAFIGSSFILKKKglkragasgtragvggytyLLEPLWWAGMVTMIVGEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIhapqehtpnSVQEIWALATQPDFLIYVAATVSVVLALVLHfeprcgqtnILVYLGICSLMGSLTVVSIKAIGIAIKLTLDgisqiaypqTWFFLTVAAVCVVTQLNYLNKALDTfnaaivspVYYVMFTTLTIIASAIMfkdwsgqdvsgiASEICGFITVLSGTIILHAtreheqttapvgtvtwyvsgdslkgaeeehlitihnsdyyvq
Flexible Loop (DISEMBL)
MGLSENSKGLILAVASSAFIGSSFILKKkglkragasgtragvggYTYLLEPLWWAGMVTMIVGEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATreheqttapvgtvTWYVSGDSLkgaeeehlitihnsdyyvq
Low Complexity Region (SEG)
MGLSENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTMIVGEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYvaatvsvvlalvlHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLITIHNSDYYVQ
Disordered region (IsUnstruct)
*********LILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTMIVGEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLITIHNSDY***
Disordered Region (DISOPRED)
***SENSKGLILAVASSAFIGSSFILKKKGLK**************TYLLEPLWWAGMVTMIVGEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEH**NSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIIL********************************************
Disordered Region (DISEMBL)
MGLSENSKGLILAVASSAFIGSSFILKKK********GTRAGVGGYTYLLEPLWWAGMVTMIVGEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLITIHNSDYYVQ
Disordered Region (DISPRO)
***SENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTMIVGEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREH***T*PVGTV**************EHLITIHNSD*Y**
Transmembrane Helix (TMHMM)
oooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGLSENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTMIVGEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLITIHNSDYYVQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	336	2.2.26 [Sep-21-2011]
Q3SWX0	360	Magnesium transporter NIP	yes	no	0.857	0.8	0.5	1e-74
Q5R7Q3	360	Magnesium transporter NIP	yes	no	0.851	0.794	0.496	4e-74
Q8N8Q9	360	Magnesium transporter NIP	yes	no	0.851	0.794	0.496	4e-74
Q9JJC8	359	Magnesium transporter NIP	yes	no	0.857	0.802	0.489	6e-74
Q8BMW7	416	Magnesium transporter NIP	no	no	0.937	0.757	0.463	2e-69
Q0D2K0	466	Magnesium transporter NIP	no	no	0.875	0.630	0.439	5e-66
Q8BZF2	406	Magnesium transporter NIP	no	no	0.877	0.726	0.424	2e-65
Q5RDB8	410	Magnesium transporter NIP	no	no	0.869	0.712	0.493	1e-59
Q6NVV3	410	Magnesium transporter NIP	no	no	0.869	0.712	0.486	9e-59
Q7RTP0	329	Magnesium transporter NIP	no	no	0.848	0.866	0.403	4e-52

>sp|Q3SWX0|NIPA2_BOVIN Magnesium transporter NIPA2 OS=Bos taurus GN=NIPA2 PE=2 SV=1

 Score =  280 bits (715), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 145/290 (50%), Positives = 193/290 (66%), Gaps = 2/290 (0%)

Query: 9   GLILAVASSAFIGSSFILKKKGLKRAGASG-TRAGVGGYTYLLEPLWWAGMVTMIVGEVA 67
           GL LA++SS FIG SFILKKKGL R    G TRAG GG+ YL E LWWAG+++M  GEVA
Sbjct: 13  GLGLAMSSSIFIGGSFILKKKGLLRLARKGSTRAGQGGHAYLKEWLWWAGLLSMGAGEVA 72

Query: 68  NFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAP 127
           NF AY +APA LVTPLGALS+++  A+L+ + L ERL   G +GC+  I+GS V+VIHAP
Sbjct: 73  NFAAYAFAPATLVTPLGALSVLVS-AILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAP 131

Query: 128 QEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSL 187
           +E    ++ E+      P F+++    V V L L+    PR GQTNILVY+ ICS++G++
Sbjct: 132 KEEEIETLNEMSHKLGDPGFVVFATLVVIVSLILIFVVGPRHGQTNILVYITICSVIGAV 191

Query: 188 TVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPV 247
           +V   K +GIAIK    G   + +P TW  L    VCV TQ+NYLN+ALD FN +IV+P+
Sbjct: 192 SVSCAKGLGIAIKELFAGKPVLQHPLTWILLLSLIVCVSTQINYLNRALDIFNTSIVTPI 251

Query: 248 YYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATRE 297
           YYV FTT  I  SAI+FK+W    V  +   + GF T++ G  +LHA ++
Sbjct: 252 YYVFFTTSVITCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKD 301

Acts as a selective Mg(2+) transporter.
Bos taurus (taxid: 9913)

>sp|Q5R7Q3|NIPA2_PONAB Magnesium transporter NIPA2 OS=Pongo abelii GN=NIPA2 PE=2 SV=1

 Score =  278 bits (711), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 145/292 (49%), Positives = 198/292 (67%), Gaps = 6/292 (2%)

Query: 9   GLILAVASSAFIGSSFILKKKGLKRAGASGT-RAGVGGYTYLLEPLWWAGMVTMIVGEVA 67
           GL LA++SS FIG SFILKKKGL R    G+ RAG GG+ YL E LWWAG+++M  GEVA
Sbjct: 13  GLGLAMSSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLLSMGAGEVA 72

Query: 68  NFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAP 127
           NF AY +APA LVTPLGALS+++  A+L+ + L ERL   G +GC+  I+GS V+VIHAP
Sbjct: 73  NFAAYAFAPATLVTPLGALSVLVS-AILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAP 131

Query: 128 QEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHF--EPRCGQTNILVYLGICSLMG 185
           +E    ++ E+      P F+++  AT+ V++AL+L F   PR GQTNILVY+ ICS++G
Sbjct: 132 KEEEIETLNEMSHKLGDPGFVVF--ATLVVIVALILIFVVGPRHGQTNILVYITICSVIG 189

Query: 186 SLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVS 245
           + +V  +K +GIAIK    G   + +P  W  L    VCV TQ+NYLN+ALD FN +IV+
Sbjct: 190 AFSVSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCVSTQINYLNRALDIFNTSIVT 249

Query: 246 PVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATRE 297
           P+YYV FTT  +  SAI+FK+W    V  +   + GF T++ G  +LHA ++
Sbjct: 250 PIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKD 301

Acts as a selective Mg(2+) transporter.

Pongo abelii (taxid: 9601)

>sp|Q8N8Q9|NIPA2_HUMAN Magnesium transporter NIPA2 OS=Homo sapiens GN=NIPA2 PE=2 SV=1

 Score =  278 bits (711), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 145/292 (49%), Positives = 198/292 (67%), Gaps = 6/292 (2%)

Query: 9   GLILAVASSAFIGSSFILKKKGLKRAGASGT-RAGVGGYTYLLEPLWWAGMVTMIVGEVA 67
           GL LA++SS FIG SFILKKKGL R    G+ RAG GG+ YL E LWWAG+++M  GEVA
Sbjct: 13  GLGLAMSSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLLSMGAGEVA 72

Query: 68  NFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAP 127
           NF AY +APA LVTPLGALS+++  A+L+ + L ERL   G +GC+  I+GS V+VIHAP
Sbjct: 73  NFAAYAFAPATLVTPLGALSVLVS-AILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAP 131

Query: 128 QEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHF--EPRCGQTNILVYLGICSLMG 185
           +E    ++ E+      P F+++  AT+ V++AL+L F   PR GQTNILVY+ ICS++G
Sbjct: 132 KEEEIETLNEMSHKLGDPGFVVF--ATLVVIVALILIFVVGPRHGQTNILVYITICSVIG 189

Query: 186 SLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVS 245
           + +V  +K +GIAIK    G   + +P  W  L    VCV TQ+NYLN+ALD FN +IV+
Sbjct: 190 AFSVSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCVSTQINYLNRALDIFNTSIVT 249

Query: 246 PVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATRE 297
           P+YYV FTT  +  SAI+FK+W    V  +   + GF T++ G  +LHA ++
Sbjct: 250 PIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKD 301

Acts as a selective Mg(2+) transporter.

Homo sapiens (taxid: 9606)

>sp|Q9JJC8|NIPA2_MOUSE Magnesium transporter NIPA2 OS=Mus musculus GN=Nipa2 PE=1 SV=1

 Score =  277 bits (709), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 142/290 (48%), Positives = 191/290 (65%), Gaps = 2/290 (0%)

Query: 9   GLILAVASSAFIGSSFILKKKGLKRAGASGT-RAGVGGYTYLLEPLWWAGMVTMIVGEVA 67
           GL LA+ SS FIG SFILKKKGL R    G+ RAG GG+ YL E LWWAG+++M  GEVA
Sbjct: 13  GLGLAMTSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLLSMGAGEVA 72

Query: 68  NFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAP 127
           NF AY +APA LVTPLGALS+++  A+L+ + L ERL   G +GC+  I+GS V+VIHAP
Sbjct: 73  NFAAYAFAPATLVTPLGALSVLVS-AILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAP 131

Query: 128 QEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSL 187
           +E    ++ E+      P F+++    V V L  +    PR GQTNILVY+ ICS++G+ 
Sbjct: 132 KEEEIETLNEMSHKLGDPGFVVFATFVVIVALIFIFVVGPRHGQTNILVYITICSVIGAF 191

Query: 188 TVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPV 247
           +V  +K +GIAIK  L G   + +P  W  L    VCV TQ+NYLN+ALD FN +IV+P+
Sbjct: 192 SVSCVKGLGIAIKELLAGKPVLQHPLAWILLFSLVVCVSTQINYLNRALDIFNTSIVTPI 251

Query: 248 YYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATRE 297
           YYV FTT  +  SAI+FK+W    V  +   + GF T++ G  +LHA ++
Sbjct: 252 YYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKD 301

Acts as a selective Mg(2+) transporter.

Mus musculus (taxid: 10090)

>sp|Q8BMW7|NIPA3_MOUSE Magnesium transporter NIPA3 OS=Mus musculus GN=Nipal1 PE=1 SV=2

 Score =  262 bits (670), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 152/328 (46%), Positives = 211/328 (64%), Gaps = 13/328 (3%)

Query: 9   GLILAVASSAFIGSSFILKKKGLKRAGASG-TRAGVGGYTYLLEPLWWAGMVTMIVGEVA 67
           GL+LA++SS FIGSSFILKKKGL +    G TRAG GG++YL E LWWAG+++M  GE A
Sbjct: 71  GLVLAISSSVFIGSSFILKKKGLLQLADKGITRAGQGGHSYLKEWLWWAGLLSMGAGEAA 130

Query: 68  NFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAP 127
           NF AY +APA LVTPLGALS++I  A+L+ + L ERL   G +GCI  ++GS V+VIHAP
Sbjct: 131 NFAAYAFAPATLVTPLGALSVLIS-AILSSYFLNERLNIHGKIGCILSVLGSTVMVIHAP 189

Query: 128 QEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSL 187
           QE    S+ E+      P F+ +      + L L+L   P+ GQTNILVY+ ICSL+G+ 
Sbjct: 190 QEGEVTSLHEMEMKLRDPGFVSFAVIISVISLVLILIVAPKKGQTNILVYIAICSLIGAF 249

Query: 188 TVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPV 247
           +V S+K +GIAIK  L+       P  +  LT+ A+ V TQ+NYLNKALDTFN ++V+P+
Sbjct: 250 SVSSVKGLGIAIKELLERKPVYKDPLFFILLTMLALSVTTQINYLNKALDTFNTSLVTPI 309

Query: 248 YYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPVGT 307
           YYV FT++ +  SAI+F++W G     I   + GF T+++G  +LHA +           
Sbjct: 310 YYVFFTSMVVTCSAILFQEWYGMKAGDIIGTLSGFFTIINGIFLLHAFKNTN-------- 361

Query: 308 VTWYVSGDSLKGAEEEHLITIHNSDYYV 335
           +TW    + +  A++E L    N + YV
Sbjct: 362 ITW---SELMSTAKKEALSPNGNQNSYV 386

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+), Cu(2+) and Co(2+) but to a much less extent than Mg(2+).

Mus musculus (taxid: 10090)

>sp|Q0D2K0|NIPA4_HUMAN Magnesium transporter NIPA4 OS=Homo sapiens GN=NIPAL4 PE=1 SV=3

 Score =  251 bits (641), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 130/296 (43%), Positives = 193/296 (65%), Gaps = 2/296 (0%)

Query: 9   GLILAVASSAFIGSSFILKKKGLKRAGASG-TRAGVGGYTYLLEPLWWAGMVTMIVGEVA 67
           GL LA  SS  IGSS ILKKKGL R  A+G TRA  GG+ YL + +WWAG +TM  GEVA
Sbjct: 121 GLGLAFLSSFLIGSSVILKKKGLLRLVATGATRAVDGGFGYLKDAMWWAGFLTMAAGEVA 180

Query: 68  NFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAP 127
           NF AY +APA +VTPLGALS++I  A+L+ + L+E L  +G LGC+ C+ GS V+VIHAP
Sbjct: 181 NFGAYAFAPATVVTPLGALSVLIS-AILSSYFLRESLNLLGKLGCVICVAGSTVMVIHAP 239

Query: 128 QEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSL 187
           +E    ++ E+ +      F+++    +   L L+    PR GQ NIL+Y+ ICS++G+ 
Sbjct: 240 EEEKVTTIMEMASKMKDTGFIVFAVLLLVSCLILIFVIAPRYGQRNILIYIIICSVIGAF 299

Query: 188 TVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPV 247
           +V ++K +GI IK    G+  + +P  +    + A+ + TQ+N+LN+ALD FN ++V P+
Sbjct: 300 SVAAVKGLGITIKNFFQGLPVVRHPLPYILSLILALSLSTQVNFLNRALDIFNTSLVFPI 359

Query: 248 YYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTA 303
           YYV FTT+ + +S I+FK+W       IA  + GF+T++ G  +LHA ++ + + A
Sbjct: 360 YYVFFTTVVVTSSIILFKEWYSMSAVDIAGTLSGFVTIILGVFMLHAFKDLDISCA 415

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Ba(2+), Mn(2+), Sr(2+) and Co(2+) but to a much less extent than Mg(2+) (By similarity). May be a receptor for ligands (trioxilins A3 and B3) from the hepoxilin pathway.

Homo sapiens (taxid: 9606)

>sp|Q8BZF2|NIPA4_MOUSE Magnesium transporter NIPA4 OS=Mus musculus GN=Nipal4 PE=1 SV=1

 Score =  249 bits (635), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 127/299 (42%), Positives = 190/299 (63%), Gaps = 4/299 (1%)

Query: 9   GLILAVASSAFIGSSFILKKKGLKRAGASG-TRAGVGGYTYLLEPLWWAGMVTMIVGEVA 67
           G+ LA  S   IG+S ILKKKGL R  A+G TRA  GGY YL +P+WWAGM TM  GEVA
Sbjct: 61  GVGLAFLSCFLIGTSVILKKKGLIRLVATGATRAVNGGYGYLKDPMWWAGMATMSAGEVA 120

Query: 68  NFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAP 127
           NF AY +APA +VTPLGALS++I  A+ + + L E L  +G LGC+ C+ GS V+VIHAP
Sbjct: 121 NFGAYAFAPATVVTPLGALSVLIS-AIFSSYCLGESLNLLGKLGCVICMAGSTVMVIHAP 179

Query: 128 QEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSL 187
           +E    +V E+ +      F+++    V   L L+    PR GQ NIL+Y+ ICS++GS 
Sbjct: 180 KEEKVTTVAEMASKMKDTGFIVFAVLLVVSCLILIFIVAPRYGQRNILIYIIICSVIGSF 239

Query: 188 TVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPV 247
           +V ++K +G+ I+    G+  + +P  +    +  + ++ Q+N+LN+ALD FN ++V P+
Sbjct: 240 SVTAVKGLGVTIRNFFQGLPVVRHPLPYILSLILGLSIIIQVNFLNRALDIFNTSLVFPI 299

Query: 248 YYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHE--QTTAP 304
           YYV FTT+ + +S ++FK+W       I   + GF+T++ G  +LHA ++ +  Q + P
Sbjct: 300 YYVFFTTVVVASSIVLFKEWYTMSAVDIVGTLSGFVTIILGVFMLHAFKDLDINQISLP 358

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Ba(2+), Mn(2+), Sr(2+) and Co(2+) but to a much less extent than Mg(2+). May be a receptor for ligands (trioxilins A3 and B3) from the hepoxilin pathway.

Mus musculus (taxid: 10090)

>sp|Q5RDB8|NIPA3_PONAB Magnesium transporter NIPA3 OS=Pongo abelii GN=NIPAL1 PE=2 SV=1

 Score =  230 bits (587), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 145/294 (49%), Positives = 197/294 (67%), Gaps = 2/294 (0%)

Query: 9   GLILAVASSAFIGSSFILKKKGLKRAGASG-TRAGVGGYTYLLEPLWWAGMVTMIVGEVA 67
           GL+LAV+SS FIGSSFILKKKGL +  + G TRAG GG++YL E LWW G+++M VGE A
Sbjct: 71  GLVLAVSSSIFIGSSFILKKKGLLQLASKGITRAGQGGHSYLKEWLWWVGLLSMGVGEAA 130

Query: 68  NFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAP 127
           NF AY +APA LVTPLGALS++I  A+L+ + L E L   G +GCI  I+GS V+VIHAP
Sbjct: 131 NFAAYAFAPATLVTPLGALSVLIS-AILSSYFLNEHLNIHGKIGCILSILGSTVMVIHAP 189

Query: 128 QEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSL 187
           QE    S+ E+      P F+ +      + L L+L   P+ GQTNILVY+ ICSL+G+ 
Sbjct: 190 QEEEVTSLHEMEMKLRDPGFISFAVIVTVISLVLILIVAPKKGQTNILVYISICSLIGAF 249

Query: 188 TVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPV 247
           +V S+K +GIAIK  ++      +P  +  L V  + V TQ+NYLNKALDTFN +IV+P+
Sbjct: 250 SVSSVKGLGIAIKELIEWKPVYKHPLVFVLLAVLVLSVTTQINYLNKALDTFNTSIVTPI 309

Query: 248 YYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQT 301
           YYV FT++ +  SAI+F++W G     I   + GF T++ G  +LHA +  + T
Sbjct: 310 YYVFFTSMVVTCSAILFQEWYGMTAGDIIGTLSGFFTIIIGIFLLHAFKNTDIT 363

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+), Cu(2+) and Co(2+) but to a much less extent than Mg(2+).

Pongo abelii (taxid: 9601)

>sp|Q6NVV3|NIPA3_HUMAN Magnesium transporter NIPA3 OS=Homo sapiens GN=NIPAL1 PE=2 SV=1

 Score =  227 bits (579), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 143/294 (48%), Positives = 196/294 (66%), Gaps = 2/294 (0%)

Query: 9   GLILAVASSAFIGSSFILKKKGLKRAGASG-TRAGVGGYTYLLEPLWWAGMVTMIVGEVA 67
           GL+LAV+SS FIGSSFILKKKGL +  + G TRAG GG++YL E LWW G+++M  GE A
Sbjct: 71  GLVLAVSSSIFIGSSFILKKKGLLQLASKGFTRAGQGGHSYLKEWLWWVGLLSMGAGEAA 130

Query: 68  NFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAP 127
           NF AY +APA LVTPLGALS++I  A+L+ + L E L   G +GCI  I+GS V+VIHAP
Sbjct: 131 NFAAYAFAPATLVTPLGALSVLIS-AILSSYFLNEHLNIHGKIGCILSILGSTVMVIHAP 189

Query: 128 QEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSL 187
           QE    S+ E+      P F+ +      + L L+L   P+ GQTNILVY+ ICSL+G+ 
Sbjct: 190 QEEEVTSLHEMEMKLRDPGFISFAVIITVISLVLILIVAPKKGQTNILVYISICSLIGAF 249

Query: 188 TVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPV 247
           +V S+K +GIAIK  ++      +P  +  L V  + V TQ+NYLNKALDTFN ++V+P+
Sbjct: 250 SVSSVKGLGIAIKELIEWKPVYKHPLVFVLLAVLVLSVTTQINYLNKALDTFNTSLVTPI 309

Query: 248 YYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQT 301
           YYV FT++ +  SAI+F++W G     I   + GF T++ G  +LHA +  + T
Sbjct: 310 YYVFFTSMVVTCSAILFQEWYGMTAGDIIGTLSGFFTIIIGIFLLHAFKNTDIT 363

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+), Cu(2+) and Co(2+) but to a much less extent than Mg(2+).

Homo sapiens (taxid: 9606)

>sp|Q7RTP0|NIPA1_HUMAN Magnesium transporter NIPA1 OS=Homo sapiens GN=NIPA1 PE=1 SV=1

 Score =  205 bits (522), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 119/295 (40%), Positives = 178/295 (60%), Gaps = 10/295 (3%)

Query: 7   SKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTMIVGEV 66
           S GL +AV SS   GS+F+L+KKG+ RA   GT       +YL + +WWAG + M VG++
Sbjct: 29  SLGLGVAVVSSLVNGSTFVLQKKGIVRAKRRGT-------SYLTDIVWWAGTIAMAVGQI 81

Query: 67  ANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHA 126
            NF+AY   P VLVTPLGAL +    ++LA ++LKE+L  +G LGC+    GSVV++IH+
Sbjct: 82  GNFLAYTAVPTVLVTPLGALGVPFG-SILASYLLKEKLNILGKLGCLLSCAGSVVLIIHS 140

Query: 127 PQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGS 186
           P+  +  +  E+    T P F+ Y+   + ++L L+    P  G TNI+VY+ ICSL+GS
Sbjct: 141 PKSESVTTQAELEEKLTNPVFVGYLCIVLLMLLLLIFWIAPAHGPTNIMVYISICSLLGS 200

Query: 187 LTVVSIKAIGIAIKLTL--DGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIV 244
            TV S K IG+A +  L  +  SQ A       L V    ++ Q  Y+NKAL+ F++++ 
Sbjct: 201 FTVPSTKGIGLAAQDILHNNPSSQRALCLCLVLLAVLGCSIIVQFRYINKALECFDSSVF 260

Query: 245 SPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHE 299
             +YYV+FTTL ++ASAI+F++WS   +       CGF TV  G +++   +E  
Sbjct: 261 GAIYYVVFTTLVLLASAILFREWSNVGLVDFLGMACGFTTVSVGIVLIQVFKEFN 315

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+) and Co(2+) but to a much less extent than Mg(2+).

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	336
225427938	334	PREDICTED: magnesium transporter NIPA2 [	0.994	1.0	0.869	1e-168
356544720	337	PREDICTED: magnesium transporter NIPA2-l	0.982	0.979	0.825	1e-158
388504420	334	unknown [Medicago truncatula]	0.982	0.988	0.807	1e-155
449454187	333	PREDICTED: magnesium transporter NIPA2-l	0.982	0.990	0.804	1e-155
297824951	328	hypothetical protein ARALYDRAFT_480961 [	0.970	0.993	0.793	1e-150
255574704	320	Non-imprinted in Prader-Willi/Angelman s	0.886	0.931	0.862	1e-150
30681265	328	uncharacterized protein [Arabidopsis tha	0.970	0.993	0.787	1e-150
224078113	298	predicted protein [Populus trichocarpa]	0.886	1.0	0.896	1e-145
356509533	334	PREDICTED: magnesium transporter NIPA2-l	0.985	0.991	0.762	1e-140
297801948	326	hypothetical protein ARALYDRAFT_490637 [	0.967	0.996	0.743	1e-139

>gi|225427938|ref|XP_002277315.1| PREDICTED: magnesium transporter NIPA2 [Vitis vinifera] gi|297744652|emb|CBI37914.3| unnamed protein product [Vitis vinifera]

 Score =  598 bits (1541), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 292/336 (86%), Positives = 317/336 (94%), Gaps = 2/336 (0%)

Query: 1   MGLSENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVT 60
           MG+S+N++GLILA+ASSAFIGSSFILKKKGLKRA  SGTRAGVGGYTYLLEPLWWAGMV 
Sbjct: 1   MGVSDNTRGLILAMASSAFIGSSFILKKKGLKRAADSGTRAGVGGYTYLLEPLWWAGMVL 60

Query: 61  MIVGEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSV 120
           MIVGEVANFVAYVYAPAVLVTPLGALSIII  A+LAHFMLKERLQKMG+LGC++CIVGSV
Sbjct: 61  MIVGEVANFVAYVYAPAVLVTPLGALSIIIS-AILAHFMLKERLQKMGVLGCVSCIVGSV 119

Query: 121 VIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGI 180
           VIVIHAPQEHTPNSVQEIWALATQP FLIYVAAT+S VLAL+L+FEPR GQTNILVYLGI
Sbjct: 120 VIVIHAPQEHTPNSVQEIWALATQPAFLIYVAATLSAVLALILYFEPRYGQTNILVYLGI 179

Query: 181 CSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFN 240
           CSLMGSLTVVSIKAIGIAIKLTL+GISQ+AYPQTWFFLTVAAVCV+TQLNYLNKALDTFN
Sbjct: 180 CSLMGSLTVVSIKAIGIAIKLTLEGISQVAYPQTWFFLTVAAVCVITQLNYLNKALDTFN 239

Query: 241 AAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQ 300
           AAIVSP+YYVMFTTLTI ASAIMFKDWSGQ+ S IASEICGFITVLSGTIILHATRE E 
Sbjct: 240 AAIVSPIYYVMFTTLTISASAIMFKDWSGQNASSIASEICGFITVLSGTIILHATREQEP 299

Query: 301 TTAPVGTVTWYVSGDSLKGAEEEHLITIHNSDYYVQ 336
            TA  GT+TWY+SGD++KG E+EH IT+H+SDY+ Q
Sbjct: 300 ATAS-GTITWYLSGDAMKGVEDEHFITLHHSDYFEQ 334

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356544720|ref|XP_003540795.1| PREDICTED: magnesium transporter NIPA2-like [Glycine max]

 Score =  564 bits (1454), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 274/332 (82%), Positives = 302/332 (90%), Gaps = 2/332 (0%)

Query: 2   GLSENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTM 61
           G+S+N KGLILA+ SSAFIGSSFILKKKGLKRA A GTRAGVGGYTYLLEPLWWAGMVTM
Sbjct: 5   GVSDNFKGLILAMGSSAFIGSSFILKKKGLKRAAARGTRAGVGGYTYLLEPLWWAGMVTM 64

Query: 62  IVGEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVV 121
           I+GE+ANFVAY+YAPAVLVTPLGALSII+  AVL+HF+LKERL KMG+LGC++CIVGS+V
Sbjct: 65  IIGEIANFVAYIYAPAVLVTPLGALSIIVS-AVLSHFLLKERLPKMGVLGCVSCIVGSIV 123

Query: 122 IVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGIC 181
           IVIHAPQE TP+SVQEIW LATQP FL YV ATVSVVLAL++HFEPR GQTN+LVYLGIC
Sbjct: 124 IVIHAPQEQTPSSVQEIWDLATQPAFLFYVMATVSVVLALIVHFEPRYGQTNMLVYLGIC 183

Query: 182 SLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNA 241
           SL+GSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVA +CV+TQLNYLN+ALDTFNA
Sbjct: 184 SLVGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVATICVITQLNYLNRALDTFNA 243

Query: 242 AIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQT 301
            IVSPVYYVMFTTLTIIASAIMFKDWSGQDVS IASEICGFITVL+GTIILH TRE E++
Sbjct: 244 TIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSSIASEICGFITVLTGTIILHMTREQEES 303

Query: 302 TAPVGTVTWYVSGDSLKGAEEEHLITIHNSDY 333
                T TW++  D +KG E EHLI IH+SDY
Sbjct: 304 NMQ-KTSTWFIGEDLMKGVENEHLIRIHDSDY 334

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388504420|gb|AFK40276.1| unknown [Medicago truncatula]

 Score =  555 bits (1429), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 268/332 (80%), Positives = 302/332 (90%), Gaps = 2/332 (0%)

Query: 1   MGLSENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVT 60
           MG+SEN KGLILAV SS FIG+SFILKKKGLKRA + GTRAGVGGYTYLLEPLWW GMVT
Sbjct: 1   MGVSENYKGLILAVCSSGFIGASFILKKKGLKRAASRGTRAGVGGYTYLLEPLWWVGMVT 60

Query: 61  MIVGEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSV 120
           MI GE ANFVAY+YAPAVLVTPLGALSII+  +VLAHF+LKERLQKMG+LGC++CIVGS+
Sbjct: 61  MITGEAANFVAYIYAPAVLVTPLGALSIIVS-SVLAHFLLKERLQKMGVLGCLSCIVGSI 119

Query: 121 VIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGI 180
           VIVIHAPQEHTPNSVQEIW LATQP+F+IY AATVSVVLAL+L+FEPR GQ N+LVYLGI
Sbjct: 120 VIVIHAPQEHTPNSVQEIWELATQPEFMIYAAATVSVVLALILNFEPRYGQKNMLVYLGI 179

Query: 181 CSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFN 240
           CSLMGSLTV+SIKAIGIAIKLTLDGI+QIAYPQTWFF+ VA++CVVTQLNYLNKALDTF+
Sbjct: 180 CSLMGSLTVMSIKAIGIAIKLTLDGINQIAYPQTWFFVIVASICVVTQLNYLNKALDTFD 239

Query: 241 AAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQ 300
           A IV+PVYYVMFTTLTI+ASAIMFKDWSGQDVS +ASEICGFITVL+GTIILH T+E E+
Sbjct: 240 ATIVTPVYYVMFTTLTIVASAIMFKDWSGQDVSSVASEICGFITVLTGTIILHGTKEQEE 299

Query: 301 TTAPVGTVTWYVSGDSLKGAEEEHLITIHNSD 332
            T   GT++W++S DS K  E+EHLI I+  D
Sbjct: 300 FTRK-GTMSWFMSEDSTKCVEDEHLIVINGPD 330

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449454187|ref|XP_004144837.1| PREDICTED: magnesium transporter NIPA2-like [Cucumis sativus] gi|449510408|ref|XP_004163655.1| PREDICTED: magnesium transporter NIPA2-like [Cucumis sativus]

 Score =  554 bits (1427), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 268/333 (80%), Positives = 306/333 (91%), Gaps = 3/333 (0%)

Query: 1   MGLSENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVT 60
           M +SENSKGLILA+ASSAFIGSSFILKKKGLKRAGA+G RAGVGGYTYLLEPLWWAGM+T
Sbjct: 1   MTISENSKGLILAMASSAFIGSSFILKKKGLKRAGATGARAGVGGYTYLLEPLWWAGMIT 60

Query: 61  MIVGEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSV 120
           MI+GE+ANFVAY+YAPAVLVTPLGALSII+  AVLAHF+LKERLQKMG++GC++CIVGSV
Sbjct: 61  MIIGEIANFVAYIYAPAVLVTPLGALSIIVS-AVLAHFLLKERLQKMGVVGCLSCIVGSV 119

Query: 121 VIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGI 180
           +IVIHAPQEHTP+SV+EIW LATQP FL+Y+AA  S+VLAL+L+FEPR G  NILVYLGI
Sbjct: 120 IIVIHAPQEHTPDSVEEIWDLATQPAFLVYIAAIASLVLALMLYFEPRYGHVNILVYLGI 179

Query: 181 CSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFN 240
           CSLMGSLTV+SIKAIGIAI+LTL+GISQ+AYPQTW F+TVA VCV+TQLNYLNKALDTFN
Sbjct: 180 CSLMGSLTVMSIKAIGIAIRLTLEGISQVAYPQTWLFVTVAVVCVITQLNYLNKALDTFN 239

Query: 241 AAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQ 300
           AA+VSPVYY MFTTLTIIASAIMFKDWSGQ+ S I SE+CGF+TVLSGTIILH+TRE +Q
Sbjct: 240 AALVSPVYYAMFTTLTIIASAIMFKDWSGQNASTIVSELCGFVTVLSGTIILHSTRE-QQ 298

Query: 301 TTAPVGTVTWYVSGDSLKGAEEEHLITIHNSDY 333
             +  G+V WY+SGDS+K + EEHLITI NS Y
Sbjct: 299 PVSSQGSVAWYISGDSMK-SFEEHLITISNSHY 330

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297824951|ref|XP_002880358.1| hypothetical protein ARALYDRAFT_480961 [Arabidopsis lyrata subsp. lyrata] gi|297326197|gb|EFH56617.1| hypothetical protein ARALYDRAFT_480961 [Arabidopsis lyrata subsp. lyrata]

 Score =  538 bits (1386), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 262/330 (79%), Positives = 293/330 (88%), Gaps = 4/330 (1%)

Query: 4   SENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTMIV 63
           S+N KGLILAVASS FIGSSFILKKKGLKRAGA GTRAG GGYTYLLEPLWWAGMVTMIV
Sbjct: 3   SDNGKGLILAVASSVFIGSSFILKKKGLKRAGAIGTRAGYGGYTYLLEPLWWAGMVTMIV 62

Query: 64  GEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIV 123
           GE ANFVAY+YAPAVLVTPLGALSIII  AVLAHF+LKE+L+KMG+LGC++CIVGSVVIV
Sbjct: 63  GEAANFVAYIYAPAVLVTPLGALSIIIS-AVLAHFLLKEKLKKMGVLGCVSCIVGSVVIV 121

Query: 124 IHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSL 183
           IHAP+E TPNSV+EIW LATQP FLIYVA T+S+VLAL+LHFEP CGQTNILVY+GICSL
Sbjct: 122 IHAPKEQTPNSVEEIWNLATQPAFLIYVAITMSIVLALILHFEPLCGQTNILVYIGICSL 181

Query: 184 MGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAI 243
           MG+LTV+SIKAIGIAIKLT++G+SQI YPQTW F+ VA  CVVTQL YLNKALDTFNAAI
Sbjct: 182 MGALTVMSIKAIGIAIKLTMEGVSQIGYPQTWLFVMVAVTCVVTQLIYLNKALDTFNAAI 241

Query: 244 VSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTA 303
           VSPVYYVMFTTLTI+ASAIMFKDWSGQD + +ASE+CGFITVL+GT+ILH TRE EQ  A
Sbjct: 242 VSPVYYVMFTTLTIVASAIMFKDWSGQDAASVASELCGFITVLTGTMILHGTREEEQQQA 301

Query: 304 PVGTVTWYVSGDSLKGAEEEHLITIHNSDY 333
               V WY   DS K   EEHLI++++ +Y
Sbjct: 302 SSEQVRWY---DSRKSMNEEHLISLYSPEY 328

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255574704|ref|XP_002528260.1| Non-imprinted in Prader-Willi/Angelman syndrome region protein, putative [Ricinus communis] gi|223532297|gb|EEF34098.1| Non-imprinted in Prader-Willi/Angelman syndrome region protein, putative [Ricinus communis]

 Score =  536 bits (1380), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 258/299 (86%), Positives = 284/299 (94%), Gaps = 1/299 (0%)

Query: 1   MGLSENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVT 60
           MG+S+NSKGLILAVASSAFIGSSFILKKKGLKRAGA+GTRAGVGGYTYLLEPLWWAGM+T
Sbjct: 1   MGVSDNSKGLILAVASSAFIGSSFILKKKGLKRAGATGTRAGVGGYTYLLEPLWWAGMIT 60

Query: 61  MIVGEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSV 120
           M VGEVANFVAYVYAPA LVTPLGALSIII  A+LAHFML+ERLQKMG++GC++CIVGSV
Sbjct: 61  MFVGEVANFVAYVYAPAFLVTPLGALSIIIS-AILAHFMLRERLQKMGVVGCVSCIVGSV 119

Query: 121 VIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGI 180
           VIVIHAP+EHTP+SVQE+W LATQP FLIYVAA++S+VL L+LHFEPRCGQTN+LVYLGI
Sbjct: 120 VIVIHAPEEHTPSSVQEVWTLATQPAFLIYVAASLSMVLVLILHFEPRCGQTNMLVYLGI 179

Query: 181 CSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFN 240
           CSL+GS+TVVSIKAIGIAIKLTL+G SQIAYPQTWFFLTVA +CV+TQLNYLN+ALDTFN
Sbjct: 180 CSLIGSITVVSIKAIGIAIKLTLEGTSQIAYPQTWFFLTVAVICVITQLNYLNRALDTFN 239

Query: 241 AAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHE 299
           A IVSPVYYVMFTTLTI+ASAIMFKDWSGQ+ S I SEICGFITVLSGTIILHATR  E
Sbjct: 240 ATIVSPVYYVMFTTLTIVASAIMFKDWSGQNASSITSEICGFITVLSGTIILHATRGQE 298

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30681265|ref|NP_179708.2| uncharacterized protein [Arabidopsis thaliana] gi|26452186|dbj|BAC43181.1| unknown protein [Arabidopsis thaliana] gi|109946593|gb|ABG48475.1| At2g21120 [Arabidopsis thaliana] gi|330252031|gb|AEC07125.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  536 bits (1380), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 260/330 (78%), Positives = 293/330 (88%), Gaps = 4/330 (1%)

Query: 4   SENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTMIV 63
           ++N KGLILAVASS FIGSSFILKKKGLKRAGA GTRAG GGYTYLLEPLWWAGMVTMIV
Sbjct: 3   TDNGKGLILAVASSVFIGSSFILKKKGLKRAGAIGTRAGYGGYTYLLEPLWWAGMVTMIV 62

Query: 64  GEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIV 123
           GE ANFVAY+YAPAVLVTPLGALSIII  AVLAHF+LKE+L+KMG+LGC++CIVGSVVIV
Sbjct: 63  GEAANFVAYIYAPAVLVTPLGALSIIIS-AVLAHFLLKEKLKKMGVLGCVSCIVGSVVIV 121

Query: 124 IHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSL 183
           IHAP+E TPNSV+EIW LATQP FLIYVA T+S+VLAL+LHFEP CGQTNILVY+GICSL
Sbjct: 122 IHAPKEQTPNSVEEIWNLATQPAFLIYVAITMSIVLALILHFEPLCGQTNILVYIGICSL 181

Query: 184 MGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAI 243
           MG+LTV+SIKAIGIAIKLT++G+SQI YPQTW F+ VA  CVVTQL YLNKALDTFNAAI
Sbjct: 182 MGALTVMSIKAIGIAIKLTMEGVSQIGYPQTWLFVMVAVTCVVTQLIYLNKALDTFNAAI 241

Query: 244 VSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTA 303
           VSPVYYVMFTTLTI+ASAIMFKDWSGQD + +ASE+CGFITVL+GT+ILH TRE EQ  A
Sbjct: 242 VSPVYYVMFTTLTIVASAIMFKDWSGQDAASVASELCGFITVLTGTMILHGTREEEQQQA 301

Query: 304 PVGTVTWYVSGDSLKGAEEEHLITIHNSDY 333
               V WY   DS K   EEHL+++++ +Y
Sbjct: 302 SSEHVRWY---DSRKSMNEEHLVSLYSPEY 328

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224078113|ref|XP_002305489.1| predicted protein [Populus trichocarpa] gi|222848453|gb|EEE86000.1| predicted protein [Populus trichocarpa]

 Score =  520 bits (1339), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 268/299 (89%), Positives = 290/299 (96%), Gaps = 1/299 (0%)

Query: 1   MGLSENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVT 60
           MG+SENS+GLILAVASSAFIG+SFILKKKGLKRAGA+GTRAGVGGYTYLLEPLWWAGMVT
Sbjct: 1   MGVSENSRGLILAVASSAFIGASFILKKKGLKRAGANGTRAGVGGYTYLLEPLWWAGMVT 60

Query: 61  MIVGEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSV 120
           MIVGE+ANFVAYVYAPAVLVTPLGALSIII  AVLAHFMLKERLQKMG++GC++C+VGSV
Sbjct: 61  MIVGEIANFVAYVYAPAVLVTPLGALSIIIS-AVLAHFMLKERLQKMGVVGCVSCVVGSV 119

Query: 121 VIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGI 180
           VIVIHAPQEHTP+SVQEIW LATQ  FLIYV AT+SVVLAL+L+FEPRCGQTNILVYLGI
Sbjct: 120 VIVIHAPQEHTPSSVQEIWTLATQTAFLIYVVATLSVVLALILYFEPRCGQTNILVYLGI 179

Query: 181 CSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFN 240
           CSLMGS+TVVSIKAIGIAIKLTL+GI+QIAYPQTWFFL+VA +CV+TQLNYLN+ALDTFN
Sbjct: 180 CSLMGSITVVSIKAIGIAIKLTLEGINQIAYPQTWFFLSVAVICVITQLNYLNRALDTFN 239

Query: 241 AAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHE 299
           AAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVS IASE+CGFITVLSGTIILHATRE E
Sbjct: 240 AAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSSIASELCGFITVLSGTIILHATREQE 298

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356509533|ref|XP_003523502.1| PREDICTED: magnesium transporter NIPA2-like [Glycine max]

 Score =  503 bits (1295), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 254/333 (76%), Positives = 291/333 (87%), Gaps = 2/333 (0%)

Query: 1   MGLSENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVT 60
           MG++ENSKGL+LAVAS  FIG+SF+LKKKGLK+A   GTRAGVGGY+YLL+PLWWAGM+T
Sbjct: 1   MGIAENSKGLVLAVASGVFIGASFVLKKKGLKQAATHGTRAGVGGYSYLLQPLWWAGMLT 60

Query: 61  MIVGEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSV 120
           M++GEVANFVAY+YAPA+LVTPLGALSII+  AVLAHF+LKE+LQKMGILGC+ CIVGSV
Sbjct: 61  MLIGEVANFVAYIYAPALLVTPLGALSIIVS-AVLAHFLLKEKLQKMGILGCVFCIVGSV 119

Query: 121 VIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGI 180
           +IVIHAPQEH  NSVQEIW LATQP FL+YVAA VSVVLAL+LHFEPR GQTN+LVYLGI
Sbjct: 120 LIVIHAPQEHALNSVQEIWDLATQPLFLVYVAAAVSVVLALILHFEPRYGQTNMLVYLGI 179

Query: 181 CSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFN 240
           CSL+GSL V+S KAIGIAIKLTL+G SQ+ YPQTWFFLTV  +C++TQLNYLNKALDTFN
Sbjct: 180 CSLIGSLLVMSTKAIGIAIKLTLEGTSQLTYPQTWFFLTVTVICIITQLNYLNKALDTFN 239

Query: 241 AAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQ 300
            AIVSPVYYVMFTTLTIIAS IMFKDWS Q    IASEICGF+ VLSGTI+LHATRE EQ
Sbjct: 240 TAIVSPVYYVMFTTLTIIASVIMFKDWSEQSAGSIASEICGFVIVLSGTILLHATREQEQ 299

Query: 301 TTAPVGTVTWYVSGDSLKGAEEEHLITIHNSDY 333
           +    G++TWY+  D +K  E+ HL  +H SDY
Sbjct: 300 SNKQ-GSLTWYIGEDLVKRIEDGHLNLLHGSDY 331

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297801948|ref|XP_002868858.1| hypothetical protein ARALYDRAFT_490637 [Arabidopsis lyrata subsp. lyrata] gi|297314694|gb|EFH45117.1| hypothetical protein ARALYDRAFT_490637 [Arabidopsis lyrata subsp. lyrata]

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 246/331 (74%), Positives = 285/331 (86%), Gaps = 6/331 (1%)

Query: 3   LSENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTMI 62
           +S+N  GL LAV+SS FIGSSFILKKKGLKRA A+GTRAG GGYTYLLEPLWW G+VTM 
Sbjct: 2   VSDNEMGLALAVSSSVFIGSSFILKKKGLKRAAANGTRAGFGGYTYLLEPLWWVGLVTMT 61

Query: 63  VGEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVI 122
            GE+ANFVAYVYAPAVLVTPLGALSIII  AVLAHF+L E+L+KMG+ GC+ CIVGSV+I
Sbjct: 62  FGEIANFVAYVYAPAVLVTPLGALSIIIS-AVLAHFLLDEKLRKMGVWGCVCCIVGSVMI 120

Query: 123 VIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICS 182
           VIHAPQE TPNSV+EIW LA QP FLIYVA ++S+VLAL+L+ EP CGQTNILVY+GICS
Sbjct: 121 VIHAPQEQTPNSVEEIWKLAMQPAFLIYVAISMSIVLALILYCEPLCGQTNILVYIGICS 180

Query: 183 LMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAA 242
           LMGSLTV+SIKA+GIAIKLT +GI+QI YP+TWFF  VAA+CVV Q+ YLNKALDTFNAA
Sbjct: 181 LMGSLTVMSIKAVGIAIKLTFEGINQIWYPETWFFAIVAAICVVMQMIYLNKALDTFNAA 240

Query: 243 IVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTT 302
           IVSP+YYVMFTTLTI+ASAIMFKDW+GQ+   IASEICGFITVL+GT+ILHATRE EQ  
Sbjct: 241 IVSPIYYVMFTTLTIVASAIMFKDWNGQNTDSIASEICGFITVLTGTVILHATREEEQ-- 298

Query: 303 APVGTVTWYVSGDSLKGAEEEHLITIHNSDY 333
           A  G + W  SG S    +EEHL ++++ +Y
Sbjct: 299 ASPGRMRWQDSGKSF---DEEHLTSLYSPEY 326

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	336
TAIR|locus:2047112	328	AT2G21120 [Arabidopsis thalian	0.970	0.993	0.760	2.1e-132
TAIR|locus:2141742	326	AT4G38730 "AT4G38730" [Arabido	0.967	0.996	0.712	2.7e-123
TAIR|locus:2009343	368	AT1G34470 "AT1G34470" [Arabido	0.904	0.826	0.603	1.1e-103
TAIR|locus:2016084	343	AT1G71900 "AT1G71900" [Arabido	0.872	0.854	0.632	4.2e-102
TAIR|locus:2076186	335	AT3G23870 "AT3G23870" [Arabido	0.904	0.907	0.619	8.8e-102
TAIR|locus:2136912	386	AT4G09640 "AT4G09640" [Arabido	0.872	0.759	0.629	3e-101
TAIR|locus:2119540	336	AT4G13800 [Arabidopsis thalian	0.904	0.904	0.596	1.5e-99
CGD|CAL0004327	368	orf19.5352 [Candida albicans (	0.854	0.779	0.498	5.3e-72
UNIPROTKB|Q5A5P7	368	CaO19.12812 "Putative uncharac	0.854	0.779	0.498	5.3e-72
UNIPROTKB|I3LR53	414	LOC100520441 "Uncharacterized	0.943	0.765	0.460	2.3e-71

TAIR|locus:2047112 AT2G21120 [Arabidopsis thaliana (taxid:3702)]

 Score = 1298 (462.0 bits), Expect = 2.1e-132, P = 2.1e-132
 Identities = 251/330 (76%), Positives = 281/330 (85%)

Query:     4 SENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTMIV 63
             ++N KGLILAVASS FIGSSFILKKKGLKRAGA GTRAG GGYTYLLEPLWWAGMVTMIV
Sbjct:     3 TDNGKGLILAVASSVFIGSSFILKKKGLKRAGAIGTRAGYGGYTYLLEPLWWAGMVTMIV 62

Query:    64 GEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIV 123
             GE ANFVAY+YAPAVLVTPLGALSIII  AVLAHF+LKE+L+KMG+LGC++CIVGSVVIV
Sbjct:    63 GEAANFVAYIYAPAVLVTPLGALSIIIS-AVLAHFLLKEKLKKMGVLGCVSCIVGSVVIV 121

Query:   124 IHAPQEHTPNSVQEIWALATQPDFLIYXXXXXXXXXXXXXHFEPRCGQTNILVYLGICSL 183
             IHAP+E TPNSV+EIW LATQP FLIY             HFEP CGQTNILVY+GICSL
Sbjct:   122 IHAPKEQTPNSVEEIWNLATQPAFLIYVAITMSIVLALILHFEPLCGQTNILVYIGICSL 181

Query:   184 MGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAI 243
             MG+LTV+SIKAIGIAIKLT++G+SQI YPQTW F+ VA  CVVTQL YLNKALDTFNAAI
Sbjct:   182 MGALTVMSIKAIGIAIKLTMEGVSQIGYPQTWLFVMVAVTCVVTQLIYLNKALDTFNAAI 241

Query:   244 VSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTA 303
             VSPVYYVMFTTLTI+ASAIMFKDWSGQD + +ASE+CGFITVL+GT+ILH TRE EQ  A
Sbjct:   242 VSPVYYVMFTTLTIVASAIMFKDWSGQDAASVASELCGFITVLTGTMILHGTREEEQQQA 301

Query:   304 PVGTVTWYVSGDSLKGAEEEHLITIHNSDY 333
                 V WY   DS K   EEHL+++++ +Y
Sbjct:   302 SSEHVRWY---DSRKSMNEEHLVSLYSPEY 328

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009625 "response to insect" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

TAIR|locus:2141742 AT4G38730 "AT4G38730" [Arabidopsis thaliana (taxid:3702)]

 Score = 1212 (431.7 bits), Expect = 2.7e-123, P = 2.7e-123
 Identities = 236/331 (71%), Positives = 274/331 (82%)

Query:     3 LSENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTMI 62
             +S+N  GL+LAV+SS FIGSSFILKKKGLKRA A+GTRAG GGYTYLLEPLWW G+VTM 
Sbjct:     2 VSDNEMGLVLAVSSSVFIGSSFILKKKGLKRAAANGTRAGFGGYTYLLEPLWWVGLVTMT 61

Query:    63 VGEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVI 122
              GE+ANFVAYVYAPAVLVTPLGALSIII  AVLAHF+L E+L+KMG+ GC+ CIVGSV+I
Sbjct:    62 FGEIANFVAYVYAPAVLVTPLGALSIIIS-AVLAHFLLDEKLRKMGVWGCVCCIVGSVMI 120

Query:   123 VIHAPQEHTPNSVQEIWALATQPDFLIYXXXXXXXXXXXXXHFEPRCGQTNILVYLGICS 182
             VIHAPQE TPNSV+EIW LA QP FLIY             + EP CGQTNILVY+GICS
Sbjct:   121 VIHAPQEQTPNSVEEIWKLAMQPAFLIYVAISMSIVLALILYCEPLCGQTNILVYIGICS 180

Query:   183 LMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAA 242
             LMGSLTV+SIKA+GIAIKLT +GI+QI YP+TWFF  VAA+CVV Q+ YLNKALDTFNAA
Sbjct:   181 LMGSLTVMSIKAVGIAIKLTFEGINQIWYPETWFFAMVAAICVVMQMIYLNKALDTFNAA 240

Query:   243 IVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTT 302
             IVSP+YYVMFTTLTI+ASAIMFKDW+GQ+   IASEICGFITVL+GT+ILH+TRE EQ +
Sbjct:   241 IVSPIYYVMFTTLTIVASAIMFKDWNGQNTDSIASEICGFITVLTGTVILHSTREEEQAS 300

Query:   303 APVGTVTWYVSGDSLKGAEEEHLITIHNSDY 333
              P   + W  SG S    +EEHL ++++ +Y
Sbjct:   301 -P-RRMRWQDSGKSF---DEEHLTSLYSPEY 326

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2009343 AT1G34470 "AT1G34470" [Arabidopsis thaliana (taxid:3702)]

 Score = 1027 (366.6 bits), Expect = 1.1e-103, P = 1.1e-103
 Identities = 184/305 (60%), Positives = 242/305 (79%)

Query:     4 SENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTMIV 63
             S+N KGL+LA++SS FIG+SFI+KKKGLKRAGASG RAG GGY+YLLEPLWW GM+TMIV
Sbjct:    17 SDNIKGLVLALSSSLFIGASFIVKKKGLKRAGASGLRAGSGGYSYLLEPLWWVGMITMIV 76

Query:    64 GEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIV 123
             GE+ANF AY +APA+LVTPLGALSIII  A LAH +L E+L   G+LGC+ C+VGS+ IV
Sbjct:    77 GEIANFAAYAFAPAILVTPLGALSIIIS-AALAHVILHEKLHTFGLLGCVLCVVGSITIV 135

Query:   124 IHAPQEHTPNSVQEIWALATQPDFLIYXXXXXXXXXXXXXHFEPRCGQTNILVYLGICSL 183
             +HAPQE   +SV ++W LAT+P FL+Y              F P+ GQ++++VY+G+CSL
Sbjct:   136 LHAPQEQEIDSVLQVWNLATEPAFLLYAAAVVGAAIILIVQFVPQYGQSHVMVYIGVCSL 195

Query:   184 MGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAI 243
             +GSL+V+S+KA+GIA+KLT  G++Q+ YPQTW F  +   CV+TQ+NYLNKALDTFN A+
Sbjct:   196 VGSLSVMSVKALGIALKLTFSGMNQLIYPQTWVFTLIVLTCVITQMNYLNKALDTFNTAV 255

Query:   244 VSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTA 303
             VSP+YYVMFT+LTI+AS IMFKDW  QD + I +E+CGF+T+LSGT +LH T++    ++
Sbjct:   256 VSPIYYVMFTSLTILASVIMFKDWDRQDGTQIVTELCGFVTILSGTFLLHKTKDMVDGSS 315

Query:   304 PVGTV 308
              +G +
Sbjct:   316 SLGNL 320

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2016084 AT1G71900 "AT1G71900" [Arabidopsis thaliana (taxid:3702)]

 Score = 1012 (361.3 bits), Expect = 4.2e-102, P = 4.2e-102
 Identities = 186/294 (63%), Positives = 234/294 (79%)

Query:     4 SENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTMIV 63
             S+N KGL+LA++SS FIG+SFI+KKKGLK+A ++GTRAGVGGY+YL EPLWW GM TM++
Sbjct:    17 SDNIKGLVLALSSSLFIGASFIVKKKGLKKAASTGTRAGVGGYSYLYEPLWWIGMTTMLL 76

Query:    64 GEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIV 123
             GE+ANF AY +APA+LVTPLGA+SIII  AVLAH +L+E+L   GILGC  C+VGS  IV
Sbjct:    77 GEIANFAAYAFAPAILVTPLGAVSIIIS-AVLAHIILREKLHIFGILGCALCVVGSTTIV 135

Query:   124 IHAPQEHTPNSVQEIWALATQPDFLIYXXXXXXXXXXXXXHFEPRCGQTNILVYLGICSL 183
             +HAPQE   +SV E+W LAT+P F+ Y              F P+ GQTN++VY+GICSL
Sbjct:   136 LHAPQEREIDSVIEVWNLATEPAFMFYASLVIGAAVFLIIRFVPQYGQTNVMVYIGICSL 195

Query:   184 MGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAI 243
             +GSL+V+S+KA+GIA+KLT  G +Q+ YPQTW F  V   CVVTQLNYLNKALDTFN AI
Sbjct:   196 VGSLSVMSVKALGIALKLTFSGTNQLFYPQTWIFTLVVLTCVVTQLNYLNKALDTFNTAI 255

Query:   244 VSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATRE 297
             VSP+YYVMFT+LTI+AS IMFKDW  Q+ + I +EICGF+T+LSGT +LH T++
Sbjct:   256 VSPIYYVMFTSLTILASVIMFKDWDRQNGTQIVTEICGFVTILSGTFLLHRTKD 309

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2076186 AT3G23870 "AT3G23870" [Arabidopsis thaliana (taxid:3702)]

 Score = 1009 (360.2 bits), Expect = 8.8e-102, P = 8.8e-102
 Identities = 189/305 (61%), Positives = 234/305 (76%)

Query:     5 ENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTMIVG 64
             +N  G+ILAV+SS FIGSSFI+KKKGLK+AGASG RAG GGY YL EP WWAGM+TMIVG
Sbjct:     7 DNINGVILAVSSSIFIGSSFIIKKKGLKKAGASGVRAGEGGYGYLKEPWWWAGMITMIVG 66

Query:    65 EVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVI 124
             EVANF AY +APA+LVTPLGALSII   AVLAHF+LKE+L   GILGCI C+VGS  IV+
Sbjct:    67 EVANFAAYAFAPAILVTPLGALSIIFS-AVLAHFILKEKLHMFGILGCILCVVGSTTIVL 125

Query:   125 HAPQEHTPNSVQEIWALATQPDFLIYXXXXXXXXXXXXXHFEPRCGQTNILVYLGICSLM 184
             HAP E    SV++IW LA +P FL+Y             ++EPR G+T+++VY+GICSLM
Sbjct:   126 HAPHEQKIESVKQIWQLAIEPGFLVYSAVIVIVVAILIFYYEPRYGKTHMIVYVGICSLM 185

Query:   185 GSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIV 244
             GSLTV+S+KA+ IAIKLT  G +Q  Y  TW F+ V A C + Q+NYLNKALDTFN A++
Sbjct:   186 GSLTVMSVKAVAIAIKLTFSGTNQFKYFNTWIFILVVATCCILQINYLNKALDTFNTAVI 245

Query:   245 SPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAP 304
             SPVYYVMFTT TIIAS IMFKDW+ Q    IA+E+CGF+T+LSGT +LH T++   + + 
Sbjct:   246 SPVYYVMFTTFTIIASMIMFKDWASQSGLKIATELCGFVTILSGTFLLHKTKDMGNSASG 305

Query:   305 VGTVT 309
              G+++
Sbjct:   306 RGSIS 310

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016036 "cellular response to phosphate starvation" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2136912 AT4G09640 "AT4G09640" [Arabidopsis thaliana (taxid:3702)]

 Score = 1004 (358.5 bits), Expect = 3.0e-101, P = 3.0e-101
 Identities = 185/294 (62%), Positives = 231/294 (78%)

Query:     4 SENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTMIV 63
             S+N KGL+LA++SS FIG+SFI+KKKGLK+AGASG RAG GGY+YLLEPLWW GM+TMIV
Sbjct:    17 SDNVKGLVLALSSSIFIGASFIVKKKGLKKAGASGLRAGSGGYSYLLEPLWWIGMITMIV 76

Query:    64 GEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIV 123
             GE+ANF AY +APA+LVTPLGALSIII  A LAH +L+E+L   GILGC  CIVGSV IV
Sbjct:    77 GEIANFAAYAFAPAILVTPLGALSIIIS-ASLAHIILQEKLHTFGILGCALCIVGSVTIV 135

Query:   124 IHAPQEHTPNSVQEIWALATQPDFLIYXXXXXXXXXXXXXHFEPRCGQTNILVYLGICSL 183
             +HAPQE    SV E+W LAT+P FL Y              F P  GQ++++VY+G+CSL
Sbjct:   136 LHAPQEQDIVSVLEVWNLATEPAFLFYAAAVVGAAIVLIVQFIPLYGQSHVMVYIGVCSL 195

Query:   184 MGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAI 243
             +GSL+V+S+KA+GIA+KLT  G +Q+ YPQTW F  +   CV+TQ+NYLNKALDTFN A+
Sbjct:   196 IGSLSVMSVKALGIALKLTFSGTNQLGYPQTWVFTVIVLFCVITQMNYLNKALDTFNTAV 255

Query:   244 VSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATRE 297
             VSP+YYVMFT+LTI+AS IMFKDW  Q  + I +E+CGF+T+LSGT +LH T +
Sbjct:   256 VSPIYYVMFTSLTILASVIMFKDWDRQSGTQIMTELCGFVTILSGTFLLHTTTD 309

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2119540 AT4G13800 [Arabidopsis thaliana (taxid:3702)]

 Score = 988 (352.9 bits), Expect = 1.5e-99, P = 1.5e-99
 Identities = 182/305 (59%), Positives = 232/305 (76%)

Query:     5 ENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTMIVG 64
             +N  G+ILAV+SS FIGSSFI+KKKGLK+AG SG RAG GGY YL EP WWAGM+TMIVG
Sbjct:     7 DNIHGVILAVSSSIFIGSSFIIKKKGLKKAGVSGARAGEGGYGYLYEPWWWAGMITMIVG 66

Query:    65 EVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVI 124
             E+ANF AY +APA+LVTPLGALSII   AVLAHF+L+E+L   GILGC+ C+VGS  IV+
Sbjct:    67 EIANFAAYAFAPAILVTPLGALSIIFS-AVLAHFILEEKLHMFGILGCVLCVVGSTTIVL 125

Query:   125 HAPQEHTPNSVQEIWALATQPDFLIYXXXXXXXXXXXXXHFEPRCGQTNILVYLGICSLM 184
             HAP E    SV+++W LAT+P FL Y             ++EPR G+T+++VY+GICSLM
Sbjct:   126 HAPHEQGIESVKQVWHLATEPGFLAYSAVVLVVVLALIFYYEPRYGKTHMIVYVGICSLM 185

Query:   185 GSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIV 244
             GSLTV+S+KA+ IAIKLT  G++Q  Y   W F+ V  +C + Q+NYLNKALD FN A++
Sbjct:   186 GSLTVMSVKAVAIAIKLTFSGMNQFKYFHAWIFIIVVTICCILQINYLNKALDNFNTAVI 245

Query:   245 SPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAP 304
             SPVYYVMFTT TI+AS IMFKDW+ Q    IA+E+CGF+T+LSGT +LH T++   +T+ 
Sbjct:   246 SPVYYVMFTTFTILASMIMFKDWASQSGLQIATELCGFVTILSGTFLLHKTKDMGNSTSL 305

Query:   305 VGTVT 309
              G+ +
Sbjct:   306 RGSTS 310

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

CGD|CAL0004327 orf19.5352 [Candida albicans (taxid:5476)]

 Score = 728 (261.3 bits), Expect = 5.3e-72, P = 5.3e-72
 Identities = 144/289 (49%), Positives = 194/289 (67%)

Query:     9 GLILAVASSAFIGSSFILKKKGLKRAGA-SGTRAGVGGYTYLLEPLWWAGMVTMIVGEVA 67
             GL LA++SS  IG+SFI+ KKGL  A A +G   GV    YL  P+WW GM+TM +GE+A
Sbjct:     7 GLALAMSSSLAIGTSFIITKKGLMDASARTGGTDGVQASDYLQNPIWWGGMITMAIGEIA 66

Query:    68 NFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAP 127
             NF AY +APA+LVTPLGALS+II  AVLA   LKERL  +G +GC  C++GSV+I++HAP
Sbjct:    67 NFAAYTFAPAILVTPLGALSVIIG-AVLAAIFLKERLGTLGKMGCAICLMGSVIIILHAP 125

Query:   128 QEHTPNSVQEIWALATQPDFLIYXXXXXXXXXXXXXHFEPRCGQTNILVYLGICSLMGSL 187
              +    +V EI   ATQP F+ Y                P+ G TN ++YL ICS +GS+
Sbjct:   126 PDKEVQTVDEILGYATQPGFMFYCTVVTLYSLFMIYKIVPKYGNTNPMIYLSICSSVGSI 185

Query:   188 TVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPV 247
             +V+SIKA GIA+KLTL G +Q  +  T+ FL V A+C+VTQ+NY NKALD F+ +IV+P+
Sbjct:   186 SVMSIKAFGIALKLTLGGNNQFTHVSTYLFLIVVALCIVTQMNYFNKALDQFDTSIVNPL 245

Query:   248 YYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATR 296
             YYV FTT T+ AS I+FK ++      I S + GF+ + SG  +L+ +R
Sbjct:   246 YYVTFTTFTLAASFILFKGFNTSSAVDIISLLIGFLIIFSGVYLLNISR 294

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q5A5P7 CaO19.12812 "Putative uncharacterized protein" [Candida albicans SC5314 (taxid:237561)]

 Score = 728 (261.3 bits), Expect = 5.3e-72, P = 5.3e-72
 Identities = 144/289 (49%), Positives = 194/289 (67%)

Query:     9 GLILAVASSAFIGSSFILKKKGLKRAGA-SGTRAGVGGYTYLLEPLWWAGMVTMIVGEVA 67
             GL LA++SS  IG+SFI+ KKGL  A A +G   GV    YL  P+WW GM+TM +GE+A
Sbjct:     7 GLALAMSSSLAIGTSFIITKKGLMDASARTGGTDGVQASDYLQNPIWWGGMITMAIGEIA 66

Query:    68 NFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAP 127
             NF AY +APA+LVTPLGALS+II  AVLA   LKERL  +G +GC  C++GSV+I++HAP
Sbjct:    67 NFAAYTFAPAILVTPLGALSVIIG-AVLAAIFLKERLGTLGKMGCAICLMGSVIIILHAP 125

Query:   128 QEHTPNSVQEIWALATQPDFLIYXXXXXXXXXXXXXHFEPRCGQTNILVYLGICSLMGSL 187
              +    +V EI   ATQP F+ Y                P+ G TN ++YL ICS +GS+
Sbjct:   126 PDKEVQTVDEILGYATQPGFMFYCTVVTLYSLFMIYKIVPKYGNTNPMIYLSICSSVGSI 185

Query:   188 TVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPV 247
             +V+SIKA GIA+KLTL G +Q  +  T+ FL V A+C+VTQ+NY NKALD F+ +IV+P+
Sbjct:   186 SVMSIKAFGIALKLTLGGNNQFTHVSTYLFLIVVALCIVTQMNYFNKALDQFDTSIVNPL 245

Query:   248 YYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATR 296
             YYV FTT T+ AS I+FK ++      I S + GF+ + SG  +L+ +R
Sbjct:   246 YYVTFTTFTLAASFILFKGFNTSSAVDIISLLIGFLIIFSGVYLLNISR 294

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|I3LR53 LOC100520441 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
 Identities = 147/319 (46%), Positives = 204/319 (63%)

Query:     9 GLILAVASSAFIGSSFILKKKGLKRAGASG-TRAGVGGYTYLLEPLWWAGMVTMIVGEVA 67
             GL+LA++SS FIGSSFILKKKGL +    G TRAG GG++YL E LWWAG+++M  GE A
Sbjct:    71 GLVLAISSSIFIGSSFILKKKGLLQLANKGVTRAGQGGHSYLKEWLWWAGLLSMGAGEAA 130

Query:    68 NFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAP 127
             NF AY +APA LVTPLGALS++I  A+L+ + L E L   G LGCI  I+GS V+VIHAP
Sbjct:   131 NFAAYAFAPATLVTPLGALSVLISSAILSSYFLNEHLNIHGKLGCILSILGSTVMVIHAP 190

Query:   128 QEHTPNSVQEIWALATQPDFLIYXXXXXXXXXXXXXHFEPRCGQTNILVYLGICSLMGSL 187
             QE    S+ E+      P F+ +                P+ GQTNILVY+ ICSL+G+ 
Sbjct:   191 QEEEVASLHEMEMKLRDPGFISFAVIITVISLVLILIVAPKKGQTNILVYISICSLIGAF 250

Query:   188 TVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPV 247
             +V S+K +GIAIK  L+      +P  +  L V  + V TQ+NYLNKALDTFN ++V+P+
Sbjct:   251 SVSSVKGLGIAIKELLEWKPVYKHPLVFVLLAVLVLSVTTQINYLNKALDTFNTSLVTPI 310

Query:   248 YYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPVGT 307
             YYV FT++ +  S I+F++W G     I   + GF T+++G  +LHA +  + T + + T
Sbjct:   311 YYVFFTSMVVTCSVILFQEWYGMKAGDIIGTLSGFFTIINGIFLLHAFKNIDITWSDLTT 370

Query:   308 VTWYVSGDSLKGAEEEHLI 326
              T      SL G E+++++
Sbjct:   371 NT-QKEVFSLNGHEDKYIL 388

GO:0016020 "membrane" evidence=IEA

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9JJC8	NIPA2_MOUSE	No assigned EC number	0.4896	0.8571	0.8022	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	336
pfam05653	300	pfam05653, Mg_trans_NIPA, Magnesium transporter NI	1e-150

>gnl|CDD|114381 pfam05653, Mg_trans_NIPA, Magnesium transporter NIPA

 Score =  425 bits (1094), Expect = e-150
 Identities = 193/299 (64%), Positives = 226/299 (75%), Gaps = 1/299 (0%)

Query: 4   SENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTMIV 63
           ++N  GLILAV+SS FIGSSFI+KKKGL R    G RAG GGY YL E LWWAG++TMIV
Sbjct: 3   TDNYIGLILAVSSSIFIGSSFIIKKKGLLRLARGGMRAGEGGYGYLKEWLWWAGLLTMIV 62

Query: 64  GEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIV 123
           GE ANF AY +APA LVTPLGALS+II  AVL+ F L E+L   G LGC+ CIVGS VIV
Sbjct: 63  GEAANFAAYAFAPATLVTPLGALSVIIS-AVLSSFFLNEKLNLFGKLGCVLCIVGSTVIV 121

Query: 124 IHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSL 183
           IHAP+E    SV+E+W LAT P FL+YV   V VVL L+   EPR GQTNILVY+ ICSL
Sbjct: 122 IHAPKEQEIESVREVWNLATDPGFLVYVILVVGVVLILIFFVEPRHGQTNILVYITICSL 181

Query: 184 MGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAI 243
           +GSLTV+S+KA+GIAIKLT  G +Q+ YPQ W FL V   CVVTQ+NYLNKALD FN +I
Sbjct: 182 IGSLTVMSVKALGIAIKLTFSGKNQLGYPQFWIFLVVVVTCVVTQINYLNKALDIFNTSI 241

Query: 244 VSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTT 302
           V+PVYYV FTT  I ASAI+FK+W GQ    IA E+CGF T+L GT +LHATR+ E + 
Sbjct: 242 VTPVYYVFFTTSVIAASAILFKEWLGQSFDDIAGELCGFFTILLGTFLLHATRDIEFSQ 300

NIPA (nonimprinted in Prader-Willi/Angelman syndrome) is a family of integral membrane proteins which function as magnesium transporters. Length = 300

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	336
KOG2922	335	consensus Uncharacterized conserved protein [Funct	100.0
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	100.0
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.21
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.96
PRK15430	296	putative chloramphenical resistance permease RarD;	98.88
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.87
PLN00411	358	nodulin MtN21 family protein; Provisional	98.83
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.77
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.73
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	98.73
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.7
PRK11689	295	aromatic amino acid exporter; Provisional	98.69
PRK11272	292	putative DMT superfamily transporter inner membran	98.69
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.6
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.49
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.46
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	98.42
COG2510	140	Predicted membrane protein [Function unknown]	98.41
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.29
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	98.13
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.11
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.03
PRK13499	345	rhamnose-proton symporter; Provisional	97.98
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	97.96
PRK10532	293	threonine and homoserine efflux system; Provisiona	97.92
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	97.63
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.62
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.6
KOG4510	346	consensus Permease of the drug/metabolite transpor	97.49
PLN00411	358	nodulin MtN21 family protein; Provisional	97.44
PRK11272	292	putative DMT superfamily transporter inner membran	97.38
PRK11689	295	aromatic amino acid exporter; Provisional	97.37
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.35
COG2510	140	Predicted membrane protein [Function unknown]	97.32
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	97.31
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	97.3
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	97.19
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.18
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.13
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.07
PRK09541	110	emrE multidrug efflux protein; Reviewed	96.95
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	96.65
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.63
PRK11431	105	multidrug efflux system protein; Provisional	96.6
PRK11431	105	multidrug efflux system protein; Provisional	96.57
COG0697	292	RhaT Permeases of the drug/metabolite transporter	96.57
COG2962	293	RarD Predicted permeases [General function predict	96.47
PRK15430	296	putative chloramphenical resistance permease RarD;	96.29
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.27
COG2076	106	EmrE Membrane transporters of cations and cationic	96.23
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	96.22
COG2076	106	EmrE Membrane transporters of cations and cationic	96.15
KOG2765	416	consensus Predicted membrane protein [Function unk	95.92
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	95.67
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	95.42
PF13536	113	EmrE: Multidrug resistance efflux transporter	95.37
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	95.35
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	95.0
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	94.76
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	94.18
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	93.58
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	93.5
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	93.44
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	93.37
KOG3912	372	consensus Predicted integral membrane protein [Gen	92.99
KOG2766	336	consensus Predicted membrane protein [Function unk	92.02
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	91.87
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	90.76
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	90.03
PRK02237	109	hypothetical protein; Provisional	89.41
COG1742	109	Uncharacterized conserved protein [Function unknow	89.21
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	87.97
KOG4831	125	consensus Unnamed protein [Function unknown]	87.85
PRK13499	345	rhamnose-proton symporter; Provisional	83.22
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	80.9

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=7.8e-68  Score=497.84  Aligned_cols=302  Identities=66%  Similarity=1.124  Sum_probs=293.1

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHhHHhhhccCCCccCCCccccchhhhHHHHHHHHHHHHHHHHHHHhhcchhHhhh
Q 019718            3 LSENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTMIVGEVANFVAYVYAPAVLVTP   82 (336)
Q Consensus         3 ~~~~~iGv~LAl~sa~~~a~G~vlqk~~~~~~~~~~~~~~~~~~~~~~~p~W~~G~~~~~~g~~~~~~al~~ap~slV~P   82 (336)
                      +.++++|+.+|+.||++++.++++|||+++|..+.+.|++.+..+|++.|.||+|++.|++|+++||+||+|||+++|+|
T Consensus        16 ~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~~~~ra~~gg~~yl~~~~Ww~G~ltm~vGei~NFaAYaFAPasLVtP   95 (335)
T KOG2922|consen   16 SSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGASGLRAGEGGYGYLKEPLWWAGMLTMIVGEIANFAAYAFAPASLVTP   95 (335)
T ss_pred             ccCceeeeeehhhccEEEeeehhhhHHHHHHHhhhcccccCCCcchhhhHHHHHHHHHHHHHhHhhHHHHhhchHhhhcc
Confidence            57899999999999999999999999999998887788887889999999999999999999999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeEEEEecCCCCCCCCHHHHHHHhcChhHHHHHHHHHHHHHHHh
Q 019718           83 LGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALV  162 (336)
Q Consensus        83 l~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lvv~~~~~~~~~~t~~el~~~~~~~~fl~y~~~~~~~~~~li  162 (336)
                      ||++++++| +++|+++||||++..+.+||++|++|.+++|.|+|++++..|++|+|+++++|+|++|+.+.++++++++
T Consensus        96 LGAlsvi~s-aila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~el~~~~~~~~Fliy~~~iil~~~il~  174 (335)
T KOG2922|consen   96 LGALSVIIS-AILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEEVWELATEPGFLVYVIIIILIVLILI  174 (335)
T ss_pred             chhHHHHHH-HHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccccHHHHHHHhcCccHHHHHHHHHHHHHHHh
Confidence            999999999 9999999999999999999999999999999999999999999999999999999999999999889899


Q ss_pred             heecccCCCcchhhHHHHHHhhhhHHHHHHHHHHHHHHHhhcCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 019718          163 LHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAA  242 (336)
Q Consensus       163 ~~~~~~~g~~~~~~y~~isgllgg~tvl~~K~v~~~l~~~~~g~~~f~~~~~y~ll~~~v~~~~~Q~~~Ln~aL~~~~~~  242 (336)
                      ++++||+|++|+++|..+|+++|++|++++|+++++++++++|++|+.+|++|+++.+++.|+.+|++||||||+.||++
T Consensus       175 ~~~~p~~g~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~~ql~~~~ty~~~l~~~~~~~~Q~~yLNkAL~~fnts  254 (335)
T KOG2922|consen  175 FFYAPRYGQTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGNNQLFYPLTWIFLLVVATCVSTQMNYLNKALDLFNTS  254 (335)
T ss_pred             eeecccccccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             chhhhHHHHHHHHHHHHHHHHhcccCCCChhHHHHHHHHHHHHHHhhhhhccccCCCCCCCCC
Q 019718          243 IVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPV  305 (336)
Q Consensus       243 ~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~~~i~GV~lLs~~~~~~~~~~~~  305 (336)
                      ++.|++|++||+.++++|.|+|+||++.+..+..+++||+.+++.|+++|.+.||.+.+.+..
T Consensus       255 lV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~flL~~~kd~~~~~~s~  317 (335)
T KOG2922|consen  255 IVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFLGIFLLHRTKDMEISLASY  317 (335)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhheeeEeeeecccccccccc
Confidence            999999999999999999999999999999999999999999999999999999998765443

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=100.00  E-value=2.6e-66  Score=495.93  Aligned_cols=297  Identities=46%  Similarity=0.815  Sum_probs=283.9

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhHHhhhccCCCccCCCccccchhhhHHHHHHHHHHHHHHHHHHHhhcchhHhhhh
Q 019718            4 SENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTMIVGEVANFVAYVYAPAVLVTPL   83 (336)
Q Consensus         4 ~~~~iGv~LAl~sa~~~a~G~vlqk~~~~~~~~~~~~~~~~~~~~~~~p~W~~G~~~~~~g~~~~~~al~~ap~slV~Pl   83 (336)
                      +++++|+.+|++||+++++|+++|||+++|+++++.|++.+.++|++||+||+|+.++++|++++++||+|||+++|||+
T Consensus         3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~~~~~~~l~~~~W~~G~~~~~~g~~~~~~Al~~ap~slv~Pl   82 (300)
T PF05653_consen    3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAGSGGRSYLRRPLWWIGLLLMVLGEILNFVALGFAPASLVAPL   82 (300)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHhhHHHHHHHHHHhcchHHHHHHHHhhhHHHHHHH
Confidence            57899999999999999999999999999988765555445689999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeEEEEecCCCCCCCCHHHHHHHhcChhHHHHHHHHHHHHHHHhh
Q 019718           84 GALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVL  163 (336)
Q Consensus        84 ~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lvv~~~~~~~~~~t~~el~~~~~~~~fl~y~~~~~~~~~~li~  163 (336)
                      +++++++| ++++++++|||++++|++|++++++|+++++.++|++++.+|++|+++++++|+|+.|+.+..++.+.+++
T Consensus        83 g~~~lv~~-~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~~~l~~~~~~~~fl~y~~~~~~~~~~L~~  161 (300)
T PF05653_consen   83 GALSLVFN-AVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHTLDELIALLSQPGFLVYFILVLVLILILIF  161 (300)
T ss_pred             HhhhhhhH-HHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCCHHHHHHHhcCcceehhHHHHHHHHHHHHH
Confidence            99999999 99999999999999999999999999999999999999999999999999999999999888887777777


Q ss_pred             eecccCCCcchhhHHHHHHhhhhHHHHHHHHHHHHHHHhhcCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhccccccc
Q 019718          164 HFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAI  243 (336)
Q Consensus       164 ~~~~~~g~~~~~~y~~isgllgg~tvl~~K~v~~~l~~~~~g~~~f~~~~~y~ll~~~v~~~~~Q~~~Ln~aL~~~~~~~  243 (336)
                      +.+||+|+++.++|.++||++|++|++++|++++.++++++|++||.+|.+|++++++++|++.|++|||+||++||++.
T Consensus       162 ~~~~r~g~~~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~~~f~~~~~y~l~~~~v~~~~~Q~~~LN~aL~~fd~~~  241 (300)
T PF05653_consen  162 FIKPRYGRRNILVYISICSLIGSFTVLSAKAISILIKLTFSGDNQFTYPLTYLLLLVLVVTAVLQLYYLNKALKRFDTSL  241 (300)
T ss_pred             hhcchhcccceEEEEEEeccccchhhhHHHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccceE
Confidence            88899999999999999999999999999999999999889999999999999999999999999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHHHhcccCCCChhHHHHHHHHHHHHHHhhhhhccccCCCCC
Q 019718          244 VSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQT  301 (336)
Q Consensus       244 v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~~~i~GV~lLs~~~~~~~~  301 (336)
                      ++|++|++||++++++|+++|||+++++++++.++.+|+.++++||++|++++|.++.
T Consensus       242 V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~lL~~~~~~~~~  299 (300)
T PF05653_consen  242 VVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFLLSSSKDKEIS  299 (300)
T ss_pred             EEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhheeeccCchhcc
Confidence            9999999999999999999999999999999999999999999999999999998764

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.21  E-value=2.5e-09  Score=101.24  Aligned_cols=252  Identities=17%  Similarity=0.172  Sum_probs=144.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHhHHhhhccC-C-----------C----ccCCCccccchhhhH---HHHHHHHHHHHHHHHH
Q 019718           10 LILAVASSAFIGSSFILKKKGLKRAGAS-G-----------T----RAGVGGYTYLLEPLW---WAGMVTMIVGEVANFV   70 (336)
Q Consensus        10 v~LAl~sa~~~a~G~vlqk~~~~~~~~~-~-----------~----~~~~~~~~~~~~p~W---~~G~~~~~~g~~~~~~   70 (336)
                      ..+.+.++++.|...++.||..++++.- .           +    +.....++..++..|   ..+......+..+...
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKEPDFLWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQ   82 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHH
Confidence            5688899999999999999754443210 0           0    000000111112222   1233335566678888


Q ss_pred             HHhhcchhHhhhhhhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeEEEEecCCCCCCCCHHHHHHHhcChhHHHH
Q 019718           71 AYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIY  150 (336)
Q Consensus        71 al~~ap~slV~Pl~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lvv~~~~~~~~~~t~~el~~~~~~~~fl~y  150 (336)
                      ++..+|.+..+|+...+.+++ .+++.+++|||+++++|.|..++..|+.++..  ++.++ .+.         .+. .+
T Consensus        83 a~~~~~~~~~~~l~~~~p~~~-~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~--~~~~~-~~~---------~g~-~~  148 (281)
T TIGR03340        83 AYHHADVGLVYPLARSSPLLV-AIWATLTLGETLSPLAWLGILIITLGLLVLGL--SRFAQ-HRR---------KAY-AW  148 (281)
T ss_pred             HHhcCChhhhhhHHhhhHHHH-HHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc--ccccc-cch---------hHH-HH
Confidence            999999999999999999999 99999999999999999999999999876643  22211 111         111 11


Q ss_pred             HHHHHHHHHHHhhe-ecccCCCc-----chhhHHHHHHhhhhH-HHHHHHHHHHHHHHhhcCCcc-cchhHHHHHHHHHH
Q 019718          151 VAATVSVVLALVLH-FEPRCGQT-----NILVYLGICSLMGSL-TVVSIKAIGIAIKLTLDGISQ-IAYPQTWFFLTVAA  222 (336)
Q Consensus       151 ~~~~~~~~~~li~~-~~~~~g~~-----~~~~y~~isgllgg~-tvl~~K~v~~~l~~~~~g~~~-f~~~~~y~ll~~~v  222 (336)
                      ..+.  .++.-.+. ..++..++     ....+...+-++++. ......     .   .++.+. ...+..+.++....
T Consensus       149 ~l~a--al~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~---~~~~~~~~~~~~~~~~~~~~~  218 (281)
T TIGR03340       149 ALAA--ALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYL-----K---RHGRSMFPYARQILPSATLGG  218 (281)
T ss_pred             HHHH--HHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHH-----H---HhccchhhhHHHHHHHHHHHH
Confidence            1111  11111111 12221111     111121122122211 111100     0   011111 11222233333333


Q ss_pred             HHHHHHHHHHHHhhccccccchhhhHHHHHHHHHHHHHHHHhcccCCCChhHHHHHHHHHHHHHHhhhhh
Q 019718          223 VCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIIL  292 (336)
Q Consensus       223 ~~~~~Q~~~Ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~~~i~GV~lL  292 (336)
                      .+........++++++.+++.+.+..|. .++.+++.|.++++|..+  +.    ...|.++++.|++++
T Consensus       219 ~~s~l~~~l~~~al~~~~a~~~~~~~~l-~pv~a~l~g~~~lgE~~~--~~----~~iG~~lil~Gv~l~  281 (281)
T TIGR03340       219 LMIGGAYALVLWAMTRLPVATVVALRNT-SIVFAVVLGIWFLNERWY--LT----RLMGVCIIVAGLVVL  281 (281)
T ss_pred             HHHHHHHHHHHHHHhhCCceEEEeeccc-HHHHHHHHHHHHhCCCcc--HH----HHHHHHHHHHhHHhC
Confidence            4444455678899999999998888766 488899999999999543  33    446667788888764

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.96  E-value=1e-07  Score=91.09  Aligned_cols=257  Identities=18%  Similarity=0.211  Sum_probs=139.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhHHhhhccC---CCccC---CCccccc------hhhhHHHHHHHHHHHHHHHHHHHhh-cch
Q 019718           11 ILAVASSAFIGSSFILKKKGLKRAGAS---GTRAG---VGGYTYL------LEPLWWAGMVTMIVGEVANFVAYVY-APA   77 (336)
Q Consensus        11 ~LAl~sa~~~a~G~vlqk~~~~~~~~~---~~~~~---~~~~~~~------~~p~W~~G~~~~~~g~~~~~~al~~-ap~   77 (336)
                      .+++.++++-+......|.+..+.+..   ..|..   .-.....      ++.....|+........+.+.++.+ .|.
T Consensus         7 l~~l~~~~~Wg~~~~~~k~~~~~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a   86 (299)
T PRK11453          7 VLALLVVVVWGLNFVVIKVGLHNMPPLMLAGLRFMLVAFPAIFFVARPKVPLNLLLGYGLTISFGQFAFLFCAINFGMPA   86 (299)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCH
Confidence            456777778788888888765433210   01100   0000000      1111122333233333455667666 477


Q ss_pred             hHhhhhhhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeEEEEecCCCCCCCC-HHHHHHHhcChhHHHHHHHHHH
Q 019718           78 VLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNS-VQEIWALATQPDFLIYVAATVS  156 (336)
Q Consensus        78 slV~Pl~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lvv~~~~~~~~~~t-~~el~~~~~~~~fl~y~~~~~~  156 (336)
                      +..+-+.+...+++ .+++++++|||++++++.|+++..+|+.++.. ...++...+ ..++           +.....+
T Consensus        87 ~~a~~l~~~~pi~~-~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~-~~~~~~~~~~~G~~-----------l~l~aal  153 (299)
T PRK11453         87 GLASLVLQAQAFFT-IVLGAFTFGERLQGKQLAGIALAIFGVLVLIE-DSLNGQHVAMLGFM-----------LTLAAAF  153 (299)
T ss_pred             HHHHHHHHhHHHHH-HHHHHHHhcCcCcHHHHHHHHHHHHhHHHhcc-ccCCCcchhHHHHH-----------HHHHHHH
Confidence            78888888899999 99999999999999999999999999876652 111111111 0111           1111111


Q ss_pred             -HHHHHhheecccCC----CcchhhHHHHHHhhhhHHHHHHHHHHHHHHHhhcCC-----c-ccchhHH-HHHHHHHHHH
Q 019718          157 -VVLALVLHFEPRCG----QTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGI-----S-QIAYPQT-WFFLTVAAVC  224 (336)
Q Consensus       157 -~~~~li~~~~~~~g----~~~~~~y~~isgllgg~tvl~~K~v~~~l~~~~~g~-----~-~f~~~~~-y~ll~~~v~~  224 (336)
                       ..+..  ...+|..    ......+.....++++.-...   .+. .   .++.     + ...++.. +.++...+.+
T Consensus       154 ~~a~~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~---~~~~~~~~~~~~~~~~~~~~~l~~l~i~~  224 (299)
T PRK11453        154 SWACGN--IFNKKIMSHSTRPAVMSLVVWSALIPIIPFFV---ASL-I---LDGSATMIHSLVTIDMTTILSLMYLAFVA  224 (299)
T ss_pred             HHHHHH--HHHHHHhcccCccchhHHHHHHHHHHHHHHHH---HHH-H---hcCchhhhhhhccCCHHHHHHHHHHHHHH
Confidence             11111  1112211    111122222222222211110   000 0   1111     0 0112333 3345555677


Q ss_pred             HHHHHHHHHHhhccccccchhhhHHHHHHHHHHHHHHHHhcccCCCChhHHHHHHHHHHHHHHhhhhhcccc
Q 019718          225 VVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATR  296 (336)
Q Consensus       225 ~~~Q~~~Ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~~~i~GV~lLs~~~  296 (336)
                      +..+....++++++.++..+.++ ....|+++++.|.++++|..  ++.+    .+|.+++++|+++....+
T Consensus       225 t~~~~~l~~~~l~~~~a~~~s~~-~~l~Pv~a~~~~~l~lgE~~--~~~~----~iG~~lI~~gv~l~~~~~  289 (299)
T PRK11453        225 TIVGYGIWGTLLGRYETWRVAPL-SLLVPVVGLASAALLLDERL--TGLQ----FLGAVLIMAGLYINVFGL  289 (299)
T ss_pred             HHHHHHHHHHHHHhCCHHHHHHH-HHHHHHHHHHHHHHHhCCCc--cHHH----HHHHHHHHHHHHHHhcch
Confidence            77788889999999999877775 46889999999999999954  3443    567778888888765544

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.88  E-value=1.4e-07  Score=89.99  Aligned_cols=121  Identities=20%  Similarity=0.108  Sum_probs=90.9

Q ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHHHHhHHhhhccC---CCcc--------------C--CCccccchhhhH----HHH
Q 019718            1 MGLSENSKGLILAVASSAFIGSSFILKKKGLKRAGAS---GTRA--------------G--VGGYTYLLEPLW----WAG   57 (336)
Q Consensus         1 ~~~~~~~iGv~LAl~sa~~~a~G~vlqk~~~~~~~~~---~~~~--------------~--~~~~~~~~~p~W----~~G   57 (336)
                      |.|++...|..+.+.++++.+...+.-|.. .+.+..   -.|.              +  ...++..+++++    ..|
T Consensus         1 ~~~~~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (296)
T PRK15430          1 MDAKQTRQGVLLALAAYFIWGIAPAYFKLI-YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVS   79 (296)
T ss_pred             CCchhhhhHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHH
Confidence            789999999999999999999888888753 211100   0000              0  000001112222    255


Q ss_pred             HHHHHHHHHHHHHHHhhcchhHhhhhhhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeEEE
Q 019718           58 MVTMIVGEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIV  123 (336)
Q Consensus        58 ~~~~~~g~~~~~~al~~ap~slV~Pl~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lvv  123 (336)
                      .....++..+.+.++...|.+...-+....-++. .+++.+++|||+++++|.|+++..+|++++.
T Consensus        80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v-~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVN-IVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHH-HHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            5667778889999999999999999999999999 9999999999999999999999999987653

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.87  E-value=1.7e-07  Score=89.51  Aligned_cols=224  Identities=8%  Similarity=0.092  Sum_probs=139.1

Q ss_pred             hhhHHHHHHH---HHHHHHHHHHHHhhcchhHhhhhhh-hHHHHHHHHHHHHHhcccccccc----hhhHHHhhcceeEE
Q 019718           51 EPLWWAGMVT---MIVGEVANFVAYVYAPAVLVTPLGA-LSIIIRYAVLAHFMLKERLQKMG----ILGCITCIVGSVVI  122 (336)
Q Consensus        51 ~p~W~~G~~~---~~~g~~~~~~al~~ap~slV~Pl~a-~~lv~~~~~la~~~l~e~~~~~~----~~G~~li~~G~~lv  122 (336)
                      ...|..|+..   ...|+++.+.|.....+++-.|+.. +.++++ .+.+.+++||+.++++    +.|.+++++|+.++
T Consensus        56 ~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~-~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~  134 (290)
T TIGR00776        56 LSIFLVGLLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGG-TLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLT  134 (290)
T ss_pred             cHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHH-HHHHHHHhhhccchHHHHHHHHHHHHHHHhHheE
Confidence            4455668776   8899999999999999999999999 999999 9999999999999999    99999999998877


Q ss_pred             EEecCCCCCCCCHHHHHHHhcChhHHHHHHHHHHHHHHHhheecccCCCcchh--hHHHHHHhhhhHHHHHHHHHHHHHH
Q 019718          123 VIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNIL--VYLGICSLMGSLTVVSIKAIGIAIK  200 (336)
Q Consensus       123 v~~~~~~~~~~t~~el~~~~~~~~fl~y~~~~~~~~~~li~~~~~~~g~~~~~--~y~~isgllgg~tvl~~K~v~~~l~  200 (336)
                      ....+++.+   .++...   .+.=+.+..+..+  ..-.+..-+|+-..++.  .+....|++.+-.++...-.    +
T Consensus       135 ~~~~~~~~~---~~~~~~---~~~Gi~~~l~sg~--~y~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----~  202 (290)
T TIGR00776       135 SRSKDKSAG---IKSEFN---FKKGILLLLMSTI--GYLVYVVVAKAFGVDGLSVLLPQAIGMVIGGIIFNLGHI----L  202 (290)
T ss_pred             Eeccccccc---cccccc---hhhHHHHHHHHHH--HHHHHHHHHHHcCCCcceehhHHHHHHHHHHHHHHHHHh----c
Confidence            554322211   011000   0111222222111  11111112221111221  11223333222222221110    0


Q ss_pred             HhhcCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhhHHHHHHHHHHHHHHHHhcccCCCChhHHHHHHH
Q 019718          201 LTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEIC  280 (336)
Q Consensus       201 ~~~~g~~~f~~~~~y~ll~~~v~~~~~Q~~~Ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~  280 (336)
                         .  ..+.....+..++..+. ...+..+...+++++......++.....++++.+.|..+++|..  ++.++..+.+
T Consensus       203 ---~--~~~~~~~~~~~~~~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~--~~~~~~~~~i  274 (290)
T TIGR00776       203 ---A--KPLKKYAILLNILPGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKK--TKREMIAISV  274 (290)
T ss_pred             ---c--cchHHHHHHHHHHHHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCC--CcceeehhHH
Confidence               0  11222233333334444 35566667777775555566666777779999999999999965  4789999999


Q ss_pred             HHHHHHHhhhhhccc
Q 019718          281 GFITVLSGTIILHAT  295 (336)
Q Consensus       281 G~~~~i~GV~lLs~~  295 (336)
                      |+++++.|+++++-.
T Consensus       275 G~~lIi~~~~l~~~~  289 (290)
T TIGR00776       275 GIILIIIAANILGIG  289 (290)
T ss_pred             HHHHHHHHHHHHhcc
Confidence            999999999988754

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.83  E-value=8.8e-07  Score=87.34  Aligned_cols=226  Identities=13%  Similarity=0.146  Sum_probs=119.6

Q ss_pred             HHHHHHHHHhhcchhHhhhhhhhHHHHHHHHHHHHH------hcccccccchhhHHHhhcceeEEEEecCCC------CC
Q 019718           64 GEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFM------LKERLQKMGILGCITCIVGSVVIVIHAPQE------HT  131 (336)
Q Consensus        64 g~~~~~~al~~ap~slV~Pl~a~~lv~~~~~la~~~------l~e~~~~~~~~G~~li~~G~~lvv~~~~~~------~~  131 (336)
                      ...+.+.++.+.|.+...=+.....+++ ++++.++      +|||++++++.|++++.+|+.++...+...      +.
T Consensus        91 ~~~~~~~gl~~tsa~~asll~~~~P~~~-~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~  169 (358)
T PLN00411         91 YVITGYIGIEYSNPTLASAISNITPALT-FILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPP  169 (358)
T ss_pred             HHHHHHHHHhhccHHHHHHHHHhhHHHH-HHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccc
Confidence            3446788999999999999999999999 9999999      699999999999999999987654322110      00


Q ss_pred             CCCHHHHH--HHhcChhHHHHHHHHHH-HHHHHhh-eecccCCCc--chhhHHHHHHhhhhHHHHHHHHHHHHHHHhhcC
Q 019718          132 PNSVQEIW--ALATQPDFLIYVAATVS-VVLALVL-HFEPRCGQT--NILVYLGICSLMGSLTVVSIKAIGIAIKLTLDG  205 (336)
Q Consensus       132 ~~t~~el~--~~~~~~~fl~y~~~~~~-~~~~li~-~~~~~~g~~--~~~~y~~isgllgg~tvl~~K~v~~~l~~~~~g  205 (336)
                      ..+..+..  ....+.....-..+... .++.-++ ...+|..++  ....+....+++++.-....-.    +.+..+.
T Consensus       170 ~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l----~~~~~~~  245 (358)
T PLN00411        170 YLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGL----VVEKNNP  245 (358)
T ss_pred             cccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHH----HHccCCc
Confidence            00000000  00000001101111111 1111011 111221111  1122222223333222211111    1110000


Q ss_pred             Ccccc--hhHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhhHHHHHHHHHHHHHHHHhcccCCCChhHHHHHHHHHH
Q 019718          206 ISQIA--YPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFI  283 (336)
Q Consensus       206 ~~~f~--~~~~y~ll~~~v~~~~~Q~~~Ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~  283 (336)
                      .....  .+..+.++...+.+.+ -..+.|+++++-+++... ++.-..|+++++.|.++++|..  ++.    ..+|.+
T Consensus       246 ~~~~~~~~~~~~~i~y~~i~t~l-ay~lw~~~v~~~ga~~as-~~~~L~PV~a~llg~l~LgE~l--t~~----~~iG~~  317 (358)
T PLN00411        246 SVWIIHFDITLITIVTMAIITSV-YYVIHSWTVRHKGPLYLA-IFKPLSILIAVVMGAIFLNDSL--YLG----CLIGGI  317 (358)
T ss_pred             ccceeccchHHHHHHHHHHHHHH-HHHHHHHHHhccCchHHH-HHHhHHHHHHHHHHHHHhCCCC--cHH----HHHHHH
Confidence            00111  1122222222223333 334688999998887644 4456778889999999999954  344    347888


Q ss_pred             HHHHhhhhhccccCCCCCC
Q 019718          284 TVLSGTIILHATREHEQTT  302 (336)
Q Consensus       284 ~~i~GV~lLs~~~~~~~~~  302 (336)
                      +++.|+.+..+.+..|.++
T Consensus       318 LIl~Gv~l~~~~~~~~~~~  336 (358)
T PLN00411        318 LITLGFYAVMWGKANEEKD  336 (358)
T ss_pred             HHHHHHHHHHhhhhhhhhh
Confidence            8999999988766555443

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.77  E-value=2.5e-08  Score=84.67  Aligned_cols=115  Identities=17%  Similarity=0.162  Sum_probs=94.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHhhhccCCCccC-CCccccchhh--hHHHHHHHHHHHHHHHHHHHhhcchhHhhhhh
Q 019718            8 KGLILAVASSAFIGSSFILKKKGLKRAGASGTRAG-VGGYTYLLEP--LWWAGMVTMIVGEVANFVAYVYAPAVLVTPLG   84 (336)
Q Consensus         8 iGv~LAl~sa~~~a~G~vlqk~~~~~~~~~~~~~~-~~~~~~~~~p--~W~~G~~~~~~g~~~~~~al~~ap~slV~Pl~   84 (336)
                      +|.++.+.+.++.+.|..+-|++.++.++.+.... ........+|  .-+.|+.++++++.++..++...|++...|+-
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~~~~~~~~~~~p~~~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~   81 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHAWDFIAALLAFGLALRAVLLGLAGYALSMLCWLKALRYLPLSRAYPLL   81 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccchhHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHH
Confidence            46778889999999999999999887664221110 0011234567  77899999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHH--HhcccccccchhhHHHhhcceeEEE
Q 019718           85 ALSIIIRYAVLAHF--MLKERLQKMGILGCITCIVGSVVIV  123 (336)
Q Consensus        85 a~~lv~~~~~la~~--~l~e~~~~~~~~G~~li~~G~~lvv  123 (336)
                      +...++. .+.+..  ++||+++..++.|++++++|+.++.
T Consensus        82 sl~~~~v-~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~  121 (129)
T PRK02971         82 SLSYALV-YLAAMLLPWFNETFSLKKTLGVACIMLGVWLIN  121 (129)
T ss_pred             HHHHHHH-HHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            9998888 888885  7999999999999999999987764

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.73  E-value=2.2e-06  Score=79.29  Aligned_cols=203  Identities=16%  Similarity=0.157  Sum_probs=119.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcchhHhhhhhhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeEEEEecCCCCCCCC
Q 019718           55 WAGMVTMIVGEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNS  134 (336)
Q Consensus        55 ~~G~~~~~~g~~~~~~al~~ap~slV~Pl~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lvv~~~~~~~~~~t  134 (336)
                      ..|.....+...+.+.|+.+.|.+...++.++..+++ .+++.+++|||++++++.|+.+.++|+.++...+  +.+. +
T Consensus        51 ~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~-~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~--~~~~-~  126 (260)
T TIGR00950        51 LLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYV-TLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDG--NLSI-N  126 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHH-HHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCC--cccc-c
Confidence            4555667788889999999999999999999999999 9999999999999999999999999987765322  1111 1


Q ss_pred             HHHHHHHhcChhHHHHHHHHHHHHHHHhh-eeccc----CCCcchhhHHHHHHhhhhHHHHHHHHHHHHHHHhhcCCccc
Q 019718          135 VQEIWALATQPDFLIYVAATVSVVLALVL-HFEPR----CGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQI  209 (336)
Q Consensus       135 ~~el~~~~~~~~fl~y~~~~~~~~~~li~-~~~~~----~g~~~~~~y~~isgllgg~tvl~~K~v~~~l~~~~~g~~~f  209 (336)
                         .      .+. .+.....  ++.-.+ ...++    .+......+. .....++. .+..-.       ...+.+..
T Consensus       127 ---~------~G~-~~~l~a~--~~~a~~~~~~k~~~~~~~~~~~~~~~-~~~~~~~~-~l~~~~-------~~~~~~~~  185 (260)
T TIGR00950       127 ---P------AGL-LLGLGSG--ISFALGTVLYKRLVKKEGPELLQFTG-WVLLLGAL-LLLPFA-------WFLGPNPQ  185 (260)
T ss_pred             ---H------HHH-HHHHHHH--HHHHHHHHHHhHHhhcCCchHHHHHH-HHHHHHHH-HHHHHH-------HhcCCCCC
Confidence               0      011 1111111  111111 11121    1111112221 11111211 111111       11222212


Q ss_pred             chhHHHH-HHHHHHHHHHHHHHHHHHhhccccccchhhhHHHHHHHHHHHHHHHHhcccCCCChhHHHHHHHHHHHHHHh
Q 019718          210 AYPQTWF-FLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSG  288 (336)
Q Consensus       210 ~~~~~y~-ll~~~v~~~~~Q~~~Ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~~~i~G  288 (336)
                      .++..|. ++...+.+........++++++.++..+..+. ...|+.+.+.+.++++|.  .++.+    ..|.++++.|
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~-~~~pv~~~ll~~~~~~E~--~~~~~----~~G~~li~~g  258 (260)
T TIGR00950       186 ALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILA-LAEPLVALLLGLLILGET--LSLPQ----LIGGALIIAA  258 (260)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHH-HHHHHHHHHHHHHHhCCC--CCHHH----HHHHHHHHHh
Confidence            2344443 33344444444555678999998888877765 478888999999999994  44554    3555556665


Q ss_pred             h
Q 019718          289 T  289 (336)
Q Consensus       289 V  289 (336)
                      +
T Consensus       259 ~  259 (260)
T TIGR00950       259 V  259 (260)
T ss_pred             c
Confidence            4

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=98.73  E-value=3.5e-06  Score=82.27  Aligned_cols=233  Identities=21%  Similarity=0.271  Sum_probs=131.9

Q ss_pred             ccchhhhHHHHH--HHHHHHHHHHHHHHhhcchhHhhhhhhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeEEEE
Q 019718           47 TYLLEPLWWAGM--VTMIVGEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVI  124 (336)
Q Consensus        47 ~~~~~p~W~~G~--~~~~~g~~~~~~al~~ap~slV~Pl~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lvv~  124 (336)
                      +..++|.|.-=+  ++.+.|+.....||.+.+.+-+|=|.+.+++++ ++++.++||||.++.+++|+++|++|+++++.
T Consensus        73 ~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~-~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~  151 (334)
T PF06027_consen   73 KVLKRPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFV-MILSFIFLKRRYSWFHILGVLICIAGVVLVVV  151 (334)
T ss_pred             hhcchhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHH-HHHHHHHHHhhhhHHHHHHHHHHHhhhhheee
Confidence            345566664333  336678888889999999999999999999999 99999999999999999999999999877765


Q ss_pred             ecCCCCCCC-C-HHHHHHHhcChhHHHHHHHHHHHHHHHhhee-ccc-CCCcchhhHHHHHHhhhhHHHHHHHHHHHHHH
Q 019718          125 HAPQEHTPN-S-VQEIWALATQPDFLIYVAATVSVVLALVLHF-EPR-CGQTNILVYLGICSLMGSLTVVSIKAIGIAIK  200 (336)
Q Consensus       125 ~~~~~~~~~-t-~~el~~~~~~~~fl~y~~~~~~~~~~li~~~-~~~-~g~~~~~~y~~isgllgg~tvl~~K~v~~~l~  200 (336)
                      .....++.. + .+.+.-    .     +.+....++.-++-+ .++ -++.+...+.+--|++|.+-.. .....  + 
T Consensus       152 sD~~~~~~~~~~~~~i~G----D-----ll~l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~-iq~~i--l-  218 (334)
T PF06027_consen  152 SDVLSGSDSSSGSNPILG----D-----LLALLGAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISG-IQLAI--L-  218 (334)
T ss_pred             ecccccccCCCCCccchh----H-----HHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHH-HHHHh--e-
Confidence            432221110 1 111100    0     001111111111101 111 1122233344444444433211 11111  1 


Q ss_pred             HhhcCCccc-chhHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhhHHHHHHHHHHHHHHHHhcccCCCChhHHHHHH
Q 019718          201 LTLDGISQI-AYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEI  279 (336)
Q Consensus       201 ~~~~g~~~f-~~~~~y~ll~~~v~~~~~Q~~~Ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~  279 (336)
                      + .++...+ -+++...+++....+...=-...+-.++..+|+.+.--. ..-+.-+++.+..+|++.  .++    .+.
T Consensus       219 e-~~~i~~~~w~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsL-LTsd~~ali~~i~~f~~~--~~~----ly~  290 (334)
T PF06027_consen  219 E-RSGIESIHWTSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSL-LTSDFYALIIDIFFFGYK--FSW----LYI  290 (334)
T ss_pred             e-hhhhhccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHH-HHhhHHHHHHHHHhcCcc--ccH----HHH
Confidence            1 1111111 134444444444444333222345567777776544433 444555888899999984  333    366


Q ss_pred             HHHHHHHHhhhhhccccCCCCC
Q 019718          280 CGFITVLSGTIILHATREHEQT  301 (336)
Q Consensus       280 ~G~~~~i~GV~lLs~~~~~~~~  301 (336)
                      .|+++++.|+++....+++++.
T Consensus       291 ~af~lIiiG~vvy~~~~~~~~~  312 (334)
T PF06027_consen  291 LAFALIIIGFVVYNLAESPEEE  312 (334)
T ss_pred             HHHHHHHHHhheEEccCCcccc
Confidence            8888999999998876655443

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.70  E-value=9.4e-06  Score=77.40  Aligned_cols=260  Identities=14%  Similarity=0.071  Sum_probs=141.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhHHhhhccCC---Ccc--C--------CCccccchhhh----HHHHHHHHHHHHHH
Q 019718            5 ENSKGLILAVASSAFIGSSFILKKKGLKRAGASG---TRA--G--------VGGYTYLLEPL----WWAGMVTMIVGEVA   67 (336)
Q Consensus         5 ~~~iGv~LAl~sa~~~a~G~vlqk~~~~~~~~~~---~~~--~--------~~~~~~~~~p~----W~~G~~~~~~g~~~   67 (336)
                      +...|+.+.+++.++.+.+.+.-|.+..+.+...   .|-  +        ...+.-.+++.    ++.|.. +.....+
T Consensus         9 ~~~~~~~~~~la~~~~~~~~~~~K~~~~~~~~~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~   87 (293)
T PRK10532          9 PVWLPILLLLIAMASIQSGASLAKSLFPLVGAPGVTALRLALGTLILIAIFKPWRLRFAKEQRLPLLFYGVS-LGGMNYL   87 (293)
T ss_pred             ccchHHHHHHHHHHHHHhhHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhHHhccCCHHHHHHHHHHHHH-HHHHHHH
Confidence            3467889999999999999999998765433100   000  0        00001112222    355553 4566677


Q ss_pred             HHHHHhhcchhHhhhhhhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeEEEEecCCCCCCCCHHHHHHHhcChhH
Q 019718           68 NFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDF  147 (336)
Q Consensus        68 ~~~al~~ap~slV~Pl~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lvv~~~~~~~~~~t~~el~~~~~~~~f  147 (336)
                      .+.++...|.+...-+.....++. .++++    ||.+  ++.+..+..+|+.+++..+...+.......++        
T Consensus        88 ~~~al~~~~~~~a~~l~~t~Pi~~-~ll~~----~~~~--~~~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll--------  152 (293)
T PRK10532         88 FYLSIQTVPLGIAVALEFTGPLAV-ALFSS----RRPV--DFVWVVLAVLGLWFLLPLGQDVSHVDLTGAAL--------  152 (293)
T ss_pred             HHHHHhcccHHHHHHHHHHHHHHH-HHHhc----CChH--HHHHHHHHHHHHheeeecCCCcccCChHHHHH--------
Confidence            888899999998777777777777 66653    5544  45667777888776653222111110011111        


Q ss_pred             HHHHHHHHHHHHHHhhe-ecccCCCc-chhhHHHHHHhhhhHHHHHHHHHHHHHHHhhcCCcccchhHHHH-HHHHHHHH
Q 019718          148 LIYVAATVSVVLALVLH-FEPRCGQT-NILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWF-FLTVAAVC  224 (336)
Q Consensus       148 l~y~~~~~~~~~~li~~-~~~~~g~~-~~~~y~~isgllgg~tvl~~K~v~~~l~~~~~g~~~f~~~~~y~-ll~~~v~~  224 (336)
                           .....++.-.+. ..+|..++ .+... ....++++... ..  +.  .   ..+.....++..+. ++...+.+
T Consensus       153 -----~l~aa~~~a~~~v~~r~~~~~~~~~~~-~~~~~~~~~~l-~~--~~--~---~~~~~~~~~~~~~~~~l~lgv~~  218 (293)
T PRK10532        153 -----ALGAGACWAIYILSGQRAGAEHGPATV-AIGSLIAALIF-VP--IG--A---LQAGEALWHWSILPLGLAVAILS  218 (293)
T ss_pred             -----HHHHHHHHHHHHHHHHHHhccCCchHH-HHHHHHHHHHH-HH--HH--H---HccCcccCCHHHHHHHHHHHHHH
Confidence                 111111111111 11222111 11111 12222222111 10  11  0   11112223444443 24555666


Q ss_pred             HHHHHHHHHHhhccccccchhhhHHHHHHHHHHHHHHHHhcccCCCChhHHHHHHHHHHHHHHhhhhhccccCCCCC
Q 019718          225 VVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQT  301 (336)
Q Consensus       225 ~~~Q~~~Ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~~~i~GV~lLs~~~~~~~~  301 (336)
                      ++.+....|+++++.+++.+.+. ....|+++++.|.++++|..  ++.+    .+|.+++++|++..++.+.++++
T Consensus       219 t~~~~~l~~~~~~~~~a~~as~~-~~l~Pv~a~l~~~l~lgE~~--~~~~----~iG~~lIl~~~~~~~~~~~~~~~  288 (293)
T PRK10532        219 TALPYSLEMIALTRLPTRTFGTL-MSMEPALAAVSGMIFLGETL--TLIQ----WLALGAIIAASMGSTLTIRREPK  288 (293)
T ss_pred             HHHHHHHHHHHHHhcChhHHHHH-HHhHHHHHHHHHHHHhCCCC--cHHH----HHHHHHHHHHHHHHHhcCCCCCC
Confidence            77788888999999999876665 47788899999999999953  4543    45666777777777766555443

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.69  E-value=1.2e-05  Score=76.86  Aligned_cols=213  Identities=13%  Similarity=0.083  Sum_probs=110.6

Q ss_pred             HHHHHHHHHHHHHHhhc----chhHhhhhhhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeEEEEecCCCCCCCC
Q 019718           59 VTMIVGEVANFVAYVYA----PAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNS  134 (336)
Q Consensus        59 ~~~~~g~~~~~~al~~a----p~slV~Pl~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lvv~~~~~~~~~~t  134 (336)
                      +.+.....+.+.++.++    |.+...-+..+..+++ .+++++++|||++++++.|+++..+|+.++...++  +  .+
T Consensus        69 l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~-~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~--~--~~  143 (295)
T PRK11689         69 LLFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLT-ILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDN--G--LS  143 (295)
T ss_pred             HHHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHH-HHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCc--c--ch
Confidence            33334444555565543    5555566778889999 99999999999999999999999999877654221  1  01


Q ss_pred             HHHHHHHhcChhHHHHHHHHHHHHHHHhh-eecccCCC-cchhhHHHHHHhhhhHHHHHHHHHHHHHHHhhcCCcccchh
Q 019718          135 VQEIWALATQPDFLIYVAATVSVVLALVL-HFEPRCGQ-TNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYP  212 (336)
Q Consensus       135 ~~el~~~~~~~~fl~y~~~~~~~~~~li~-~~~~~~g~-~~~~~y~~isgllgg~tvl~~K~v~~~l~~~~~g~~~f~~~  212 (336)
                      .+++.....+. ...........++.-.+ ...+|..+ .++..+..   ..++.....    ....   .+....-.++
T Consensus       144 ~~~~~~~~~~~-~~G~~~~l~aa~~~A~~~v~~k~~~~~~~~~~~~~---~~~~~~l~~----~~~~---~~~~~~~~~~  212 (295)
T PRK11689        144 LAELINNIASN-PLSYGLAFIGAFIWAAYCNVTRKYARGKNGITLFF---ILTALALWI----KYFL---SPQPAMVFSL  212 (295)
T ss_pred             hhhhhhccccC-hHHHHHHHHHHHHHHHHHHHHhhccCCCCchhHHH---HHHHHHHHH----HHHH---hcCccccCCH
Confidence            11110000000 01111111111111111 11222221 12222211   111111110    0001   1111111233


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccccccchhhhHHHHHHHHHHHHHHHHhcccCCCChhHHHHHHHHHHHHHHhhhhh
Q 019718          213 QTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIIL  292 (336)
Q Consensus       213 ~~y~ll~~~v~~~~~Q~~~Ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~~~i~GV~lL  292 (336)
                      ..+..++....+...-..+.|+++|+.+++.+.+. .-..|+++++.|.++++|..  ++.    ...|.++++.|+++.
T Consensus       213 ~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~-~~l~Pv~a~i~~~~~lgE~~--~~~----~~iG~~lI~~gv~~~  285 (295)
T PRK11689        213 PAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATA-SYFTPVLSAALAALLLSTPL--SFS----FWQGVAMVTAGSLLC  285 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHH-HHhHHHHHHHHHHHHhCCCC--cHH----HHHHHHHHHHhHHHH
Confidence            33332222223344445567999999998866555 46788889999999999954  344    446777788887766


Q ss_pred             cc
Q 019718          293 HA  294 (336)
Q Consensus       293 s~  294 (336)
                      ..
T Consensus       286 ~~  287 (295)
T PRK11689        286 WL  287 (295)
T ss_pred             hh
Confidence            43

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.69  E-value=2e-06  Score=81.86  Aligned_cols=212  Identities=10%  Similarity=0.090  Sum_probs=122.1

Q ss_pred             HHHHHHHHHHHHHHHHH-hhcchhHhhhhhhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeEEEEecCCCCCCCC
Q 019718           56 AGMVTMIVGEVANFVAY-VYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNS  134 (336)
Q Consensus        56 ~G~~~~~~g~~~~~~al-~~ap~slV~Pl~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lvv~~~~~~~~~~t  134 (336)
                      .|......+..+...+. ...|.....-+..+..+++ .+++.+ +|||++++++.|..+..+|+.++..  +.+.+...
T Consensus        74 ~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~-~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~--~~~~~~~~  149 (292)
T PRK11272         74 IGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFT-LCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNS--GGNLSGNP  149 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHH-HHHHHH-hcccCchhHHHHHHHHHHhHHHHhc--Ccccccch
Confidence            45554455566777777 8888888899999999999 999975 7999999999999999999776532  11111111


Q ss_pred             HHHHHHHhcChhHHHHHHHHH-HHHHHHhheecccCCCcchhhHHHHHHhhhhHHHHHHHHHHHHHHHhhcCCcccchhH
Q 019718          135 VQEIWALATQPDFLIYVAATV-SVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQ  213 (336)
Q Consensus       135 ~~el~~~~~~~~fl~y~~~~~-~~~~~li~~~~~~~g~~~~~~y~~isgllgg~tvl~~K~v~~~l~~~~~g~~~f~~~~  213 (336)
                      ..+++.           .... ......  ...+|..+++........-..++.....   ... ..  ........++.
T Consensus       150 ~G~l~~-----------l~a~~~~a~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~--~~~~~~~~~~~  210 (292)
T PRK11272        150 WGAILI-----------LIASASWAFGS--VWSSRLPLPVGMMAGAAEMLAAGVVLLI---ASL-LS--GERLTALPTLS  210 (292)
T ss_pred             HHHHHH-----------HHHHHHHHHHH--HHHHhcCCCcchHHHHHHHHHHHHHHHH---HHH-Hc--CCcccccCCHH
Confidence            111111           1111 011111  1223332222211111111112111111   000 10  01111222334


Q ss_pred             HHH-HHHHHHHHHHHHHHHHHHhhccccccchhhhHHHHHHHHHHHHHHHHhcccCCCChhHHHHHHHHHHHHHHhhhhh
Q 019718          214 TWF-FLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIIL  292 (336)
Q Consensus       214 ~y~-ll~~~v~~~~~Q~~~Ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~~~i~GV~lL  292 (336)
                      .|. ++...+.+........+.++++.+++.+... ....|+.+.+.|.++++|.  .++.    ...|.++++.|++++
T Consensus       211 ~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~-~~l~Pi~a~i~~~~~l~E~--~t~~----~iiG~~lIi~gv~~~  283 (292)
T PRK11272        211 GFLALGYLAVFGSIIAISAYMYLLRNVRPALATSY-AYVNPVVAVLLGTGLGGET--LSPI----EWLALGVIVFAVVLV  283 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHH-HHHHHHHHHHHHHHHcCCC--CcHH----HHHHHHHHHHHHHHH
Confidence            443 3333444555666788899999888776655 5778889999999999995  3444    357778899999998


Q ss_pred             ccccC
Q 019718          293 HATRE  297 (336)
Q Consensus       293 s~~~~  297 (336)
                      +.++.
T Consensus       284 ~~~~~  288 (292)
T PRK11272        284 TLGKY  288 (292)
T ss_pred             HHHHh
Confidence            76544

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.60  E-value=2.3e-06  Score=81.63  Aligned_cols=227  Identities=15%  Similarity=0.146  Sum_probs=122.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhcchhHhhhhhhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeEEEEecCCCCCC
Q 019718           53 LWWAGMVTMIVGEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEHTP  132 (336)
Q Consensus        53 ~W~~G~~~~~~g~~~~~~al~~ap~slV~Pl~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lvv~~~~~~~~~  132 (336)
                      ....|+. ..+...++..++.+.+.+..+=+.+...+++ .+++.+++|||++++.+.|.+++++|+.+..   ..+.+.
T Consensus        68 ~~~~g~~-~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~-~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~---~~~~~~  142 (302)
T TIGR00817        68 LLPVAIV-HTIGHVTSNVSLSKVAVSFTHTIKAMEPFFS-VVLSAFFLGQEFPSTLWLSLLPIVGGVALAS---DTELSF  142 (302)
T ss_pred             HHHHHHH-HHHHHHHHHHHHHhccHHHHHHHHhcchHHH-HHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc---CCcccc
Confidence            3345555 4677789999999999999999999999999 9999999999999999999999999986532   222111


Q ss_pred             CCHHHHHHHhcChhHHHHHHHHHHHHHHHhh--eecc--cCCCcchhhHHHHHHhhh-hHHHHHHHHHHHHHHHhhcCCc
Q 019718          133 NSVQEIWALATQPDFLIYVAATVSVVLALVL--HFEP--RCGQTNILVYLGICSLMG-SLTVVSIKAIGIAIKLTLDGIS  207 (336)
Q Consensus       133 ~t~~el~~~~~~~~fl~y~~~~~~~~~~li~--~~~~--~~g~~~~~~y~~isgllg-g~tvl~~K~v~~~l~~~~~g~~  207 (336)
                      ....+++.          +.......+..++  +..+  +.+..+...|....|.+. ...............+..+...
T Consensus       143 ~~~G~~~~----------l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~  212 (302)
T TIGR00817       143 NWAGFLSA----------MISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAIS  212 (302)
T ss_pred             cHHHHHHH----------HHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhc
Confidence            11111111          0000001111110  1111  222223334433333211 1111111100000000000000


Q ss_pred             ccchhHHHH-HHHHHHHHHHHHHHHHHHhhccccccchhhhHHHHHHHHHHHHHHHHhcccCCCChhHHHHHHHHHHHHH
Q 019718          208 QIAYPQTWF-FLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVL  286 (336)
Q Consensus       208 ~f~~~~~y~-ll~~~v~~~~~Q~~~Ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~~~i  286 (336)
                      .......|. .+.....+.......-+.++++-+++...-. ....++++++.|.++++|.  .++.    -.+|.++++
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~-~~l~pv~~~~~~~~~lge~--lt~~----~~~G~~lil  285 (302)
T TIGR00817       213 GVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVG-NCMKRVVVIVVSILFFGTK--ISPQ----QVFGTGIAI  285 (302)
T ss_pred             ccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHH-hhhhhhheeeeehhhcCCC--Cchh----HHHHHHHHH
Confidence            001111232 2222222322222233357888877664444 6777888999999999995  3444    346777889


Q ss_pred             HhhhhhccccCCCCC
Q 019718          287 SGTIILHATREHEQT  301 (336)
Q Consensus       287 ~GV~lLs~~~~~~~~  301 (336)
                      .|+++-++.|.++++
T Consensus       286 ~Gv~l~~~~k~~~~~  300 (302)
T TIGR00817       286 AGVFLYSRVKAQKPK  300 (302)
T ss_pred             HHHHHHHHHhccCcC
Confidence            999998877654433

specificities overlap.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.49  E-value=7.6e-07  Score=73.60  Aligned_cols=99  Identities=15%  Similarity=0.182  Sum_probs=77.8

Q ss_pred             HHHHHHHHHHHHHHHhHHhhhccCCCccCCCccccchhhhHHHHH--HHHHHHHHHHHHHHhhcchhHhhhhhhhHHHHH
Q 019718           14 VASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGM--VTMIVGEVANFVAYVYAPAVLVTPLGALSIIIR   91 (336)
Q Consensus        14 l~sa~~~a~G~vlqk~~~~~~~~~~~~~~~~~~~~~~~p~W~~G~--~~~~~g~~~~~~al~~ap~slV~Pl~a~~lv~~   91 (336)
                      +.|.++-..|.+..|++.+..+..       .  ..+++.++.+.  ..+.++..+...++...|++...|+.+++.+++
T Consensus         7 ~~ai~~ev~g~~~lK~s~~~~~~~-------~--~~~~~l~~~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~   77 (111)
T PRK15051          7 VFASLLSVAGQLCQKQATRPVAIG-------K--RRKHIVLWLGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWV   77 (111)
T ss_pred             HHHHHHHHHHHHHHHHHhccCCcc-------h--hhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHH
Confidence            445566667888888874433210       0  11234445555  557888999999999999999999999999999


Q ss_pred             HHHHHHHHhcccccccchhhHHHhhcceeEE
Q 019718           92 YAVLAHFMLKERLQKMGILGCITCIVGSVVI  122 (336)
Q Consensus        92 ~~~la~~~l~e~~~~~~~~G~~li~~G~~lv  122 (336)
                       .+++.+++|||++.+++.|+.++++|++++
T Consensus        78 -~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i  107 (111)
T PRK15051         78 -TLAAVKLWHEPVSPRHWCGVAFIIGGIVIL  107 (111)
T ss_pred             -HHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence             999999999999999999999999997654

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.46  E-value=4.1e-05  Score=70.82  Aligned_cols=212  Identities=16%  Similarity=0.223  Sum_probs=121.9

Q ss_pred             HHHHHHHHHHHHHHHHHhhcchhHhhhhhhhHHHHHHHHHHH-HHhcccccccchhhHHHhhcceeEEEEecCCCCCCCC
Q 019718           56 AGMVTMIVGEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAH-FMLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNS  134 (336)
Q Consensus        56 ~G~~~~~~g~~~~~~al~~ap~slV~Pl~a~~lv~~~~~la~-~~l~e~~~~~~~~G~~li~~G~~lvv~~~~~~~~~~t  134 (336)
                      .|......+..+.+.++...|.+..+++.....+++ .+++. +++|||++++++.|..+...|+.++...+..+.....
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~-~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~  153 (292)
T COG0697          75 LALLGLALPFLLLFLALKYTSASVASLIIGLLPLFT-ALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSL  153 (292)
T ss_pred             HHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHH-HHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHH
Confidence            444556677789999999999999999999999999 99998 7779999999999999999998776443332221100


Q ss_pred             HHHHHHHhcChhHHHHHHHHHHHHHHHhheecccCCCcchhhHHHHHHhhhhHHHHHHHHHHHHHHHhhcCCcccchhHH
Q 019718          135 VQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQT  214 (336)
Q Consensus       135 ~~el~~~~~~~~fl~y~~~~~~~~~~li~~~~~~~g~~~~~~y~~isgllgg~tvl~~K~v~~~l~~~~~g~~~f~~~~~  214 (336)
                      ..++           +...... ...+.....++..+.+.......      ......-....  .......+....+..
T Consensus       154 ~g~~-----------~~l~a~~-~~a~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~--~~~~~~~~~~~~~~~  213 (292)
T COG0697         154 LGLL-----------LALAAAL-LWALYTALVKRLSRLGPVTLALL------LQLLLALLLLL--LFFLSGFGAPILSRA  213 (292)
T ss_pred             HHHH-----------HHHHHHH-HHHHHHHHHHHhcCCChHHHHHH------HHHHHHHHHHH--HHHhccccccCCHHH
Confidence            1111           1111111 11110111121111111111110      00000000000  000111112222333


Q ss_pred             HH-HHHHHHHHHHHHHHHHHHhhccccccchhhhHHHHHHHHHHHHHHHHhcccCCCChhHHHHHHHHHHHHHHhhhhhc
Q 019718          215 WF-FLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILH  293 (336)
Q Consensus       215 y~-ll~~~v~~~~~Q~~~Ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~~~i~GV~lLs  293 (336)
                      |. +....+.+...-....+++++..++..+.|.. ...++.+++.+.++++|.-  +..++    .|.++++.|+++..
T Consensus       214 ~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~l~~~e~~--~~~~~----~G~~li~~g~~l~~  286 (292)
T COG0697         214 WLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLS-LLEPVFAALLGVLLLGEPL--SPAQL----LGAALVVLGVLLAS  286 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHH-HHHHHHHHHHHHHHhCCCC--cHHHH----HHHHHHHHHHHHHh
Confidence            32 33333333435667788999999998877776 6777778889999999954  34433    45578888888877


Q ss_pred             cc
Q 019718          294 AT  295 (336)
Q Consensus       294 ~~  295 (336)
                      .+
T Consensus       287 ~~  288 (292)
T COG0697         287 LR  288 (292)
T ss_pred             cc
Confidence            66

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=98.42  E-value=4.1e-07  Score=75.39  Aligned_cols=101  Identities=18%  Similarity=0.197  Sum_probs=79.5

Q ss_pred             HHHHHHHHhHHhhhccCCCc--cCCCccccchhhhHHHHHHHHHHHHHHHHHHHhhcchhHhhhhh-hhHHHHHHHHHHH
Q 019718           21 GSSFILKKKGLKRAGASGTR--AGVGGYTYLLEPLWWAGMVTMIVGEVANFVAYVYAPAVLVTPLG-ALSIIIRYAVLAH   97 (336)
Q Consensus        21 a~G~vlqk~~~~~~~~~~~~--~~~~~~~~~~~p~W~~G~~~~~~g~~~~~~al~~ap~slV~Pl~-a~~lv~~~~~la~   97 (336)
                      +...-+-||+.+..++....  .-.+.+..++||+.++++++...|++..+..++-+|+|+..|+. +++++++ ++.++
T Consensus         9 G~Tnpfik~g~~~~~~~~~~~~~~~~~~~Ll~n~~y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT-~l~g~   87 (113)
T PF10639_consen    9 GCTNPFIKRGSSGLEKVKASLQLLQEIKFLLLNPKYIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFT-ALTGW   87 (113)
T ss_pred             cCchHHHHHHHhhcCCccchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHH-HHHHH
Confidence            33445677765544332111  11234578999999999999999999999999999999999995 9999999 99886


Q ss_pred             HHhcccccccchhhHHHhhcceeEE
Q 019718           98 FMLKERLQKMGILGCITCIVGSVVI  122 (336)
Q Consensus        98 ~~l~e~~~~~~~~G~~li~~G~~lv  122 (336)
                      ++-+|..+++.+.|+.+++.|+.+.
T Consensus        88 ~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   88 LLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HhcCcccchhHHHHHHHHHcCeeee
Confidence            6666666777899999999998765

Many members are annotated as potential transmembrane proteins.

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.41  E-value=1.8e-06  Score=72.73  Aligned_cols=112  Identities=24%  Similarity=0.345  Sum_probs=83.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhHHhhhccCC---Ccc--------------CC-CccccchhhhHH----HHHHHHHHHHHH
Q 019718           10 LILAVASSAFIGSSFILKKKGLKRAGASG---TRA--------------GV-GGYTYLLEPLWW----AGMVTMIVGEVA   67 (336)
Q Consensus        10 v~LAl~sa~~~a~G~vlqk~~~~~~~~~~---~~~--------------~~-~~~~~~~~p~W~----~G~~~~~~g~~~   67 (336)
                      .+.|+.||++.++..++-|-+.+..+..-   .|.              |. +...-...+.|.    .| +.-.++-.+
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSG-la~glswl~   83 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSG-LAGGLSWLL   83 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHH-HHHHHHHHH
Confidence            46788899999999999888866433210   000              00 000112233332    33 445577778


Q ss_pred             HHHHHhhcchhHhhhhhhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeEEE
Q 019718           68 NFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIV  123 (336)
Q Consensus        68 ~~~al~~ap~slV~Pl~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lvv  123 (336)
                      .+-|+.-++.+.|.|+-..+.++. .+++..+||||++..+|+|+.++++|++++.
T Consensus        84 Yf~ALk~G~as~VvPldk~svvl~-~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          84 YFRALKKGKASRVVPLDKTSVVLA-VLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHhcCCcceEEEcccccHHHH-HHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            999999999999999999999999 9999999999999999999999999988764

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.29  E-value=2.1e-06  Score=70.57  Aligned_cols=66  Identities=32%  Similarity=0.474  Sum_probs=59.0

Q ss_pred             HHHHHHHHHHHHHHHHhhcchhHhhhhhhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeEEEE
Q 019718           57 GMVTMIVGEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVI  124 (336)
Q Consensus        57 G~~~~~~g~~~~~~al~~ap~slV~Pl~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lvv~  124 (336)
                      |......+..+.+.|+.++| ..+.|+.+++.+++ .+++.+++|||+++++|.|++++.+|++++..
T Consensus        41 g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~-~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~  106 (113)
T PF13536_consen   41 GLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFT-ALLSWLFFKERLSPRRWLAILLILIGVILIAW  106 (113)
T ss_pred             HHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHH-HHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh
Confidence            44445577889999999999 59999999999999 99999999999999999999999999877654

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=98.13  E-value=0.0006  Score=65.34  Aligned_cols=222  Identities=14%  Similarity=0.184  Sum_probs=128.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcchhHhhhhhhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeEEEEecCCCCC
Q 019718           52 PLWWAGMVTMIVGEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEHT  131 (336)
Q Consensus        52 p~W~~G~~~~~~g~~~~~~al~~ap~slV~Pl~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lvv~~~~~~~~  131 (336)
                      +.+..+ .+..++..++-.|+.+.|...-+=+-+..++++ ++++.+++|+|.+++++.+++++++|+++......++++
T Consensus        66 ~~~~~~-~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~v-mi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~  143 (303)
T PF08449_consen   66 KYAILS-FLFFLASVLSNAALKYISYPTQIVFKSSKPIPV-MILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSS  143 (303)
T ss_pred             HHHHHH-HHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHH-HHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccc
Confidence            334444 455578889999999999999999999999999 999999999999999999999999999888776554443


Q ss_pred             CCCHHHHHHHhcChhHHHHHHHHHHHHHH-H--hh--eecccCCCc--chhhHHHHHHhhh-hHHHHHHHHHHHHHHHhh
Q 019718          132 PNSVQEIWALATQPDFLIYVAATVSVVLA-L--VL--HFEPRCGQT--NILVYLGICSLMG-SLTVVSIKAIGIAIKLTL  203 (336)
Q Consensus       132 ~~t~~el~~~~~~~~fl~y~~~~~~~~~~-l--i~--~~~~~~g~~--~~~~y~~isgllg-g~tvl~~K~v~~~l~~~~  203 (336)
                      ..+.++..     +.. .++.+....++- .  .+  +..++++..  ..+.|--.-++.. .......+ -.+ .....
T Consensus       144 ~~~~~~~~-----~~~-G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~-~~~-~~~~~  215 (303)
T PF08449_consen  144 SSNSSSFS-----SAL-GIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLP-TGE-FRSAI  215 (303)
T ss_pred             cccccccc-----chh-HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHH-hhH-hhHHH
Confidence            32221100     000 111111111110 0  11  111233322  2334433333222 11122211 111 11000


Q ss_pred             cCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhhHHHHHHHHHHHHHHHHhcccCCCChhHHHHHHHHHH
Q 019718          204 DGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFI  283 (336)
Q Consensus       204 ~g~~~f~~~~~y~ll~~~v~~~~~Q~~~Ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~  283 (336)
                        +-...||..+..++....+...-+.+.+.-.+++++....=+. ..=-..+++.+.++|++  +.++.+|.+.    +
T Consensus       216 --~f~~~~p~~~~~l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~-t~Rk~~sillS~~~f~~--~~~~~~~~G~----~  286 (303)
T PF08449_consen  216 --RFISAHPSVLLYLLLFSLTGALGQFFIFYLIKKFSALTTTIVT-TLRKFLSILLSVIIFGH--PLSPLQWIGI----V  286 (303)
T ss_pred             --HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHH-HHHHHHHHHHHHHhcCC--cCChHHHHHH----H
Confidence              0123677776665555555444455666777888876654444 44466788889999987  5667776544    4


Q ss_pred             HHHHhhhhh
Q 019718          284 TVLSGTIIL  292 (336)
Q Consensus       284 ~~i~GV~lL  292 (336)
                      +++.|+.+=
T Consensus       287 lv~~g~~~~  295 (303)
T PF08449_consen  287 LVFAGIFLY  295 (303)
T ss_pred             HhHHHHHHH
Confidence            455565543

; GO: 0055085 transmembrane transport

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.11  E-value=0.00015  Score=68.85  Aligned_cols=213  Identities=10%  Similarity=0.211  Sum_probs=125.5

Q ss_pred             hhHHHHHHH---HHHHHHHHHHHHhhcchhHhhhhh-hhHHHHHHHHHHHHHhcccccccchh----hHHHhhcceeEEE
Q 019718           52 PLWWAGMVT---MIVGEVANFVAYVYAPAVLVTPLG-ALSIIIRYAVLAHFMLKERLQKMGIL----GCITCIVGSVVIV  123 (336)
Q Consensus        52 p~W~~G~~~---~~~g~~~~~~al~~ap~slV~Pl~-a~~lv~~~~~la~~~l~e~~~~~~~~----G~~li~~G~~lvv  123 (336)
                      ..|+.+++.   -.+|+++|+.++.....|.-.|++ +.+++.| .+.+.++++|--+..+++    +.+++++|+.+..
T Consensus        43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~-sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts  121 (269)
T PF06800_consen   43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGT-SLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTS  121 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHH-HHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhc
Confidence            567777754   569999999999999999999998 8999999 999999999988877764    8889999987765


Q ss_pred             EecCCCCCCCCHHHHHHHhcChhHHHHHHHHHHHHHHHhheecccCCCcchhhHHHHHHhhhhHHHHHHHHHHHHHHHh-
Q 019718          124 IHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLT-  202 (336)
Q Consensus       124 ~~~~~~~~~~t~~el~~~~~~~~fl~y~~~~~~~~~~li~~~~~~~g~~~~~~y~~isgllgg~tvl~~K~v~~~l~~~-  202 (336)
                      ....++++..+..+..+     ..+ +..+  ..+.+..|..-||..+-+            +.+.++-.+++..+... 
T Consensus       122 ~~~~~~~~~~~~~~~~k-----gi~-~Ll~--stigy~~Y~~~~~~~~~~------------~~~~~lPqaiGm~i~a~i  181 (269)
T PF06800_consen  122 YQDKKSDKSSSKSNMKK-----GIL-ALLI--STIGYWIYSVIPKAFHVS------------GWSAFLPQAIGMLIGAFI  181 (269)
T ss_pred             cccccccccccccchhh-----HHH-HHHH--HHHHHHHHHHHHHhcCCC------------hhHhHHHHHHHHHHHHHH
Confidence            54444443222222222     111 1111  122333344446553332            22222223322221110 


Q ss_pred             ---hcCCcccchhHHHHHHHHHHHHHHHH-HHHHHHhhccccccchhhhHHHHHHHHHHHHHHHHhcccCCCChhHHHHH
Q 019718          203 ---LDGISQIAYPQTWFFLTVAAVCVVTQ-LNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASE  278 (336)
Q Consensus       203 ---~~g~~~f~~~~~y~ll~~~v~~~~~Q-~~~Ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~  278 (336)
                         .. .+.+.+..+|.=++..+.=.+.= .+++...  .--...-.|+-|.. .+.+.++|+.+++|..  +..++...
T Consensus       182 ~~~~~-~~~~~~k~~~~nil~G~~w~ignl~~~is~~--~~G~a~af~lSQ~~-vvIStlgGI~il~E~K--t~ke~~~~  255 (269)
T PF06800_consen  182 FNLFS-KKPFFEKKSWKNILTGLIWGIGNLFYLISAQ--KNGVATAFTLSQLG-VVISTLGGIFILKEKK--TKKEMIYT  255 (269)
T ss_pred             Hhhcc-cccccccchHHhhHHHHHHHHHHHHHHHhHH--hccchhhhhHHhHH-HHHHHhhhheEEEecC--chhhHHHH
Confidence               01 22223333333222222111110 1122221  22223456676666 5568889999999976  46889999


Q ss_pred             HHHHHHHHHhhhh
Q 019718          279 ICGFITVLSGTII  291 (336)
Q Consensus       279 ~~G~~~~i~GV~l  291 (336)
                      .+|+++++.|.++
T Consensus       256 ~~G~~Liv~G~il  268 (269)
T PF06800_consen  256 LIGLILIVIGAIL  268 (269)
T ss_pred             HHHHHHHHHhhhc
Confidence            9999999988775

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.03  E-value=0.0004  Score=68.19  Aligned_cols=70  Identities=14%  Similarity=0.190  Sum_probs=59.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcchhHhhhhhhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeEEE
Q 019718           52 PLWWAGMVTMIVGEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIV  123 (336)
Q Consensus        52 p~W~~G~~~~~~g~~~~~~al~~ap~slV~Pl~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lvv  123 (336)
                      +....|+.-.. +..+...++.+.+.+..+=+-+.+.+++ ++++++++|||++++.+.+++++++|+.+..
T Consensus       116 ~llp~gl~~~~-~~~~~~~sl~~~svs~~~iika~~Pvft-~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~  185 (350)
T PTZ00343        116 NFLPQGLCHLF-VHFGAVISMGLGAVSFTHVVKAAEPVFT-ALLSILFLKQFLNLYAYLSLIPIVGGVALAS  185 (350)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHhhccHHHHHHHHHhhHHHH-HHHHHHHhCCCccHHHHHHHHHHHHHHHhee
Confidence            34444544432 3556669999999999999999999999 9999999999999999999999999988764

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.98  E-value=0.00019  Score=70.42  Aligned_cols=287  Identities=11%  Similarity=0.077  Sum_probs=153.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhHHhhhccC-------------CC----ccC-CCccccch---hhhHHHHHH---H
Q 019718            5 ENSKGLILAVASSAFIGSSFILKKKGLKRAGAS-------------GT----RAG-VGGYTYLL---EPLWWAGMV---T   60 (336)
Q Consensus         5 ~~~iGv~LAl~sa~~~a~G~vlqk~~~~~~~~~-------------~~----~~~-~~~~~~~~---~p~W~~G~~---~   60 (336)
                      +..+|++..+++.++.+.=.+=||| .++=+-+             .+    ..+ .+..++++   ...|..+++   +
T Consensus         4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~w~wE~~W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G~~   82 (345)
T PRK13499          4 AIILGIIWHLIGGASSGSFYAPFKK-VKKWSWETMWSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFGAL   82 (345)
T ss_pred             hhHHHHHHHHHHHHHhhcccccccc-cCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHHHH
Confidence            6778999999999999988999998 3221100             00    000 01122222   345666653   3


Q ss_pred             HHHHHHHHHHHHhhcchhHhhhhh-hhHHHHHHHHHHHHHhcccc---cc----cchhhHHHhhcceeEEEEecCCCCCC
Q 019718           61 MIVGEVANFVAYVYAPAVLVTPLG-ALSIIIRYAVLAHFMLKERL---QK----MGILGCITCIVGSVVIVIHAPQEHTP  132 (336)
Q Consensus        61 ~~~g~~~~~~al~~ap~slV~Pl~-a~~lv~~~~~la~~~l~e~~---~~----~~~~G~~li~~G~~lvv~~~~~~~~~  132 (336)
                      -.+|++.++.+..+...|+-.|++ +++++.+ .++..++++|=-   +.    ....|++++++|+++....+...++.
T Consensus        83 W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~g-tL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~~~  161 (345)
T PRK13499         83 WGIGGITYGLTMRYLGMSLGIGIAIGITLIVG-TLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKERK  161 (345)
T ss_pred             HHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHH-HHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhcccc
Confidence            558999999999999999999997 5788888 999999998633   32    24579999999988776544333332


Q ss_pred             CCHHHHHHHhcChhHHHHHHHHHHHHHHHhh--e---ecc----cCCCcch-hhHHHHHH-hhhhHHHHHHHHHHHHHH-
Q 019718          133 NSVQEIWALATQPDFLIYVAATVSVVLALVL--H---FEP----RCGQTNI-LVYLGICS-LMGSLTVVSIKAIGIAIK-  200 (336)
Q Consensus       133 ~t~~el~~~~~~~~fl~y~~~~~~~~~~li~--~---~~~----~~g~~~~-~~y~~isg-llgg~tvl~~K~v~~~l~-  200 (336)
                      .+.||-.+.-.+.. +....+..+......+  -   .-+    ..|.... ......++ ++|++..-+.=+.-.+-+ 
T Consensus       162 ~~~~~~~~~~~~KG-i~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~  240 (345)
T PRK13499        162 MGIKKAEEFNLKKG-LILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKN  240 (345)
T ss_pred             cccccccccchHhH-HHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence            22110000000111 2222222221111100  0   001    1121111 11112222 233332221111100001 


Q ss_pred             HhhcCCcccch-----hHHHHHHHHHHHHHHHHHHHHHHhhc-ccc--ccchhhhHHHHHHHHHHHHHHHHhcccCCCCh
Q 019718          201 LTLDGISQIAY-----PQTWFFLTVAAVCVVTQLNYLNKALD-TFN--AAIVSPVYYVMFTTLTIIASAIMFKDWSGQDV  272 (336)
Q Consensus       201 ~~~~g~~~f~~-----~~~y~ll~~~v~~~~~Q~~~Ln~aL~-~~~--~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~  272 (336)
                      +..+....+..     +..|++....-+.=..|..+.--+-+ ...  +....++.+-...+.+.+.|+ +++|++..+.
T Consensus       241 ~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~  319 (345)
T PRK13499        241 KDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASR  319 (345)
T ss_pred             CCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCc
Confidence            01100111222     34455444444444445333332222 111  122345555556677888888 5999999999


Q ss_pred             hHHHHHHHHHHHHHHhhhhhccc
Q 019718          273 SGIASEICGFITVLSGTIILHAT  295 (336)
Q Consensus       273 ~~~~~~~~G~~~~i~GV~lLs~~  295 (336)
                      .+.....+|+++++.|.+++.-.
T Consensus       320 k~~~~l~~G~vliI~g~~lig~~  342 (345)
T PRK13499        320 RPVRVLSLGCVVIILAANIVGLG  342 (345)
T ss_pred             cchhHHHHHHHHHHHHHHHHhhc
Confidence            99999999999999999988754

>TIGR00688 rarD rarD protein

Probab=97.96  E-value=0.00098  Score=61.96  Aligned_cols=62  Identities=15%  Similarity=0.157  Sum_probs=56.8

Q ss_pred             HHHHHHHHHHHHhhcchhHhhhhhhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeEEE
Q 019718           61 MIVGEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIV  123 (336)
Q Consensus        61 ~~~g~~~~~~al~~ap~slV~Pl~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lvv  123 (336)
                      +..+..+.+.|+...|.+..+-+....-+++ .+++++++|||+++++|.|+.+..+|++++.
T Consensus        80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~-~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVM-VALGRVFLKERISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             HHHHHHHHHHHHHcchHHHHHHHHHHHHHHH-HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence            5567789999999999999999999999999 9999999999999999999999999987653

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=97.92  E-value=3.6e-05  Score=73.40  Aligned_cols=125  Identities=15%  Similarity=0.101  Sum_probs=92.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhHHhhhccCCC---c-----------cCCCccccchhh----hHHHHHHHHHHHHHH
Q 019718            6 NSKGLILAVASSAFIGSSFILKKKGLKRAGASGT---R-----------AGVGGYTYLLEP----LWWAGMVTMIVGEVA   67 (336)
Q Consensus         6 ~~iGv~LAl~sa~~~a~G~vlqk~~~~~~~~~~~---~-----------~~~~~~~~~~~p----~W~~G~~~~~~g~~~   67 (336)
                      ..+|..+++.++++.+...++.||..++.+....   .           ............    .++.|+...++++.+
T Consensus       146 ~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~lgv~~t~~~~~l  225 (293)
T PRK10532        146 DLTGAALALGAGACWAIYILSGQRAGAEHGPATVAIGSLIAALIFVPIGALQAGEALWHWSILPLGLAVAILSTALPYSL  225 (293)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHccCcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence            3579999999999999999998886433221000   0           000000011111    246777777888889


Q ss_pred             HHHHHhhcchhHhhhhhhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeEEEEecCCCCC
Q 019718           68 NFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEHT  131 (336)
Q Consensus        68 ~~~al~~ap~slV~Pl~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lvv~~~~~~~~  131 (336)
                      +..++...|.+.++++..+..+++ .+++.+++||+++..+++|.++++.|+.......+++++
T Consensus       226 ~~~~~~~~~a~~as~~~~l~Pv~a-~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~~~~  288 (293)
T PRK10532        226 EMIALTRLPTRTFGTLMSMEPALA-AVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRREPK  288 (293)
T ss_pred             HHHHHHhcChhHHHHHHHhHHHHH-HHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence            999999999999999999999999 999999999999999999999999998766444444433

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=97.63  E-value=0.00051  Score=63.41  Aligned_cols=114  Identities=18%  Similarity=0.222  Sum_probs=85.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhHHhhhccCC---Cc--c------------CCCccccchhhhH----HHHHHHHHH
Q 019718            5 ENSKGLILAVASSAFIGSSFILKKKGLKRAGASG---TR--A------------GVGGYTYLLEPLW----WAGMVTMIV   63 (336)
Q Consensus         5 ~~~iGv~LAl~sa~~~a~G~vlqk~~~~~~~~~~---~~--~------------~~~~~~~~~~p~W----~~G~~~~~~   63 (336)
                      ....|..+++.++++.+...+++||..++.+...   .+  .            ..+.......+.|    +.|....++
T Consensus       125 ~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (260)
T TIGR00950       125 INPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQALSLQWGALLYLGLIGTAL  204 (260)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHH
Confidence            3467999999999999999999999754432100   00  0            0000111122233    244444567


Q ss_pred             HHHHHHHHHhhcchhHhhhhhhhHHHHHHHHHHHHHhcccccccchhhHHHhhcce
Q 019718           64 GEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGS  119 (336)
Q Consensus        64 g~~~~~~al~~ap~slV~Pl~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~  119 (336)
                      +..+++.++...|.+.+..+..+..+++ .+++.+++||+++..++.|+.+++.|+
T Consensus       205 ~~~~~~~a~~~~~~~~~s~~~~~~pv~~-~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       205 AYFLWNKGLTLVDPSAASILALAEPLVA-LLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHhcCCchHHHHHHHHHHHHH-HHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            8889999999999999999999999999 999999999999999999999999885

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.62  E-value=0.00035  Score=58.67  Aligned_cols=73  Identities=18%  Similarity=0.198  Sum_probs=64.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcchhHhhhh-hhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeEEEEecC
Q 019718           54 WWAGMVTMIVGEVANFVAYVYAPAVLVTPL-GALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAP  127 (336)
Q Consensus        54 W~~G~~~~~~g~~~~~~al~~ap~slV~Pl-~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lvv~~~~  127 (336)
                      |+..+.++++++.+...++...|+++.-|+ .+++.+.+ .+.+.+++||+++..++.|+.++++|++++-..++
T Consensus        33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~-~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~  106 (120)
T PRK10452         33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFI-TLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTR  106 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHH-HHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCC
Confidence            456667788899999999999999999999 57999999 99999999999999999999999999877754444

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.60  E-value=0.00035  Score=57.73  Aligned_cols=76  Identities=14%  Similarity=0.186  Sum_probs=64.6

Q ss_pred             hhhhHHH-HHHHHHHHHHHHHHHHhhcchhHhhhh-hhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeEEEEec
Q 019718           50 LEPLWWA-GMVTMIVGEVANFVAYVYAPAVLVTPL-GALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHA  126 (336)
Q Consensus        50 ~~p~W~~-G~~~~~~g~~~~~~al~~ap~slV~Pl-~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lvv~~~  126 (336)
                      ++|.|.+ .+.++++++.+...|+...|.++.-|+ .+++.+.+ .+.+.+++||+++..++.|..+++.|++++-..+
T Consensus        28 ~~~~~~i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~-~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         28 TRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLI-SLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHH-HHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            3555544 445577888888899999999999999 77999999 9999999999999999999999999988774443

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=97.49  E-value=0.00042  Score=65.39  Aligned_cols=270  Identities=18%  Similarity=0.255  Sum_probs=137.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhHHhhhccC--CCccCC------Cccccchhh--------hHH--HHHHHHHHHHHH
Q 019718            6 NSKGLILAVASSAFIGSSFILKKKGLKRAGAS--GTRAGV------GGYTYLLEP--------LWW--AGMVTMIVGEVA   67 (336)
Q Consensus         6 ~~iGv~LAl~sa~~~a~G~vlqk~~~~~~~~~--~~~~~~------~~~~~~~~p--------~W~--~G~~~~~~g~~~   67 (336)
                      ..+|+.+..+| .+.+...++-+|...-.+..  ..|--.      .-.-|.+.|        .|+  -|+.-. .|..+
T Consensus        36 p~~gl~l~~vs-~ff~~~~vv~t~~~e~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R~~LiLRg~mG~-tgvml  113 (346)
T KOG4510|consen   36 PNLGLLLLTVS-YFFNSCMVVSTKVLENDPMELASFRLLVRMLITYPCLIYYMQPVIGPEGKRKWLILRGFMGF-TGVML  113 (346)
T ss_pred             CccCceehhhH-HHHhhHHHhhhhhhccChhHhhhhhhhhehhhhheEEEEEeeeeecCCCcEEEEEeehhhhh-hHHHH
Confidence            34688888888 77777777777754433321  011000      001122222        121  122111 34446


Q ss_pred             HHHHHhhcchhHhhhhhhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeEEE----EecCCCCCCCCHHHHHHHhc
Q 019718           68 NFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIV----IHAPQEHTPNSVQEIWALAT  143 (336)
Q Consensus        68 ~~~al~~ap~slV~Pl~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lvv----~~~~~~~~~~t~~el~~~~~  143 (336)
                      ...||.+.|++=-.-+.-.+-+++ .++|+.+||||.++.|.+|+.....|+++++    +||..++...+.+ .  -+.
T Consensus       114 myya~~~mslaDA~vItFssPvft-~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~-~--~~~  189 (346)
T KOG4510|consen  114 MYYALMYMSLADAVVITFSSPVFT-IIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQ-V--EYD  189 (346)
T ss_pred             HHHHHhhcchhheEEEEecChHHH-HHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCcccccccc-c--ccc
Confidence            667777777665555667788899 9999999999999999999999999999884    4555433322222 1  112


Q ss_pred             ChhHHHHH-HHHHHHHHHHh-heecccCCCcchhhHHHHHHhhhhHHHHHHHHHHHHHHHhhcCCcc-cchhHHHHHHHH
Q 019718          144 QPDFLIYV-AATVSVVLALV-LHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQ-IAYPQTWFFLTV  220 (336)
Q Consensus       144 ~~~fl~y~-~~~~~~~~~li-~~~~~~~g~~~~~~y~~isgllgg~tvl~~K~v~~~l~~~~~g~~~-f~~~~~y~ll~~  220 (336)
                      .|....-+ .++.....+.+ .+..++-+.---+-|-+.-+++.++-.+          ..+ |.-| -..+.=|.+++.
T Consensus       190 ~~gt~aai~s~lf~asvyIilR~iGk~~h~~msvsyf~~i~lV~s~I~~----------~~i-g~~~lP~cgkdr~l~~~  258 (346)
T KOG4510|consen  190 IPGTVAAISSVLFGASVYIILRYIGKNAHAIMSVSYFSLITLVVSLIGC----------ASI-GAVQLPHCGKDRWLFVN  258 (346)
T ss_pred             CCchHHHHHhHhhhhhHHHHHHHhhccccEEEEehHHHHHHHHHHHHHH----------hhc-cceecCccccceEEEEE
Confidence            23322111 11111111111 1222221110011222221211111000          011 1111 112222333333


Q ss_pred             HHHHHHHHHHHHHHhhccccccchhhhHHHHHHHHHHHHHHHHhcccCCCChhHHHHHHHHHHHHHHhhhhhccccCCC
Q 019718          221 AAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHE  299 (336)
Q Consensus       221 ~v~~~~~Q~~~Ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~~~i~GV~lLs~~~~~~  299 (336)
                      +-+..+..+.++.+++|+=.+-. +.++.+...+.+.+.-+++|+|+-+  .|.|.    |.+.++..++..+.+|-.+
T Consensus       259 lGvfgfigQIllTm~lQiErAGp-vaim~~~dvvfAf~wqv~ff~~~Pt--~ws~~----Ga~~vvsS~v~~a~~kwa~  330 (346)
T KOG4510|consen  259 LGVFGFIGQILLTMGLQIERAGP-VAIMTYTDVVFAFFWQVLFFGHWPT--IWSWV----GAVMVVSSTVWVALKKWAG  330 (346)
T ss_pred             ehhhhhHHHHHHHHHhhhhccCC-eehhhHHHHHHHHHHHHHHhcCCCh--HHHhh----ceeeeehhHHHHHHHHHhc
Confidence            33344445568999998644433 4567788888999999999999853  55553    4333444444444444433

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=97.44  E-value=0.00043  Score=68.41  Aligned_cols=117  Identities=20%  Similarity=0.168  Sum_probs=83.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhHHhhhccCCCcc-------------------CCCccccc--hhhhHHHHHHH----
Q 019718            6 NSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRA-------------------GVGGYTYL--LEPLWWAGMVT----   60 (336)
Q Consensus         6 ~~iGv~LAl~sa~~~a~G~vlqk~~~~~~~~~~~~~-------------------~~~~~~~~--~~p~W~~G~~~----   60 (336)
                      +.+|..+++.|+++.++..++|||..++-+......                   +.......  .++ ++..++.    
T Consensus       187 ~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~i~y~~i~  265 (358)
T PLN00411        187 WLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDI-TLITIVTMAII  265 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccch-HHHHHHHHHHH
Confidence            577999999999999999999998655432210000                   00000000  011 1111221    


Q ss_pred             HHHHHHHHHHHHhhcchhHhhhhhhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeEEEE
Q 019718           61 MIVGEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVI  124 (336)
Q Consensus        61 ~~~g~~~~~~al~~ap~slV~Pl~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lvv~  124 (336)
                      ..+++.++.-++...+++.+....-+..+++ ++++..+++|+++..+++|+++++.|+.++..
T Consensus       266 t~lay~lw~~~v~~~ga~~as~~~~L~PV~a-~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~  328 (358)
T PLN00411        266 TSVYYVIHSWTVRHKGPLYLAIFKPLSILIA-VVMGAIFLNDSLYLGCLIGGILITLGFYAVMW  328 (358)
T ss_pred             HHHHHHHHHHHHhccCchHHHHHHhHHHHHH-HHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence            2236667778889999999999999999999 99999999999999999999999999877644

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=97.38  E-value=0.00093  Score=63.60  Aligned_cols=117  Identities=15%  Similarity=0.071  Sum_probs=85.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhHHhhhccCC-C---------------ccCCCccccchhhhHH----HHHHHHHHH
Q 019718            5 ENSKGLILAVASSAFIGSSFILKKKGLKRAGASG-T---------------RAGVGGYTYLLEPLWW----AGMVTMIVG   64 (336)
Q Consensus         5 ~~~iGv~LAl~sa~~~a~G~vlqk~~~~~~~~~~-~---------------~~~~~~~~~~~~p~W~----~G~~~~~~g   64 (336)
                      ....|..+++.++++.|.+.+.+||..++.+... .               -.+...........|+    .|....+++
T Consensus       147 ~~~~G~l~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~  226 (292)
T PRK11272        147 GNPWGAILILIASASWAFGSVWSSRLPLPVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIA  226 (292)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHH
Confidence            3457999999999999999999988533211100 0               0000000001112332    344445677


Q ss_pred             HHHHHHHHhhcchhHhhhhhhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeEE
Q 019718           65 EVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVI  122 (336)
Q Consensus        65 ~~~~~~al~~ap~slV~Pl~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lv  122 (336)
                      ..++..++...|.+.+..+..+..+++ .+++.+++||+++..++.|+++++.|+.+.
T Consensus       227 ~~l~~~~~~~~~~~~~s~~~~l~Pi~a-~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~  283 (292)
T PRK11272        227 ISAYMYLLRNVRPALATSYAYVNPVVA-VLLGTGLGGETLSPIEWLALGVIVFAVVLV  283 (292)
T ss_pred             HHHHHHHHhhcCHHHHHHHHHHHHHHH-HHHHHHHcCCCCcHHHHHHHHHHHHHHHHH
Confidence            788999999999999999999999999 999999999999999999999999998654

>PRK11689 aromatic amino acid exporter; Provisional

Probab=97.37  E-value=0.00084  Score=64.03  Aligned_cols=115  Identities=16%  Similarity=0.070  Sum_probs=83.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhHHhhhccCCCcc---C---------CCccccchhh-hH----HHHHHHHHHHHHHH
Q 019718            6 NSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRA---G---------VGGYTYLLEP-LW----WAGMVTMIVGEVAN   68 (336)
Q Consensus         6 ~~iGv~LAl~sa~~~a~G~vlqk~~~~~~~~~~~~~---~---------~~~~~~~~~p-~W----~~G~~~~~~g~~~~   68 (336)
                      ...|..+++.|+++.+.+.++.||-.++.+......   +         .+....-.++ .|    +.| ...++++.++
T Consensus       154 ~~~G~~~~l~aa~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~-~~t~~~~~l~  232 (295)
T PRK11689        154 NPLSYGLAFIGAFIWAAYCNVTRKYARGKNGITLFFILTALALWIKYFLSPQPAMVFSLPAIIKLLLAA-AAMGFGYAAW  232 (295)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHhcCccccCCHHHHHHHHHHH-HHHHHHHHHH
Confidence            356999999999999999999999543221100000   0         0000001112 22    222 2345677888


Q ss_pred             HHHHhhcchhHhhhhhhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeEE
Q 019718           69 FVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVI  122 (336)
Q Consensus        69 ~~al~~ap~slV~Pl~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lv  122 (336)
                      ..++...|.+.+.++..+..+++ .+++..++||+++..+++|.++++.|+.+.
T Consensus       233 ~~al~~~~a~~~s~~~~l~Pv~a-~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~  285 (295)
T PRK11689        233 NVGILHGNMTLLATASYFTPVLS-AALAALLLSTPLSFSFWQGVAMVTAGSLLC  285 (295)
T ss_pred             HHHHHccCHHHHHHHHHhHHHHH-HHHHHHHhCCCCcHHHHHHHHHHHHhHHHH
Confidence            99999999999999999999999 999999999999999999999999997654

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.35  E-value=0.0077  Score=56.43  Aligned_cols=68  Identities=21%  Similarity=0.341  Sum_probs=63.4

Q ss_pred             HHHHHHHHHHHHHHhhcchhHhhhhhhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeEEEEecC
Q 019718           59 VTMIVGEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAP  127 (336)
Q Consensus        59 ~~~~~g~~~~~~al~~ap~slV~Pl~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lvv~~~~  127 (336)
                      ++|.+.+.+.+.++...+.+.-|=+....++++ ++++.++||+|+++++|++..+.++|++++-..+.
T Consensus        25 ~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~T-Al~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~   92 (244)
T PF04142_consen   25 LLYAIQNNLQFVALSYLDPSTFQVLSQSKILFT-ALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSS   92 (244)
T ss_pred             HHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHH-HHHHHHHHHcccchhhHHHHHHHHHHHheeecCCc
Confidence            679999999999999999999999999999999 99999999999999999999999999888755443

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>COG2510 Predicted membrane protein [Function unknown]

Probab=97.32  E-value=0.0012  Score=55.95  Aligned_cols=66  Identities=18%  Similarity=0.240  Sum_probs=49.5

Q ss_pred             HHHHHHHHHHHHHhhccccccchhhhHHHHHHHHHHHHHHHHhcccCCCChhHHHHHHHHHHHHHHhhhhhccc
Q 019718          222 AVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHAT  295 (336)
Q Consensus       222 v~~~~~Q~~~Ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~~~i~GV~lLs~~  295 (336)
                      +.+.+.++.| =+||+.++++.|.|+= -+.+..+++-+.++++|..+.  .+    ..|+.++.+|+++++++
T Consensus        75 la~glswl~Y-f~ALk~G~as~VvPld-k~svvl~~lls~lfL~E~ls~--~~----~iG~~LI~~Gailvs~~  140 (140)
T COG2510          75 LAGGLSWLLY-FRALKKGKASRVVPLD-KTSVVLAVLLSILFLGERLSL--PT----WIGIVLIVIGAILVSLR  140 (140)
T ss_pred             HHHHHHHHHH-HHHHhcCCcceEEEcc-cccHHHHHHHHHHHhcCCCCH--HH----HHHHHHHHhCeeeEecC
Confidence            3444444333 3789999999999985 566777888999999996554  33    37888999999998864

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=97.31  E-value=0.00043  Score=65.47  Aligned_cols=113  Identities=19%  Similarity=0.109  Sum_probs=80.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHhhhccCCCc----c-----C-C---------Ccccc-chhhhH----HHHHHHHHH
Q 019718            8 KGLILAVASSAFIGSSFILKKKGLKRAGASGTR----A-----G-V---------GGYTY-LLEPLW----WAGMVTMIV   63 (336)
Q Consensus         8 iGv~LAl~sa~~~a~G~vlqk~~~~~~~~~~~~----~-----~-~---------~~~~~-~~~p~W----~~G~~~~~~   63 (336)
                      -|..+++.++++.+.+.++.|+..++.+....-    .     . .         +.... ...+.|    +.+....++
T Consensus       144 ~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l  223 (281)
T TIGR03340       144 KAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSMFPYARQILPSATLGGLMIGG  223 (281)
T ss_pred             hHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHHH
Confidence            467788999999999988888753322210000    0     0 0         00000 011122    233344557


Q ss_pred             HHHHHHHHHhhcchhHhhhhhhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeE
Q 019718           64 GEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVV  121 (336)
Q Consensus        64 g~~~~~~al~~ap~slV~Pl~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~l  121 (336)
                      ++.+++.++...|.+.+.++.-++.+++ .+++.+++||+++..++.|.+++.+|+.+
T Consensus       224 ~~~l~~~al~~~~a~~~~~~~~l~pv~a-~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       224 AYALVLWAMTRLPVATVVALRNTSIVFA-VVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHhhCCceEEEeecccHHHHH-HHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            7888899999999999999999999999 99999999999999999999999999754

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=97.30  E-value=0.00017  Score=58.28  Aligned_cols=68  Identities=31%  Similarity=0.438  Sum_probs=61.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcchhHhhhhhhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeEE
Q 019718           54 WWAGMVTMIVGEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVI  122 (336)
Q Consensus        54 W~~G~~~~~~g~~~~~~al~~ap~slV~Pl~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lv  122 (336)
                      ...|.+...++..+...++...|.+.++++..++.+++ .+++..++||+++++++.|+.+++.|+.++
T Consensus        57 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~-~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~  124 (126)
T PF00892_consen   57 LFLGLLGTALAYLLYFYALKYISASIVSILQYLSPVFA-AILGWLFLGERPSWRQIIGIILIIIGVVLI  124 (126)
T ss_pred             hHhhccceehHHHHHHHHHHhcchhHHHHHHHHHHHHH-HHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence            34555556788899999999999999999999999999 999999999999999999999999997653

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=97.19  E-value=0.0026  Score=60.75  Aligned_cols=116  Identities=21%  Similarity=0.198  Sum_probs=83.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhHHhhhccCCCcc---C----------------CCccc-----cchhhh-HH----H
Q 019718            6 NSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRA---G----------------VGGYT-----YLLEPL-WW----A   56 (336)
Q Consensus         6 ~~iGv~LAl~sa~~~a~G~vlqk~~~~~~~~~~~~~---~----------------~~~~~-----~~~~p~-W~----~   56 (336)
                      ...|..+++.++++.+...+++||..++.+....-.   .                .....     .-.++. |+    .
T Consensus       141 ~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  220 (299)
T PRK11453        141 AMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYL  220 (299)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHH
Confidence            347999999999999999999998543222100000   0                00000     001122 22    3


Q ss_pred             HHHHHHHHHHHHHHHHhhcchhHhhhhhhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeEE
Q 019718           57 GMVTMIVGEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVI  122 (336)
Q Consensus        57 G~~~~~~g~~~~~~al~~ap~slV~Pl~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lv  122 (336)
                      |+...++++.+++.++.-.+..-+.++..+..+++ .+++.+++||+++..+++|.++++.|+.+.
T Consensus       221 ~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a-~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~  285 (299)
T PRK11453        221 AFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVG-LASAALLLDERLTGLQFLGAVLIMAGLYIN  285 (299)
T ss_pred             HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH-HHHHHHHhCCCccHHHHHHHHHHHHHHHHH
Confidence            44455667777778888888999999999999999 999999999999999999999999997644

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.18  E-value=0.0062  Score=51.12  Aligned_cols=74  Identities=11%  Similarity=0.268  Sum_probs=56.9

Q ss_pred             HHHHHHHHHHHhhccccccchhhhHHHHHHHHHHHHHHHHhcccCCCChhHHHHHHHHHHHHHHhhhhhccccCCCCCCC
Q 019718          224 CVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTA  303 (336)
Q Consensus       224 ~~~~Q~~~Ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~~~i~GV~lLs~~~~~~~~~~  303 (336)
                      +...=.+++.++++.-|..+.+|+....-.+...+.|.++|+|..+  ..    -.+|+.+++.|++.+....++.++++
T Consensus        39 ~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s--~~----~~~gi~lIi~GVi~l~l~~~~~~~~~  112 (120)
T PRK10452         39 MISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLS--LM----KIAGLTTLVAGIVLIKSGTRKARKPE  112 (120)
T ss_pred             HHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCC--HH----HHHHHHHHHHHHHHhhcCCCCCCccc
Confidence            3333456899999999999999998888888889999999999544  44    34777889999999976555443333

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.13  E-value=0.0082  Score=49.51  Aligned_cols=107  Identities=16%  Similarity=0.191  Sum_probs=69.9

Q ss_pred             hHHHHHHhhhhHHHHHHHHHHHHHHHhhcCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhhHHHHHHHH
Q 019718          176 VYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTL  255 (336)
Q Consensus       176 ~y~~isgllgg~tvl~~K~v~~~l~~~~~g~~~f~~~~~y~ll~~~v~~~~~Q~~~Ln~aL~~~~~~~v~P~~~v~~~~~  255 (336)
                      .|..++.++.....++-|....      .....+.+|...........+...-..++..++++-|....+|+.+ .-++.
T Consensus         4 ~~l~~ai~~ev~g~~~lK~s~~------~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~-l~~v~   76 (111)
T PRK15051          4 LTLVFASLLSVAGQLCQKQATR------PVAIGKRRKHIVLWLGLALACLGLAMVLWLLVLQNVPVGIAYPMLS-LNFVW   76 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhc------cCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHH-HHHHH
Confidence            3444455444444445554221      0012345554444444444444555668889999999999999998 77777


Q ss_pred             HHHHHHHHhcccCCCChhHHHHHHHHHHHHHHhhhhhccc
Q 019718          256 TIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHAT  295 (336)
Q Consensus       256 ~i~~G~i~f~E~~~~~~~~~~~~~~G~~~~i~GV~lLs~~  295 (336)
                      +.+.|..+|+|..  ++.+    .+|..++++|+++++++
T Consensus        77 ~~~~~~l~f~E~l--s~~~----~~Gi~lii~Gv~~i~~~  110 (111)
T PRK15051         77 VTLAAVKLWHEPV--SPRH----WCGVAFIIGGIVILGST  110 (111)
T ss_pred             HHHHHHHHhCCCC--CHHH----HHHHHHHHHHHHHHhcc
Confidence            8889999999954  4554    46777888999988864

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.07  E-value=0.0035  Score=50.04  Aligned_cols=65  Identities=15%  Similarity=0.004  Sum_probs=37.1

Q ss_pred             hhhhHHHHHH-HHHHHHHHHHHHHhhcchhHhhhh-hhhHHHHHHHHHHHHHhcccccccchhhHHHh
Q 019718           50 LEPLWWAGMV-TMIVGEVANFVAYVYAPAVLVTPL-GALSIIIRYAVLAHFMLKERLQKMGILGCITC  115 (336)
Q Consensus        50 ~~p~W~~G~~-~~~~g~~~~~~al~~ap~slV~Pl-~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li  115 (336)
                      +++.|..+.+ ++.++..+...|+...|.++.=|+ .+++.+.. .+.+.++.||+++..++.|+.++
T Consensus        27 ~~~~~~~~~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~-~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   27 TQLIPTILAVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGV-TLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             -------HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHH-HHHHHHHH--------HHHHHHH
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHH-HHHHHHHhCCCCCHHHHhheeeC
Confidence            3455555555 577888899999999999999997 46999999 99999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=96.95  E-value=0.013  Score=48.48  Aligned_cols=79  Identities=14%  Similarity=0.188  Sum_probs=60.7

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhhHHHHHHHHHHHHHHHHhcccCCCChhHHHHHHHHHHHHHHh
Q 019718          209 IAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSG  288 (336)
Q Consensus       209 f~~~~~y~ll~~~v~~~~~Q~~~Ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~~~i~G  288 (336)
                      |++|.+....++   +...-.+++.+++++-|....+|+-...-++...+.|.++|+|..  ++.    -..|..+++.|
T Consensus        27 f~~~~~~i~~~~---~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~--~~~----~~~gi~lIi~G   97 (110)
T PRK09541         27 FTRLWPSVGTII---CYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRL--DLP----AIIGMMLICAG   97 (110)
T ss_pred             CCchhHHHHHHH---HHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCC--CHH----HHHHHHHHHHH
Confidence            777777665433   333344589999999999999999888888889999999999954  444    34677889999


Q ss_pred             hhhhcccc
Q 019718          289 TIILHATR  296 (336)
Q Consensus       289 V~lLs~~~  296 (336)
                      |+.+....
T Consensus        98 Vi~l~l~~  105 (110)
T PRK09541         98 VLVINLLS  105 (110)
T ss_pred             HHHHhcCC
Confidence            99996543

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=96.65  E-value=0.082  Score=51.84  Aligned_cols=76  Identities=12%  Similarity=0.172  Sum_probs=65.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhcchhHhhhhhhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeEEEEecCCC
Q 019718           53 LWWAGMVTMIVGEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQE  129 (336)
Q Consensus        53 ~W~~G~~~~~~g~~~~~~al~~ap~slV~Pl~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lvv~~~~~~  129 (336)
                      .|-+=-++|.+-+-.++++++..|.+.-+....+-+..+ ++++..+|++|+++++|....+..+|+.++=+..+++
T Consensus        94 k~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tT-A~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~  169 (345)
T KOG2234|consen   94 KVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTT-AIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSP  169 (345)
T ss_pred             HHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHH-HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCC
Confidence            334445688888889999999999999999999999999 9999999999999999999999999988775333333

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.63  E-value=0.0044  Score=51.17  Aligned_cols=73  Identities=16%  Similarity=0.212  Sum_probs=60.0

Q ss_pred             chhhhHHHHHHH-HHHHHHHHHHHHhhcchhHhhhh-hhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeEE
Q 019718           49 LLEPLWWAGMVT-MIVGEVANFVAYVYAPAVLVTPL-GALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVI  122 (336)
Q Consensus        49 ~~~p~W~~G~~~-~~~g~~~~~~al~~ap~slV~Pl-~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lv  122 (336)
                      +++|.|...+.. +++++.+-..|+...|..+.=++ .+++.+.+ .+.+.++.||+++..++.|..+++.|++.+
T Consensus        32 f~~~~~~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~-~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         32 FRRKIYGILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAAT-LAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHH-HHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            456777666654 56677777788888999988776 45888999 999999999999999999999999997654

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.60  E-value=0.0053  Score=50.35  Aligned_cols=72  Identities=15%  Similarity=0.038  Sum_probs=59.2

Q ss_pred             hhhhHHHHHH-HHHHHHHHHHHHHhhcchhHhhhh-hhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeEE
Q 019718           50 LEPLWWAGMV-TMIVGEVANFVAYVYAPAVLVTPL-GALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVI  122 (336)
Q Consensus        50 ~~p~W~~G~~-~~~~g~~~~~~al~~ap~slV~Pl-~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lv  122 (336)
                      +++.|+..+. ++.+++.+-..|+...|.++.=++ .+++.+.+ .+.+.++.||+++..++.|+.+++.|++.+
T Consensus        27 ~~~~~~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~-~lig~~~f~e~~~~~~~~gi~lIi~GVv~l  100 (105)
T PRK11431         27 SRLTPSIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGA-AITGIVLLGESASPARLLSLALIVAGIIGL  100 (105)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHH-HHHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence            3566655543 466777777888888999888776 45999999 999999999999999999999999998765

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.57  E-value=0.033  Score=45.65  Aligned_cols=80  Identities=10%  Similarity=0.138  Sum_probs=61.5

Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhhHHHHHHHHHHHHHHHHhcccCCCChhHHHHHHHHHHHHH
Q 019718          207 SQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVL  286 (336)
Q Consensus       207 ~~f~~~~~y~ll~~~v~~~~~Q~~~Ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~~~i  286 (336)
                      +.|++|.++++.++....   =.+++.+|+|.-|..+.+++-...=++...+.|.++|+|..+  +.+    .+|+.+++
T Consensus        24 ~gf~~~~~~~~~i~~~~~---sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~--~~~----~~gi~lIi   94 (105)
T PRK11431         24 HGFSRLTPSIITVTAMIV---SMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESAS--PAR----LLSLALIV   94 (105)
T ss_pred             hCCccHHHHHHHHHHHHH---HHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCC--HHH----HHHHHHHH
Confidence            347888777765444433   345899999999999999999888889999999999999554  443    46678899


Q ss_pred             Hhhhhhccc
Q 019718          287 SGTIILHAT  295 (336)
Q Consensus       287 ~GV~lLs~~  295 (336)
                      .||+.|...
T Consensus        95 ~GVv~l~l~  103 (105)
T PRK11431         95 AGIIGLKLS  103 (105)
T ss_pred             HHHHhhhcc
Confidence            999988543

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=96.57  E-value=0.01  Score=54.75  Aligned_cols=114  Identities=25%  Similarity=0.247  Sum_probs=82.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhHHhhhccCC-Cc------cC--------CCc-cccc-hhhhH--HHHHHHHHHHHHH
Q 019718            7 SKGLILAVASSAFIGSSFILKKKGLKRAGASG-TR------AG--------VGG-YTYL-LEPLW--WAGMVTMIVGEVA   67 (336)
Q Consensus         7 ~iGv~LAl~sa~~~a~G~vlqk~~~~~~~~~~-~~------~~--------~~~-~~~~-~~p~W--~~G~~~~~~g~~~   67 (336)
                      ..|+.+++.++++.+...+++|+.. +.+... ..      ..        ... .+.. +...+  +.|+....++..+
T Consensus       153 ~~g~~~~l~a~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~  231 (292)
T COG0697         153 LLGLLLALAAALLWALYTALVKRLS-RLGPVTLALLLQLLLALLLLLLFFLSGFGAPILSRAWLLLLYLGVFSTGLAYLL  231 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHHHHH
Confidence            5899999999999999999999754 211100 00      00        000 0111 11111  2334444467788


Q ss_pred             HHHHHhhcchhHhhhhhhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeEE
Q 019718           68 NFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVI  122 (336)
Q Consensus        68 ~~~al~~ap~slV~Pl~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lv  122 (336)
                      +..++...|.+.++++..+..+++ .+++.++++|+++.+++.|+++++.|+.+.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~l~~~e~~~~~~~~G~~li~~g~~l~  285 (292)
T COG0697         232 WYYALRLLGASLVALLSLLEPVFA-ALLGVLLLGEPLSPAQLLGAALVVLGVLLA  285 (292)
T ss_pred             HHHHHHhcCchHHHHHHHHHHHHH-HHHHHHHhCCCCcHHHHHHHHHHHHHHHHH
Confidence            889999999999999999999999 999999999999999999999999997654

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=96.47  E-value=0.22  Score=47.77  Aligned_cols=76  Identities=18%  Similarity=0.239  Sum_probs=55.8

Q ss_pred             ccccchhhhHHHHHHHHHHHHHHHHHHHhhcchh---HhhhhhhhHH-HHHHHHHHHHHhcccccccchhhHHHhhccee
Q 019718           45 GYTYLLEPLWWAGMVTMIVGEVANFVAYVYAPAV---LVTPLGALSI-IIRYAVLAHFMLKERLQKMGILGCITCIVGSV  120 (336)
Q Consensus        45 ~~~~~~~p~W~~G~~~~~~g~~~~~~al~~ap~s---lV~Pl~a~~l-v~~~~~la~~~l~e~~~~~~~~G~~li~~G~~  120 (336)
                      .++..|+|+=+....+..+=...|..-+-+||-+   +=+.+|=.=. ++| +++++.++|||+++.+|+++.+..+|+.
T Consensus        62 ~~~~~~~p~~~~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~-VllG~lflkErls~~Q~iAV~lA~~GV~  140 (293)
T COG2962          62 LKQLLKQPKTLLMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVN-VLLGRLFLKERLSRLQWIAVGLAAAGVL  140 (293)
T ss_pred             HHHHHhCcHHHHHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHH-HHHHHHHHHhhccHHHHHHHHHHHHHHH
Confidence            3456778877777766655556777777777755   3344443322 345 9999999999999999999999999975


Q ss_pred             E
Q 019718          121 V  121 (336)
Q Consensus       121 l  121 (336)
                      .
T Consensus       141 ~  141 (293)
T COG2962         141 I  141 (293)
T ss_pred             H
Confidence            4

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=96.29  E-value=0.019  Score=54.83  Aligned_cols=62  Identities=11%  Similarity=-0.045  Sum_probs=56.6

Q ss_pred             HHHHHHHHHHHHhhcchhHhhhhhhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeEEE
Q 019718           61 MIVGEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIV  123 (336)
Q Consensus        61 ~~~g~~~~~~al~~ap~slV~Pl~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lvv  123 (336)
                      ..+++.+.+.++...|.+.++++.-++.+++ .+++.++++|+++...+.|++++++|+.++.
T Consensus       223 t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a-~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~  284 (296)
T PRK15430        223 TTVPLLCFTAAATRLRLSTLGFFQYIGPTLM-FLLAVTFYGEKPGADKMVTFAFIWVALAIFV  284 (296)
T ss_pred             HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-HHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence            3367889999999999999999999999999 9999999999999999999999988876553

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.27  E-value=0.058  Score=44.56  Aligned_cols=78  Identities=14%  Similarity=0.229  Sum_probs=59.8

Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhhHHHHHHHHHHHHHHHHhcccCCCChhHHHHHHHHHHHHH
Q 019718          207 SQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVL  286 (336)
Q Consensus       207 ~~f~~~~~y~ll~~~v~~~~~Q~~~Ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~~~i  286 (336)
                      +.|++|.+.+..++....   =.+++.+|+|+-|....+|+-...-++...+.|.++|+|..  ++.+    .+|..+++
T Consensus        30 ~gf~~~~~~~~~~~~~~~---sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~--~~~~----~~gi~lIi  100 (109)
T PRK10650         30 DGFRRKIYGILSLAAVLA---AFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRL--NRKG----WIGLVLLL  100 (109)
T ss_pred             cCCcchHHHHHHHHHHHH---HHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCC--CHHH----HHHHHHHH
Confidence            347888776655444333   34589999999999999999998888999999999999954  4443    46777888


Q ss_pred             Hhhhhhc
Q 019718          287 SGTIILH  293 (336)
Q Consensus       287 ~GV~lLs  293 (336)
                      .|++.|.
T Consensus       101 ~GVi~lk  107 (109)
T PRK10650        101 AGMVMIK  107 (109)
T ss_pred             HHHHHhc
Confidence            8988873

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.23  E-value=0.062  Score=44.14  Aligned_cols=78  Identities=15%  Similarity=0.158  Sum_probs=59.8

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhhHHHHHHHHHHHHHHHHhcccCCCChhHHHHHHHHHHHHHHh
Q 019718          209 IAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSG  288 (336)
Q Consensus       209 f~~~~~y~ll~~~v~~~~~Q~~~Ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~~~i~G  288 (336)
                      |+++.++++.++.....   .++|.+|+|+-|....+++-.-.=+....+.|.++|+|..+  +.    -..|+.++++|
T Consensus        27 f~~~~~~il~~v~~~~s---f~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~--~~----~~~gl~LiiaG   97 (106)
T COG2076          27 FTRLWPSILTIVGYGLS---FYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLS--LI----KLLGLALILAG   97 (106)
T ss_pred             ccccchHHHHHHHHHHH---HHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCC--HH----HHHHHHHHHHH
Confidence            66766666544444333   34899999999999999999999999999999999999654  43    34677889999


Q ss_pred             hhhhccc
Q 019718          289 TIILHAT  295 (336)
Q Consensus       289 V~lLs~~  295 (336)
                      ++.|...
T Consensus        98 vi~Lk~~  104 (106)
T COG2076          98 VIGLKLG  104 (106)
T ss_pred             HHHhhhc
Confidence            9988643

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=96.22  E-value=0.13  Score=43.66  Aligned_cols=74  Identities=11%  Similarity=0.150  Sum_probs=53.8

Q ss_pred             HHHHHHHHHHHHHHHHHhhccccccchhhhHHHHHHHHHHHHHH-HHhcccCCCChhHHHHHHHHHHHHHHhhhhhcccc
Q 019718          218 LTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASA-IMFKDWSGQDVSGIASEICGFITVLSGTIILHATR  296 (336)
Q Consensus       218 l~~~v~~~~~Q~~~Ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~-i~f~E~~~~~~~~~~~~~~G~~~~i~GV~lLs~~~  296 (336)
                      +...+++...-..+.+.++++.|.+..+|+....+....+.+-. ++|+|..  ++.    -.+|.++++.||+++++++
T Consensus        51 i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~l--s~~----~~iGi~lIi~GV~lv~~~~  124 (129)
T PRK02971         51 VLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETF--SLK----KTLGVACIMLGVWLINLPT  124 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCC--CHH----HHHHHHHHHHHHHHhccCC
Confidence            33444555555668999999999999999998887555444433 4899954  444    4578889999999998654


Q ss_pred             C
Q 019718          297 E  297 (336)
Q Consensus       297 ~  297 (336)
                      +
T Consensus       125 ~  125 (129)
T PRK02971        125 T  125 (129)
T ss_pred             C
Confidence            4

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.15  E-value=0.01  Score=48.72  Aligned_cols=73  Identities=12%  Similarity=0.080  Sum_probs=59.2

Q ss_pred             chhhhHHHHHHH-HHHHHHHHHHHHhhcchhHhhh-hhhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeEE
Q 019718           49 LLEPLWWAGMVT-MIVGEVANFVAYVYAPAVLVTP-LGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVI  122 (336)
Q Consensus        49 ~~~p~W~~G~~~-~~~g~~~~~~al~~ap~slV~P-l~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lv  122 (336)
                      ++|+.|.+.+.. +++.+.+-..|+...|..+.=+ -.+++.+.+ .+.+.+++||+++..+++|..++++|++.+
T Consensus        27 f~~~~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~-~l~g~~~f~E~l~~~~~~gl~LiiaGvi~L  101 (106)
T COG2076          27 FTRLWPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGT-ALVGVLLFGESLSLIKLLGLALILAGVIGL  101 (106)
T ss_pred             ccccchHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHH-HHHHHHhcCCcCCHHHHHHHHHHHHHHHHh
Confidence            345666665554 6677777778888888887655 478899999 999999999999999999999999997654

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=95.92  E-value=0.26  Score=48.92  Aligned_cols=87  Identities=17%  Similarity=0.245  Sum_probs=66.1

Q ss_pred             HHHHHHHHHHHHHH---HHHhhcchhHhhhhhhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeEEEEecCCCCCC
Q 019718           56 AGMVTMIVGEVANF---VAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEHTP  132 (336)
Q Consensus        56 ~G~~~~~~g~~~~~---~al~~ap~slV~Pl~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lvv~~~~~~~~~  132 (336)
                      .++....+-+.+|+   .||++-.++-.+=+.+.+=+|+ +.++..+.+||++....++.++.+.|++++.....++.+.
T Consensus       161 ~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~Ft-L~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~  239 (416)
T KOG2765|consen  161 LSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFT-LFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSD  239 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHH-HHHHHHcCcchhhHHHHHHHHHhhccEEEEEecccccccc
Confidence            44444444444444   6799999999999999999999 9999999999999999999999999998887765544332


Q ss_pred             -----CCHHHHHHHhc
Q 019718          133 -----NSVQEIWALAT  143 (336)
Q Consensus       133 -----~t~~el~~~~~  143 (336)
                           ....+++.++.
T Consensus       240 ~~a~~~llG~llaL~s  255 (416)
T KOG2765|consen  240 LPASRPLLGNLLALLS  255 (416)
T ss_pred             CCccchhHHHHHHHHH
Confidence                 23445555443

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=95.67  E-value=0.099  Score=41.62  Aligned_cols=65  Identities=11%  Similarity=0.052  Sum_probs=32.1

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhhHHHHHHHHHHHHHHHHhcccCCCChhHHHHH
Q 019718          209 IAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASE  278 (336)
Q Consensus       209 f~~~~~y~ll~~~v~~~~~Q~~~Ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~  278 (336)
                      ++++......++   +...-.+++.+|+|+-|..+.+|+....-++...+.|..+|+|..  ++.++++.
T Consensus        26 ~~~~~~~~~~~~---~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~--s~~~~~gi   90 (93)
T PF00893_consen   26 FTQLIPTILAVV---GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESL--SLSKWLGI   90 (93)
T ss_dssp             --------HHHH---HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH----------HHHH
T ss_pred             hcchhhHHHHHH---HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCC--CHHHHhhe
Confidence            556655444332   444445699999999999999999998888889999999999954  45555443

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=95.42  E-value=0.063  Score=51.32  Aligned_cols=113  Identities=20%  Similarity=0.217  Sum_probs=81.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhHHhhhccCC--Ccc-C---CC-----c----cccchhhhHH----HHHHHHHHHHHH
Q 019718            7 SKGLILAVASSAFIGSSFILKKKGLKRAGASG--TRA-G---VG-----G----YTYLLEPLWW----AGMVTMIVGEVA   67 (336)
Q Consensus         7 ~iGv~LAl~sa~~~a~G~vlqk~~~~~~~~~~--~~~-~---~~-----~----~~~~~~p~W~----~G~~~~~~g~~~   67 (336)
                      ..|+..++.|+++.+.-.+.-|+.. ..+...  +.. +   ..     .    ++. .++.+|    .|+. ..+++.+
T Consensus       151 ~~Gi~~~l~sg~~y~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Gi~-~~ia~~~  227 (290)
T TIGR00776       151 KKGILLLLMSTIGYLVYVVVAKAFG-VDGLSVLLPQAIGMVIGGIIFNLGHILAKPL-KKYAILLNILPGLM-WGIGNFF  227 (290)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHcC-CCcceehhHHHHHHHHHHHHHHHHHhcccch-HHHHHHHHHHHHHH-HHHHHHH
Confidence            5699999999999988888777532 111100  000 0   00     0    111 222333    4444 4677778


Q ss_pred             HHHHHh-hcchhHhhhhhhhHHHHHHHHHHHHHhcccccccch----hhHHHhhcceeEEE
Q 019718           68 NFVAYV-YAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGI----LGCITCIVGSVVIV  123 (336)
Q Consensus        68 ~~~al~-~ap~slV~Pl~a~~lv~~~~~la~~~l~e~~~~~~~----~G~~li~~G~~lvv  123 (336)
                      .+.+.. ..+.+.-.++..+..+.+ .+.+-+++||+.+++++    +|+++++.|+.++.
T Consensus       228 y~~~~~~~~~~~~~~~ls~~~pvia-~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~  287 (290)
T TIGR00776       228 YLFSAQPKVGVATSFSLSQLGVIIS-TLGGILILGEKKTKREMIAISVGIILIIIAANILG  287 (290)
T ss_pred             HHHHcccccchhhHHHHHHHHHHHH-HHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence            888888 999999999999999999 99999999999999999    99999999987653

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=95.37  E-value=0.27  Score=40.10  Aligned_cols=70  Identities=16%  Similarity=0.168  Sum_probs=49.9

Q ss_pred             HHHHHHHHHHHHhhccccccchhhhHHHHHHHHHHHHHHHHhcccCCCChhHHHHHHHHHHHHHHhhhhhccccCCCC
Q 019718          223 VCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQ  300 (336)
Q Consensus       223 ~~~~~Q~~~Ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~~~i~GV~lLs~~~~~~~  300 (336)
                      .+...+......|++..+ ..+.| .....++++.+.|.++|+|  +.++..    ..|.+++.+|++++..++...+
T Consensus        43 ~~~~~~~~~~~~a~~~~~-~~v~~-i~~~~pi~~~ll~~~~~~e--r~~~~~----~~a~~l~~~Gv~li~~~~~~~~  112 (113)
T PF13536_consen   43 LGFGVAYLLFFYALSYAP-ALVAA-IFSLSPIFTALLSWLFFKE--RLSPRR----WLAILLILIGVILIAWSDLTGA  112 (113)
T ss_pred             HHHHHHHHHHHHHHHhCc-HHHHH-HHHHHHHHHHHHHHHHhcC--CCCHHH----HHHHHHHHHHHHHHhhhhcccC
Confidence            333344556677888888 45554 4557999999999999999  445553    3566788899999987766543

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=95.35  E-value=0.12  Score=50.69  Aligned_cols=126  Identities=21%  Similarity=0.229  Sum_probs=79.5

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHhHHhhhccCC--CccC-------------CCccccchhhhHHHHHHH-HHHHHH
Q 019718            3 LSENSKGLILAVASSAFIGSSFILKKKGLKRAGASG--TRAG-------------VGGYTYLLEPLWWAGMVT-MIVGEV   66 (336)
Q Consensus         3 ~~~~~iGv~LAl~sa~~~a~G~vlqk~~~~~~~~~~--~~~~-------------~~~~~~~~~p~W~~G~~~-~~~g~~   66 (336)
                      .++.++|-++++.||++.|+..++|++-.++.++..  ..-|             .+ ++-+++-.|-..... ++...+
T Consensus       163 ~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~iq~~ile-~~~i~~~~w~~~~~~~~v~~~~  241 (334)
T PF06027_consen  163 GSNPILGDLLALLGAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISGIQLAILE-RSGIESIHWTSQVIGLLVGYAL  241 (334)
T ss_pred             CCccchhHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHhee-hhhhhccCCChhhHHHHHHHHH
Confidence            467889999999999999999999999766544200  0000             00 111111112112222 323334


Q ss_pred             HHHHHHhhcchhHh------hhhh-hhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeEEEEecCCCC
Q 019718           67 ANFVAYVYAPAVLV------TPLG-ALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEH  130 (336)
Q Consensus        67 ~~~~al~~ap~slV------~Pl~-a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lvv~~~~~~~  130 (336)
                      +.+.-|...|..+-      .-++ ..+-+++ +++..++.|+++++.-++|.+++++|.++.....++++
T Consensus       242 ~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~a-li~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~~  311 (334)
T PF06027_consen  242 CLFLFYSLVPIVLRMSSATFFNLSLLTSDFYA-LIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPEE  311 (334)
T ss_pred             HHHHHHHHHHHHHHhCccceeehHHHHhhHHH-HHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCccc
Confidence            56666666666432      1222 3457788 89999999999999999999999999877665444443

Some of the sequences in this family are annotated as putative membrane proteins.

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=95.00  E-value=0.15  Score=43.10  Aligned_cols=112  Identities=21%  Similarity=0.283  Sum_probs=75.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhHHhhh----cc-------------------------CCCccCCCcccc-------chhh
Q 019718            9 GLILAVASSAFIGSSFILKKKGLKRA----GA-------------------------SGTRAGVGGYTY-------LLEP   52 (336)
Q Consensus         9 Gv~LAl~sa~~~a~G~vlqk~~~~~~----~~-------------------------~~~~~~~~~~~~-------~~~p   52 (336)
                      |.++++.|+++.++=.+++|+..++.    +.                         +.++........       ..+.
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            67899999999999999999876663    11                         000000000001       1122


Q ss_pred             hHHHHHHH--HHHHHHHHHHHHhhcchhHhhhhhhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeE
Q 019718           53 LWWAGMVT--MIVGEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVV  121 (336)
Q Consensus        53 ~W~~G~~~--~~~g~~~~~~al~~ap~slV~Pl~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~l  121 (336)
                      .++.....  ..+-+..++..+....+..-+=++.+--+.+ .+++..+++|+++...+.|+.+++.|..+
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~-i~~s~~~f~~~~t~~~~~G~~l~~~G~~~  150 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILV-ILLSVIFFGEPITPLQIIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHH-HHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence            22221111  2233445566677777778888899999999 99999999999999999999999999753

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=94.76  E-value=0.48  Score=45.36  Aligned_cols=79  Identities=13%  Similarity=0.206  Sum_probs=57.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhc-chhHhhhhhhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeEEEEecCCCC
Q 019718           52 PLWWAGMVTMIVGEVANFVAYVYA-PAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEH  130 (336)
Q Consensus        52 p~W~~G~~~~~~g~~~~~~al~~a-p~slV~Pl~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lvv~~~~~~~  130 (336)
                      +.|..=..++..-++.|=.|+.|. |.-+=.=+=+.+++.| +.++..++|+|-+.+++..++++.+|+++.-.++.++.
T Consensus        65 k~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~n-M~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~  143 (330)
T KOG1583|consen   65 KDYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLAN-MILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDG  143 (330)
T ss_pred             hhhheehheeeeeeeeccceeeecccceEEEEEecCcHHHH-HHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcch
Confidence            445554555555566676777664 2222222456788888 99999999999999999999999999988877776655


Q ss_pred             C
Q 019718          131 T  131 (336)
Q Consensus       131 ~  131 (336)
                      .
T Consensus       144 ~  144 (330)
T KOG1583|consen  144 R  144 (330)
T ss_pred             h
Confidence            3

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=94.18  E-value=0.31  Score=46.50  Aligned_cols=68  Identities=10%  Similarity=0.225  Sum_probs=53.5

Q ss_pred             HHHhhccccccchhhhHHHHHHHHHHHHHHHHhcccCCCChhHHHHHHHHHHHHHHhhhhhccccCCCCC
Q 019718          232 LNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQT  301 (336)
Q Consensus       232 Ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~~~i~GV~lLs~~~~~~~~  301 (336)
                      .=++.+.-.-+...|+-+..--+.+.+.|.++|+||...  .++..=.+++++++.|+++-+.+++.++.
T Consensus        62 qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~--~~~~~G~~Al~liiiGv~lts~~~~~~~~  129 (269)
T PF06800_consen   62 QFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTT--TQKIIGFLALVLIIIGVILTSYQDKKSDK  129 (269)
T ss_pred             HHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCc--chHHHHHHHHHHHHHHHHHhccccccccc
Confidence            334566666678899999999999999999999999864  46666667889999999987776666553

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=93.58  E-value=0.25  Score=39.50  Aligned_cols=69  Identities=19%  Similarity=0.284  Sum_probs=49.9

Q ss_pred             HHHHHHHHHHHHHHHHHhhccccccchhhhHHHHHHHHHHHHHHHHhcccCCCChhHHHHHHHHHHHHHHhhhhhc
Q 019718          218 LTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILH  293 (336)
Q Consensus       218 l~~~v~~~~~Q~~~Ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~~~i~GV~lLs  293 (336)
                      +.....+...-....+.++++-+++.+.++.+ ..++.+.+.+.++++|..  ++.    ...|.++++.|+++++
T Consensus        57 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~-~~pv~~~i~~~~~~~e~~--~~~----~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   57 LFLGLLGTALAYLLYFYALKYISASIVSILQY-LSPVFAAILGWLFLGERP--SWR----QIIGIILIIIGVVLIS  125 (126)
T ss_pred             hHhhccceehHHHHHHHHHHhcchhHHHHHHH-HHHHHHHHHHHHHcCCCC--CHH----HHHHHHHHHHHHHHHH
Confidence            33333444445667888999999999888877 789999999999999954  444    3455666777776653

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=93.50  E-value=0.18  Score=47.98  Aligned_cols=117  Identities=15%  Similarity=0.179  Sum_probs=76.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhHHhhhccCCCcc-------C----------CCccccch------------hhhHH
Q 019718            5 ENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRA-------G----------VGGYTYLL------------EPLWW   55 (336)
Q Consensus         5 ~~~iGv~LAl~sa~~~a~G~vlqk~~~~~~~~~~~~~-------~----------~~~~~~~~------------~p~W~   55 (336)
                      ...+|..+++.|+++.++..++.||..++.+.++...       +          .+..+...            ...|.
T Consensus       142 ~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (302)
T TIGR00817       142 FNWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYT  221 (302)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHH
Confidence            3567999999999999999999888544111110000       0          00000000            01121


Q ss_pred             HHHH----HHHHHHHHHHHHHhhcchhHhhhhhhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeEE
Q 019718           56 AGMV----TMIVGEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVI  122 (336)
Q Consensus        56 ~G~~----~~~~g~~~~~~al~~ap~slV~Pl~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lv  122 (336)
                      .+..    ++...+..++.++...+.+...-.+.+.-+++ .+++.++++|+++..++.|.++++.|+.+.
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~-~~~~~~~lge~lt~~~~~G~~lil~Gv~l~  291 (302)
T TIGR00817       222 VSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVV-IVVSILFFGTKISPQQVFGTGIAIAGVFLY  291 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhhe-eeeehhhcCCCCchhHHHHHHHHHHHHHHH
Confidence            1211    11122234456777888888888888999999 999999999999999999999999997653

specificities overlap.

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=93.44  E-value=0.59  Score=44.21  Aligned_cols=117  Identities=19%  Similarity=0.182  Sum_probs=84.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhHHhhhccCCCcc---------------C-CCccccchhhh-HHHHHHHHH----H
Q 019718            5 ENSKGLILAVASSAFIGSSFILKKKGLKRAGASGTRA---------------G-VGGYTYLLEPL-WWAGMVTMI----V   63 (336)
Q Consensus         5 ~~~iGv~LAl~sa~~~a~G~vlqk~~~~~~~~~~~~~---------------~-~~~~~~~~~p~-W~~G~~~~~----~   63 (336)
                      -...|+.+|+.+..|-+.=.+.-||.-+..+  +++.               | ...-+-+.+|. -..++..-+    +
T Consensus       145 lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~--g~~g~a~gm~vAaviv~Pig~~~ag~~l~~p~ll~laLgvavlSSal  222 (292)
T COG5006         145 LDPVGVALALGAGACWALYIVLGQRAGRAEH--GTAGVAVGMLVAALIVLPIGAAQAGPALFSPSLLPLALGVAVLSSAL  222 (292)
T ss_pred             CCHHHHHHHHHHhHHHHHHHHHcchhcccCC--CchHHHHHHHHHHHHHhhhhhhhcchhhcChHHHHHHHHHHHHhccc
Confidence            3568999999999998877777666543211  1100               0 00122333443 334443333    4


Q ss_pred             HHHHHHHHHhhcchhHhhhhhhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeEEEE
Q 019718           64 GEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVI  124 (336)
Q Consensus        64 g~~~~~~al~~ap~slV~Pl~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lvv~  124 (336)
                      =+.+..+|+.-.|...-.-+.++.-.+. .+.+..+|+|++|..+|.|+++++.++.-...
T Consensus       223 PYsLEmiAL~rlp~~~F~~LlSLePa~a-Al~G~i~L~e~ls~~qwlaI~~ViaAsaG~~l  282 (292)
T COG5006         223 PYSLEMIALRRLPARTFGTLLSLEPALA-ALSGLIFLGETLTLIQWLAIAAVIAASAGSTL  282 (292)
T ss_pred             chHHHHHHHhhCChhHHHHHHHhhHHHH-HHHHHHHhcCCCCHHHHHHHHHHHHHHhcccc
Confidence            4458899999999999999999999999 99999999999999999999999998765544

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=93.37  E-value=0.28  Score=40.80  Aligned_cols=101  Identities=12%  Similarity=0.090  Sum_probs=64.7

Q ss_pred             HHhhhhHHHHHHHHHHHHHHHh------hc-CCcccchhHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhhHHHHHH
Q 019718          181 CSLMGSLTVVSIKAIGIAIKLT------LD-GISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFT  253 (336)
Q Consensus       181 sgllgg~tvl~~K~v~~~l~~~------~~-g~~~f~~~~~y~ll~~~v~~~~~Q~~~Ln~aL~~~~~~~v~P~~~v~~~  253 (336)
                      .|++.|.|..+.|.-+.-....      .+ -...+.+|+..+-++.-..+.+    ...-.|.+.|-+..+|+.+..--
T Consensus         4 Vg~~WG~Tnpfik~g~~~~~~~~~~~~~~~~~~~Ll~n~~y~ipf~lNq~GSv----~f~~~L~~~dlSlavPi~Nsl~f   79 (113)
T PF10639_consen    4 VGILWGCTNPFIKRGSSGLEKVKASLQLLQEIKFLLLNPKYIIPFLLNQSGSV----LFFLLLGSADLSLAVPIANSLAF   79 (113)
T ss_pred             ehHHhcCchHHHHHHHhhcCCccchHHHHHHHHHHHHhHHHHHHHHHHHHHHH----HHHHHHhcCCceeeehHHhHHHH
Confidence            3555566666666544321100      00 0123566776665555555555    45667888999999999988888


Q ss_pred             HHHHHHHHHHhcccCCCChhHHHHHHHHHHHHHHhhhh
Q 019718          254 TLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTII  291 (336)
Q Consensus       254 ~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~~~i~GV~l  291 (336)
                      +++.+.|..+.+|...  +.    -.+|..++++|+.+
T Consensus        80 vfT~l~g~~lge~~~~--~~----~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   80 VFTALTGWLLGEEVIS--RR----TWLGMALILAGVAL  111 (113)
T ss_pred             HHHHHHHHHhcCcccc--hh----HHHHHHHHHcCeee
Confidence            8899999877777543  22    34777788888765

Many members are annotated as potential transmembrane proteins.

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=92.99  E-value=0.61  Score=44.81  Aligned_cols=71  Identities=17%  Similarity=0.220  Sum_probs=63.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcchhHhhhhhhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeEEEEe
Q 019718           54 WWAGMVTMIVGEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIH  125 (336)
Q Consensus        54 W~~G~~~~~~g~~~~~~al~~ap~slV~Pl~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lvv~~  125 (336)
                      ...=.++.+.|.....++|.+..++--|-+-+.-++|+ -+++.-+|+++++.+.|.|+..+.+|.+.+...
T Consensus        89 fl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFv-glfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~  159 (372)
T KOG3912|consen   89 FLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFV-GLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL  159 (372)
T ss_pred             ecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhh-HHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence            33345788899999999999999999999999999999 999999999999999999999999998777553

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=92.02  E-value=0.53  Score=44.66  Aligned_cols=58  Identities=34%  Similarity=0.535  Sum_probs=50.1

Q ss_pred             HHHhhcchhHhhhhhhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeEEEEecCC
Q 019718           70 VAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQ  128 (336)
Q Consensus        70 ~al~~ap~slV~Pl~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lvv~~~~~  128 (336)
                      -|+.+....-++-|-.-+++-- .+++.++||.|-+...+.|++.|+.|+++++...-+
T Consensus        97 ~AyQyTsmtSi~lLDcwaip~v-~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~  154 (336)
T KOG2766|consen   97 KAYQYTSMTSIMLLDCWAIPCV-LVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVH  154 (336)
T ss_pred             eehhhcchHHHHHHHHhhhHHH-HHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeec
Confidence            4677777888888889999999 999999999999999999999999999888654433

>TIGR00803 nst UDP-galactose transporter

Probab=91.87  E-value=0.8  Score=41.60  Aligned_cols=115  Identities=17%  Similarity=0.153  Sum_probs=79.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhHHhhhccC--------------------CCccCC--Cccc-cch-hhhHHHHHHH
Q 019718            5 ENSKGLILAVASSAFIGSSFILKKKGLKRAGAS--------------------GTRAGV--GGYT-YLL-EPLWWAGMVT   60 (336)
Q Consensus         5 ~~~iGv~LAl~sa~~~a~G~vlqk~~~~~~~~~--------------------~~~~~~--~~~~-~~~-~p~W~~G~~~   60 (336)
                      +..+|+.+.+.+.++.+..-+.|+|..++.+..                    ..+++.  ...+ ... .+.+|.=.++
T Consensus        82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (222)
T TIGR00803        82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIVGLL  161 (222)
T ss_pred             cHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHHHHH
Confidence            456677777777777888889998875542210                    000000  0011 111 2233333344


Q ss_pred             HHHHHHHHHHHHhhcchhHhhhhhhhHHHHHHHHHHHHHhcccccccchhhHHHhhccee
Q 019718           61 MIVGEVANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSV  120 (336)
Q Consensus        61 ~~~g~~~~~~al~~ap~slV~Pl~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~  120 (336)
                      ...|..+-...+.+++.....=...+..+++ .+++.++.+|+++...|.|+.++..|+.
T Consensus       162 ~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s-~lls~~~f~~~ls~~~~~g~~lV~~~~~  220 (222)
T TIGR00803       162 NVGGGLCIGGVVRYADNTTKSFVTALSIILS-TLASVRLFDAKISSTFYLGAILVFLATF  220 (222)
T ss_pred             HHhcCceeeehhHHhHHHHHHHHHHHHHHHH-HHHHHHHhcCCccHHHHHHHHHHHeeeE
Confidence            5566666667788888889999999999999 9999999999999999999999998864

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=90.76  E-value=16  Score=34.91  Aligned_cols=194  Identities=10%  Similarity=0.048  Sum_probs=96.8

Q ss_pred             HHHHHHhhcchhHhhhhhhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeEEEEecCCCCCCCCHHHHHHHhcChh
Q 019718           67 ANFVAYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPD  146 (336)
Q Consensus        67 ~~~~al~~ap~slV~Pl~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lvv~~~~~~~~~~t~~el~~~~~~~~  146 (336)
                      +...++...|+-+...+--.+-+.- ..++.    +  +.+|.+.+.+.+.|..++...++..++.....          
T Consensus        87 ~FY~si~riPlGiAVAiEF~GPL~v-A~~~s----R--r~~d~vwvaLAvlGi~lL~p~~~~~~~lDp~G----------  149 (292)
T COG5006          87 LFYLSIERIPLGIAVAIEFTGPLAV-ALLSS----R--RLRDFVWVALAVLGIWLLLPLGQSVWSLDPVG----------  149 (292)
T ss_pred             HHHHHHHhccchhhhhhhhccHHHH-HHHhc----c--chhhHHHHHHHHHHHHhheeccCCcCcCCHHH----------
Confidence            4446777788777665555554444 33322    2  34677788888999877765554444332221          


Q ss_pred             HHHHHHHHHHHHHHHhh-eecccCCCcchhhHHHHHHhhhhHHHHHHHHHHHHHHHhhcCCcccchhHHHHH-HHHHHHH
Q 019718          147 FLIYVAATVSVVLALVL-HFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFF-LTVAAVC  224 (336)
Q Consensus       147 fl~y~~~~~~~~~~li~-~~~~~~g~~~~~~y~~isgllgg~tvl~~K~v~~~l~~~~~g~~~f~~~~~y~l-l~~~v~~  224 (336)
                       ..|......  +.-+| ...+|-|+...---+...|..-+....+--++       .+....+.+|..-.. +.+.+.+
T Consensus       150 -v~~Al~AG~--~Wa~YIv~G~r~g~~~~g~~g~a~gm~vAaviv~Pig~-------~~ag~~l~~p~ll~laLgvavlS  219 (292)
T COG5006         150 -VALALGAGA--CWALYIVLGQRAGRAEHGTAGVAVGMLVAALIVLPIGA-------AQAGPALFSPSLLPLALGVAVLS  219 (292)
T ss_pred             -HHHHHHHhH--HHHHHHHHcchhcccCCCchHHHHHHHHHHHHHhhhhh-------hhcchhhcChHHHHHHHHHHHHh
Confidence             112211111  11112 12344332110001111111111111111111       122345666665433 3334444


Q ss_pred             HHHHHHHHHHhhccccccchhhhHHHHHHHHHHHHHHHHhcccCCCChhHHHHHHHHHHHHHHhhhh
Q 019718          225 VVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTII  291 (336)
Q Consensus       225 ~~~Q~~~Ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~~~i~GV~l  291 (336)
                      ...--..-.-||++-++.. .-+..+..|..+-+.|.++++|..  ++.||+...+= +....|+.+
T Consensus       220 SalPYsLEmiAL~rlp~~~-F~~LlSLePa~aAl~G~i~L~e~l--s~~qwlaI~~V-iaAsaG~~l  282 (292)
T COG5006         220 SALPYSLEMIALRRLPART-FGTLLSLEPALAALSGLIFLGETL--TLIQWLAIAAV-IAASAGSTL  282 (292)
T ss_pred             cccchHHHHHHHhhCChhH-HHHHHHhhHHHHHHHHHHHhcCCC--CHHHHHHHHHH-HHHHhcccc
Confidence            4444444445898877655 455668899999999999999954  57787665543 234445544

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=90.03  E-value=0.4  Score=45.22  Aligned_cols=225  Identities=13%  Similarity=0.183  Sum_probs=132.8

Q ss_pred             ccchhhhHHHHHHH---HHHHHHHHHHHHhhcchhHhhhhh-hhHHHHHHHHHHHHHhcccccccch----hhHHHhhcc
Q 019718           47 TYLLEPLWWAGMVT---MIVGEVANFVAYVYAPAVLVTPLG-ALSIIIRYAVLAHFMLKERLQKMGI----LGCITCIVG  118 (336)
Q Consensus        47 ~~~~~p~W~~G~~~---~~~g~~~~~~al~~ap~slV~Pl~-a~~lv~~~~~la~~~l~e~~~~~~~----~G~~li~~G  118 (336)
                      +.+.-..|..|+..   -.+|+..|+-|......|--.|+. +.+++-+ .+++-+.++|=-+....    .+.++++.|
T Consensus        52 p~~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~-sL~gV~~f~EW~t~~~~IlG~iAliliviG  130 (288)
T COG4975          52 PELTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGT-SLFGVFVFHEWTTPTQIILGFIALILIVIG  130 (288)
T ss_pred             CccchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhc-eeeeEEEEeccCcchhHHHHHHHHHHHHHh
Confidence            44445667777755   447888888999999999999996 6789999 99999999998776653    477888899


Q ss_pred             eeEEEEecCCCCCCCCHHHHHHHhcChhHHHHHHHHHHHHHHHhheecccCCCcchhhHHHHHHhhhhHHHHHHHHHHHH
Q 019718          119 SVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIA  198 (336)
Q Consensus       119 ~~lvv~~~~~~~~~~t~~el~~~~~~~~fl~y~~~~~~~~~~li~~~~~~~g~~~~~~y~~isgllgg~tvl~~K~v~~~  198 (336)
                      ..+-..-.+.+.+..+.+.+.+-..   .+.|.     -+.+..|.+.++.     +.       +.|.++++-++++..
T Consensus       131 ~~lTs~~~~~nk~~~~~~n~kkgi~---~L~iS-----t~GYv~yvvl~~~-----f~-------v~g~saiLPqAiGMv  190 (288)
T COG4975         131 IYLTSKQDRNNKEEENPSNLKKGIV---ILLIS-----TLGYVGYVVLFQL-----FD-------VDGLSAILPQAIGMV  190 (288)
T ss_pred             heEeeeeccccccccChHhhhhhee---eeeee-----ccceeeeEeeecc-----cc-------ccchhhhhHHHHHHH
Confidence            8777665554444445554443111   00000     0011111121221     00       556677777776664


Q ss_pred             HHHh---hcCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhhHHHHHHHHHHHHHHHHhcccCCCChhHH
Q 019718          199 IKLT---LDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGI  275 (336)
Q Consensus       199 l~~~---~~g~~~f~~~~~y~ll~~~v~~~~~Q~~~Ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~  275 (336)
                      +-..   ..+.+...+-.+|.-+...+.=+.--+.++-.+=+.+-++- ..+-+.. .+.+.++|+.+++|..  +..++
T Consensus       191 ~~ali~~~~~~~~~~~K~t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~-FSlSQlg-ViisTiGGIl~L~ekK--tkkEm  266 (288)
T COG4975         191 IGALILGFFKMEKRFNKYTWLNIIPGLIWAIGNLFMLLAAQKVGVATS-FSLSQLG-VIISTIGGILFLGEKK--TKKEM  266 (288)
T ss_pred             HHHHHHhhcccccchHHHHHHHHhhHHHHHhhHHHHHHhhhhhceeee-eeHhhhe-eeeeecceEEEEeccC--chhhh
Confidence            4211   22334455556666554444333322223222112222210 0011111 1236678999999965  58899


Q ss_pred             HHHHHHHHHHHHhhhhhcccc
Q 019718          276 ASEICGFITVLSGTIILHATR  296 (336)
Q Consensus       276 ~~~~~G~~~~i~GV~lLs~~~  296 (336)
                      .....|+++++.|..+|+--|
T Consensus       267 ~~v~iGiilivvgai~lg~~K  287 (288)
T COG4975         267 VYVIIGIILIVVGAILLGIAK  287 (288)
T ss_pred             hhhhhhHHHHHHHhhhhheec
Confidence            999999999999999987544

>PRK02237 hypothetical protein; Provisional

Probab=89.41  E-value=1.2  Score=36.64  Aligned_cols=48  Identities=21%  Similarity=0.368  Sum_probs=39.6

Q ss_pred             HhhhhhhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeEEEEecCC
Q 019718           79 LVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQ  128 (336)
Q Consensus        79 lV~Pl~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lvv~~~~~  128 (336)
                      +-+.-|++-++.+ .+-....-|+|++++|++|.++|.+|+.++ .++|.
T Consensus        61 vYAAYGGvyI~~S-l~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI-~~~pR  108 (109)
T PRK02237         61 VYAAYGGVYVAGS-LLWLWVVDGVRPDRWDWIGAAICLVGMAVI-MYAPR  108 (109)
T ss_pred             HHHHhhhHHHHHH-HHHHHHhcCcCCChhHHHhHHHHHHhHHHh-eecCC
Confidence            4455677888888 889999999999999999999999998655 35554

>COG1742 Uncharacterized conserved protein [Function unknown]

Probab=89.21  E-value=2  Score=35.12  Aligned_cols=49  Identities=16%  Similarity=0.358  Sum_probs=40.2

Q ss_pred             HhhhhhhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeEEEEecCCC
Q 019718           79 LVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVIHAPQE  129 (336)
Q Consensus        79 lV~Pl~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lvv~~~~~~  129 (336)
                      +-+.-|.+-++.+ ++-....-|.+++++||.|.+.|.+|+.+ +.++|..
T Consensus        60 vYAAYGGvyI~~s-L~W~~~Vdg~~pdr~D~~Ga~icl~G~~v-il~~pR~  108 (109)
T COG1742          60 VYAAYGGVYIAAS-LAWLWVVDGVRPDRYDWIGAAICLAGVAV-ILFGPRG  108 (109)
T ss_pred             HHHHhcchHHHHH-HHHHHHHcCcCCcHHHhhhHHHHHhceee-eEeCCCC
Confidence            4566788888889 88899999999999999999999999554 4556643

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=87.97  E-value=3.1  Score=40.78  Aligned_cols=50  Identities=16%  Similarity=0.275  Sum_probs=40.6

Q ss_pred             HHhhcchhHhhhhhhhHHHHHHHHHHHHHhcccccccchhhHHHhhcceeE
Q 019718           71 AYVYAPAVLVTPLGALSIIIRYAVLAHFMLKERLQKMGILGCITCIVGSVV  121 (336)
Q Consensus        71 al~~ap~slV~Pl~a~~lv~~~~~la~~~l~e~~~~~~~~G~~li~~G~~l  121 (336)
                      ++.-.++.-..=.+.+.-++. .+++.++++|+++...++|+++++.|+.+
T Consensus       296 ~l~~~s~~t~sv~~~lk~V~~-iv~s~l~~ge~lt~~~~iG~~lii~Gv~l  345 (350)
T PTZ00343        296 CLGKVNQVTHAVANTLKRVVI-IVSSIIIFQTQVTLLGYLGMAVAILGALL  345 (350)
T ss_pred             HHhccchhHHHHHHHHHHHHH-hhhhHHHhCCCCchHhHHHHHHHHHHHHH
Confidence            455555555566666777888 89999999999999999999999999754

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=87.85  E-value=0.82  Score=37.61  Aligned_cols=76  Identities=18%  Similarity=0.281  Sum_probs=62.5

Q ss_pred             ccccchhhhHHHHHHHHHHHHHHHHHHHhhcchhHhhhhh-hhHHHHHHHHHHHHHhccccc-ccchhhHHHhhcceeEE
Q 019718           45 GYTYLLEPLWWAGMVTMIVGEVANFVAYVYAPAVLVTPLG-ALSIIIRYAVLAHFMLKERLQ-KMGILGCITCIVGSVVI  122 (336)
Q Consensus        45 ~~~~~~~p~W~~G~~~~~~g~~~~~~al~~ap~slV~Pl~-a~~lv~~~~~la~~~l~e~~~-~~~~~G~~li~~G~~lv  122 (336)
                      .+.++.|...|+=+++--.|+...+.-|+-+|.++-.|+. ++++.|+ .+++..+ +|+.. ++-..|+.+++.|+.+.
T Consensus        46 ~~tl~l~w~Y~iPFllNqcgSaly~~tLa~a~islavpv~nsltfaft-a~~G~~L-GE~~~g~~a~lGt~liv~Gi~Lc  123 (125)
T KOG4831|consen   46 MKTLFLNWEYLIPFLLNQCGSALYYLTLASAPISLAVPVTNSLTFAFT-AIFGKAL-GEETQGGLALLGTSLIVFGIWLC  123 (125)
T ss_pred             HHHHHHhHHHHHHHHHHHhhHHHHHHHHhcCCceeeeeecchhHHHHH-HHHHHHh-ccccccceeehhhhHHhhhhhhe
Confidence            4566778888999999889999999999999999999985 6788888 8877665 66655 55589999999997654

>PRK13499 rhamnose-proton symporter; Provisional

Probab=83.22  E-value=6.9  Score=38.69  Aligned_cols=61  Identities=10%  Similarity=0.129  Sum_probs=48.3

Q ss_pred             HhhccccccchhhhHHHHHHHHHHHHHHHHhcccCC-CChhHHHHHHHHHHHHHHhhhhhcc
Q 019718          234 KALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSG-QDVSGIASEICGFITVLSGTIILHA  294 (336)
Q Consensus       234 ~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~-~~~~~~~~~~~G~~~~i~GV~lLs~  294 (336)
                      ++.|.--.+.-.|+..-.-.+.+.+.+.++++||.+ .+..+......|+++++.|+.+-+.
T Consensus        92 ~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~  153 (345)
T PRK13499         92 LTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGR  153 (345)
T ss_pred             HHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence            455555566778999888899999999999999972 1234455588999999999999887

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=80.90  E-value=49  Score=32.74  Aligned_cols=280  Identities=14%  Similarity=0.204  Sum_probs=146.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhHHh---h-------------hcc-----CCCccCCCccccch----hhhHHHHH-
Q 019718            5 ENSKGLILAVASSAFIGSSFILKKKGLK---R-------------AGA-----SGTRAGVGGYTYLL----EPLWWAGM-   58 (336)
Q Consensus         5 ~~~iGv~LAl~sa~~~a~G~vlqk~~~~---~-------------~~~-----~~~~~~~~~~~~~~----~p~W~~G~-   58 (336)
                      ...+|++.-.+++++.+.=.+=.||-..   |             .|-     .-|    +..++++    +-.|+.-+ 
T Consensus         4 ~ii~Gii~h~iGg~~~~sfy~P~kkvk~WsWEs~Wlv~gi~swli~P~~~a~l~ip----~~~~i~~~~~~~~l~~~~l~   79 (344)
T PF06379_consen    4 AIILGIIFHAIGGFASGSFYVPFKKVKGWSWESYWLVQGIFSWLIVPWLWALLAIP----DFFSIYSATPASTLFWTFLF   79 (344)
T ss_pred             hHHHHHHHHHHHHHHhhhhccchhhcCCccHHHHHHHHHHHHHHHHHHHHHHHhCC----cHHHHHHhCChhHHHHHHHH
Confidence            3567999999999998877776666211   0             000     000    1111221    12222221 


Q ss_pred             -HHHHHHHHHHHHHHhhcchhHhhhhh-hhHHHHHHHHHHHHHhcc-------cccccchhhHHHhhcceeEEEEecCCC
Q 019718           59 -VTMIVGEVANFVAYVYAPAVLVTPLG-ALSIIIRYAVLAHFMLKE-------RLQKMGILGCITCIVGSVVIVIHAPQE  129 (336)
Q Consensus        59 -~~~~~g~~~~~~al~~ap~slV~Pl~-a~~lv~~~~~la~~~l~e-------~~~~~~~~G~~li~~G~~lvv~~~~~~  129 (336)
                       ++-.+|.+..=.+..+.-.|+-+.+. ++..++. .++-+.+.++       +-.+..++|++++.+|+.++...+...
T Consensus        80 G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~G-Tlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~K  158 (344)
T PF06379_consen   80 GVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFG-TLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMK  158 (344)
T ss_pred             HHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHh-hchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhh
Confidence             11224444444566666666666543 3445555 5665665443       223455789999999988876655433


Q ss_pred             CCCCCHHHHHHHhcChhHHHHHHHHHHHHHHHhhe---ecc------cCCCcchhhHHHH----HHhhhhHHHHHHHHHH
Q 019718          130 HTPNSVQEIWALATQPDFLIYVAATVSVVLALVLH---FEP------RCGQTNILVYLGI----CSLMGSLTVVSIKAIG  196 (336)
Q Consensus       130 ~~~~t~~el~~~~~~~~fl~y~~~~~~~~~~li~~---~~~------~~g~~~~~~y~~i----sgllgg~tvl~~K~v~  196 (336)
                      ++..+.+. .+.--+...+ -.++..++...+.+-   -.|      +.|..  ..|...    --+.||++.-+.=++-
T Consensus       159 e~~~~~~~-~efn~~kGl~-iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~--~l~~~l~~~vvv~~GGf~tN~~yc~~  234 (344)
T PF06379_consen  159 EKELGEEA-KEFNFKKGLI-IAVLSGVMSACFNFGLDAGKPIHEAAVAAGVN--PLYANLPVYVVVLWGGFITNLIYCLI  234 (344)
T ss_pred             hhhhccch-hhhhhhhhHH-HHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCC--cHHHhCchhhhhhhhHHHHHHHHHHH
Confidence            33222221 1110111111 111222222221111   111      12211  122111    1145566655555544


Q ss_pred             HHHHH-hhc--CCcccchh---HHHHHHHHHHHHHHHHHHHHHHhhcccc-c--cchhhhHHHHHHHHHHHHHHHHhccc
Q 019718          197 IAIKL-TLD--GISQIAYP---QTWFFLTVAAVCVVTQLNYLNKALDTFN-A--AIVSPVYYVMFTTLTIIASAIMFKDW  267 (336)
Q Consensus       197 ~~l~~-~~~--g~~~f~~~---~~y~ll~~~v~~~~~Q~~~Ln~aL~~~~-~--~~v~P~~~v~~~~~~i~~G~i~f~E~  267 (336)
                      ...+. +.+  ++.....+   .-|++.+..-+.=..|..+.-.+-..-. .  ...-++...+..+++-+.|. ..+||
T Consensus       235 ~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl-~lkEW  313 (344)
T PF06379_consen  235 LLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVLWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGL-ILKEW  313 (344)
T ss_pred             HHhhcCCCccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHH-HHHHh
Confidence            43321 121  12111122   2266666666667788888887654322 2  45677888888888888775 67999


Q ss_pred             CCCChhHHHHHHHHHHHHHHhhhhhcc
Q 019718          268 SGQDVSGIASEICGFITVLSGTIILHA  294 (336)
Q Consensus       268 ~~~~~~~~~~~~~G~~~~i~GV~lLs~  294 (336)
                      .+.+......+.+|+++++..++++.-
T Consensus       314 Kg~s~kt~~vl~~G~~vlI~s~~ivG~  340 (344)
T PF06379_consen  314 KGASKKTIRVLVLGIAVLILSVVIVGY  340 (344)
T ss_pred             ccCCcccHHHHHHHHHHHHHHHHHHhc
Confidence            999988888899999999998887653

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	336
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.1 bits (103), Expect = 5e-05
 Identities = 54/352 (15%), Positives = 98/352 (27%), Gaps = 91/352 (25%)

Query: 31  LKRAGASGTRAGVGG-----YTYLLEPLWWAGMVTMIVGEVANFVAYVYAPAVLVTPLGA 85
           L        +  V       Y +L+ P+      T           Y+     L      
Sbjct: 71  LLSKQEEMVQKFVEEVLRINYKFLMSPI-----KTEQRQPSMMTRMYIEQRDRL---YND 122

Query: 86  LSIIIRYAVL---AHFMLKERLQKM---------GILGC-ITCIVGSVV----IVIHAP- 127
             +  +Y V     +  L++ L ++         G+LG   T +   V     +      
Sbjct: 123 NQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDF 182

Query: 128 --------QEHTPNSVQEI-WALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYL 178
                     ++P +V E+   L  Q D      +  S  + L +H      Q  +   L
Sbjct: 183 KIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSI----QAELRRLL 238

Query: 179 GICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTW--FFLTVAAVC---VVTQLNYLN 233
                   L             L L  +      + W  F L+    C   + T+     
Sbjct: 239 KSKPYENCL-------------LVLLNVQ---NAKAWNAFNLS----CKILLTTR----F 274

Query: 234 KAL-DTFNAAIVSPVYYVMFT-TLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTII 291
           K + D  +AA  + +     + TLT      +   +       +  E+         +II
Sbjct: 275 KQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLT-TNPRRLSII 333

Query: 292 LHATREHEQTTAPVGTVTW----YVSGDSLKGAEE---EHLITIHNSDYYVQ 336
             + R+           TW    +V+ D L    E     L        + +
Sbjct: 334 AESIRDG--------LATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDR 377

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	336
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.69
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.49
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	97.78
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	97.43

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.69  E-value=6.9e-08  Score=78.37  Aligned_cols=98  Identities=14%  Similarity=0.114  Sum_probs=82.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhHHhhhccCCCccCCCccccchhhhHHHHHHHHHHHHHHHHHHHhhcchhHhhhh-hhhHHH
Q 019718           11 ILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTMIVGEVANFVAYVYAPAVLVTPL-GALSII   89 (336)
Q Consensus        11 ~LAl~sa~~~a~G~vlqk~~~~~~~~~~~~~~~~~~~~~~~p~W~~G~~~~~~g~~~~~~al~~ap~slV~Pl-~a~~lv   89 (336)
                      .+-+++.++-+.|....|++.      +         ..+.+.++.+..++.+++.+...++...|.+.+-|+ .+++.+
T Consensus         5 l~l~~a~~~e~~~~~~lK~s~------~---------~~~~~~~~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v   69 (110)
T 3b5d_A            5 IYLGGAILAEVIGTTLMKFSE------G---------FTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIV   69 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhcc------C---------cchHHHHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHH
Confidence            445667788888888888852      1         012345677788899999999999999999999999 899999


Q ss_pred             HHHHHHHHHHhcccccccchhhHHHhhcceeEEEE
Q 019718           90 IRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVI  124 (336)
Q Consensus        90 ~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lvv~  124 (336)
                      ++ .+++.+++||+++..++.|+.++++|++++..
T Consensus        70 ~~-~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~  103 (110)
T 3b5d_A           70 LI-SLLSWGFFGQRLDLPAIIGMMLICAGVLIINL  103 (110)
T ss_pred             HH-HHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            99 99999999999999999999999999877644

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.49  E-value=8e-08  Score=81.16  Aligned_cols=98  Identities=14%  Similarity=0.114  Sum_probs=66.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhHHhhhccCCCccCCCccccchhhhHHHHHHHHHHHHHHHHHHHhhcchhHhhhh-hhhHHH
Q 019718           11 ILAVASSAFIGSSFILKKKGLKRAGASGTRAGVGGYTYLLEPLWWAGMVTMIVGEVANFVAYVYAPAVLVTPL-GALSII   89 (336)
Q Consensus        11 ~LAl~sa~~~a~G~vlqk~~~~~~~~~~~~~~~~~~~~~~~p~W~~G~~~~~~g~~~~~~al~~ap~slV~Pl-~a~~lv   89 (336)
                      ++-+++.++-+.|..+.|++.      +         ..+.+.++.|.+++++++.++..++...|++.+.|+ .+++.+
T Consensus         5 l~Ll~ail~ev~~~~~lK~s~------g---------~~~~~~~~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv   69 (137)
T 2i68_A            5 IYLGGAILAEVIGTTLMKFSE------G---------FTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIV   69 (137)
T ss_dssp             HHHHHHHHHHHHHHHHC---------------------------CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhc------c---------cchHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHH
Confidence            344567777888888888862      0         012344578888999999999999999999999999 899999


Q ss_pred             HHHHHHHHHHhcccccccchhhHHHhhcceeEEEE
Q 019718           90 IRYAVLAHFMLKERLQKMGILGCITCIVGSVVIVI  124 (336)
Q Consensus        90 ~~~~~la~~~l~e~~~~~~~~G~~li~~G~~lvv~  124 (336)
                      ++ .+++.+++||+++..+++|++++++|++++..
T Consensus        70 ~~-~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~  103 (137)
T 2i68_A           70 LI-SLLSWGFFGQRLDLPAIIGMMLICAGVLIINL  103 (137)
T ss_dssp             HH-HHHHHHHHC------CHHHHHHHHHHHHHHHH
T ss_pred             HH-HHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            99 99999999999999999999999999877643

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=97.78  E-value=6.5e-05  Score=63.21  Aligned_cols=68  Identities=16%  Similarity=0.278  Sum_probs=46.6

Q ss_pred             HHHHHHHHHHHHhhccccccchhhhHHHHHHHHHHHHHHHHhcccCCCChhHHHHHHHHHHHHHHhhhhhcccc
Q 019718          223 VCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATR  296 (336)
Q Consensus       223 ~~~~~Q~~~Ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~~~i~GV~lLs~~~  296 (336)
                      ++...-..++++++++.|++..+|+....-++.+.+.|.++|+|...  +.+    .+|.++++.||+++...+
T Consensus        38 ~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls--~~~----~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLD--LPA----IIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC--------C----HHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCC--HHH----HHHHHHHHHHHHHHhcCC
Confidence            34444456899999999999999998888899999999999999553  433    578888999999998654

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=97.43  E-value=0.0017  Score=52.18  Aligned_cols=67  Identities=18%  Similarity=0.289  Sum_probs=55.1

Q ss_pred             HHHHHHHHHHHhhccccccchhhhHHHHHHHHHHHHHHHHhcccCCCChhHHHHHHHHHHHHHHhhhhhcccc
Q 019718          224 CVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATR  296 (336)
Q Consensus       224 ~~~~Q~~~Ln~aL~~~~~~~v~P~~~v~~~~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~~~i~GV~lLs~~~  296 (336)
                      +...-..++++++|+.|.+..+|+....-++.+.+.|.++|+|..  ++.+    .+|..+++.||++++..+
T Consensus        39 ~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~--s~~~----~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           39 CYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRL--DLPA----IIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCC--CHHH----HHHHHHHHHHHHHHhcCC
Confidence            334445688999999999999999888999999999999999954  4544    578888999999998654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00